LOCUS       DTVW01000001            1240 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1000864, whole
            genome shotgun sequence.
ACCESSION   DTVW01000001 DTVW01000000
VERSION     DTVW01000001.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1240)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1240)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1240
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1000864"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>1240
                     /gene="alaS"
                     /locus_tag="EYO87_00005"
     CDS             <1..>1240
                     /gene="alaS"
                     /locus_tag="EYO87_00005"
                     /EC_number="6.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_353524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase"
                     /protein_id="HIC64388.1"
                     /translation="TFFEMLGNFSFGDYFKSEAIAFAWELLTRDFGLSRDRLLVTVYH
                     TDDEAANIWKKVAGLPDDRIIRIATADNFWQMGPTGPCGPCTEIFYDHGDHIWGGPPG
                     SAEEDGDRFIEIWNLVFMQNEQFEDGSMRALDMQSIDTGMGLERIGALLQGKHDNYDT
                     DLMRSLIEASAHATSVDPDGSGKVHHRVIADHLRSTGFLIADGVMPSNEGRGYVLRRI
                     MRRAMRHAHMLGAQDPVMYRLVPALVGQMGTAYPELTRAQPLIEETLRSEETRFRQTL
                     DRGLRLLDEEVAKLPEGANLPGEAAFKLYDTYGFPLDLTQDALREKGRAVDISGFDAA
                     MAEQKAKARAAWAGSGETKDAAIWHDLAERHGATEFLGYDTDEAEGQILALVVEGAEA
                     SEATEGAEVQIVVNQSPFYAE"
BASE COUNT          241 a          360 c          419 g          220 t
ORIGIN      
        1 accttctttg aaatgctggg caatttcagc tttggcgact atttcaaatc cgaggccatc
       61 gccttcgcct gggaattgct gacccgggat ttcgggctgt ccagggacag gctgctggtc
      121 acggtctatc ataccgatga cgaggccgcg aatatctgga aaaaggtggc cggattgccg
      181 gacgaccgca tcatccgcat cgccacggcc gataatttct ggcagatggg tccgaccggt
      241 ccctgcggcc cctgcaccga aatcttctac gatcacggcg atcacatctg gggcgggccg
      301 ccgggttcgg ccgaggaaga cggcgaccgc ttcatcgaga tctggaacct tgtcttcatg
      361 cagaacgagc aattcgagga cggctcgatg cgcgcgctcg acatgcaatc catcgacacc
      421 ggcatgggac tggaacggat cggtgcgctc ttgcaaggca agcacgacaa ttatgacacc
      481 gatctgatgc gcagcctgat cgaagccagc gcccatgcca cgagcgtcga tccggacggc
      541 tcgggcaagg tgcatcaccg ggtgatcgcg gatcatctgc gttcgaccgg cttcctgatc
      601 gcggatgggg tcatgccctc gaacgagggg cgcggctatg tgctgcggcg catcatgcgg
      661 cgcgcgatgc gtcacgcgca catgctgggt gcgcaggatc cggtgatgta tcggctggtc
      721 ccggccctgg tcgggcagat gggcacggcc tatccggaac tgacccgcgc gcagccgctg
      781 atcgaagaga ccctgcgcag cgaggaaacc cggttccggc agactctgga ccggggattg
      841 cggctgctgg acgaggaagt ggcaaagctg ccggagggcg cgaatctgcc gggcgaggcg
      901 gccttcaagc tgtatgatac ctatggtttc ccgctggatc tgacacagga tgccttgcgt
      961 gaaaaaggcc gcgcggtcga catcagcggc tttgatgccg cgatggccga acagaaggcc
     1021 aaggcccgcg cggcctgggc gggcagcggc gagacgaagg acgcagcgat ctggcatgat
     1081 ctggccgaac gtcatggcgc gaccgaattt ctgggctatg acaccgacga ggcggaaggt
     1141 cagatcctgg ctctggtggt ggagggggcc gaggcttcgg aagcgaccga gggcgcagag
     1201 gttcagatcg tcgtgaacca gtcgcccttc tatgccgaat
//
LOCUS       DTVW01000002            2415 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1003424, whole
            genome shotgun sequence.
ACCESSION   DTVW01000002 DTVW01000000
VERSION     DTVW01000002.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2415)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2415)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2415
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1003424"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..230)
                     /locus_tag="EYO87_00010"
     CDS             complement(<1..230)
                     /locus_tag="EYO87_00010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter TctB
                     family protein"
                     /protein_id="HIC64389.1"
                     /translation="MTDRLAGLAFFVLAAGYVWLSAGYTAGFGDPLGPAIFPRVIGIP
                     AILLGLTLIIWPAHNAEWAGSAGLARQAAAMA"
     gene            complement(227..1192)
                     /locus_tag="EYO87_00015"
     CDS             complement(227..1192)
                     /locus_tag="EYO87_00015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005979724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HIC64390.1"
                     /translation="MIWKLNGLKVAGIGAAMLFALPALGAECIAPADPGGGWDFTCRE
                     VGRLLSEEKLVDGNVQVTNMPGGVGAVAWANVASKRADDPELIVATSTVGVTQIAQGK
                     YPSDIGTMRWLAMLGADVGIIAVAKDSPYESLDQLLEALKADPASVVTSGSTGAGGWD
                     HIRLMMLAQAAGIEDLTGIRWVQFDGGGPAVTQMMGGQVQVVSADLGEIKGFVESGDI
                     RVLAVLSDQPVSAFPDLPTAKSQGYDVTGYNWRGFYTGGDVSDEDYQAWVDKLQKLYE
                     SDGWQETARSSGLEPIWRGGQEFADYVAQQEKEMADISRRIGVIQ"
     gene            complement(1226..1912)
                     /locus_tag="EYO87_00020"
     CDS             complement(1226..1912)
                     /locus_tag="EYO87_00020"
                     /inference="COORDINATES: protein motif:HMM:PF07729.10"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HIC64391.1"
                     /translation="MTAQTSIGETNGDRDLLSRLRFAILSLDLVPGEAISERALEARF
                     AVSRTPIREALFNLVRDGLVVREGRSYAIAPFDIDEIDEVFAFRDIVEPQAVRLAARL
                     AHPDEIVSIRHSINFSHDEFTPERWLDMALDFHVRCAALSRNRCITAAMQDVTTRTLR
                     ARWLSFASDEGRATTHRDHSRILDLIAAGDGDGAARAVLAHSADVRLEVLDTIRNARR
                     FIGRRGVVGG"
     gene            1987..>2415
                     /locus_tag="EYO87_00025"
     CDS             1987..>2415
                     /locus_tag="EYO87_00025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007007244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylglutaryl-CoA lyase"
                     /protein_id="HIC64392.1"
                     /translation="MQNRVAGFPDRAVITEVGPRDGLQSEPAFVPTKRKIALVQALLD
                     AGLRRFEVTSFVSPRAVPQMRDAAEVMAAFRDRQDAHLTALVPNARGAAAAIEAGVDA
                     MVLFASASESHNLKNVNRSRAESLKGFAEIAALAQGTGVAL"
BASE COUNT          411 a          830 c          780 g          394 t
ORIGIN      
        1 atcgccatcg ccgccgcctg ccgcgcaagg ccggccgaac cggcccattc ggcgttgtgg
       61 gcaggccaga tgatcagcgt caggcccagc aggatggccg ggataccgat cacgcgcgga
      121 aagatggcag gccccagcgg atcgccgaag cctgccgtgt atccggccga cagccagaca
      181 tagccggccg ccagcacgaa aaaagccagt ccggccagcc ggtctgtcac tgaatgaccc
      241 cgatccggcg cgagatatcg gccatctcct tttcctgttg ggcgacatag tcggcgaatt
      301 cctggccgcc gcgccagatc ggctccagtc cgctggacct ggcggtttcc tgccagccgt
      361 cggattcata gagtttttgc agcttgtcca cccaggcctg gtaatcctcg tcgctgacat
      421 cgcccccggt atagaagccg cgccagttgt agccggtcac gtcgtagcct tgcgacttgg
      481 ccgtgggcag gtccggaaag gccgagaccg gctggtccga cagcacagcc agaacccgga
      541 tatcgcccga ttcgacaaag cccttgatct cacccaggtc ggccgagacg acctgcacct
      601 gaccgcccat catctgcgtc accgccgggc cgccgccgtc gaactgcacc cagcggatgc
      661 cggtcagatc ctcgataccc gcggcctgcg ccagcatcat caggcggata tgatcccagc
      721 cgcccgcccc ggtcgaaccc gaggtgacga ccgaggccgg atcggccttc agcgcctcca
      781 gcagctggtc cagcgactcg taggggctgt ccttggcgac cgcgatgatg ccgacatcgg
      841 cgcccagcat cgccagccag cgcatcgtgc cgatatccga ggggtatttg ccctgcgcga
      901 tctgcgtcac gccgacggtc gaggtggcga cgatcaattc gggatcgtcg gcccgcttcg
      961 aggccacatt ggcccatgcc accgcgccca cgccgcccgg catgttcgtc acctgaacgt
     1021 tgccgtcgac cagcttttcc tcggacagaa ggcggccgac ctcgcggcag gtaaagtccc
     1081 agccgccgcc gggatcggcc ggggcgatgc attcggcgcc cagggcgggc agggcgaaca
     1141 gcatcgccgc cccgatcccc gcgaccttca atccgttcag tttccagatc atccttgtcc
     1201 tccctcgatg atgatgatgg ttcgtctagc cgccgacgac tccgcgacga ccgataaagc
     1261 gtcgtgcgtt ccggatcgtg tcaagaactt ccagccgcac atcggcggaa tgggccagga
     1321 ccgcgcgggc ggcaccgtcg ccgtcgcccg cagcgatcag gtccaggatc cggctgtggt
     1381 cgcgatgcgt cgtggcgcgg ccttcgtcgg atgcaaagct gagccagcgc gcccgcagcg
     1441 tccgcgtggt cacgtcctgc atcgccgccg tgatgcagcg attgcgcgac agggcggcgc
     1501 agcggacatg aaagtccaga gccatgtcca gccagcgttc cggcgtgaac tcgtcatggc
     1561 tgaaattgat gctgtggcga atggagacga tctcgtccgg atgcgccagg cgcgcggcca
     1621 gcctgacggc ctgcggctcg acgatgtcac gaaaggcgaa aacctcgtcg atctcgtcga
     1681 tgtcgaaggg ggcgatggca tagctgcgcc cctcgcgcac caccagcccg tcgcggacca
     1741 gattgaacag cgcctcgcgg atcggggtgc gcgagaccgc gaacctggcc tccagcgcgc
     1801 gttcgctgat cgcttcgccc ggtaccagat ccagcgacag gatcgcaaaa cgcagccgcg
     1861 acagcagatc gcggtcgccg ttcgtctcgc cgatgctcgt ctgtgccgtc attgacgcct
     1921 ccccatccgt tggtataccg gtctggcatt caattgcaac gctgttggcc aacaaagggg
     1981 gttcggatgc agaacagggt ggcgggcttt cccgatcgtg ccgtgatcac cgaggtcggg
     2041 ccgcgtgacg ggctgcaatc cgagccggcc ttcgtgccga caaagcgcaa gatcgcgctg
     2101 gtccaggcgc tgctggatgc cgggctgcgg cggttcgagg tgacatcctt cgtctcgccc
     2161 cgcgcggtgc cgcagatgcg cgatgccgcc gaggtgatgg ccgcgttccg cgaccgccag
     2221 gacgcgcatc tgacggcgct tgtgcccaat gcgcgcggcg cggcggcggc aatcgaggcg
     2281 ggcgtggatg caatggtgct gttcgcctcg gcctcggaaa gccacaatct gaagaacgtg
     2341 aaccgcagcc gagccgaatc gctgaagggt ttcgccgaga ttgccgcgct ggcccagggc
     2401 accggcgtcg cgctg
//
LOCUS       DTVW01000003            2005 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1003495, whole
            genome shotgun sequence.
ACCESSION   DTVW01000003 DTVW01000000
VERSION     DTVW01000003.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2005)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2005)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2005
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1003495"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(1..182)
                     /locus_tag="EYO87_00030"
                     /pseudo
     CDS             complement(1..182)
                     /locus_tag="EYO87_00030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007814146.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease"
     gene            complement(365..1483)
                     /locus_tag="EYO87_00035"
     CDS             complement(365..1483)
                     /locus_tag="EYO87_00035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020041134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C4-dicarboxylate ABC transporter"
                     /protein_id="HIC64393.1"
                     /translation="MTFKTLTAASLAALVLGAGSAMAETWRYAFEEAMDEVQGKFAQK
                     FKEEIEANSDNEVQLFPFGTLGESADIMEQAQSGILQFVDQSPGFTGALIPEAQVFFV
                     PYLLPQDQDTLVSFFRNSKAINELFPPLYADQGLELLTMFPEGEVMMTTTTPVKSPAD
                     LNEVKFRVMTNPLLVESYKAFGATPTPLPWGEVYGALQTGIIQGQENPAFFIESTKMY
                     EVTDYITRAGHNNFTTAVMANKEFFDGLSDENKKVVRDAISASFDYIVDYQKGLTEES
                     LNKIKEAKPSITINTLTEEERKPFKETAADVEAQFLEIGGSQAQAILDQMKADLEAAG
                     SGDAAAAAGGSDAAAATGGGDSAAAPAEGTTETAPAGN"
BASE COUNT          334 a          637 c          648 g          386 t
ORIGIN      
        1 atgatcagcg cctggttcag ttcctcggaa aagaagatgc tctggcccag aaggtagcga
       61 ccgacgacat tggccatggt gttcagcgcc atcagcagga ccccgattgc cagcagcacc
      121 gcctcgatcc gggcgatggc cacatcaatc gcgcccagcg gtccgggcag tcccgaaaca
      181 tatttggaat cgtcgatatc gtcatcgccg cccgccattt cggccgcggc gacgatatcg
      241 ggatcgggct tgggggcatg cttgtcgtca agcgtcatgg ccgggatccc atgctgtgaa
      301 cggataacct gcatgggacc ggccacgcat gtggccggat cccctgtcgt ggcacgggcc
      361 ggggctagtt gccggccggg gcggtctcgg tcgtgccctc cgccggggcc gcggcgctgt
      421 caccgccccc ggtcgcggcg gcggcgtcac tgccgccagc cgcggcggcc gcgtcgccac
      481 tgcccgcggc ttccagatcg gccttcatct ggtccaggat cgcctgggcc tgcgatccgc
      541 cgatctcgag gaactgcgcc tcgacatcgg ccgccgtctc cttgaagggc ttgcgctctt
      601 cttcggtcag cgtgttgatc gtgatcgagg gcttggcttc cttgatcttg ttcagcgatt
      661 cctcggtcag acccttctga taatcgacga tatagtcgaa cgaggccgaa atcgcgtccc
      721 gaaccacctt cttgttttcg tcggacaggc cgtcgaagaa ttccttgttg gccatgacgg
      781 cggtggtgaa gttgttgtgg ccggcgcggg tgatgtagtc ggtcacctcg tacatcttcg
      841 tcgattcgat gaagaaggcg ggattttcct gaccctggat gatgccggtc tgcagcgcgc
      901 cgtaaacctc gccccagggc agcggcgtgg gcgtcgcgcc aaaggccttg tagctttcga
      961 ccagcagcgg attggtcatc acgcggaact tgacctcgtt cagatcggcc gggctcttga
     1021 ccggcgtggt cgtggtcatc atcacctcgc cctccgggaa catggtcaga agctcaagac
     1081 cctgatcggc gtaaagcggc ggaaacagct cgttgatggc cttggaattg cggaagaagc
     1141 tgaccagcgt atcctgatcc tggggcagca gatagggcac gaagaagacc tgggcctcgg
     1201 ggatcagcgc gccggtaaag ccgggggact gatcgacgaa ttgcaggatg cccgattgcg
     1261 cctgttccat gatgtcggcc gattcgccca gcgttccgaa cgggaacagc tgaacctcgt
     1321 tgtcggaatt ggcctcgatc tcttccttga acttctgggc gaacttgccc tgaacctcgt
     1381 ccatcgcctc ttcgaaggca tagcgccagg tttcggccat ggcggaaccc gcgcccagaa
     1441 ccagggcggc aaggctggcg gcggtcaatg tcttgaaagt catgtgttct cctgttgatg
     1501 ggcctccctg acgcaacggc gcaaggaacc tcgggtttgc aggttccggg tcgttcctgc
     1561 ccggactggc ttgtctcgac agttcggacc aagccctttg catgtcaatt tctatattaa
     1621 atcatgacaa ttcgggggcc gggtgtcaaa cggatggtcc gggacggccc gcgggccgac
     1681 tttcgggcag gatcccggcc aggatcgaaa gcccccgttc catctctcgc aagggcgccg
     1741 cgccgaggca gatccgcagc gccggatcgc ggtcggtgac ggcaaagccg ctgcccggcg
     1801 ccaccgccac gccgcggtcc agcgcgcggt ccagcaacgc gcgttcgtcg gtgcccggcg
     1861 gcagcggcag ccaacggtgc aggccatgcg gaaagcccgc gctgcgcccg tccagcagac
     1921 gctgcgccag ccggttgcgg cccgcaagct cgattcgttg gcgtccgcgc cggcggacag
     1981 cagcagccgg gccgcgtcga tgttc
//
LOCUS       DTVW01000004            2613 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1006640, whole
            genome shotgun sequence.
ACCESSION   DTVW01000004 DTVW01000000
VERSION     DTVW01000004.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2613)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2613)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2613
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1006640"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..2240)
                     /locus_tag="EYO87_00040"
     CDS             complement(<1..2240)
                     /locus_tag="EYO87_00040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015921365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HIC64394.1"
                     /translation="MSIKASIYHLTHYRYDRPVSLGPQIIRLRPAPHSRTRVLSHSLK
                     VSPADHFVNHQQDPFGNWLARFVFPEPVRELKIEVDLVADMSIHNPFDFFVEDSADQW
                     PFDYAPDLAEELVPYRQAEPAGPLLRKLLDSIPRQKTRTVDFVVNLNARIAGETGYTI
                     RMEPGVQTPEETLSLKSGSCRDSSWLLVNALRHLGFAARFVSGYLIQLKPDLKALDGP
                     SGTEVDFTDLHAWAEVYLPGAGWIGLDPTSGLLTGESHIPLAAAPHYRSCAPISGAAS
                     FAEVDFNFDMQVRRVAEHPRITKPFSDEAWASLDRLGETVDAALRKGDVRLTMGGEPT
                     FVSIDDFESEEWNTAAVGPTKRVLADKLVRRLRKRFAPNGFLHYGQGKWYPGETLPRW
                     TFSIYWRRDGQPVWQNPDLIAQEVDEGAVTPLQAQELLREVARELDVSDANVMPAYED
                     PAEWLVREAKLPPNVTPENSKLDDTEERHRIAAVFDRGLTEPVGFVLPVQSWQSKSHL
                     RWYSEKWRLRRGHVFLVPGDSPVGYRLPLNSLPWLPPSVYPYINPTDPAVDRPPLADP
                     SPIPPARKSQPMASFVAGGPVQGVVEQGQPRGDGEHDLSGLVRTALSVEPKNGRLCVF
                     MPPVATLEEYLDLLRAVEAAALRLDLKVHVEGYAPPHDPRLNVIRVAPDPGVIEVNIH
                     PAESWQDCVRITQGVYDDARQSRLGAEKFMIDGKHAGTGGGNHVVVGGATTNDSPFLR
                     RPDLLA"
BASE COUNT          433 a          838 c          900 g          442 t
ORIGIN      
        1 ctggccagca gatccgggcg gcgcaagaac ggactgtcat tcgtggtcgc gccgcccacg
       61 acgacatggt tgccgccgcc ggtgccggca tgcttgccgt cgatcatgaa tttctcggcc
      121 cccagccgcg actggcgggc atcgtcatag acgccctgcg tgatccggac gcaatcctgc
      181 cagctttcgg cgggatggat gttcacctcg atcacgccgg gatcgggggc gacacggatc
      241 acgttcagcc gcggatcgtg cggcggcgca tagccttcga catggacctt cagatccagc
      301 cgcagggcgg cggcctcgac cgcgcgcagc agatccaggt attcctccag cgtggcgacg
      361 gggggcatga acacgcagag ccggccgttc ttgggctcga ccgacagcgc ggtgcgaacc
      421 agcccggaca ggtcgtgttc gccatcgccc cggggctggc cctgttcgac gaccccctga
      481 accgggccgc cggccacgaa actggccatc ggctgggact tgcgcgccgg cgggatcggc
      541 gacggatcgg ccaggggcgg gcggtccacg gcgggatcgg tcgggttgat atagggatag
      601 accgagggtg gcagccaggg cagcgaattc agcggcaggc gatagccgac cgggctgtcg
      661 ccgggcacca ggaagacatg tccgcgccgc agccgccact tttccgaata ccagcgcagg
      721 tgggatttcg attgccagct ttgcaccggc agcacgaagc cgacgggttc ggtcaggccg
      781 cgatcgaaga cggcggcgat gcggtgccgt tcctcggtat cgtcgagctt cgagttttcg
      841 ggcgtcacgt tgggcggcag cttcgcttcg cgcaccagcc attcggccgg gtcttcatag
      901 gcgggcatga cattggcgtc gctgacatcc agttcccgcg cgacctcgcg cagcaattcc
      961 tgcgcctgca acggcgtgac cgcgccctcg tcgacctctt gcgcgatcag gtcggggttc
     1021 tgccagaccg gctggccgtc ccgccgccag tagatcgaga aggtccatcg cggcagggtt
     1081 tcgcccggat accatttgcc ttgcccgtaa tgcagaaatc cgttcggtgc gaaacgcttg
     1141 cgcagcctgc gaaccagctt gtcggccagg acgcgcttgg tcgggccgac ggcggcggtg
     1201 ttccattcct cgctttcgaa gtcgtcgatc gacacgaagg tcggctcgcc gcccatggtc
     1261 aggcgcacat cgcccttgcg cagggcggca tcgacggtct cgcccagccg gtccaggctg
     1321 gcccatgcct cgtcgctgaa cggtttggta atgcgcggat gctcggccac ccggcgcacc
     1381 tgcatgtcga agttgaaatc gacctcggca aagctggccg cgccgctgat cggggcgcag
     1441 gaccggtaat gcggcgcggc ggccagcggg atatggcttt caccggtcag caggccggat
     1501 gtcggatcca gcccgatcca gcccgcgccg ggcagataga cctcggccca ggcatgaagg
     1561 tcggtgaaat cgacctcggt gcccgaggga ccgtccagcg ccttcaggtc gggcttcaac
     1621 tggatcagat agcccgacac gaagcgcgcc gcgaaaccca ggtggcgcag ggcattgacc
     1681 agcagccagc tggaatcgcg gcaggatccg cttttcagcg acagcgtttc ctcgggcgtc
     1741 tggacgcccg gctccatccg gatcgtatag ccggtttcgc ccgcgatccg ggcattcagg
     1801 ttgaccacga aatcgactgt tcgggtcttc tggcgcggga tgctgtccag cagcttgcgc
     1861 agcagcggtc ccgccggttc ggcctgccgg tagggcacca gctcctcggc caggtcgggg
     1921 gcgtaatcga aaggccattg gtcggcgctg tcctcgacga agaagtcgaa cgggttgtgg
     1981 atgctcatgt ccgcgaccag atcgacctcg atcttcaatt cgcgcaccgg ttcgggaaag
     2041 acgaagcggg ccagccagtt tccaaaggga tcctgctggt gattgacgaa atgatccgcg
     2101 ggcgagactt tcagcgaatg cgacagcacc cgggtgcgcg aatgcggcgc cggccgcagg
     2161 cggatgatct gtggacccag gctgaccggg cggtcgtatc tgtagtgggt caggtggtag
     2221 atgctggcct tgatcgacat gatccgtccc tgttcggctt ttgctcagct tacacaatgc
     2281 gcagccgagg gcgagacaca aagccggctt gtccttgccg gcgtgccggc aggggcgctg
     2341 cccctcttgg cctgcggcca attcaccccg aggtatttgg caagagcgcg aggcggccga
     2401 gggcatcctg cagccggtcc cattcggcgg cgctgccggg aatgccaagg cgaagccagt
     2461 ggcgcgaata ggggaagcgg cgggtccaga tacgggcatg ggccaggccg tcgcgcgcct
     2521 gtccagcatc cggcgtgtca taaaggcgga acaggtgagt gccgcccagg ggctgccatc
     2581 cggcgcgctg cgccacatgg tccagatgca ggc
//
LOCUS       DTVW01000005            1353 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1009929, whole
            genome shotgun sequence.
ACCESSION   DTVW01000005 DTVW01000000
VERSION     DTVW01000005.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1353)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1353)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1353
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1009929"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            184..1140
                     /locus_tag="EYO87_00045"
     CDS             184..1140
                     /locus_tag="EYO87_00045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64395.1"
                     /translation="MGRSCREIQEWVEEQVERPIEEWEQRQEQRCREEPCKWWMLCLN
                     KLFCWLVWVAVKVVRWVVVTIGKWVVRVVCTIVNVILDVIAFVIGLILSIPVIGGIIR
                     TVLNWLTEIVWRLVGILDFVASLAGIRPRKKMYFGIIIPVIDGTPLATEAALQPQVDA
                     VIEIYDRTCNIDARFTGFCQTRVSPPGGSISVQCGAGGFFADWWVDGSWFELVQSLCK
                     FESGWRRIIGYGAELIVIVVNDIQPPSTIGCSMAGTHNYVTIEPRVARATLAHELGHA
                     CLLPHDESAGNLMNASVVGAAFPVLSNLQVAIVRGSRHVTYL"
BASE COUNT          231 a          413 c          445 g          264 t
ORIGIN      
        1 atgtcgatgc cctgcgccgc ggcgcgggca agacggatta cacccgccac ctgatcgaag
       61 cctcggcagg ctacatccgg ggctgagggc ctttcacgcc gccctcatgg cgaattcacg
      121 ccgaactcct agacctggta ccgcgccgca tgtcgcggcg tgtcatatcg tcaggggttt
      181 gaaatgggtc gctcatgtcg cgagatccag gaatgggtcg aggaacaggt cgaaaggccg
      241 atcgaggaat gggaacagcg gcaggaacaa cgctgccgcg aagagccatg caaatggtgg
      301 atgctgtgcc tgaacaagtt gttctgctgg ctggtctggg tcgcggtcaa ggtggtccgc
      361 tgggtcgtcg tgacaatcgg caaatgggtc gtgcgcgtcg tctgcacgat cgtcaatgtc
      421 atcctcgacg tgatcgcctt cgtgatcggg ctgatcctgt ctatcccggt gatcggcggg
      481 atcatccgga cggtgctgaa ctggctgacc gaaatcgtct ggcggctggt gggcatcctg
      541 gatttcgtgg ccagcctcgc gggtatccgg ccgcgcaaga agatgtattt cgggatcatc
      601 attccggtca tcgacggcac gcccctggcc accgaggccg ctttgcagcc gcaggtcgat
      661 gcggtgatcg agatctatga ccgcacctgc aacatcgatg cgcgctttac cggtttctgc
      721 cagacccgtg tgtcgcctcc gggtggcagc atcagcgtgc aatgcggcgc gggcggcttt
      781 ttcgccgatt ggtgggtgga tggctcgtgg ttcgaactgg tccagagcct gtgcaaattc
      841 gaaagcggct ggcggcggat catcggctat ggcgccgagc tgatcgtcat cgtcgtcaac
      901 gacatccagc cgccctcgac catcggctgt tcgatggcgg gaacccataa ttacgtcacc
      961 atcgagccgc gcgtggcgcg ggcgacactg gcgcatgaac tgggccatgc ctgcctgctg
     1021 ccgcacgacg aatcggccgg caatctgatg aacgccagtg tcgtcggcgc ggcctttccg
     1081 gtgctgtcga acctgcaagt cgccatcgta cggggctcgc gccacgtcac ctatctgtag
     1141 gaggtttcca tgaccgacaa gaacgaacac gaccatggca agggccgcgg ctgcggcgca
     1201 ccccatccgc ttttcgggct ggccatagcc gccgccatcg tcgcggtcgc ggcggtgctg
     1261 gtcctggcgc tgacatgaaa ccggcaacct gcgtgatccg ttcggccgat gatctgcggc
     1321 tgctgacgga tgccgcgccg cccgcgcggc tga
//
LOCUS       DTVW01000006            1552 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1012225, whole
            genome shotgun sequence.
ACCESSION   DTVW01000006 DTVW01000000
VERSION     DTVW01000006.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1552)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1552)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1552
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1012225"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(160..1305)
                     /locus_tag="EYO87_00050"
     CDS             complement(160..1305)
                     /locus_tag="EYO87_00050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010393020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RsmB/NOP family class I SAM-dependent RNA
                     methyltransferase"
                     /protein_id="HIC64396.1"
                     /translation="MTPAARIAAAADILDRILAGDPAEAALLRWSRGSRFAGSGDRAA
                     IRDLVFHALRCRNSLAHRGGVMSGRGLMIGLLRDEGRDPCALFTGEGHAPAPLTAEEM
                     TDHPGDAIDLPDWILPRWRASLGPRADDEAAALRLRAPVWLRVNPLRATLPEALAALA
                     EDEIAAESHLQLPSALRVTRNERRLSTSRAYRDGVVELQDLSVQLACATVPVRAGQRI
                     LDYCAGGGGKALALAGRAENLRIAAHDADRARMRDLPVRAARSGAKVQIVPRPSGVFD
                     LVVADVPCSGSGTWRRSPDARWRLSEPDLQALVAAQARILDDASGHVATGGLLAYMTC
                     SMLDDENTRQIAAFLARRPDFALRSAHRWSPLSASDGFFLALLERSR"
BASE COUNT          280 a          537 c          516 g          219 t
ORIGIN      
        1 tcgccatcgg cagcaacagc agcggcaagg cagccatggc gttgcgcgac aatcccaaca
       61 tccggtccaa ctgatccatc cgaatcgccc ttctgcgcgg tttcgttctg gataggtcgg
      121 acgagcttaa gattgcgtta atgcgcctgt ggacattttt catcgcgacc gctccagcag
      181 ggccaggaaa aagccgtcgc tggcggacag gggcgaccag cgatgcgcgc tgcgaagggc
      241 gaaatccggg cggcgcgcca gaaaggccgc gatctgcctg gtattttcgt catccagcat
      301 cgagcaggtc atgtaggcca gcagtccgcc ggtcgccaca tggcccgagg cgtcgtccag
      361 gatccttgcc tgcgccgcga caagagcttg cagatcgggt tcggacaagc gccatcgggc
      421 gtccgggctg cgccgccatg ttcccgaacc ggaacagggc acgtccgcca ccaccagatc
      481 gaagaccccc gatggccgcg gcacgatctg gaccttcgcg ccggaccgcg ccgcacggac
      541 gggcagatcg cgcatccgag cgcgatcggc gtcgtgggcg gcgatccgaa ggttctcggc
      601 acgcccggca agggccagcg ccttgccacc gccgccggcg cagtaatcga ggatccgctg
      661 ccccgcccga accggaaccg tcgcacaggc cagttgcacc gacagatcct gaagctcgac
      721 cactccgtcg cgataggcgc ggctggtgga aagacgccgc tcgttgcgcg tgacgcgcag
      781 cgcagagggc agttgcaggt gggattcggc cgcgatctcg tcctccgcca gggctgcgag
      841 ggcctcgggc aaagtggcgc gcaacgggtt cacccgcaac cagaccggtg cccgcaggcg
      901 caaggccgcg gcctcgtcat cggcgcgcgg ccccagcgac gcccgccagc gcggcaggat
      961 ccagtcggga agatcgatgg catcgcccgg atggtcggtc atttcctcgg cagtcagcgg
     1021 ggccggggcg tgaccctcgc cggtgaacag cgcgcaggga tcgcggccct cgtcgcgcag
     1081 caggccgatc atcaggccgc gcccgctcat cacgccgcca cgatgggcaa ggctgttgcg
     1141 gcagcgcagg gcatgaaaga ccagatcgcg gatggccgcg cggtcgcccg agccggcaaa
     1201 gcggctgccg cgcgaccagc gcagcagcgc cgcctcggcc ggatcgccgg cgaggatccg
     1261 gtccaggata tcggcggcgg cggcaatgcg cgcggccggt gtcatcgtat ctgtccggcc
     1321 tgtctcatgc cgctcctgcc tcaccgtcaa tccctgtcgc tttagcgcag gcctggcgcc
     1381 ggcgaaaccg gaacgcactc tgcttattga tgaagccggg caataaatag gctggaaaca
     1441 aaaaacgagc cctatgggct agcgcgccac gcggtcaacg aactcgccga ccaccgcttc
     1501 gtatctctcc gagtcgacgt tccaagcccc gccgtgagga gcgccagcaa aa
//
LOCUS       DTVW01000007            2028 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1018880, whole
            genome shotgun sequence.
ACCESSION   DTVW01000007 DTVW01000000
VERSION     DTVW01000007.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2028)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2028)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2028
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1018880"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1813)
                     /locus_tag="EYO87_00055"
     CDS             complement(<1..1813)
                     /locus_tag="EYO87_00055"
                     /inference="COORDINATES: protein
                     motif:HMM:PF00403.24,HMM:PF00702.24"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal translocating P-type ATPase"
                     /protein_id="HIC64397.1"
                     /translation="MPASAALHSTGSRTVTLSAPTIRCGGCVAAIERALVSRPDVDRA
                     RANLTLRRISVTPSPAAADLSGILAALDRIGHPATPIDAADLFVEAGDRTGQALLRAV
                     AVAGFGAMNVMLLSVAVWSGATGATRDSFHLISGLIAVPIVAYAGRFFFVSAWRALRR
                     GGVNMDVPIALAIALATTLSLYETARGGDQVFFDAAVTLTFFLLIGRWLDHRMRDRAR
                     SAMTGLARLAVREAVEVAPSGATRAVTVDAIVAGMVLRIAPGERIPVDVRILAGASDL
                     DRSLVTGESRPVSVGAGCEVEAGALNLTGPVDAVALRPVSDSFLAQMMAMLATAEEGR
                     GRYVRIADRAARLYAPLIHLLALATFIGWMAVTGDWQVAAFVAISVLIVTCPCALALA
                     VPVAHVVAAGRLMADGILMKDGSALERLAHIDRVAWDKTCTLTTGEPTIRAWPDMDAA
                     SRRAVTSLAARSAHPAARAIARRLVAPAMMSADVPVDVVERPGFGVEGVIAGQRARLG
                     RAVWVGEIAADMATGDGPAFAFDGGAMLRFALDEDLRDGAADAVATLAGMNLAGEILS
                     GDAAPAVERVRRLLGLGGAQSGMKPADKIARLDDLRAQ"
BASE COUNT          350 a          748 c          663 g          267 t
ORIGIN      
        1 cctgcgcgcg caggtcgtcg agccgggcga tcttgtccgc gggcttcatg cccgattgcg
       61 ccccgcccag ccccaggagg cgccggaccc gttccacggc cggggccgcg tcgccggaca
      121 ggatctcgcc ggccaggttc atcccggcca gggtcgccac ggcatccgcc gcgccgtcgc
      181 gcaggtcttc gtccagcgca aaccgcagca tcgcgcctcc gtcgaaggca aaggcgggac
      241 cgtccccggt tgccatatcg gccgcgatct cgccgaccca gacggcccgc cccagccgcg
      301 cccgctggcc ggcgatcaca ccctcgacgc cgaatccggg gcgttccacc acatccaccg
      361 gcacatccgc cgacatcatg gcgggcgcga caaggcgcct tgcgatcgcg cgcgccgccg
      421 gatgcgccga ccgtgcggcc agcgacgtaa ccgcccttcg cgacgcggca tccatgtcgg
      481 gccatgcacg gatcgtcggt tcgccggttg tcagcgtgca ggtcttgtcc caggccacgc
      541 ggtcgatatg cgccagccgt tccaacgccg atccgtcctt catcaggatg ccatcggcca
      601 tcaaccggcc ggcggcgacg acatgggcga ccggaacggc cagggccagc gcgcaggggc
      661 aggtcacgat cagcacgctg atcgccacga acgccgccac ttgccaatcg ccggtcacgg
      721 ccatccagcc gatgaacgtc gccagcgcca gcagatggat cagcggcgca taaagccgcg
      781 ccgcgcggtc ggcgatgcgc acatagcggc cgcgcccttc ctcggccgtg gccagcatcg
      841 ccatcatctg cgccaggaaa ctgtcgctga cggggcgcag ggccaccgcg tccacggggc
      901 cggtcaggtt cagcgccccg gcctcgacct cgcagccggc acccacgctg acgggacgcg
      961 attctccggt gacgagcgac cggtccagat cggaggcacc ggcaaggatg cggacatcga
     1021 ccgggatccg ctcgcccggc gcgatccgca ggaccatgcc cgcaacgatg gcatcgaccg
     1081 tgaccgcgcg cgtcgcgccc gagggcgcaa cctcgaccgc ctcgcgcacg gcaagacgtg
     1141 ccagacccgt catcgcgctg cgcgcccggt cccgcatccg gtggtccagc cagcgaccga
     1201 tcagcaggaa gaaggtcagt gtcacggccg cgtcaaagaa tacctggtcc ccgccgcgcg
     1261 cggtttcgta caggctcagc gtcgtggcca gcgcgatggc cagcgcgatg ggcacatcca
     1321 tgttcacgcc gccccggcgc agtgcgcgcc aggctgaaac gaaaaagaac cgccccgcat
     1381 aggccacgat cggcaccgcg atcagccccg agatcagatg aaagctgtcc cgcgtcgccc
     1441 cggtcgcgcc ggaccagacc gccaccgaca gcagcatcac gttcatcgcg ccgaaccccg
     1501 ccacggcgac cgcgcgcagc agcgcctgac cggtccggtc gccggcctcg acgaacagat
     1561 cagccgcgtc gatcggggtc gccggatggc cgatccggtc cagcgcggcc agaatcccgg
     1621 acagatcggc cgctgcgggc gagggtgtga cgctgatccg gcgcagggtc agattggcgc
     1681 gcgcgcgatc gacatcgggg cgcgagacaa gggcgcgttc gatcgcggca acgcagccgc
     1741 cgcagcggat cgtcggtgcg gacagggtta cggttcgaga acctgtcgaa tggagggcgg
     1801 cagaggcagg catcggaaag acccaaggat ttggccatca actcctagtg ccgcgtcgtc
     1861 accatttctt gatctggatc aagttggcgc aggattgatt gcatagcctg atgccatcgc
     1921 acgtcatgtc gtcgcaggag gcgatcgggt gcaagtgccc atcgacatca ccctggaacg
     1981 caaccgcctt tcgcagcatt tcgaggctct catttcgcgg caggaacg
//
LOCUS       DTVW01000008            2470 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1030051, whole
            genome shotgun sequence.
ACCESSION   DTVW01000008 DTVW01000000
VERSION     DTVW01000008.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2470)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2470)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2470
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1030051"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..417
                     /locus_tag="EYO87_00060"
     CDS             <1..417
                     /locus_tag="EYO87_00060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012179205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIC64398.1"
                     /translation="ELLDIVGLKGFENVYPNELSGGMAQRASICRMLITEPAVLLLDE
                     PFSALDELSRDMMNMELQRICREQDATAFLVTHSIQEAVILSDDIIVMKPRPGRIAEI
                     VTVDLPRPRTLDMMTTPKFGEIVDHIRGMLDKGEDM"
     gene            519..1280
                     /locus_tag="EYO87_00065"
     CDS             519..1280
                     /locus_tag="EYO87_00065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007204100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HIC64399.1"
                     /translation="MTFVFVTFIGTWQFVTSFGFVSPIILPTPMETLKDVLFVGQNLL
                     TAGYMLEPLWITMKEVFYGFALAILIGFSFGVLVGETAFGEKAVMPYLVAIDTMPKVA
                     FAPLFVAWLGFGIESKVALAAFIATFPIVVGTAAGLHAADENARMLFKTMGASRMQTL
                     IKMKLPTGLPQIFTGIKIGAVGVMAGAITGEFLGGGKGFGELIRVAASQLNTPRVFSL
                     ILYLSLIGLALYVIVQWTQRKVVFWQQETVGSHNA"
     gene            1273..2346
                     /locus_tag="EYO87_00070"
     CDS             1273..2346
                     /locus_tag="EYO87_00070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012179207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ldh family oxidoreductase"
                     /protein_id="HIC64400.1"
                     /translation="MPEGMAISVEALGDFVARALGARGVPDADATKVADLMVEADVYG
                     HGTHGVFRLRQYLARLAGGGYNPTPTIAVAQETVATAVIDGDNGLGHLAMAAARDLAI
                     DKARSVGIGWVGVRRGNHAGPLALYVRPQAEAGMLGMAAAVGSANHVPPHGGTDLLLG
                     TNPIAFSAPAAGPDPFVFDMATTVAAMGKIKTLLQQGRPMPEGWMVGRDGKPLTDPAR
                     KSEGFLMPIGGSKGFGLSVAIGLMAGIMNGAAFGSDVVDFTKDTTSSTNTGQFVVALD
                     PKAFGSGDAFARQAARVFDEMRASPPLPGHDPVRLPGDGKTALAKARRSHGLTLDRAL
                     CCDLNAIAADCGLPPPFAPDRAG"
BASE COUNT          419 a          775 c          802 g          474 t
ORIGIN      
        1 gagcttctcg acatcgtggg cctcaagggt ttcgagaacg tttatcccaa cgagctgtcc
       61 ggcggcatgg cgcagcgcgc ctcgatttgt cggatgctta tcaccgaacc ggcagtcttg
      121 ctgctggacg aaccgttcag cgcgctggac gagctgtcgc gcgacatgat gaacatggaa
      181 cttcagcgga tctgtcgcga acaggacgcc accgcctttc ttgtcaccca ttccattcag
      241 gaagccgtca ttctgtccga cgacatcatc gtgatgaaac cgcgccccgg ccgcatcgcc
      301 gagatcgtga ccgtcgatct tccccggccc cggacgctgg acatgatgac gacgccgaag
      361 ttcggcgaga tcgtcgatca cattcgcggc atgctggaca agggagagga catgtgaccg
      421 agtatcagac caatcagccc tccgaagccg agacggtgca ggacaccgtc tgggttcagg
      481 aagtcgcctt catcgattcg gttccgcgct ggattgccat gaccttcgtg ttcgtgacct
      541 tcatcggcac ctggcagttc gtgacaagct ttggcttcgt ctcgccgatc atcctgccga
      601 ccccgatgga aacgctgaag gacgtgttgt ttgtcggtca gaatcttctg accgccggct
      661 acatgctgga gccgctctgg atcacgatga aggaggtttt ctatggcttc gcgctggcaa
      721 tcctgatcgg gttttccttt ggcgtgctgg tgggcgaaac cgcgttcggg gaaaaggcgg
      781 tcatgcctta cctggtcgcc atcgacacga tgccaaaggt ggccttcgcg ccgcttttcg
      841 ttgcctggct tggattcggc atcgaatcca aggtggcgct ggcggcgttc atcgcgacct
      901 ttccgattgt cgtgggcaca gcggccgggc tgcatgctgc ggatgaaaac gcgcgcatgt
      961 tgttcaagac catgggcgca agccggatgc agacgctcat caagatgaag ctgccgacgg
     1021 gtctgccgca gatcttcacc ggcatcaaga tcggcgccgt gggcgtcatg gccggtgcga
     1081 tcaccggcga attcctgggc ggcggcaagg gattcggaga actgatccgc gttgccgcct
     1141 cacaactcaa cacaccgcgc gtcttctcgc tgattctgta tctcagcctc atcggcctgg
     1201 cgctctatgt gatcgtgcag tggacccagc gaaaggtggt gttctggcag caggaaaccg
     1261 tgggatccca caatgcctga gggcatggcg atatccgtcg aggcgctggg tgacttcgtg
     1321 gcccgcgcgc tgggggcgcg cggggtgccc gatgcggacg cgacaaaggt tgcggatctg
     1381 atggtcgagg cggatgtcta cggccacggc acccacggcg ttttccggtt gcgtcagtat
     1441 ctggcgcgcc tggcgggcgg tggatacaac cccacaccga cgatcgctgt cgcgcaggaa
     1501 accgtcgcga cagccgtgat cgacggtgat aacgggcttg gccacctcgc catggccgcc
     1561 gcccgcgacc tggccatcga caaggcgcgc agcgtcggga tcggctgggt cggcgtgcgg
     1621 cgcggcaatc acgccgggcc gctggcgctg tatgtccgtc ctcaggccga agccgggatg
     1681 ctgggcatgg ccgccgccgt gggcagcgcc aaccacgtgc cgccccatgg gggaacggat
     1741 ctgcttctcg gcaccaatcc catcgccttt tccgcccccg ccgcaggccc tgacccgttc
     1801 gtgttcgaca tggcgacgac ggtggccgcg atgggcaaga tcaagacctt gctgcaacag
     1861 ggcagaccga tgcctgaagg ctggatggtc gggcgcgacg gcaagccgct gaccgatccg
     1921 gcccggaagt ccgaaggctt tctgatgccg atcggcggct caaagggctt tggcctgtcg
     1981 gtggccatcg ggctgatggc gggaatcatg aacggcgcgg ccttcggatc ggatgtggtc
     2041 gacttcacga aggacacgac ctcatccacg aataccgggc aattcgtcgt ggcgcttgac
     2101 ccgaaggcgt tcggcagcgg cgatgccttt gccagacagg cagcccgggt cttcgacgag
     2161 atgcgcgcct cgcccccgct gcccggacat gacccggtgc ggctgcccgg cgatggcaag
     2221 acggcccttg ccaaggcgcg ccgcagccat ggcctgacgc tcgaccgcgc gctttgctgt
     2281 gacctgaacg cgattgcggc cgattgcgga ttgccgccgc cctttgcgcc ggatcgggcg
     2341 ggctgaaccg ccggtgacgg accgcctgcc cgcttcggcg ttatcccgcg tcaggcgtcc
     2401 gcagcggcat ccatcatgta gatcgacttg gcattgacga attccttcat gccgaagccg
     2461 ccgtgttcgc
//
LOCUS       DTVW01000009            1639 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1030417, whole
            genome shotgun sequence.
ACCESSION   DTVW01000009 DTVW01000000
VERSION     DTVW01000009.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1639)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1639)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1639
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1030417"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..349)
                     /locus_tag="EYO87_00075"
     CDS             complement(<1..349)
                     /locus_tag="EYO87_00075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006931920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIC64401.1"
                     /translation="MSGVGLEKIVKKFGDAEVIHGVDLQVEPGEFCVFVGPSGCGKST
                     LLRMIAGLEETTGGAIRIGGRDVTGAEPADRGIAMVFQTYALYPHMTVAENMGFGLKM
                     NGHPRTEIAAKVQE"
     gene            complement(384..1187)
                     /locus_tag="EYO87_00080"
     CDS             complement(384..1187)
                     /locus_tag="EYO87_00080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005977111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IclR family transcriptional regulator"
                     /protein_id="HIC64402.1"
                     /translation="MNKAIAAPDSTDGTVGRTLAVLDRVAEFGRPVRFAELLPVSGLP
                     KATLYRFLRTLTKQGMLAFDADRQTYAPGLRLVRLAHAAWSQSALAPIAACHLDQLSH
                     LTGETLHLAQLDQGMVLYVDKRNAARPVEMFSQSGKVGPAYCTGVGKAMLAFLPEPAL
                     RDALARQSFHRFTDKTHRNAESLCAELRDIRACGIAWDNEEHEPGIRCIAAPILSPQG
                     RVLGALSITSGQRAEHDRLERHVPLILDTADKIAKAASDWRFPEQKRPG"
BASE COUNT          278 a          545 c          515 g          301 t
ORIGIN      
        1 cctcctgcac cttggcggcg atctcggtcc gcggatggcc gttcatcttc agcccgaaac
       61 ccatgttttc ggccactgtc atgtgcggat agagggcata ggtctgaaac accattgcga
      121 tgccgcgatc ggccggctcg gcgccggtca cgtcgcgtcc gccgatgcgg atcgcaccac
      181 ccgtcgtctc ttccagcccg gcgatcatcc gcagcagcgt ggacttgcca cagcccgaag
      241 ggccgacgaa gacgcagaac tcgcccggct cgacctgcag atcgacgccg tggatgacct
      301 cggcatcgcc gaatttcttg acgatctttt ccagtccgac tccgctcacg gggtccgtcc
      361 tcccttgttc cgcgaacccg ccttcagccg ggccgcttct gttccggaaa gcgccagtcg
      421 ctggcggctt tcgcaatctt gtccgccgtg tccaggatca gcgggacgtg gcgttccagc
      481 cggtcatgtt cggcgcgctg gcccgaggtg atcgacagcg cgcccagcac ccggccctgc
      541 ggcgacagga tcggcgcggc gatacagcgg atgccgggtt cgtgttcctc gttgtcccag
      601 gcgatgccgc atgcgcggat gtcgcgcagc tcggcgcaga ggctttcggc attcctgtgc
      661 gtcttgtcgg tgaagcggtg aaagctttgc cgggccagcg cgtcccgcag ggcgggttcg
      721 ggcagaaagg ccagcatcgc cttgccgacg ccggtgcaat aggccggccc gaccttgccc
      781 gattgcgaga acatctcgac cgggcgggcg gcgttgcgtt tgtccacata cagcaccatg
      841 ccctgatcca gctgcgccag atgcagcgtc tcgccggtaa gatgcgaaag ctggtccaga
      901 tggcacgccg cgatcggcgc cagcgcgctt tgcgaccagg ccgcatgagc cagccgcacc
      961 aggcgcaggc ccggcgcata ggtctggcga tcggcatcga aggccagcat cccctgcttc
     1021 gtcagggtcc ggagaaagcg gtacagcgtg gccttgggca ggccggatac gggcagcaat
     1081 tcggcaaagc gcaccggccg gccgaattcg gccacgcgat ccagcaccgc cagcgtgcgc
     1141 ccgaccgtgc cgtccgtgct gtcgggcgcc gcaatcgcct tgttcatgac tcctcctcag
     1201 ggctgttgac aggatgagag attcgcggca gcatttcaat atgtaaaatc aagttccagc
     1261 atgtgaaaca agatgctggc tgttttaccg gcgaaaatgg ggaggagacc cgaatgacga
     1321 tgccaagaac caccgcgctg acggcgctga tggccgcgct tgccttgccc gccatggccc
     1381 agcaacgcga tctgaccctg ttcaccgtct tcgttatcca gatcgcgggc gtactgagca
     1441 aaaatggcgt cgctgctggg cgcgacctcc ggcgtttgcc actcgatctg cagtaactgt
     1501 tgtgccttac gcgcctgcca gtaagaacgg gcgactacgg ctactcctga gcgcccggcg
     1561 gcttgcagtt ggaacacatc aaccacaccg ctggcggctt tggccgcgct gctgtcgagg
     1621 gttttgaccg tgccaccaa
//
LOCUS       DTVW01000010            2009 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1032817, whole
            genome shotgun sequence.
ACCESSION   DTVW01000010 DTVW01000000
VERSION     DTVW01000010.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2009)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2009)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2009
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1032817"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1084)
                     /locus_tag="EYO87_00085"
     CDS             complement(<1..1084)
                     /locus_tag="EYO87_00085"
                     /inference="COORDINATES: protein motif:HMM:PF00501.26"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-dependent synthetase"
                     /protein_id="HIC64403.1"
                     /translation="MNGRRTMLETWTEAQLAEIGLRRDGEAVTIDIPADANIFSMTLG
                     RQLGPEGADRPAMLFERPDGRLETWSFAQIDAAATTLAAHLRGLGYGRGDLVGLHIGM
                     RPETAIGHMAVCKLGGTAVTLSQLYGSDALAHALNDCEARCLLTTEAAWANLRDEAGR
                     FGYLTDILVSESAGTEPDLRAILDSAAPPGFEPDYTGPDDPALLMYTSGSTGMPKGIL
                     HGHRILAAYRPSINLFYNLSLQDADAVFWSPSDWAWVGGLLDMMMPAWLAGRPIVTSE
                     ARFTAEWAYEFMARHKVTHVFLAPTAVKRLAQTAQPRDSHDLSLRVICTGGEALAADT
                     LVWAEDRLGVVCNEFYGMTEVNHLIGN"
     gene            complement(1059..1442)
                     /locus_tag="EYO87_00090"
     CDS             complement(1059..1442)
                     /locus_tag="EYO87_00090"
                     /inference="COORDINATES: protein motif:HMM:PF12172.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64404.1"
                     /translation="MRLSIALDYTLPEGGMAPYFDALRAGVALASRCKGCGRISFPPR
                     LVCAECGAEAHDWARLSGRARVVLRTDALAAAFALARFEGADGTTTVALGNPEARGET
                     GQLMAPNGPRPGLWLRLNERETDHA"
     gene            complement(1439..2008)
                     /locus_tag="EYO87_00095"
     CDS             complement(1439..2008)
                     /locus_tag="EYO87_00095"
                     /inference="COORDINATES: protein motif:HMM:PF02803.16"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64405.1"
                     /translation="MIAAPYRRLDCSPLSDGAACVILSQPGNLPGTGKGRARIVGMGS
                     ANDRVRLAERADPGTFAAKRLAAQQAYSHAGITPAQIGLAEVYDSYSGAQLQALEALG
                     LADDVVAAERRGVFDATGTVPTNLSGGLLGQGAPVGATGVAQIVSCAHQLEGRYAGLG
                     PRITPRFALADTHGGIATLCAVTILGGVE"
BASE COUNT          340 a          720 c          640 g          309 t
ORIGIN      
        1 aattgccgat cagatggttc acttcggtca tgccgtagaa ctcgttgcag accacgccca
       61 gcctgtcctc ggcccagacg agggtatccg ccgccagggc ctcgcccccg gtgcagatca
      121 cccgcagcga cagatcatgg ctgtcgcgcg gctgggccgt ctgcgccaga cgcttgaccg
      181 ccgtgggcgc caggaagaca tgtgtcacct tgtggcgggc catgaattca taggcccatt
      241 ctgccgtgaa gcgcgcttcc gaggtgacga tcggccgccc ggccagccat gcgggcatca
      301 tcatgtccag caagccgccg acccatgccc aatccgaggg cgaccagaac accgcgtccg
      361 cgtcctgcaa cgacaggttg tagaacaggt tgatcgaggg gcgataggcg gccaggatcc
      421 ggtgcccgtg caggatgccc ttgggcatcc cggtcgatcc cgacgtatac atcagcaagg
      481 cgggatcatc gggcccggta tagtccggtt cgaatccggg cggggcggcg ctgtccagaa
      541 tggcccgcag atcgggctcc gtccccgcgc tttcggagac gaggatatcg gtcagatacc
      601 cgaaccgccc tgcttcgtcc cgcaggttgg cccaggcggc ttcggtggtc agaagacagc
      661 gcgcctcgca atcattcagc gcatgggcca gggcatccga cccgtaaagc tgcgacagcg
      721 tcaccgccgt tccgcccagc ttgcacacgg ccatatgccc gatggccgtt tcggggcgca
      781 tcccgatatg aagaccgacc agatcgccgc ggccataacc cagtcctcgc agatgcgcgg
      841 caagggtcgt tgcggccgcg tcgatctggg cgaagctcca ggtttcaagg cggccgtccg
      901 gccgttcgaa cagcatggcc ggcctgtccg cgccctccgg tcccagctgc cggcccagcg
      961 tcatggaaaa gatgtttgca tccgccggaa tgtcgatcgt cacggcctcg ccgtcacggc
     1021 gcagcccgat ctcggcaagt tgcgcctctg tccaggtctc aagcatggtc cgtctcccgt
     1081 tcattcagcc gcagccaaag gccgggccga ggcccgttcg gcgccatcag ctgtcccgtt
     1141 tcgccccttg cctcgggatt gcccagggcg accgtcgtcg tgccatccgc accctcgaac
     1201 cgcgccagcg caaaggccgc cgccagggcg tcggtgcgca gaaccacgcg ggcgcgaccg
     1261 gacagacgcg cccagtcatg cgcctctgca ccgcactccg cgcaaaccag ccgcggcgga
     1321 aagctgatcc gtccgcatcc cttgcaacgc gacgccaggg cgacgccggc acgcaatgcg
     1381 tcgaaatacg gggccatccc gccctcgggc agcgtgtagt ccagggctat cgaaagtctc
     1441 attccacgcc tcccagaatg gtcacggcgc acaaggtcgc gatgccgcca tgggtatcgg
     1501 ccagcgcgaa acgcggggta atccgcggcc cgagacccgc atagcgcccc tctagctggt
     1561 gcgcgcagga cacgatttgc gccacgccgg tcgcgcccac cggcgccccc tgcccaagca
     1621 ggccgcccga cagattggtc ggcaccgtgc ccgtcgcgtc gaacacgccg cgtcgttctg
     1681 cggcaacgac gtcatccgcc aggcccaacg cctccagcgc ttgcagctgc gcgccggaat
     1741 agctgtcata gacctcggcc agcccgatct gcgccggtgt gattccggcg tgcgaatagg
     1801 cctgctgagc ggccaggcgc ttggcggcga atgtgcccgg atcggcgcgt tcggccaggc
     1861 gaacccggtc attggccgaa cccatgccga cgatccgggc gcggcccttg ccggttcccg
     1921 gcaggttgcc gggctgagac aggatcacgc aggctgcccc atcgctgagg ggagagcagt
     1981 ccagccgccg atagggcgcg gcgatcatc
//
LOCUS       DTVW01000011            2929 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1032893, whole
            genome shotgun sequence.
ACCESSION   DTVW01000011 DTVW01000000
VERSION     DTVW01000011.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2929)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2929)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2929
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1032893"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..337)
                     /locus_tag="EYO87_00100"
     CDS             complement(<1..337)
                     /locus_tag="EYO87_00100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001314687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HIC64406.1"
                     /translation="MSQRRYQLTDFEWSVIAPLLPNKPRGVARVDDRRVLNGIYWRLR
                     TGSPWADIPERHGPYTTCYNRFVRWARLGVWDRIFEAVSAAYEGSEQSVDRSSIRVHQ
                     HGANAKTGAK"
     gene            complement(408..1475)
                     /locus_tag="EYO87_00105"
     CDS             complement(408..1475)
                     /locus_tag="EYO87_00105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010440322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HIC64407.1"
                     /translation="MKETSINLALQGGGAHGAFAWGVLDRLLDEDWLRIAGISGTSAG
                     ALNGAALKAGLSAHSGPAGRLAARRNLDYLWSEVGQLSDNRLVRWMNSLMPMPRGMHR
                     LTEMFSPAAWLDNLTRIFSPYDYGPFYVNPLGPVLRELPHRDFGNRRGPELFVAATNV
                     RTGRIRVFTGEAVTPDAVMASACLPNLFRAVEIRDPATGKLDAFWDGGFTGNPALFPF
                     YQPRFPRDIVIVNINPLMRDGVPKTPVEIADRVNEISFNSSLMAQLRAINFVKKLHQE
                     DRLHDRVMANPLIHMILDDTLMNDLTARSKMMPAPGLLARMKEAGQAAADGFLDEHGD
                     ALGDRDTVDLRALFAGSEVVG"
     gene            complement(1665..2648)
                     /locus_tag="EYO87_00110"
     CDS             complement(1665..2648)
                     /locus_tag="EYO87_00110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013653967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HIC64408.1"
                     /translation="MQKRQLGQNGPMVGAVALGTMNFCGTYGETTQDQALRCMAECLD
                     LGVDHFDTSNVYGMGRAEDLLSRFLKHHRHRVVLASKCGITRNPDHPFDNSADHMRQA
                     LEDSLRRLGVERIDLYYLHRHEVARPIEEVMQVLLRFRDEGKIGAVGLSEVSPATLQR
                     ARAVGPVAAVQSEYSLWTRQVELGMLQATGRGDAALVAFSALGRGVLSGAIPDPSTFG
                     KTDLRQAMPRFSAENWPHNLVRLRAFQDFARDIGHDPASLAIAWLLSRGPHVIALPGS
                     RSPDHMRANALGATLDLTPDQIARIDQILPVGWAHGARYGPAMSNGPQAYC"
     gene            complement(2765..>2929)
                     /locus_tag="EYO87_00115"
     CDS             complement(2765..>2929)
                     /locus_tag="EYO87_00115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005794538.1"
                     /note="catalyzes the release of newly synthesized
                     polypeptide chains at the stop codons UAA and UGA; Derived
                     by automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 2"
                     /protein_id="HIC64409.1"
                     /translation="SYVLHPYQMVKDLRTSEETSDTQGVLDGDLDAFMAATLALDVAG
                     KTRAEAQSDD"
BASE COUNT          539 a          995 c          911 g          484 t
ORIGIN      
        1 gctttgcccc cgtttttgcg ttggctccgt gctggtggac gcggatcgag gacctgtcca
       61 ccgactgttc cgaaccttcg taagccgctg acacagcttc gaatatccga tcccatacac
      121 ccagacgcgc ccaacggaca aagcggttat aacacgtggt gtaggggcca tggcgctcgg
      181 ggatgtcggc ccagggagaa ccggtccgga gccgccagta gatgccgttc aggacccgac
      241 gatcatcgac ccgcgcaacc ccgcgcggct tgttcggcaa aagtggcgcg atgacagacc
      301 actcgaaatc ggtcaattgg tagcgacgtt gggacaagct gctctcctct ttgcaaggaa
      361 tgaatcagca aagctcaaac gccgctagtc atttatgagt gcatgaccta gcccacgacc
      421 tcggatcccg cgaacagcgc ccgcagatcg accgtgtcgc gatcgcccag ggcatcgcca
      481 tgttcatcga gaaatccgtc ggcggcggcc tgtccagcct ctttcatccg cgccagaagg
      541 ccgggcgcgg gcatcatctt ggaccgcgcg gtcaggtcat tcatcagcgt gtcgtccagg
      601 atcatgtgga tcagcggatt ggccatgacg cgatcgtgca gccgatcctc ctggtgcagc
      661 ttcttgacga agttgatggc gcgaagctgc gccatcagcg acgagttgaa gctgatctcg
      721 ttgacccgat cggcgatctc gaccggtgtc ttcggcaccc cgtcgcgcat cagcggattg
      781 atgttgacga tcacgatgtc acgcggaaag cgcggctgat agaatggaaa cagcgccgga
      841 ttgccggtga agccgccatc ccagaacgca tccagcttgc cagtggccgg atcgcggatc
      901 tcgaccgcgc ggaacaggtt cggcaggcag gccgatgcca tcaccgcgtc gggcgtcacc
      961 gcctcgccgg taaagacccg gatgcgaccg gtgcggacat tggtggcggc gacgaacagt
     1021 tcggggcccc gcctgttgcc gaaatcgcga tgcggcaatt cgcgcaacac cggccccagc
     1081 ggattgacgt agaaaggtcc gtaatcatag gggctgaaaa tgcgggtcag attgtccagc
     1141 catgcggcgg gcgagaacat ctcggtcagg cggtgcattc cgcgcggcat cggcatcagc
     1201 gaattcatcc agcgaaccag gcggttgtcg gaaagctgcc cgacctcgga ccacaggtag
     1261 tccaggttgc gccgggcggc gagcctgccg gcgggtcccg aatgcgccga caggccggcc
     1321 ttgagcgcgg ccccgttcag cgccccggcc gaggtgccgc tgatccccgc gatgcgcagc
     1381 caatcctcgt ccagcagccg gtccaggacg ccccaggcga aggccccatg ggcgcctccg
     1441 ccctgaaggg ccagattgat gcttgtctct ttcatgccac gatccgccat ttcgcacccg
     1501 cagcataacc aagcccgatc ccggcgcaag tccggccttg tccggccgga ttggctgccg
     1561 ccaccgccgc aatccctgcc gtgaaggccg ggtcatccgc gcgacggcca tggatcgggg
     1621 ccgccagcca gccacgcgat ccggccagcg gggggccgcc gcgctcagca ataggcttgc
     1681 ggtccgttgg acatggcggg accgtagcgc gcgccgtgcg cccagccgac cggcaggatc
     1741 tggtcgatcc gggcgatctg atccggcgtc agatccagcg tcgcgccaag ggcgttggcg
     1801 cgcatgtgat cgggactgcg cgatccgggc agcgcgatga catgcggtcc gcgcgacaag
     1861 agccaggcaa tcgcgaggct tgccggatca tggccgatat cgcgagcgaa gtcctgaaac
     1921 gctcgcagcc tgaccagatt atgcggccag ttctcggccg aaaagcgcgg catcgcctgc
     1981 ctcagatcgg tcttgccgaa tgtcgaggga tcggggatgg cgccggacaa cacgccgcgt
     2041 cccaaggccg aaaacgcgac aagggccgca tcgccgcgac ccgtcgcctg caacatcccc
     2101 agttccacct gccgcgtcca cagcgaatat tccgactgca ccgccgcgac cggccccacc
     2161 gcccgcgccc tctgcaatgt cgcgggcgaa acctcggaca atcccacggc accgatcttg
     2221 ccctcgtcgc ggaaccgcag caacacctgc atcacctcct cgatggggcg cgcgacttcg
     2281 tggcggtgca agtaatagag atcgatccgc tcgaccccca gccgccgcag cgaatcttcc
     2341 agcgcctgcc gcatgtggtc cgcggaattg tcgaaagggt gatcgggatt gcgggtgatc
     2401 ccgcatttgc tggccagaac gacccggtgg cggtgatgct tgagaaaccg cgacagcaaa
     2461 tcctcggccc ggcccattcc gtagacattc gacgtgtcga aatgatcgac gcccaggtcc
     2521 agacattccg ccatgcagcg cagggcctga tcctgtgtcg tctcgccata ggtgccgcag
     2581 aaattcatcg tcccaagggc caccgccccc accatcggac cattctgccc cagttgccgc
     2641 ttctgcatcc gcatcccccg ccttgtcgcg ccgcgatcaa accctgacgc cggggcggcc
     2701 gcaagccgcg cgaaggcttc tttcggcctg atcccggcga agcgcggctt cgacgccggc
     2761 gggatcaatc gtcggactgc gcctcggccc gggtcttgcc cgcgacatcc agcgccagcg
     2821 tcgccgccat gaaggcgtcc agatcgccgt ccagaacgcc ctgtgtgtcg ctggtctctt
     2881 ccgaggtgcg cagatccttg accatctggt agggatgcag cacgtagga
//
LOCUS       DTVW01000012            2716 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1033117, whole
            genome shotgun sequence.
ACCESSION   DTVW01000012 DTVW01000000
VERSION     DTVW01000012.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2716)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2716)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2716
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1033117"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..942
                     /locus_tag="EYO87_00120"
     CDS             <1..942
                     /locus_tag="EYO87_00120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005793849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="error-prone DNA polymerase"
                     /protein_id="HIC64410.1"
                     /translation="GFYAPAQIVRDARENGVEIRPVCVNSSLWDNRLERRADGAWALR
                     LGFRQIRGFRDGDARRIQECRGNGYTDVESLWLRAGIPPAVLERLAEADAFAAIGLTR
                     RDALWQVRAIRAPAPLPLFSDPLDGEATCEPQVALPAMHLGEEVVEDYVALRLSLRAH
                     PMELLRPRLPGLIPNRDLPRVPPRRVSVCGLVITRQRPGTASGVIFLTLEDETGVANV
                     VVWRRIHDRFRRAVMGGRLLRVTGRLEREGIVVHLIADRIEDLSHRLAELGHPLEGAV
                     GTTSPRADIAPRPKHQPAHAGHPRDQAKRLFPSRDFH"
     gene            complement(1038..1994)
                     /locus_tag="EYO87_00125"
     CDS             complement(1038..1994)
                     /locus_tag="EYO87_00125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004208311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HIC64411.1"
                     /translation="MSKPVIMIVDDEIANIEIMGAVLGEDYEICFSRSGVDALRVVQR
                     VTPDLILLDIVMPGLDGYEVCRKLKDDPATADIPVIFTTGLYQTEDEVRGLAAGAIDY
                     VTKPIQPVALRSRVDNHIELKRMRDQLANLAMTDGLTGLGNRRLLEKLLQTELRRLSR
                     EGDWLSFIMLDIDFFKQFNDLYGHLEGDQCLRKVASALGGAVRRSGDTCLRYGGEEFA
                     CILPRTDHDGALEVAEDMRRRVEALGIGNGGSDVSPVVTVSIGVASGRCSSELSMELW
                     ISTADAMLYQGKRSGRNRVEGHVMIPASGAEILGHGERREAG"
     gene            complement(1991..>2716)
                     /locus_tag="EYO87_00130"
     CDS             complement(1991..>2716)
                     /locus_tag="EYO87_00130"
                     /inference="COORDINATES: protein motif:HMM:PF01627.21"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hpt domain-containing protein"
                     /protein_id="HIC64412.1"
                     /translation="VLGSWLKTGPQAARKERTRAGATSLVPVLPAQLPPFGLDRALRR
                     VNGKAALLRRLIVSFGESYGHVGDDLRAMIRAGRIEDAARLAHTLKSVAGSLELAEVP
                     DLAGRIEAALGAGESGAVAGLIAELADRMAPAIAAANSLQPAPSQASADAPAAARINA
                     ASHASAEARAARDALRQQLCRSSLSARAGFHAFADALGLDAGTRDAHPVLQALLRLDY
                     AEALRLLDGTQPETGPDNGEVAT"
BASE COUNT          438 a          940 c          876 g          462 t
ORIGIN      
        1 gggttttacg cccccgccca gatcgtccgg gacgcgcgcg agaacggggt cgagatccgc
       61 cccgtctgcg tcaattccag cctctgggac aaccggctgg aacggcgcgc cgatggcgca
      121 tgggcactgc ggctgggatt tcgccagatc cggggctttc gcgacggcga tgcccggcgg
      181 atccaagaat gtcgcggcaa cggctatacc gatgtcgaaa gcctgtggct gcgcgccgga
      241 attccgcccg ccgtgctgga acggctggcc gaggccgacg ccttcgccgc catcggcctg
      301 acccggcgtg acgcgctgtg gcaggtccgt gcgatccggg cacccgcgcc gctgccgctg
      361 ttttccgatc cgctggatgg cgaggccact tgcgagccgc aggttgcgct gcccgccatg
      421 catctgggcg aggaggtggt cgaggattac gtcgccctgc gcctgtcgct gcgcgcccat
      481 ccgatggaat tgctgcgccc gcgcctgccg ggcctgatcc cgaaccgtga tctgccacgg
      541 gttccgccgc gccgggtttc ggtctgcggc ctcgtcatca cccgccagcg ccccggcacg
      601 gcatcgggcg tgatcttcct gacgctggag gacgagaccg gggtggccaa tgtcgtcgtc
      661 tggcggcgca tccatgaccg tttccgccgc gcggtgatgg gcgggcggct gttgcgagtc
      721 accgggcggc tggaacgcga aggcatcgtg gtgcatctga tcgccgatcg gatcgaggat
      781 ctgtcccatc gccttgccga actgggccat ccgcttgagg gtgcggtcgg cacgacctcg
      841 ccccgcgcgg acatcgcgcc gcgcccgaaa catcaacccg cccatgccgg ccatccccgc
      901 gatcaggcga aacggctttt ccccagccgg gattttcatt gaaagcagca tcgcggcttt
      961 gcccgggtcc tggcccgctt gtgtcggatg atgcacgccg acgcatcgat ggcaccgcga
     1021 ccggtgatgg ccgacgatca gcctgcctcg cggcgttccc catgccccag gatttccgcc
     1081 cccgaggccg ggatcatgac atggccctcg acgcggttcc ggccgctgcg cttgccctgg
     1141 taaagcatgg cgtcggcggt cgagatccac aattccatcg acaattcgga cgagcagcga
     1201 ccgctggcga cgccgatgct gacggtcacg acagggctga catcagagcc gccgttgccg
     1261 atacccagag cctcgaccct ccggcgcatg tcctcggcca cctccagcgc gccatcgtga
     1321 tcggtgcgcg gcaggatgca ggcgaattcc tcgccgccat agcgcaggca ggtatcgccg
     1381 cttcgccgga ccgcgccgcc tagtgccgaa gccaccttgc gcaagcactg gtccccttca
     1441 agatgcccat aaagatcgtt gaactgtttg aagaaatcga tatccagcat gatgaaggac
     1501 agccagtcgc cctcgcgaga gaggcggcgc agttcggtct gaagcagctt ttccagaagc
     1561 cggcggttgc caagacccgt cagcccgtcc gtcatcgcca gattggccaa ctggtctcgc
     1621 atccgcttca attcgatatg gttgtccaca cggctgcgca gggcaaccgg ctgaatcggt
     1681 ttggtgacat aatcgatggc cccggcggcc agaccgcgca cctcgtcctc ggtctggtaa
     1741 aggccggtgg tgaagatcac cggtatgtcg gccgtggcgg ggtcgtcttt cagctttctg
     1801 cacacctcgt agccatccaa gcccggcatc acgatatcca gcaagatcag atccggcgtt
     1861 acccgctgaa cgacccgcaa cgcatctacc cccgaacggg aaaagcagat ctcgtaatcc
     1921 tcgcccagga cagcgcccat gatctcgata ttcgcgatct cgtcgtccac gatcatgatg
     1981 accggtttgc tcatgttgcg acctcaccat tgtcgggacc ggtttcgggc tgcgtgccgt
     2041 ccagaaggcg cagcgcctcg gcataatcca gtcgcagcag ggcctgaagc acgggatggg
     2101 cgtcacgcgt gccggcgtcc aggcccaggg catcggcaaa ggcgtgaaaa ccggctcgtg
     2161 ccgaaaggct gctgcggcac agttgttggc gcagcgcatc ccgggcggcc cgagcctcgg
     2221 ccgaggcgtg cgaagccgcg ttgatccgcg cggcagccgg ggcgtcggca cttgcctgcg
     2281 acggcgcggg ctgaaggctg tttgccgcgg cgatggccgg cgccatcctg tccgccagtt
     2341 ccgcgatcaa cccggccacg gcgccggatt cgccggcgcc aagcgccgcc tcgatccgcc
     2401 cggccagatc cggcacctcg gccagttcca gcgatccggc gacgcttttc agggtgtggg
     2461 ccagccgcgc cgcatcctcg atccgcccgg cccggatcat ggcgcgcaga tcgtcgccga
     2521 catggccgta gctttccccg aaactgacga tcagacgccg caacaatgcg gcctttccgt
     2581 ttacgcgacg aagcgcgcgg tccaggccga agggcggcag ttgtgcaggc aggacgggca
     2641 ccaagctggt cgcaccggca cgtgtccgct ctttccgggc cgcctgcggt ccggtcttca
     2701 gccaggatcc aagaac
//
LOCUS       DTVW01000013            1243 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_103341, whole
            genome shotgun sequence.
ACCESSION   DTVW01000013 DTVW01000000
VERSION     DTVW01000013.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1243)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1243)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1243
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_103341"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..735
                     /locus_tag="EYO87_00135"
     CDS             <1..735
                     /locus_tag="EYO87_00135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_353828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HIC64413.1"
                     /translation="LLHDDVVDESRQRRGRPTANLLWDNKSSVLVGDYLFARSFQLMV
                     EPGNLRTLEILANASATIAEGEVLQLTAAQDLGTDESVYLQVVRGKTAALFSAATEVG
                     GVIAGAPEAQVRALFDYGDALGIAFQIVDDLLDYGGATETIGKNVGDDFRERKLTLPV
                     IKAVASADPAERAFWARVIEAGDQHDGDLEQALRLLDRHGSMRAARADAMDWAERAKS
                     ALAELPDHPVRDMLSDLADFVVSRVA"
     gene            complement(842..1243)
                     /locus_tag="EYO87_00140"
                     /pseudo
     CDS             complement(842..1243)
                     /locus_tag="EYO87_00140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005851078.1"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ammonium transporter"
BASE COUNT          213 a          400 c          434 g          196 t
ORIGIN      
        1 ctgctgcatg acgacgtggt cgatgaaagc cggcagcggc gcggccggcc caccgcgaac
       61 ctgttgtggg acaacaagtc ctcggtcctc gtgggtgatt atctctttgc ccgcagcttc
      121 cagctgatgg tcgagcccgg caacctgcgc acgctggaaa tccttgccaa tgccagcgcc
      181 accatcgccg agggcgaggt gctgcaactg actgccgcgc aggatctggg aaccgatgaa
      241 agcgtctatc tgcaggtggt gcggggcaag acggcggcgc tgttttcggc ggcgaccgaa
      301 gtcggcggcg tgatcgccgg cgcgcccgag gcccaggtgc gggcgctgtt cgactatggc
      361 gacgccctgg ggatcgcctt ccagatcgtt gacgacctcc tggattacgg cggcgcgacc
      421 gagacgatcg gcaagaatgt cggtgacgac tttcgcgaac gcaagctgac cctgccggtg
      481 atcaaggccg tcgccagcgc cgatcccgcc gagcgggcct tctgggcgcg ggtgatcgag
      541 gctggcgacc agcacgatgg ggatctggag caggccctgc gcctgctgga ccggcacggt
      601 tcgatgcggg ccgcgcgggc ggatgcgatg gactgggccg agcgcgcgaa atcggcactg
      661 gcagagctgc ccgatcatcc ggtccgggac atgctgtcgg atctggcgga tttcgtcgtc
      721 agccgcgtcg cctgagcgtt tcgtccgcat tttccggcac cgcccgcaga agcctcgggg
      781 acggacgtga caaaagggcg ggccgcttgc gcaacccgcc ctttcgggga aatgccccgg
      841 cctatttggc ctggacgaag tcgggatagg cctccatccc catctcggag atgtcgagac
      901 cggtgatctc ggcatcctgg ctgacacgga tcccgccgaa cgccctgagc gccagccaca
      961 cgaccaggct gacgctgaag acgaaggcgc cgatggccac gatgccgatg atctgggtga
     1021 cgaagccggt gtcggggttg gtcgccggga cgatcagcgt gccccagatc ccggcgatca
     1081 ggtgaaccgg gatcgcaccg accacgtcgt cgatcttgaa tctgtccagc atcggaaccg
     1141 ccaggcaggc aagggtggcg ccgatgccgc cgatcaggac cgcggcgaag atcgacggcg
     1201 tcagcggctc ggccgtgatc tagaccagac ccgccagcgc gcc
//
LOCUS       DTVW01000014            1162 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1034910, whole
            genome shotgun sequence.
ACCESSION   DTVW01000014 DTVW01000000
VERSION     DTVW01000014.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1162)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1162)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1162
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1034910"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>1162
                     /locus_tag="EYO87_00145"
     CDS             <1..>1162
                     /locus_tag="EYO87_00145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008559843.1"
                     /note="catalyzes the conversion of salicylyl-CoA to
                     gentisyl-CoA; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="bifunctional salicylyl-CoA
                     5-hydroxylase/oxidoreductase"
                     /protein_id="HIC64414.1"
                     /translation="MLTRSQRISHENLRARDRTWLEGAERWFMNQSGVDPDVPLRAPM
                     FTPLRLRRMALKNRVVVSPMAQYKAVDGTPTDWHLVHYGERAKGGAGLVYTEMTCVSA
                     EGRITPGCPGLYAPDHEAAWTRLCDFVHGETDAKICCQIGHSGRKGSTQVGWETMDAP
                     LPAGNWDVVSASAIPWSKNNAMPREITPDEMARVKAQFVAAAEMAVRAGFDMIELHAA
                     HGYLLSSFISPKSNARKDAYGGSLDNRMRWPLEVFAAMRIVLPESMPMSVRISANDWV
                     GADGVTPDEAVEIARAFWEAGADLIDVSAGQTSVEARPVYGRMFQTPFSDRIRNEAGI
                     RTIAVGNIYEADHANSILMAGRADLVAVGRPHLADPYWTLHEASKIGDRAAPD"
BASE COUNT          209 a          369 c          389 g          195 t
ORIGIN      
        1 gatgctgacc cgcagccagc gcatcagtca cgagaacctt cgcgcgcgtg acaggacgtg
       61 gcttgaaggt gccgagcgct ggttcatgaa ccagtccggc gtcgacccgg acgtgcccct
      121 gcgcgcgccg atgttcaccc ccctgcggct gcgccggatg gcgttgaaga accgcgtcgt
      181 cgtctctccg atggcgcaat acaaggccgt ggacggcact ccgacggact ggcatctggt
      241 gcattacggc gaacgtgcca aaggtggcgc gggccttgtc tataccgaga tgacatgcgt
      301 gtcggcggaa ggcaggatca cgcccggttg ccccggcctc tacgcgcccg atcatgaggc
      361 cgcatggacg cgcctgtgcg atttcgtcca cggcgaaacg gacgcgaaga tctgctgcca
      421 gatcggccat tcagggcgca agggatcaac gcaggtcggt tgggaaacca tggatgcgcc
      481 gttgcctgcc gggaactggg atgttgtcag cgcctccgcc atcccctggt cgaagaacaa
      541 cgcgatgccg cgagagatca ctccggatga gatggcacgg gtcaaggcgc agttcgttgc
      601 cgccgccgaa atggcggtgc gcgccggttt cgacatgatc gaactgcacg ccgcgcacgg
      661 ctatctgctg tcgtccttca tctcgcccaa atcgaacgca aggaaagacg cttatggcgg
      721 gtcgctcgac aaccgcatgc gctggccgct cgaggttttc gcggcgatgc ggatcgtcct
      781 gcccgagagc atgccgatgt ctgtgcggat ctcggccaat gactgggtcg gcgcggacgg
      841 ggtgacaccg gacgaagcgg tcgagatcgc ccgggccttc tgggaggccg gcgcggatct
      901 gatcgacgtc tccgccggtc agaccagcgt cgaagccagg cccgtctatg gccgtatgtt
      961 ccagacgccc ttttcggacc ggatccgcaa cgaggccggg attcgaacga tagcggtcgg
     1021 aaacatctac gaggccgacc atgccaattc gatcctgatg gcgggtcggg cggatctggt
     1081 agcggtgggc cgtccgcacc tggccgaccc atactggacg ctgcacgagg cgtccaagat
     1141 cggcgaccgc gccgccccag ac
//
LOCUS       DTVW01000015            1017 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1035426, whole
            genome shotgun sequence.
ACCESSION   DTVW01000015 DTVW01000000
VERSION     DTVW01000015.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1017)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1017)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1017
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1035426"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            1..801
                     /locus_tag="EYO87_00150"
                     /pseudo
     CDS             1..801
                     /locus_tag="EYO87_00150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010394145.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
     gene            856..>1017
                     /locus_tag="EYO87_00155"
     CDS             856..>1017
                     /locus_tag="EYO87_00155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate kinase"
                     /protein_id="HIC64415.1"
                     /translation="MILCAGESLIDMVPENGNFRPLAGGAVYNTTVALGRLGEPTAYL
                     WPISRDPFGE"
BASE COUNT          148 a          332 c          346 g          191 t
ORIGIN      
        1 accggcacca gccgcaggat caagccgcag ggcgtcctgc ccttcgcgct gaccgagaca
       61 caggcgcgca aggcgatgga ggactggctg ggcgggctgt ggttcgcgcc ctccggtctg
      121 accgcctatg cccggcgcgg tcgccggatg cggggcgtct atcagccctt ctggacattc
      181 gacgccgata ccgtttcggc ctattccggc cagcgcggcg acgcctatta cgaaacgatc
      241 catgtcacgc aagagattga cggccgccag cagcgcgtgc cccgtcaggt ccgccgcatc
      301 cgctggcgcc cggttggggg ccgcgtgacg cggcgcttca acgatgttct ggtgctggcc
      361 tccgcctcgc ttccgcgccg tttctcggac gggatgacgc cctgggatct gtcgcatctg
      421 cgtccctaca gccccgaata tctggccggt ttcgaggccg agggctatac gatcccgctg
      481 gcggacggcc atgccatcgc gcgccaggac atggcagggg tcatcctgaa cgacgcccgc
      541 cgcgatatcg gtggcgatga acagcgcgtc gaccggatcc agaccgatta cgcggccgag
      601 accttcaagc atatcctgct gccggtctgg gccgccgcct atcgctataa cggccgcagc
      661 ttccgcttcg tggtcaacgg ccagtccggg cgggtaatgg gtcagcggcc ctggtcggtc
      721 tggaagatcg cggccgcgat tcttgccgct ctggttgctc tggcggtttt cctgtatctc
      781 ggtcaggcag gcggttatgt gtagttcggc cggggtgcgg acggattgtc ataccgggat
      841 ggtgaggggg ctggaatgat cctgtgcgcg ggcgaatcgc tgatcgacat ggtgcccgag
      901 aacggcaatt tccgcccgct ggcgggcggg gcggtctata acaccacggt cgcgcttggc
      961 cgtctgggtg aacccaccgc ctatctgtgg ccgatcagcc gcgatccctt cggcgag
//
LOCUS       DTVW01000016            2235 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1035598, whole
            genome shotgun sequence.
ACCESSION   DTVW01000016 DTVW01000000
VERSION     DTVW01000016.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2235)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2235)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2235
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1035598"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            149..946
                     /locus_tag="EYO87_00160"
     CDS             149..946
                     /locus_tag="EYO87_00160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011569285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="segregation/condensation protein A"
                     /protein_id="HIC64416.1"
                     /translation="MPDSPPEDDFDSVAQRRADEALIIDVDGYEGPLDLLLTLARTQK
                     VDLMKISVLHLAEQYLAFVEKARALRIELAADYLVMAAWLAFLKSRLLLPPDPEAEGP
                     SAEDMAAHLAFQLERLQAMREAAARLMGRDRLGISRFARGAPETIARKRRTEWQAGLI
                     DLMRAYARLKTKEEFRPYAFERHDTFTMEQALDRMRGLIGFAGDWTDLSDFLPDGWDG
                     DGRRRRSATAATFAASLELARQGKLEIRQAGTFAPISFRRNPSADRS"
     gene            1032..1631
                     /gene="scpB"
                     /locus_tag="EYO87_00165"
     CDS             1032..1631
                     /gene="scpB"
                     /locus_tag="EYO87_00165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012178396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMC-Scp complex subunit ScpB"
                     /protein_id="HIC64417.1"
                     /translation="MVEAILFAAAGPITVRDLAARLPRGCDPAEAVSALRRRYQGRGV
                     ALERIGDGYAFRTAPDLSFLMQTETVEQRRLSRAAVETLAIIAYHQPVTRAEIEEIRG
                     VAVSRGTLDQLIEMEWVRVGRRRMTPGRPATFVVTETFLDHFGLESARDLPGLSELRA
                     AGLLDSRPPREGIATPLAPATEDDNIDRGIPADDLFEDE"
     gene            1641..1835
                     /locus_tag="EYO87_00170"
     CDS             1641..1835
                     /locus_tag="EYO87_00170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008029142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64418.1"
                     /translation="MNGFINMFTRLFMRRMMNWGINKGINRMSRRKPGATPKPQQART
                     NRQAAKRARQAAKLARRIGR"
     gene            1875..>2235
                     /locus_tag="EYO87_00175"
     CDS             1875..>2235
                     /locus_tag="EYO87_00175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007427292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent RNA methyltransferase"
                     /protein_id="HIC64419.1"
                     /translation="MRDDPFDIFLVATPGLEQPLAAEARALGWVPEIQPGGVTIRGGW
                     ADVWRANLWLRGATRVLARIGSFRALHLAQLDKRARKFLWASVLRRDLSVRVDAVCRA
                     SRIYHAGAAAQRVERAIA"
BASE COUNT          350 a          788 c          738 g          359 t
ORIGIN      
        1 cgctgaccgc ctgatttctt cgttgcacaa atcccccttg cgcgcccgcc gcgcttgact
       61 cgcgcagggc ttgggccgag tctgcccgtc gcagcaaacg ggaattccct tggccagatc
      121 ctcgacagac gttccctatc tgaagccggt gcccgacagc ccgccagagg atgatttcga
      181 cagcgtggcg cagcgccggg cggacgaggc gctgatcatc gacgtggacg gctatgaagg
      241 ccctctggac ctgctgctga ccctggcgcg gacccagaag gtcgatctga tgaagatctc
      301 ggtcctgcac ctggccgaac aatacctggc cttcgtggaa aaggcccgcg ccctgcgaat
      361 cgagctggcc gccgattatc tggtcatggc agcttggctg gccttcctga aatcgcgcct
      421 gctgttgccg cccgaccccg aggccgaggg cccctcggcc gaggacatgg ccgcccatct
      481 ggccttccag ctggaacggc tgcaagccat gcgcgaggcg gcagcccgcc tgatgggccg
      541 cgatcggctg ggcatcagcc gctttgcgcg cggcgcgccc gaaaccattg cccgcaagcg
      601 gcgcaccgaa tggcaggccg ggctgatcga cctgatgcgc gcctatgccc gcctgaagac
      661 gaaagaggaa ttccgcccct atgccttcga gcgccacgac acattcacca tggaacaggc
      721 gctggaccgg atgcgcgggc tgatcggctt tgccggcgac tggaccgacc tgtcggattt
      781 cctgcccgat ggctgggacg gtgacggcag gcgccgccgc tcggccaccg ccgccacctt
      841 tgccgcctcg ctggaactgg cccggcaggg caagctggag atccgccagg ccgggacctt
      901 cgcgcccatc agcttccgcc gcaacccttc agccgaccgc tcctgacgtg accgatccga
      961 ccccgcaaga cgacgccgag gccgaagccc ggcccgagtt tccgccgccg ccgccggacc
     1021 agcaggaacg aatggtcgaa gccatcctct tcgccgccgc cggtcccatc accgttcgcg
     1081 acctggccgc ccgcctgccg cgcggctgcg atccggccga ggccgtgtcg gccctgcgcc
     1141 gccgctatca gggccgcggc gtggcgctgg aacgaatcgg cgacggctat gccttccgca
     1201 ccgcccccga tctgtccttc ctgatgcaga ccgaaacggt cgagcagcgc cgattgtccc
     1261 gcgctgccgt cgagacattg gcgatcatcg cctatcacca gccggtcacc cgcgccgaga
     1321 tcgaggaaat tcgcggcgtc gcggtcagcc gcggcacgct ggaccagctg atcgagatgg
     1381 aatgggtccg tgtcggccgc cgccgcatga caccgggcag gccggcgacc tttgtcgtga
     1441 ccgagacatt tctggaccat ttcggcctgg aatcggcccg cgatcttccc ggattgtccg
     1501 agttgcgcgc ggcagggctg ctggattcgc ggccgccgcg cgaggggatc gccacccctc
     1561 ttgcgccggc caccgaggat gacaatatcg accgcggcat tcccgccgac gatctgttcg
     1621 aagatgagtg aggtcacagg atgaacggct tcatcaacat gttcacccgt ctgttcatgc
     1681 gccgcatgat gaactggggc atcaacaagg gcatcaaccg catgtcgcgg cgcaagccgg
     1741 gggccacgcc gaagccacag caggccagaa ccaaccgtca ggccgccaag cgtgcccggc
     1801 aggcggcgaa attggcgcgg cggatcggcc gctgagcctc gccttttccg tcgccagccg
     1861 ctagggttcg gcgcatgcgc gacgatcctt tcgacatttt cctggtggcg acgccggggc
     1921 tggaacagcc cttggccgcc gaggcgcgcg cgcttggctg ggtgccagag atccagcccg
     1981 gcggcgtgac gattcgcggc ggctgggcgg atgtctggcg ggccaatctt tggctgcgcg
     2041 gggcgacgcg ggttctggcg cggatcggca gctttcgggc gctgcatctg gcgcagctgg
     2101 acaagcgggc gcggaaattt ctctgggctt cggtgctgcg ccgcgatctg tccgtcaggg
     2161 tcgatgccgt ctgccgcgcc agccgcatct atcacgcggg cgcggcggca cagcgggtcg
     2221 aacgcgccat cgccg
//
LOCUS       DTVW01000017            2282 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1038810, whole
            genome shotgun sequence.
ACCESSION   DTVW01000017 DTVW01000000
VERSION     DTVW01000017.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2282)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2282)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2282
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1038810"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1953)
                     /locus_tag="EYO87_00180"
     CDS             complement(<1..1953)
                     /locus_tag="EYO87_00180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011750046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription-repair coupling factor"
                     /protein_id="HIC64420.1"
                     /translation="MSEQLTLSGAPEGYDAALIAREAAQSGTGAAVIHIARDDRRMQA
                     MRAALAFLAPALPVLDFPAWDTTPYDRISPSADLQAARMATLAGLAQGAIRGPFVLLT
                     TLNAAMQRVPPRDLVAGASFSARVGQRIDEAALRDFLVRMGFVQSPTVTEPGDYAVRG
                     GIIDIFPPGESGPVRLDLFGDVLDGARRFDPETQRTTEKLSRVEIAPMSEVILDEPSI
                     TRFRQNYRAEYGGGTSDPLYEGVSAGRKMAGMEHWLPWFHDRMESLFDYLPAASVVLD
                     DHLGQVALARREMIREQFEARRAALAAKGRSDTVYKPVPPDLIFPPETEWAGWLDAHR
                     VLRLSVLAQPPGPGILDAGGRPGRNFAPERQSENLNLFKVLADHIKALSKDYRVIVAS
                     FSDGARDRLAGLLADEGLTGAREIGDIRDLPESAGALGLAVWPLDEGFVAEGRALGPI
                     AVISEQDVLGDRLIRGAKKRRKAENFLQDTTSLTPGDLVVHVEHGIGRYTGLETIKAA
                     GVPHDCVALEYAGGDRLFLPVENIELLSRYGHEEGLLDRLGGGAWQARKAKLKERIKL
                     IADKLMRVAAERLLRPAPVLEPEDHDWQAFAARFPYSETDDQQAAIEDVAADLAAGRP
                     MDRLIVGDVGFGKTEVAMRAAFIAASQ"
BASE COUNT          385 a          817 c          736 g          344 t
ORIGIN      
        1 ctggcttgcg gcgatgaagg ccgcgcgcat cgcgacctcg gtcttgccga agcccacatc
       61 gccgacgatc agccggtcca tcggccggcc cgcggccaga tccgcggcca cgtcctcgat
      121 tgcggcctgc tggtcgtccg tctcgctata ggggaaacgc gcggcaaagg cctgccagtc
      181 gtggtcctcg ggctccagca ccggggcggg acgcagcagg cgttcggcgg ccacgcgcat
      241 cagcttgtcc gcgatcagct tgatccgttc tttcagtttc gccttgcggg cctgccacgc
      301 gccgccgccc agacggtcca gcagaccttc ctcgtggcca tagcgcgaca gcaattcgat
      361 attctcgacc ggcaggaaca gccggtcccc gcccgcatat tccagcgcca cgcaatcatg
      421 cggcacgccg gcggccttga tcgtctcaag cccggtatag cgcccgatgc catgttcgac
      481 atggacgacc agatcgccgg gcgtcaggct ggtcgtgtct tgcaagaaat tctcggcctt
      541 gcggcgcttt ttcgcgcccc ggatcagcct gtcgcccagc acgtcctgtt ccgagatcac
      601 ggcgatcggc ccaagcgccc gaccttcggc cacgaaaccc tcgtccagcg gccacaccgc
      661 cagcccgagc gcaccggcgc tttccggcag atcacgaata tcgccgatct ccctggcgcc
      721 ggtcagtccc tcatcggcca gcaggccggc cagacggtcc cgcgcgccgt ccgaaaaact
      781 ggccacgatc acacgataat ctttcgataa tgcctttata tgatcggcca gaaccttgaa
      841 caggttgaga ttttcagact ggcgttccgg cgcgaaattg cgcccgggac ggccgccggc
      901 atccagaatg cccggcccgg gcggctgcgc cagcaccgac aggcgcagca cccggtgcgc
      961 gtccagccag ccggcccatt ccgtctcggg cggaaagatc agatcggggg gcacgggctt
     1021 gtagaccgtg tcgctgcgcc ccttggccgc cagcgcggcg cggcgggcct cgaattgttc
     1081 gcggatcatc tcgcgccgcg caagggccac ctgccccaga tggtcgtcca gaacgacgga
     1141 tgcggcgggc agatagtcga acaggctttc catccggtcg tggaaccagg gcagccaatg
     1201 ttccattccg gccatcttgc ggccggcgct gacgccttca tacagcggat cgctggtgcc
     1261 gccgccatat tctgcgcggt aattctgtcg aaaccgggtg atcgacggct cgtccaggat
     1321 cacctcggac atgggcgcaa tctcgacccg gctcagcttt tcggtggtcc gctgggtttc
     1381 ggggtcgaac cggcgcgcgc cgtccagcac atcgccgaac aggtccagcc ggacgggacc
     1441 ggattcgccg ggcggaaaga tgtcgatgat gccgccccgg actgcgtaat cgcccggctc
     1501 ggtcaccgtt ggcgattgca cgaaccccat ccggaccagg aagtcgcgca aggcggcctc
     1561 gtcgattcgc tgaccgacgc gggccgagaa actggccccc gccaccagat cccgcggcgg
     1621 cacccgctgc atcgcggcgt tcagcgtggt cagcagcacg aaaggccccc tgatcgcgcc
     1681 ctgcgccaac cccgccagcg tcgccatccg tgccgcctga agatcggccg atggcgagat
     1741 ccggtcatag ggcgttgtgt cccaggccgg aaagtccagc accggcaggg cgggcgcaag
     1801 gaaggccagg gccgcgcgca tcgcctgcat ccggcggtcg tcgcgggcga tgtggatcac
     1861 ggccgcgcca gtgccggatt gcgcggcctc gcgggcgatc agggcggcat catagccctc
     1921 gggggcgccg gaaagggtca gttgttcgga catggcccgt caggtaaagc gccgcgccgc
     1981 ggagtcaagc gtcacagccc gttggggtga accagcgccc agagcgcgcc ccaaagcgcg
     2041 gtcgccgcga ccgacacgac cgacagcaga aggaccaggc ggcggtgccg gttcatcagc
     2101 cggaccgccc cggcggcgac atctgcgatg ggggtctcgc ccgcctgccc tgcctgcaac
     2161 agcgggatca gccgccgcgc caggcggacg cgcatccaga acagcgccat gaacggcgcc
     2221 atcagcagcg ccaaagcctg cgccatctcc agctcgtagc cgaagcccag aatggccagc
     2281 ga
//
LOCUS       DTVW01000018            2283 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1039341, whole
            genome shotgun sequence.
ACCESSION   DTVW01000018 DTVW01000000
VERSION     DTVW01000018.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2283)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2283)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2283
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1039341"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1671
                     /locus_tag="EYO87_00185"
     CDS             <1..1671
                     /locus_tag="EYO87_00185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010400167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HIC64421.1"
                     /translation="PAVRDAAAARARTDQALTAALHDHAAHLTREKAALESILADFGA
                     GALMTDPHGRVVFYNASAARLLPGLALDRPLHRHIAPGALEAAAARLQAGAEATDLVC
                     LTAQGTRLSGRMRRLDEGTLLILHETAPPRPAPRDALEALRRHAATLVPMLNALDGPI
                     PPALAAAIRAEGQGLARATRRLSEVMTDAPPTARAGLNELAAGLDRATDLPPLSLLAE
                     ADAIGALLRLLQDRLRAMGQAPALRVAADDPGEAHLLLEWDGSALPMDRLEDWLRQAP
                     DPAQPDRSGADILAAHGTGIWPEADDSRARLVLPLRRAPDRIGGAGLTYDFALPSRAA
                     ASSRLADLTCVVFDTETTGLDPARDRIVQIAGIRIAGGRLTGERFETLVDPGRRIPAR
                     ASAIHGITDQMVAGAPDMRTALMAFHHFAEDAVLVCHNAPFDMGLLRAATPESGAQFD
                     NRVLDTVLLSAMVWGGTVAHTLDALTERLGIAIPPDQRHSAMGDAIATAQAFLRLIPA
                     LEAKGIARFEDTLAEARRHRRLIGNANPDHNSISGASGSRGTEGPSGD"
     gene            complement(1611..2081)
                     /locus_tag="EYO87_00190"
     CDS             complement(1611..2081)
                     /locus_tag="EYO87_00190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64422.1"
                     /translation="METRPFALATLLLLLPLPAPAQAPYQPPPADAPRRSQDAEDPTD
                     LIGRGLGMLFQDLWNDVGPDLNRLGEDMSGALSRMAPVLKDLAVLVDDLGNYETPRRL
                     ENGDIVIRRKPGAPPPPPIGENLRDFPDPDAPGADQSPDGPSVPRDPDAPEIEL"
     gene            complement(2211..>2283)
                     /gene="ffs"
                     /locus_tag="EYO87_00195"
     ncRNA           complement(2211..>2283)
                     /ncRNA_class="SRP_RNA"
                     /gene="ffs"
                     /locus_tag="EYO87_00195"
                     /product="signal recognition particle sRNA small type"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00169"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00169"
BASE COUNT          328 a          799 c          824 g          332 t
ORIGIN      
        1 ccggccgtgc gcgacgcggc ggcggcgcgg gcgcggacgg atcaggcact gaccgccgcc
       61 cttcacgatc acgccgccca tctgacgcgg gaaaaggcgg cgctggaatc catcctcgcc
      121 gatttcggcg ccggcgcgct gatgaccgat ccgcacgggc gggtggtgtt ctacaatgct
      181 tcggccgcgc ggctgctgcc ggggcttgcg ctggaccgcc cgctgcatcg ccatatcgcg
      241 cccggcgcgc tggaggccgc cgccgcgcgg ttgcaggcag gcgccgaggc gaccgacctg
      301 gtctgcctga ccgcgcaagg gacacgattg tccggccgga tgcggcggct ggatgaaggc
      361 acgctgctga ttttgcatga gacggccccg ccccggcccg cgccccgcga cgcgctggag
      421 gcgctgcgcc gacacgccgc gacactggtg ccgatgctga acgcgctgga cggaccgatc
      481 ccgcctgcgc tggcggccgc gatccgggcc gaggggcagg gcctggcccg cgccacccgc
      541 cgcctgtccg aggtcatgac cgacgcgccg cccaccgccc gcgccgggct gaacgaactg
      601 gccgcgggac tggatcgcgc gaccgatctg ccgccgctgt cgctgctggc cgaggcggat
      661 gcgatcggcg cgctgctgcg tcttttgcag gatcggctgc gggcgatggg ccaggcgcct
      721 gcgctgcgtg tcgcggcgga tgatccgggc gaggcgcatc tgctgctgga atgggacggc
      781 tcggcactgc cgatggaccg gctggaggac tggctgcgac aggcgccgga tccggcgcag
      841 cccgaccgca gcggcgccga catcctggcc gcgcatggca ccggcatctg gcccgaagcc
      901 gacgattcgc gtgcccggct ggtcctgccc ctgcgacggg ccccggaccg cattggcggt
      961 gccgggctga cctatgattt cgcgctgccc tcgcgcgcgg cggcctcgtc gcggctggcg
     1021 gatctgacct gcgtggtctt cgataccgag acgaccggac tggatccggc ccgggaccgg
     1081 atcgtgcaga tcgcggggat ccgtatcgcg ggcggccgcc tgaccggcga gcggttcgag
     1141 acgctggtcg atccgggacg ccgaatcccc gcgcgcgcca gcgccattca tggcatcacc
     1201 gaccagatgg tcgccggcgc gcccgacatg aggaccgcgc tgatggcgtt tcaccatttc
     1261 gccgaggatg ccgtgctggt ctgccacaac gcgcccttcg acatgggcct gctgcgcgcc
     1321 gccacacccg aatcgggggc gcagttcgac aaccgggtgc tggacaccgt tttgctgtca
     1381 gcgatggtct ggggtggcac ggtcgcgcac acgctggacg cgctgaccga aaggctgggg
     1441 atcgcgattc cgcccgatca gcgccacagc gccatgggcg atgcgatcgc caccgcgcag
     1501 gcatttctgc ggctgattcc cgcgctggaa gccaagggca tcgcgcgctt tgaggatacg
     1561 ctggccgagg cccgccggca tcgccgcctg atcggcaatg ccaatcccga tcacaattcg
     1621 atctcggggg catccgggtc gcgcggcacc gaaggcccgt ccggagattg atcggcgccc
     1681 ggcgcatccg gatccgggaa atcgcgaaga ttctcgccga tgggcggcgg cggcggggcg
     1741 cccggtttgc ggcggatcac gatatcgccg ttctccagcc gccggggcgt ctcgtaattg
     1801 ccgagatcat cgaccagcac ggccagatcc ttcagcaccg gcgccatccg cgacagcgcg
     1861 cccgacatgt cctcgcccag ccggttcaga tcggggccga catcgttcca cagatcctga
     1921 aacaacattc ccaatccgcg cccgatcaga tcggtcggat cctcggcatc ctgcgaccga
     1981 cgcggcgcat cggccggcgg cggctggtag ggcgcctgcg ccggggcggg caggggcagc
     2041 agcagcaaca gggtggccag ggcgaagggg cgcgtctcca tgccgcaatg atgggcgcga
     2101 caccgccacg acgcaagacg gaatggatac ggaacggatc gtcaatgcgc cttgcggcca
     2161 tgatcgcggt tgcgcgatgg catcgcggcc ggttccgatc cgtggtttga gggtgagagg
     2221 ctggacaacg acccaggcgg ggctcgttac ggctgcttcc ttccggacct gaccggattg
     2281 gcg
//
LOCUS       DTVW01000019            2450 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1040650, whole
            genome shotgun sequence.
ACCESSION   DTVW01000019 DTVW01000000
VERSION     DTVW01000019.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2450)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2450)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2450
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1040650"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            74..475
                     /locus_tag="EYO87_00200"
     CDS             74..475
                     /locus_tag="EYO87_00200"
                     /inference="COORDINATES: protein motif:HMM:PF02518.24"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HIC64423.1"
                     /translation="MFLANLTGHLAEIAPSHVRLQVKADNLAVSSEQAVAVGTLVNEF
                     VQNSFKHAFPDGRHGMVHVTAERGSGDGKVQLTCRDDGVGLPDIALGGQDGLGMQIAA
                     IISAELQGELNIQSSEGEGLTIGIEFVSAAG"
     gene            complement(509..1960)
                     /locus_tag="EYO87_00205"
     CDS             complement(509..1960)
                     /locus_tag="EYO87_00205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010391959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HIC64424.1"
                     /translation="MSTLLDKRKFYIDGQWVEPATPNDLEVIDPSTEEPVAVISLGNQ
                     ADTDAAVAAARRALPSWSRTAPAERLAHIEKILEVYDRRAEDMAWAISHEMGAPQDMS
                     LEDQVGAGRGHIRNFITAFKDFKFIRPLGDHAPSSMTAWEPVGVVGLITPWNWPMNQV
                     TLKVIPAILAGDTCVLKPSEIAPLSSLLFAEILHEAGLPKGVFNLVNGDGAGVGSQLS
                     THPEVDMISFTGSTRAGIAITKAAADSLKKVVLELGGKGANIVFADADDKAVARGATH
                     CFYNSGQSCNAPTRMLVERSVYDRAVETAAQVAEKTGVASAHQPGTHIGPVVSKGQWE
                     KIQDLIQKGIDEGARLVAGGTGLPEGVNRGYFVRPTVFADVSNDMTIARQEIFGPVLS
                     IIPFDSEEEAIQIANDTPYGLTNYVQTQDGARRNRVARQLRSGMVEMNGEPRGPGSAF
                     GGVKASGRAREGGVMGLEEFMDSKAISGWDRDA"
     gene            2130..>2450
                     /locus_tag="EYO87_00210"
     CDS             2130..>2450
                     /locus_tag="EYO87_00210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010391960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redoxin domain-containing protein"
                     /protein_id="HIC64425.1"
                     /translation="MSLRINDTAPDFTAESTEGQIRFHDWLGDSYAILFSHPRDFTPV
                     CTTEFGAVAQLAPEFEKRNTKVLGVSVDSVEDHKKWKSDIEKVAGAPANFAIIDDTAL
                     NVAKA"
BASE COUNT          418 a          821 c          768 g          443 t
ORIGIN      
        1 acggacggcc aattggccgg tcttgccggg ctatctgctt cggctgcgcg gatttatagt
       61 ctccagttcg agtatgttct tggccaacct gaccgggcat ctggccgaaa tcgcgccctc
      121 gcatgtccgg ctgcaggtca aggccgacaa tcttgccgtc tcgtccgaac aggccgtcgc
      181 ggtgggtacg ctggtcaacg aattcgtgca gaattccttc aagcacgcct tcccggatgg
      241 tcgtcacggc atggttcacg tcaccgccga acgcggcagc ggcgatggca aggtgcaact
      301 gacctgccgc gacgacggcg tcgggctgcc cgacatcgcc ctgggcggac aggacggtct
      361 ggggatgcag atcgccgcga tcatctcggc cgagttgcag ggcgagctga acatccagtc
      421 cagcgaaggc gagggcctga ccatcgggat cgaattcgtc agcgcggcgg gctgagaccg
      481 gcccgccgcg ccgcgcgcct cgtgaggatc aggcgtcgcg atcccagccg ctgatcgcct
      541 tggaatccat gaattcctca aggcccatga caccgccctc gcgggcccgt cccgatgcct
      601 tgacgccgcc gaaggccgaa cccggcccgc gcggctcgcc gttcatctcg accatgcccg
      661 aacgcaattg ccgggccacg cgattgcgcc gtgcgccgtc ctgcgtctgg acgtagttgg
      721 tcagcccata gggcgtgtca ttggcgatct ggatcgcctc ttcctcgctg tcgaagggaa
      781 tgatcgacag gaccggacca aagatttcct gccgggcgat ggtcatgtcg ttgctgacat
      841 cggcaaagac cgtgggacgg acgaaatagc cccgattgac gccttcgggc aatccggtgc
      901 cgccggcgac caggcgcgcg ccctcgtcga tgcccttctg gatcagatcc tggatctttt
      961 cccactgacc cttgctgacg accggcccga tatgcgtgcc gggctgatgc gccgatgcga
     1021 cgccggtctt ttcggccacc tgcgccgccg tctcgaccgc gcgatcatag accgaacgtt
     1081 cgaccagcat ccgcgtcggc gcgttgcagg actggccgct gttgtagaag caatgtgtgg
     1141 ccccgcgcgc caccgccttg tcgtcggcat cggcgaagac gatgttggca cccttgccgc
     1201 ccagttccag caccaccttc ttcaggctgt ccgccgccgc cttggtgatc gcgatccccg
     1261 cccgagtcga gccggtaaag ctgatcatgt caacctcggg atgggtcgaa agctggctgc
     1321 ccacgcccgc tccatcgccg ttcaccaggt tgaagacgcc cttgggcagc cccgcctcgt
     1381 gcagaatctc ggcaaagagg agcgacgaga ggggggcgat ttccgagggt ttcagcacgc
     1441 aggtatcgcc cgcgaggatc gccggaatca ccttcagcgt gacctgattc atcggccagt
     1501 tccacggcgt gatcaggccg acgacgccga ccggctccca tgccgtcatc gaggacgggg
     1561 catgatcgcc aagcgggcgg atgaacttga aatccttgaa cgcggtgatg aagttgcgga
     1621 tatgcccgcg tccggcgcca acctggtcct ccagcgacat gtcctgcggc gcgcccatct
     1681 cgtgactgat cgcccaggcc atgtcctcgg cccgcctgtc atagacttcc agaatcttct
     1741 cgatatgggc cagcctttcg gcgggcgcgg ttcgcgacca cgacggcaag gcgcgcctgg
     1801 cggccgcgac ggcggcatcg gtatcggcct ggttgcccag actgatcacc gcgaccggct
     1861 cttcggtcga ggggtcgatg acctccagat cgttgggcgt ggccggctcg acccattggc
     1921 cgtcgatata gaatttgcgc ttgtccagca gcgtgctcat cgcgatctcc gtttctgacc
     1981 tggcatgaag gtggcaccgc cgccgggcgc ctgcaagggc cagcggcggt caggcggcgc
     2041 gggcggattc gccgcggccg gcggcctctg gcattcgttc gcgcgctgcc tatgttggaa
     2101 acgacgcaat caaacggaaa ggacgtccca tgtccctgcg catcaatgac accgctccgg
     2161 atttcaccgc cgaatccacc gagggccaga tccggttcca cgactggctg ggcgacagct
     2221 atgccatcct gttcagccat ccgcgcgatt tcaccccggt ctgcaccacc gaattcggcg
     2281 ccgtggcgca actggccccg gaattcgaga agcgcaatac caaggtcctg ggtgtctcgg
     2341 tcgattcggt cgaggaccac aagaagtgga aatcggacat cgagaaggtc gccggagcgc
     2401 ccgctaattt cgccatcatc gacgacaccg cgctgaacgt ggccaaggcc
//
LOCUS       DTVW01000020            1368 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1048313, whole
            genome shotgun sequence.
ACCESSION   DTVW01000020 DTVW01000000
VERSION     DTVW01000020.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1368)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1368)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1368
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1048313"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(56..1192)
                     /locus_tag="EYO87_00215"
     CDS             complement(56..1192)
                     /locus_tag="EYO87_00215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-containing alcohol dehydrogenase"
                     /protein_id="HIC64426.1"
                     /translation="MTAFAFATATEILFGRGQADGALGRIAAMGRRVLLVHGRDAGRS
                     AGLRAGLRAEGCAIAGFPVEAEPDMALIDAGVDAGRGVDVVVAMGGGAVIDAGKAIAA
                     LIPATRPMLDHLEVVGQGLPLDHPPLPFVAMPTTAGTGAEVTRNAVIGVPEHRRKVSL
                     RDARMLPRLAIVDPGLTDGCPRGVTLASGLDAITQVIEPYVGTRANPLTDALCRDAIP
                     RGLAAIRRLMEDEDAAARDEMAWVSLCGGLALANAGLGAVHGLAGPLGGLTGAGHGAI
                     CGTLLPHVLVANRRGVADPARLDQVGQWIGAAFDAPDAGLEQAAGMLARWSREAGLPR
                     LHDLGIDGAAQRAAAEAAASSSSMKANPAALSPADLRAVMAEAT"
     gene            complement(1219..>1368)
                     /locus_tag="EYO87_00220"
     CDS             complement(1219..>1368)
                     /locus_tag="EYO87_00220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019995757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase"
                     /protein_id="HIC64427.1"
                     /translation="RGGAVDNEICLELSFREREPNDREVIPQIAESVAFWAPHIDTGA
                     DTLNI"
BASE COUNT          199 a          536 c          454 g          179 t
ORIGIN      
        1 caggccgcgc ggattgccag gctttgttcc gggtcgatcc ccgttccccg cgccatcagg
       61 tcgcctccgc catcaccgcg cgcagatcgg cgggcgacag cgcggccgga ttggccttca
      121 tcgaggatga cgacgcggca gcctcggccg ctgcccgctg cgccgcgccg tcgatcccca
      181 gatcgtgcag ccggggcaaa ccggcctcgc gcgaccaccg cgccagcatc ccggcggcct
      241 gttccagacc cgcatccggc gcatcgaaag ccgcgccgat ccattgcccg acctgatcca
      301 gccgcgcggg atcggccacg ccgcgccggt tcgcgaccag cacatgcggc agcagggtgc
      361 cgcagatcgc gccatggccg gcgccggtca gcccgcccag cggcccggcc agtccgtgga
      421 ccgcgcccag ccccgcattg gccagcgcca gcccgccaca caggctgacc caggccatct
      481 cgtcgcgcgc ggccgcgtcc tcgtcttcca tcagccgccg gatcgcggcc aatccgcgcg
      541 ggatcgcatc gcggcacagc gcgtcggtca gcggattggc gcgggtgccg acatagggct
      601 cgatcacctg cgtgatcgca tcgagtccag aggccagcgt caccccgcgc ggacagccat
      661 ccgtcaggcc cggatcgacg atcgcaaggc ggggcagcat ccgggcgtcg cgcaggctga
      721 ccttgcggcg atgctcgggc acgccgatga ccgcgttgcg cgtcacctcg gcgcccgtcc
      781 ccgccgtcgt cggcatggcg acgaagggca agggcggatg atccagcggc aagccctggc
      841 ccacgacctc cagatgatcc agcatcggcc gggtggcggg gatcagcgcg gcgatcgcct
      901 tgccggcatc gatcaccgcg ccgccgccca tcgccaccac gacatccacg ccgcgcccgg
      961 catcgacacc cgcgtcgatc agggccatgt cgggctcggc ttcgacggga aaaccggcga
     1021 ttgcgcagcc ctcggcccgc aaccccgccc gcaatccggc gctgcggccg gcatcgcggc
     1081 catggaccag cagcacccgg cgccccatcg ccgcgatccg gccgagggcg ccatccgcct
     1141 gcccgcgccc gaacaggatc tcggtggcgg tggcaaaggc gaaagcggtc atcggcatct
     1201 cctgtccggg ttcggacgtc agatattcag cgtatcggcc ccggtgtcga tatggggcgc
     1261 ccagaacgcc acgctttcgg cgatctgggg gatgacctcg cggtcgttcg gctcgcgttc
     1321 ccggaagctg agttcgaggc agatctcgtt gtcgaccgcc ccgccccg
//
LOCUS       DTVW01000021            4947 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1048906, whole
            genome shotgun sequence.
ACCESSION   DTVW01000021 DTVW01000000
VERSION     DTVW01000021.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 4947)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4947)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4947
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1048906"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            11..1132
                     /locus_tag="EYO87_00225"
     CDS             11..1132
                     /locus_tag="EYO87_00225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020021162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HIC64428.1"
                     /translation="MAVRNEVGLAIIGCGTIGRIRAIIARDYPGIGWLGLCDTNRGLG
                     KKLSADSEADFFTTDFHELLDRPEVSAVIIATDENNHAAPTLAAAERKQSLFIEKPIA
                     TDARESLAILRAIEEAGVDAVMGYTQRFRRRFLTVKERLVTGQIGEVHSVVTRAFMNR
                     MVPIATVSRTQNRRHLTPMVVSGTHSLDMSMWLMEAKTPVSVYAKSTDKVMSRWGTKD
                     STFGIFEMDDGAIFSMNICWGLPEVWPGSVYGLEIGIVGAEGVIDIEDTHRDLVLATN
                     VAQGGGYVPDGYEPPARHVDFLTSYPPGDLHMNQLWGPMREETVNWYQRLCMGVPTPH
                     ATAQDGHRNLILTMAMDLSARRGREVRLPVDPDELMAED"
     gene            1243..2349
                     /locus_tag="EYO87_00230"
     CDS             1243..2349
                     /locus_tag="EYO87_00230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011456060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HIC64429.1"
                     /translation="MQLGFFTMPIHPLEKDWRQSLREDQEAFVLADELGFAEGYVGEH
                     VTDVAENITSCMVFIASLAGRVRQMRLGTGTVNLPNNHPAQVAAQIAMLDHLLDGRLN
                     FGISPGGLLSDSEIFGNLDHDRNAMFLEAIDMILALWSKDAPYDLRGNFWNISTERTL
                     MAEIGQGIVGKPLQRPHPPIIVTAVAPFSKGVTAAAARGWDPISANFLMPKWVASHRG
                     CYLDGCKQGGRPGDLANWRVAKSIFVADDMATARDYVTRPDSPYQYYYRSLLTKLKKN
                     GRANLFKEDQSMSDDEVTLDYVMERLVTYGTPDKVAEELLAFRELTGQFGTLLYAGHD
                     WADPELARRSKILMAEKVLPLVNKAEKDQLKAAI"
     gene            2346..3131
                     /locus_tag="EYO87_00235"
     CDS             2346..3131
                     /locus_tag="EYO87_00235"
                     /inference="COORDINATES: protein motif:HMM:PF00561.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HIC64430.1"
                     /translation="MTRAIVKSGEARLSVKVEGPVGKPWILLSNSLATDLHMWDGQIG
                     FLAETHRVVRYDTRGHGQSTAPQGPYDLDMLVEDMLAVLDHVGADRADVMGLSLGGMT
                     ALGLGLAHPDRVRRMVVCDARADNPPPFVASWDDRIAAIERGGMAAIVSGTLERWFTG
                     RASADLRVRAEAMILATAVPGFAGCARALQGLNYLHRLGELTVPVRYVVGSEDMAAPV
                     AAMQAMADATPGARLTVLPGLAHIPAMEDPAAFQDAVMNWLRA"
     gene            3145..4140
                     /locus_tag="EYO87_00240"
     CDS             3145..4140
                     /locus_tag="EYO87_00240"
                     /inference="COORDINATES: protein motif:HMM:PF01408.20"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HIC64431.1"
                     /translation="MLNIAIAGFGWWGRHILTRLQGHDRLSVLAVAEPDQSLHADIRA
                     MGAEAVSGFDGVLSDPRVQAVVLTTPHMMHEEQVVAAARAGKHVFCEKPLAMTAASAR
                     CAVLACREAGVVLGIGHELRFDPAMRRLKALVSAGDLGTIMHAEAAFSHNKLAGLPGD
                     GWRTSKSMSPGAGMTGMGIHLTDLMIWLFGPVETVQAQVRDRTLGWPTGDMVVAQLGF
                     AAGNTAHFQAILNTPHYMRFAVFGADGWAEARYSSHPDTPGGQIEWSLCRKGGAPERE
                     VLDWSDAVVSNLTAFAQAVTGRHDYPWSDAELIGNIAVYEAIVQSSDSGETVRLG"
     gene            complement(4220..4945)
                     /locus_tag="EYO87_00245"
     CDS             complement(4220..4945)
                     /locus_tag="EYO87_00245"
                     /inference="COORDINATES: protein motif:HMM:PF00701.20"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrodipicolinate synthase family protein"
                     /protein_id="HIC64432.1"
                     /translation="MLEKLVAAGVPADVLMPGVGLPSLMDTITLTRHALSLGCGGVLA
                     LPPFYYKPVSVEGLYAWYAAVIDGVGSSELGLWLYHIPQNTGVGIPHDLIERLIRDFP
                     NTVLGIKDSSGDWPNTEAMLRRFPGFSIFPSSEAMLVKSHALGGAGCITASGNLNPGG
                     IGALIDALGTPEADALQDKVARLRTIVTGFPLIPAVKALLAAQMNDPRLAVLRPPLDA
                     LPQADLATLRKRMADAGWSLPDA"
BASE COUNT          909 a         1522 c         1631 g          885 t
ORIGIN      
        1 aggaaaccgc atggcggtaa ggaatgaagt cggtctcgcc atcataggct gtggcaccat
       61 cgggcggatc cgcgcgatca tcgcgcggga ttatccgggt atcggctggc tgggcctttg
      121 cgacaccaac cgcgggcttg gtaaaaagct ttcggccgac agcgaggcgg atttcttcac
      181 gacagatttc cacgaattgc ttgaccgccc cgaggtctcg gcagtcatca tcgccactga
      241 cgagaacaac cacgcagcgc cgacgctggc tgcggccgaa cgcaagcaat cgctgttcat
      301 cgaaaagccg atcgccaccg acgcgcgaga atcgctggcc atcctgcgcg cgatcgaaga
      361 ggccggggtg gatgcggtca tgggctatac acagcgtttc cgccgccggt tcctgaccgt
      421 caaggaacgt ctggtcaccg gtcagatcgg tgaggtgcat tccgtggtga cgcgcgcgtt
      481 catgaacagg atggtcccca tcgccaccgt ctcgcgcacg cagaaccggc ggcacctgac
      541 gccgatggtg gtttcgggca cgcattcgct ggacatgtcg atgtggctga tggaggccaa
      601 gacgccggtg tcggtctatg cgaaatcgac cgacaaggtc atgtcgcggt ggggaacaaa
      661 ggattccacc ttcggcatct tcgagatgga cgatggtgcg atcttttcca tgaacatctg
      721 ctggggcctg cccgaggtct ggccgggatc cgtctacggg ctggagatcg gcatcgtcgg
      781 ggccgagggc gtgatcgata tcgaggatac gcatcgcgac ctggttctgg cgacgaatgt
      841 cgcgcaaggc ggcggctatg ttcccgacgg ctacgaaccg cccgcaaggc atgtcgattt
      901 cctgaccagc tatccgccgg gcgacctgca catgaaccag ctttggggcc ccatgcggga
      961 agaaacggtc aattggtatc agcgtctgtg catgggcgtg cccacgcccc atgccaccgc
     1021 gcaggacggc caccgcaacc tgattttgac catggcgatg gatctttcgg cgcggcgtgg
     1081 tcgtgaggtg cgcctgccgg tcgatccgga cgagttgatg gccgaggact gacaccagca
     1141 cgcaccccgc catgccgaaa ccggatggcg ttcatcaaac cttctcgttt ctcttgctgc
     1201 gcggcgcgtc ggtaagatcg ggcaaacaca gtggagacaa tcatgcagct tgggtttttc
     1261 accatgccta tccaccccct cgaaaaggat tggcgccaga gcctgcgcga ggatcaggag
     1321 gcattcgtcc tggccgacga actgggcttt gcagagggat atgtcggcga gcatgtcacc
     1381 gacgtggcag aaaacatcac ttcgtgcatg gttttcattg cctcgctggc cggccgcgtg
     1441 cggcagatgc ggctcgggac cggcacggtc aacctgccca acaaccaccc ggcacaggtc
     1501 gccgcgcaga tcgccatgct ggatcatctg ctcgatggcc gtctgaactt cggcatcagt
     1561 ccgggcggat tgctgtcgga ttccgagatc ttcggcaacc tcgaccacga ccgcaatgcg
     1621 atgtttctcg aagcgatcga catgatcctg gcactttggt ccaaggacgc gccctatgat
     1681 ctgcgcggca atttctggaa catctcgacc gaacgcacgc tgatggccga gatcggccag
     1741 ggaatcgtcg gcaagccttt gcaacgcccg catccgccca tcatcgtgac ggccgtcgcg
     1801 cctttttcca agggcgtcac cgccgccgct gcacgtggct gggatccgat ctcggcgaat
     1861 ttcctgatgc cgaaatgggt cgcttcgcac cgcggctgct atctggacgg atgcaagcag
     1921 ggcggaaggc cgggcgatct ggccaactgg cgggtcgcca aaagcatctt cgtggccgac
     1981 gacatggcca ccgcgcgcga ttatgtcacg cgaccggaca gcccctatca gtattactac
     2041 cggtcgcttc tgaccaagct caagaagaat ggccgggcga acctgttcaa ggaagaccag
     2101 agcatgtcag acgacgaagt gacgctggat tacgtcatgg aacgcctggt gacctacggc
     2161 acccccgaca aggtcgccga agaattgctg gcgttccgcg aactgaccgg gcaattcggc
     2221 acccttcttt atgcgggcca tgactgggcc gacccggaac tggcgcgacg ttcgaagatc
     2281 ctgatggcgg agaaggtcct tccgctcgtc aacaaggccg agaaagatca gctgaaggcc
     2341 gcgatatgac ccgtgccatc gtgaaatcgg gtgaggcgag gctttcggtc aaggtcgagg
     2401 gcccggtcgg caagccctgg atcctgctgt cgaattctct ggcgaccgac ctgcacatgt
     2461 gggacggcca gatcggcttt ctggccgaaa cgcatcgcgt ggttcgctat gacacgcgcg
     2521 gacatgggca aagcacggcg ccgcaggggc cctatgatct cgacatgctg gtggaagaca
     2581 tgctggcggt tcttgaccat gtcggcgccg accgcgccga cgtgatggga ttgtcgctgg
     2641 gcgggatgac ggccctggga ctgggcctgg cgcatccgga tcgggtgcgg cgcatggtgg
     2701 tttgcgacgc acgcgccgac aatccgccgc ctttcgtggc cagttgggac gatcggatcg
     2761 ccgcaatcga aaggggcggc atggctgcca tcgtgtcggg cacgctggaa cgctggttca
     2821 ccggcagggc ctctgccgat ctgcgggtgc gggccgaggc catgatcctc gccaccgcgg
     2881 tgccgggttt tgccggttgc gcccgcgcat tgcaggggct gaactatctg catcggcttg
     2941 gtgagctgac cgtgccggtg cgatatgtgg ttggcagcga ggacatggcc gcgccggtgg
     3001 ccgccatgca ggccatggcg gatgccaccc cgggcgcgcg cctgacggtt ctgcccggcc
     3061 tggcccatat ccccgccatg gaggatccgg ctgcctttca ggatgccgtg atgaactggc
     3121 ttcgcgcatg aggagaagaa ggggatgctg aacatcgcga ttgcgggctt tggctggtgg
     3181 ggacgtcaca tcctgacccg cctgcaaggc catgacagac tgagcgtcct ggccgtcgcc
     3241 gagcccgatc agtcgcttca tgccgatatc cgcgccatgg gggccgaggc cgtgagcggc
     3301 tttgacggag tgctgtccga tccgcgcgtg caggccgtgg tgctgaccac accacacatg
     3361 atgcacgagg aacaggtcgt cgcggcggcg cgggcgggca aacatgtgtt ttgtgaaaaa
     3421 ccgctggcca tgacggccgc cagcgcccgc tgcgccgtcc tggcctgccg ggaagccggc
     3481 gtggtgttgg ggatcgggca cgagctgcgt ttcgatccgg cgatgcggcg gctcaaggcg
     3541 ctggtatcgg ctggcgatct gggcacgatc atgcacgccg aggccgcctt cagccacaac
     3601 aagcttgccg gactgccggg ggacgggtgg cgcacgtcga aatcgatgtc tcccggcgcc
     3661 ggcatgaccg gcatgggcat ccacctgacc gatctgatga tctggctgtt cggcccggtc
     3721 gagacggttc aggcgcaggt ccgcgaccgc acgctgggat ggccgaccgg agacatggtc
     3781 gttgcccaac tgggcttcgc ggcgggtaac accgcccatt tccaggccat cctcaacacg
     3841 ccgcactaca tgcgttttgc ggtattcggc gcggatggct gggccgaggc acgctattcc
     3901 agccatcccg acacgccggg cggtcagatc gaatggtcgc tttgccgaaa gggcggcgcg
     3961 ccggaacgcg aggttctgga ctggagcgat gcggtcgtgt ccaatctgac ggccttcgcg
     4021 caggcggtga cagggcggca cgactatccc tggagcgatg cggaactgat cggcaacatc
     4081 gccgtctacg aggcaatcgt gcagtcatcc gacagcggcg agaccgtgcg gctggggtga
     4141 gctttcggtc cggccaatgc cgataacagc ctgcctggcc cggccgggtg gatcgttccc
     4201 ccgccttcct tcatgattct caggcgtccg gcagggacca gcccgcatcc gccatccgct
     4261 tgcgcagcgt agcgagatcg gcctgtggca gggcgtccag cggtgggcgc agcacggcaa
     4321 gcctcgggtc gttcatctgg gccgccagca gcgccttgac tgccgggatc aacggaaagc
     4381 ccgtcacgat cgtgcgcagc cgggcaacct tgtcctgcaa tgcgtcagcc tcgggcgtgc
     4441 caagggcatc gattaatgcg ccgatcccgc cgggattgag gttgccggat gcggtgatgc
     4501 atcccgcacc gccgagggcg tgagatttca caagcatcgc ttccgaagac gggaagatgc
     4561 tgaacccggg aaagcggcga agcatcgcct cggtattcgg ccagtcgccg gaactgtcct
     4621 tgatgccaag gaccgtgttc gggaaatcgc ggatcagccg ctcgatcaga tcgtgcggaa
     4681 tgccgacgcc ggtattctgg gggatatggt acagccacag ccccagttcg gaagaaccga
     4741 cgccatcgat gaccgcggca taccaggcgt aaagcccttc gaccgaaacg ggcttgtaat
     4801 agaagggcgg caacgccaga accccgccgc acccaagcga cagcgcgtgt ctggtcagcg
     4861 tgatcgtatc catcagtgat ggcaggccaa ccccgggcat cagaacgtcg gccggaacac
     4921 ctgcggccac cagtttttcc agcagcg
//
LOCUS       DTVW01000022            1700 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1049372, whole
            genome shotgun sequence.
ACCESSION   DTVW01000022 DTVW01000000
VERSION     DTVW01000022.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1700)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1700)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1700
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1049372"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>1700
                     /locus_tag="EYO87_00250"
     CDS             <1..>1700
                     /locus_tag="EYO87_00250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011750678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HIC64433.1"
                     /translation="RKDLPGVVTYRDLEDTDAMIEAGRAGRDAVVIGGGLLGLEAAAG
                     MAARGAKVTVIHLMGHLMERQLDPAAGYLLQRDLERRGIAVHCKGATKAILGHDRAEA
                     VLLEDGTVYPADLVCMAVGIRPETRIAVDARLEVERGITVDDGLRTSDPNIFALGECV
                     EHRGQLFGLVAPLYDQARALARTLSGETAEFRPVQTATKLKVTGCDLFSAGDFAEAQG
                     REDIVFRDPGRGIYKRLVLQDNRVIGVVMYGDTADGNWFYGLIKDGTDIEQMRDTLIF
                     GPGFQGGSRPDPMAAVAALPPEAEICGCNGVCKGSIVNAVQGGATTLDAVRAGTKASG
                     SCGTCTSLVEQVMRLTLGDGFAAAAPGGMCKCTDHSHEDVRRLIRSMGLKSIPAVMQE
                     LGWKSVGGCRSCRPALNFYLLAEWPLEYRDDRQSRFVNERNHANIQKDGTYSVVPRMW
                     GGVTTPDELRAIADAADKYGVPMVKVTGGQRIDLLGVRKEDLPLMWADLNRAGLVSGH
                     AYSKGLRTVKTCVGSEFCRFGTQDSTGLGIRLEKLLWGSWTPHKFVLMVICYLVKQNS
                     "
BASE COUNT          294 a          524 c          591 g          291 t
ORIGIN      
        1 cacgcaagga tctgcccggc gtcgtgacct atcgcgatct ggaagacacc gatgcgatga
       61 tcgaggcggg cagggccggc cgggatgcgg tcgtgatcgg cggcggcctg ctgggcctgg
      121 aagccgctgc cggcatggct gcgcgcgggg cgaaggtcac cgtcattcac ctgatgggcc
      181 acctgatgga acgccagctt gatcctgctg cgggctatct gctgcaacgg gacctggaac
      241 ggcgtggcat cgccgtccac tgcaaggggg ccactaaggc gatcctgggt cacgaccggg
      301 ccgaggcggt gctgctggaa gacggcaccg tctatcccgc cgatctggtc tgcatggccg
      361 tgggcatccg ccccgagacc cgcatcgccg tggacgcacg gctggaggtc gagcgcggca
      421 tcaccgtcga tgacggcctg cgcaccagcg atccgaacat cttcgcactt ggcgaatgcg
      481 tggaacatcg cggccagctg ttcggccttg tcgcgccgct ttacgatcag gctcgggcgc
      541 tggcccggac cctgtccggc gagacggccg aattccgccc ggtccagacc gcgaccaaac
      601 tgaaggtgac cggctgcgat ctgttcagcg cgggcgattt cgccgaggcg cagggccgcg
      661 aggatatcgt gttccgcgat ccggggcgtg gcatctacaa gcggctggtc ctgcaggaca
      721 accgcgtcat cggcgtggtc atgtatggcg acacggctga cggcaactgg ttctacgggc
      781 tgatcaagga cggcaccgat atcgagcaga tgcgcgacac gctgatcttc ggtcccggct
      841 tccagggagg gtccaggccg gaccctatgg cggccgttgc agccttgccg cctgaggcgg
      901 aaatctgtgg ctgcaacggc gtctgcaagg gcagcatcgt caatgccgtg caagggggcg
      961 cgaccacgct ggacgcggtt cgcgccggca ccaaggccag cggatcctgt ggcacctgca
     1021 ccagcctcgt ggagcaggtg atgcgtctga cgctgggcga tggctttgcc gccgccgcgc
     1081 ccggcggaat gtgcaaatgc accgatcaca gtcacgagga tgtgcgccgg ctgatccggt
     1141 cgatgggtct gaaatccatc cccgccgtca tgcaggaact tggctggaag tccgtcggcg
     1201 gctgccgttc ctgccgtccg gcgctgaatt tctatctgct ggccgaatgg ccgctggaat
     1261 accgggacga ccggcaatcg cgcttcgtga acgaacgcaa ccacgccaat atccagaagg
     1321 acggcaccta ttcggtggtg ccacgcatgt ggggcggcgt caccacaccg gacgaattgc
     1381 gggccatcgc ggatgcggcc gacaagtatg gcgtgccgat ggtcaaggtc accggcggcc
     1441 agcggatcga cctgctgggc gtgcgcaagg aggatttgcc gctgatgtgg gccgatctga
     1501 accgggccgg gctggtctcg ggccacgcct attccaaggg gctacggacg gtgaagactt
     1561 gcgtgggcag cgaattctgc cgctttggca cacaggattc gaccgggctg gggatccggc
     1621 tggaaaagct gctatggggg tcctggacac cgcacaaatt cgtgttgatg gtcatttgct
     1681 atctcgtcaa acagaacagc
//
LOCUS       DTVW01000023            1616 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1049735, whole
            genome shotgun sequence.
ACCESSION   DTVW01000023 DTVW01000000
VERSION     DTVW01000023.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1616)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1616)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1616
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1049735"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..334)
                     /locus_tag="EYO87_00255"
     CDS             complement(<1..334)
                     /locus_tag="EYO87_00255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009806714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase"
                     /protein_id="HIC64434.1"
                     /translation="MASQITTINPATEETLNTYALMTNDEVKDAVRGCHEAFLEWRQR
                     PIEERAETIRAIGNELANSKEDFAQLMTREVGKLIGDSRDEIDLCAQICQFTADNGRV
                     QPFFLGEGH"
     gene            738..1010
                     /locus_tag="EYO87_00260"
     CDS             738..1010
                     /locus_tag="EYO87_00260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010971229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal/formaldehyde-sensitive transcriptional
                     repressor"
                     /protein_id="HIC64435.1"
                     /translation="MSHTTENKSKLIARVRRLKGQMEAIERALEAEASCAEILNLAAS
                     VRGATNGLVVELLEDHLRNHIVDAENEAQRAAGAAEFTEVMRRHLR"
     gene            1007..>1616
                     /locus_tag="EYO87_00265"
     CDS             1007..>1616
                     /locus_tag="EYO87_00265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_386102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HIC64436.1"
                     /translation="MSRDFAPVVPHDHVFLGENHARNERRTWAVIALTATMMVAEITA
                     GTIFGSMALLADGWHMSTHASALLITALAYLYARRNARNPRFTFGTGKLGDLAAFGSA
                     TVLAIVALLIGWESLVRLRSPVPISFDEAILVAALGLVINLVSAWLLKDDPDHHHGHG
                     HHHHDDHHHAQTHKDGHHSANATGVEHRDNNLRAAYLHVLADA"
BASE COUNT          296 a          505 c          501 g          314 t
ORIGIN      
        1 cgtgcccctc gccaaggaag aagggctgga cccggccgtt atcggcggtg aactggcaga
       61 tctgggcgca gaggtcgatc tcgtcgcggc tgtcgccgat cagcttgccg acctcgcggg
      121 tcatgagctg ggcaaagtct tccttgctgt tcgcgagttc gttgccgatc gcgcggatgg
      181 tctcggcccg ctcttcgatc gggcgctgcc gccattcgag aaaagcctcg tggcatccgc
      241 gcacggcgtc cttcacctcg tcattggtca tgagggcgta ggtgttcagc gtttcctctg
      301 tcgcgggatt gatggtggtg atctggctgg ccatggatat ctccgtgctg tccggaagcg
      361 tttctgggcg ggcaacgcga tcgtcgtgct cgatgttcct tgcgtgcaat catatcttga
      421 cgatccttcc tggtgacatc gtcgttccgg atcggtccga ttggcgaatg cacaggctga
      481 tccgaccccg atgacgcgga tctgcgaaga catcgcggac aatcggtgag ttgcgcggca
      541 tggcgacgcg ccccggattg gccgggcaag cgaccgtgcg acgaaagggc cagccgctat
      601 ggcgacaagg atcgtccgtg ccgcctgcgc tggccggttc cggcaacgac gaacgatcaa
      661 tcgtgcggtg cgtggcggca tcctggtcgg caagatcaac ttgcgcccgc cccgaatata
      721 gggtagcacc ctttcctatg tcacacacca ccgagaacaa atcgaagctc attgcaaggg
      781 tccgccggct gaagggtcag atggaagcga tcgagcgtgc gctggaagcc gaagcctcct
      841 gtgccgaaat tctgaacctc gccgcgtcgg tgcgcggagc caccaacggt ctcgtcgtcg
      901 aactgctcga ggatcatctg cgcaaccata tcgtcgatgc ggaaaacgag gcgcaacgtg
      961 ccgccggggc ggcggaattc accgaagtca tgagaaggca tctcagatga gccgcgattt
     1021 cgcacccgtc gttccgcacg accacgtatt ccttggcgaa aaccatgccc gcaacgaacg
     1081 ccggacctgg gccgtcatcg cgctgacagc gacgatgatg gttgccgaaa tcaccgccgg
     1141 gacgatcttt ggatcgatgg cgttgctggc tgacggctgg cacatgtcca cgcatgcctc
     1201 ggcgctgctg atcacggcgc tggcctatct ctatgcccga agaaatgcgc gcaacccgcg
     1261 ctttaccttc ggcaccggca agcttggcga tctggccgcg ttcggcagcg cgaccgttct
     1321 ggccatcgtc gctttgctga tcggctggga aagccttgtc cggctgcgca gcccggttcc
     1381 gatcagtttc gacgaggcga tcctggtggc ggcgttgggc cttgtcatca acctggtcag
     1441 cgcctggttg ctcaaggatg atcccgacca tcatcatggg cacggacatc accaccatga
     1501 tgaccaccac catgcgcaaa cccacaagga cggacatcac agcgcaaatg cgaccggcgt
     1561 ggaacatcgc gacaacaacc tgcgcgcggc ctatctgcat gtcctcgccg atgccc
//
LOCUS       DTVW01000024            1188 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1050799, whole
            genome shotgun sequence.
ACCESSION   DTVW01000024 DTVW01000000
VERSION     DTVW01000024.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1188)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1188)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1188
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1050799"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..310)
                     /locus_tag="EYO87_00270"
     CDS             complement(<1..310)
                     /locus_tag="EYO87_00270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007799721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate/glutamate racemase family protein"
                     /protein_id="HIC64437.1"
                     /translation="MSDPIRPFGAPGTHLATGGKAIYGAPLGILMLEARFPRVYGEMG
                     NALTWPFPVMYRIVRGATPDRVVCDAARGLLDDFIAAARDLVDLGAEGITTNCGFLSI
                     F"
     gene            complement(502..>1188)
                     /locus_tag="EYO87_00275"
     CDS             complement(502..>1188)
                     /locus_tag="EYO87_00275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020041226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HIC64438.1"
                     /translation="AQLDRRGQGGATFGGAAAVADIKRRKFAIFDRIAAEDARPIRPE
                     RVIAALMKVLAPDATVVSDPGTSCPYASAYYRQSLAGRRFITNRAHGALGYALSASLG
                     AWFGRPSGKTVALMGDGSFGFTCGELETVCRSRAPITFVVFSNASYGWIKASQKDDKG
                     GRYYNVDFSGVDQAAVAAAYGVKSWRVEDPADLESVLAKAVAHDGPTLVDVVVQPLEE
                     SNAPVRRWMG"
BASE COUNT          209 a          423 c          378 g          178 t
ORIGIN      
        1 gaaagatcga aaggaagccg caattcgtcg tgatgccctc ggcgccaaga tcgacaagat
       61 cgcgggcggc agcgatgaag tcgtccagaa gaccacgggc tgcgtcgcag accacgcggt
      121 ccggggtggc gccccgcacg atccggtaca tcaccgggaa cggccaggtc agggcgttgc
      181 ccatctctcc gtagacgcgc ggaaaacgcg cctccagcat caggatgcca aggggcgcgc
      241 catagatggc cttgccgccc gtcgcgagat gggttccggg cgcgccgaac ggtcggatcg
      301 ggtcggacat cagcgaaatc cctttgcgcc gaagaatgca ggatcgtcgc ccgcaaccag
      361 ccgggtcgca agccctcgcc tgcgcgcccg gcccagaggc cggtcagcgg ccgccgtgac
      421 atcagccttc atcccgtcct cctttcgctc agcccccgcc gatcgcgcga tgttgccgtc
      481 tcggcccggt cggccagacc ctcatcccat ccaccggcgc accggcgcgt tcgattcctc
      541 cagcggctgc acgaccacat cgacaagcgt cggaccgtca tgcgccaccg ctttggccag
      601 cacggattcc agatcggcgg ggtcttccac ccgccaggat ttcaccccat aggcggcggc
      661 caccgcggcc tgatccacgc cgctgaaatc gacgttgtag tagcggccgc ccttgtcatc
      721 cttctggctt gccttgatcc agccgtagct tgcgttggaa aagacgacga aggtgatggg
      781 cgcgcgcgac cggcagaccg tctccagttc gccgcaggtg aatccgaacg acccgtcccc
      841 catcagcgcg accgtcttgc ccgatggccg gccgaaccac gcgcccagcg atgccgacag
      901 cgcatagcca agcgcgccat gcgcgcggtt ggtgatgaaa cggcgacccg ccagcgattg
      961 tcggtaatag gccgatgcat agggacacga cgttccggga tccgagacga ccgtcgcatc
     1021 cggggcaagc accttcatca gggcggcgat cacgcgctcg gggcggatcg gtcgggcgtc
     1081 ctcggcggcg atcctgtcaa agatcgcgaa tttgcggcgc ttgatgtcgg ccacggccgc
     1141 cgcaccgcca aaggtcgcgc cgccctgccc gcggcggtca agctgggc
//
LOCUS       DTVW01000025            2083 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1053907, whole
            genome shotgun sequence.
ACCESSION   DTVW01000025 DTVW01000000
VERSION     DTVW01000025.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2083)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2083)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2083
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1053907"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..924
                     /locus_tag="EYO87_00280"
     CDS             <1..924
                     /locus_tag="EYO87_00280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007205276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C4-dicarboxylate ABC transporter permease"
                     /protein_id="HIC64439.1"
                     /translation="VMIGMFGVSEALAQLHHVDKTAVKQTISRIVPTWSSILKYLPLS
                     LQTSSIGVIIGALPGTGGDIAALMAYDHAKRVTKNPEVPFGQGAREGLVAPETANNAA
                     VGGAFIPMLTLGIPGDAVTAIMIGALYIHGLNPGPMLMIDQPQMFWFITGALVLANIF
                     MLIFGLTGIRIFTRIVEMPRTVLLPLILLLSIVGAYAVNNAITDVYWMLAFGVLGYFM
                     KSYGYQLGPVILGVILSRLLDENWRRAIISEQGSVAGLFRGIATSPLSLVLAAMVVMI
                     FVSQTPVWRRFRRKIGLERIEHDQDAPGSGA"
     gene            936..>2083
                     /locus_tag="EYO87_00285"
     CDS             936..>2083
                     /locus_tag="EYO87_00285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013653242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate isomerase/epimerase and
                     4-hydroxyphenylpyruvate domain-containing protein"
                     /protein_id="HIC64440.1"
                     /translation="MKTGIATVSIAGNLREKLAAIAAAGFDGLEIFEQDFLQDAANPR
                     EVGRMIRDHGLEVMLYQPFRDFEGLPATLRARAFDRARHKFDLMAELGAELMLICSSV
                     HPQAMGGIDRAADDLAELAEIATRRGLRIGYEALAWGRHVNDHRDAWEIVRRADHPAL
                     GLILDSFHTLGRRIDPDTIRRIPGDRIFFVQLADAPMIDMDLLYWSRHFRTMPGEGDL
                     PVVDFMRAVTATGYGGPLSLEIFNDQFRGGSPEGIARDGHRSLIWLMDQVRRAEPALH
                     VDLPPIPENLGVEGVEFIEFASDAAEAPALEAALTRMGFHREGVHRNKRVTVWRQGGI
                     RIVVNTEETGFAHSFFLNHGTGVCDIGLRVEDAQATVVRAAALDARLF"
BASE COUNT          336 a          671 c          691 g          385 t
ORIGIN      
        1 gtgatgatcg gcatgttcgg cgtcagcgag gcgctggcgc agttgcacca tgtcgacaag
       61 accgcggtga agcagaccat cagccgcatc gtgccgacct ggtcctcgat cctgaaatac
      121 ctgccgctgt cgctgcaaac ctcgtccatc ggcgtgatca tcggcgcctt gcccggcacc
      181 ggcggagaca tcgcggcgct gatggcctat gaccacgcca agcgcgtgac caagaacccc
      241 gaagtgccct tcggccaagg cgcgcgcgag ggtctggtcg cccccgagac cgccaacaac
      301 gcggccgtcg gcggtgcctt catcccgatg ctgacgctgg gcattccggg cgatgcggtg
      361 accgcgatca tgatcggggc gctgtatatc cacggcctca atcccggccc gatgctgatg
      421 atcgatcagc cgcagatgtt ctggttcatc accggcgcgc tggtgctggc caacatcttc
      481 atgctgatct tcgggctgac cggcatccgc atctttacca ggatcgtgga aatgccgcgc
      541 accgtgctgc tgccgctgat cctgcttttg tccatcgtcg gtgcctatgc ggtcaacaac
      601 gcgatcaccg atgtctactg gatgctggcc ttcggggtgc tgggctattt catgaaatcc
      661 tatggctacc agcttggccc cgtgatcctg ggcgtgatcc tgtcgcggct gctggacgag
      721 aactggcgcc gggcgatcat ttccgaacag ggcagcgtcg cgggcctgtt caggggcatc
      781 gcgaccagcc cgctgtcgct ggttctggcg gcgatggtgg tgatgatctt cgtcagccag
      841 accccggtct ggcgcaggtt tcgccgcaag atcggtctgg aaaggatcga acacgaccag
      901 gacgcccccg gctcgggcgc gtagggaggc tgggaatgaa aacgggcatt gcgacggttt
      961 cgatcgcggg caacctgcgc gaaaagctgg ccgccatcgc ggcggccggc ttcgacgggc
     1021 tggagatttt cgaacaggat ttcctgcagg atgcggccaa cccgcgcgag gtcggccgga
     1081 tgatccgcga tcacgggctg gaggtgatgc tgtatcagcc tttccgcgat ttcgaggggc
     1141 ttcccgccac gctgcgcgcc cgcgccttcg atcgtgcccg gcacaagttc gacctgatgg
     1201 cggaactggg cgccgagctg atgctgatct gttcctcggt ccatccgcag gcgatgggcg
     1261 ggatcgaccg cgccgccgat gatctggccg aactggccga gatcgccacc cggcggggcc
     1321 tgcggatcgg ctacgaggcg ctggcctggg gccgtcacgt caacgaccac cgcgacgcct
     1381 gggaaatcgt gcgccgggcc gatcatccgg cactgggcct gatcctggac agctttcaca
     1441 cgctgggccg caggatcgac ccggacacga tccgccgcat tccgggcgac cggatctttt
     1501 tcgtccagct tgccgatgcg ccgatgatcg acatggacct gctgtattgg tcgcgccatt
     1561 tccgcaccat gccgggcgag ggcgatctgc cggtggtgga tttcatgcgt gccgtgacgg
     1621 cgaccggcta tggcgggccg ctgtcgctgg aaatcttcaa tgaccagttc cgcggcggca
     1681 gccccgaagg catcgcgcgc gacggccatc gttcgctgat ctggctgatg gatcaggtcc
     1741 gccgcgccga accggcgctg catgtcgatc tgccgccgat cccggaaaac ctcggcgtcg
     1801 agggcgtcga gttcatcgaa tttgcctcgg acgcggcaga ggccccggcg ctggaagcgg
     1861 cgctgacacg gatgggcttt caccgcgaag gcgtgcatcg caacaagcgc gtcaccgtct
     1921 ggcggcaggg cggcatccgc atcgtcgtga ataccgagga aaccggcttt gcgcacagtt
     1981 ttttcctgaa ccacggcact ggcgtctgcg atatcgggct gcgggtcgag gatgcgcagg
     2041 ccaccgtcgt ccgcgccgcg gcgctggacg ccagactgtt cca
//
LOCUS       DTVW01000026            4109 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1056132, whole
            genome shotgun sequence.
ACCESSION   DTVW01000026 DTVW01000000
VERSION     DTVW01000026.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 4109)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4109)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4109
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1056132"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..191)
                     /locus_tag="EYO87_00290"
     CDS             complement(<1..191)
                     /locus_tag="EYO87_00290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64441.1"
                     /translation="MKMTTGIYAALFALAAVGAQASQHSAGASDTVTPGDQQMDGMAG
                     QDGMSRDGADKIPWAGGRRP"
     gene            400..1683
                     /locus_tag="EYO87_00295"
     CDS             400..1683
                     /locus_tag="EYO87_00295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005613350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HIC64442.1"
                     /translation="MPRIPSDGQLDSTLALLANPYFFIAERCRRLETDLFETRILLGR
                     TICMTGPAAAELFYRNEQLVRKDAMPARIQKTLLGEGGVQGLDGEAHRHRKRMFMSLM
                     TSARIGALRDRMRQLLDARANDWEGMDRVVLYDETREILAKAVCAWAGVPLPPADVAR
                     RTRQLTGLFQNAGSVGPRHWRARLSRHRLQRWASRMVGQVRDGSLEPQEESALHVIAT
                     WRDPDGALLRPAVAAVELLNVLRPTVAVSVFMTSAAHALHEHGDWQHKLREDQGNLEP
                     FVQEVRRFYPFFPAVAAWSTKDFRWRDYHFPQGRRILLDLTGTNSDPRTWDAPGEFRP
                     DRFQHWNGNAFTFIPQGGGSHDTGHRCPGEWIAIELMKAFCDFLVGSITYDLPDQDLS
                     IDLSSLPALPKSRVVISRIRRRTSLRHDRIEVPAD"
     gene            complement(1695..3446)
                     /gene="sulP"
                     /locus_tag="EYO87_00300"
     CDS             complement(1695..3446)
                     /gene="sulP"
                     /locus_tag="EYO87_00300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018701365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate permease"
                     /protein_id="HIC64443.1"
                     /translation="MPRLTLYLPVLDWGSRYDRDKLSGDLVAAVIVTIMLIPQSLAYA
                     LLAGLPPEAGIYASILPIVLYAIFGTSRTLAVGPVAVVSLMTAAAIGKLGDQGIDQVT
                     AALTLAFLSGIFLLILGLFRLGFLANFLSHPVIAGFVTASGILIATSQLKYILGVRAS
                     GDTLIEMLHGLWSAIGTINGITVLLGASATAFLFWVRKGLKPLLLRIGLGNTLADMGS
                     KAGPVLAVLVTTLVVWAFGLADRGVDIVGTVPRALPPLTVPAFQPGLLAAMIGPAILI
                     SVIGFVESISVAQTLAARRRQRIDPDQELIGLGAANLGAAFTGGFPVTGGFSRSVVNF
                     DAGARTPAAGAYTAVGLAIAALMLTPAIYYLPKATLAATIIVAVLGLVDLSILKRSWV
                     YSRADFAAVTATILLTLGLGVEIGVSAGVLISILIHLYKSSRPHMAVVGQVPGTEHYR
                     NVNRHDVTLHDAILSVRVDESLYFANARNLEDRIYDMVAEREDLRHVILMCSAVNEID
                     MSALESLEAINRRLESRGITFHLSEVKGPVMDRLKKSHFLDDLTGRVFLTQHRAVQTL
                     CSDAPGPSHPSNDGVSL"
     gene            complement(3452..3841)
                     /locus_tag="EYO87_00305"
     CDS             complement(3452..3841)
                     /locus_tag="EYO87_00305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012330130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase"
                     /protein_id="HIC64444.1"
                     /translation="MMTKSMKDLVAEARTRVETISPADAQAARPNGDVILDVREPAEL
                     DSDGAIAGAIHIPRGLLEAQADPDTGKAHDALVAMRRSKGHVNVLCASGARAALAADV
                     LKTMGYNARVIEGGLGGWKQAGLPITA"
     gene            complement(3850..>4109)
                     /locus_tag="EYO87_00310"
     CDS             complement(3850..>4109)
                     /locus_tag="EYO87_00310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007117610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HIC64445.1"
                     /translation="GHDYGADGRDEPEWEATVDKHRADNIHVKEGTAKEDYIATREER
                     DATLSLPDRMLAVLQINLRGGRLPEAESDGAHYLKLPVDKF"
BASE COUNT          735 a         1334 c         1305 g          735 t
ORIGIN      
        1 ggacgccgtc cacctgccca tgggatcttg tccgcgccat ccctggacat gccgtcctgg
       61 cctgccatgc cgtccatctg ctgatcgccc ggcgtcaccg tgtcggaagc gccggcactg
      121 tgctggctgg cctgcgcgcc gactgcggcg agggcgaaaa gcgcggcgta tatcccggtt
      181 gtcattttca tcgtgtggat cctctttctt cggaaacgtc tgcccttcaa cgaaccgcaa
      241 ccgatccggt tcttcgcaaa agcggatcgg gcggtcatag atccgtgaac cgcaccggca
      301 tttccgcgtt tcgacaaggg cgcaccggtc cagggccggc cggccatgtc tcgcgcaggg
      361 aaaagcctgc gaagcaaccg gatcagagga gggcgaccaa tgccacgaat cccgtccgac
      421 ggccaacttg acagcaccct tgcgctgttg gcgaaccctt actttttcat cgcggaaaga
      481 tgtcgcaggc ttgaaaccga tcttttcgag acccgcatcc tgctgggcag aacgatctgc
      541 atgaccggcc cggccgcggc cgagctgttc taccggaacg aacaactcgt gcggaaagac
      601 gccatgcctg cacggatcca gaaaaccctt ctgggcgaag gcggtgtcca gggactggat
      661 ggcgaagcac atcggcacag gaagcggatg ttcatgtctc tcatgacatc cgcacggata
      721 ggcgcgcttc gcgacaggat gcggcaactt ctggacgccc gtgcgaatga ctgggaggga
      781 atggacaggg ttgttctcta tgacgagacc agagaaatcc ttgcaaaagc ggtctgtgca
      841 tgggccgggg ttccgttgcc gccggcggat gtcgcgcgac ggacccggca actgaccggg
      901 cttttccaga atgccggttc ggtcgggccg aggcactggc gggcgcgcct gtccaggcat
      961 cgccttcaac gctgggcctc gcggatggtc ggacaggtgc gcgacggcag ccttgagccg
     1021 caagaggaaa gcgccctcca cgtcatcgcg acatggcgcg accccgacgg cgccttgctg
     1081 cgccctgccg tggccgcggt ggaattgctg aatgtgctgc gtccgaccgt ggcggtctcg
     1141 gtgttcatga ccagcgccgc gcacgcgtta catgaacatg gcgactggca gcacaaactt
     1201 cgcgaggacc agggcaatct ggagccgttc gtgcaggaag ttcggcgctt ctaccccttt
     1261 tttcctgccg tcgcggcttg gtccacaaag gatttccggt ggcgcgatta tcattttccc
     1321 caggggcgca ggatattgct tgaccttacc gggacgaatt ccgacccccg aacatgggac
     1381 gcgcccggtg aattccgccc ggatcgcttt cagcattgga acggcaatgc cttcacgttc
     1441 attccgcagg gcggcggcag ccatgatacc ggtcaccgct gcccgggcga atggatcgcg
     1501 atcgagctga tgaaggcgtt ttgcgatttc cttgtcggtt cgatcaccta cgacctgccc
     1561 gaccaggatt tgtcgatcga cctgtcaagc ctgcccgcct tgccgaagag ccgcgtcgtg
     1621 ataagccgca tcagacggcg gacatctctg cgccacgacc ggatcgaagt tcccgctgat
     1681 tgaggaccgc cgcttcacag cgatactccg tcattggacg gatgggacgg gccgggggcg
     1741 tcgctgcata gcgtttgcac ggcgcggtgc tgtgtcagga agacccggcc cgtcagatca
     1801 tccagaaaat gggatttctt gagcctgtcc atgaccgggc ccttcacttc gctgaggtgg
     1861 aacgtgatcc cgcgcgattc cagccgcctg ttgattgcct cgaggctttc cagcgcactc
     1921 atgtcgatct cgtttaccgc cgagcacatc aggatcacgt gccgcaggtc ttcccgctcg
     1981 gcgaccatgt catagatgcg gtcttcgaga ttgcgggcat tggcgaaata caggctttca
     2041 tcgacgcgca ccgacaggat ggcgtcatgc agggtcacgt catggcggtt gacgtttcga
     2101 tagtgttcgg tgccgggcac ctggcctacc accgccatat gcgggcgcga ggatttgtag
     2161 aggtggatga ggatcgagat cagaaccccc gccgaaacgc cgatttccac ccccagaccc
     2221 agcgtcagca ggatcgttgc ggtcacggcg gcgaaatcgg ccctggaata gacccagctg
     2281 cgtttcagga tcgagagatc gacaaggcca agcaccgcga cgatgatcgt cgccgccagc
     2341 gtggccttgg gcagataata gattgccggg gtcagcatca gcgcggcgat ggccagcccc
     2401 accgcggtat aggctccggc ggccggggtg cgggcgccag cgtcgaagtt caccaccgac
     2461 cgcgagaacc cgccggtgac cggaaaaccg cccgtgaacg cagcaccaag gttggcggcc
     2521 cccagaccga tcagctcctg atccgggtcg atgcgctggc ggcgcctggc ggccagcgtc
     2581 tgcgcgaccg agatcgattc tacgaagccg atgaccgaga tcaggatggc cggcccgatc
     2641 atcgcggcca gaaggccggg ctggaatgcc ggtaccgtca gcggcggcag cgcccggggc
     2701 acggtcccga cgatatcgac gccgcgatcc gcgaggccga aggcccagac caccagcgtc
     2761 gtgaccagaa cggccaggac cggcccggcc ttggacccca tgtcggcaag cgtgttgccc
     2821 agcccgatgc gcagcagcag cggcttcagc cccttgcgta cccagaacag gaacgccgtc
     2881 gcactcgccc ccagcaggac cgtgatcccg ttgatcgtcc cgatggccga ccacagcccg
     2941 tgcagcatct cgatcagcgt atcgccagag gccctgacgc cgaggatgta tttcaactgg
     3001 ctggtggcga tcaggatgcc gctggcggtg acgaacccgg cgatgaccgg atgcgacagg
     3061 aaattcgcca gaaatcccag ccggaacagg ccgaggatca gcaggaagat gcccgacaga
     3121 aacgccagcg tgagggcggc ggtgacctgg tcgatgccct ggtcacccag tttgccgatc
     3181 gccgccgccg tcatcagcga caccaccgcc accggtccga ccgccagcgt gcgcgaggtg
     3241 ccgaagatcg cgtagagcac gatgggcagg atcgaggcat agatcccggc ctcgggcggc
     3301 aatccggcca gcagcgcata ggccagcgac tgcgggatca gcatgatcgt gacgatcacc
     3361 gccgcgacca gatcgccgct cagcttgtcg cggtcgtaac ggctgcccca gtccagaacc
     3421 ggcaggtata gggtcaggcg gggcacgtct ttcaggccgt gatgggcagt ccggcctgct
     3481 tccagccgcc cagtccgcct tcgatgaccc tggcattgta gcccatcgtc ttcaacacgt
     3541 cggccgccag cgccgcgcgt gcccccgagg cgcaaaggac attcacatgg cctttggatc
     3601 ggcgcatcgc caccagcgcg tcatgcgcct tgccggtatc aggatcggcc tgtgcctcca
     3661 gcagcccgcg cgggatgtgg atcgcccccg cgatcgctcc gtcgctgtcc agttcggccg
     3721 gttcgcgcac gtcgaggatc acgtccccgt tcggccgtgc ggcctgcgca tcggcggggc
     3781 tgatcgtttc gacgcgggtc ctggcctcgg ccaccaggtc tttcatggat ttggtcatga
     3841 tcgtatcctt cagaatttgt cgacaggcag tttcaggtaa tgggcgccgt cgctttcggc
     3901 ctcgggcagc cttccgccac gcaggttgat ctgcaagacg gccagcatcc ggtcgggcag
     3961 cgacagcgtc gcatcgcgtt cttcgcgggt ggcgatgtaa tcctccttgg cggtgccctc
     4021 cttgacgtga atgttgtcgg ccctgtgctt gtccaccgtg gcctcccatt ccggctcgtc
     4081 gcggccgtcg gcgccgtagt catggccga
//
LOCUS       DTVW01000027            1049 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1057242, whole
            genome shotgun sequence.
ACCESSION   DTVW01000027 DTVW01000000
VERSION     DTVW01000027.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1049)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1049)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1049
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1057242"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..938
                     /locus_tag="EYO87_00315"
     CDS             <1..938
                     /locus_tag="EYO87_00315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase"
                     /protein_id="HIC64446.1"
                     /translation="EVTKKAEAVIGKDAIFATNTSTLPISDLAKASARPEQFIGIHFF
                     SPVDKMMLVEIIKGRATGPRAVAKALDFVRQIRKTPIVVNDARFFYANRCIIPYINEG
                     IRMVAEGVNPVLVENAAKMMGMPLGPLQLVDETSIDLGVKIAKATRAAMGDAYPDAAV
                     DEVLFRMADEGRLGRKSNAGFYAYDDTGKRQGLWDGLAARYPRADEQPGLTDVQHRLM
                     FAQTLEAVRALEDGVLEDIREGDVGAILGWGFAPWTGGPFGWLDMLGAARAVEICEDL
                     AERHGARFACPALLRDMAAKDQTFYGRFGQQKQAA"
BASE COUNT          181 a          349 c          359 g          160 t
ORIGIN      
        1 ccgaggtcac gaagaaggcc gaggccgtga tcggcaagga cgcgattttc gccaccaaca
       61 cctcgaccct gccgatcagc gatctggcga aagccagcgc ccggcccgaa cagttcatcg
      121 gcatccattt cttcagcccc gtggacaaga tgatgctggt cgagatcatc aagggccgcg
      181 ccaccggccc gcgtgccgtc gccaaggcgc tggatttcgt gcgccagatc cgcaagacgc
      241 cgatcgtcgt caacgatgcc cgcttcttct atgccaaccg ctgcatcatc ccctatatca
      301 acgagggcat ccgcatggtc gccgagggcg tgaacccggt cctggttgaa aacgccgcca
      361 agatgatggg aatgccgctg ggaccgctgc aactggtcga tgagacctcg atcgatctgg
      421 gcgtcaagat cgccaaggcc acccgcgccg cgatgggcga cgcctatccc gatgcggcgg
      481 tggacgaggt gctgttccgg atggccgatg agggccggct ggggcgcaag tcgaatgcgg
      541 gtttctacgc ctatgacgac acgggcaagc ggcagggcct gtgggacggt ctggcggcgc
      601 gatacccgcg cgccgatgag cagcccggcc tgaccgatgt gcagcaccgg ctgatgttcg
      661 cccagacgct ggaggccgtc cgcgcgctgg aggatggcgt gctggaggat atccgcgaag
      721 gcgatgtcgg cgcgatcctg ggctggggct tcgcgccctg gacgggcggg cccttcggct
      781 ggctcgacat gctgggtgcg gcccgcgcgg tcgagatctg cgaggatctg gccgaacgcc
      841 atggcgcgcg gttcgcctgc cccgcactgt tgcgcgacat ggccgccaag gaccagacct
      901 tctatggccg attcggccag cagaaacagg ctgcctgaac caccctgcgc cgccggcccc
      961 ggtctggacc ggcggcgcgg aatccgatgg aaattccgcc ggcgaaggcc cggtcctgca
     1021 aacgccgccg cggcgccaca cggccggga
//
LOCUS       DTVW01000028            1514 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1058612, whole
            genome shotgun sequence.
ACCESSION   DTVW01000028 DTVW01000000
VERSION     DTVW01000028.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1514)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1514)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1514
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1058612"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1098)
                     /locus_tag="EYO87_00320"
     CDS             complement(<1..1098)
                     /locus_tag="EYO87_00320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HIC64447.1"
                     /translation="MSDKDGKSTLGLGGSGRSGQVKQSFSHGRTKSVLVETKRKRVVV
                     PKTPNVQGGAGDKPKSPIVAKHAGDPSRRPAGISEAEMERRLKALAAAKAREADEAAA
                     READEKAREEERERRRAEIEAKEREDREREEALKAREEEDARRAREAEEKARRKDEPK
                     KEKAPATAAATPDQAAIEAAAARAETKGVSAGGPRKSDRDRADRGADRGDARGKGGRD
                     DNRRSGKLSLNQALSGGEGGRQRSMAAMKRKQERARQKAMGQQSRPEKVARDVQLPET
                     IVVQELANRMAERAADVVKSLMKMGMMVSMNQPLDADTAELVIEEFGHKAVRVSDSDV
                     EQVIDQVQDKAEDLQPRPPIITIMGHVDHGKT"
     gene            complement(1107..>1514)
                     /locus_tag="EYO87_00325"
     CDS             complement(1107..>1514)
                     /locus_tag="EYO87_00325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64448.1"
                     /translation="SRGARARVGAPDGLADLVEAGLARRVVDLISLTRKSGRAVAGFE
                     KVKGWLAEGRAKVLLQASDGSERGKGKLWTPTGGRWFGCLTASELGLSFGRDHVIHGA
                     LAAGGLTDKVILEAGRLTGLRGHDGGNSAVGKE"
BASE COUNT          175 a          562 c          470 g          307 t
ORIGIN      
        1 ggtcttgccg tggtccacat ggcccatgat cgtgatgatc ggcgggcgcg gttgcagatc
       61 ctcggccttg tcctgaacct ggtcgatgac ctgttcgaca tcggaatcgc tgacgcggac
      121 ggccttgtgc ccgaattcct cgatcaccag ttcggcggta tcggcgtcca gcggctgatt
      181 catggacacc atcatgccca tcttcatcaa cgacttgacc acatcggcgg cgcgttcggc
      241 catgcggttg gccagttcct gcaccacgat ggtttccggc aactgcacgt cgcgcgccac
      301 cttttcgggg cgggattgct ggcccatcgc cttctggcgg gcgcgttcct gcttgcgctt
      361 catcgccgcc atggatcgct ggcggccacc ttcgccaccg ctcagcgcct ggttcagcga
      421 caacttgccc gagcggcggt tgtcgtcgcg accgcccttt ccgcgcgcgt cgccgcgatc
      481 agcgccgcgg tcggcgcggt cgcggtcgga tttgcgcggt ccgccggccg acacgccctt
      541 ggtctcggcg cgtgcggcgg cggcctcgat ggcagcctga tcgggcgtag cggcggcggt
      601 tgccggggcc ttttccttct tcggttcgtc cttgcgcctg gccttttcct cggcttcgcg
      661 ggcgcggcgg gcatcctctt cttccctggc cttcagggct tcctcgcgtt cgcgatcctc
      721 acgctccttg gcctcgattt cggcgcggcg gcgttcgcgt tcctcctcgc gggccttttc
      781 gtcggcctct cgggcggcgg cctcgtcggc ctcgcgcgcc ttggcggcgg caagggcctt
      841 caggcggcgc tccatctcgg cttccgagat cccggcaggg cgtctggacg gatcaccggc
      901 atgtttcgcg acgatgggcg atttcggctt gtcgccagcg ccgccctgca cgttgggggt
      961 ctttggcacc acgacacgct tgcgcttggt ttccaccagc acgctcttgg tgcggccatg
     1021 gctgaaactc tgcttgacct gacccgagcg gccgctgccg cccagcccga gggtcgattt
     1081 tccgtctttg tcgctcatct gcgtcttcat tccttcccga cggccgaatt gccgccgtca
     1141 tgcccgcgca gacccgtcag tctgccggct tccaagatca ccttgtccgt caggccaccc
     1201 gccgcaagcg cgccgtgtat gacatgatcg cgcccgaagg acaaacccaa ttctgatgcg
     1261 gtcaggcagc cgaaccagcg cccgccggtc ggcgtccaca gcttgccctt gccgcgctcc
     1321 gagccgtcgc tggcctgaag cagaaccttg gcccgcccct cggccagcca gcccttgacc
     1381 ttctcgaacc cggccaccgc acgacccgat ttgcgggtca gcgaaatcag gtccacgacg
     1441 cgccgcgcca gaccggcctc gaccaggtcc gccaggccgt ccggcgcccc gacccgggcc
     1501 ctggcgccgc gcga
//
LOCUS       DTVW01000029            4251 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1059313, whole
            genome shotgun sequence.
ACCESSION   DTVW01000029 DTVW01000000
VERSION     DTVW01000029.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 4251)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4251)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4251
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1059313"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..761
                     /gene="tgt"
                     /locus_tag="EYO87_00330"
     CDS             <1..761
                     /gene="tgt"
                     /locus_tag="EYO87_00330"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HIC64449.1"
                     /translation="HLTPERSMEIQRLLGSDIVMAFDECPALPAAERDVAVSMRLSMR
                     WARRSRDAFGDRPGHALFGIMQGGVTRDLREESAQALTGIGFDGYAIGGLAVGEGQQA
                     MFGVLDYAPGFLPADKPRYLMGVGKPDDIVGAVSRGIDMMDCVLPSRSGRTGQAWTRR
                     GQVNIKNARHQDDPRPLDQDCICPACRNYSRAYLHHVFRAGEMISGMLLTWHNLHYYQ
                     DLMAGLRAAITQSRLSDFVADFHARRAEGDIPPR"
     gene            901..2070
                     /gene="rnd"
                     /locus_tag="EYO87_00335"
     CDS             901..2070
                     /gene="rnd"
                     /locus_tag="EYO87_00335"
                     /EC_number="3.1.13.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease D"
                     /protein_id="HIC64450.1"
                     /translation="MTTITRTEDLARFCETAKTAPYVTVDTEFLRERTYWSRLCLIQL
                     AIPPASTDAETGGEAVLVDPLAEGLSLDPLYELFRHEATVKVFHAARQDLEIFFHDAA
                     LFPVPLFDTQVAAMVCGFGEQVGYETLVRKIARANLDKSSRFTDWSRRPLSDAQKSYA
                     LADVTHLRVIYEFLSAELKKNGRESWLAEEIGVLEDPETYINRPEEAWLKIRTRTNSP
                     RFLAILRELARFRENYAQDRDVPRSRVFKDDAMIELASTRPATEADLGKSRLLLREAR
                     RGDIAAGILAAVKAGQESGDLPKPKGVEPGRPGNPALSDLLRVLLKAKADAAGVAPRL
                     IASAADLDAIATGERDLPALHGWRAEVFGRDALRLATGEIALSAGGGVVRVVPAR"
     gene            2070..3053
                     /locus_tag="EYO87_00340"
     CDS             2070..3053
                     /locus_tag="EYO87_00340"
                     /inference="COORDINATES: protein motif:HMM:PF13302.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HIC64451.1"
                     /translation="MAAPVTLTRPWPEDADTIVAALSDWQVTQWLSVVPWPYAMTDAQ
                     AFIAEAGPDEHAVRQGDRLVGMIRAGQSFGIWIAPGAQGQGIGLRAAVLALSRRFNEG
                     AEMVESYHLAGNRRSAGLLARLGFRPVGQEMRWSRPHGREMAAVKLRLARDDFAARHG
                     IALATARLLIDAPRPADLPALHQIVTTPQIARMLLLFHPGMSVEDIAPIFGDQSLTLP
                     MRLVARSGGRVVGSVGIGAGEKPRIYYFLAPDQVGQGLGQEMVGAFLDEIRARFDPAE
                     LLADVFLDNQPSRLLLKNLGFQRGEDGPLASLGRDSVDEGTVYNWRRRPAS"
     gene            3190..3480
                     /locus_tag="EYO87_00345"
     CDS             3190..3480
                     /locus_tag="EYO87_00345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64452.1"
                     /translation="MLEFREEAINPAGVADEGRRHGSARAGSHDGPRADICEAVAQPV
                     SAIGGIRQQCPAGPDGDMLLLFSQTCINNPETALVVYDRDPSCLIPRFDGAI"
     gene            3633..3857
                     /locus_tag="EYO87_00350"
     CDS             3633..3857
                     /locus_tag="EYO87_00350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64453.1"
                     /translation="MSELAAEFSVHPTMIHQWKRLLLEGAAGIFERAGKAVAAAEVSE
                     ETVRDLHAKIGELAVANDFLSKKLKPRIGK"
     gene            3866..>4251
                     /locus_tag="EYO87_00355"
     CDS             3866..>4251
                     /locus_tag="EYO87_00355"
                     /inference="COORDINATES: protein motif:HMM:PF13276.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HIC64454.1"
                     /translation="MIERSHPKLSVGAQCRLLSISRSSFYYAPQGEAATNLDLMLLID
                     KQFLETPFYGVRQMTWHLQNEGNAVNQKRIRRLMRLMRLMPIYQKPDTSKPAKGHRTY
                     PICSAGCGWSGPTRSGAPTSPISRCQG"
BASE COUNT          717 a         1347 c         1425 g          762 t
ORIGIN      
        1 atcacctgac ccccgaacgc agcatggaaa tccagcgcct tctgggcagc gacatcgtca
       61 tggcctttga cgaatgcccg gcgcttccgg cggcggaacg cgacgtcgct gtctcgatgc
      121 ggttgtcgat gcgatgggcg cggcggtcgc gcgacgcatt cggcgaccgg cccggacatg
      181 cgcttttcgg catcatgcag ggtggcgtga cccgcgatct gcgcgaggaa agcgcccagg
      241 ccctgaccgg gatcggcttt gacggctatg ccatcggcgg gcttgccgtg ggcgaaggcc
      301 agcaggcgat gttcggcgtg ctggattatg cgccgggttt tctgccggcg gacaagccac
      361 gctatctgat gggcgtcggc aaacccgatg atatcgtcgg cgccgtaagc cgcggcatcg
      421 acatgatgga ttgcgtgctg ccgtcacgct cgggccggac cgggcaggcc tggacgcggc
      481 gcggtcaggt caatatcaag aatgcccgcc atcaggatga cccgcgcccg ttggatcagg
      541 attgcatctg tccggcctgc cgcaattatt cacgcgccta cctgcaccat gtcttccgcg
      601 ccggcgagat gatcagcggg atgctgctga catggcacaa cctgcattac taccaggact
      661 tgatggccgg gttgcgcgcg gcgatcacgc agtcccggct gtcggatttc gtcgcggatt
      721 tccacgcccg acgcgccgaa ggcgacattc cgccacgttg attccgcgcg cctgccggtt
      781 gcagtctcgt ggcatgacgg ttgccgtggg cgtaaactgt ccttttcaaa tcacggcctg
      841 gggcgtattc attccggcgg cggacgaacc gcccatccga aggacctcat gagcagcacg
      901 atcacaacca tcacccggac cgaggatctc gcccgtttct gcgagaccgc aaaaaccgcg
      961 ccctacgtca ccgtcgatac cgaattcctg cgcgaacgga catactggtc cagattgtgc
     1021 ctgatccagc ttgcgattcc gccagcctcc accgatgccg agacgggcgg cgaggccgtg
     1081 ctggtcgatc cgctggccga gggattgtcg ctggacccgc tttacgagct gtttcgtcac
     1141 gaggcgacgg tcaaggtgtt ccacgccgcc cgccaggatc tggaaatctt ctttcacgac
     1201 gccgcgctgt ttccggtgcc gctgttcgac acgcaggttg ccgcgatggt ctgcggcttc
     1261 ggcgaacagg tcggctacga gacgctggtg cgcaagatcg cgcgggcgaa tctggacaag
     1321 tcctcgcgct ttaccgactg gtcgcgccga ccgttgtcgg atgcgcagaa atcctatgca
     1381 ctggccgatg tgacacattt gcgggtgatc tacgaattcc tttcggccga gctgaagaag
     1441 aacggtcgcg aaagctggct ggccgaggaa atcggcgtcc tggaagaccc ggagacctat
     1501 atcaaccgtc ccgaagaagc ctggctgaag atccgcacgc gcaccaattc gccgcgtttc
     1561 ctggcgatcc tgcgcgagct ggcgcggttt cgcgaaaact atgcgcagga ccgcgacgtg
     1621 ccccgctcgc gcgtgttcaa ggatgacgcg atgatcgaac tggcttcgac ccggccggca
     1681 accgaagccg atctgggcaa gtcgcggctg cttctgcgcg aagcgcggcg gggcgacatc
     1741 gcggccggga tcctcgccgc ggtcaaggcc gggcaagaat ccggcgatct gccgaaaccc
     1801 aagggcgtcg agccggggcg tccgggcaat ccggcgctgt cggatctgtt gcgcgtcctg
     1861 ctgaaggcca aggccgatgc ggcgggggtg gcccccaggc tgattgcatc ggcggcggat
     1921 ctggacgcca tcgccaccgg cgaacgcgat ctgcccgccc tgcatggctg gcgggccgag
     1981 gtctttggcc gcgacgccct gcggctggcc acgggcgaga tcgcgctgtc ggccgggggc
     2041 ggggtggtcc gcgtggtgcc cgcgcgctga tggccgcgcc cgttaccctg acccgtccct
     2101 ggcccgagga tgccgataca atcgtcgcgg ccctttcgga ctggcaggtg acgcaatggc
     2161 tcagcgtcgt gccctggccc tatgcgatga ccgacgcgca ggctttcatc gccgaggcgg
     2221 gccccgacga acacgccgtg cggcagggcg acaggcttgt gggcatgatc cgtgccgggc
     2281 agagcttcgg gatctggatc gcgccgggcg cgcaggggca ggggatcggg cttcgcgccg
     2341 cggtgctggc gctgtcgcgc cggttcaatg aaggggccga gatggtcgaa tcctaccatc
     2401 tcgcgggcaa tcgtcgctcg gccgggctgc ttgcgcggct gggatttcgg cccgtcggtc
     2461 aggaaatgcg ctggtcgcgg cctcatggcc gggaaatggc agccgtgaag ctgcggctgg
     2521 ctcgcgacga tttcgccgcc cgtcatggca ttgcgctggc cacggcgcgg ctgctgatcg
     2581 atgccccgcg tcccgccgat cttcccgcct tgcaccagat cgtgacgaca ccgcagatcg
     2641 cacggatgct gctgctgttt caccccggca tgagtgtcga ggacatcgcc ccgatcttcg
     2701 gcgaccagtc gctgacattg ccgatgcggc tggtcgcccg cagcggcggc agggtggtcg
     2761 gatcggtcgg aatcggcgcg ggcgaaaagc cccggatcta ttacttcctc gcccccgatc
     2821 aggtcggtca gggactggga caggaaatgg tcggcgcctt tctcgacgag atccgcgccc
     2881 gtttcgaccc ggcggaactg ctggccgatg tctttctcga taaccagccc tcgcgcctgt
     2941 tgctgaagaa tctgggcttt cagcgcggcg aggacgggcc gctggcctcg ttgggccgcg
     3001 actcggtgga tgagggcacc gtctacaact ggcgccgccg ccccgcgagc tgaggcgcat
     3061 gcgacggtgc gctgcgcggg cctggtgcac cggctcgcaa atgcgtgatc ggatgcctgt
     3121 tgcggcgcct ttggcgaggg cagggaaatc gacgtcgtgt ttctcgtatc tggtcccgat
     3181 ggccctggaa tgcttgagtt tcgagaagag gcgatcaatc cggccggtgt cgcggacgag
     3241 gggcggcggc acggatcggc gcgggctggg tctcatgacg gccctcgcgc cgatatttgc
     3301 gaggcggtcg cgcagccggt ttctgccata ggcggcatcc gccagcagtg tccggccggg
     3361 cccgacgggg acatgctgtt gcttttttca cagacctgca tcaacaaccc tgaaaccgcg
     3421 ctagtcgttt acgaccgcga tcctagctgt ttgatcccac ggtttgatgg tgcgatctga
     3481 gctatccccg gaaaatcgga cagtgacgga agctacgata tgacgtctgc cggtctccaa
     3541 gcacgagaag atcagcacat gtcgaaacgc aggaaccacg atgcagcgtt caaggcgcgt
     3601 gtggcgctgg aggccgtgaa ggggagcgca cggtgtcgga actggccgcc gaattcagcg
     3661 tgcatccgac gatgatccat caatggaagc gtttgctgct tgagggggcc gcaggcatct
     3721 tcgaacgtgc cggcaaggct gtggcggcgg ccgaggtcag cgaagaaacg gtccgcgacc
     3781 tgcacgccaa gatcggagag ctggccgtcg ccaacgattt tttgtccaaa aagctcaagc
     3841 cccggatcgg caagtgaggc gcgggatgat cgagcgctca catcccaagc tgtcagtcgg
     3901 cgcgcaatgc cgcctgctgt cgatctcgcg gtcgtcgttc tactacgcgc cgcagggtga
     3961 ggcggccacg aacctcgatc tcatgctgct gatcgacaag cagtttctag aaaccccgtt
     4021 ctacggcgtc cgccagatga catggcatct gcagaacgaa ggcaatgccg tgaaccagaa
     4081 acgcatccgc cgtctgatgc ggctcatgcg cctgatgccg atctaccaga agcccgacac
     4141 cagcaagccc gcgaagggcc acaggaccta ccctatctgc tcggcgggtt gcgggtggag
     4201 cggcccaacc aggtctggtg cgccgacatc acctatatcc cgctgccagg g
//
LOCUS       DTVW01000030            1082 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1064750, whole
            genome shotgun sequence.
ACCESSION   DTVW01000030 DTVW01000000
VERSION     DTVW01000030.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1082)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1082)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1082
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1064750"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..735)
                     /locus_tag="EYO87_00360"
     CDS             complement(<1..735)
                     /locus_tag="EYO87_00360"
                     /inference="COORDINATES: protein motif:HMM:PF00561.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HIC64455.1"
                     /translation="MRNFFAARMGRRPYIAGERLYLAMRDGSGDRLAALLTHAGQNDR
                     PLVVLLHGLTGCETSMNMARAAACHLARGYPVLRLNLRGAGPSRPTCRGDYHAGCSRD
                     LADALTSLGEHEPALVARGLLLSGVSLGANAMIKFLAEYGGEFPIRAAVSVSAPIDLA
                     LSCRSLMRRRNAPYHRWLLHRMKLDCQGSEMNGCARAALAQARTVYEFDDTYVAPRHG
                     FTGAPEYYEKSKALRYLYAVRVPTLLI"
     gene            complement(795..>1082)
                     /locus_tag="EYO87_00365"
     CDS             complement(795..>1082)
                     /locus_tag="EYO87_00365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012566548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III PLP-dependent enzyme"
                     /protein_id="HIC64456.1"
                     /translation="YHSLSEAVTGGLRYPMRLLRADRREAAPDRAFTLFGPTCDSTDV
                     LPGRTNFPDDIREGDWIEIGQLGAYSNAVSTRFNGVFPDSFVTVDSPPLLP"
BASE COUNT          219 a          356 c          341 g          166 t
ORIGIN      
        1 gatcagcaga gtcggcacgc ggaccgcgta gagataccgt aacgccttgg atttttcgta
       61 atattccggc gcgccggtaa agccatgccg gggtgcgaca taggtgtcgt cgaattcgta
      121 gaccgtccgc gcctgggcca gcgccgcccg cgcgcatccg ttcatctcgc tgccctgaca
      181 gtccagtttc atacggtgca gcaaccagcg gtgatacggc gcgttgcgcc gccgcatcag
      241 cgaccggcag gacaaggcaa ggtcgatcgg cgcggaaacc gaaaccgccg cgcggatcgg
      301 aaattcgccg ccatattcag ccaggaactt gatcatggcg ttggcgccga gcgatacccc
      361 cgataacagc aatccgcgcg cgaccaatgc cggttcgtgt tcgccgagcg acgtcagcgc
      421 atcggccaga tcgcggctgc atccggcgtg atagtcaccc cggcaggtcg gccgcgacgg
      481 cccggcgccg cgcaaattga gccgcaaaac cggatatccc cgcgcaaggt gacaggccgc
      541 cgcccgcgcc atgttcatcg acgtttcaca cccggtcagg ccgtgcagca acaccaccaa
      601 cggccggtca ttttgtcccg catgggtcaa caaagccgcc agccggtcgc cgctgccgtc
      661 gcgcatggcc aggtaaagcc gctcacccgc aatataaggc cggcgtccca tgcgggcggc
      721 aaagaagttc cgcatggtct gcaaatctcc gccccaccaa ggtgggcgcg gaaagaaggg
      781 ctgaaattcc accttcacgg caacaggggc ggcgaatcga cggtgacgaa actgtccggg
      841 aaaacgccgt tgaaccgggt cgacacagcg ttcgaatagg cgccaagctg gccgatttcg
      901 atccagtcgc cttcgcggat atcgtctgga aagttggtgc ggccgggcag aacgtcggtt
      961 gaatcgcagg tcgggccgaa cagggtgaat gcgcggtcgg gcgcggcttc ccggcggtcc
     1021 gcgcgcaaca gacgcatcgg ataccgcaac ccgccggtca ccgcctccga caggctgtga
     1081 ta
//
LOCUS       DTVW01000031            2299 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1067154, whole
            genome shotgun sequence.
ACCESSION   DTVW01000031 DTVW01000000
VERSION     DTVW01000031.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2299)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2299)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2299
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1067154"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..119)
                     /locus_tag="EYO87_00370"
     CDS             complement(<1..119)
                     /locus_tag="EYO87_00370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018001117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-hydroxyisourate hydrolase"
                     /protein_id="HIC64457.1"
                     /translation="MPGFLTTHVLDTARGAPAEGMEVALYRLTDGQRTELARLR"
     gene            complement(335..1687)
                     /locus_tag="EYO87_00375"
     CDS             complement(335..1687)
                     /locus_tag="EYO87_00375"
                     /EC_number="3.5.4.32"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008233697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="8-oxoguanine deaminase"
                     /protein_id="HIC64458.1"
                     /translation="MSPSIDRLLIRGADVVVTMDQSRSEIASGDVLIEDGRIVAVGRG
                     LPPDRARVIEAAGCVVTPGLVNTHHHLFQTLTRAVPAAQDAALFGWLKTLYPIWARMG
                     PDDIRLSAEIGLAELAMSGCTCSSDHLYMFPNGARLDDSIEAARKIGIRFTATRGAMS
                     IGESRGGLPPDALVEDEAAILRDSERVIDAFHDPAEGAMVQVALAPCSPFSVSRELMR
                     DAAILARDKAVRLHTHLAENDEDIRYSLATFGMLPGDYAESLGWTGEDVWHAHCVKLS
                     APEIDLFARTGTGVAHCPCSNARLASGIAPVRAMRDAGVAVGLGVDGSASNDCSHLGL
                     EARQAMLVARLRDGPAAMGAREVLEIATIGGARVLGRRDIGALAPGMQADLVLWDIGD
                     LPVAGHWDPVAALVFCAPVRPRAVYVQGRAIVGEHRLLSADPRELQGRAQAAVARLAG
                     "
     gene            complement(1671..>2299)
                     /locus_tag="EYO87_00380"
     CDS             complement(1671..>2299)
                     /locus_tag="EYO87_00380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011750150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="purine permease"
                     /protein_id="HIC64459.1"
                     /translation="IIILTMLLVMLVTMIESTGMFLALSDICKKPLSQKSLAAGLRAD
                     GLGTAIGGLFNTFPYTSFSQNVGLVGVTGIRSRFVCVAGGAIMIVLGLIPKMGALVES
                     LPTTVLGGAGLVMFGMVAATGVRILARVDFASNRHNLFIVAISIGVGMIPVIAPDFNQ
                     WMPKAIYPLVHSGILLAAISAVLLNWFYNGAPDIDEAELREAGHVAEH"
BASE COUNT          418 a          816 c          734 g          331 t
ORIGIN      
        1 cgaagccgcg ccagttcggt tcgctgcccg tccgtcagcc gatacagcgc cacctccatc
       61 ccctcggccg gagcgccgcg ggcggtatca agaacatggg ttgtcagaaa tcccggcatc
      121 ctcgcctccc ctgatgattg ccgcctgatt gataaccgat ccgccacgac aggcgagaca
      181 cggcagaggc aaggcagtct ttacatctgg tgcataatcg cacatgcccg gccccggaag
      241 aatgtttccc cgcagatggc caggcggttc gccacgaagg ccgcgccggc gcaaacaggc
      301 cccccgccat gtgccgcggc gaaagccggc cgcatcagcc cgcaagccgg gccacggccg
      361 cttgcgcccg gccttgcaac tcgcgcggat cggcgctcag caggcggtgt tcgccgacga
      421 tggcccggcc ctggacatag acggcccttg gcctgaccgg cgcgcagaag accagcgccg
      481 cgaccggatc ccagtggccc gccaccggca agtcgccgat atcccacagc accaggtcgg
      541 cctgcatccc cggcgccagg gcgccgatat cgcgccgccc cagcacgcgc gccccgccga
      601 tcgtggcgat ctccagcacc tcgcgcgcgc ccatcgcggc cggtccgtcg cgcaaccggg
      661 cgaccagcat tgcctgccgc gcctcaagcc ccagatggga acaatcgttg ctggccgagc
      721 catcgacgcc caggcccacg gccactcctg cgtcgcgcat ggcgcggacc ggcgcgatgc
      781 cgctggccag ccgggcgttg gaacaggggc aatgggcgac gccggtgccg gtccgcgcga
      841 acaggtcgat ctcgggggcc gacaacttga cgcaatgggc gtgccagaca tcctcgccgg
      901 tccagcccag gctttcggcg taatcgcccg gcagcatccc gaaagtcgca agcgaataac
      961 ggatatcctc gtcgttctcg gccaggtggg tgtgcagccg cacggccttg tcgcgtgcca
     1021 ggatcgctgc gtcgcgcatc aactcacggc tgaccgaaaa gggcgaacag ggcgcaagcg
     1081 cgacctgcac catcgcgcct tccgccgggt cgtgaaaggc gtcgatgacc ctttcgctgt
     1141 cgcgcaggat cgcggcctcg tcctcgacca gggcatcggg cggcagtccg ccccggcttt
     1201 cgccgatcga catggcgccg cgcgtggcgg tgaagcggat gccgatcttc cgcgcggcct
     1261 cgatgctgtc gtccagccgc gcgccgttcg gaaacatgta gagatgatcg gacgaacagg
     1321 tgcagcccga catggccagc tccgccaggc caatctcggc cgacaggcgg atgtcatccg
     1381 ggcccatccg ggcccagatc ggatacaatg tcttcagcca cccgaacagc gcggcgtcct
     1441 gtgcggcggg caccgcgcgg gtcagggtct ggaacaggtg gtggtgggtg ttgacgaggc
     1501 cgggcgtgac gacacagccc gccgcctcga tcacgcgggc acgatcgggc ggcaggcccc
     1561 ggcccaccgc cacgatcctg ccatcctcga tcaacacatc gcccgaggcg atctcggatc
     1621 gcgactgatc catggtcacg acgacgtcgg caccccggat cagcaggcgg tcaatgctcg
     1681 gcgacatggc ccgcttcgcg cagttccgcc tcgtcgatat cgggcgcgcc gttgtagaac
     1741 cagttcagca gcaccgcgct gatcgccgcc agaagaatgc cggaatggac cagcggatag
     1801 atcgccttcg gcatccactg gttgaaatcc ggggcgatca cggggatcat gccgaccccg
     1861 atcgagatgg cgacaatgaa caggttatgg cggttggatg cgaaatcgac ccgcgccaga
     1921 atcctcacgc cggtggcggc gaccatgccg aacatgacca gcccggcgcc gcccagaaca
     1981 gtggtcggca ggctttcgac cagagcgccc attttcggga tcagccccag cacgatcatg
     2041 atcgcgcctc cggccacgca gacgaagcgc gaccggatcc cggtcacgcc caccagtccg
     2101 acattctgcg agaacgaggt atagggaaag gtgttgaaca acccgccgat cgccgtgcca
     2161 aggccgtcgg cgcgcaagcc ggcggccagc gacttctggc tcagtggctt cttgcagata
     2221 tcgctcagcg ccaggaacat gccggtcgat tcgatcatcg tgaccagcat gaccagcagc
     2281 atggtcagga taatgatcg
//
LOCUS       DTVW01000032            2176 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1067375, whole
            genome shotgun sequence.
ACCESSION   DTVW01000032 DTVW01000000
VERSION     DTVW01000032.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2176)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2176)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2176
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1067375"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..593)
                     /gene="bmt"
                     /locus_tag="EYO87_00385"
     CDS             complement(<1..593)
                     /gene="bmt"
                     /locus_tag="EYO87_00385"
                     /EC_number="2.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="betaine--homocysteine S-methyltransferase"
                     /protein_id="HIC64460.1"
                     /translation="MTDPLSRLLDQNDWLLADGATGTNLFNMGLESGEPPELWNVDQP
                     DRIRALYRGAVEAGSDLFLTNSFGGNASRLKLHKAQGRVAELNRAAAELGREVADRAG
                     RAVIVAGSIGPTGEIMAPMGTLTREAAVEMFHEQAEALKDGGADVLWVETISAFEEFG
                     AAAEAARLAGMPWCGTMSFDTAGRTMMGVTSAELAASV"
     gene            complement(760..1344)
                     /locus_tag="EYO87_00390"
     CDS             complement(760..1344)
                     /locus_tag="EYO87_00390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011747228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L9"
                     /protein_id="HIC64461.1"
                     /translation="MQVILLERVAKLGQMGEVVKVKEGYARNFLLPQGKALRASDANI
                     AAFEDRKIQLEARNSETRAEAEKIAKSLDGKTFVVIRSASDAGALYGSVTTRDVADTA
                     TEAGFSIDRKQVVLGNPIKDLGLHVVNVVLHPEVTADVTLNVARSPEEAELQAQGKSI
                     QDLAAEADAEAEFEISELFDDIGGASDEDDAEDR"
     gene            complement(1357..1584)
                     /gene="rpsR"
                     /locus_tag="EYO87_00395"
     CDS             complement(1357..1584)
                     /gene="rpsR"
                     /locus_tag="EYO87_00395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009805008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S18"
                     /protein_id="HIC64462.1"
                     /translation="MANKPFFRRRKVCPFSGDNAPKIDYKDTRLLQRYISERGKIVPS
                     RITAVSAKKQRELARAIKRARFLALLPYAVK"
     gene            complement(1598..1975)
                     /locus_tag="EYO87_00400"
     CDS             complement(1598..1975)
                     /locus_tag="EYO87_00400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_353214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6"
                     /protein_id="HIC64463.1"
                     /translation="MPLYEHVLIARQDLSNTQAEGLIEHFSTVLADNGGKVVDNEYWG
                     VRTLAYKINKNRKGHYAFLRSDAPSDAVQEMERLARLHDDVMRVMTIRVDQHEEGPSI
                     QMQKREERGDRRGGDRGDRRDRN"
BASE COUNT          336 a          715 c          690 g          435 t
ORIGIN      
        1 accgaggcgg ccagctcggc cgaagtcacg cccatcatcg tacggccggc ggtgtcgaag
       61 ctcatcgtgc cgcaccaggg catcccggcc agcctcgcgg cctcggccgc ggcgccgaat
      121 tcctcgaagg cgctgatcgt ctcgacccag agaacgtccg cacccccgtc cttcagagcc
      181 tcggcctgtt cgtggaacat ctcgaccgcg gcctcgcggg tcagggttcc catgggcgcc
      241 atgatctcgc ccgtggggcc gatgctgccg gcgacgatta ccgcccggcc cgccctgtcg
      301 gccacctcgc gccccagttc ggccgctgcg cggttcagtt cggccacccg gccctgggcc
      361 ttgtgcagct tcaggcggct ggcattgccg ccgaaggaat tggtcaggaa caggtcggac
      421 ccggcctcga ccgcgccgcg atacagcgcg cggatcctgt cgggctgatc gacattccac
      481 aattccggcg gctcgcccga ttccagtccc atgttgaaca ggttggtccc ggtcgcgcca
      541 tcggccagca gccagtcgtt ttggtccaga agtcggctca gcggatcggt catttctcta
      601 acctcggtca tcggggcgaa aaccgtccgg ggacggtcac atgtcaactg gtccatgcta
      661 gaagcagatc cgcccggaca caatttccga ccgaacgaat gaaagaccgc gccggtttcc
      721 cgacgcggct tcgatctttg tgtattcgcg gaggaaagat cagcgatctt ccgcgtcgtc
      781 ttcgtccgat gcgccgccga tatcgtcgaa cagctccgag atctcgaatt cggcttcggc
      841 atcggcttcg gccgccaggt cctggatcga tttgccctgc gcctgaagct cggcctcttc
      901 gggcgagcgg gcgacgttca gggtcacgtc ggcggtgact tcggggtgca gcacgacgtt
      961 gacgacgtgc agacccagat ccttgatcgg gttgcccagc acgacctgct tgcggtcgat
     1021 gctgaaaccc gcctcggtcg cggtgtcggc cacgtcgcga gtcgtcaccg acccgtaaag
     1081 cgcgccggca tccgaagccg agcggatgac cacgaaggtc ttgccgtcca gcgacttggc
     1141 gatcttttcg gcctcggccc tggtttcgga attgcgtgct tccagttgga tcttgcgatc
     1201 ctcgaaggca gcgatgttgg cgtcggatgc gcgcagcgcc ttgccctggg gcagcaggaa
     1261 gttgcgggca taaccctctt tcaccttcac cacttcgccc atctggccca gcttggccac
     1321 gcgttccagc aggatgactt gcatgttccg gtctccttac ttcacggcat agggaagcag
     1381 ggcaagaaag cgggcgcgct tgatcgcgcg ggccagctca cgctgcttct tggccgagac
     1441 ggcggtgatg cgcgagggca cgatcttgcc gcgttcgctg atatagcgtt gcagcagacg
     1501 ggtatccttg tagtcgatct tcggcgcgtt atcgcccgag aacgggcaga ccttgcgacg
     1561 acggaagaac ggtttgttcg ccatttttct gatctcctca gttccggtcg cgacggtcgc
     1621 cgcgatcgcc gccccggcgg tcgccgcgct cttcgcgctt ctgcatctgg atcgagggac
     1681 cttcctcgtg ctggtccacg cggatggtca tcacgcgcat cacatcgtca tgcagccggg
     1741 ccagtcgctc catttcctgc acggcgtccg agggggcgtc gctgcgcagg aaggcgtaat
     1801 ggcccttgcg gttcttgttg atcttgtagg cgagggtgcg cacaccccag tattcgttgt
     1861 ccacgacctt gccgccatta tcggcgagaa cggtcgagaa atgttcgatc agcccttcgg
     1921 cctgcgtgtt cgacaggtcc tgacgggcga tcagcacatg ctcgtaaaga ggcatggcga
     1981 tcctttcggg ttcgggcgca cttcataggc gggcttcgac cttccgcgcc cgccacgaga
     2041 ggttgcgcgg attgcatgtc tcggcggaag gatgcggcct tatagccggg aatgctgcgg
     2101 atgcaaggcg attcggtgcc gcgcgtgtgg gccagtccgc cccttgccga gcccgccgcg
     2161 cgccggcatc gtggcg
//
LOCUS       DTVW01000033            1355 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1067785, whole
            genome shotgun sequence.
ACCESSION   DTVW01000033 DTVW01000000
VERSION     DTVW01000033.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1355)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1355)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1355
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1067785"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            2..940
                     /locus_tag="EYO87_00405"
     CDS             2..940
                     /locus_tag="EYO87_00405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020041647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-ribose ABC transporter substrate-binding
                     protein"
                     /protein_id="HIC64464.1"
                     /translation="MTRRLLLAAVAAAPLMAGAANAEGLITIIVNDPANPYWFTEGEV
                     ARKTAEELGYTANVAAHKGDTNTESTLIDTAITNKSEAIILDPANADGSIGAVKKAVD
                     AGIPVILVNAEINQEGLAKAQLVSNNAQGAALGAQAWVEAVGDTGQYVELFGNPADNN
                     AQTRSNGYETVLSQYPDLEKVGREVANWDRTQGYQKTQSLLQANPDIIGVISGNDEMA
                     LGAIAALKEAGKLDQVKVGGFDGSPDAVEAVKAGEMQYTVLQPVAVFSAEAVRQADNF
                     IKNGSTGVDSEKQLFDCLLITKDNVDKYTGPFVLEQ"
     gene            1015..>1355
                     /locus_tag="EYO87_00410"
     CDS             1015..>1355
                     /locus_tag="EYO87_00410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_004144478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate kinase"
                     /protein_id="HIC64465.1"
                     /translation="MSLLLGIDNGLTVTKAVIFDTAGRVVSMARRRVPQSLPRPRHVQ
                     RDMTGLWTHTAEAIADALSACPRPASDIACIAATAHGDGLYLLDGEGRPLAPGILSLD
                     SRAGEIAARWQA"
BASE COUNT          257 a          449 c          443 g          206 t
ORIGIN      
        1 gatgacgcgc cgcctgcttc tggccgccgt ggccgccgcg ccgctgatgg ccggggccgc
       61 gaatgccgag gggctgataa ccatcatcgt gaacgatccg gcaaacccct actggttcac
      121 cgagggcgag gtcgcccgca aaaccgccga ggaactgggc tataccgcca atgtcgccgc
      181 ccacaagggc gataccaata ccgaaagcac cctgatcgac acggcgatca ccaacaagtc
      241 cgaggcgatc atccttgacc cggccaatgc ggacggatcc atcggcgcgg tcaagaaggc
      301 cgtcgatgcc ggcatcccgg tgatcctggt caatgccgag atcaaccagg aaggcctggc
      361 caaggcccag cttgtgtcga acaatgccca gggtgccgcg cttggcgcgc aggcctgggt
      421 cgaggcggtg ggcgataccg gtcaatatgt cgaattgttc ggcaacccgg ccgacaacaa
      481 tgcccagacc cgctcgaacg ggtacgagac ggtgctgagc cagtatccgg atctggaaaa
      541 ggtcggccgc gaggttgcca actgggaccg cacgcagggc tatcagaaaa cccagtctct
      601 gctgcaggcc aaccccgaca tcatcggcgt gatctcgggc aatgacgaga tggcgcttgg
      661 cgcgatcgcg gcgctgaaag aggccggcaa gctggatcag gtcaaggtcg gcggctttga
      721 cggctcgccc gacgcggtcg aggcggtcaa ggccggcgag atgcagtata ccgtgttgca
      781 gcccgtcgcg gtgttctcgg ccgaggccgt caggcaggcc gacaatttca tcaagaacgg
      841 ttcgaccggg gtggacagcg aaaagcagct tttcgactgc ctgctgatca ccaaggacaa
      901 cgtcgacaag tataccggcc ccttcgtgct ggaacagtaa agccgcaagg ctggggcgcg
      961 cgacgacgcc accgcgcgcc ccagccccga atttccgcgg cgcccgtgat cccaatgtcg
     1021 cttctgcttg gcatcgacaa tggcctgacc gtcaccaagg cagtgatctt cgatacggca
     1081 ggccgcgtgg tctcgatggc ccggcgccgg gtgccgcaat ccctgccccg gccgcgccac
     1141 gtgcagcgcg acatgaccgg tttgtggacc catacagccg aggcgatcgc cgacgccctg
     1201 tcggcctgcc cccgcccggc ctcggatatt gcctgcattg ccgcgaccgc ccacggcgat
     1261 ggcctctacc tgctggatgg cgagggccgg ccgctggcgc cgggcatcct gtctttggac
     1321 agccgcgcgg gcgaaatcgc ggcgcggtgg caggc
//
LOCUS       DTVW01000034            3015 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1068030, whole
            genome shotgun sequence.
ACCESSION   DTVW01000034 DTVW01000000
VERSION     DTVW01000034.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3015)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3015)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3015
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1068030"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..897)
                     /locus_tag="EYO87_00415"
     CDS             complement(<1..897)
                     /locus_tag="EYO87_00415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011750470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bcr/CflA family efflux MFS transporter"
                     /protein_id="HIC64466.1"
                     /translation="MRDPLFRMALLLGLLAAVGPFAVDMYLPALPQVARDLNTSETAA
                     AMTLTAYFITFGIAQMVYGPMADALGRKLPIVIGTAIFLAATLAAILAPSIGWLIAAR
                     ALQGLGSATLMVVPRAVIRDLATGPAAARMMAAIMIVISVSPMLAPLTGSLVMAWGGW
                     REIFAVLAAAAAFSLCLTLFVLPETLPVEHRRPVQLRPILSGAGRLLSDRRFMGLTMI
                     GGFGLASFFVFLSAASFVYTRQYGLSPTGFSLAFAINAVGFFTASQFAGPMADRFGME
                     RVIALAITGFAVLERRRDLERGD"
     gene            1042..1626
                     /locus_tag="EYO87_00420"
     CDS             1042..1626
                     /locus_tag="EYO87_00420"
                     /EC_number="2.7.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007426899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidine kinase"
                     /protein_id="HIC64467.1"
                     /translation="MAKLYFHYSTMNAGKSTLLLQAAHNYRERGMATLLLTAALDGRE
                     GHGRIGSRIGIGAEALTFDAATDMVGLIESRGRGCACIFIDEAQFLSRDQVWQLAHVA
                     DDLRIPVMCYGLRVDFRGELFPGSAALLALADDLREVRTICHCGRKATMVIRRGADGG
                     ALTEGAQVQVGGNETYLSLCRRHWREATARQRPA"
     gene            complement(1623..2126)
                     /locus_tag="EYO87_00425"
     CDS             complement(1623..2126)
                     /locus_tag="EYO87_00425"
                     /inference="COORDINATES: protein motif:HMM:PF04940.10"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BLUF domain-containing protein"
                     /protein_id="HIC64468.1"
                     /translation="MDGAGRFRLRSVKCHENEEVFVPRTLSAILYRSESLVPPNGAEE
                     RDMLVKAALRNARLGITGLLHREADVYYQWIEGPADNLDSLYEDILADPRHRDVELLL
                     RSPIAQRQFDGWSMGRTDRDCTLLFDWVTQHDVSMRAMRPEDFLSFLNDCSFSVLRHD
                     APANPAG"
     gene            2255..2929
                     /locus_tag="EYO87_00430"
     CDS             2255..2929
                     /locus_tag="EYO87_00430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011747981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2270 domain-containing protein"
                     /protein_id="HIC64469.1"
                     /translation="MDGEQHCRKKLDAAEMGVIAHLYRGEVYRSTIWRTRLDTTTNWS
                     VVTLGVALSITYSSPQASPLPLVLVGILIIFFLMLEARRYRYFNVWRARCRWMELHFM
                     APILKEGDLHLEEHWQDRLAEDYLHPAYHVSMWTAIGRRIRRNYVWILLIQAVAYLGK
                     LIVHPDPLVSAGQLLERAAIGPFPGWLVLGVGAFYCISWSIIAILSGKQDAERARMRR
                     DALGMG"
BASE COUNT          572 a          962 c          991 g          490 t
ORIGIN      
        1 atccccgcgt tccagatcac gtcgccgctc caggaccgcg aaaccggtga tggccagcgc
       61 gatcacccgc tccataccga aacggtcggc catggggccg gcgaattgcg aggcggtgaa
      121 gaagcccacg gcattgatcg cgaaggccag cgaaaagccg gtcggcgaca ggccgtactg
      181 gcgcgtgtag acgaagctgg ccgcggacag gaagacgaag aaactggcca gcccgaaacc
      241 gccgatcatg gtcagcccca tgaagcggcg gtccgacagc agccggccgg caccgctcag
      301 gatcgggcgc agctgcacgg ggcggcgatg ttcgaccggc agggtctcgg gcagaacgaa
      361 cagggtcagg cacaggctga aggcggccgc ggcggcaaga accgcgaaga tctcgcgcca
      421 gccgccccaa gccatgacca gcgaaccggt cagcggcgcc agcatcggcg ataccgagat
      481 gacgatcatg atcgcggcca tcattcgggc cgccgccggc ccggtcgcca gatcgcggat
      541 caccgcccgc ggcaccacca tcagcgtggc cgagcccagc ccctgcagtg cccgcgccgc
      601 gatcagccag ccgatcgagg gggccagaat cgcggcaagc gtggcggcca gaaagatcgc
      661 ggtgccgatc acgatgggca gttttcggcc cagggcatcg gccatcggac catagaccat
      721 ctgggcgatg ccgaaagtga tgaaataggc tgtcagcgtc attgccgctg cggtctcgga
      781 cgtgttcaga tccctggcga cctgcggcag cgcaggcaga tacatgtcca ccgcgaaggg
      841 gcccaccgcg gcaagaagac ccagcagaag ggccatgcgg aacaacggat cgcgcattgg
      901 aacaacctga tctgtgactg cgaaaagaca gggcaccgcg cgacggcgac gttcgccacg
      961 gcgacgcggt tgtgccagaa aacggacttc ctggcaatct ccgcggcttg cccgcgcacc
     1021 ggcccggcgc tatctggcgc catggcaaag ctgtatttcc attactcgac catgaacgcg
     1081 ggcaaaagta cactgctgct gcaagccgcc cataattacc gcgagcgcgg catggcgacg
     1141 ctgctgctga cagcggcgct ggacgggcgc gagggacacg gccggatcgg cagccgcatc
     1201 ggcatcggcg ccgaggcgct gaccttcgat gccgcgaccg acatggtcgg gctgatcgaa
     1261 agccggggtc gcggttgcgc ctgcatcttc atcgacgagg cacagtttct gagccgcgat
     1321 caggtctggc aactggcgca cgtggccgac gatctgcgca ttccggtcat gtgctatgga
     1381 ctgcgggtcg atttccgcgg cgaattgttc cccggctcgg ccgcgctgct ggctttggcc
     1441 gacgatctgc gcgaggtccg cacgatctgc cattgcgggc gaaaggcaac gatggtgatc
     1501 cggcgcggcg cggacggcgg cgcgctgacc gaaggcgcgc aggtgcaggt cggcggaaac
     1561 gagacctacc tgtccttgtg ccgccgtcat tggcgcgagg cgacggcgcg acagcgcccc
     1621 gcctagccgg cgggattggc cggcgcgtcg tgccgcagca cactgaacga acaatcgttc
     1681 aggaaagaca gaaaatcctc gggccgcatc gcgcgcatcg atacgtcgtg ctgcgtcacc
     1741 caatcgaaaa gcagcgtgca atcgcgatcg gtgcgtccca tcgaccagcc atcgaactgc
     1801 cgctgcgcga tgggcgagcg cagcagcagc tcgacatcgc gatgtcgggg atcggcaagg
     1861 atgtcttcgt agagcgaatc aagattgtct gccgggcctt cgatccactg gtaatagaca
     1921 tcggcttcgc gatgcagcaa cccggtgata cccaatcgtg cgttgcgcaa cgccgccttg
     1981 accagcatat cccgttcttc ggcgccgttc ggcggcacca gagattcgct gcgatagagg
     2041 attgccgaca atgtacgggg cacgaagacc tcctcattct cgtggcactt gacgcttctt
     2101 aacctgaaac gaccggcacc atccatataa gttttgttaa gtttcagccc gttgcctttg
     2161 gctgagatgg acaagcacga tcagcgcccc tgtgcgcaac cggcttgccg gattcccggc
     2221 ggcctgccaa gctggtcgcg gggagagaat gaccatggat ggcgaacaac attgtcgcaa
     2281 gaagctggat gccgccgaaa tgggcgtgat cgcgcatctc tatcgcggcg aggtctatcg
     2341 ctcgaccatc tggcgcacgc ggctggacac gacgacgaac tggtcggtgg tgacgctggg
     2401 cgtcgccctg tcgatcacct attcatcgcc ccaggcgtcg ccgctgccgc tggttctggt
     2461 cggcatcctg atcatcttct tcctgatgct ggaagcgcgg cgatatcgct atttcaacgt
     2521 ctggcgcgcc cgctgccggt ggatggaact gcatttcatg gcgccgatcc tgaaggaagg
     2581 cgatctgcat ctggaggaac actggcagga ccggctggcc gaggattatc tgcatccggc
     2641 ctatcatgtc agcatgtgga ccgcgatcgg tcggcggatc cggcgcaatt atgtctggat
     2701 cctgctgatc caggccgtgg cttatctggg caagctgatc gtgcatcccg acccgctggt
     2761 ctcggccggc cagttgctgg aacgcgccgc catcggaccg tttccgggct ggctggtcct
     2821 gggggtcggg gcgttctact gcataagctg gtcgatcatc gccatcctca gcggcaagca
     2881 ggacgcggaa cgcgcgcgga tgcggcgcga cgccctgggc atgggctgag atccggccga
     2941 ccgcgcctca gccctggggc gtcatcgcct tgcgctgttc ggccgagatg ccaggcgcgc
     3001 cataaacacc gcgcc
//
LOCUS       DTVW01000035            1064 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1070002, whole
            genome shotgun sequence.
ACCESSION   DTVW01000035 DTVW01000000
VERSION     DTVW01000035.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1064)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1064)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1064
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1070002"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1064)
                     /locus_tag="EYO87_00435"
     CDS             complement(<1..>1064)
                     /locus_tag="EYO87_00435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011046841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="acyl-CoA carboxylase subunit beta"
                     /protein_id="HIC64470.1"
                     /translation="GGSLSETHARKICKIMDMAMQNGAPVIGLNDSGGARIQEGVASL
                     AGYADVFQRNIMASGVIPQISVIMGPCAGGAVYSPAMTDFIFMVKDTSYMFVTGPDVV
                     KTVTNEVVTAEQLGGASTHTRKSSVADGAFEDDVEALSEIRRLFDFLPLNNRDKAPVR
                     PFYDDPDRIEDSLDTLVPDNPNQPYDMKELIVKVADEGDFYEIQKDFAGNIITGFVRI
                     EGRTIGVVANQPMVLAGCLDIDSSRKAARFVRFCDAFEIPILTFVDVPGFLPGTGQEY
                     GGVIKHGAKLLFAYGEATVPKVTVITRKAYGGAYDVMASKHLRGDFNYAWPTAEIAVM
                     GAKGAVEILYRSELGDADKI"
BASE COUNT          179 a          344 c          332 g          209 t
ORIGIN      
        1 cgatcttgtc ggcgtcgccc agttcgctgc gatacaggat ctcgaccgcg cccttggcgc
       61 ccatcaccgc gatttccgcc gtgggccagg catagttgaa atcgccgcgc agatgtttcg
      121 aggccatcac gtcataggcc ccgccatagg ccttgcgcgt gatcaccgtg accttcggca
      181 ccgtcgcctc gccataggcg aacagcagct tcgcgccgtg cttgatgacg ccgccatatt
      241 cctggcccgt gcccggcagg aagcccggca cgtcgacgaa ggtcaggatc gggatctcga
      301 acgcatcgca gaagcgcacg aaacgggcgg ccttgcggct gctgtcgatg tccagacagc
      361 cggccagaac catcggctgg ttggcgacga cgccgatggt gcggccctcg atccgcacga
      421 acccggtgat gatgttgccg gcgaaatcct tctggatttc gtagaaatcg ccttcgtcgg
      481 cgactttcac gatcagttcc ttcatgtcgt agggctggtt cggattgtcg ggaaccagcg
      541 tgtccaggct gtcctcgatc cggtcgggat cgtcgtaaaa gggtcggacc ggggccttgt
      601 cgcggttgtt cagcggcagg aaatcgaaca ggcggcggat ttccgacagc gcctcgacat
      661 catcctcgaa cgcgccatcc gcgacggagg attttcgcgt atgcgtgctg gctccgccaa
      721 gctgttcggc ggtcacgacc tcgttcgtca cggtcttgac cacatcgggc ccggtcacga
      781 acatgtagct ggtatccttc accatgaaga tgaagtcggt catcgcgggg ctgtagaccg
      841 cgccgccggc gcagggcccc atgatgacgc tgatctgcgg gatcacgccc gaggccatga
      901 tgttgcgctg gaacacgtcg gcatagcccg ccaggctggc gacgccttcc tggatgcgcg
      961 cgccgccgct gtcgttcagc ccgatcaccg gcgcgccatt ctgcatcgcc atgtccatga
     1021 tcttgcagat cttgcgggca tgggtttccg acagcgagcc gccg
//
LOCUS       DTVW01000036            1966 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1075940, whole
            genome shotgun sequence.
ACCESSION   DTVW01000036 DTVW01000000
VERSION     DTVW01000036.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1966)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1966)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1966
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1075940"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..269)
                     /locus_tag="EYO87_00440"
     CDS             complement(<1..269)
                     /locus_tag="EYO87_00440"
                     /EC_number="5.4.99.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352248.1"
                     /note="MDM; functions in conversion of succinate to
                     propionate; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA mutase"
                     /protein_id="HIC64471.1"
                     /translation="MTKPTLQAWRRLAEKELKGRDPDELVWDTLEGIPVKPLYTQADT
                     ADLPHMGSLPGIAPFTRGPRATMYAGRPWTIRQYAGFSTAEESNA"
     gene            327..845
                     /locus_tag="EYO87_00445"
     CDS             327..845
                     /locus_tag="EYO87_00445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011749918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4174 domain-containing protein"
                     /protein_id="HIC64472.1"
                     /translation="MKLKFLIFATLLAAMGPAREAPPQAVPQPDPPAPMSPEEMPDSA
                     PAPAAAAELIERDAAQVSPGDFRWKSRPVVIFADTAEDPAFREQIQALRRRPGMLLDR
                     DVIVVTDTDPGANGEWRRLLRPRGFSLVVMDKDGQVKLRKPFPWDVREISRAIDKFPL
                     RLQEIGRTGMSP"
     gene            897..1097
                     /locus_tag="EYO87_00450"
     CDS             897..1097
                     /locus_tag="EYO87_00450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64473.1"
                     /translation="MADPKRIRTRRPAAAPAEPRDTPSRPIRPRVMDKDLRAARSALI
                     EEAERIMGVAPILGRTGPRPGY"
     gene            complement(1045..1665)
                     /locus_tag="EYO87_00455"
     CDS             complement(1045..1665)
                     /locus_tag="EYO87_00455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64474.1"
                     /translation="MTPIPPLDPYLSPQGQQAVIAGLFLAIGWWVVALQNRRRDAKLR
                     ENRVRDVQRALFAEIRANVADLRREDLETYGETIARRIEDNPGFFPTIPTESNDAIFR
                     AIIAEIHVLPRDTIDPIVLYYRQLDVIGAAIDDLRVLDVDLIGPERAADLYRDYINFR
                     LEALDLGEDAMIAIAKDVDGTGRGDMPAAVSNPDAVRSGQESGRRP"
     gene            1720..>1966
                     /locus_tag="EYO87_00460"
     CDS             1720..>1966
                     /locus_tag="EYO87_00460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64475.1"
                     /translation="MTRTLPISALALAFWPVLAPAGSGQGGTTPQPIRADTLERLRWQ
                     ARPVVILAEGAPLAAQVLALTSEPAALAERDIVLLIEG"
BASE COUNT          325 a          661 c          654 g          326 t
ORIGIN      
        1 aaggcgttcg attcctcggc cgtggaaaag cccgcatatt gccggatcgt ccagggccgt
       61 cccgcataca tcgtcgcacg cgggccgcgg gtgaagggcg cgatccccgg caggctgccc
      121 atatgcggca aatccgccgt atcggcctgg gtataaagcg gcttgaccgg aattccctcc
      181 agcgtgtccc agaccagttc gtcggggtcg cggcccttca attccttctc ggccagcctg
      241 cgccaggctt gcagcgtcgg ttttgtcatg atgcgtcctt tccccggccg ggtccgtgct
      301 tatattcagc acaggacgag gtgccgatga agttgaaatt cctgatcttt gcgaccctgc
      361 tggcggcgat gggcccggcg cgcgaagcgc cgccccaggc ggtgccgcag ccggatccgc
      421 ccgcgccgat gagtcccgaa gagatgccgg acagcgcgcc ggccccggca gcggcggccg
      481 agctgatcga acgcgacgcg gcccaggtct cgccggggga tttccggtgg aaatcgcgcc
      541 cggtcgtgat cttcgccgac acggccgagg atccggcctt tcgcgagcag atacaagccc
      601 tgcgccgccg gccggggatg ctgctggacc gcgacgtgat cgtcgtgacc gataccgatc
      661 cgggtgccaa cggagaatgg cgccggctgc tgcgtccgcg cggcttctcg ctggtggtga
      721 tggacaagga cggacaggtc aagctgcgca agccctttcc ctgggacgtg cgcgaaatca
      781 gccgcgccat cgacaagttc cccttgcgtc tgcaggaaat cggccggacg ggcatgtcgc
      841 cctgattgca atcgcgcccg gaacgcccca tattgagacg gcaaagggag acgatgatgg
      901 ctgatccgaa acgcatccgc accaggcgtc cggccgccgc gccggccgag ccacgcgaca
      961 ccccgtcccg cccgatccga ccccgtgtca tggacaagga tctgcgggcg gcccgttccg
     1021 cactgatcga ggaagccgaa cggatcatgg gcgtcgcccc gattcttggc cggaccggac
     1081 cgcgtccggg ttactgacgg ctgcgggcat gtcgccgcgc ccggttccgt caacgtcctt
     1141 ggcgatcgcg atcatcgcgt cctcgcccaa gtccagcgcc tccagcctga aattgatata
     1201 atcacgatac agatccgccg cgcgttcggg cccgatcagg tccacgtcca gcacccgcag
     1261 atcgtcgatg gccgcgccga tcacgtccag ttgccggtaa tacagcacga tcgggtcgat
     1321 cgtgtcgcgc ggcaggacgt gaatttcggc gatgatggca cggaagatgg cgtcgttcga
     1381 ttcggtcggg atggtcggaa aaaagccggg attgtcctcg atccgccggg cgatggtttc
     1441 gccgtaggtt tccagatcct cgcgccgcaa gtccgccaca ttcgcccgga tctcggcgaa
     1501 cagcgcgcgc tggacatcgc ggacgcggtt ttcacgcagc ttggcatcgc gcctgcggtt
     1561 ctgaagcgcc acgacccacc agccgatggc cagaaacagc ccggcgatga ccgcctgctg
     1621 cccctgcgga ctgagatagg gatccagcgg cggtatcggc gtcatcggaa ggaaccggct
     1681 tgcgccgccg ggcgtagggt tgaggcaaag gagaaagcga tgacccgcac cctgccgata
     1741 agtgccctgg cgctggcatt ctggccggtt cttgcccctg ccggttccgg gcagggcggg
     1801 acgacgccgc agccgatccg cgccgatacg ctggaacgtc tgcgctggca ggcccgcccg
     1861 gtggtgatcc tggccgaggg cgcgcccctg gcggcgcagg ttctggccct gacatccgaa
     1921 cccgcggcat tggccgaacg cgacatcgtg ctgctgatcg aggggc
//
LOCUS       DTVW01000037            1215 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1077146, whole
            genome shotgun sequence.
ACCESSION   DTVW01000037 DTVW01000000
VERSION     DTVW01000037.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1215)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1215)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1215
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1077146"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..458
                     /locus_tag="EYO87_00465"
     CDS             <1..458
                     /locus_tag="EYO87_00465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017997833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="carboxypeptidase M32"
                     /protein_id="HIC64476.1"
                     /translation="SDEIQYNLHIMLRFDLERDLISGRLDTRDLVEAWNARFLGDFGV
                     AVNRPANGLLQDVHWSVGLFGYFPTYALGNVYAGCLNAAMREAVPDLDAALAQGDASP
                     GVEWMRENVQRHGGLYPPRHLIEQATGRPVTPEPLLDYLEEKFGRIYGL"
     gene            576..>1215
                     /locus_tag="EYO87_00470"
     CDS             576..>1215
                     /locus_tag="EYO87_00470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007068082.1"
                     /note="involved in the sodium dependent uptake of proline;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:proline symporter"
                     /protein_id="HIC64477.1"
                     /translation="MATGVWISLILYFLLMLAIGVYAWRKSTSSSEEYMLGGRNLPPA
                     VAALSAGASDMSGWLLLGLPGALYAAGLVESWIGIGLFVGALVNWIVVAPRLREQTER
                     YDNSLTIPGFLANRFPTQALTLRVISAVVIVVFFAVYTASGLVGGGKLFQSAFGGNYQ
                     AGVWLTLGVVLAYTVIGGFLAVSLTDFVQGCIMMLALIIMPLVVLMGPGGGGF"
BASE COUNT          182 a          372 c          399 g          262 t
ORIGIN      
        1 aatccgacga aatccagtat aacctgcaca tcatgctgcg cttcgacctg gaacgcgacc
       61 tgatttccgg gcggctggac acgcgcgatc tggtcgaggc gtggaacgcc cgttttctcg
      121 gggattttgg cgttgcggtg aaccggcccg ccaatggcct tttgcaggac gttcattggt
      181 cggttggcct gttcggctat ttcccgacct atgcgcttgg caatgtctat gcgggctgcc
      241 tgaacgccgc gatgcgcgag gccgtcccgg atctggacgc tgcactggcc cagggcgacg
      301 cgtcgccggg ggtcgaatgg atgcgcgaga acgtgcagcg ccatggaggc ttgtatccgc
      361 cgcgccactt gatcgaacag gcaaccggcc gacccgttac gcccgaaccg ctgctggatt
      421 atctggaaga aaaattcggt cgtatctacg ggctttgacg ggcgccatcc cgtccgcgcg
      481 gaaatggggc cgccacgcct ggcggttgcg tccggccgcg tgatctgtca ggccctgttc
      541 catcacggtg tttttaccaa agaaggggcg aagccatggc aaccggagtc tggatcagcc
      601 tgatcctcta ttttctgctg atgctggcca tcggcgtcta cgcttggcgg aaatcgacct
      661 ccagctccga ggaatacatg ctgggcggac gcaacctgcc accggcggtc gcggcgctgt
      721 ctgccggcgc ctcggacatg agtggatggc tgctgctggg cctgcccggc gcgctttatg
      781 ccgccgggct tgtcgaatcc tggatcggga tcgggctttt cgtcggcgcg ctggtcaact
      841 ggatcgtggt ggcgccgcga ctgcgcgaac agaccgaacg ctacgacaat tcgctgacca
      901 ttcccggatt tctcgccaac cgcttcccga cgcaagccct gacgcttcgc gtcatctcgg
      961 ccgtggtgat cgtggtgttc ttcgccgtct ataccgcatc gggcctggtc ggcggcggca
     1021 agctgttcca atcggccttc ggcggcaatt atcaggcggg cgtgtggctg acgctggggg
     1081 tcgtgctggc ctatacggtg atcggcggct ttcttgccgt cagcctgacc gatttcgtcc
     1141 agggctgcat catgatgctg gcgctgatca tcatgccgct ggtggtgctg atgggccctg
     1201 gcggcggcgg cttcg
//
LOCUS       DTVW01000038            1196 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1081794, whole
            genome shotgun sequence.
ACCESSION   DTVW01000038 DTVW01000000
VERSION     DTVW01000038.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1196)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1196)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1196
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1081794"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            133..354
                     /gene="nrdH"
                     /locus_tag="EYO87_00475"
     CDS             133..354
                     /gene="nrdH"
                     /locus_tag="EYO87_00475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010396433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin-like protein NrdH"
                     /protein_id="HIC64478.1"
                     /translation="MTITVYSNPACVQCTATTRALDARGLDYSVIDLTEDEDAMQRVT
                     ALGYRQAPVVIAGEDHWAGFRPDMIGRLS"
     gene            362..775
                     /gene="nrdI"
                     /locus_tag="EYO87_00480"
     CDS             362..775
                     /gene="nrdI"
                     /locus_tag="EYO87_00480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011750602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class Ib ribonucleoside-diphosphate reductase
                     assembly flavoprotein NrdI"
                     /protein_id="HIC64479.1"
                     /translation="MAGLVYYSSASGNTARFVAGLGLAAERIPIRPDSDMPAPARPYV
                     LICPTFADGEGRGAVPRQVIRFLNDPGRRAGLRGVIGAGNRNFGATFALAARVISEKC
                     QVPVLYRFELAGTETDLIRVRAGLDNIMGLECLTP"
     gene            760..>1196
                     /locus_tag="EYO87_00485"
     CDS             760..>1196
                     /locus_tag="EYO87_00485"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011750603.1"
                     /note="Catalyzes the rate-limiting step in dNTP synthesis;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleotide-diphosphate reductase subunit
                     alpha"
                     /protein_id="HIC64480.1"
                     /translation="MLDTVKPDLDYHALNAMLNLYDADGRIRFEADRMAARQYFLQHV
                     NQNTVFFHSLDEKLGYLVDEGYYEAAVLDRYSRDFQRAIWDAAYARKFRFPTFLGALK
                     YYTSYTLKTRDGQRYLERYEDRVVMVALTLARGDEALAMRFMD"
BASE COUNT          209 a          378 c          398 g          211 t
ORIGIN      
        1 aagccgcaag ccaggagacc tgccatggcg acgacaacga caccggacgg tgggtccggc
       61 ggcgtaggtc cggccatgcg ccctgcctgc ccgtcactct cggtccggaa aacaggaaca
      121 gagggcaaga ccatgaccat caccgtttat tccaaccccg cctgcgtgca atgcaccgcc
      181 acgacccgcg cgctggatgc gcgggggctg gattacagcg tcatcgacct gaccgaggac
      241 gaggatgcga tgcagcgcgt taccgcactt ggctatcgtc aagcgccggt ggtgatcgcg
      301 ggcgaggatc actgggcggg cttccggccc gacatgatcg gccgcctgtc ctgaggcgca
      361 ggtggccggg ctggtctatt attcctcggc ctcgggcaat accgcgcggt tcgttgccgg
      421 gctggggctg gcggcggaac gtatcccgat ccgtccggac agcgacatgc ccgccccggc
      481 ccggccctat gtcctgatct gcccgacttt cgcggatggc gaggggcggg gcgcggtgcc
      541 caggcaggtg atccgctttc tgaacgatcc gggccgccgc gcgggcctgc gcggcgtcat
      601 cggcgcgggc aatcgcaatt tcggcgcaac attcgccctg gcggcccgcg tcatctcgga
      661 gaaatgccag gttccggtgc tgtatcgatt cgagctggcg ggaaccgaaa ccgatctgat
      721 ccgcgtccgc gcggggctgg acaacatcat gggactggaa tgcttgacac cgtaaaaccc
      781 gatctcgact atcatgcgct gaacgcgatg ctgaatctgt atgacgcgga cgggcggatc
      841 cggttcgagg ccgaccgcat ggccgcgcgg caatatttcc tgcagcatgt gaaccagaac
      901 acggtcttct ttcattcgct ggacgaaaag ctgggctatc tggtcgatga gggctattac
      961 gaagccgccg tgctggaccg gtattcccgc gatttccagc gcgcgatctg ggacgccgcc
     1021 tatgcgcgca agttccgctt tccgaccttt ctgggcgcgt tgaaatacta caccagctac
     1081 acgctgaaga cccgcgacgg gcagcgctat ctggaacgct acgaggatcg cgtggtgatg
     1141 gtcgcgctga ccctggcgcg gggggacgag gcgctggcca tgcgcttcat ggacga
//
LOCUS       DTVW01000039            1751 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1082781, whole
            genome shotgun sequence.
ACCESSION   DTVW01000039 DTVW01000000
VERSION     DTVW01000039.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1751)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1751)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1751
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1082781"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(91..597)
                     /locus_tag="EYO87_00490"
     CDS             complement(91..597)
                     /locus_tag="EYO87_00490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018700369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease"
                     /protein_id="HIC64481.1"
                     /translation="MLRAINQNAERWALLLFYTVLVLTMAIEVIRREVFSYSSIWGEE
                     IVRYSFIYLVWIGAASAVKERAHIRIDVLFHSVGPRTKAALYILGDLVMLSIAVIALY
                     WSFETVGVSWQFGSVTDGLRISKVWFLMAVPLGFALIIFRLLQSLLRDFGDLIAGRPV
                     FEGNQLFD"
     gene            complement(667..>1751)
                     /locus_tag="EYO87_00495"
     CDS             complement(667..>1751)
                     /locus_tag="EYO87_00495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008205400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HIC64482.1"
                     /translation="GAFTAAVMLGAGGMLWSSEAAAQTRAEEAEREKAAEFTMVIATE
                     YVLGASRSYPLMQLDLKENIQNTTNGRVYVKLAPGGQLGVGGELAQKTQGGTVQAGQF
                     SLSNFAPFAPVVDLINLPYFCGSNQRFTNLVQSDVWKKNVHPAVEQRGFKLLMYLVID
                     PRTVALRKGGAKPILLPEDLRGIKFRVPGSKLLQQYYRLLGANPTPIAWGETPSAIKQ
                     GVADALDPAVGALEIFGFKDVLSHVTFTRFVPDSQCFACNMKWYESLPGEVKEAMDFA
                     AEITTQQNLAKVPAARAYAMAEMRKAGVEFHQLDDSQLAAWKEAGGYQRSEWDSYKTE
                     LAGSMDVFAQLEEAAGTPGRYYVNDA"
BASE COUNT          345 a          573 c          533 g          300 t
ORIGIN      
        1 gaacagcacg aacagcagca ccggcgcgta aaacgaccag tcaagctgga ccgattgttc
       61 ctgaagcgta ttccagagca tgacggaacc tcaatcgaac agctggttgc cctcgaagac
      121 cgggcgtccg gcgatcagat cgccgaagtc gcgcagcaac gattgcagca ggcggaagat
      181 gatcagcgca aatcccagcg gcaccgccat caggaaccac accttcgaaa tgcgcagccc
      241 gtcggtgacc gatccgaact gccagctgac gccgacggtc tcgaaggacc agtaaagcgc
      301 gatcaccgcg atcgacagca tcaccaggtc acccaggata taaagcgcgg ccttggtgcg
      361 cgggccgacc gaatggaaca gcacgtcgat gcggatatgg gcccgttcct tgaccgccga
      421 ggcggcgccg atccagacca gatagatgaa ggaatagcgg acgatctctt cgccccagat
      481 cgacgaatag gaaaagacct cgcgccggat cacctcgatc gccatggtca gcaccagcac
      541 ggtgtaaaac agcagcaagg cccagcgttc ggcattctga ttgattgcgc gcaacatgca
      601 tcgccccctt ttctgtcggg acaggaaaag ggccggacgc gatccgtccg gccccggaac
      661 gtccggtcag gcgtcgttga cgtagtagcg gcccggggtg cccgccgcct cttccagttg
      721 tgcgaagaca tccatcgagc cggccagctc ggtcttgtag ctgtcccatt cgctgcgctg
      781 atagccgccg gcctctttcc aggccgcaag ctggctgtcg tcgagctggt ggaactcgac
      841 cccggccttg cgcatctcgg ccatcgcata ggcccgcgcg gccggcacct tggcgagatt
      901 ctgctgggtg gtgatctcgg cggcgaaatc catcgcctcc ttcacctcgc cgggcaggct
      961 ttcataccat ttcatgttgc aggcaaaaca ctggctgtca ggcacgaacc gggtgaaggt
     1021 cacgtggctc agcacgtcct tgaagccgaa gatctccagc gcgccgaccg ccggatccag
     1081 ggcatcggcg acgccctgct tgatcgccga gggcgtctcg ccccaggcga tcggcgtcgg
     1141 gttggcgccc agaagccggt aatattgctg caacagcttg ctgccgggga cgcggaactt
     1201 gatccccctg agatcctcgg gaagaaggat cggcttggcg ccgcccttgc gcagggccac
     1261 ggtgcggggg tcgatgacca gatacatcag cagcttgaag ccgcgctgtt cgaccgccgg
     1321 atgaacgttc tttttccaga cgtcggactg cacgagattg gtgaaacgct ggttcgagcc
     1381 gcagaaataa ggcaggttga tcaggtccac caccggcgcg aagggcgcga aattcgacaa
     1441 cgagaactgt ccggcctgga ccgtgccgcc ctgggtcttc tgcgccagct cgccgcccac
     1501 gcccagctgc ccgcccggcg ccagcttcac atagacccgg ccattggtgg tgttctggat
     1561 gttttccttc aggtcaagct gcatcagcgg atagctgcgc gatgcgccca ggacatattc
     1621 ggtcgcgatg accatggtga attcggcggc cttttcccgc tctgcctctt ccgcgcgggt
     1681 ctgcgcggcc gcctcggacg accacagcat ccctccggcg cccagcatca ccgccgcggt
     1741 aaaggcgccg c
//
LOCUS       DTVW01000040            1334 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1089324, whole
            genome shotgun sequence.
ACCESSION   DTVW01000040 DTVW01000000
VERSION     DTVW01000040.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1334)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1334)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1334
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1089324"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..304)
                     /locus_tag="EYO87_00500"
     CDS             complement(<1..304)
                     /locus_tag="EYO87_00500"
                     /EC_number="5.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007198684.1"
                     /note="4-deoxy-L-threo-5-hexosulose-uronate
                     ketol-isomerase; catalyzes the interconversion of
                     4-deoxy-L-threo-5-hexosulose uronate to
                     3-deoxy-D-glycero-2,5-hexodiulosonate; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-dehydro-4-deoxy-D-glucuronate isomerase"
                     /protein_id="HIC64483.1"
                     /translation="MTHVETRHAIHPDHAKGMDTAELRRHFLAEGVFADGQIRLVYAH
                     YDRFVIGGAVPAGGSLVLDRIEETKTDSFLERREMGIVNIGETGTVAAAGQSWDMQK"
     gene            complement(316..597)
                     /locus_tag="EYO87_00505"
     CDS             complement(316..597)
                     /locus_tag="EYO87_00505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_353556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HIC64484.1"
                     /translation="MSDPVRTVLAHSPEMMVVRFAFAAGDRGALHSHPHVQSTYVRSG
                     RYRFTMEGREFEIGPGDAFVIPSGAEHGCLCLKAGELIDSFTPRRDDFL"
     gene            complement(594..>1334)
                     /locus_tag="EYO87_00510"
     CDS             complement(594..>1334)
                     /locus_tag="EYO87_00510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_353557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease"
                     /protein_id="HIC64485.1"
                     /translation="LLALMLMSAAWYVARKKGYPTEPFPGFRMMGALFVSAVPGLILI
                     AIIFGGVRSGIFTASESSNVAVVYALLITALVYRSLPWGEFVEATKGAVRTTSMVLLV
                     IGSAACFGWLLAYLRVPAQLVQLLQSVSDNPLVILLLMNLILLILGTFMDMSPLIVIT
                     TPIFLPVAQAFGVDPVHFGVILILNLGIGLCTPPVGAVLFVGCAVGRISIWQAMRTIW
                     PFYGAAFLTLMLVTYIPALSLWLPSVFR"
BASE COUNT          274 a          440 c          424 g          196 t
ORIGIN      
        1 ccttctgcat gtcccaggac tgaccggccg cggcgacggt gcctgtctcg ccgatattca
       61 cgatccccat ctcgcggcgc tcaagaaagc tgtcggtctt cgtttcctcg atcctgtcca
      121 gcaccagcga tccgcccgca ggcaccgcgc cgccaatcac gaagcggtcg taatgggcat
      181 agaccagccg gatctggccg tccgcgaaca cgccctcggc cagaaagtga cggcgcagct
      241 cggcggtatc catgcccttg gcgtggtcgg gatggatcgc gtggcgggtt tcgacatggg
      301 tcatcaggaa tcctttcaca gaaaatcgtc gcggcgcggg gtgaagctgt cgatcaactc
      361 tcccgctttc aggcacaggc agccatgttc ggcccccgag gggatcacga aggcgtcgcc
      421 gggcccgatc tcgaattcgc ggccctccat cgtgaaacgg tagcggcccg agcggacata
      481 ggtcgactgg acatgcgggt ggctgtgcag cgccccccgg tcgcccgccg cgaaggcaaa
      541 gcggacgacc atcatttcgg ggctgtgggc cagcacggtg cggacgggat cgctcatctg
      601 aacaccgagg gcagccacag cgacagtgcc gggatgtagg tgaccagcat cagcgtcagg
      661 aaggccgcgc cgtagaacgg ccagatggtg cgcatcgcct gccagatgct gatacgtccc
      721 accgcgcagc ccacgaacag caccgcgccg accggcggcg tgcacaatcc gatgcccagg
      781 ttcaggatca ggatcacccc gaaatgcacc gggtccacgc cgaaggcctg cgcaacgggc
      841 agaaagatcg gtgtggtgat cacgatcagc ggcgacatgt ccatgaaggt gcccaggatc
      901 agcaggatca ggttcatcag cagcaggatc accagcgggt tgtcggagac gctctgcaaa
      961 agctggacca gctgtgccgg cacgcggaga taggccagaa gccagccgaa acaggccgcg
     1021 ctgccgatga ccagcagcac catcgaagtg gtgcggaccg cgcccttggt cgcttcgacg
     1081 aattcgcccc atggcaggct gcgatagacc agcgccgtga tcagcagtgc atagaccacc
     1141 gcgacattcg aggattccga ggccgtgaag atgcccgacc ggacgccacc gaagatgatc
     1201 gcgatcagga tcagccccgg cacggccgag acgaacagcg cgcccatcat ccggaacccg
     1261 ggaaacggct cggtcggata gcccttcttg cgggccacgt accacgccgc gctcatcagc
     1321 atcagcgcca gcag
//
LOCUS       DTVW01000041            4674 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1090384, whole
            genome shotgun sequence.
ACCESSION   DTVW01000041 DTVW01000000
VERSION     DTVW01000041.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 4674)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4674)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4674
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1090384"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..2455
                     /locus_tag="EYO87_00515"
     CDS             <1..2455
                     /locus_tag="EYO87_00515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007146041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64486.1"
                     /translation="AVYVSLKAPGIAPGDVTSDQLEVIADLAQPGQPAHPLMERRATA
                     PGHLPIGDARNPQDPEPTRQSASDSFYPIPNDPGSVSARYGIATQNIFGIWSPWVVTA
                     FDSSQPDPDAVQIVDANLVPTDPGPPATVCPGELRVEIVLDWRARRPASVAFRGRLFA
                     SATRHDDPPAGMPGAVQTDLAGATRIVTISFAGDVPSVAGGSILALNSQGDATVAPGP
                     AQGSSRRYRLIVPGFSLDYAATPHIGLALSARLQERLAPMRTGAWSPPKLAYASDPRA
                     RLTNIMPIVPLTSLPDAGGQGHARLSWAALPGAAGYVVYTSNEFTLLDRTGQPRAAPD
                     ATLSQRLVAMQAAFDADPDRNAFTRVNDTLLTATSLDVAIPRGSQAIHAWIVLPVSAG
                     GTEAPWPMTSSAMIVYAAPKVAEPAPPRIEVRRIEQGAGFAARIRVETRADAGARPRH
                     LKLYRTRVADAARALDSMGLPVAEISASGGGWSTTPPAPAADGWIDVATGTDAPGGSW
                     KHVWYRAVALADGLPQRGVLGGRSLASPAVPVVIPPAGPPPLSALALSWPGGGPGDVL
                     ASFATDAPVAETPLGAHILEVEALEQGLPAPVIRRRIALAEIAAAAPAAPDSGLWRSA
                     PGQYSLLLRRADVTHSASLTIRLIDPLGRASERVAAIGPGVLLPPPQMSEIDSFSIAG
                     RGKVFTFTLANTRDDMINGQPWRLRIELAPATIVPPTRFPRRGVPGGLPGRGIPLPGG
                     GLTIRGRTQFTLSDGKWIYDAALASIPVTAPDETFAAARQRVGDSLRISIMAKSALRA
                     VSARITGPDGASDSKRVRG"
     gene            2481..>4674
                     /locus_tag="EYO87_00520"
     CDS             2481..>4674
                     /locus_tag="EYO87_00520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004337293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64487.1"
                     /translation="MVTVFTLTPAAAAQSLQDSGLDALGLTAPRLAAAWGTANPGFDA
                     AGLRLTPSGSARAPWIGVLEYLDNGAAFRDVSGAPIIGPVAVFRLHPQSAQRLEALAQ
                     GRYGQPGQPHHRIIPETMVFTGAVPAPDRSPQTWEPGDTLPRTEPYSFHDHRGLIVDP
                     VAVAALFDDLMTAFPALDASNGAARNGAGGVASIAGLASGIQVQICDLHGKPYIAIPG
                     GPGVEGRNGGNPAGTPDGNGLIEPAPGDTLAGTGTAAAARLRLGWATGGVMGAGPLAL
                     PTLPAGVTLPRQFLRAFATDLDWHLRGNRSNATVSGVPADDGKMPADLQPQVRDAITV
                     DYLTDGPDLLAESGRIITRTGGAPGSPLVFAVAPLIADGVGLPPAVGGPGHWPAFPAP
                     DTAAGFATGNANPLAGASAAWTAGTDVVVSLPADLVPDGASVRIYAQRFQLIDSIGEA
                     PSFLRGDGGTAIAAGGQPTRILVGNPMALAPGDPRPSPAVLVFDLVVTPRRGSRRLFA
                     NRRLDIAAGPAALPPDPFGTPDPMAVLPPAIKSVCPAPIFGMTRTTNPAGGLTNPIDI
                     VRALGNETEPREGPRHATMGRLEGITVSGIGNVQLQAGLDWDGVLSGARWTRETRCAL
                     MREGNPGNPAGPDTHVSGVRVTGALGYDLARHAVRRVQPMLPLPGGAAAGTSPGWIVM
                     SGGNNMNPPAPDPANPPAAGTSAGVLLQTVAAIAETPELSLLPAGNPLD"
BASE COUNT          635 a         1727 c         1623 g          689 t
ORIGIN      
        1 tgccgtttat gtctcactga aagcgcccgg tattgcgcct ggtgatgtca catctgacca
       61 gcttgaagtg attgccgatc tggcgcagcc cggccagccc gcccatccgc tgatggaacg
      121 ccgggcgacc gcgcccggcc atctgccgat cggcgatgcc cgcaatccgc aggatcccga
      181 acccacgcgg caaagcgcca gcgacagctt ctatccgatc cccaacgatc cgggcagcgt
      241 cagcgcgcgc tatggcatcg ccacccagaa catcttcggt atctggtcgc cctgggtcgt
      301 caccgcattc gattccagcc agcccgatcc ggatgccgtc cagatcgtcg atgccaatct
      361 ggtccccacc gatcccggtc cgccggccac cgtctgcccg ggcgaattgc gggtcgagat
      421 cgtgctggac tggcgcgcgc ggcgcccggc ctcggtcgcg ttccgcggtc ggcttttcgc
      481 ctcggccacg cggcacgacg atccgcccgc cggaatgccc ggcgcggtcc agaccgatct
      541 ggccggggcg accaggattg tgacgatcag cttcgcaggc gacgtgccca gtgtcgcggg
      601 cggcagcatc ctggcgctga actcgcaggg cgacgccacc gtcgcgccgg gccccgcgca
      661 gggcagcagc cggcgctatc gcctgatcgt gccgggcttc tcgctggatt acgcggccac
      721 gccccatatc gggctggcgc tgtcggcgcg attgcaggaa cggctggcgc ccatgcgaac
      781 cggcgcctgg tcgccgccca aactggccta tgcttcggat ccgcgtgcac gattgaccaa
      841 catcatgccg atcgttccgc tgaccagcct gcccgatgcg gggggccagg ggcacgcgcg
      901 gctgtcctgg gccgccctgc ccggcgccgc cggttacgtc gtctatacct cgaacgaatt
      961 caccctgctg gatcggaccg ggcaaccgcg cgccgccccc gacgccactc tgtcccagcg
     1021 gctggtggcg atgcaggccg ccttcgatgc cgatcccgac cgcaacgcct tcacccgtgt
     1081 caacgacacg cttctgaccg cgaccagtct ggacgtcgcg atcccgcgcg gctcgcaggc
     1141 gatccatgcc tggatcgtgc tgcccgtcag cgccggcggc accgaggcgc cctggcccat
     1201 gacctccagc gcgatgatcg tctatgccgc gcccaaggtg gccgaacccg cgccgccccg
     1261 gatcgaggtg cgccggatcg aacagggcgc gggctttgcc gcccgcatcc gggtcgagac
     1321 gcgggccgat gcgggcgcgc ggccacggca tctgaaactg tatcgcaccc gcgtcgccga
     1381 cgccgcccgc gcgctggaca gcatgggatt gccggtggcc gagatctcgg cctcgggcgg
     1441 gggctggtcc acgacgccgc ccgcgcccgc cgccgatggc tggatcgacg tggcgacggg
     1501 gacggacgcg ccgggcggat cgtggaaaca tgtctggtat cgcgccgtgg ccctggccga
     1561 cggcctgccg caaaggggcg tgctgggcgg ccggtcgctg gcctcgcccg cggtgccggt
     1621 ggtgatcccg cccgccggac cgccgccgct ttcggcgctt gcgctgagct ggccgggcgg
     1681 cggtccgggc gatgtgctgg cgagcttcgc aaccgatgcg cccgtggccg agacgccgct
     1741 gggcgcccat atcctcgagg tcgaggcgct ggaacagggc cttcccgcac cggtcatccg
     1801 ccggcggatc gcccttgccg aaatcgccgc tgccgcgccc gccgcgccgg attccggcct
     1861 gtggcgcagc gcgccggggc aatattcgct gcttttgcgg cgcgccgacg tgacccattc
     1921 ggccagcctg acgatccgcc tgatcgaccc gctgggccgg gcaagcgaac gcgtcgccgc
     1981 gatcgggccc ggcgtgcttc tgccgccgcc acagatgtcc gagatcgaca gtttctcgat
     2041 cgccgggcgc ggcaaggtct ttaccttcac cctcgcgaat acacgcgacg acatgatcaa
     2101 cggccagccc tggcgcctgc ggatcgagct ggcaccggca acgatcgtcc cgccgacccg
     2161 ctttccgcgt cggggcgtgc ccggaggcct gccgggccgg ggaattcccc tgcccggcgg
     2221 cggcctgacc atccgcggac ggacccagtt cacgctgtcg gacggcaaat ggatctatga
     2281 cgcggcgctt gcctcgatcc cggtcacggc gccggacgaa accttcgccg ccgcgcgcca
     2341 gcgggtgggc gacagcctgc ggatctcgat catggcgaaa tcggccctgc gggcggtttc
     2401 agccaggatc accggcccgg acggggccag cgacagcaag agggtcaggg gatgatggcg
     2461 atcgggaaag gaccgcagcg atggtgaccg tcttcacatt gacgccggcg gcggccgcac
     2521 aatcgttgca ggatagcggg ctcgatgcgc ttggcctgac cgcgccgcgc ctggcggctg
     2581 cctggggtac ggccaatccc ggcttcgacg cggctgggct gcggctgaca ccctcgggtt
     2641 cggcgcgggc gccctggatc ggggttctgg aatatctcga caatggcgcg gcctttcgcg
     2701 atgtgtccgg cgcgccgatc atcgggccgg tcgcggtctt ccggctgcat ccgcaatccg
     2761 cccagcggct cgaggcgctg gcccagggcc gctatggcca gcccggccag ccgcatcacc
     2821 gcatcatccc cgagacgatg gtgttcaccg gcgcggtgcc cgccccggac cggtcgcccc
     2881 agacctggga accgggcgat acactgcccc gaaccgagcc ctacagcttt cacgaccatc
     2941 gcgggctgat cgtcgatccg gtcgcggtgg ctgccctgtt cgacgacctg atgacggcgt
     3001 ttccggcgct ggatgcctcg aacggggcgg cgcggaacgg ggcgggtggc gtggccagca
     3061 tcgcgggcct tgcctcgggc atccaggttc agatctgcga tcttcatggc aagccctata
     3121 tcgcgatccc cggcgggccg ggcgtcgaag ggcgcaacgg cggcaatccc gccggcacgc
     3181 ccgacggcaa cggattgatc gagcctgccc ccggcgacac gctggccggg accggcacgg
     3241 cggccgcggc gcggctgcgg ctgggctggg ccacgggcgg ggtgatgggc gcggggccgc
     3301 tggcgctgcc gacgctgcct gccggcgtca cgctgccccg gcaattcctg cgcgccttcg
     3361 ccaccgatct ggactggcac ctgcgcggca atcgcagcaa tgcaaccgtc agcggcgtgc
     3421 ccgccgatga cggcaagatg cccgccgatc tgcaaccaca ggtgcgcgac gcgatcacgg
     3481 tggattacct gaccgacggt cccgacctgc tggccgaatc cggccgcatc atcacccgca
     3541 ccggcggcgc gccgggcagt ccgctggtct ttgccgtggc gccgctgatc gcggacgggg
     3601 tcggcctgcc gccggctgtc ggaggccccg gccactggcc agcctttccc gcgcccgaca
     3661 cggcggcagg ctttgccacc ggcaatgcca acccgctggc cggggcaagt gccgcctgga
     3721 ccgcaggcac ggatgtcgtc gtcagcctgc ccgccgatct ggttcccgac ggggcgtcgg
     3781 tccgcatcta tgcgcaacgc tttcagctga tcgattcgat cggcgaggcg ccatccttcc
     3841 tgcgcggcga tggcggcact gccatcgccg ccgggggcca gcccacacgg atcctggtcg
     3901 gcaatccgat ggcgcttgcg ccgggcgatc ccagacccag cccggcggtg ctggtcttcg
     3961 atctggtggt gacgccgcgc cggggcagcc ggcggctgtt cgccaaccgc cggctggata
     4021 tcgcggcagg cccggccgcg ctgccgcccg acccctttgg cacgcctgat cccatggccg
     4081 tgctgccgcc cgcgatcaag tccgtctgcc ccgctccgat cttcgggatg acccggacca
     4141 ccaatccggc cggcggcctg acgaatccca tcgacatcgt ccgcgccctg ggcaacgaga
     4201 ccgagccgcg cgagggcccg cgccacgcca cgatgggccg gctggagggg atcaccgtct
     4261 cggggatcgg taatgtgcaa ttgcaggccg ggctggactg ggacggggtg ctgtcgggcg
     4321 cccgctggac gcgcgagacg cgctgcgcgc tgatgcgcga gggcaatccc ggcaatccgg
     4381 ccggacccga tacgcatgtc tccggcgtcc gggtgacggg cgctcttggc tatgacctgg
     4441 cccgccatgc ggtcaggcgg gtgcagccga tgctgcctct gccgggcggc gccgcggcgg
     4501 gaacctcgcc gggctggatc gtcatgtcgg gcggcaacaa catgaacccg cccgcccccg
     4561 atcccgcaaa tccgcccgcg gcgggaacct cggccggggt gctgctgcaa accgtggcgg
     4621 ccatcgccga gacgccggaa ctgtcgctgc tgccggcggg caacccgctg gaca
//
LOCUS       DTVW01000042            2741 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1090618, whole
            genome shotgun sequence.
ACCESSION   DTVW01000042 DTVW01000000
VERSION     DTVW01000042.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2741)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2741)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2741
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1090618"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            172..921
                     /gene="pqqC"
                     /locus_tag="EYO87_00525"
     CDS             172..921
                     /gene="pqqC"
                     /locus_tag="EYO87_00525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011047239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroloquinoline-quinone synthase PqqC"
                     /protein_id="HIC64488.1"
                     /translation="MKDLGHGPQSRDEFEARLRAIGAERYHDRHPFHARLHGGDCTPD
                     EVRAWVINRWMYQSRIPMKDAAFMSRVTDPDLRRAWRKRIEDHDGGVAEGGGIRRWLA
                     LARAVGLDPDYVASGAGVMPATRFAVDAYLRFVRDMPLLDAVAASLTELFAPKIHAQR
                     IEGLLAHYDFADDTSLAYFRKRLSEAPDDVAFGLDYVLSHADTRERQDAAAAALIFKT
                     DVLWAQLDALWHGYVQGNIPPGAWQPGEGMA"
     gene            921..1214
                     /gene="pqqD"
                     /locus_tag="EYO87_00530"
     CDS             921..1214
                     /gene="pqqD"
                     /locus_tag="EYO87_00530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011047238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroloquinoline quinone biosynthesis peptide
                     chaperone PqqD"
                     /protein_id="HIC64489.1"
                     /translation="MDPLIAPDQIPYLPRGVRLAHDRVRGIRVLQAPERAMQLDAVGD
                     AILSELDGRRSMAAIATRLAQRYNAPARQIAADLSDFLTGLVERRMVFVKDAP"
     gene            1211..2344
                     /gene="pqqE"
                     /locus_tag="EYO87_00535"
     CDS             1211..2344
                     /gene="pqqE"
                     /locus_tag="EYO87_00535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroloquinoline quinone biosynthesis protein
                     PqqE"
                     /protein_id="HIC64490.1"
                     /translation="MKDHAQPRDLDGNPVRPGLPMAMLAEITHRCPLACPYCSNPVEL
                     TRAQAELPAEDWARVFREAADLGVLQVHVSGGEPGARRDLAQIVTSAREAGLYVNLIT
                     SGIGITRDRLQELDRAGVDHVQLSLQGIRPDMADRISGHPGSWDKKMGFAGWVTEIGL
                     PLTINAVVHRQNMDRLPDMIDLAETLGARRIEVATVQFHGWADLNRAALMPTGDQAAA
                     ARRIVNEARIRLRGRMVIDYVPADHHAIYPKACMGGWGSTGLNVAPDGTVLPCHAAQS
                     ITWMKFENVKDRALSDIWHMSDSFNAFRGTAWMSEPCRSCDRKTVDFGGCRCQAMALA
                     GDARATDPVCSKSPLRARVVARAEEDAASDTADLIYRRMKKGG"
     gene            2348..>2741
                     /locus_tag="EYO87_00540"
     CDS             2348..>2741
                     /locus_tag="EYO87_00540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinoprotein dehydrogenase-associated SoxYZ-like
                     carrier"
                     /protein_id="HIC64491.1"
                     /translation="MKTWLAAALLLASPAFAQDNPMQPSAIWDDLRDSVAGLTEEPPI
                     DPAALDLDAPVRANDAALVPIRLTQAADAPPLSDLTLVIDQNPAPVAAEYSFGPALMP
                     LDFEVRVRVNAYSDVRAIGTQAGGGKVMA"
BASE COUNT          451 a          955 c          910 g          425 t
ORIGIN      
        1 ccatatggcc gctggcgatt ccatcgcggc gctggccgac gtgtcggtcg ggcggcgcat
       61 cttcgtccac atgaacaatt cgaacccgct gaccgatccc gacagcgccg aggccgcgca
      121 ggcccgcagg caaggctggc agatcggccg cgacggcatg gagatcacgc tgtgaaggat
      181 ctaggccacg gcccgcaatc ccgcgacgaa ttcgaggcgc ggctgcgcgc catcggcgcc
      241 gaacgctatc acgaccgcca ccccttccac gcgcggctgc acggcggcga ctgcaccccg
      301 gacgaggtgc gcgcctgggt tatcaaccga tggatgtatc aatcccgcat cccgatgaag
      361 gacgcggcct tcatgtcccg cgtcaccgac cccgatttgc gccgggcctg gcgcaagcgg
      421 atcgaggatc acgacggcgg cgtcgccgaa ggcggcggca tccgccgctg gctggctctg
      481 gcccgcgcag tggggctgga tccggattac gtcgccagcg gcgcgggcgt catgcccgcc
      541 acccgctttg ccgtcgatgc ctatctccgc ttcgtccgtg acatgccgct gctcgatgcg
      601 gtggctgcca gcctgaccga actgttcgcg ccgaaaatcc atgcccagcg gatcgagggg
      661 ctgctggcgc attacgattt cgccgacgat accagccttg cctatttcag aaagcggctg
      721 agcgaggccc ccgacgacgt ggccttcggg ctggattacg tgctgagcca tgccgacacg
      781 cgcgaaagac aggacgcggc agcggcggcg ctgatcttca agaccgacgt gctgtgggcg
      841 cagctggatg cgctgtggca tggctatgtc cagggcaaca tcccccccgg cgcctggcaa
      901 cccggcgagg gaatggcctg atggatccgc tgatcgcccc cgaccagata ccctatctgc
      961 cgcgcggcgt gcgtctggcc catgaccgcg tgcgcggcat ccgcgtgctg caggcgcccg
     1021 aacgcgcgat gcagctggac gccgtcggcg acgccatcct gtccgaactg gacggccggc
     1081 gatccatggc cgccatcgca acccggctgg cgcaacgata caacgccccg gcccggcaga
     1141 tcgctgccga cctaagcgat ttcctgaccg gcctcgtcga gcgccgcatg gtgttcgtga
     1201 aggacgcgcc atgaaggacc acgcccagcc gcgcgacctt gacggcaacc ccgtccgccc
     1261 cggcctgccg atggcgatgc tggccgagat cacgcatcgc tgtcccctcg cctgccccta
     1321 ttgttccaac ccggtcgaac tgacccgcgc gcaggccgaa ctgccggccg aggactgggc
     1381 gagggtgttc cgcgaggccg ccgatctggg cgtgttgcag gtccatgtct cgggcggcga
     1441 gcccggcgcg cgccgcgacc tggcgcagat cgtgaccagc gcgcgcgagg cggggcttta
     1501 cgtcaacctc atcacctcgg gcatcggcat cacgcgcgac cggctgcaag aactggatcg
     1561 cgccggcgtc gatcacgtgc agctgtcgct gcagggcatc cggccggaca tggccgaccg
     1621 catcagcggc catccggggt cgtgggacaa gaagatgggg ttcgccggct gggtcacgga
     1681 gatcggcctt ccgctgacga tcaacgccgt cgtgcatcgg cagaacatgg accggctgcc
     1741 cgacatgatc gaccttgcgg aaacgctggg cgcaagacgg atcgaggtcg ccacggtgca
     1801 gttccacggc tgggccgacc tgaaccgcgc cgcgctgatg cccacgggcg atcaggcggc
     1861 ggcggcacgc cggatcgtca acgaagcccg catccggctg cgcggacgca tggtcatcga
     1921 ctacgtgccc gccgaccatc acgccatcta tcccaaggcc tgcatgggcg gctggggcag
     1981 caccggcctg aatgtcgcgc ccgatggcac ggtgctgccc tgccacgcgg cgcagtccat
     2041 cacctggatg aaattcgaga acgtgaagga tagggccctg tccgacatct ggcatatgtc
     2101 cgacagtttc aacgcctttc gcggcaccgc atggatgtcc gaaccctgcc ggtcctgcga
     2161 tcggaaaacc gtggattttg gcggctgtcg gtgtcaggct atggcattgg cgggcgatgc
     2221 gcgggcgacc gacccggtct gttcgaaatc gccgctgcgt gcgcgggtgg tggcgcgggc
     2281 cgaagaggat gcggcctcgg acaccgccga tctgatctac cgacgcatga aaaagggagg
     2341 ataagtgatg aagacatggc ttgcggccgc gcttctgctg gcatcacccg cattcgcgca
     2401 ggacaacccg atgcagccct ccgcgatctg ggacgatctg cgcgattccg tcgccggcct
     2461 gaccgaggaa ccgcccatcg atccggcggc actggatctg gacgcaccgg ttcgcgccaa
     2521 tgacgcggcg ctggtgccga tccggctgac ccaggccgcc gacgccccgc ccttgtccga
     2581 cctgaccctg gtcatcgacc agaatcccgc ccccgtcgcc gccgaataca gctttggtcc
     2641 ggcgctgatg cccctggatt tcgaggttcg cgtccgtgtc aacgcctatt ccgacgtgcg
     2701 cgccatcgga acgcaggcgg ggggcggcaa ggtcatggcc g
//
LOCUS       DTVW01000043            1324 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1090800, whole
            genome shotgun sequence.
ACCESSION   DTVW01000043 DTVW01000000
VERSION     DTVW01000043.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1324)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1324)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1324
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1090800"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..483)
                     /locus_tag="EYO87_00545"
     CDS             complement(<1..483)
                     /locus_tag="EYO87_00545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020383849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CRTAC1 family protein"
                     /protein_id="HIC64492.1"
                     /translation="MGGGGAFFDYDADGDPDIYAVNGAFITADPPAKHPVNALFRNDA
                     GHFSTVEAGVAHPGVGMGVAAADYDLDGDLDLYLTNYGPNVLYRNDGGLFTDIGAATG
                     VDDPRWGTSCAFADYDLDGDLDLYVANYVSYDPQAANADQIPYTAGNASYAGQAPPSY
                     P"
     gene            complement(699..>1324)
                     /locus_tag="EYO87_00550"
     CDS             complement(699..>1324)
                     /locus_tag="EYO87_00550"
                     /inference="COORDINATES: protein motif:HMM:PF13432.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HIC64493.1"
                     /translation="QIDVALTHYRAAQLVQPAHLETLIQLSGLLLEQGTADEVLKLCR
                     RGIARHPEDVRTSKLYFAQGLVRLRRNQYRQARTAFERALELDPSAAEAWNNLGNALL
                     ALGQATEARRALEAAVSADPTLADAHYNLGSLFLQRGQLDQARRAYLAAIAADSTFGR
                     TYYALATVYQAQGAIPQARQTYQDFIERWQGDPDFLRQAHEKLAQLH"
BASE COUNT          223 a          356 c          498 g          247 t
ORIGIN      
        1 cggataactc ggcggcgcct ggccggcgta gctcgcgttt cctgccgtat aggggatctg
       61 gtcggcgttg gccgcttggg gatcgtagga gacgtagttg gcaacgtaga ggtcgagatc
      121 gccgtccagg tcgtagtcgg cgaaggcgca actggtaccc cagcgcggat catcgacgcc
      181 ggtcgccgcg ccgatgtcgg taaagagtcc gccgtcgttg cgatagagga cgttagggcc
      241 gtagttggtc aggtagaggt ccagatcgcc gtccagatcg tagtcggccg cggccacgcc
      301 catgccgacg cccgggtggg cgacgccagc ctcgacggtg gagaagtgtc cggcgtcgtt
      361 gcggaatagc gcgttgaccg ggtgcttggc cggcgggtcg gcggtgataa aagcgccgtt
      421 gacggcgtag atatcgggat caccatctgc gtcgtagtcg aagaatgcgc cgccgccgcc
      481 catggtttcg gggaagtgtc gtttgcggct cagaccgttt tcgtggtgcc aggccaggcc
      541 gactgaagat gctgtttcga caaagcggat ggactggact gcgggcgcag cttgcggggg
      601 tggatagaat ggatcgggtg ggtcaggggc tgcggtgggg ccgcaggagc agagcaggac
      661 gcagcagagg gccaggatgc gcagtgacat attgatattc aatggagttg ggccagcttt
      721 tcgtgcgcct ggcgcagaaa gtctggatcg ccctgccagc gctcgataaa gtcctgatag
      781 gtctggcgcg cctgggggat tgctccctgg gcctggtaga cggtggccag agcgtagtag
      841 gtgcgcccga aggtcgaatc ggcggcaatg gccgccagat aagctcgacg cgcctggtcc
      901 agttgtcccc gctgcaggaa gaggctaccg agattgtagt gggcatcggc cagggtagga
      961 tcggcgctga cggcggcttc cagtgcccgt cgggcttctg tagcctgacc gagggccaac
     1021 agggcattgc cgagattgtt ccaggcctct gccgcagacg gatctagctc cagggcgcgc
     1081 tcgaaggccg tgcgggcttg gcgatactgg ttgcgccgca gacggactag accctgggcg
     1141 aagtagagct tgctggtgcg gacatcttcg gggtgtcggg cgatgccccg ccggcaaagt
     1201 ttgaggactt cgtctgccgt cccctgttcg agcagcagac cactcagctg gatcagggtt
     1261 tccagatgag ccggctggac gagctgcgcg gcgcgatagt gggtgagggc gacgtcgatc
     1321 tggc
//
LOCUS       DTVW01000044            5397 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1091024, whole
            genome shotgun sequence.
ACCESSION   DTVW01000044 DTVW01000000
VERSION     DTVW01000044.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 5397)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5397)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5397
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1091024"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..329
                     /locus_tag="EYO87_00555"
     CDS             <1..329
                     /locus_tag="EYO87_00555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010397569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HIC64494.1"
                     /translation="AAVTVLSGEIHLATRADMGPDQTRIHQLVASGISHRAPPRNYAR
                     VLGWFASLGESPLPHHPVRIHPLPGQRRRYVAQRNFLTLQRRDGRWQAVWHLEDSGAT
                     PGLPLD"
     gene            complement(429..998)
                     /locus_tag="EYO87_00560"
     CDS             complement(429..998)
                     /locus_tag="EYO87_00560"
                     /EC_number="3.4.23.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009571793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02281 family clan AA aspartic protease"
                     /protein_id="HIC64495.1"
                     /translation="MAADEGMQLAYYILLLVVIGGAMIFELSGRGGRMLRQTILWAVI
                     FAGASFAAQWWIEGGPAQQQVLEGGRVSIPVGRDGHFQLTARLNGTEVRFLVDTGAST
                     IALSRQDARRIGINPDDLAYAGTAMTANGNVKTAPVTIDTLEIGDIVDRNVRAQVIGG
                     NLQGSLLGMSYLRTFARVSFEGDLLILER"
     gene            complement(998..1612)
                     /locus_tag="EYO87_00565"
     CDS             complement(998..1612)
                     /locus_tag="EYO87_00565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011747245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAAT family transporter"
                     /protein_id="HIC64496.1"
                     /translation="MDLSLYITAFVTLFVVIDPIGLTPIFIALTPGHDARQRRLIGIR
                     ALVIAAILLTLFGLAGEAILRGIGISLSAFRIAGGLLLFLTALDMLFERRTERREEQG
                     HSEPAQDPSVFPLAMPLLAGPGALATMILLVGERPGWGHLLMVHLVMLTVLAIALSLF
                     LIATPLARALGRTGVMVVTRLLGMLLAALSVQFVIDGLKGSGLI"
     gene            1787..2050
                     /locus_tag="EYO87_00570"
     CDS             1787..2050
                     /locus_tag="EYO87_00570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011747246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64497.1"
                     /translation="MLNNIGLPGLLLIAVVVLVLFGRGKISSLMGEVGKGITAFKKGV
                     KDGSEEVEDAASDEERRETPREVGRDVPGETARDVTPHTTDRS"
     gene            2073..2564
                     /gene="tatB"
                     /locus_tag="EYO87_00575"
     CDS             2073..2564
                     /gene="tatB"
                     /locus_tag="EYO87_00575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011747247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatB"
                     /protein_id="HIC64498.1"
                     /translation="MFDIGWTELLLIGVVALIVVGPKDLPHLFHSLGRFTAKARGMAR
                     EFTSAMEDAAKGSGLDEASNSIRDLKSLTSKKSLGLDALDRAAERFEKWDPKIPDAKA
                     RPKPDPGATPQPAGDGLSPASEPAAPPPTAVEPAAPDHAADAATPGQRRLHAVRRSDR
                     KDH"
     gene            2500..3429
                     /gene="tatC"
                     /locus_tag="EYO87_00580"
     CDS             2500..3429
                     /gene="tatC"
                     /locus_tag="EYO87_00580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017927408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatC"
                     /protein_id="HIC64499.1"
                     /translation="MPPPPASAACTRCAAATGKTTDLASNPRDDDIDDSSAPLIEHLA
                     ELRTRIIWSLVAFIVAMVLSYTIWNPIYNFLTRPICFALEARGQECGLILLKLQEGFF
                     VAIRISLLGGFVLAFPIIAYQMWRFVAPGLYRNEKQAFLPFLVASPVMFFLGAAFAYY
                     IILPMAYDFFLGFQQGPLTLPDDGTAPPAVTDNPMAAIVFQGSVDEYLSLTTKFILAF
                     GLSFQLPVLLTLMGKAGLVSAEGLGAVRKYAVVAILMLAAVATPPDVVSQVVLFTVVY
                     GLYEISIQLVRRIERRREADLRAQGLWVEDDEE"
     gene            3426..4271
                     /locus_tag="EYO87_00585"
     CDS             3426..4271
                     /locus_tag="EYO87_00585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HIC64500.1"
                     /translation="MSDPDVLDRIAAALERLAPPPAPVPAFTEASAYIWHPDPDRLEP
                     VAGVNRVDLVQLIGIDRARDILLANTLQFARGFGANNALLWGARGMGKSSLVKAVHAE
                     VVAQGLPLILVEIAREDLGSVGRLLALLGGAKERRFLLFSDDLSFSHDDTQYKSLKAV
                     LDGGIGGRPENVILYATSNRRHLMPRDMIDNERSTAIHPGEAVEEKVSLSDRFGLWLG
                     FHPCSQDDYLAMIRGYCDAYGLTIADDVLRAEAVEWQATRGGRSGRVAWQFFTDLAGR
                     NGIAV"
     gene            4353..4697
                     /locus_tag="EYO87_00590"
     CDS             4353..4697
                     /locus_tag="EYO87_00590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006473374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glyoxalase/bleomycin resistance/dioxygenase
                     family protein"
                     /protein_id="HIC64501.1"
                     /translation="MHLTAIFAQLCCRDLEVGIAWFSALFARPPDARPMDGLAEWHHG
                     AEAGLQLRLAPDHAGHGTLTLIVPDLAAQRERLQQSAMDPGGIEDVEAGRILRLADPD
                     ENLVVLVQPRSD"
     gene            4753..>5397
                     /locus_tag="EYO87_00595"
     CDS             4753..>5397
                     /locus_tag="EYO87_00595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010397424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XRE family transcriptional regulator"
                     /protein_id="HIC64502.1"
                     /translation="MSGRTQNNVLTGTRIRERRLALSRRQADVARAAGISPAYLNLIE
                     HNRRPVSDDLVMRLSEVLEVPADELLEGHEEVRLAALREAAARLGGADIGAPETALAP
                     DFLARFPGWAAILVAHARRSEALEAQLVSLSDRMRQDPYLLTTLHEILSAVTAIRSTA
                     SILADEAAIPAEWLSRFHANLDQDSQRLSVTAQALVAYLDSFEAEDTTATPQEEV"
BASE COUNT          896 a         1783 c         1805 g          913 t
ORIGIN      
        1 aggcggcggt gacggtgctg tcgggcgaga tccatctggc gacgcgggcc gatatggggc
       61 ccgaccaaac gcggattcat cagcttgtcg cctcgggcat ctcgcatcgc gcgccgccgc
      121 gcaattatgc gcgggttctg ggctggttcg cgagtctcgg cgaatcgccg ctgccgcatc
      181 atccggtccg catccacccg ctgccgggcc agcgccgacg ctatgtggcg cagcggaatt
      241 tcctgacgct gcaacggcgt gacgggcgct ggcaggcggt ctggcatctg gaagacagcg
      301 gcgcgacgcc gggtctgccg ctggactgac gccgcacagc cctgacgcgg cctgcgcggc
      361 ccagcccgga caggcgcatc gcacaaggct gcggcgcgag accgggaccg gccgggccgg
      421 gatgcggatc agcgttcgag aatcagcaaa tcgccttcga aactgacacg ggcgaaggtg
      481 cgcaggtagg acatgcccag aagcgaaccc tgaagattgc caccgatcac ctgggcgcgg
      541 acattgcggt ccacgatgtc gccgatctcc agggtgtcga tggtcacggg ggcggtcttg
      601 acgttgccat tggcggtcat cgccgtgcca gcataggcca gatcgtccgg attgatgccg
      661 atgcggcggg catcctgccg gctgagggcg atggtcgagg cgccggtatc gacgaggaaa
      721 cggacctcgg tgccgttcag ccgcgcggtc agttggaaat ggccgtcgcg gccgaccggg
      781 atcgagaccc ggccgccttc cagaacctgc tgctgcgccg gtccgccctc gatccaccat
      841 tgcgccgcga agctggcgcc ggcgaagatc accgcccaga gaatcgtctg gcgcagcatt
      901 cgtccgccgc ggccggacaa ttcaaagatc atcgcgccgc cgatcaccac cagcagcagg
      961 atgtaatagg ccagttgcat cccctcatcg gctgccatca gatcagcccc gatcccttca
     1021 gcccgtcgat gacgaactgc accgacagcg cggccagcag catccccaga agccgcgtca
     1081 ccaccatgac cccggtgcgg ccaagcgcgc gcgccagcgg cgtcgcgatc aagaacagcg
     1141 acagggcgat ggccagcacc gtcagcatga ccagatggac catcagcaga tgtccccagc
     1201 cgggccgttc gccgaccagc aggatcatcg tcgccagcgc ccccgggcca gccagcagcg
     1261 gcatcgccag gggaaagacc gacgggtctt gcgccggttc ggaatggccc tgttcctcgc
     1321 gccgttcggt ccggcgttcg aacagcatgt ccagcgcggt caggaacagc agcagaccgc
     1381 ccgcgatgcg gaaggccgac agcgaaatgc cgatgccgcg caggatcgcc tcgcccgcaa
     1441 ggccgaacag cgtcagcagg atcgcggcga tcaccagcgc ccggatgccg atcagccgtc
     1501 gctgccgggc atcgtgaccg ggtgtcaggg caatgaagat gggcgtcagg ccgatcgggt
     1561 cgatgaccac gaaaagcgtc acgaacgccg tgatgtaaag cgacagatcc atccgctctt
     1621 atcgcccggc ccgcgcgcgc tgccaagcgg gcaggacgga tccctctgcg ggcgcgggca
     1681 ggggggcttc ggggtcgtgc ttcacgcatt cgggctttgc aatcggtggc gcaaaaccct
     1741 aaatgtgtcg cgcgggcggg gaaaccgccc ggcaagggag acaagaatgc tgaacaatat
     1801 tggccttccc ggccttctgc tgatcgcggt cgtggttctg gtcctgttcg gacgcggcaa
     1861 gatctcgtcg ttgatgggcg aggtcggcaa gggaatcacc gccttcaaga agggcgtcaa
     1921 ggacggcagc gaagaggtcg aggacgccgc gtcggacgaa gagcgccgcg aaaccccgcg
     1981 cgaggtcggc cgggatgttc cgggcgagac cgcgcgcgac gtgacgccgc acacgaccga
     2041 ccgcagctga tcggcgaaag gccggacgca tcatgttcga tatcggctgg accgagcttt
     2101 tgctgatcgg ggtcgtggcg ctgatcgtgg tcggccccaa ggatcttccg catctgttcc
     2161 attcgctggg tcggttcacg gccaaggcgc gcggaatggc ccgcgaattc acctcggcga
     2221 tggaggatgc cgccaaggga tcgggtcttg acgaggcgtc gaacagcatc cgcgatctga
     2281 aaagcctgac ctcgaagaaa tccctgggcc tcgatgcgct ggaccgcgcg gccgaacggt
     2341 tcgagaaatg ggatcccaag atccccgatg cgaaggccag gccgaagccc gatccgggcg
     2401 ccacgccgca accggcgggt gacggcctga gcccggccag cgagcccgcc gccccgcccc
     2461 cgaccgcggt cgagcccgcg gcaccggatc atgccgcgga tgccgccacc cccggccagc
     2521 gccgcctgca cgcggtgcgc cgcagcgaca ggaaagacca ctgacttggc cagcaatccc
     2581 cgcgacgacg atatcgacga cagttccgcg ccgctgatcg aacatctggc cgagctgcgg
     2641 acgcggatca tctggtcgct ggtggccttc atcgtggcga tggtgctgtc ctacacgatc
     2701 tggaatccga tctacaattt cctgacccgc ccgatctgct tcgcgcttga ggcacgaggt
     2761 caggaatgcg ggcttatcct tctgaaattg caggaaggtt tcttcgtcgc catccgcatc
     2821 tcgctgttgg gcggctttgt tctggccttt ccgatcatcg cctaccagat gtggcgtttc
     2881 gtggcgccgg gcctctaccg gaacgagaaa caggcgttcc tgcccttcct tgtcgcctct
     2941 ccggtgatgt ttttccttgg cgcggccttc gcctactaca tcatcctgcc gatggcctac
     3001 gactttttcc tgggcttcca gcaggggccg ctgaccctgc ccgatgacgg caccgcgccg
     3061 ccggccgtga ccgacaatcc gatggcggcg atcgtgttcc agggttcggt cgatgaatac
     3121 ctgtcgctga cgaccaagtt catccttgcc ttcgggctga gctttcaact gcccgtcctg
     3181 ctgacgctga tgggcaaggc gggccttgtc agtgccgagg gtctgggcgc ggtgcgcaaa
     3241 tatgcggtcg tggcgatcct gatgctggcc gcggtcgcca cgccccccga tgtggtgtcg
     3301 caggtggtgc tgttcaccgt ggtctatggt ctttacgaaa tctcgatcca gcttgtccgc
     3361 cgcatcgaaa gacgccgcga ggcggatctg cgggcgcagg gtctgtgggt cgaggatgac
     3421 gaggaatgag cgatcctgac gttctcgacc ggatcgcggc cgcgcttgaa cgtctggcgc
     3481 cgccgcccgc tccggtgccg gccttcaccg aagcctcggc ctatatctgg catcccgatc
     3541 ccgaccggct ggaacccgtc gcgggcgtga atcgcgtcga tctggtgcaa ctgatcggca
     3601 tcgaccgcgc cagggacatc ctgctggcca atacgctgca attcgcgcgc ggcttcggcg
     3661 cgaacaacgc gcttctctgg ggcgcgcgcg ggatgggcaa atcgtcgctg gtcaaggccg
     3721 ttcatgccga ggtggtggcg cagggcctgc cgctgatcct ggtcgagatc gcgcgcgagg
     3781 atctgggttc ggtcggccgg cttctggccc tgctgggcgg ggcgaaggaa cggcgcttcc
     3841 tgctgttctc ggacgatctg tccttcagcc atgacgacac gcaatacaag tcgctgaagg
     3901 cggtgctgga tggcgggatc ggcggccggc ccgagaacgt gatcctctac gccacctcga
     3961 accggcgtca cctgatgccc cgcgacatga tcgacaacga acgttcgacc gcgatccatc
     4021 cgggcgaggc ggtcgaggag aaggtctctc tgtcggacag gttcgggctg tggctgggct
     4081 ttcatccctg ttcgcaggat gattatctgg cgatgatccg tggctattgc gacgcctatg
     4141 gcctgaccat cgcggatgat gtcctgcgcg ccgaggcagt cgaatggcag gccacgcgcg
     4201 gcggccgctc gggccgggtg gcctggcagt tctttaccga ccttgccggg cgcaacggca
     4261 tcgccgtctg atccggccgc cctccgccga ggattgcggg atcgggcccg gtccggcatt
     4321 cttcggcgtc gtcctttcga cgcaggcccg cgatgcatct gaccgcaatc tttgcgcaac
     4381 tctgctgccg cgatctggaa gtcggcatcg cctggttctc ggccctgttc gcgcgcccgc
     4441 ccgatgcccg accgatggac gggctggccg aatggcatca cggcgccgag gcgggattgc
     4501 agcttcgtct tgccccggat cacgcggggc acgggacgtt gacgctgatc gtgccggatc
     4561 tggccgccca gcgggaacgc ctgcaacaat ccgcgatgga tcccggcggg atcgaggatg
     4621 tcgaggccgg gcggatcctg cggcttgccg atcccgatga aaatctggtc gtgctggtgc
     4681 aaccgcgatc cgactgattc gctgcggcga aaacccttgt gcaggcgggc agggcgggct
     4741 ttcatcgcgc ccatgagcgg gcgcacccag aataatgtcc tgaccggaac ccggatccgc
     4801 gaacgccgtc ttgccttgtc ccgccggcag gcggatgtgg cgcgggcggc ggggatttcg
     4861 cccgcctatc tgaacctcat cgaacataac cgccgcccgg taagcgacga tcttgtcatg
     4921 cgcctgtccg aggttctcga ggtgcccgcc gacgagttgc tcgagggtca cgaagaggtc
     4981 cgcctcgcgg cgctgcgcga agcggcggcg cggctgggcg gggctgatat cggcgcacct
     5041 gaaaccgcgc tggcgccgga tttcctggcc cgctttccgg gctgggccgc aatcctcgtc
     5101 gcccatgccc gtcgctccga ggcactggaa gcgcagcttg tcagcctgtc cgaccggatg
     5161 cggcaggatc cctatctgct gacgaccctg cacgagatcc tgtcggccgt gaccgcgatc
     5221 cgatcgaccg cctcgatcct ggccgacgag gccgcgatcc cggccgaatg gctgtcgcgc
     5281 ttccatgcca acctggatca ggacagccag cggctgtcgg tcacggcgca ggcgctggtc
     5341 gcctatctcg acagtttcga agcggaagac acgaccgcca cgccgcagga agaagtc
//
LOCUS       DTVW01000045            2591 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1091478, whole
            genome shotgun sequence.
ACCESSION   DTVW01000045 DTVW01000000
VERSION     DTVW01000045.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2591)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2591)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2591
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1091478"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..426
                     /locus_tag="EYO87_00600"
     CDS             <1..426
                     /locus_tag="EYO87_00600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011750354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase HflX"
                     /protein_id="HIC64503.1"
                     /translation="SHPETEEQAEDVAEILGSLGVDEDVDLIEVWNKIDALSADTRAA
                     LRRTDARTQGVQAVSALSGEGLDDLIAAIDAHLAQALDEPREAAVVTLEFADGRRRAW
                     LHEAGVVEREEAGEDGLVLHLRWTARQKAGFEALDQPTD"
     gene            501..1106
                     /locus_tag="EYO87_00605"
     CDS             501..1106
                     /locus_tag="EYO87_00605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013068392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HIC64504.1"
                     /translation="MDWNERFSGEEFHFGEAPAAFVRDHLGGLGAGAHVLTIAEGEGR
                     NAVWLARQGCRVTAIEPTGTGREKAMALAARHGVTMEWRQESLESYGWPPNGFDVVLG
                     CFFQFADPRLRAEILAGMARTTMPGGTVFLHGFSTRQLGNGSGGPRSEPNLWTPDRLL
                     PAFPGWQVVRAEDYDAVLDEGPGHSGPAALVDVIVRKPGRP"
     gene            complement(1266..2075)
                     /locus_tag="EYO87_00610"
     CDS             complement(1266..2075)
                     /locus_tag="EYO87_00610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009571182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HIC64505.1"
                     /translation="MSALLIPALTLTATGAAAGILAGLLGVGGGIILVPAFLFAFTRA
                     GYSGPDLMQICLATSLATIIVTSMRSVMAHHRRAAVDWSILRDWAVWIAIGALLGVLT
                     VGALRTRTLQVIFAVLVVLIASFMAISRPHWRLGTEMPTGIRRALIGPVIGFVSVLVG
                     IGGGSMGVPLMTLHGRSMHRAVATSAGFGVLIAVPSVAAFLIVPASDAPPWTLGSVNL
                     PALFITIAMTLITAPFGAALAHRTDPARLKRIFAIFLFLVAINMMRKALTG"
     gene            complement(2125..>2591)
                     /locus_tag="EYO87_00615"
     CDS             complement(2125..>2591)
                     /locus_tag="EYO87_00615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018000458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tRNA dihydrouridine(20/20a) synthase DusA"
                     /protein_id="HIC64506.1"
                     /translation="WLQGLSPRENREVPPLDYPLVHAMKAEFPHLHLSVNGGVVSLDQ
                     ARDHLRVMDGAMIGRAAYHQPWDILGGADLLWDQMPPFATPRQVAHAMRPLIAQHLGT
                     GGRLHQISRHMLGLFHGQPGARGWKRTLSEGASKGGIEVYDAALAQVTRMAA"
BASE COUNT          445 a          856 c          923 g          367 t
ORIGIN      
        1 agccatcccg agaccgagga acaggccgaa gatgtggccg agatccttgg atccttgggt
       61 gtcgacgagg atgtggacct gatcgaggtc tggaacaaga tcgacgccct gtcggccgat
      121 acccgcgccg ccctgcgccg caccgatgcg cggacgcagg gggtgcaggc ggtcagcgcc
      181 ctgtcgggcg aggggcttga cgacctgatc gctgcgatcg acgcgcatct ggcgcaggcg
      241 ctggacgagc cgcgcgaagc ggcggtcgtg acgctggaat tcgccgatgg ccggcgccgg
      301 gcctggctgc acgaggccgg ggtggtcgaa cgcgaagagg ccggcgagga cgggctggtc
      361 ctgcatctgc gctggacggc gcgccagaag gcagggttcg aggcgctgga tcagccgacc
      421 gattgacttt ccggccgggc ggccggcgcc ctgtgtccgg cctcccggcg gtatcttcac
      481 caggacaagg aggatcgcgg atggactgga acgaacgttt cagcggagag gaatttcatt
      541 tcggcgaggc gccggccgcc ttcgtgcgcg atcacttggg cggcctgggc gcaggcgccc
      601 atgtgctgac catcgccgag ggcgagggcc ggaacgccgt ctggctggcg cggcagggct
      661 gtcgcgtgac cgcgatcgag ccgaccggga ccggtcgtga aaaggcgatg gcgctggccg
      721 cgcggcatgg cgtgacaatg gaatggcggc aggaaagcct ggaatcctat ggctggccgc
      781 cgaacggttt cgacgtcgtc ctgggctgtt tcttccagtt cgccgatcca cgcctgcggg
      841 ccgaaatcct ggccgggatg gcgcggacga cgatgcccgg cggcaccgtg ttcctgcacg
      901 gcttcagcac gcggcaattg gggaacggct cgggcgggcc gcgcagcgaa ccgaatctgt
      961 ggacgccgga ccgtctgttg ccggccttcc ccggttggca ggtggtcagg gccgaggatt
     1021 atgacgccgt gctggacgag gggccgggcc attcgggacc ggcggccctg gtcgatgtga
     1081 tcgtccgcaa gcctggccgg ccttgaacgc aagggtcgtc tggcgagctg tcctgccgac
     1141 aactcccgcc actgcgaccg gacagggccg gcccgccacc atctgcatcc cgtcgccgcg
     1201 attggaacca ggccgatggt tggggctggc ctggcctggg gccttcgcag ggcggctgcc
     1261 gggattcagc ctgtcagggc cttgcgcatc atgttgatgg cgacgaggaa cagaaagatc
     1321 gcgaagatcc gcttcagccg ggcagggtcc gtgcgatggg ccagcgcggc gccgaaaggc
     1381 gccgtgatca gcgtcatggc gatggtgatg aaaagcgcgg gcagattgac cgaacccagg
     1441 gtccagggcg gcgcatccga ggccggaacg atcaggaacg ccgcgaccga gggcaccgcg
     1501 atcagcacgc cgaacccggc cgaggtcgcg accgcgcgat gcatcgaccg tccgtgcagc
     1561 gtcatcagcg gcacgcccat gctgccgcca ccgatcccga ccaggaccga aacgaagccg
     1621 atcaccggac cgatcagcgc gcgccggatg ccggtgggca tctcggttcc cagccgccaa
     1681 tgcggccgcg agatggccat gaaactggcg atcagcacga ccagcaccgc gaagatgacc
     1741 tgcagcgtgc gggttcgcag cgcgccgacc gtcagcaccc ccagaagcgc cccgatggcg
     1801 atccagaccg cccagtcccg caggatcgac caatccaccg ccgcgcgccg gtgatgggcc
     1861 atgaccgacc gcatcgacgt gacgatgatc gttgccagcg aggtcgccag acagatctgc
     1921 atcaggtccg gcccggaata gcccgcccgc gtgaaggcaa aaaggaaggc cggaacgagg
     1981 atgatcccgc cgccgacgcc cagcagtccg gcaagaattc ccgctgcggc gcccgtggcg
     2041 gtcagggtca gggcggggat cagcagcgcg ctcatgcggc tgtggttatc gccggcgcgc
     2101 gacgggcgcc agagcgaaat cggctcacgc agccatccgc gtcacctgcg ccagtgccgc
     2161 gtcatagacc tcgatcccgc ctttcgatgc gccttctgac agcgtccgct tccatcctcg
     2221 cgcgcccggc tggccatgaa acagacccag catgtggcgc gagatctgat gcagccgccc
     2281 gcccgtgccc agatgctgcg cgatcagcgg gcgcatggca tgggcgacct gtcgcggcgt
     2341 cgcgaagggc ggcatctggt cccacagcag atcggccccg cccagaatgt cccatggctg
     2401 gtgataggcc gcacgtccga tcatcgcgcc atccatgacg cgcaggtgat cgcgcgcctg
     2461 atccagcgag acgacgccgc cgttgaccga caggtgcaga tggggaaatt cggccttcat
     2521 cgcatggacc agcggataat ccagcggcgg cacctcgcgg ttctcgcgcg gcgacagacc
     2581 ttgcagccat g
//
LOCUS       DTVW01000046            1850 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_10921, whole
            genome shotgun sequence.
ACCESSION   DTVW01000046 DTVW01000000
VERSION     DTVW01000046.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1850)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1850)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1850
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_10921"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..789
                     /locus_tag="EYO87_00620"
     CDS             <1..789
                     /locus_tag="EYO87_00620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011046884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HIC64507.1"
                     /translation="ADTRVRALSFTGSTEIGRLLYRQSADTVKRLVMELGGHAPFIVF
                     KGADLDRAVAEGIKAKFATSGQDCLGANRFYIQRDIYDDFCARFTAAVEKLTLAPGMR
                     DPDIGPLIHDRQIEKQMAHVEDALAKGARLVTGGGVDEAQGPLFFRPTVLADVPDEAA
                     IMSQETFGPVAALSPFDTEDEVIARANATEYGLVAYLHSHDPRRIYRLTRALQYGMVA
                     VNRTKVTGAPIPFGGMKQSGIGREGARQGLEAFTEIKYVCRDWA"
     gene            815..>1850
                     /locus_tag="EYO87_00625"
     CDS             815..>1850
                     /locus_tag="EYO87_00625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008282596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HIC64508.1"
                     /translation="MLTNDELAKWDRESFFHPSTNLGQFARGEGPQRIVTGGEGVFIT
                     DRDGNRLLDGFAGLYCVNVGYGRKEIAEAIADQARELSYYHAYAGHGSEASITLARMV
                     MERAPEGMARVYFGLGGSDANETNIKLVWYYNNILGRPEKKKIISRWRGYHGSGLMTG
                     SLTGLDLFHKKFDLPLAQVIHTEAPYPYRRPDLAMSESDFTAYCVEKLEDLIAAEGAD
                     TIAAFIGEPVLGTGGIVPPPAGYWPAIQKVLDCHDILLIADEVVTGFGRLGSMFGSDH
                     YAMKPDLITSAKGLTSAYAPLSASIVGQRMWDVLTRGTDEYGVLGHGWTYSAHPIGAA
                     AGIANLKLIDH"
BASE COUNT          349 a          576 c          610 g          315 t
ORIGIN      
        1 gccgataccc gcgtccgggc cctgtccttt accggatcga ccgagatcgg gcggctgctt
       61 tatcgccaat cggccgatac ggtgaaacgt ctggtcatgg aactgggcgg acacgcgccg
      121 ttcatcgtct tcaagggcgc cgatctggac cgggccgtgg ccgagggcat caaggcgaaa
      181 ttcgcgacct cgggacagga ttgcctgggc gcgaaccgct tctatatcca gcgcgacatc
      241 tatgacgatt tctgtgcccg cttcaccgcc gcagtcgaaa agctgaccct ggcaccgggc
      301 atgagagatc ccgatatcgg cccgctgatc catgaccgcc agatcgaaaa gcagatggcg
      361 catgtcgagg atgccctggc caagggcgcg cggctggtga ccgggggtgg agtggacgag
      421 gcccaggggc cgctgttctt caggccgacg gttctggccg atgtgccaga cgaggccgcg
      481 atcatgtcgc aggaaacctt tggtcccgtc gccgcgctga gtccgttcga caccgaggac
      541 gaggtgatcg cgcgggccaa tgccaccgaa tacgggctgg tcgcctatct tcacagccac
      601 gacccgcgcc ggatctatcg gctgacgcgg gcgttgcaat acggcatggt cgcggtgaac
      661 cgcaccaagg tcaccggcgc gccgatcccc ttcggcggca tgaagcaatc cgggatcggc
      721 cgcgagggcg cgcgtcaggg gctcgaagcc tttaccgaaa tcaaatatgt ctgccgcgac
      781 tgggcctgaa ccaccggcga tgaaaggaaa cgagatgctg accaatgacg aactggcgaa
      841 gtgggaccgc gagagctttt tccatccttc gaccaatctg ggtcaattcg cgcgaggcga
      901 gggcccgcag cggatcgtga ccggcggtga gggcgttttc atcaccgacc gcgacggcaa
      961 ccgcctgctg gacgggttcg ccgggcttta ctgcgtgaat gtcggctatg ggcgcaagga
     1021 gatcgccgaa gccatcgccg atcaggcgcg cgaactgtcc tattaccacg cctatgcggg
     1081 acacggctcg gaggccagca tcactctggc caggatggtg atggagcgcg cgcccgaagg
     1141 tatggcgcgg gtctatttcg ggcttggcgg ctcggacgcg aatgaaacca acatcaagct
     1201 ggtctggtat tacaacaaca tcctgggccg gcccgagaag aagaagatca tctcgcgctg
     1261 gcgcggctat cacggttcgg gcctgatgac cggcagcctg accgggctgg acctgtttca
     1321 caagaaattc gatctgccgc tggcgcaggt gatccatacc gaggcgccct atccttaccg
     1381 ccgacccgac ctggccatgt ccgagtccga tttcaccgcc tattgcgtcg aaaagctgga
     1441 agacctgatc gccgccgagg gcgccgacac gatcgccgcc ttcatcggcg agccggtcct
     1501 gggcacgggc ggcatcgtgc cgccgccagc cggctactgg cccgcgatcc agaaggtgct
     1561 ggactgccac gacatcctgc tgatcgcgga tgaggtggtc acggggttcg ggcgtctggg
     1621 cagcatgttc ggcagcgatc attacgcgat gaagcccgac ctgatcacca gcgccaaggg
     1681 cttgaccagc gcctatgcgc cgctgtcggc cagcatcgtg ggtcagcgca tgtgggacgt
     1741 gctgacgcgt ggaacggacg aatacggcgt gctgggacat ggctggacct attcggccca
     1801 tccgatcggc gcggcggcgg gaatcgccaa cctgaagctg atcgaccacc
//
LOCUS       DTVW01000047            1072 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1092532, whole
            genome shotgun sequence.
ACCESSION   DTVW01000047 DTVW01000000
VERSION     DTVW01000047.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1072)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1072)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1072
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1092532"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..142
                     /locus_tag="EYO87_00630"
     CDS             <1..142
                     /locus_tag="EYO87_00630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005980258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate reductase"
                     /protein_id="HIC64509.1"
                     /translation="TPGERLVLRHLASDRAIFARGAIRAALWGQDKGPGQYDMADVLG
                     LT"
     gene            188..1003
                     /locus_tag="EYO87_00635"
     CDS             188..1003
                     /locus_tag="EYO87_00635"
                     /inference="COORDINATES: protein motif:HMM:TIGR03370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VPLPA-CTERM sorting domain-containing protein"
                     /protein_id="HIC64510.1"
                     /translation="MTAVPFASPTDCETLVNASVKPVFLVKLPPRGIPFCCIHLHRVA
                     YMRGRSRSIGLPQPFAYLVRVMKVLKVLAVAAALSPFAFAARAASVDVSLDYTVGKSV
                     SISHPEAVASSVKASAFHLTGSEGIGKFVAFCVDIATRLSLPSSYQVVGSNSTTAKLQ
                     NLFDANYRNVSTSNANQSAAFQLAIWKTIYNGFSWSGASRTVNSLTASYLSSAASYSG
                     DKIWRLTFLDGDKTQDLVTADMAPSPVPLPATALLLLGGLGGLGAFARKRRAD"
BASE COUNT          187 a          358 c          320 g          207 t
ORIGIN      
        1 cactccgggc gaacgtctgg tgctgcgcca tctggccagc gaccgcgcga tcttcgcccg
       61 cggcgcaatt cgtgcggcgc tgtggggcca ggacaagggg ccgggacaat acgacatggc
      121 cgatgttctg ggcctgacct gaagaccacc ctgcccgcga ctgattcggc gtcgcttcgc
      181 gccagaattg actgccgtcc cgttcgcctc acccaccgat tgcgagacct tggttaacgc
      241 cagcgtcaaa ccagtctttt tggtcaaatt gcccccgcgc ggcattccat tttgttgcat
      301 tcatctccac cgcgtcgctt acatgcgagg acgcagccga agtatcggat tgccacaacc
      361 ctttgcttac ttggtgagag ttatgaaagt tcttaaggtt ctggcggtcg cggccgctct
      421 ttcgcccttc gccttcgcgg cccgggcagc aagcgttgac gtgtcgctgg attacacggt
      481 cggcaagtcg gtttcgatca gccaccccga ggcggtggca agctcggtca aggcatcggc
      541 ctttcatctg accggctcgg aagggatcgg aaagttcgtc gcgttctgcg tggacatcgc
      601 gacccggctc agcctgccca gttcctatca ggtcgtcggc agcaacagca cgaccgccaa
      661 gctgcagaac ctgttcgatg cgaattaccg caatgtaagc accagcaatg ccaaccagtc
      721 ggccgccttt cagctggcga tctggaagac gatctacaac ggcttttcct ggagcggcgc
      781 cagcagaacg gtcaacagcc tgaccgccag ctacctgtcc agcgcggctt cttacagcgg
      841 cgacaagatt tggcgcctga ccttccttga cggcgacaag acgcaggatc tggtgaccgc
      901 cgacatggca ccctcgcccg ttccgctgcc ggccacggcg ctgctgctgc tgggcggcct
      961 cggtggtctg ggggccttcg cccgcaagcg gcgcgcagac tgaccgcgct gcgccgcccg
     1021 acagcgcatg gcacgaaaat ccgggaccgg tcgccaaggc tgccggtccc tg
//
LOCUS       DTVW01000048            1378 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1092755, whole
            genome shotgun sequence.
ACCESSION   DTVW01000048 DTVW01000000
VERSION     DTVW01000048.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1378)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1378)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1378
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1092755"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..128
                     /locus_tag="EYO87_00640"
     CDS             <1..128
                     /locus_tag="EYO87_00640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018302505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit alpha"
                     /protein_id="HIC64511.1"
                     /translation="LLDARGVISVTERQAYIGRVRALARACADLFLTTEAAGASA"
     gene            125..604
                     /locus_tag="EYO87_00645"
     CDS             125..604
                     /locus_tag="EYO87_00645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010393126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HIC64512.1"
                     /translation="MNWGRIATIGLALTALASGAGVWYAQQYGYYEPIDPASPDAAVP
                     IQTAEGPSRLNMTDFQAIDADSSPIRWRACFRIQGDLPADAVPFPAATPLNGPFWFDC
                     YDAARIGADLESGAARAFLSQSEIRPDVDRVLAIYPDGRAYGWQQFNDKTPERGVMD"
     gene            604..>1378
                     /locus_tag="EYO87_00650"
     CDS             604..>1378
                     /locus_tag="EYO87_00650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011746885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit beta"
                     /protein_id="HIC64513.1"
                     /translation="MPDLLIELFSEEIPARMQARARDDLKRLVTDGLVQAGLTYASAG
                     AFSTPRRLALTVEGLSAHSPDTREERKGPRTDAPEKALEGFLRGAGLTRDQLQVRDDK
                     KGQVWFAVIARKGRPASEIVAEVLETTIRDFPWLKSMRWGTGSLRWVRPLHSILCILS
                     DESGATTVPLNIDGIASGNSTRGHRFLSPDAFTVTGFDDYVARLRRAHVMLDPAEREA
                     EIRQQAENLAFARGWQIVPDDTLLSEVAGLVEWPVPLMGV"
BASE COUNT          218 a          484 c          452 g          224 t
ORIGIN      
        1 acctgctgga cgcgcgcggc gtcatttccg tgaccgagcg gcaggcctat atcggccgcg
       61 tccgcgcact ggcccgcgcc tgcgccgatc tgttcctgac gaccgaagca gcgggggcat
      121 cggcatgaac tggggcagga tcgcgacgat cgggcttgcg ctgacggccc tcgcctcggg
      181 ggccggggtc tggtatgcgc agcaatacgg ctattacgag ccgatcgatc cggccagccc
      241 ggatgcggcg gtgccgatcc agaccgccga gggaccgtcg cggctgaaca tgaccgattt
      301 tcaggccatc gacgccgata gttcaccgat ccgctggcgg gcctgtttcc ggatccaggg
      361 cgatctgccc gccgatgccg tgcccttccc ggccgccacg ccgctgaacg gcccgttctg
      421 gttcgactgc tacgacgccg cccggatcgg cgccgatctg gaatcgggtg ccgcaagggc
      481 atttctcagc cagtccgaga tccgtcccga tgtggaccgc gtgctggcga tctatcccga
      541 tggccgggcc tatggctggc agcaattcaa cgacaagacc ccggaacgcg gagtgatgga
      601 ctgatgcccg atctgctgat cgaactcttt tccgaggaaa tccccgccag gatgcaggcc
      661 cgcgcgcgcg atgatctgaa gcggctggtc accgacgggc tggtccaggc cgggctgacc
      721 tatgccagcg cgggcgcctt ttcgacgccc cggcgccttg ccctgaccgt cgaggggctc
      781 agcgcccaca gccccgacac gcgcgaggaa cgcaagggcc cccgcaccga cgcgcccgaa
      841 aaggcgctgg agggctttct gcgcggggcg ggcctgacgc gcgaccaatt gcaagtccgc
      901 gacgacaaga agggtcaggt ctggttcgcc gttatcgccc gcaagggccg cccggcatcc
      961 gagatcgtgg ccgaggttct ggaaaccacg atccgcgatt tcccctggct caaatccatg
     1021 cgttggggca cgggctctct gcgttgggtc cgcccgctgc attcgatcct ctgcatcctc
     1081 agcgacgaat ccggcgcgac caccgtgccg ctgaacatcg acggcatcgc gtccggcaac
     1141 agcacacgcg gtcaccgctt cctgtcgccc gacgccttca ccgtcaccgg cttcgatgac
     1201 tacgtcgcca ggctgcgccg cgcccatgtc atgctggacc cggccgagcg cgaggccgaa
     1261 atccgccagc aggccgagaa tctggccttc gcacgcggct ggcagatcgt ccccgatgat
     1321 acgctgctgt ccgaggtcgc gggcctcgtc gaatggccgg tgccgctgat gggcgtga
//
LOCUS       DTVW01000049            6339 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1095141, whole
            genome shotgun sequence.
ACCESSION   DTVW01000049 DTVW01000000
VERSION     DTVW01000049.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 6339)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6339)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6339
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1095141"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..453)
                     /locus_tag="EYO87_00655"
     CDS             complement(<1..453)
                     /locus_tag="EYO87_00655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008886957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HIC64514.1"
                     /translation="MAERIWIIGASGGIGRELALAYAREGADLILSARGRDKLAEVAA
                     EAGEAEILPLDVADRASIEAAAAAIAAGGKLDRIVHLAALYDPGRIADLDPEKAAQLV
                     TVNLTGSFHIAQVGPRLLRKHGQLALCGSVAGYVGLPQGQIYSATKAGV"
     gene            complement(446..1606)
                     /locus_tag="EYO87_00660"
     CDS             complement(446..1606)
                     /locus_tag="EYO87_00660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009176685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HIC64515.1"
                     /translation="MLFQRRLTREFLDTARKVRLGTLRVVTPEGEVHHFGGTAPGPEA
                     ALIVHDWRTIPALAAKGDIGMTEAYRDGWCDTPDLEALLTLALLNEDALERYIYGNRL
                     RMLALRALYVLNRNTRTGARRNISAHYDLGNDFYSLWLDPSMTYSSALFSDGDDLGAA
                     QQRKYDRIIDNLAGESGRLLEIGCGWGGFAERALSRGDFAPKGLTLSVEQAEYARRRL
                     DGNAEIALQDYRDESGRFDHVVSIEMFEAVGERYWRDYFGKLAQVLSQKGRAMVQTIT
                     VADRYFDRYRAGPDMIRSFIFPGGMLPSPTRFEAEARAVGLRIEETFNFGLDYARTLR
                     DWLARFDESLPRIREMGFDEGFIRVWRFYLAACAASFSVGRTDVIQYRMSHG"
     gene            complement(1626..2423)
                     /locus_tag="EYO87_00665"
     CDS             complement(1626..2423)
                     /locus_tag="EYO87_00665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009506978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1365 domain-containing protein"
                     /protein_id="HIC64516.1"
                     /translation="MTDLWDGALIPARIWHGRRGDVAREFRYRTTFLALPVDRIDAGD
                     LPLAIDRPGLWSLRRRDYGDRDGTSLRDFILGVLSDAGLAEAREVTLITAPRTSGYGF
                     NPVSFWLCRDDRQDLRAVLAEVSNTFGERHFYLCHRPDRGPIRREDRLGGEKIFHVSP
                     FLPREGRYLFRFDSGPGRFGAWVDWTSAEGSRQLGTSMVGPAQSLDRAALRRAALSHP
                     FQAQKVIGLIHWQAVKLRARGLRYLPKPPQRPGRRSEATGLDRDGEE"
     gene            complement(2420..3673)
                     /locus_tag="EYO87_00670"
     CDS             complement(2420..3673)
                     /locus_tag="EYO87_00670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009506977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amine oxidase"
                     /protein_id="HIC64517.1"
                     /translation="MIGSGISGLGTAWLLDSHHDVTLFEAEPRAGGHTRTVEAMGARV
                     DTGFIVCNRRTYPLFVPLLEHLGVALEPSDMTFSASFGNGRYEYGTGNTAALFAQRRR
                     AVDPRHLLMLRDILRFFRHATRFGASGHSLGAMLDELRLGADFRDMFLLPISGAIWST
                     PSRAMLDFPAASFVRFFDNHGLLSPSGQPNWLTVTGGARAYVDAILTRLKARVALAAP
                     VFRVIRDKEGVTVVSPHGPQRFDRAVFACHAPQALEMLDHPDAEERAVLSVFRTQPNR
                     MVLHSDPAFMPRRPAAWAAWNYITARRRPDPHQPVSLSYWMNRLQNLKTESPLIVTLN
                     PETEPRGIHDEALMAHPQFDTATMAAQVRLPSIQGRGGVYYAGAWTRYGFHEDGLLSA
                     LRVAQAMGIAWPLGQDPWADEAQAA"
     gene            complement(3859..4800)
                     /locus_tag="EYO87_00675"
     CDS             complement(3859..4800)
                     /locus_tag="EYO87_00675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011746675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ring-cleaving dioxygenase"
                     /protein_id="HIC64518.1"
                     /translation="MQLTGLHHLTAITADAPGNNRFYTRILGLRRVKKTVNQDNVSAY
                     HLFYADGAGNPGTDITFFDLPAAKDRRGTNSISLTGLRVAESGLDYWASRLRDSGVPH
                     GGVTLIDGRAGMDLEDHEGQRLRLIAAPDPEGTPWPDSPVPAEHRIHGLGPVTISVAE
                     LAPTEALLRTVMKMRRVRDYPAPDGAGQVHVFEMGAGGAAAELHVAVQPGLPRARLGA
                     GGVHHVAFRVPDKAALSGWAERLGAARVATSGEIDRFYFRSLYFREPAGNLFELATDG
                     PGFDADEPRDTMGTTLSLPPFLEDRRSQIEAGLKPLD"
     gene            4921..5103
                     /locus_tag="EYO87_00680"
     CDS             4921..5103
                     /locus_tag="EYO87_00680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010395408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64519.1"
                     /translation="MLVDPNAPFFRPLWVRVLCVILPLIWAVVELRSGAVFWAILFGA
                     AGLYLGFELFLRRKGD"
     gene            complement(5100..>6339)
                     /locus_tag="EYO87_00685"
     CDS             complement(5100..>6339)
                     /locus_tag="EYO87_00685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007255097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF3459 domain-containing protein"
                     /protein_id="HIC64520.1"
                     /translation="ADWYVWAEPNPDGTPPSNWPSVFGGPAWEWEPRRRQYYLHNFLI
                     QQPDLNFHHRPVQDALLDTMRFWLERGVDGFRLDTVNYYFHDDRLRDNPPNPDHDGPE
                     TYGYQRHIYSKNRPDNIAFLKRMRALTDEYDGRMMVGEVGDGGQTAIDIMAEYTAGND
                     RLHMCYSFEMLSPDFTAAHFRKTIEGVRKGAPDGHSCWSFSNHDVVRHVTRWAGHATD
                     PDALARQSAAMLLSFPGAISLYQGEELGQTETDLVYAELTDPPALRFWPEVRGRDGCR
                     TPMVWDRTQANAGFSTGIPWLPVKEPQAARAVAGQQADNDSVLAAYRTIIAFRKATPA
                     LRWGRTEFLELAEPILAFRRDHEGQAVTCVFNLSARPVRLKTDATALTGPSSAMLGEG
                     ILSLPANGFAWIEGAPGLSR"
BASE COUNT         1057 a         2105 c         2130 g         1047 t
ORIGIN      
        1 caccccggcc ttggtcgcgg aatagatctg gccctgcggc agcccgacat agcctgcgac
       61 cgatccgcac aatgccagct gaccgtgctt gcgcagcagc ctcggtccga cctgtgcgat
      121 gtgaaagctg ccggtcaggt tcacggtgac aagctgcgcg gccttctccg gatccagatc
      181 ggcgatccgt ccgggatcgt aaagcgccgc cagatgcacg atccggtcca gcttgccgcc
      241 cgcggcgatc gccgccgccg cggcctcgat cgaggcgcgg tcggccacgt cgagcggcag
      301 gatttcggcc tcgccggctt cggccgcgac ctctgccagc ttgtccctgc cgcgtgccga
      361 caggatcaga tccgcccctt cgcgggcata ggccagcgcc agttcgcggc cgatcccgcc
      421 gctggcgccg atgatccaga tccgttcagc catgggacat gcgatattga atgacatcgg
      481 tgcgcccgac gctgaacgac gcggcgcagg cggcaagata gaaacgccag acgcggatga
      541 atccctcgtc aaatcccatc tcgcggatcc ggggcaggct ttcgtcgaag cgggccagcc
      601 agtcgcgcag ggtacgcgca taatccagcc cgaagttgaa cgtctcctcg atacgcagcc
      661 cgaccgcccg cgcctcggcc tcgaaccggg tgggcgaggg cagcattcca ccgggaaaga
      721 tgaagctgcg gatcatgtcg ggtccggcgc gataacggtc gaaatagcgg tcggccacgg
      781 tgatcgtctg caccatcgcc cggcccttct gcgacaggac ctgcgccagc ttgccgaaat
      841 aatcgcgcca gtagcgttcg ccgaccgcct cgaacatctc gatcgagacg acatgatcga
      901 aacggccgct ttcgtcgcgg taatcctgca acgcgatctc ggcattgccg tccagcctgc
      961 gccgcgcgta ttcggcctgc tcgaccgaca gggtcaggcc cttgggcgcg aaatcgcccc
     1021 gcgacagggc gcgctcggca aagccgcccc agccgcagcc gatttccagc agccgccccg
     1081 attcgccggc cagattgtcg atgatgcgat cgtattttcg ctgctgcgcg gcgcccagat
     1141 catcgccatc gctgaacagc gccgaggaat aggtcatgct gggatccagc cacagcgaat
     1201 agaaatcgtt gcccagatcg taatgcgccg agatattgcg ccgcgccccg gttcgggtgt
     1261 tgcggttcag cacatataat gcccgcagcg ccagcatccg caggcggttg ccatagatat
     1321 accgctccag cgcgtcctcg ttcagcaatg ccagcgtcag caatgcctcg aggtcggggg
     1381 tgtcgcacca gccgtcgcga taggcctcgg tcatgccgat gtcgcccttg gcggccagcg
     1441 ccggaatggt gcgccaatca tgcacgatca gcgcggcctc cggccccgga gcggtgccgc
     1501 cgaaatgatg gacctcgccc tcgggcgtga cgacgcgcaa ggtgccgagc cgcaccttgc
     1561 gggcggtgtc aagaaattct cgtgtcaacc ggcgctgaaa caacatgaac gaccccccag
     1621 ttctttcatt cttccccgtc gcgatccaga ccggtcgcct ctgacctgcg gccgggacgc
     1681 tgcggcggtt ttggcagata acgaagtcca cgggcacgaa gtttcacggc ctgccagtgg
     1741 atcaggccta tcaccttctg cgcctggaaa ggatggctca gggcggcccg gcgcagtgcc
     1801 gcccggtcca gggattgcgc cggcccgacc atcgaggttc ccaattgccg gctgccctcc
     1861 gcgctggtcc aatccaccca ggcgccgaag cggcccggcc cgctgtcgaa gcgaaacaga
     1921 tagcgacctt cgcgcggcag gaacggcgag acgtggaaaa tcttttcgcc cccaagccgg
     1981 tcctcgcggc ggatcggccc ccggtcgggc cggtggcaca gatagaaatg ccgctcgccg
     2041 aaggtattgg atacctcggc cagcaccgcg cgcaggtcct gccggtcatc gcggcacagc
     2101 cagaagctga ccgggttgaa gccatagccc gacgtgcgcg gtgcggtgat cagtgtcacc
     2161 tcgcgcgcct cggccagtcc cgcatccgac agcaccccca ggatgaaatc gcgcagggat
     2221 gtgccgtcgc gatcaccgta atcccggcgc cgcagcgacc acaatccggg ccggtcgatg
     2281 gccagcggca gatcgcctgc atcgatccgg tccacgggca gcgccagaaa cgtggtgcga
     2341 tagcggaatt cgcgcgccac gtcgccgcgc ctgccgtgcc agatccgggc gggtatcagc
     2401 gcgccgtccc acagatccgt catgcggcct gcgcctcgtc ggcccagggg tcctgtccca
     2461 gaggccaggc gattcccatc gcctgcgcca cccgcagcgc cgacagcagt ccgtcctcgt
     2521 gaaagccgta tcgcgtccat gccccggcat aatagacccc gccgcgcccc tgaatcgagg
     2581 gcaaacgaac ctgcgccgcc atcgtggccg tatcgaattg cggatgcgcc atgagcgcct
     2641 cgtcatggat gccgcgcggc tcggtttccg gattcagggt cacgatcaga gggctttccg
     2701 ttttcaggtt ctgaagccgg ttcatccagt aggacaggct gaccggctgg tgcgggtcag
     2761 gccgtcgccg cgccgtgata tagttccagg cggcccaggc ggcggggcgt cgcggcatga
     2821 aggccggatc gctgtgcagc accatccggt tgggctgcgt gcgaaacacc gacaggacgg
     2881 cccgctcctc ggcgtcggga tgatccagca tctccagcgc ctgcggggcg tggcaggcaa
     2941 agaccgcgcg gtcgaaacgc tggggcccgt gggggctgac gacggtgacg ccctccttgt
     3001 cccggatcac gcggaaaacc ggcgcggcca gcgcgacgcg cgccttcagc cgtgtcagga
     3061 tcgcatcgac ataggcccgc gcgccgccgg tcacggtcag ccagttcggc tgccccgatg
     3121 gcgacagcag accgtgattg tcgaagaacc gcacgaagct ggcggccggg aaatccagca
     3181 tggcgcgcga gggggtggac cagatcgccc ccgagattgg cagcaggaac atgtcgcgga
     3241 aatccgcgcc cagccgcaat tcatccagca tcgcgcccag cgaatgaccg ctggcgccaa
     3301 agcgcgtcgc gtggcggaag aaacgcagga tgtcgcgcag catcagcagg tggcgcggat
     3361 cgacggcccg ccgcctctgc gcgaacaggg ccgcggtgtt gccggtgccg tattcgtagc
     3421 ggccattccc gaaactggcc gagaaggtca tgtccgacgg ctccagcgcc acccccagat
     3481 gttccagcaa aggcacgaac agcggatagg tgcggcggtt gcagacgatg aagccggtat
     3541 cgacgcgggc gcccatcgcc tcgaccgtgc gggtatggcc gccggcacga ggctcggcct
     3601 cgaaaagggt cacgtcatga tgcgaatcca gaagccacgc ggtgccaagc ccggatatgc
     3661 cgctgccgat cacggcgata cggcggcggg ggcccggcag ggccggccgg gcttcgcggg
     3721 gatgggcaag tctggtcacg aggcttctcc tgctgtcgga accagacacg gctgccggtg
     3781 cgaaaatggt gcaaggcgcg cagattttgc gatccgtcgc aaagcggccc tgcgcgcgac
     3841 gatccggatt ttccggcctc agtccagcgg cttcaggccg gcctcgatct gtgaccggcg
     3901 atcttccagg aacggcggca gcgacagcgt cgtgcccatc gtgtcgcgcg gctcgtcggc
     3961 atcgaagccc ggtccgtcgg tggcaagttc gaacaggttg cccgccggct cgcggaaata
     4021 gagcgaacgg aaatagaagc ggtcgatctc gcccgacgtg gcgacgcggg cggcgccgag
     4081 acgttcggcc cagccgctta gcgcagcctt gtcgggcacg cggaaggcca cgtgatgcac
     4141 gccgcccgcg ccaagccgtg cccggggcag gccgggctgg acggcgacat gcagttccgc
     4201 cgccgccccg cccgccccca tctcgaagac atggacctgc cccgcgccgt cgggggcggg
     4261 atagtcgcgg acgcggcgca tcttcatcac tgttctcagc agggcttcgg tcggggccag
     4321 ttcggccacc gagatcgtga ccggccccag gccgtggatg cggtgctcgg ccggaaccgg
     4381 gctgtcgggc cagggcgtgc cctcggggtc gggcgcggcg atcagtcgca ggcgctggcc
     4441 ttcgtgatct tccagatcca tccctgcgcg gccgtcgatc agggtgacgc caccatgcgg
     4501 gacaccgctg tcgcgcagcc gcgaggccca gtaatccaga cccgattcgg ccacgcgcag
     4561 gccggtcagg ctgatcgaat tggtgccgcg ccggtctttt gcggccggta gatcgaaaaa
     4621 ggtgatgtcg gttcccggat tgcccgcgcc gtcggcgtaa aacagatgat aggccgagac
     4681 attgtcctga ttgaccgtct tcttgacccg gcgcaggccc aggatccggg tgtagaagcg
     4741 gttgttgccg ggcgcgtcgg cggtgattgc cgtcagatgg tgaagtccgg tcagttgcat
     4801 gggctattcc tcgggttttc tctctggcgc cctgtctggc ggccgggggc ttgtccgcgc
     4861 cgggcgaagg gcacaggatg gtccggccgc gatgaaacag cgtcgggcaa gggggtgatc
     4921 atgctggtgg atccgaatgc gccgttcttc cggccgctct gggtgcgtgt cctctgtgtc
     4981 attctgccgc tgatctgggc ggtggtcgag ctgcggtcgg gcgcagtgtt ctgggcgatc
     5041 ctgttcggcg cggcggggtt gtatcttggg ttcgaattgt tcctgcgccg caagggcgat
     5101 tagcgggata accccggggc gccctcgatc caggcaaaac cgttggcggg cagcgacagg
     5161 atcccctcgc ccagcatggc cgaggatgga ccggtcaggg ccgtggcgtc ggttttcagc
     5221 cgaaccggcc ttgccgacag gttgaagaca catgtcacgg cctgtccctc gtgatcgcgg
     5281 cggaaggcaa ggatcggctc ggccagctcc agaaactcgg tcctgcccca tcgcagcgcc
     5341 ggcgtggcct tgcgaaacgc gatgatcgtg cgataggcgg ccagcacgct gtcattgtcg
     5401 gcctgctggc ccgcgactgc gcgcgcggcc tgcggttcct tgaccggcag ccaggggatc
     5461 ccggtcgaga agcccgcatt ggcctgcgtc ctgtcccaga ccatcggcgt gcggcagccg
     5521 tcgcgtcccc tgacctcggg ccagaaacgc agcgccgggg ggtcggtcag ttcggcatag
     5581 accagatcgg tttcggtctg gcccagttcc tcgccctgat aaaggctgat cgcgccggga
     5641 aacgacagca gcatcgccgc cgattgccgg gccagcgcgt cggggtcggt ggcatggccg
     5701 gcccagcggg tgacgtggcg aaccacgtca tggttcgaga aggaccagca ggaatgaccg
     5761 tcgggggcgc ctttgcggac gccctcgatc gtcttgcgga aatgcgccgc ggtgaagtcg
     5821 gggctgagca tctcgaagct gtagcacatg tgcagccggt cgtttccggc ggtgtattcg
     5881 gccatgatgt cgatggcggt ctggccgcca tcgccgacct cgcccaccat catgcggccg
     5941 tcatattcgt cggtcagcgc ccgcatccgt ttcaggaagg cgatgttgtc gggccggttc
     6001 ttggaataga tgtggcgttg atagccatag gtttcgggcc cgtcatggtc gggattgggc
     6061 gggttgtcgc gcaacctgtc gtcgtggaaa taatagttca ccgtatccag ccgaaatccg
     6121 tccacgcctc gttccagcca gaaacgcatc gtgtccagca gcgcgtcctg caccggcctg
     6181 tggtggaaat tcagatccgg ctgctggatc aggaaattgt gcaggtaata ctggcgccgt
     6241 cgcggctccc attcccaggc cgggccgccg aagaccgagg gccagttgct gggcggcgtg
     6301 ccgtccgggt ttggttccgc ccagacatac cagtcggcc
//
LOCUS       DTVW01000050            1296 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1095413, whole
            genome shotgun sequence.
ACCESSION   DTVW01000050 DTVW01000000
VERSION     DTVW01000050.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1296)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1296)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1296
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1095413"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..577)
                     /locus_tag="EYO87_00690"
     CDS             complement(<1..577)
                     /locus_tag="EYO87_00690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009504564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylacetate--CoA ligase family protein"
                     /protein_id="HIC64521.1"
                     /translation="MEMSDDIYKDIAQAYAAAAEKAPGLKSRFTAAGFDPAAVTSVAD
                     LSRLPVMKKEELLKIQRENPPFGGFLASDLKDIGRIYVSPGPIFEPALSGEGGHGLDL
                     LFKAAGVGPGDIILNTWMYHLVPAGLLFDEAAQAAGATVIPGGVGNTELQAQIIVETG
                     VTSICASTAFFLTLADKVIETYGRDAWKVKTA"
     gene            complement(599..>1296)
                     /locus_tag="EYO87_00695"
     CDS             complement(599..>1296)
                     /locus_tag="EYO87_00695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009504563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HIC64522.1"
                     /translation="SIQMTDMWIDIDRDPDINAVIVTGAGKAFSAGGDFSLIEKMIGD
                     SHEIMKTWKEAKDLVYNIINCNKPIISAINGPAAGAGLVVAILADISIAGKRAKIVDG
                     HPRLGVAAGDVAAIIWPLLTSMAKAKYYLMTCKPVSGEEAERIGLVSMCVEDDELQQI
                     ALDTAVELANGSQSAIRWTKYSLNNWLRQAGPIFDASTALEMLGFMSEDVKEGVLSHR
                     EKRAPNFRKDCPL"
BASE COUNT          256 a          409 c          360 g          271 t
ORIGIN      
        1 aggctgtctt caccttccat gcgtcgcggc cataggtttc gatcaccttg tccgccagcg
       61 tcaggaaaaa cgcggtcgag gcgcagatcg aagtcacgcc ggtttcgacg atgatctgcg
      121 cctgaagctc ggtattgccc acgccgccgg gaatcaccgt ggcacctgcg gcctgtgccg
      181 cttcgtcgaa cagcaagcct gcgggcacaa gatgatacat ccaggtgttc aggatgatat
      241 cccccggccc cacgcctgcc gccttgaaaa gcaggtccag gccatgacct ccctcgcccg
      301 aaagggccgg ctcgaaaatt gggccagggg acacgtagat ccgtccaata tccttcagat
      361 ccgaggcaag gaatccgccg aaaggcgggt tctcgcgctg gatcttcaga agctcttctt
      421 ttttcatcac tggaagtcgc gagaggtccg ccaccgatgt gacggctgcc ggatcgaatc
      481 cggcagccgt aaatcgcgat ttcaggccag gagctttttc ggccgcagcg gcataggctt
      541 gcgctatatc tttgtagata tcatcagaca tttccatgcc tcctcgtcca atcgggcgtt
      601 aaagcgggca gtccttgcgg aagtttggcg cgcgcttctc gcggtgcgac aacacacctt
      661 ccttgacgtc ctcgctcata aaaccaagca tctccagcgc ggtcgacgca tcaaagatcg
      721 gcccggcctg gcgcagccag ttgttcagcg aatacttggt ccagcggatc gcgctttgcg
      781 agccgttggc cagttcgaca gccgtgtcca aagcgatctg ctgaagctcg tcatcctcga
      841 cgcacattga caccagaccg atgcgctcgg cctcttcgcc cgacaccggc ttgcaggtca
      901 tcagatagta tttcgccttg gccatcgagg tcagcagcgg ccagataatc gccgcgacat
      961 cgccagcggc aacgcccaga cgcggatgac catcgacaat ctttgcccgt ttcccggcga
     1021 tcgagatgtc ggccaggatg gcaaccacaa ggcccgcgcc tgccgcaggg ccattgatcg
     1081 cggaaatgat cggcttgttg cagttgatga tgttgtagac gagatccttg gcttctttcc
     1141 acgtcttcat gatctcgtgc gagtcgccga tcatcttctc aatcaggctg aaatcgccgc
     1201 ccgccgaaaa cgccttgccc gcgccggtca cgatgaccgc gttgatgtcg gggtcgcggt
     1261 cgatgtcgat ccacatgtcc gtcatctgga tcgaca
//
LOCUS       DTVW01000051            1178 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1095882, whole
            genome shotgun sequence.
ACCESSION   DTVW01000051 DTVW01000000
VERSION     DTVW01000051.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1178)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1178)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1178
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1095882"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..569)
                     /locus_tag="EYO87_00700"
     CDS             complement(<1..569)
                     /locus_tag="EYO87_00700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011841091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxythreonine-4-phosphate dehydrogenase"
                     /protein_id="HIC64523.1"
                     /translation="MPGRIILTCGEPAGIGPELAPLALASGVDFAWMGDPRHLPDGTA
                     WTQIAAPSDTVPDGHLPVLRHDFPALARPGRPDPANAAGVIAVIAQAVALVMRGEAAG
                     LTTLPISKQALRDGAGFAFPGHTEYLADLAGGMPVAMMLASTTVAPPCRVVPATIHIP
                     LEQVPEALTDAALEQAIRITHAAMIRDFG"
BASE COUNT          175 a          407 c          430 g          166 t
ORIGIN      
        1 atgccgaaat cgcgaatcat cgcggcgtgg gtgatgcgga tcgcctgttc cagcgccgca
       61 tcggtcagcg cctcgggcac ctgttccagg gggatgtgga tcgtcgcggg cacgacacgg
      121 cagggcggcg ccaccgtcgt cgaggccaac atcatcgcca ccggcatgcc gcccgccaga
      181 tcggccagat attcggtatg gccgggaaag gcaaagcccg cgccatccct cagcgcctgt
      241 ttgctgatcg gcagggtggt gagccccgcc gcctcgccgc gcatgaccag ggccacggcc
      301 tgcgcgatca ccgcgatcac gccggccgca ttggccggat cggggcggcc gggacgggcg
      361 agggcgggga aatcgtggcg cagcaccggc agatggccat cgggcaccgt gtcggagggg
      421 gcggcgatct gggtccatgc ggtgccgtcg ggcagatggc gcggatcgcc catccaggcg
      481 aaatcgacgc ctgaagccag agccagcggc gccagttccg ggccgatccc ggcaggttcg
      541 ccacaggtca ggatgatccg ccccggcatc gtctcagggc cgccggatca ccgcatcggc
      601 gcggagttcc gccagatagg cctcggcggc ctcgttggcc ttgcggttga aaagatcctc
      661 gcgcagggtt tcgcggctgg gcaggccgcc gagggtcggg accgcgttct cgaccccgtc
      721 ggcgggtcgc gcggtgaccg gcacatcggg tccggtgtct gccagaagcg cgggctggcg
      781 cgaacacagc atgaccagat cggccgcgcc gccgtagctc accaccgctg cctcgtccgg
      841 gtcgagagag gcgagccgcg tcgcgatcag cgtgggaatc cggttctgcg aagcggtctg
      901 cctggcaatt tgcgcaccgg cctgcggccc cgcctggacg tagagatcgt cgcaggaccg
      961 ggtccgggcc gccagcgtcg ccgcctcgct ggccgaaccc atccgcagcg tcatgtagtc
     1021 cagcacctgt tcacgcgcgc cggggcgcag cgtgccctgc gtgtcgcgca gcaggaacag
     1081 caccacggcg ccctgcaccg tcagcggccg gctgacctgt cccggttgca gcgcggtcac
     1141 gatcgggcgc aggctgggtg gcagattgtc cagcgcga
//
LOCUS       DTVW01000052            3548 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1096069, whole
            genome shotgun sequence.
ACCESSION   DTVW01000052 DTVW01000000
VERSION     DTVW01000052.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3548)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3548)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3548
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1096069"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..508)
                     /locus_tag="EYO87_00705"
     CDS             complement(<1..508)
                     /locus_tag="EYO87_00705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018000033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HIC64524.1"
                     /translation="MIEMQDVGFGYRGGPALLSNMTLSLQPGMFHFLTGPSGAGKTTL
                     LRMLYADLLPTSGRITAFGADIGSLGRDDIAHLRRRVGVVHQDAQFLDHLPVAENVAL
                     PLSVAGQNVEIEALRDLLGWVQLAQQARSLPPSLSGGERQRASLARAVILSPDLTANW
                     TFIRPTTLS"
     gene            605..1369
                     /locus_tag="EYO87_00710"
     CDS             605..1369
                     /locus_tag="EYO87_00710"
                     /inference="COORDINATES: protein motif:HMM:TIGR02098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64525.1"
                     /translation="MAEIRLICPGCDAEYRIPEKAIPPEGREVECSDCGRVWHGERPA
                     RTAEPMDLSRFSVAESEAPVPQARVQPPRRRVPDNVLSILREEVEHERRARFHEDGLE
                     SRPAAAQEPAGAGPGAAERGDPDWPATTVTAVQRNATADPAAQIPAARSAQDIPTIAT
                     APATAAPEVTKSSAATADGRPQPAVQANPTQPRRSGYGMGFGLSAMIAASVVALYLLA
                     PPMADAGPFGAFLMDLREGLDQARLWLQDRASALFA"
     gene            complement(1397..>3548)
                     /locus_tag="EYO87_00715"
     CDS             complement(1397..>3548)
                     /locus_tag="EYO87_00715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF4175 family protein"
                     /protein_id="HIC64526.1"
                     /translation="GALWRAHLVQMQARAEAARAVRPDADLARRDPFALRLAAMVALA
                     MALIFGGAGQMGQGISAIAATMGRPLANAPGDPAGTSWEGWAEPPRYTRRPTIYLNAL
                     REGEVLELPKGSAVTFRLYGEGASVTQDIGPAVSDDGQAPGFRAERSGAITVAGRRFD
                     VTVLPDRAPVIRAGAAPTRRADGRLIQEFQARDDNGVVSGQARIALDLASVDRRFGLA
                     VDPEPRDPIELQLPLPRSGDRREIRGQLVEDLARHPWANLPVTLTLEAVDGIEQAGLS
                     QPLQTLLPGKRFFNPLAAALIEIRRDLLWSRENAGRSAEILRAVTWQPQGFVDQTLYQ
                     ELQRAIGMLESGDLSAQDRDKLAEALWKAAMLLEDGGLSDALERMKQAQEKLSEAIRN
                     GASKDEIQRLMDELKDATDAYTQMLAEQGQQDQSDRFAQNQQGQQITGDQIQQMMDEI
                     QRLMNEGRMAEAQQLLEQFNRMMENLQVTQGQGGSGSGQQGQGNRSMNRLADTLRQQQ
                     RLSDEAFRDMQEQFGQGQSGQPSQNSQDFADRQRGLREELGQQRGMLPGQGLEQGDEA
                     RRQLDEAGRAMDDAEQALRDGDTGGALQRQADAIQSLREGMRALGDMLNQDSGQQAGE
                     GQQQGGQQAGAQDGQGQQPGGGMRSEGRPMLDPLGRQRSGNGNVVTSGDPLAEGLDPA
                     KRARDLLDEIRRRSGDRQRPQDERDYLGRLLDRF"
BASE COUNT          548 a         1304 c         1130 g          566 t
ORIGIN      
        1 cgctcaatgt cgtcggcctg atgaacgtcc agtttgcggt caagtcgggc gacaggatca
       61 ccgcgcgcgc caacgacgcc cgctgccgtt cgccccccga cagcgacggc ggcagcgacc
      121 gcgcctgctg ggcaagctgc acccagccca gaagatcgcg cagggcctcg atctcgacat
      181 tctggccggc gacgctcagc ggcagggcaa cgttttcggc caccggcagg tgatcaagaa
      241 attgtgcatc ctgatgcacc acgccgacgc gccggcgcag atgggcgatg tcgtcgcgcc
      301 cgaggctgcc gatatcggcg ccaaaggccg tgatccgtcc cgaagtcggc aaaagatcgg
      361 catagagcat ccgcagcaag gtcgtcttcc ccgcgccgga cgggccggtc aggaaatgga
      421 acatgcccgg ctgcaggctc agcgtcatgt tcgacaacag cgcaggccct ccgcgatagc
      481 cgaagccgac atcctgcatc tcgatcaagc gccaccccca ttcgttaccg ggatcctgct
      541 ccggccgctt ggaagccgga cccgcgcttg atagaacagc gacaaggcga atgcgagggt
      601 cggcatggcg gaaataaggt tgatctgtcc gggctgcgat gcggaatacc gcatccccga
      661 aaaggcgatt ccccccgaag gccgcgaggt cgaatgcagc gattgcggca gggtctggca
      721 tggcgaacgt ccggcgcgga ccgccgagcc gatggatctg agccgtttca gcgtggccga
      781 atccgaggca ccggttccgc aagcccgcgt ccagccaccg cgccgccgcg tgcccgacaa
      841 cgtgctgtct atcctgcgcg aggaggtgga acacgaacgc cgcgcccgct ttcacgagga
      901 cggcttagaa agccggccgg cagccgcgca ggaaccggca ggcgccggac ctggcgccgc
      961 cgaacgcggc gatccggatt ggcccgcgac gacggtgacg gccgttcaac gcaacgccac
     1021 agccgacccg gccgcacaaa tcccggcggc gcgatccgcg caggacatac cgacaatcgc
     1081 gacggccccc gccaccgctg ccccggaagt cacgaaaagc agcgccgcga cggccgatgg
     1141 acggccacaa ccggccgtgc aggcgaaccc gacacagccg cgtcgttcgg gctatggcat
     1201 ggggttcggg ctttcggcga tgatcgcggc ctcggtcgtc gcgctttacc tgttggcacc
     1261 gccgatggcg gatgccggtc ccttcggcgc ctttctgatg gatctccgcg agggcctgga
     1321 tcaggcgcgg ctgtggctgc aggatcgggc aagcgcgctg ttcgcctgat ccgcttggcc
     1381 caaaccacgc gcgggctcag aaccggtcca gcaggcggcc cagatagtcg cgttcgtcct
     1441 gcggccgctg acggtcgccg ctgcggcgcc ggatttcatc cagaaggtca cgggcgcgtt
     1501 tcgccggatc cagcccctcg gccagagggt cgcccgaggt gacgacgttg ccgttgcccg
     1561 accgctgtcg cccaagcggg tccagcatcg gccggccttc gctgcgcatc ccgcctcccg
     1621 gctgttgtcc ctgaccatcc tgcgcgccgg cctgctgccc gccctgctgc tgaccctcgc
     1681 cggcctgttg cccgctgtcc tggttcagca tgtcgccaag cgcccgcatc ccctcgcgca
     1741 gcgactggat cgcatcggcc tgacgctgca aggcgccgcc ggtatcgcca tcacgcagcg
     1801 cctgttcggc gtcatccatc gcgcgcccgg cctcgtccag ttgccgccgg gcttcgtccc
     1861 cctgctccag tccctgcccc ggcagcatcc cgcgctgctg gcccaattcc tcccgcaggc
     1921 ccctctgacg gtcggcgaaa tcctgcgaat tctgcgacgg ctggccgctc tggccctgac
     1981 cgaattgttc ctgcatgtcg cggaacgcct cgtccgacag gcgctgctgt tgccgcaggg
     2041 tatcggcgag acgattcatc gaccggttgc cctgaccctg ctggccgctg ccgctgccgc
     2101 cctgcccctg ggtgacctga aggttctcca tcatccggtt gaactgttcc agaagctgct
     2161 gcgcctcggc catccggccc tcgttcatca ggcgctggat ttcgtccatc atctgctgga
     2221 tctgatcgcc ggtgatctgc tggccctgct ggttctgggc aaagcggtcc gactggtcct
     2281 gctggccctg ttcggccagc atctgggtat aggcgtcggt cgcgtccttc aattcgtcca
     2341 tcagccgctg aatctcgtcc ttgctggcac cgttgcgaat cgcctcggac agcttttcct
     2401 gcgcctgctt catccgttcg agcgcatccg acagcccgcc atcttccagc agcatcgccg
     2461 ccttccacaa cgcctcggcc agcttgtcgc ggtcctgcgc cgacagatcg cctgattcga
     2521 gcatgccgat ggcgcgctgc aattcctgat acagggtctg atcgacaaag ccctgcggct
     2581 gccaggtgac cgcccgcagg atctcggcgc tgcggcccgc attttcacgc gaccacagaa
     2641 ggtcgcgccg aatctcgatc agggcggcgg ccagcgggtt gaagaaccgc ttgcccggca
     2701 gcagggtttg caacggctgg gacaggccgg cctgctcgat cccgtccacc gcctccagcg
     2761 tcagcgtgac cggcaggttc gcccaggggt gccgggccag gtcctcgacc agttgccccc
     2821 ggatctcacg ccggtcgccc gaccgcggca gcggaagctg caattcgatc ggatcgcgcg
     2881 gctcgggatc gacggcaaga ccgaagcggc gatcgaccga ggccaggtcc agtgcgatcc
     2941 gcgcctgacc cgagacgacg ccgttgtcgt ccctggcctg gaattcctgg atcaggcggc
     3001 catccgcgcg tcgcgtgggc gccgccccgg cccggatcac cggcgcgcgg tcgggcagga
     3061 cggtcacgtc aaagcgacgt ccggcgaccg tgatcgcgcc cgaccgttcg gcccggaaac
     3121 ccggcgcctg tccatcatcc gaaacggcag gcccgatatc ctgcgtcacc gaggcgccct
     3181 cgccatagag gcggaaggtg acggcgctgc ctttgggcag ttccagcacc tctccctcgc
     3241 gaagcgcgtt cagatagatc gttggacggc gggtatagcg cggcggctcg gcccagcctt
     3301 cccaggacgt tcctgccggg tcgcccggcg cattggccag cggccgcccc atcgtcgccg
     3361 cgatcgcgct gatcccctgt cccatctggc cggcgccgcc aaagatcagc gccatggcca
     3421 gcgccaccat cgccgccagg cgcagcgcga aaggatcgcg acgggccaga tcggcgtcgg
     3481 ggcgcacggc ccgcgccgcc tcggcccgcg cctgcatctg caccaaatgc gcccgccaca
     3541 aggccccc
//
LOCUS       DTVW01000053            1243 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1096797, whole
            genome shotgun sequence.
ACCESSION   DTVW01000053 DTVW01000000
VERSION     DTVW01000053.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1243)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1243)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1243
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1096797"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1084)
                     /locus_tag="EYO87_00720"
     CDS             complement(<1..1084)
                     /locus_tag="EYO87_00720"
                     /EC_number="2.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011048618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acetyltransferase"
                     /protein_id="HIC64527.1"
                     /translation="MTDAFIYDAARTPRGKGRADGSLHEVTSLALSARLLNAVKQRNN
                     LEGHAVEDLIWGNVTQVKEQGGCLARSVVLASDLDESIPGLSINRFCASGMEAVNLAA
                     NQIRGGAGSGYLAGGVEMMGRVGMGSDGAAIAVDPGLAMKSYFVPQGISADIIATEYG
                     FTREDADALAAESQRRASRAWEEGRFDRSIVPVLDQNGLTILDRDEYMRPGTKAEDLA
                     RLKPSFKDMGETMPGFDRVAMLKYPHLDHIEHIHHAGNSSGIVDGAAAVLIGNEDFGK
                     AWGLKPRARIRATAKVGTDPTIMLTGPVPVTEKILRDSGLSIGDIDLFEVNEAFSAVV
                     LRFMQAFQISPDRVNVNGGAIAMGHPL"
     gene            complement(1081..>1243)
                     /locus_tag="EYO87_00725"
     CDS             complement(1081..>1243)
                     /locus_tag="EYO87_00725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010394048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glutathione S-transferase"
                     /protein_id="HIC64528.1"
                     /translation="CGYLFYPEPFGFVRGDWPNIDRWLDGISALPGWKSPYDLMPGNP
                     SDRAPKEDT"
BASE COUNT          203 a          408 c          402 g          230 t
ORIGIN      
        1 ccagcgggtg gcccatggca atggcgccgc cgttgacgtt caccctgtcg gggctgatct
       61 ggaacgcctg catgaagcgc aggacaacgg ccgagaaggc ctcgttcacc tcgaacaggt
      121 cgatatcgcc gatcgacagg ccgctgtcgc gcaggatctt ttcggtcacc ggcaccggcc
      181 cggtcagcat gatcgtggga tcggtgccga ccttggcggt ggcacgaatg cgggcgcggg
      241 gtttcaggcc ccatgccttg ccgaaatcct cgtttccgat cagcaccgcg gcggcgccgt
      301 ccacgatgcc gctgctgttt ccggcatggt gaatatgctc gatatgatcc agatgcggat
      361 atttcagcat cgccacccgg tcgaagccgg gcatcgtctc gcccatgtcc ttgaaactgg
      421 gtttcagcct ggccagatcc tcggccttgg tcccgggccg catgtattcg tcgcgatcca
      481 ggatggtcag cccgttctga tccagaaccg gcacgatcga gcggtcgaac cggccctcct
      541 cccacgcccg tgacgcgcgg cgctggcttt cggcggccag tgcgtcggca tcctcgcggg
      601 taaagccgta ttcggtggcg atgatatcgg cactgatgcc ttgcgggacg aaatagcttt
      661 tcatggccag gccgggatcg accgcgatgg cggcaccatc gctgcccatg cccacgcggc
      721 ccatcatttc cacgccaccg gcgagatacc cgctgcccgc gccgccgcgg atctggttgg
      781 cggccaggtt caccgcctcc atgccgctgg cgcagaagcg attgatcgac aggccgggga
      841 tggattcgtc cagatccgag gccagaacga cgcttcgggc cagacagccc ccctgctcct
      901 tgacctgcgt gacattgccc cagatcaggt cctcgaccgc gtggccttcc aggttgttgc
      961 gctgcttgac ggcgttcagc agccgcgcgg acaaggccag cgaggtgacc tcgtgcaggc
     1021 tgccatcggc tcgacccttg ccgcgcgggg tgcgggcggc atcatagatg aatgcgtcgg
     1081 tcatgtatcc tccttgggcg cccggtccga agggtttccg ggcatcaggt cataggggct
     1141 tttccagccg ggcagggcgg agatgccgtc cagccagcgg tcgatatttg gccagtcgcc
     1201 gcgcacgaag ccaaaaggct cggggtagaa cagatagccg cag
//
LOCUS       DTVW01000054            1191 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1098892, whole
            genome shotgun sequence.
ACCESSION   DTVW01000054 DTVW01000000
VERSION     DTVW01000054.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1191)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1191)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1191
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1098892"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..637)
                     /locus_tag="EYO87_00730"
     CDS             complement(<1..637)
                     /locus_tag="EYO87_00730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018237439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NCS2 family permease"
                     /protein_id="HIC64529.1"
                     /translation="MAAGRAAGRIIMERLFKLTETGSNIRTEIIAGLTTFLTMAYIIF
                     VNPDILSSTGMDRDAVFVATCLAAAIGSLVMGLWANWPIGMAPGMGLNAFFAFTVVGA
                     MGFTWQQALGAVFISGLIFLFLSVTGIRRWLIGGIPVSMRSAIAAGIGLFLAIIAMKS
                     SGIVVASPATFVTLGDLTQAGTLLTIAGFFIIAALDALKVPGAILIGILLVT"
     gene            821..>1191
                     /locus_tag="EYO87_00735"
     CDS             821..>1191
                     /locus_tag="EYO87_00735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="chitin deacetylase"
                     /protein_id="HIC64530.1"
                     /translation="MRYSRDLRGYGETPPDPQWPGGARLAVNFVINYEEGSEGSIFDG
                     EDRTETGLTESSSVEFAPGARNLGAESMFEYGSRVGFWRLMRLFAAHEMPVTIFGCAL
                     ALERNPEAVAAIRAAAHDVCC"
BASE COUNT          238 a          363 c          394 g          196 t
ORIGIN      
        1 cggtgacaag caggatcccg atcaggatcg cgcccggaac cttcagtgca tccagtgccg
       61 cgatgatgaa gaagcccgcg atggtcagca gcgtgcccgc ctgggtcaga tcgcccagcg
      121 tcacgaaggt cgccgggctg gccaccacga tacccgagga tttcatcgcg atgatcgcca
      181 ggaacagccc gatgccggcg gcgatggcgc tgcgcatgga caccggaatc ccgccgatca
      241 gccagcgccg gatcccggtc accgacagga acaggaagat caggcccgag atgaagaccg
      301 cgcccagggc ctgctgccag gtgaacccca tcgcgccgac gacggtgaag gcgaagaagg
      361 cgttcagccc catgcccggc gccatgccga tgggccagtt ggcccaaagc cccatgacca
      421 gcgacccgat cgccgcggcc aggcaggttg ccacgaagac cgcgtcgcga tccatgccgg
      481 tcgaggacag gatgtcggga ttgacgaaga tgatataggc catcgtcaga aaggtggtca
      541 ggcccgcaat gatctcggtg cggatattgc tgccggtttc ggtcagcttg aatagtcgtt
      601 ccatgatgat cctccccgcg gctctccccg ccgccatcga cgcggattgt atgggtcggg
      661 gaaatggctt cacaatcgcg cccggcccgc aagtctttca atgcgggatt gaaagcgccg
      721 cgatctttgt cgattcgttg atacagaatt tcggacttgc cgacttgccc ggcgcggccc
      781 ggacgggtct tgtgaaacca gccaagggaa ggacatcacg atgcgctaca gccgcgacct
      841 gcgaggatat ggcgaaaccc cacccgatcc gcaatggccg ggcggcgcgc ggctggcggt
      901 caatttcgtg atcaattacg aggaaggctc ggaaggctcg atcttcgacg gcgaggatcg
      961 gaccgaaacc ggcctgaccg aaagttccag tgtcgaattt gcgccgggcg cacgaaatct
     1021 gggcgccgag tcgatgttcg aatatggcag ccgggtcggg ttctggcggc tgatgcggct
     1081 gttcgcggcg cacgagatgc cggtaacgat tttcggatgc gcgttggcgc tggaacgcaa
     1141 tcccgaagcg gtggcggcga ttcgcgcggc ggcgcacgat gtctgctgcc a
//
LOCUS       DTVW01000055            1645 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1100486, whole
            genome shotgun sequence.
ACCESSION   DTVW01000055 DTVW01000000
VERSION     DTVW01000055.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1645)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1645)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1645
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1100486"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..654
                     /locus_tag="EYO87_00740"
     CDS             <1..654
                     /locus_tag="EYO87_00740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007803484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family transposase"
                     /protein_id="HIC64531.1"
                     /translation="HLKGSGKLFMDETTAPVLEPGRGRTKTGFLWALARDDRGWGGDD
                     PPGVVFTYRPSRAGVNAEQILQGFDGILQLDGYPGYDRLTRPSRKGGAPITVAHCWAH
                     ARRKLKEVFDRDGSEIAAEGLRRIAEFYRIETEIRGMGPGQRLSARQTRTAPLVAQFG
                     EWLQSQRRRISAKSRLGEKLAYIHRQWDGLQTFLQDGRVEIDSNAVENLIRPIEVAR"
     gene            724..1645
                     /locus_tag="EYO87_00745"
                     /pseudo
     CDS             724..1645
                     /locus_tag="EYO87_00745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611153.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
BASE COUNT          354 a          468 c          541 g          282 t
ORIGIN      
        1 cacctgaagg gctcgggcaa actcttcatg gacgaaacga cggcgccggt tctggagccc
       61 gggcgaggca ggacgaagac tggcttcctc tgggcgctgg cccgagatga tcggggctgg
      121 ggcggcgatg acccgcccgg cgtggtcttc acttaccgcc cgagccgcgc cggcgtgaac
      181 gcggagcaga tcctgcaggg cttcgacggc atcctgcagc tggacggcta tcccggctac
      241 gatcggctga cgcgcccctc gcgcaagggc ggcgcgccga tcacggttgc gcactgctgg
      301 gcacatgccc gccggaagct gaaggaagtc ttcgaccgtg atggatcgga gatcgccgcc
      361 gaggggctgc gccggatcgc cgagttctac cggatcgaaa ccgagatccg cggcatggga
      421 ccgggacagc gcctgtcggc gagacagaca cgcaccgcgc cgctggtggc ccagttcggc
      481 gaatggttgc agagccagcg ccgccggatc tccgccaagt cccgcctcgg agagaaactc
      541 gcctatatcc accggcagtg ggacgggcta cagaccttcc tgcaggacgg acgcgtcgag
      601 atcgactcca atgccgtgga gaatctcatc aggccgatag aggtggcccg ataaatctga
      661 acagttgagt taggtggatt ttccgctcct gatccggcag cgtgccggga cgaaggagcg
      721 aagatggcaa gacgaccaag acggaaccac agccctgcat tcaaggcgaa agtcgcgttg
      781 gcggcattga agggcgacaa gacgatgagc gatctggcga cgcagtttga cgttcatccg
      841 aaccagatca agcagtggaa ggatcagctc ctcgacggcg tgacggatgt ctttgatgac
      901 aggccgaaag cggcgaagga gcctgagatc gacgtgaagt cgctgcatgc gaagattggc
      961 cagctgacgc tggagaacga ttttttggaa ggagcgctcg acaaggccgg tctgttgccg
     1021 agcgcaaaga aatgacggat cgatcgcacg agctgagcct gacacggcag gccgaactcc
     1081 ttgggatcag ccggggcagc ctgtattacg agccgcgtcc cgtcagcgag catgacctca
     1141 agctcatgcg ccggatcgat gaattgcata tggaatatcc gttcgcaggc agccggatga
     1201 tgaagggcct tttgcgcctg gaaggcttca ccgccggtcg gctgcatgtg gcaacctgca
     1261 tgaagcggat gggcattcag gcgctttatc gcaggcccaa cacgtcgaaa ccggcacccg
     1321 gccataaggt ctatccctat ttgctgagaa agctggccgt gacacggccc aatcaggttt
     1381 gggcgatgga cattacctac gttcctatgg cgcgcgggtt tgtctatttg gtcgccgtgc
     1441 tggattggtt cagccggaag gttctggctt ggcgactatc aacgacgctg gaaactggac
     1501 cgtgcatcga agctttgaaa gaggcgatgc gccgccatgg caaacccgag atcatgaata
     1561 cggaccaggg cagccagttc acatccatcg agttcatcaa gacgctgaag gatgccggca
     1621 ttcagatcag catggacggc aaagg
//
LOCUS       DTVW01000056            1836 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1100534, whole
            genome shotgun sequence.
ACCESSION   DTVW01000056 DTVW01000000
VERSION     DTVW01000056.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1836)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1836)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1836
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1100534"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            5..442
                     /locus_tag="EYO87_00750"
     CDS             5..442
                     /locus_tag="EYO87_00750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017929377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HIC64532.1"
                     /translation="MALAACGGGGTGRTAPAGLTRTGLYPNETPYIRSRINFWARHYR
                     VPAQIVQRVVIRESRHRPTARNGAYYGLMQIRYQTARTMGYRGPADGLLDADTNLRYG
                     VRYLRGAWLVAGGDPDAAIMWYSRGYYDEAKRKGLLKKTGLRR"
     gene            complement(601..846)
                     /locus_tag="EYO87_00755"
     CDS             complement(601..846)
                     /locus_tag="EYO87_00755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64533.1"
                     /translation="MAQIPDDLIVEMRLALDDLGEARQQVADLVARECDPHLGAAVMR
                     LMIAAEQSTRKQMQPQNSLIWGWLFGGEKAAASAASR"
     gene            complement(1050..>1836)
                     /gene="ychF"
                     /locus_tag="EYO87_00760"
     CDS             complement(1050..>1836)
                     /gene="ychF"
                     /locus_tag="EYO87_00760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_353913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="redox-regulated ATPase YchF"
                     /protein_id="HIC64534.1"
                     /translation="LRCFEDGDVTHVEGRVDPIADAEVIETELMIADMESIERRLTNL
                     ARKLKGGDKEALQQQVLLQRALEALEAGRPARSVEVAEDDRKAWSMLQLLTAKPVLFV
                     CNVDEASAAGGNSQSARVARMAEAQGMGHVVISARIEEEISQLEPEEQQMFLSEMGLA
                     EAGLDRLIRAGYALLGLQTYFTVGPKEARAWTIRRGTLAPQAAGEIHGDFEKGFIRAE
                     TVGYDDYVAGNGEAGARESGKLRVEGKTYEVRDGDVLHFLFNA"
BASE COUNT          331 a          600 c          549 g          356 t
ORIGIN      
        1 cagcctggcc ctggccgcct gcggcggcgg aggaacgggc cgcaccgccc cggcagggct
       61 gaccaggacc ggcctttatc cgaacgagac cccctatatc cgatcccgca tcaatttctg
      121 ggcgcgccat taccgggtcc cggcccagat cgttcagcgt gtggtgattc gcgaatcccg
      181 ccaccgccct accgcgcgca acggtgccta ttacggtctg atgcagatcc ggtatcagac
      241 ggcgcgaacc atgggctatc gcggtccggc ggatgggttg ctggatgccg atacgaacct
      301 gcgctacggc gtcagatacc ttcgcggcgc atggctggtg gccggcggcg atcctgacgc
      361 ggcgatcatg tggtattcgc gcggctatta tgacgaagcc aaacgcaagg gactgctgaa
      421 aaagaccggt ctgcggcgct agcaggtgtc gttaatatac tgtcgcggta atgtgagtca
      481 tgctaatacg cggccgcgac tttcatctgt tttatcaatc gcgtgggaaa tcgcggctcg
      541 gcattgccga tagaaacgcg gttcgatccg gtctgcatga ccgcgcgacg gaacgccgcc
      601 tcagcgggac gcggcggatg cggcagcctt ttcgccgcca aacagccagc cccagataag
      661 ggaattctgt ggctgcatct gtttgcgggt cgattgttcg gccgcgatca tcagccgcat
      721 cacggcagcc cccagatggg ggtcgcattc ccgtgcaacc agatccgcaa cctgctgacg
      781 cgcctcgccg agatcgtcga gcgccaggcg catttcgaca atgagatcat cgggaatctg
      841 cgccatgaat atctctctgc ttcacgcggt tcccggtcag tttacccaag gtcagcatga
      901 tttgcacaaa gaaaattgct tttcggcgcg cgatcggcgt gttttcctcg cgaaaatgat
      961 aaccgaggac gattttataa tggtttcagg caaatcaggc gacgcgggtt tccggaaacc
     1021 aggaacagat ccggttcggg gccgaaacct caggcgttga acaggaaatg cagcacatcg
     1081 ccgtcccgga cctcgtatgt cttgccctcg acgcgcagct ttccggactc gcgcgcgccc
     1141 gcctcgccgt tgccggcgac ataatcgtca tagccgacgg tttcggcgcg gatgaagccc
     1201 ttttcgaaat cgccgtgaat ttcgcccgcc gcctgcgggg ccagcgtgcc gcggcggatg
     1261 gtccaggcac gcgcctcttt cgggccgacg gtgaaatagg tctgaagacc cagcaatgcg
     1321 tatcccgcgc ggatcagccg gtccaggccg gcctctgcca gacccatctc ggacaggaac
     1381 atttgctgtt cttccggttc aagctggcta atttcctctt cgatccgggc cgagatcacc
     1441 acatggccca tcccctgcgc ctcggccatc cgcgccaccc gcgccgactg gctgttgccg
     1501 ccggccgcgc tggcctcatc gacattgcag acgaacagca ccggcttcgc ggtcagaagt
     1561 tgcagcatgg accaggcctt gcggtcgtcc tcggccacct cgacgctgcg cgcgggccgg
     1621 ccggcctcca gagcctcgag cgcgcgttgc agcagcacct gctgctgtaa cgcctccttg
     1681 tcgccgccct tcagcttgcg ggccagattg gtcagccgcc gctcgatgga ttccatgtcg
     1741 gcgatcatca attcggtctc gatcacctcg gcatcggcga tgggatcgac gcggccttcc
     1801 acatgggtga catcgccatc ctcgaaacag cgcagc
//
LOCUS       DTVW01000057            1935 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1100536, whole
            genome shotgun sequence.
ACCESSION   DTVW01000057 DTVW01000000
VERSION     DTVW01000057.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1935)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1935)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1935
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1100536"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..152)
                     /locus_tag="EYO87_00765"
     CDS             complement(<1..152)
                     /locus_tag="EYO87_00765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008645541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HIC64535.1"
                     /translation="MASAADDISERLEAEIVEGVLPPGTRLEEPALAERFGVSRTPVR
                     EALQRLS"
     gene            286..1275
                     /locus_tag="EYO87_00770"
     CDS             286..1275
                     /locus_tag="EYO87_00770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013741250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HIC64536.1"
                     /translation="MKFKSTCAVLALSVAMPLAAGAEVLKASHQFPGGKGDARDEMMQ
                     MIAKDVADAGVDLEIRVYPGESLYKAKEQWSALTSGQLDMTSFPLDYAAGRVPQFSVT
                     LMPGLVRNHERAARLNDSPFMDTIHKLIEDNGAMVLSDAWLAGGFVSKKNCITAPDTI
                     SGQVTRAAGPAFEQMLVGAGASISSMPSSEIYTGMQTGVLDAANTSSGSMVSYRLYEQ
                     AKCLTAPGENALWFMYEPVLISKKTFDRLTPEQQQALKDAGQRAEEWFAEQAAGLDSK
                     MVDTFEKAGVEVVTMSPENFDAWLKIAQDTSYKNFSNEVEGGKDLIDQAMAVE"
     gene            1319..1819
                     /locus_tag="EYO87_00775"
     CDS             1319..1819
                     /locus_tag="EYO87_00775"
                     /inference="COORDINATES: protein motif:HMM:PF04290.10"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease"
                     /protein_id="HIC64537.1"
                     /translation="MSGLLRLLNGLARLSGLLAMMLLAAATVVVTQMVFSRYVLGAST
                     VWQTEFVIYATTAAMMLGSPYVLALRGHVGVDLLVEAAGPGLRRVFALISGLASLGFV
                     GALAWSGFVFLYEAASRGWTTDTIWALPLWIPFWPVPFAMGLMMLQLIVQMLMAITGE
                     TPGKEV"
BASE COUNT          324 a          574 c          676 g          361 t
ORIGIN      
        1 gacaggcgct gcaatgcctc gcgcaccggc gtgcgcgaga cgccgaaacg ctcggccagg
       61 gcgggctctt ccagtcgcgt gccggggggc aggacgcctt cgacgatctc ggcctccagc
      121 ctctcgctga tgtcgtcggc ggcgctggcc atcacgatcc tttctgtttg tgtgcataat
      181 tattgcttgt gtatacacaa aagtcgagac agaatgagca ccgggagaat gaacagccgc
      241 gtccgacgcg gcgaaacggg gcgggctccg cccgagggag gaaagatgaa gttcaagtca
      301 acctgcgccg ttctggcgct gagtgtcgcg atgccgctgg ccgccggggc cgaggttctg
      361 aaagccagcc accagtttcc gggcggcaag ggcgatgccc gcgacgagat gatgcagatg
      421 atcgccaagg acgtggccga tgccggcgtc gatctggaaa tccgcgtcta tccgggtgaa
      481 tcgctttaca aggccaagga acaatggagc gcgctgacca gcgggcaact ggacatgacc
      541 tcgttcccgc tggactacgc ggcgggacgg gtgccgcaat tcagcgtgac gctgatgccg
      601 ggactggtgc gcaaccacga acgcgccgcg cggctgaacg attcgccctt catggacacg
      661 atccacaagc tgatcgagga taacggggcc atggtcctgt cggatgcctg gcttgccgga
      721 ggtttcgtca gcaagaagaa ctgcatcacc gcgccggaca cgatttcggg ccaggtgacg
      781 cgggcggcgg gaccggcctt cgagcagatg ctggtcggcg cgggcgcctc gatttcctcg
      841 atgccctcgt ccgagatcta taccgggatg cagaccggcg ttctggacgc ggccaatacc
      901 tcgtcggggt cgatggtcag ctaccggctg tatgaacagg ccaaatgcct gaccgcaccg
      961 ggtgaaaacg ccttgtggtt catgtatgaa ccggtcctga tctcgaagaa gacgttcgat
     1021 cggctgaccc cggaacagca gcaggcgctg aaggatgccg gccagcgggc cgaggaatgg
     1081 ttcgccgaac aggccgccgg gctggacagc aagatggtgg acaccttcga gaaggccggg
     1141 gtcgaggtcg tcaccatgtc gcccgagaat ttcgatgcct ggctgaagat cgctcaggat
     1201 acctcgtaca agaatttctc gaacgaggtc gagggcggca aggatctgat cgaccaggcg
     1261 atggcggtcg aatgatcctg gcgatgaccc gcggaacggg aagccgcgga gggtggcgat
     1321 gagcggcctt ctgcggcttc tgaacggtct tgcccggctc agcggcctgc ttgcgatgat
     1381 gctgctggcc gcggcgacgg tcgtggtgac gcagatggtg ttttcccgct atgttctggg
     1441 cgcctcgacc gtgtggcaga ccgaattcgt catctacgcc accacggcgg cgatgatgct
     1501 gggcagcccc tacgtgctgg cgctgcgcgg ccatgtcggg gtcgatctgc tggtcgaggc
     1561 ggccggtccg gggctgcggc gggtcttcgc gctgatctcg gggctggcct cgttgggctt
     1621 tgtcggcgcg ctggcctggt ccggtttcgt ctttctctac gaggccgcct cgcgcggctg
     1681 gacgaccgac acgatctggg cgctgcctct gtggatcccg ttctggccgg tgcctttcgc
     1741 gatggggctg atgatgctgc aactgatcgt gcagatgctg atggcgatca cgggcgagac
     1801 gcccggcaag gaggtctgat gtctccgtcc atggcgggta tcgccgttct ggtcacgatg
     1861 ctgggcctgc tgggcgcggg cacacccatc gccttcgcgc ttggcttcgt cgcggtcgcg
     1921 gcgctggtcc tgtcc
//
LOCUS       DTVW01000058            1010 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1101203, whole
            genome shotgun sequence.
ACCESSION   DTVW01000058 DTVW01000000
VERSION     DTVW01000058.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1010)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1010)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1010
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1101203"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..342
                     /locus_tag="EYO87_00780"
     CDS             <1..342
                     /locus_tag="EYO87_00780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009819966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylcrotonoyl-CoA carboxylase"
                     /protein_id="HIC64538.1"
                     /translation="NYGMCGRGFAPNFLFAWPTAELATMSADIATNVMLELRRQKGGD
                     PGKMEADMKLIEEQVRAQYGEQSDPYYATSRLWDDGLIEPAQTRDILGLCLAIVTSVP
                     EAGRHTPVFRM"
     gene            352..>1010
                     /locus_tag="EYO87_00785"
     CDS             352..>1010
                     /locus_tag="EYO87_00785"
                     /EC_number="4.2.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009803479.1"
                     /note="Catalyzes the reversible hydration of unsaturated
                     fatty acyl-CoA to beta-hydroxyacyl-CoA; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase"
                     /protein_id="HIC64539.1"
                     /translation="MTNTYNTILVETDARGVATLTLNRPDKHNALNGELIAELYDAAE
                     KLAADDDVRIVVLTGAGKSFCAGGDFNWFASNVEKTRSERVAQSATLALLLRRLDTLP
                     KPLIGRINGPAYGGGVGMISVCDYTIGAEDARFGLTEVKLGLLPANISPYVVARIGKV
                     HSRETMLSGALFDTVRAERIGLLTEVVAPTDLDATVNRLVHDHLQAAPGAVADTKALI
                     A"
BASE COUNT          198 a          306 c          311 g          195 t
ORIGIN      
        1 aactacggca tgtgcggacg tggtttcgcc ccgaattttc tctttgcctg gcccacggcg
       61 gaactggcca ccatgtctgc cgacatcgcc acaaatgtga tgctggaact gcgccgccag
      121 aaagggggcg acccgggcaa gatggaggcc gacatgaagc tgatcgagga gcaggttcgg
      181 gcccagtatg gtgaacagtc cgatccctat tatgccacct cgcggctttg ggatgacggg
      241 ctgatcgaac ccgcgcaaac ccgcgatatc cttggcctgt gcctggccat cgtgacatcg
      301 gtgcccgaag ccggtcgcca tacgcctgta ttcagaatgt gaggcttcaa gttgaccaat
      361 acctacaaca cgatccttgt cgaaactgat gcgcgcggcg tcgccacgct gacgctcaac
      421 cgccccgaca aacacaatgc gctgaatggc gaattgatcg cagagctata cgatgccgca
      481 gaaaagctgg ctgcagatga cgatgtgcgt attgtggtcc tgaccggcgc gggcaagagc
      541 ttctgcgcgg gcggcgattt caactggttc gcctctaacg tcgagaaaac ccgtagtgaa
      601 agggtcgcac aaagcgccac gctggcgctg ctgttgcgcc gtcttgacac gctgcctaag
      661 cccttgatcg ggcggatcaa cggcccggcc tacggtggcg gtgtcggcat gatctccgtc
      721 tgcgactaca ccatcggcgc cgaagacgcg cgcttcggtc tgaccgaggt caaactgggc
      781 cttctgcccg cgaatatatc gccttatgtg gtggcccgca tcggcaaggt gcattcgcgt
      841 gaaaccatgc tgtcaggggc gttgttcgac acggtccgcg ccgagcggat cggtctgttg
      901 accgaagttg tcgcgccgac cgacctggac gccacggtga accggttggt gcatgatcac
      961 cttcaggccg cgccgggtgc cgtggccgat accaaggcgc tgatcgccta
//
LOCUS       DTVW01000059            1345 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1102156, whole
            genome shotgun sequence.
ACCESSION   DTVW01000059 DTVW01000000
VERSION     DTVW01000059.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1345)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1345)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1345
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1102156"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..61)
                     /locus_tag="EYO87_00790"
     CDS             complement(<1..61)
                     /locus_tag="EYO87_00790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013809477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HIC64540.1"
                     /translation="MAKAKFERTKPHVNIGTIGH"
     gene            293..1222
                     /locus_tag="EYO87_00795"
     CDS             293..1222
                     /locus_tag="EYO87_00795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009824601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tellurite resistance TerB family protein"
                     /protein_id="HIC64541.1"
                     /translation="MSLMKTLARVAAGVMLAKGIGAVMRNQSGSSQRGRADGRGGGLL
                     DDLFGNNLDGQGQGNLRDRLGQVLGGRSGSQAGTGQAYGGRGSGGARGGLGGLLDGLG
                     AGGSASGSGLGGLLGQLSGAGRTGDAPRGGSGGGLGDLLGGLLGGAAGGAAAGGLARK
                     DSQPQNDASFGELFNDAVIRDDEPEIAPTPEQNAVAGLMLRAMIQAAKSDGRIDDAEK
                     QRLLGHLGDSLDDDERQFIREQMAAPVDARALAGEVPKGLEAQVYLMSLLAIDFDNED
                     EARYLRDLAQAMGLSREAVNGIHAEAGATPLYT"
BASE COUNT          223 a          428 c          491 g          203 t
ORIGIN      
        1 catggccgat cgtcccgata ttgacgtgcg gtttcgtccg ttcaaacttt gcctttgcca
       61 tctagggcct cctgatcgcg gggcgtggca tgagatggcc ccgaattgac gtgcgccgcg
      121 atgtataagc cggccccgga aaaatcaagc ctccgcaagc ctgcatttcc aaggcaaaag
      181 ccgccccgcc cgacgcaaga ttgtcgtgac gccgggaacc ggtcgggccg gatgcgggtt
      241 cgcgtgctga cgcgccgccc ggccgggcgg ccccagccga aaggaccacg tcatgagcct
      301 gatgaaaaca cttgcccgcg tcgccgccgg agtcatgctg gccaagggaa tcggcgcggt
      361 gatgcgcaat cagtccggat cctcgcagcg tggtcgcgcg gatggtcggg gcggcgggct
      421 gctggacgac ctgttcggca acaatctcga tggacagggc cagggcaatc tgcgcgaccg
      481 gctgggccag gtcctgggcg gccgttcggg cagtcaggcg gggacgggcc aggcctatgg
      541 cggtcgcggg tcgggcggcg cccgcggggg cctgggcggt ttgctggacg gacttggcgc
      601 gggcgggtcc gcgtcgggca gcgggctggg cgggttgctg ggccagcttt cgggcgccgg
      661 cagaacgggc gacgcccctc gcggtggcag cggcggcggt ctgggcgacc tgctgggcgg
      721 actgctgggc ggcgccgccg gcggcgccgc ggccggcggg cttgcgcgca aggattcgca
      781 gccgcaaaac gacgcgagct tcggcgaatt gttcaacgac gcggtgatcc gcgatgacga
      841 acccgagatc gcgcccactc cggaacagaa cgccgtggcg gggctgatgc tgcgggcgat
      901 gatccaggcc gccaaatccg atggccgcat cgacgatgcc gaaaagcaac gactgctggg
      961 acatctgggc gacagcctcg acgacgacga acggcagttc atccgcgaac agatggccgc
     1021 gccggtcgat gccagggcgc ttgcaggcga agtgcccaaa gggctggagg cgcaggtcta
     1081 tctgatgtcc ctgctggcca tcgatttcga caatgaagac gaggcccgct atctgcgtga
     1141 tctggcccag gccatgggcc tgtcgcgcga ggccgtgaac ggcatccatg ccgaggccgg
     1201 cgccacaccg ctctatacct gacccgtgct gcgcgaccgg cgcggaaaga tgcctggcgg
     1261 gccatcgcaa tcccgtgatc gattcgcgat gagaattgat ccggctccgg ccctctgcca
     1321 gtatcggcgc cacgaaggcc agata
//
LOCUS       DTVW01000060            1443 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1102886, whole
            genome shotgun sequence.
ACCESSION   DTVW01000060 DTVW01000000
VERSION     DTVW01000060.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1443)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1443)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1443
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1102886"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(179..>1443)
                     /gene="infB"
                     /locus_tag="EYO87_00800"
     CDS             complement(179..>1443)
                     /gene="infB"
                     /locus_tag="EYO87_00800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HIC64542.1"
                     /translation="ADDAVMPQTVEAINHAKAAGVPMIIAINKVDKPDADPDKVRSAL
                     LHHEVVVEKLSGDVQDVEVSAKTGQGLDQLLESIALQSEILELVANPDRAAQGAVIEA
                     QLDVGRGPVATVLVQNGTLKRGDIFVVGEQWGKVRALINDKGDRVEEAGPSVPVEVLG
                     LNGTPEAGDVLNVVDTEAQAREIADYRSQAAKDKRAAAGAATTLEQLMAKAKADESVA
                     ELPVVVKADLQGSAEAIVQALEKVGNDEVRVRVLHYGVGAITESDIGLAEASNAPVIG
                     FNVRANAPARNGANQKGVEIRYYSVIYDLVDDIKAAASGLLSAEVRENFIGYAEIREV
                     FKVTGVGKVAGCLVTEGIARRSAGVRLLRDNVVIHEGTLKTLKRFKDEVKEVQSGQEC
                     GMAFENYDDIRPGDVIEIFEREEVERKL"
BASE COUNT          228 a          495 c          436 g          284 t
ORIGIN      
        1 atgatgccga atggcaacgc cgtggttcgg gtcggttcgc gaacctatga gggcaagccg
       61 gtcggcgctt gacggcccgc gaccgtgaag gccggccgat ccaatcagag agaccgagtc
      121 agaaaagggc ggccttggtg ccgccctttt cccgttttcc atacacaggc gcgaaaggct
      181 acagcttgcg ctcgacctct tcccgctcga aaatctcgat gacatcgccc ggacggatgt
      241 cgtcgtaatt ctcgaaggcc atgccgcatt cctggccgga ctggacttcc ttgacctcgt
      301 ccttgaaccg tttcagcgtc ttcagcgtgc cttcgtgaat gaccacgttg tcgcgcagca
      361 gacgcacccc ggcactgcgg cgggcaatgc cttcggtgac caggcagccc gcgaccttgc
      421 cgacgcccgt caccttgaag acctcgcgaa tttcggcgta accgatgaag ttttcgcgaa
      481 cctcggccga aagcagaccc gacgccgccg ccttgatgtc atccacgagg tcatagatga
      541 ccgagtaata gcggatttcg acgcccttct gatttgcgcc gttgcgcgcg ggcgcgttgg
      601 cgcgcacgtt gaagccgatc acgggggcat tgcttgcctc ggccaggccg atatcggatt
      661 cggtgatcgc gccgacgccg taatgcagca cgcggacgcg cacctcatcg ttgccgacct
      721 tttccagcgc ctgcacgatc gcctcggccg aaccctgcaa gtcggccttc acgaccaccg
      781 gcagttcggc cacgctttcg tcggccttgg ccttggccat cagctgttcc agcgtggtcg
      841 cggcaccggc ggcggcgcgc ttgtccttgg cggcctggct gcggtaatcg gcgatctcgc
      901 gggcctgggc ctcggtgtcg accacgttca gcacgtcgcc ggcctcgggc gtgccgttca
      961 ggcccagcac ttcgacaggg accgaaggac cggcctcttc cacacgatcg cccttgtcgt
     1021 tgatcagcgc ccggaccttg ccccattgct cgcccacgac gaagatgtcg ccgcgcttca
     1081 gcgtgccgtt ctggaccaga accgtcgcca ccgggccgcg tcccacgtca agctgcgcct
     1141 cgatcaccgc gccctgtgcg gcgcggtcgg gattggccac cagttccagg atctcggact
     1201 ggagtgctat ggattccagc aattgatcca ggccctgtcc ggtcttggcc gacacctcga
     1261 catcctgcac atcgcctgac agcttctcga cgaccacctc gtgatgcagc agcgcgctgc
     1321 gcaccttgtc gggatcggcg tcgggcttgt cgaccttgtt gatcgcgatg atcatgggga
     1381 cgccggccgc cttggcgtga ttgattgcct cgacggtctg cggcatcacg gcgtcatccg
     1441 ccg
//
LOCUS       DTVW01000061            1436 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1105989, whole
            genome shotgun sequence.
ACCESSION   DTVW01000061 DTVW01000000
VERSION     DTVW01000061.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1436)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1436)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1436
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1105989"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..465
                     /locus_tag="EYO87_00805"
     CDS             <1..465
                     /locus_tag="EYO87_00805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64543.1"
                     /translation="DSNAVQGIGSFLPAGRMRGGGIGRIGTGSGYQAAILSGLCRRVY
                     TVDRHRRLVQEAEAIFRELDLFNITAQVSDGSRGLPDQAPFDRIIVTAAAEDPPGPLL
                     AQLKIGGIMVVPVGQSDTVQTLIRVTRTETGFDYDELRQVRFVPLVEGLGQT"
     gene            508..>1436
                     /locus_tag="EYO87_00810"
     CDS             508..>1436
                     /locus_tag="EYO87_00810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011749004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HIC64544.1"
                     /translation="MSRTYRLIGGASAAVLLLASCGANGFDPDLRRMMPGALSTAEAA
                     ATAAPRPQPDSRGLISFPDYQIAIASSGDTPATIAARLGLGADELARYNALPVNASLQ
                     QGQTLVLPRRVADATGAAAPAARSGGAPPADAASDSPASTASSVGGQPRQHVVAAGET
                     AWSISRRYGVSVQDLARWNGLPSDMSVRLGQRLIVPIPGQRAPDPAAITTAPGSGSPT
                     PRPPSAADPLPREDTAPASKPAPAPDGPDLGSTRTAASGGGRFSMPVPGAIISVYEKG
                     KNEGIDIAAPAGTPIKAAGAGVVAAITQDTSSTP"
BASE COUNT          216 a          514 c          500 g          206 t
ORIGIN      
        1 gacagcaatg cagtacaagg cattgggtcg tttcttcccg ctggccgcat gcgcggtggc
       61 ggcattggtc gcatcggcac cggctcgggc tatcaggcgg caatcctgtc ggggctttgc
      121 cggcgggtct ataccgtcga ccgccaccgc cgtctggtgc aggaggccga ggcgatcttc
      181 cgggaactgg atctgttcaa catcaccgcg caggtcagcg acggatcgcg gggcctgccc
      241 gatcaggcgc ccttcgatcg catcatcgtc accgccgcgg ccgaagatcc gccggggccg
      301 ctgttggcac aattgaagat cggcggtatc atggtggttc cggtggggca gtccgatacg
      361 gtgcagacgc tgatccgggt gacgcggacc gagaccggtt tcgactatga cgaattgcgg
      421 caggtcaggt tcgttccgct ggtcgagggg ttgggacaga catgaccccc gcgcggcggc
      481 agaggcagac aggccaagga tgacagcatg agcaggacct acaggctgat cgggggcgcc
      541 agcgcggcag ttctgttgct ggcatcctgc ggggcgaacg gattcgaccc cgatctgcgc
      601 cggatgatgc ccggcgcgct gagcaccgcc gaggcggccg cgaccgccgc cccgcggccg
      661 cagccggaca gtcgcgggct gatttccttc cccgattatc agatcgccat cgccagcagt
      721 ggcgacacgc cggccacgat cgccgcgcgg ctgggcctgg gcgccgacga actggcccgc
      781 tacaacgccc tgccggtgaa tgcctcgctg caacagggcc agacgctggt tctgccgcgc
      841 cgtgtcgccg acgcaaccgg cgcggcggcg cccgcggccc gcagcggcgg cgcgcccccg
      901 gccgacgccg cgtccgacag cccggcctcg accgcgtctt cggtcggcgg ccagccccgg
      961 cagcatgtcg tcgccgcggg cgaaaccgcc tggtcgattt cgcgcagata cggggtgtcg
     1021 gtccaggatc tggcccgttg gaacgggttg ccctccgaca tgtcggtgcg acttggccag
     1081 cggctgatcg tgccgattcc gggccagcgc gcgcccgatc cggcagcgat caccaccgcg
     1141 ccgggcagcg gcagccccac gccgcgtccg ccctcggccg cggatccgct gccgcgcgag
     1201 gataccgccc ccgcctcgaa acccgcgccg gcgccggacg gccccgatct cggctcgacc
     1261 cggaccgccg cctcgggtgg cggccgtttc agcatgcccg ttccgggcgc aatcatcagt
     1321 gtctatgaaa agggcaagaa cgaggggatc gacatcgccg cccccgccgg aacaccgatc
     1381 aaggcggctg gcgccggcgt cgtcgccgcg atcacgcagg acacatccag cacgcc
//
LOCUS       DTVW01000062            1231 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1107928, whole
            genome shotgun sequence.
ACCESSION   DTVW01000062 DTVW01000000
VERSION     DTVW01000062.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1231)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1231)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1231
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1107928"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..512)
                     /locus_tag="EYO87_00815"
     CDS             complement(<1..512)
                     /locus_tag="EYO87_00815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009820194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal translocating P-type ATPase"
                     /protein_id="HIC64545.1"
                     /translation="MPASQNLRIPVQNMSCASCVGRVDRAISGLPGVDEVNVNLAAET
                     AQFRIDSADRLPQVVQALDSAGYPARTRKVRLAISSMSCASCVGRVDKALAAVPGVTE
                     VNVNLASETATVTFVEGAVELDALIRAADAAGYPAKAADETPVEERGERKQAEVRALA
                     RKTAFAAALA"
     gene            651..857
                     /locus_tag="EYO87_00820"
     CDS             651..857
                     /locus_tag="EYO87_00820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018065822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper chaperone"
                     /protein_id="HIC64546.1"
                     /translation="MSNFSVPGMSCGHCTAAIEKSVKALDPTAKVNCDLGSHTVSVES
                     FLSDRAVSEAIRDAGYDVADPAAT"
     gene            complement(905..>1231)
                     /locus_tag="EYO87_00825"
     CDS             complement(905..>1231)
                     /locus_tag="EYO87_00825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013959916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family protein"
                     /protein_id="HIC64547.1"
                     /translation="VFAARAALASREQGKYEEFHLALMGMQGRAEEASVMRIAEEIGL
                     DVEKLRADMAAPEVDEHIATSRRLTQALGFNGTPSFVIGDNLVPGFVEQEQLGALVEQ
                     VRGAAQ"
BASE COUNT          217 a          423 c          378 g          213 t
ORIGIN      
        1 aaggccagcg ccgccgcgaa ggcggtcttg cgggccagcg cgcggacttc cgcctgcttg
       61 cgctcgcccc gctcttccac cggggtctca tcggcggcct tcgcgggata gccggccgca
      121 tctgcggccc ggatcagcgc gtccagttca accgcccctt ccacgaaggt cacggtcgcg
      181 gtttcggacg caagattgac attgacctcg gtcacgccgg gaacggccgc cagcgccttg
      241 tcgacgcggc cgacgcagga cgcacaggac atggacgaga tggcaagacg caccttccgg
      301 gtgcgggcgg gatagccggc gctgtccagc gcctggacca cctgcggaag gcgatcggcg
      361 gaatcgatcc ggaactgcgc cgtctccgcc gcaaggttca cattgacctc atcgacgccg
      421 ggcagccccg aaatcgcgcg atcgacccga ccgacacagg acgcgcagga catgttctgg
      481 accgggatcc gcagattttg tgaagctggc atggttgtct cctacactgc tggatcgtca
      541 cataaggctt ccacctactg gaaggtcaac tgtttcgagg cgaatttgtt tccccttgac
      601 cttcccgtgc tggaagcacc cacctttcgg cgcagacaaa ggagatgaac atgagcaact
      661 tcagcgttcc cggcatgagt tgcggtcact gcaccgcggc gatcgaaaag tccgtcaagg
      721 cgcttgaccc gacggcgaag gtcaattgcg atcttggcag ccacaccgtt tcggtcgaaa
      781 gctttctcag cgaccgcgcc gtatccgaag cgatccgcga tgcgggctac gacgtggcgg
      841 atccggccgc aacctgagtc ctgttcggcg ccgggcagcc cggcgccgaa gcggcccgtc
      901 gatcctattg cgccgcgccg cgcacctgct cgaccagggc gccaagctgt tcctgttcga
      961 caaagcccgg aaccaggttg tcgccgatca cgaaggacgg cgtgccgttg aagccaagcg
     1021 cctgcgtcag ccgccgggag gtcgcgatat gttcgtcgac ttccggcgcg gccatgtcgg
     1081 cgcgcaattt ctcgacatcc agcccgatct cttccgcgat ccgcatcacc gaggcttctt
     1141 ccgcccgccc ctgcatcccc atcagagcca ggtggaattc ctcgtatttg ccctgttcgc
     1201 gcgaggccag ggcggcacgc gcggcaaaca c
//
LOCUS       DTVW01000063            1023 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1107980, whole
            genome shotgun sequence.
ACCESSION   DTVW01000063 DTVW01000000
VERSION     DTVW01000063.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1023)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1023)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1023
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1107980"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..291)
                     /locus_tag="EYO87_00830"
     CDS             complement(<1..291)
                     /locus_tag="EYO87_00830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64548.1"
                     /translation="MKKNSSHMSRQPLAMLALFFHAVWLSVFAYFLWVGRSPVGDEDK
                     PSLVGALCEGFKEDAIKLASELGRLDVVSLSLTVLGVVLALAALSSFFMMRHA"
     gene            complement(295..>1023)
                     /locus_tag="EYO87_00835"
     CDS             complement(295..>1023)
                     /locus_tag="EYO87_00835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010392520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl phosphate synthase large subunit"
                     /protein_id="HIC64549.1"
                     /translation="VPFVAKATDSAIASIAARLMAGEPMSHFPERAPYPEGVGPEDDL
                     PFADPLTLADPITPWFSVKEAVLPFARFPGVDTLLGPEMRSTGEVMGWDRNFPRAFLK
                     AQLGAGVALPHDGRVFISVKDADKTDAMAQAARDLVAMGFALTATSGTADFLASQGVE
                     STRVNKVYEGRPNIVDRLKDGEIAMVLNTTEGVQAIADSRDIRSVALYDKIPYFTTAA
                     GSIAAVAAIRSREEGEVGVRSLQA"
BASE COUNT          200 a          321 c          325 g          177 t
ORIGIN      
        1 cgcgtgcctc atcatgaaga atgaactcaa cgccgccagc gccaagacta ctccgagaac
       61 cgttaacgac aagctaacga catcgagcct accgagttcc gaggcgagct tgattgcatc
      121 ttctttgaag ccttcgcaaa gagcacctac caagcttggc ttgtcctcgt ctcctacggg
      181 agaccgtcct acccaaagaa aataagcaaa tacggaaagc cagacagcat gaaagaacag
      241 ggccagcata gccaatggct gacggctcat atgtgatgag ttctttttca tgattcaagc
      301 ctgcaagctt cgcaccccga cttccccttc ctcgcgtgac cggatggcgg cgaccgctgc
      361 gatgctgcct gcggccgtgg tgaaataggg gatcttgtca tacagcgcga cagagcggat
      421 gtcgcggctg tcggcgatgg cctgcacgcc ctcggtcgtg ttcaggacca tcgcgatctc
      481 gccgtccttc aggcggtcga cgatgttcgg gcggccctcg tagaccttgt tcacgcgggt
      541 cgattccacg ccctgcgagg cgaggaaatc ggccgtgccc gaggtcgccg tcagcgcaaa
      601 gcccatcgcc accagatcgc gcgcggcctg cgccatcgcg tcggtcttgt cggcgtcctt
      661 gaccgagatg aagacacggc cgtcatgggg cagcgcgacg cccgcgccca gttgcgcctt
      721 taggaaggcg cgcgggaagt tgcggtccca gcccatcacc tcgccggtcg aacgcatttc
      781 cgggcccagc agcgtatcga cgccggggaa gcgggcgaag ggcagcacgg cctccttgac
      841 cgaaaaccag ggcgtgatcg ggtcggccag ggtcagcgga tcggcaaagg gcaggtcgtc
      901 ttccggcccg acgccttcgg gatagggcgc gcgttcggga aagtgcgaca tcggctcgcc
      961 ggccatcagg cgggcggcga tggatgcgat ggcgctgtcg gtggccttgg cgacgaaggg
     1021 cac
//
LOCUS       DTVW01000064            1005 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1108800, whole
            genome shotgun sequence.
ACCESSION   DTVW01000064 DTVW01000000
VERSION     DTVW01000064.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1005)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1005)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1005
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1108800"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..517)
                     /locus_tag="EYO87_00840"
     CDS             complement(<1..517)
                     /locus_tag="EYO87_00840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008553326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein MotB"
                     /protein_id="HIC64550.1"
                     /translation="MAVGKGSPPAIIIKRSVESGEAGHHGGAWKVAYADFVTAMMAFF
                     LLMWLLNATTEKQRTGLAEYFNPTLVRTPGASGDGVEAGMRSAVVQDLPDSEKAAEFD
                     DISRRIQNQLSGTGAESMQMTNLLRHVVTRMTDEGLVIELSDLTEQPLFMDDTAQPQP
                     ALEELARIIARV"
     gene            complement(609..>1005)
                     /locus_tag="EYO87_00845"
     CDS             complement(609..>1005)
                     /locus_tag="EYO87_00845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010392215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phenylacetate--CoA ligase family protein"
                     /protein_id="HIC64551.1"
                     /translation="LNPDYPLIRFATGDLSAIMPGTSPCGRTNMRIRGWMGRADQTTK
                     IKGMFVRPEQVAALVARHPEILRARVIADRDGEMDVMIVQLESSAGAGAAFDGSVVDT
                     LKLKGRIQIVAPGSLPNDGKVIEDRRSYD"
BASE COUNT          178 a          326 c          301 g          200 t
ORIGIN      
        1 gaacgcgggc aatgatccgg gccagttctt caagtgcggg ttgcggctgt gcggtgtcat
       61 ccatgaaaag cggctgctcg gtcaggtcag acaattcgat caccagccct tcatcggtca
      121 tccgggtcac gacatgccgc agcagattcg tcatctgcat cgattcggcg cctgttccgg
      181 acagttgatt ctggatccgg cgcgagatgt cgtcgaattc cgcggccttt tcactgtcgg
      241 gcaggtcctg cacgacggca gagcgcatgc ctgcctcgac cccgtctccg gacgcgcccg
      301 gagtgcgcac aagggtcggg ttgaaatatt ccgccaggcc ggtccgctgc ttttccgtgg
      361 tggcgttcag caaccacatc agcaggaaga aggccatcat cgcggtcacg aaatccgcat
      421 aggccacctt ccatgcgccg ccatgatggc cggcttcacc gctttcgacg ctgcgcttga
      481 tgatgatcgc cggcggcgat cccttgccca cggccatgtc gccacctgcc tttcgatcac
      541 agcttggcaa tctcgggccg ggcggcgcac gaaacaagtt aacggatcaa atgcctgaca
      601 ttccgcgtct aatcatagct gcggcgatcc tcgatgacct tgccgtcatt gggcaggctg
      661 cccggagcga cgatctgtat ccggcccttc agtttcagcg tatccaccac cgaaccgtcg
      721 aaagcggccc ccgccccggc ggaggattcg agctggacga tcatcacgtc catctcgcca
      781 tcgcggtccg cgatcacgcg cgcacgcagg atttcgggat ggcgcgcgac cagcgctgcg
      841 acctgttcgg gacgcacgaa catgcccttg atcttggtcg tctggtcggc tcggcccatc
      901 cagcccctga tgcgcatatt cgtgcgcccg cagggactgg ttccgggcat gatggcggac
      961 agatcgccgg ttgcgaagcg gatcagagga taatccgggt tcagc
//
LOCUS       DTVW01000065            1807 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1108923, whole
            genome shotgun sequence.
ACCESSION   DTVW01000065 DTVW01000000
VERSION     DTVW01000065.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1807)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1807)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1807
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1108923"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..238
                     /locus_tag="EYO87_00850"
     CDS             <1..238
                     /locus_tag="EYO87_00850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009570625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SPFH/Band 7/PHB domain protein"
                     /protein_id="HIC64552.1"
                     /translation="QQAKARRVMADAEAYATSIIAEAISSKGLEAAQYQVAMKQVEAL
                     VQVGQGSGKQVVLLPAAALDAFKDAFSQLRGHSS"
     gene            235..504
                     /locus_tag="EYO87_00855"
     CDS             235..504
                     /locus_tag="EYO87_00855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010392227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64553.1"
                     /translation="MSWLNGWLWLIAALALAALELFAPGWVFMGLAASVGLMGILLLT
                     GLWGAGLAVTLVVTAILSGVIWLILRRVAGSNRGQVRRWDRDINE"
     gene            501..950
                     /locus_tag="EYO87_00860"
     CDS             501..950
                     /locus_tag="EYO87_00860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017916778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HIC64554.1"
                     /translation="MTARGAASHGYLGNEEAPFHGAKLLLMESRRLLTCLRDDFAHIP
                     FPAHWDLPGGGREGAERPVDCALRELFEEFGLRLASERLSAHVFRSHQRPDMVSWLFA
                     GRLVPAEIEAIRFGDEGQEWRMMPVAEFLTHPRAVPHVKDWIMAALR"
     gene            complement(1025..>1807)
                     /locus_tag="EYO87_00865"
     CDS             complement(1025..>1807)
                     /locus_tag="EYO87_00865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007256033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent chaperone ClpB"
                     /protein_id="HIC64555.1"
                     /translation="FLFDDDNAMVRIDMSEFMEKHSVARLIGAPPGYVGYDEGGVLTE
                     AVRRRPYQVILFDEVEKAHPDVFNVLLQVLDDGVLTDGQGRRVDFKQTLIILTSNLGS
                     QALSHLPEEADSTDARHQVMEAVRGHFRPEFLNRLDEIIIFRRLSRANMDGIVSIQLM
                     RLEHRLAQRKITLDLDQDARQWLADQGYDPIFGARPLKRVIQRALQDPLAELLLSGEV
                     LDGQTVHVGAGDEGLIVGNRVGRAGPKLGAVGEGPKPDATLH"
BASE COUNT          298 a          559 c          623 g          327 t
ORIGIN      
        1 gcaacaggcc aaggcgcgcc gcgtcatggc cgacgccgaa gcctatgcga cctcgatcat
       61 cgccgaggcg atttccagca aggggctgga ggccgcgcaa tatcaggtgg cgatgaagca
      121 ggtcgaggct ttggtgcagg tcggacaggg cagcggcaag caggtggtcc tgttgccggc
      181 ggcggcgctg gatgcgttca aggatgcctt cagccagctt cggggacatt cgtcttgagc
      241 tggctgaacg gatggctgtg gctgatcgcg gcgctggctc tggcggcgct tgaactgttc
      301 gcgccgggct gggtgttcat ggggcttgcg gcctcggtcg ggctgatggg gatcctgctg
      361 ttgaccgggt tgtggggggc cggtctggcg gtgacgctgg tggtgacggc gatcctgtcg
      421 ggcgtgatct ggctgatcct gcgccgggtc gccggaagca atcggggtca ggtccgccgg
      481 tgggatcgag acatcaacga atgacggcgc ggggggccgc gtcccacggg tatttgggca
      541 acgaagaagc gccgtttcac ggtgcgaaac tgctgctgat ggagagcagg cggttgctga
      601 cctgcctgcg cgacgatttc gcccatatcc ccttcccagc gcattgggat ctgcccggcg
      661 gcggccgcga gggtgccgag cggccggtgg attgcgcctt gcgcgaattg ttcgaggagt
      721 tcgggctgcg cctggcgtca gaacgcctgt cggcgcatgt cttccgatcg catcagcgcc
      781 ccgacatggt gtcatggctg ttcgccgggc ggctggtgcc ggccgagatc gaggcgatcc
      841 gcttcggcga cgagggccag gaatggcgga tgatgccggt cgcggaattc ctgacccatc
      901 cgcgcgccgt gccgcatgtc aaggactgga tcatggccgc gctgagatag cgcgcccggc
      961 agagaggaca gatccggatc gagaaccgaa aaagggccgc gaaaggtttt cgcggccctc
     1021 ttcttcaatg caaggttgcg tcgggcttcg gaccttcgcc cacagcgccc agcttcgggc
     1081 cggcgcggcc gacgcggttg ccgacgatca gcccctcatc gcccgcgccg acatgcaccg
     1141 tctggccgtc cagcacctcg cccgacagca gcagttccgc cagcggatcc tgcaaggccc
     1201 gctggatcac ccttttcagc gggcgggcgc cgaagatcgg atcatagccc tgatcggcca
     1261 gccattgccg tgcgtcctga tccagatcca gcgtgatctt gcgctgcgcc aggcgatgtt
     1321 ccagccgcat cagctggatg ctgacgatgc cgtccatgtt tgcccgcgac aggcggcgga
     1381 agatgatgat ctcgtccaga cggttcagga attcggggcg gaaatgaccc cgcacggcct
     1441 ccatcacctg atggcgggca tcggtcgaat ccgcctcctc gggcagatgc gacagcgcct
     1501 gggaaccgag attcgaggtc aggatgatca gcgtctgctt gaaatccacg cgccgcccct
     1561 gcccatcggt cagcacgccg tcgtccagca cctgcaacag cacgttgaag acgtcgggat
     1621 gcgccttttc gacctcgtcg aacaggatca cctgataggg cctgcgccgc acggcctcgg
     1681 ttagcacgcc gccctcgtca tagccgacat agcccggagg tgcgccgatc agccgcgcca
     1741 cggaatgttt ttccatgaat tcggacatgt cgatgcggac catcgcattg tcgtcgtcga
     1801 acagaaa
//
LOCUS       DTVW01000066            1186 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1109092, whole
            genome shotgun sequence.
ACCESSION   DTVW01000066 DTVW01000000
VERSION     DTVW01000066.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1186)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1186)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1186
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1109092"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..989
                     /locus_tag="EYO87_00870"
     CDS             <1..989
                     /locus_tag="EYO87_00870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005616530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="inorganic phosphate transporter"
                     /protein_id="HIC64556.1"
                     /translation="VSTTHSVVGGVMGAGIAAAGFAAVNWMLVGTIAASWVISPLLGG
                     LIAAAFLWFIEARIIHQPDKVAAARRWVPGLVGIMAGTFAAYLALKGLKHLFDVSLGL
                     SIVIGLAIGIVTWLAMIPVIARQSRGLENRNKSLKVLFAIPLVVSAALLSFAHGANDV
                     ANAVGPLAAIVQTVASGSVGQSFTIPIWVMLIGAFGISFGLFLFGPKLIRMVGSEITR
                     LNPMRAYCVALSAAITVIIASWLGLPVSSTHIAVGAVFGVGFFREWDAERRARIARLA
                     VDAPLVNPEERRRRKLVRRAHVLTIGAAWVVTVPAAALLSAIIFYVMRTING"
BASE COUNT          159 a          389 c          391 g          247 t
ORIGIN      
        1 cggtctcgac cacgcattcc gtcgtcggcg gcgtcatggg cgcgggcatc gccgccgccg
       61 gttttgccgc cgtaaactgg atgctggtcg gcacgattgc ggcaagctgg gtcatctcgc
      121 ccttgctggg cgggctgatc gcggccgcgt tcctgtggtt catcgaggcc cggatcatcc
      181 accagcccga caaggttgcg gccgcacgcc gctgggtgcc cggccttgtc ggcatcatgg
      241 ccggcacctt tgccgcctac ctggcgctga aagggctgaa acatctgttc gacgtgtcgc
      301 tgggtctttc gatcgtgatc gggctggcca tcgggatcgt gacctggctg gcgatgatcc
      361 cggtgatcgc ccgccagtcg cggggcctcg agaaccgcaa caagtcgctg aaggtcctgt
      421 tcgcgatccc gctggtcgtc tcggccgcgc tgctcagttt cgcgcatgga gccaatgacg
      481 tggccaatgc cgtcggtccc ttggccgcga tcgtgcagac cgtcgcctcg ggcagcgtcg
      541 ggcagtcgtt cactattccc atctgggtca tgctgatcgg cgccttcgga atcagcttcg
      601 ggctgttcct gttcggcccc aaactgatcc gcatggtggg cagcgagatc accaggctga
      661 atccgatgcg ggcctattgc gtggcgctgt cggccgcgat taccgtcatc atcgccagct
      721 ggctgggtct gccggtcagt tcgacccata tcgcggtggg cgcggtcttc ggcgtgggct
      781 tctttcgcga atgggatgcg gaacgccgcg cccggatcgc acggctggca gtggacgcgc
      841 cgctggtcaa ccccgaggaa cggcgtcgtc gcaagctggt tcgccgggcg catgttctga
      901 ccattggtgc cgcctgggtg gtgacggttc ccgccgcggc cctgctgtcg gcgatcatct
      961 tctacgtgat gcgcaccatc aacggctgat atgttggcgg tgcccgcgac attcttcgcg
     1021 gtcgccgccg aaaccgatca gcgaccgcgt catgtccgcg ggcgccgaaa ttgccgaagg
     1081 ccggaaaagg tcgctgatgc gttttcccgt gcgtgatccg gaaccctagt tggatttctg
     1141 atccgtcgcg ccgccattca tgccgtcgcc catcatgccg ccgccc
//
LOCUS       DTVW01000067            2749 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1110636, whole
            genome shotgun sequence.
ACCESSION   DTVW01000067 DTVW01000000
VERSION     DTVW01000067.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2749)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2749)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2749
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1110636"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..263
                     /locus_tag="EYO87_00875"
     CDS             <1..263
                     /locus_tag="EYO87_00875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009824495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA polymerase III subunit epsilon"
                     /protein_id="HIC64557.1"
                     /translation="MANSDHLMGALVLTTAVIAWAEVARPLRFLNILFGLWLIVAPLF
                     LGGGTVAGSLVGMMLGGALILLSLPRGRRSDEHYGSWDRFIV"
     gene            724..1068
                     /locus_tag="EYO87_00880"
     CDS             724..1068
                     /locus_tag="EYO87_00880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64558.1"
                     /translation="MQLFARLILVALLAAFAVGTVAQAAGSAGIATEMAAAGVATSDM
                     ADCDACGDSGAGGMGLACEFFCGAGSFSAVLAPQTDRFAEATGSSLWPAAAHAPSGVI
                     GTPAKQPPRILV"
     gene            1223..2188
                     /locus_tag="EYO87_00885"
     CDS             1223..2188
                     /locus_tag="EYO87_00885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005848457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exo-alpha-sialidase"
                     /protein_id="HIC64559.1"
                     /translation="MPLSAASRSAATSRHCFSDPSRRGFLTASLAAAGLLLLPTSLRA
                     ADPARSSLAALAFDGDVLLAAGQALVRSDDGGQSWSPLSGPAQILTLATHPERPGRIL
                     AGLAADGIALSEDGGRTWTSRANGLPAGPTDALAIAAGQPDMIYAAIRGDGLWKSEDA
                     GESWSLAMDRPWLDEAERDLLTLASVDLATGMGGIWIYAGTEKGLTRLPDCFCRWQDV
                     QPGNAMDALVSGDAPPSEAPLPAGQPIRALVSAASAPQTLYAALSSGVWTSRDAGVVW
                     SRLAPGDAVSVAVHPTNPDYIFAAVDGGLKQSRDGGTTWSALAAI"
     gene            2200..2700
                     /locus_tag="EYO87_00890"
     CDS             2200..2700
                     /locus_tag="EYO87_00890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017927551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-binding protein"
                     /protein_id="HIC64560.1"
                     /translation="MKNVFAFAPIAALAVAGGIAFALPSFAQETGSAASAGAPAEAAA
                     QSKQLTMWRSPGCGCCDAWGAYMEKAGYTVEIIDDRNFDKTSVSVGVPQQGLGCHLAK
                     VGGYFIGGLVPAEVVDRLLEEKPEITGITLPGMPPNAPGMAKQKSGTLRVYSFGPEGV
                     AVYSDE"
BASE COUNT          427 a          904 c          928 g          490 t
ORIGIN      
        1 cgatggccaa cagcgatcac ctgatgggag cgctggtgct gaccaccgcg gtcatcgcct
       61 gggccgaagt cgcgcggccg ctgagatttc tcaacattct cttcggcctg tggctgatcg
      121 tcgcaccact tttcctgggg ggcggaaccg ttgcgggcag ccttgtcgga atgatgctgg
      181 gcggtgcgct gatcctgctg agcctgccgc gcgggcgccg cagcgacgag cattacggaa
      241 gctgggacag attcatcgtc tgacggcatt gtcggaagtg gattgatccg gcgccggctg
      301 tcgggcctcc gccgaaggcg gtcgcgcggc gatccggatc gccgcgcgcc gatgggtccc
      361 gagaaccgac cccgccgcga cgaggatatg gcgggccttt cccgccaagg cggagcgatc
      421 cgccgagaag cggaaaaacc ttcttctgct cgcttgacct tccccctggt ggaaggatta
      481 gtttcgtctc agtcgagaag gatcgctgcc atgaccatcg gacctgtcgc ggatcagacg
      541 gaaggctcgt caggaccatc cgccatcgcg atcccgcgcc tggccgtcat ggctatgacc
      601 ggccggcctt ttgtcgcggt cgggccgagg ccgggcgggg ccggatgggc tttggcgggt
      661 cgatcaccaa atcgcgcata cgccacactg gcatttccgc cggccggagg ctagatacca
      721 gccatgcaat tgttcgcccg cctgattctg gtcgccctgc ttgccgcttt cgcggtcggc
      781 acggtcgcgc aggccgccgg gtcggcgggt atcgccaccg aaatggctgc ggccggtgtg
      841 gcgacctcgg acatggcgga ttgcgacgct tgcggcgatt ccggcgctgg cggcatggga
      901 cttgcctgcg aattcttctg cggggcgggc agtttttcgg ccgtcctggc gccgcaaacc
      961 gacaggtttg ccgaggcgac gggcagttcg ctctggcccg cggcagccca tgcccccagt
     1021 ggtgtcatcg ggacgcccgc caagcagcct ccaagaatcc tcgtctgatc cgacgcccgg
     1081 tgcatgactg catcggggcg ccttgtcgtg ccggcccgtg cgcctgtttc gatgcaaggc
     1141 cgaaccgtcg cccgctgccc tctgtcttcc ggcgaccaac ccgatgatca gcaagagatg
     1201 aacgatgact cgatttcccc atatgccgct ttcggccgcc tcacgatcgg cagcgacaag
     1261 ccggcattgt ttttccgacc cgtccagacg cggatttctg accgcatcgc tggcggcagc
     1321 cggccttctt cttctgccga cgtcgctgcg cgcggccgat cctgcgcgct cgtcgcttgc
     1381 ggcgctggca ttcgacggcg atgtgttgct ggccgcggga caagccctgg ttcgcagcga
     1441 tgacggcggc cagtcctggt cgccgctatc cggccccgcg cagatcctga cacttgcgac
     1501 gcatcctgaa cgaccgggcc ggatcctggc aggtctggct gccgacggca tcgcgctgtc
     1561 ggaagatggc ggcaggacat ggacaagccg cgcaaacgga ttgcccgcgg gcccgacgga
     1621 cgccctggcg atcgcggccg gccagcccga catgatctat gccgcgatcc gcggcgacgg
     1681 gctgtggaaa agcgaggatg ccggcgaaag ctggagcctt gccatggatc gtccctggct
     1741 ggacgaggcc gagcgggatc ttctgacgct cgcctcggtc gatcttgcca ccggcatggg
     1801 cgggatctgg atctatgccg gaaccgagaa ggggctgaca cgactgcccg attgcttctg
     1861 ccgctggcag gatgtccagc caggcaacgc gatggatgcc ctggtttccg gcgatgcccc
     1921 gccctccgaa gccccgcttc cggcgggcca gccgatccgg gcgctggtca gcgcggcttc
     1981 cgcaccccag accctctatg cagccctttc atcaggcgtc tggacctcgc gcgacgccgg
     2041 cgtggtctgg tcgcgccttg cgccgggtga cgcagtctcg gtggcggttc acccgaccaa
     2101 tcccgactac atctttgccg ccgtggacgg cggtctgaaa cagagccgcg acggcggcac
     2161 cacctggtcc gcgctggcgg ccatctgaag gacatcaaca tgaaaaacgt ttttgcattc
     2221 gccccgatag cagcccttgc agttgcaggc ggcatcgcct ttgccttgcc gtccttcgcg
     2281 caggaaacgg gttcggcggc cagcgccggc gcgccggcgg aagcggccgc gcagagcaag
     2341 cagctgacca tgtggcgcag tcccggctgc ggatgttgcg acgcctgggg cgcctatatg
     2401 gaaaaggccg gatacacggt cgagatcatc gacgaccgca acttcgacaa gacgtcggtt
     2461 tcggtgggcg tgccgcagca ggggctcggc tgccatctgg cgaaggtcgg cggctatttc
     2521 atcggcggtc tggtgccggc cgaggtggtc gaccgtctgc tggaggaaaa gcccgagatc
     2581 accggtatca ccctgcccgg aatgcccccc aacgcccccg gcatggcgaa gcagaagtcc
     2641 ggcacgctga gggtctattc cttcgggccc gagggcgtgg cagtctattc cgatgagtga
     2701 atgcatgggc ggaatgatga gcggcccgat gatgggaacg atgatggcg
//
LOCUS       DTVW01000068            1559 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1110857, whole
            genome shotgun sequence.
ACCESSION   DTVW01000068 DTVW01000000
VERSION     DTVW01000068.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1559)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1559)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1559
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1110857"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..362
                     /locus_tag="EYO87_00895"
     CDS             <1..362
                     /locus_tag="EYO87_00895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatA"
                     /protein_id="HIC64561.1"
                     /translation="YDAYYNRARKVRALIRRDFDNVHADGIDAILAPTTPSAAFALGE
                     MADADPVAMYLNDVFTVTLNLAGLPGISVPLGLDRKGLPLGLQLIGRPFEEGDLLNQA
                     LVLERAAGFVAKPERWW"
     gene            397..684
                     /locus_tag="EYO87_00900"
     CDS             397..684
                     /locus_tag="EYO87_00900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64562.1"
                     /translation="MRGWWVISVLALAGCGVNQGVNPNYQFGANAYGKYRATREVALV
                     SNGAGATTIPVARPFQAPTPAQIAGRNPVPVPPTMKAGGGLQIVRTAPAPR"
     gene            784..1356
                     /locus_tag="EYO87_00905"
     CDS             784..1356
                     /locus_tag="EYO87_00905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011746923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HIC64563.1"
                     /translation="MANATLARDRLCDPASDVSAHWLIDEAGRIEALVAEDRRAWHAG
                     AGAWRGRDDINSRSIGIEIANPGDRPFPAAQMDSLVLLLGGIMARWSLGPAAVIGHSD
                     MAPGRKIDPGPRFDWQRLAREGLALWPDGPGADAPLAGSLDALGYPPADPETRLAAFR
                     LRFRPWAKGPESAEDRMIAAALTTARLGAG"
BASE COUNT          239 a          522 c          539 g          259 t
ORIGIN      
        1 tctatgacgc ctactacaac cgcgcccgca aggtccgcgc gctgatcagg cgcgatttcg
       61 acaatgttca tgccgacggg atcgacgcga ttctcgcccc gacgacgccc agtgcagcct
      121 ttgccctggg cgagatggcc gatgccgatc cggtcgcgat gtatctcaac gacgtcttca
      181 cggtcacttt gaacctggcc gggctgccgg ggatttcggt tcctctcggg ctggacagga
      241 aggggctgcc gctggggctg caactgatcg gccgaccctt cgaagagggt gatctgctga
      301 atcaggcgct ggtcctggaa cgggcggcag gatttgtggc caagccggaa cgctggtggt
      361 aggcttgcgg caggtgagga tgcggatgga ggcgtcatgc gcggctggtg ggtgatttcg
      421 gtgctggcac tggccggctg tggcgtcaat cagggggtga acccgaacta tcagttcggc
      481 gcgaacgcct atggcaaata tcgcgcgacg cgcgaggtcg ccctggtctc gaatggcgcg
      541 ggcgcaacca cgatccccgt tgcgcggcct ttccaggcgc cgacacccgc ccagatcgcg
      601 ggccgcaatc cggtgccggt gccccccacg atgaaggccg gcggcggcct gcaaatcgtg
      661 cgcacggccc ccgcgccccg gtaaccgctg accgtgttgg cggatttggc gcgctgttcc
      721 agtcccaatc atggcgaccg gcgcggccat cggcccgaac tgatcgtgct gcattataca
      781 ggcatggcga acgcgacgct ggcccgcgac cggctttgtg atcccgcttc tgacgtcagc
      841 gcccactggc tgatcgacga ggccggccgc atcgaggcgc tggttgccga ggatcgccgc
      901 gcctggcatg ccggcgcggg cgcgtggcgc gggcgcgacg acatcaattc gcgcagcatc
      961 gggatcgaga tcgccaatcc cggcgaccgc ccctttcccg ccgcgcagat ggattcgctg
     1021 gttctgcttc tgggcgggat catggcgcgc tggagccttg gtccagccgc cgtgatcggc
     1081 cattcggaca tggcccccgg ccgcaagatc gaccccggcc cccgtttcga ctggcaacgg
     1141 ctggcgcgcg aagggctggc cctgtggccc gatggcccgg gcgcggatgc gcccctggca
     1201 ggcagtctcg atgcgcttgg ctatccgccg gccgaccccg aaacacgatt ggcagcgttc
     1261 cggctgcgat ttcgtccctg ggcaaaaggc ccggaaagcg ccgaggaccg aatgatcgcc
     1321 gccgccctga cgacagcgcg cctaggcgcc ggatgaatcg cgaaaagact gtggcgggcc
     1381 gcgattgcgg cacgatgcgg tttcatgctt cgctgaccga ccgcggatgc gggcggcgcc
     1441 acgccccgca atgacagcgt ctgccggatg cgggacgccg tggtcccgat caatcccgac
     1501 gatgcaccca ttgacgcgcg gcccgggcag gctgttcgag tcccattcgg cggccgcca
//
LOCUS       DTVW01000069            1839 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1111206, whole
            genome shotgun sequence.
ACCESSION   DTVW01000069 DTVW01000000
VERSION     DTVW01000069.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1839)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1839)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1839
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1111206"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..561)
                     /locus_tag="EYO87_00910"
     CDS             complement(<1..561)
                     /locus_tag="EYO87_00910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010391936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome segregation protein SMC"
                     /protein_id="HIC64564.1"
                     /translation="MRFDRLRLNGFKSFVDPTDLVIREGLTGVVGPNGCGKSNLLEAL
                     RWVMGENRPTAMRGAGMEDVIFAGTSRRSARGHAEVSLGVDNRDRLAPAGFNDEDHFD
                     IVRRITRDAGSAYKIGGKEVRARDVQMLFADASTGAHSPALVRQGQISELINAKPRSR
                     RRILEEAAGISGLYQRRHEAELKLNGA"
     gene            726..1100
                     /locus_tag="EYO87_00915"
     CDS             726..1100
                     /locus_tag="EYO87_00915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017927603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CidA/LrgA family protein"
                     /protein_id="HIC64565.1"
                     /translation="MIASLALILSFQLVGEIASRGLNLPLPGPVVGLLLLVGACIARP
                     GLARRIRPATQGLLQHLSLFFVPAGVGIVAHLQLLRQDGLGLALALAGSTILAIAAGA
                     LAFSWTARLTGSIDPAALKSDD"
     gene            1093..1812
                     /locus_tag="EYO87_00920"
     CDS             1093..1812
                     /locus_tag="EYO87_00920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010391940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LrgB family protein"
                     /protein_id="HIC64566.1"
                     /translation="MTDPLLIWSYLSEGPLLWLTATLAAYLIGDAVFRASRRKSWANP
                     VLVAIILLALLLWGTGTDYATYFEGAQFVHFMLGPATVALGLPLYDNLPRVRKAAWPM
                     LAGLLAGSSVAIVSALAIAKGFGIGGPVLASLAPKSTTAPVAIGIAERIGGQPTLTAA
                     LVLMTGIFGAIIVTPLLNALRIRDWRARGFSVGVAAHGIGTARAFQVNETAGAFSGIG
                     MGLNAVLTAIIAPLALRLFGG"
BASE COUNT          260 a          604 c          616 g          359 t
ORIGIN      
        1 ggccccgttc agcttcaatt cggcctcgtg gcggcgctgg tagaggccgc tgatcccggc
       61 cgcctcttca aggatccggc ggcggctcct gggtttggca ttgatcaatt cgctgatctg
      121 cccctgccgc accagcgccg gtgaatgcgc gccggtcgag gcgtcggcga acagcatctg
      181 cacgtcgcgc gcccgaacct ccttgccgcc gatcttgtag gcgctgcccg cgtcgcgcgt
      241 gatccggcgc acgatgtcga aatgatcctc gtcgttgaaa cccgccggtg ccagccggtc
      301 gcggttgtcc acgccaaggc tgacctcggc atgaccgcgg gccgaacggc gcgaggtgcc
      361 ggcgaagatg acgtcctcca ttccggcgcc gcgcatcgcg gtcggacggt tctcgcccat
      421 gacccaccgc agggcttcca gcaggttcga cttgccgcag ccattcggtc ccacgacacc
      481 ggtcagccct tcgcggatga ccagatcggt cgggtccacg aagcttttga agccgttgag
      541 tcggagccgg tcgaaacgca aggcgaaaat ccgtcagaat cgggtcagtc tagcggattg
      601 ttccgtcctt gaccctacaa gtcaacatca gccgctatat gtggaattat tgcaccactt
      661 atccacaaga tgagtgttcc agaaaggcac tggcgcggcc tgcgcggcgg cgctagcgtc
      721 gggccatgat cgcatcgctt gccctgatcc tgtccttcca gcttgtcggc gaaatcgcct
      781 cgcgcggtct gaatctgcca ttgccgggtc cggtcgtcgg tctgctgctg ctggtcggcg
      841 cctgcatcgc gcggccggga ctggcgcggc ggatccggcc cgccacgcag gggttgctgc
      901 aacatctgtc gctgttcttc gttccggcag gcgtcgggat cgtggcgcat ctgcaattgc
      961 tgcgccagga cgggctgggg ctggcgctgg cgctggccgg ctcgaccatt ctggcgatcg
     1021 cggcgggggc gctggcgttt tcctggacgg cgcggctgac aggctcgatc gaccctgcgg
     1081 cgctgaaaag cgatgactga tccgctgctg atctggtcct acctgtcgga aggcccgctg
     1141 ctgtggctga ccgcgaccct ggccgcctat ctgatcggag atgctgtctt tcgtgcaagc
     1201 cgccggaaaa gctgggcgaa tccggttctg gtggcaatca tcctgctggc gctgctgcta
     1261 tgggggaccg ggacggatta cgccacctat ttcgaaggcg cgcaattcgt ccatttcatg
     1321 ctggggccgg cgaccgtagc cctgggcctg ccgctctatg acaatctgcc gcgtgtgcgc
     1381 aaggccgcct ggccgatgct ggcgggactg ctggcggggt cctcggtcgc gatcgtctcg
     1441 gcgttggcga ttgccaaggg cttcggaatc gggggacctg tcctggcctc tctggcgccg
     1501 aaatcaacca cggcgccggt cgccatcggc atcgccgaac ggatcggcgg ccagcccacg
     1561 ctgaccgccg cgctggtcct gatgacgggc atcttcggcg cgatcatcgt cacgccgttg
     1621 ctgaatgcgc tgcggatcag ggactggcgt gcaaggggct tttcggtcgg cgtggcggcg
     1681 cacggcatcg gcaccgcccg cgccttccag gtgaacgaga cggcgggtgc cttttccggt
     1741 atcggcatgg gattgaacgc ggttctgacc gcgatcatcg cgccgctggc gctgcggctg
     1801 ttcggcggct gagaactgcc gcatccgccg gcctctccc
//
LOCUS       DTVW01000070            3481 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1111994, whole
            genome shotgun sequence.
ACCESSION   DTVW01000070 DTVW01000000
VERSION     DTVW01000070.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3481)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3481)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3481
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1111994"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..140)
                     /locus_tag="EYO87_00925"
     CDS             complement(<1..140)
                     /locus_tag="EYO87_00925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020041418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redoxin domain-containing protein"
                     /protein_id="HIC64567.1"
                     /translation="MAVSPPVCDFGAPWHDFTLPDPDGKAVSLADIEGSKGTLVMFIC
                     NH"
     gene            complement(372..1979)
                     /locus_tag="EYO87_00930"
     CDS             complement(372..1979)
                     /locus_tag="EYO87_00930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013068326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multifunctional 2',3'-cyclic-nucleotide
                     2'-phosphodiesterase/5'-nucleotidase/3'-nucleotidase"
                     /protein_id="HIC64568.1"
                     /translation="MALRLFTAASIAALMAGSAQAEMVLHVLHTNDLHNRIEPINKYD
                     STCDQETQDAGECFGGVARVAAKVRELRDKITSEGGNVVVLDAGDQYQGSLFYTTYKG
                     TDVAEFMTDIGYDAMSVGNHEFDDGPEGLAVLADGVEFPISSGNLDLSQSNVLKSRID
                     DTVTLDVGGQKIGIVSALATDTPEISSPGPDVIVTDDIEALKADVKTLTDQGVNKIIA
                     LTHVGYLRDQEIAREVPGIDAIIGGHSHTLLGEGEDAAGPYPTMVSGPDGVEVPVATA
                     ASYSRYLGHLILTFDDEGKLIKAEGKPILLDSSVPEDETIVARVKEMAAPIEELRQKV
                     VAETAAPIDGDRINCRARECEMGDLVADAMLDRVKNQGMSIAIANGGGLRASIAQGQV
                     TMGDVYSVLPFQNTLATFRLKGADVVSALENGASKYEEGAGRFAQVAGLKYTVDPSAE
                     AGSRISEVMVRKDGGWSPIDPAATYGVVSNNYMRAGGDGYSVFAANATDAYDFGPDLA
                     QVLADYLAAQGAEYKPAMDGRITVKGE"
     gene            2142..2477
                     /locus_tag="EYO87_00935"
     CDS             2142..2477
                     /locus_tag="EYO87_00935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009573096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF952 domain-containing protein"
                     /protein_id="HIC64569.1"
                     /translation="MRIYKILRLEEWATLRTSGRSAGASVDVLDGFVHFSASGQVKAT
                     LNKHFRKDSELMLLACESDAMGDCLRWEPARGGDMFPHLYRDLLLSDVIWTRLILPGT
                     DGHDVGILE"
     gene            2474..>3481
                     /locus_tag="EYO87_00940"
     CDS             2474..>3481
                     /locus_tag="EYO87_00940"
                     /EC_number="1.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinone-dependent dihydroorotate dehydrogenase"
                     /protein_id="HIC64570.1"
                     /translation="MSMVEKLGLAFLHRLDPERAHDLSIRALATGLAPLPGRPVTSDR
                     LRLEMAGLDLANPIGLAAGFDKNARAVSALMKAGFGFIELGAATPRAQPGNRRPRLFR
                     LAEDRAIINRFGFNNDGAAAIAARLEARPRGIPAGLNIGANKDSTDRAADFAEVVRIA
                     GGTADFLTVNVSSPNTERLRELQGPRALEALLDGVMRARDALTVRRPVFVKIAPDLDR
                     TALSDIAHVARNLRVDAIIATNTTLSREGLRSRQAGEAGGLSGKPLLARSTEVLAQLY
                     RETHRELPLIGVGGIFSADDAWAKLRAGATAVQLYSALIFQGFSLAGRMAEELDLRLR
                     RE"
BASE COUNT          671 a         1071 c         1026 g          713 t
ORIGIN      
        1 caatggttgc agatgaacat gaccagcgtg cccttcgagc cctcgatatc agccagggaa
       61 acagccttgc catcgggatc gggtagcgtg aaatcatgcc acggcgcacc gaaatcgcaa
      121 accggagggg aaaccgccat tgaagtctcc ttgctttttt atggcgaatg tcgcggatcg
      181 gcgaccggca agcaagccgg ttcaaactgc cagcgaccat ccgcagtgtc cggtatcaat
      241 accaaattgt tccataatac cgattatcgg gacgaagtgt gctccggttg ttggagtcac
      301 ggaattttcc aaccatctcg tcctcgtgcc gagaatggcc ctcgtttgag gtcgtttgcg
      361 tttcgcaccg ctcattcccc cttgacggtg atgcggccgt ccatggcggg cttgtattcc
      421 gcaccttggg ccgcaagata gtcagccagg acctgtgcca gatcaggacc gaaatcatag
      481 gcatcggtcg cgttcgccgc gaagaccgaa tacccatccc cgcctgcgcg catgtagttg
      541 ttcgatacca cgccataggt cgcggcggga tcgattgggc tccatccgcc atctttgcgg
      601 accatcactt cgctgatccg actacccgcc tcggccgatg gatcaacagt atatttgaga
      661 ccggcgacct gtgcaaagcg accggcgcct tcctcatatt tgctggcgcc gttttccaag
      721 gcagagacca cgtcggcacc cttcagacga aatgttgcca gcgtattctg gaaaggcagt
      781 acggaataga cgtcgcccat cgtcacctgc ccttgggcga tcgaggcacg caggccgccg
      841 ccattggcga tcgcgatgct catgccctga ttcttgaccc gatccagcat cgcatcagcc
      901 accagatcgc ccatttcgca ttcccgcgcc cgacaattga tgcggtctcc gtcgatgggc
      961 gccgcggtct cggcgacgac cttctggcgc agttcctcga tcggcgcggc catttccttg
     1021 acgcgagcga cgatcgtctc gtcctcggga acggaactat ccagaaggat cggcttgccc
     1081 tcggccttga tcaacttgcc ttcgtcatcg aacgtcagaa taagatggcc aagatatctg
     1141 gaatacgagg cggcagtcgc aacaggaacc tcgacgccat cggggcccga gaccatggtc
     1201 ggatagggtc cggctgcgtc ctccccctcg cccagtaggg tgtgggaatg accgccgatg
     1261 atggcatcga tgcccggcac ctctctggca atttcctgat cgcgcagata accgacatgg
     1321 gtcagcgcga tgatcttgtt cacaccctgg tcggtcagcg tcttcacatc ggctttcaac
     1381 gcctcgatat cgtcagtgac gataacatcg ggaccgggcg acgaaatttc tggcgtatcg
     1441 gtcgccagcg ccgagacaat accgatcttc tggccaccca catccagcgt caccgtgtcg
     1501 tcgatcctgc ttttcaacac atttgactgc gaaaggtcca ggttgccgga ggaaatcgga
     1561 aattccacgc catcggccag gactgccagc ccttcgggac cgtcatcgaa ttcatgattg
     1621 ccgacggaca tcgcgtcata gccgatatcg gtcatgaact ctgccacgtc cgtgcccttg
     1681 taggtcgtgt aaaacaggct gccctgatac tgatcgcccg catccagcac gaccacattg
     1741 ccaccctccg aggtgatctt gtcacgcagt tccctgactt ttgccgccac gcgcgcgacc
     1801 ccgccgaaac actcgcccgc atcttgcgtc tcttggtcac aggtgctgtc atatttgttg
     1861 atcggttcga tccgattgtg cagatcgttg gtatgcagca catgcagcac catttcagcc
     1921 tgcgccgatc ccgccatcag cgcggcgatc gatgcggcgg taaacaaacg aagcgccatg
     1981 tgattcccct tccggccctg ttggtctgac tgcgccagag tggcgcagcg tccgcgcggg
     2041 gtcaaatctt cccgacgctg ccatcgcagg aaaagttgtc aagcaggttg cagaacgcgg
     2101 ccgggcttga ccttgtgcgg agaggtgccg caaatgccgc catgcggatc tacaagatac
     2161 tgaggctgga agaatgggcc acgcttagaa cgtccggacg cagcgccggc gcttccgttg
     2221 atgtgttgga tggcttcgtg catttttccg cttcgggcca ggtcaaggcg acgctgaata
     2281 aacatttccg caaagatagc gagctgatgc ttctggcatg tgaatcggat gcgatgggcg
     2341 attgcctgcg gtgggagcct gcacgcggcg gcgacatgtt cccgcatctc taccgggacc
     2401 tgttgttgtc ggacgtgatc tggacacgtc tgatcctgcc gggcacggat ggtcatgacg
     2461 tcggaattct ggaatgagca tggtcgagaa gctgggtctt gccttcctgc accggctgga
     2521 tccggaacgc gcacatgacc tttcgatccg ggcgctggcg accggattgg cgcccctgcc
     2581 cggccggcct gtcacgtcgg acaggttgag gcttgaaatg gcgggtctgg atcttgccaa
     2641 tccgatcggt ctggcggcag gtttcgacaa gaatgcccgc gcagtgtcag cgctgatgaa
     2701 agctggtttc ggcttcattg aacttggcgc cgccacgccg cgcgcgcaac ccgggaatcg
     2761 caggccgcgg ctgtttcgcc ttgccgaaga tcgcgcgatc atcaaccggt tcgggttcaa
     2821 caacgacggc gcagcggcca tcgccgcgcg actggaagcc agaccacggg gcattccagc
     2881 gggattgaat atcggagcga acaaggacag caccgatcgc gctgcggatt tcgcagaagt
     2941 ggtccgcatc gcgggcggga ccgccgactt cctgaccgtc aatgtctcat cgccaaacac
     3001 ggaacgtctt cgcgaattgc aaggccccag ggcgctggag gcgttgctgg acggagtgat
     3061 gcgggcccgc gatgccctga ccgtgcgacg gcccgtcttc gtcaagatcg cgccggatct
     3121 ggatcgaacg gcgctttcgg acatcgccca cgtggcacgg aacctgcggg tcgatgcgat
     3181 catcgccacc aacacgactc tgtctcgcga aggtttgcgc agccgccagg ccggggaggc
     3241 cggcggtttg tcgggaaagc cccttctcgc gcgatcgacc gaagtcctgg cacagctcta
     3301 tcgggaaact caccgagagt tgccgctgat cggcgtcggc ggcatatttt ccgccgacga
     3361 cgcatgggcc aagctgcgcg caggtgcaac ggcggtgcaa ctctattccg ctttgatctt
     3421 tcagggattt tctctggcag gacggatggc agaagagctt gacctgcgcc tgcggcgcga
     3481 g
//
LOCUS       DTVW01000071            2983 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1112603, whole
            genome shotgun sequence.
ACCESSION   DTVW01000071 DTVW01000000
VERSION     DTVW01000071.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2983)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2983)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2983
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1112603"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            1463..2905
                     /locus_tag="EYO87_00945"
     CDS             1463..2905
                     /locus_tag="EYO87_00945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64571.1"
                     /translation="MSDTITMERPAAATDLTPSQKTFVDAITSKVGTLLGSQLPGTFA
                     AVSYPPGFHPVVQYGNNAYYNSTMLDTFNGTLAVGSNGMLTLGNEQFSTLYARILNAA
                     QYQFSAADQKIVNDPAYDNQKIAITNEASSGGFAAAYAVSPVTFTGVLAALLKNFSKD
                     PTDHSLANIATAARQLASAGFPGLAAAFSNNINMLAPLIRITGEQAAAELQLAAAREN
                     ATNPTAANGGLQTTDSTYYVGWTPMPSNTVIQAGLDSGSKVSIEVSASNFSSTDASLS
                     IAGKTGFTIPVLDVVDIGISAGSSYDWSKHTSSSSSFDMTIEYPGVTIVQIDPLTLSA
                     DNTTGWYDESLLRSIVTGSGDDSVSGFKIAPTDQYAPARMFGQGKPFSRLKTLVISQA
                     PTITMVFSADMANSVTSSFKENASVDVKLFGIFSVGSFNESYGITKVDRDSASGKVTV
                     VFAPPKVIGTVPPTQQVANVLGGVADYPPA"
BASE COUNT          521 a          978 c          958 g          526 t
ORIGIN      
        1 cgggcgccgc ggcgaccctg accgacatgt cggccttcac ggtgacgatc accttctcgg
       61 aaccggttgt cgggttcgaa accggcgacg tgaccgtttc cggcgggacg gtgaccgcgt
      121 tttcggggac cggcgccgtc taccgtgccg ggatcacgcc cggcgcggtt gcggaggtca
      181 cgatcggcgt ccgcgcgggc gttgccgagg atctggcgac caacccgaat ctggcggcgg
      241 cgccgctgac ggtcctgccc gacacctcgc gcatcgcgca ggaggcgatc acggacgccc
      301 tgaccgcccg tggccgcgcc ctgatcggtg cccagccgga tttgcgcggc ttcctgaccg
      361 gctcggcagc ttcggggctc gaggcgcggg caagccgggg gcagggcaac ttccgcatcg
      421 gggccggggg acaggacagc actttctggg cgctggctca gggacggtgg tctgattccg
      481 tttcgacgga aatggactat tatcaccttg ccctcggtgc gcatctcctg cgcggaaaga
      541 acctgatcgt cggggccatg ttgcaattcg acagcgccga tgcgggtctt gacgccggtt
      601 ccttcgaggg acggggctgg ctggccggcc cgtatctggt ggcgcgactg cccgatcagc
      661 cgctttatct ttcggcctcg atcctgcatg ggcggagcga taacaccctg acacttgcgg
      721 gtcaggcacc ggatgatttt tcgtccaccc ggacattgct gacggccggc gtggaaggcc
      781 gattcgcgtg gaccgagacg acaacgatca tcccctcgct cgatctgtcg catctggtcg
      841 atcggcagaa acgctatgtc gacagccggg gcaatacggt cggtgcgcaa agcattcgac
      901 tgaccgaagc ggccttcggg ctgggcttcg agcatctggt gaggcttgac gacaacgaga
      961 tgcttctgag cggaggcatc agcgggatct tttcggatca gcaggccccg ggcgacacgg
     1021 cgaccagcac ccgcgggcgc atcgacctgg gcgccgagtt tcgcctgggc gaagcgtcga
     1081 gcctgagcct gaccacgttc tatgacggtc tcggcgatac cggctacggg gcaagggggg
     1141 cggcgctgga tttcgagatg cggttctaga accatcatcg gctgcccgga tcgacaagcg
     1201 gccgggcaga ttgcgcgcgc cgccggtatc cctggcgcgc ggcgcgccat gtcatcggca
     1261 ccggcctgcg cgccggtgct tttttcgggc ttcgtgttct ggcgcacagt gcgagtcggt
     1321 cgggcgggat acaacaaggg cgcgagttcc ggtgcggacc ggcacccgcc accctcccgt
     1381 ctcgggccct ggccggatct ttcagcgagg gtgccttttt cacctcctgc cgaaaggcgg
     1441 gactccatca aggaacagat ccatgtccga caccatcaca atggaacgcc cggccgcagc
     1501 caccgacctg acgcccagtc aaaagacatt cgtcgatgcg atcacgtcca aggtgggcac
     1561 gcttctgggc agccagttgc ccggaacctt tgctgccgtc agctatcctc cgggctttca
     1621 cccggtcgtg caatatggca acaacgccta ctacaattcc accatgctcg acacgttcaa
     1681 cggcacgttg gcggtcggca gcaacgggat gctgacgctg ggcaacgagc agttcagcac
     1741 gctttatgcg cgcatcctga acgcggcgca gtaccagttc tcggcggccg atcagaagat
     1801 cgtcaacgac cccgcctatg acaaccagaa gatcgccatc accaacgagg cgtcgtcggg
     1861 tggcttcgcg gcggcctacg ccgtttcgcc ggtcacgttc accggcgtcc tggcggcgct
     1921 gctgaagaac ttcagcaagg accccaccga tcattccctg gccaatatcg cgaccgcggc
     1981 gcggcagttg gcctcggccg ggtttccggg cctggcggcg gcattctcga acaatatcaa
     2041 catgctggca ccgcttatcc ggatcaccgg agaacaggct gcggcagagc tgcaactggc
     2101 cgcggcccgg gaaaacgcca ccaatcccac ggcggcgaat ggcggactgc agacgaccga
     2161 cagcacctat tatgtcggct ggacgccgat gccgtccaat acggtgatcc aggccggtct
     2221 cgacagcggc agcaaggtat cgatcgaggt ctcggcctcg aatttctcgt ccaccgacgc
     2281 cagcctgtcg atcgcgggaa agaccggctt caccatcccg gtgctggatg tggtcgatat
     2341 cggcatctcg gccgggtcca gctatgactg gtccaagcat acctcgtcct cgtcctcctt
     2401 cgacatgacg atcgaatatc ccggcgtgac catcgtccag atcgatcccc tgacgctgag
     2461 cgccgacaac acgaccggct ggtatgacga atcgctgctg cgttcgatcg tgacgggatc
     2521 gggcgacgac agcgtgtcgg gcttcaagat cgcgccgacg gaccaatatg ccccggccag
     2581 gatgttcggc cagggcaagc cgttctcgcg gctgaagacc ctggtgatca gccaggcgcc
     2641 caccatcacc atggtgtttt cggccgacat ggccaattcg gtcacgtcct cgttcaagga
     2701 aaatgcctcg gtggatgtga agctgttcgg gatcttctcg gtcgggtcgt tcaacgaaag
     2761 ctacggcatc accaaggtcg acagggacag cgcctcgggc aaggtcaccg tagtcttcgc
     2821 gccgcccaag gtcatcggta ccgtgccgcc cacccagcag gttgccaacg ttctgggcgg
     2881 cgtcgccgat tatccgccgg cctgaagccg agatgccgaa ccgcgcctga agcgggcgca
     2941 tgacggacac gaaccggggc ggtccgcgat ggccgcccct ccc
//
LOCUS       DTVW01000072            1143 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1114980, whole
            genome shotgun sequence.
ACCESSION   DTVW01000072 DTVW01000000
VERSION     DTVW01000072.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1143)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1143)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1143
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1114980"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1143)
                     /locus_tag="EYO87_00950"
     CDS             complement(<1..>1143)
                     /locus_tag="EYO87_00950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase M3"
                     /protein_id="HIC64572.1"
                     /translation="AAARERGLAGQVVTLNRSLIVPFLEHAEERTLREVAFRAWTARG
                     SGQGAGGTATDKLPLAAEILALRHERARLLGYEDFATFKLQPEMATTPDRVQDLLGQV
                     WRAARARAAEDETALTAMLRDDGVNGALEPWDWRLYAQRRRRREHDVDAATVGPYLTL
                     EAMLGAVFDVAGRLFGLEFQPVDAPLWSADVRAWKVTREGRLMAIFLGDYFARPGKRS
                     GAWCSSLQVQHRIGSGQRAIVVNVCNFTPPEEAGAPAFLSWDDAHTLFHEFGHATHHI
                     LSEVTWPSISGTSVAQDFVELPSQLYEHWLEQPEVLDAHARHHETGEPLPAGLRDRLL
                     AADRADAGFSTTEYLESALVDLAFHRGAPPDDVMARQAELLAGLQAP"
BASE COUNT          184 a          410 c          376 g          173 t
ORIGIN      
        1 cggggcctgc agccccgcca gcagttcggc ctgccgcgcc atcacgtcgt cgggcggcgc
       61 gccgcgatgg aaggccaggt cgaccagcgc gctttccaga tattcggtgg tcgagaagcc
      121 ggcatcggcc ctgtccgccg ccagcaatcg gtcgcgcagg ccggcgggca agggttcgcc
      181 cgtctcgtgg tggcgggcat gggcatccag cacctcgggc tgttccagcc agtgttcgta
      241 aagctggctg ggcaattcga cgaaatcctg cgcgacagaa gtgcccgaga tcgagggcca
      301 agtcacttcc gacaggatgt gatgggtcgc atggccgaat tcgtggaaca gggtatgcgc
      361 gtcatcccat gacaggaagg cgggcgcgcc cgcttcctcg ggcggcgtga agttgcagac
      421 attgacgacg atggcgcgct ggcccgaccc gatccgatgc tggacctgca aggacgaaca
      481 ccacgccccc gaccgcttgc ccggccgcgc gaaatagtcg cccagaaaga tcgccatcag
      541 ccggccctcg cgcgtgactt tccatgcccg cacatcggct gaccagagcg gcgcgtcgac
      601 cggctgaaat tccagcccga agaggcgccc ggccacgtcg aagacggcgc ccagcatcgc
      661 ctccagcgtc agatacgggc cgaccgtcgc ggcatcgaca tcgtgttccc gccggcgccg
      721 cctttgtgca tagagccgcc agtcccaggg ctccagcgcg ccgttcacgc cgtcgtcacg
      781 cagcatcgcg gtcagcgcgg tctcgtcctc ggcggcgcgc gcgcgggccg cccgccagac
      841 ctgtcccagc agatcctgaa ccctgtcggg cgtggtggcc atttccggct gaagcttgaa
      901 ggtcgcgaaa tcctcgtagc ccagcaatcg cgcgcgctca tggcgcagcg ccaggatctc
      961 ggcggccagc ggcagtttgt cggtcgcggt cccgcctgcg ccctgccccg atccgcgcgc
     1021 ggtccaggcc cggaacgcca cttcacgcaa tgtgcgctcc tcggcatgtt cgagaaacgg
     1081 cacgatcagc gagcggttca gcgtcacgac ctgcccggca aggccgcgct ctctggctgc
     1141 cgc
//
LOCUS       DTVW01000073            3494 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1117272, whole
            genome shotgun sequence.
ACCESSION   DTVW01000073 DTVW01000000
VERSION     DTVW01000073.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3494)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3494)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3494
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1117272"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1008)
                     /locus_tag="EYO87_00955"
     CDS             complement(<1..1008)
                     /locus_tag="EYO87_00955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_384304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter substrate-binding
                     protein"
                     /protein_id="HIC64573.1"
                     /translation="MTRMLRLGLLTSALLAGAASAQDATLTIESWRNDDLQIWQDTII
                     PAFEEANPGIKVNFAPSAPAEYNAVLNSKLDAGSAGDLITCRPFDASLELFKKGQLAD
                     LSDLASMANFSDVAKSAWQTDDGASTFCVPMASVIHGFIYNKTAFEELDLTPPETVDE
                     FYAVLDKIKEDGSYIPMAMGTADQWEAATMGYQNIGPSYWKGEEGRKALIEGGQKLTD
                     EGWVEPFRQLARWKDYLGDGFEAQTYPDSQNLFTLGRAAIYPAGSWEIGVFTPQIGGA
                     FEMGAFPPPVPAAGDGCYISDHTDIAMGMNTKTRYPEAAKTFLEWVGSPEFATLYANA
                     LP"
     gene            1215..2054
                     /locus_tag="EYO87_00960"
     CDS             1215..2054
                     /locus_tag="EYO87_00960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase"
                     /protein_id="HIC64574.1"
                     /translation="MALFLGIDGGGTGCRAALADADGTVIGRGTGGPANINTDVQGAA
                     ANILSATAQALEGSGARASDLIAALGLAGGAMRTAGDRLAGLLPFARMQIVNDGITAA
                     RGALGSQDGILAALGTGSVFAIQRGGTIRQVGGRGFLMGDEGSGAVLGRCLLADAMRA
                     ADGLLPMTPLLRDMLDQFGGIEGIIAFGNTARPADFGALAPRIVTSDDPAASRIFGAA
                     IARIREILTTLQAGDSLPVVFLGGLGPHYAARLGDPWPVKAAIGNSLDGAVLMARQMA
                     GAA"
     gene            2051..2830
                     /locus_tag="EYO87_00965"
     CDS             2051..2830
                     /locus_tag="EYO87_00965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HIC64575.1"
                     /translation="MSDLFQPGQFDDGAAGPRYLQLHRRIAEAIASGRLQPGDSLPPE
                     REMAAMTGLSRVTIRKGIEALVGSGQLIQRRGSGTIVAPRVERLEQALSLLTSFTEDM
                     ARRGRQIDSRWLARGLHSPSPEEVMALGLATGDRVARLERVRVSDGVPLAVEMASLPA
                     TILPDPESVQTSLYALLESRGQRPLRAVQRISAANLGRRDADLLGVAPGVAGLRIERV
                     AYLASGAVVEFTRSLYRGDAYDFAVELKMHPDSDRAERTSR"
     gene            2827..>3494
                     /locus_tag="EYO87_00970"
     CDS             2827..>3494
                     /locus_tag="EYO87_00970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIS domain-containing protein"
                     /protein_id="HIC64576.1"
                     /translation="MSQSNMAREVAEIPDAAARFLAQSHEAVVAAADVLRARDPAVIA
                     TIARGSSDHAATYLKYAVELVAGIPVASVGPSIASIYGRPLRLPRGACIGISQSGRSP
                     DIVEMVQTATAGGALSIAITNHADSPMAAASAHCLPLAAGEEKSVAATKTFVNSVLAG
                     LSLLAEWQRDRALQDAIAASPQALARAVALDWSPLVDRLTGASRCFVLGRGPAIAIAN
                     EAAL"
BASE COUNT          534 a         1201 c         1167 g          592 t
ORIGIN      
        1 cggcagcgca ttggcataga gcgtggcgaa ttcaggcgaa ccgacccatt cgagaaaggt
       61 tttggccgcc tcgggatacc tggtcttggt gttcatgccc atggcgatgt cggtgtgatc
      121 gctgatataa cagccatcgc ccgcggccgg caccggcggc ggaaaggccc ccatctcgaa
      181 cgcgcctccg atttgcgggg tgaagacgcc gatctcccag cttcccgcag gatagatcgc
      241 ggcgcggccc agcgtgaaca ggttctggct gtcgggatag gtctgcgcct cgaacccgtc
      301 gcccagataa tccttccacc tggccaattg ccggaacggc tcgacccagc cctcgtcggt
      361 cagcttctgg ccgccctcga tcagcgcctt gcggccctct tcgcccttcc agtagctggg
      421 accgatattc tgatagccca tggtcgcggc ttcccactga tcggcggtgc ccatcgccat
      481 cgggatatag ctgccgtctt ccttgatctt gtccagaacg gcatagaatt catccaccgt
      541 ctccggcggc gtcaggtcca gttcctcgaa agcggtcttg ttgtagatga aaccgtgaat
      601 gaccgaggcc atcggcacgc agaaggtcga ggcgccgtca tccgtctgcc aggccgattt
      661 cgccacgtcc gagaaattcg ccatcgaggc cagatcgctc agatccgcca actgcccctt
      721 cttgaacaat tccagcgagg cgtcgaaggg gcggcaggtg atcagatcgc cggccgaacc
      781 cgcatccagc ttggaattca gcaccgcgtt gtattccgcc ggcgcgctcg gcgcaaaatt
      841 gaccttgatg cccggattgg cctcctcgaa ggccggaatg atggtgtcct gccagatctg
      901 caggtcgtcg ttgcgccagc tttcgatggt cagcgtcgcg tcctgcgccg aggcggcgcc
      961 ggccagcagg gcgctggtca gcagcccgag gcgaagcatt ctcgtcatga aaaatctccc
     1021 tggttgaagg ccgcgtgcgg tcgcgacgcg gcatgtccgg tcgaatccgg cttctggtgt
     1081 tgcatgatgc caaagcaata ccaattgtaa accccctgaa tcaatccggc tttgaaatgg
     1141 gcggaaacag cccgattcag tttcgtcttt tcatttggta ttgctttggt attctgcgca
     1201 gcgaggaggc ccgaatggcg ctgtttctgg gaatcgatgg cggtggaacc ggctgccgcg
     1261 cggcgctggc cgatgcggac ggcaccgtta tcgggcgtgg aaccggcggg cctgccaata
     1321 tcaataccga tgttcagggc gcggcggcca acatcctgtc agccacggcc caggcgctgg
     1381 agggcagcgg cgcgcgggcc tcggacctga tcgcggccct gggcctggcg ggcggcgcga
     1441 tgcggacggc gggtgaccga ctggcgggcc ttctgccctt cgcccggatg cagatcgtca
     1501 acgacggcat caccgccgcg cgcggcgccc ttggatcgca ggacggcatc cttgccgcgc
     1561 ttggcaccgg atcggttttc gcgatccagc gcggcggcac catccggcag gtcggcggcc
     1621 gcggctttct gatgggcgac gagggcagcg gcgcggtgct gggccgctgc ctgctggccg
     1681 atgcgatgcg cgccgccgac ggcttgctgc cgatgacgcc gctgctgcgc gacatgctgg
     1741 accagttcgg cggcatcgag ggcatcatcg ccttcggcaa caccgcgcgt ccagccgatt
     1801 tcggtgcgct ggcgccgcgc atcgtcacat ccgacgaccc cgccgccagc cgcatcttcg
     1861 gcgcggccat cgcccggatc cgcgaaatcc tgaccaccct gcaagccggc gacagcctgc
     1921 ccgtcgtctt cctgggcggg ctggggccgc attacgccgc gcgcctcggc gacccctggc
     1981 cggtcaaggc agccatcggc aacagtcttg acggcgcggt gctgatggcg cggcagatgg
     2041 cgggcgcggc atgagcgatc ttttccagcc cggccagttc gatgacggcg cggccggccc
     2101 gcgctatctg caactgcacc ggcgcatcgc cgaggccatc gcctcgggcc gcctgcaacc
     2161 cggcgacagc ctgccgcccg aacgcgagat ggcggcgatg accggcctct cgcgcgtcac
     2221 catccgcaag gggatcgagg cgctggtcgg ctcgggccaa ctgatccagc ggcgcggatc
     2281 gggcaccatc gtcgcgcccc gcgtcgaacg gctggaacag gcgctgtcgc tgctgacctc
     2341 gttcaccgag gacatggccc ggcgcggccg gcagatcgac agccgctggc tggcgcgcgg
     2401 gctgcattcg cccagccccg aagaggtgat ggcgcttggc cttgccacgg gcgaccgcgt
     2461 cgcgcggctg gaacgggtgc gggtttcgga cggcgtgccg ctggcggtgg aaatggcctc
     2521 gttgccggcc acgatcctgc ccgaccccga atcggtccag acctcgcttt acgccttgct
     2581 ggaatcgcgc gggcagcgcc cgctgcgcgc ggtccagcgc atctcggccg ccaatctcgg
     2641 ccgccgcgac gccgacctgc tgggcgtcgc ccccggcgtc gccggcctgc ggatcgaacg
     2701 cgtggcctat ctggcctcgg gcgcggtggt cgaattcacc cgctcgctct atcgcggcga
     2761 cgcctatgat ttcgcggtgg agctgaagat gcatcccgat agcgacagag ccgagaggac
     2821 cagcagatga gccaaagcaa catggcccgc gaagtggccg aaatccccga tgcggccgcc
     2881 cgctttctgg cgcaatcgca cgaggccgtg gtcgccgccg ccgatgtctt gcgcgcccgc
     2941 gatccggcgg tgatcgcgac catcgcgcgc ggatcgtcgg atcacgcggc gacctatctg
     3001 aaatacgcgg tcgagctggt ggcggggata cccgtggcct ctgtcggacc ctcgatcgcc
     3061 tcgatctatg gccggccgct gcgcctgccc cgcggcgcct gtatcggcat ctcgcaatcg
     3121 ggccgcagcc ccgacatcgt cgagatggtg cagacggcca cggcgggcgg cgcgctgtcg
     3181 atcgcgatca ccaatcacgc tgacagcccg atggccgccg catcggccca ttgcctgccg
     3241 ctggcagcgg gcgaggaaaa aagcgtcgcc gccaccaaga ccttcgtcaa ttcggtgctg
     3301 gcgggcctgt cgctcttggc ggaatggcag cgggaccgcg ccctgcaaga cgccatcgcg
     3361 gcatcgcccc aggctctggc gcgggcggtg gcgctggact ggtcgccact ggtcgaccgg
     3421 ctgaccgggg ccagccggtg cttcgttctg ggccgcggcc cggccatcgc catcgccaac
     3481 gaggccgcgc tgaa
//
LOCUS       DTVW01000074            2412 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1117959, whole
            genome shotgun sequence.
ACCESSION   DTVW01000074 DTVW01000000
VERSION     DTVW01000074.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2412)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2412)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2412
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1117959"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..744)
                     /gene="uxuA"
                     /locus_tag="EYO87_00975"
     CDS             complement(<1..744)
                     /gene="uxuA"
                     /locus_tag="EYO87_00975"
                     /EC_number="4.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannonate dehydratase"
                     /protein_id="HIC64577.1"
                     /translation="MRQTWRWFGPQDRVSIDDMLQAGVRGVVSALHHIPTGETWLPDE
                     IARRQAQIAAMRDGTPSGLAWEVVESLPVSEAIKTQSGDWRAHVTNWIASMRHLRDAG
                     IEVLCYNFMPVLDWTRTDLSWPRPSGARCMRFDFTDFAVFDIHILQRQGAARDVPEHV
                     RDEAARRFADMDEARRQQLAGNVVFGLPGAAERFSLQDVRDLLDSYAPVTDAVLRRNF
                     HDFLEQVAPVAQEIGMRLCCHPDDPPFALL"
     gene            complement(803..1510)
                     /locus_tag="EYO87_00980"
     CDS             complement(803..1510)
                     /locus_tag="EYO87_00980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019963600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HIC64578.1"
                     /translation="MTPPASPANVALPALDEARPPSVTDQVYDALYERVIDLTLPPGA
                     RLSEAEVATQMGVSRQPVRDAFYRLSQMGFILIRPQRATVVTQISEQAIRQAHFIRNA
                     LEIATAREAALRLTPDQHRALDDLIARQDAAIAADDRSGFHALDDRFHHDICAFIGRE
                     VVWTLIKENKGHMDRARYLSLSYNAQNAMQEHRVILRALRDRDPDAAAAAVTDHLSRI
                     NETLERLRIEQPEMLGQ"
     gene            1585..2190
                     /locus_tag="EYO87_00985"
                     /pseudo
     CDS             1585..2190
                     /locus_tag="EYO87_00985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_353560.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glucuronate isomerase"
BASE COUNT          367 a          786 c          827 g          432 t
ORIGIN      
        1 cagcaaggcg aaagggggat cgtcgggatg gcagcacagc cgcatcccga tctcttgcgc
       61 gacgggggcg acctgttcca ggaaatcgtg gaaattgcgg cgcaggaccg catccgtcac
      121 cggcgcatag ctgtcaagca ggtcgcggac atcctgcagg ctgaaacgtt cggctgcgcc
      181 cggcaggccg aagacgacgt tgcccgccaa ttgctggcgt cgcgcctcgt ccatgtcggc
      241 aaagcggcgc gcggcctcgt cgcggacatg ctcggggaca tcccgggccg cgccctggcg
      301 ttgcaggatg tggatgtcga agaccgcgaa atctgtgaaa tcgaaccgca tgcagcgcgc
      361 gcccgaaggc cggggccagg acaggtcggt ccgggtccag tccagaaccg gcatgaaatt
      421 gtagcacagc acctcgattc ccgcgtcgcg gagatggcgc atcgaggcga tccagttcgt
      481 cacatgcgcc cgccagtcgc cgctctgggt cttgatggcc tcgctgaccg gcaggctttc
      541 gaccacctcc caggccagcc ccgacggggt gccgtcgcgc atggcggcga tctgggcctg
      601 gcggcgcgcg atctcgtcgg gcaaccatgt ttcgccggtg ggaatgtggt gcagggccga
      661 gaccacgccc cgcacccccg cctgaagcat gtcgtcgatg gaaacccggt cctgcggccc
      721 gaaccagcgc catgtctgtc gcattctgtc cctcttttcc ttcagccgat cgcgggccgg
      781 tcggttgcgc cctgtctagc tgtcattgcc ccagcatctc gggttgttca atgcgcagtc
      841 gctccagcgt ctcgttgatg cgtgacagat ggtcggtgac ggcggcggcg gcggcatcgg
      901 ggtcgcgatc gcgcagggcg cgcaggatca cgcgatgttc ctgcatcgcg ttctgcgcgt
      961 tgtaggacag cgacagatag cgggcgcggt ccatgtggcc cttgttttcc ttgatcaggg
     1021 tccacaccac ctcgcgaccg atgaaggcgc agatgtcgtg gtgaaaccgg tcgtccagcg
     1081 catgaaagcc gctgcggtcg tcggctgcga tggcggcgtc ctgccgggcg atcagatcgt
     1141 ccagcgcccg atgctgatcc ggggtcaggc gcaacgcggc ctcgcgcgcg gtggcgatct
     1201 ccagcgcgtt gcggatgaaa tgcgcctgcc ggatggcctg ctccgagatc tgcgtgacca
     1261 ccgtcgcgcg ctgcggacgg atcaggatga agcccatctg cgacagccgg tagaaggcat
     1321 cgcgcaccgg ttggcgcgac acccccatct gcgtcgctac ctcggcctcg gacagccggg
     1381 cgccgggcgg cagggtcagg tcgatcaccc gctcatagag ggcgtcataa acctggtcgg
     1441 tcacgctggg cggtcttgcc tcgtccagcg ccggcagggc gacattggcg ggcgatgcgg
     1501 gcggggtcat ggcggctccg gttgacatct cataatctag catattagat gactagcaca
     1561 gtggcaaggc gaatcggggg gatgatggcg ctgcttgacg acgaccgcct gtttccgtcc
     1621 gaaccggttc agcgagatct ggcgcgcgat ctgtatgaag gcgtgcgcga tctgcccatc
     1681 atcagtccgc atggccatac cgacccgcgc tggttcgccg aggatcagcc ctttcccgat
     1741 ccggcgcagc ttttcgtgac gccggaccat tatgtctttc gcatgctggc ctcgcagggg
     1801 gtgccgctgg ccgatctggg cgtgccgcgg gtcgatggcg gcccggtcgc atccgacggg
     1861 cgcagcatct ggcggatttt cgcgcgccac taccatctgt ttcggggcac gccgtcacgg
     1921 ctgtggctgg atcattcctt ccggcatgtc ttcggcatcg accgccgcct gacggccgaa
     1981 acggcggact ggtattacga tcacatcgcc gattgccttg cgaaacccga attccggccc
     2041 cgcgccctgt tcgaccgctt cgggatcgag gccatcgcca cgaccgaggc cgccaccgac
     2101 gatcttcgct ggcaccggat gatccgcgaa tcgggttggc cgggccgcgt ggtgacgacc
     2161 tatcgccccg atggtgtgat cgaccccgag cgccacttcg gcgtcgtcat cgccggtgag
     2221 ggctggcacc ccggagtgat cgggatcgtc gcgtcccgcg tggtggagag gatccatcgg
     2281 ccggtcgtga tggtggccct gagcggcgac cggggccggg gaagcgcccg atcgatctcg
     2341 ggtgtgcact tgtttcgagc cctcgagggg tgccgccggt acctgctccg cttcggcggg
     2401 cacgcgcagg cg
//
LOCUS       DTVW01000075            2083 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1118541, whole
            genome shotgun sequence.
ACCESSION   DTVW01000075 DTVW01000000
VERSION     DTVW01000075.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2083)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2083)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2083
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1118541"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..970)
                     /locus_tag="EYO87_00990"
     CDS             complement(<1..970)
                     /locus_tag="EYO87_00990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018001362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol kinase"
                     /protein_id="HIC64579.1"
                     /translation="MTILAMDQGTTSSRALIFSDDLRVRASAQQEFPQHFPRSGWVEH
                     DPDDIWTTSAATARGALEKAGNPRIDAIGITNQRETVVIWDRETGQPIHRAIVWQDRR
                     TADAIRRLKDEGVEDQVTGVTGLLLDPYFSATKIAWILDRIEGARARAEAGRLAFGTI
                     DSFLIWKLTGGAAHVTDATNASRTLLYDIRKGEWSQDMCKLFGVPMALLPEVKDSADD
                     FGTTRDDLFGRAVPILGVAGDQQAATVGQACFQPGMMKSTYGTGCFALLNTGTRAVRS
                     ENRLLTTIAYRLDGQTTYALEGSIFIAGAVVQWLRDGLGFFKSAAEI"
     gene            complement(1108..>2083)
                     /locus_tag="EYO87_00995"
     CDS             complement(1108..>2083)
                     /locus_tag="EYO87_00995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_387127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="carbohydrate ABC transporter substrate-binding
                     protein"
                     /protein_id="HIC64580.1"
                     /translation="LGWRFTDAWLSMAGNGDKGIPNGKPVDEWGIRVDENDRPVGSCV
                     SRGGDTNGPASVYAIQKYLDWIKAYAPPAAQGMTFSESGPVPAQGEVAQQIFWYTAFT
                     ADMVKPGLPVVNEDGTPKWRMAPSPHGAYWQEGMKLGYQDAGSWTLLKSTPVDRAKAA
                     WLYAQFVTSKTVDVKKSHVGLTFIRESTIQDESFTERAPKLGGLIEFYRSPARLNWTP
                     TGTNVPDYPKLAQLWWQAVGDASSGAKTPQEAMDSLCAEQEKVMERLERAGIQGDIGP
                     KMAEKKDLEWWNNKAKEDGTIAPQLKLDNEKPQPETISYDELVKSWQQ"
BASE COUNT          325 a          691 c          652 g          415 t
ORIGIN      
        1 caatctcggc ggcactcttg aaaaatccca gcccatcgcg cagccactgc accaccgcgc
       61 cggcgatgaa gatgctgcct tccagcgcat aggtcgtctg accatccagg cggtaggcga
      121 tcgtcgtcag cagccggttc tccgaccgca cggcccgtgt gccggtattc agcagcgcaa
      181 agcagccggt cccgtaggtc gatttcatca tgcccggctg gaagcaggcc tgacccacgg
      241 ttgccgcctg ctggtcgcct gcgacgccca gaatgggaac cgcgcgtccg aacagatcgt
      301 ctcgcgtcgt gccgaaatcg tcggcgctgt ccttcacttc gggcagcagc gccatcggca
      361 cgccgaacag cttgcacatg tcctgcgacc attccccctt gcggatatcg taaagcagcg
      421 tgcggctggc attggtggca tcggtgacat gcgccgcccc accggtcagc ttccagatca
      481 ggaagctgtc gatcgtgccg aaggccagcc ggcccgcctc ggcccgtgcg cgcgcgcctt
      541 cgatccggtc caggatccag gcgatcttgg tggcgctgaa atacggatcc agcaacaggc
      601 cggtgacgcc cgtgacctga tcctcgacgc cctcgtcctt caggcgccgg atcgcgtcgg
      661 cggtgcggcg gtcctgccag acgatggcgc ggtggatggg ctgaccggtc tcgcggtccc
      721 agatcaccac ggtttcgcgc tgattggtga tgccgatcgc gtcgatgcgc ggattgccgg
      781 ccttttccag agccccgcgc gcggtcgcgg cgctggtggt ccagatatcg tcggggtcgt
      841 gttcgaccca gcccgagcgc ggaaaatgct gggggaattc ctgctgcgcc gaggcccgca
      901 cccgcagatc gtcggaaaag atcagcgcgc gagaggatgt cgtcccctga tccattgcca
      961 gaatcgtcat cgcgatcgtg tctcctgcct ggtctttcct gtccgaatat ccgtgcccgc
     1021 ggcacctgtc ctcatcgccg cgatcatggg tatttggaca acgaagaagg ggcggccgtg
     1081 cgaccgcccc caagcggctt tcagatctta ttgctgccag cttttgacca gttcgtcata
     1141 gctgatggtt tccggctggg gcttttcgtt gtccagcttc agttgcggcg cgatggtgcc
     1201 gtcttccttg gccttgttgt tccaccattc cagatccttc ttctcggcca tcttggggcc
     1261 gatatcgccc tggatgccgg cgcgttccaa acgctccatg accttttcct gctcggcaca
     1321 gaggctgtcc atggcctctt gcggggtctt ggcgcccgag gaggcgtcgc cgaccgcctg
     1381 ccaccacagc tgcgccagct tcggataatc gggcacgttg gtgccggtcg gcgtccagtt
     1441 caggcgggcg ggcgaacgat agaactcgat caggccaccc agcttgggcg cgcgttcggt
     1501 aaagctttcg tcctggatgg tcgattcgcg gatgaaggtc agcccgacat gggatttctt
     1561 cacatcgacc gtcttcgacg tcacgaattg cgcgtagagc catgccgcct tggcgcggtc
     1621 caccggcgtc gatttcagca gcgtccacga gcccgcatcc tgatagccca gcttcatgcc
     1681 ttcttgccaa taggcaccat gcggcgaggg agccatgcgc cacttgggcg tgccgtcctc
     1741 gttcacgacc ggcaggccgg gcttgaccat gtcggcggtg aaggcggtgt accagaagat
     1801 ctgctgggcg acctcgccct gggcggggac cggaccggat tcgctgaaag tcatgccctg
     1861 cgcggcgggt ggggcatagg ccttgatcca gtccagatat ttctggatcg catagaccga
     1921 ggccggcccg ttggtatcgc cgccgcgcga cacgcagctg cccacggggc ggtcgttttc
     1981 atcgacccgg atcccccatt catcgacggg cttgccgttg gggatgccct tgtcgccgtt
     2041 cccggccatc gacagccagg catcggtgaa gcgccagccc agc
//
LOCUS       DTVW01000076            1909 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1118876, whole
            genome shotgun sequence.
ACCESSION   DTVW01000076 DTVW01000000
VERSION     DTVW01000076.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1909)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1909)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1909
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1118876"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            169..492
                     /locus_tag="EYO87_01000"
                     /pseudo
     CDS             169..492
                     /locus_tag="EYO87_01000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007768732.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
     gene            505..1284
                     /locus_tag="EYO87_01005"
     CDS             505..1284
                     /locus_tag="EYO87_01005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013625704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HIC64581.1"
                     /translation="MNIDFADKRLVLTGAAGIFGRRIARYFAQRGARLCLSDRRADAL
                     HSMVADLEPDPSRILVHETELTRQASMDELVAMVAREWGAPDILVSNAGIYTRFDLMQ
                     MDLSDWDLVMDVNVRAPFYLGREMAKLMIAEGVKGSIIDISSGAARQMNTTGAPYCIS
                     KTAVDRLSKGLALACAQHGIRVNVVEPGFAQGSEVSHLDRDYVARMLERIPLGRESGP
                     EDAPAAIAFLCSEAAGFITGATLSVDGGNSIGTYQRPRAPE"
     gene            1281..>1909
                     /locus_tag="EYO87_01010"
     CDS             1281..>1909
                     /locus_tag="EYO87_01010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009762487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIC64582.1"
                     /translation="MSDGTGSDGARTLTAEGLSVEIGGARVVDDVSFIVRPGRVMALV
                     GESGCGKSLTAYAILGLLPPAARLAGGRIRLGETELSALSNRSLRHIRGREIAIIFQE
                     PSASLDPLTTIGSQVAEAYRLHHDVGRAEAMAKARDMLADVGISDPDRRLHQYPFELS
                     GGMCQRVMISIALINSPKVLVADEPTTALDVTIQAQILFEVQELCRDSNT"
BASE COUNT          353 a          596 c          605 g          355 t
ORIGIN      
        1 aaaatcattc gcacaccaaa ctttaaacgg cctcaactcg agctcaagag atcggtcgga
       61 gctcgttcaa aatgcaatca aaaaccattt tttgaggggg tcgcaaccaa aaaatactga
      121 gaaaaccagt acacaattta ggggcctatc atctttgtgc aacagattgc atccgaattg
      181 gcgggtgcag gcgccgggcg cattctgatc caccacatcc tgccgaacat cgccggtccc
      241 atcctgatcg tcgcaacggc cgaattcggc ctcatgatcc tgttcgagag cggcctttcc
      301 ttcctgggcc tcggcatcca gccgccaacc ccgtcatggg ggtcgatcat gagcgtcgga
      361 cgccaatatc tggaacgggc tccgtggatc gtcttcgtgc cgggcgcctg ccttttcctg
      421 ctcgtctttt ccgtcaacgt gctgggggac tggctgcgcg actggatcga tccgcgctcc
      481 cggtcccgct gaaggagaat atccatgaac atcgactttg ccgacaaacg ccttgtcctg
      541 accggcgccg cgggcatctt cgggcgacgc atcgccaggt atttcgcgca acgtggcgca
      601 agactgtgcc tgtcggatcg ccgcgccgat gcgctgcatt ccatggtcgc cgatctggaa
      661 ccggatccgt cccgcattct ggtccacgag accgaactga cacggcaagc ctcgatggac
      721 gaactggtcg ccatggtcgc tcgcgaatgg ggcgcgccgg atatcctggt cagcaatgcg
      781 ggcatctata cgcgtttcga cctgatgcag atggacctgt cggactggga tctggtgatg
      841 gacgtgaatg tccgcgcccc cttctatctt gggcgtgaaa tggccaagct gatgatagcg
      901 gaaggcgtga aaggcagcat catcgacatc tcgtcgggcg cggcgcggca gatgaacacc
      961 accggcgcgc cctattgcat ctcgaaaacg gcagtggacc ggttgtccaa gggcttggcg
     1021 ctggcatgtg cgcagcacgg cattcgcgtc aacgtggtcg agcccggctt tgcccagggc
     1081 agcgaagtca gccacctgga ccgggactat gtcgcgcgga tgctggaacg gatccccctg
     1141 ggacgcgaga gcggccccga ggacgcgccg gcggcgatcg cctttctctg ctcggaggcg
     1201 gccggattca tcaccggtgc cacgctcagc gtcgatggcg gcaactcgat cggcacctat
     1261 cagcggccac gggcgccgga atgagcgacg ggaccggcag cgacggggcc cgcaccctga
     1321 cggcagaggg cctgagcgtc gagatcggcg gcgcccgggt cgtcgacgat gtctctttca
     1381 tcgtgcggcc ggggcgggtc atggcgctgg tcggcgaatc gggttgtggc aaatcgctga
     1441 ccgcctatgc catcctgggt ctgctgccgc ccgcggcgcg gctggctggc ggacgcataa
     1501 ggctgggcga gaccgaattg tcggctctgt ccaacaggtc gctgcgccac attcgcggcc
     1561 gcgagattgc gatcatcttc caggagcctt ccgcctcgct cgaccctctc acgacgatcg
     1621 gcagccaggt ggcagaggcc taccggttgc atcacgatgt cggccgggcc gaggcgatgg
     1681 ccaaggcgcg cgacatgctg gccgatgtcg gcatttccga tccggaccgg cgtctgcatc
     1741 aatatccgtt cgaactgtcg gggggcatgt gccagcgggt gatgatctcg atcgcgctga
     1801 tcaacagccc caaggtgctg gtcgcggacg aaccgacgac ggcgctggac gtgaccatcc
     1861 aggcgcagat ccttttcgag gtacaagagc tgtgccgcga cagcaacac
//
LOCUS       DTVW01000077            1932 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1119860, whole
            genome shotgun sequence.
ACCESSION   DTVW01000077 DTVW01000000
VERSION     DTVW01000077.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1932)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1932)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1932
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1119860"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..158
                     /locus_tag="EYO87_01015"
     CDS             <1..158
                     /locus_tag="EYO87_01015"
                     /inference="COORDINATES: protein motif:HMM:PF11157.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF2937 family protein"
                     /protein_id="HIC64583.1"
                     /translation="TLKATWGDFRPAFPVTRAGLIAAGIGFLLGWLLASLPRLLLGGG
                     RERLGWR"
     gene            306..1490
                     /locus_tag="EYO87_01020"
     CDS             306..1490
                     /locus_tag="EYO87_01020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010395274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     substrate-binding protein"
                     /protein_id="HIC64584.1"
                     /translation="MKKLLLASAAGVLIAGAAGAEEIKMGISLGFTGPLESMAPAMRD
                     GAELAMKEISDSGLLLDGSTVTPVEGDSTCADAAAATATVERLITAEKVKGIVGGMCS
                     GETIASLENVAKPNGIVMISPSATSPALSTIEDNDLFFRTSPSDARQGEVMSDIILDR
                     GIKNVAVTYTNNDYGKGLADSFQAAFEKKGGTVTVNSAHDDGKADYSAEVAALAAAGG
                     DALVVAGYVDQGGSGIVRAALDTGAFDTFVFPDGMVGQQLVDNFKSEIDGSFGQNPAA
                     EGEGRDKYVAMAKEAGFDGTGAFSAEAYDAASLMLLAMAAAKSSDPAEYKGKIMDVAN
                     APGEKILPGELAKALEILNGGGDIDYVGATSVELVGAGESAGIYREVTFDGGKMEVVG
                     YR"
     gene            1729..1845
                     /locus_tag="EYO87_01025"
                     /pseudo
     CDS             1729..1845
                     /locus_tag="EYO87_01025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352986.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
BASE COUNT          352 a          612 c          653 g          315 t
ORIGIN      
        1 agacgctgaa ggccacctgg ggcgatttcc ggcccgcgtt tcccgtgacc cgcgcgggat
       61 tgattgccgc gggcatcgga tttcttctgg gctggctgct ggcctctctg ccgcgcctgt
      121 tgcttggcgg gggccgggaa cggctgggct ggcgctgatc gccgcaagcg cgccgccgcg
      181 cctgaccgcg acgccccaag cctgcccgaa caggcaggcg tgacgttgcg acatcgtgct
      241 tttcttttgg gcagcgggct tctaacctga cgcgcaggac aacgttccaa ctgggagaaa
      301 agtcaatgaa gaagctgctt ctggccagtg ccgccggcgt actgatcgcc ggtgccgccg
      361 gcgccgagga gatcaagatg gggatttcgc tgggcttcac cggcccgctg gaatcgatgg
      421 cgcccgcgat gcgcgacggc gccgaactgg cgatgaagga aatcagcgat tccggcctgc
      481 tgctggacgg atcgaccgtg accccggtcg agggcgattc gacctgcgcc gacgcggccg
      541 ccgcgaccgc gaccgtcgag cgcctgatca ccgccgaaaa ggtcaagggc atcgtcggcg
      601 gcatgtgttc gggcgagacc atcgcctcgc tggaaaacgt ggccaagccg aacggcatcg
      661 tcatgatctc gccctcggcc acctcgcccg cgctgtccac gatcgaagac aacgatctgt
      721 tcttccgcac atcgccgtcg gatgcgcgtc agggcgaggt gatgtccgac atcatcctgg
      781 accgcggcat caagaacgtc gccgtgacct ataccaacaa cgattacggc aaggggctgg
      841 ccgacagttt ccaggccgcg ttcgagaaga agggcggcac cgtcaccgtg aacagcgccc
      901 atgacgacgg caaggccgat tattcggccg aggtcgcggc gctggccgcc gcgggcggcg
      961 acgcgctggt cgtggcgggc tatgtcgatc agggcggctc gggcatcgtg cgcgcggcgc
     1021 tggataccgg cgcctttgac accttcgtct tccccgacgg catggtcggc cagcagcttg
     1081 tcgataattt caagtccgag atcgacggca gcttcgggca gaaccccgcc gccgaaggcg
     1141 agggccgcga caaatatgtc gcgatggcca aggaagcggg cttcgacggc accggcgcct
     1201 tctcggccga ggcctatgac gccgcatcgc tgatgctgct ggcgatggcg gccgcgaaat
     1261 ccagcgatcc ggccgaatac aagggcaaga tcatggatgt ggccaatgcg ccgggtgaaa
     1321 agatcctgcc cggcgaactg gccaaggcgc tggagatcct gaatggcggg ggcgacatcg
     1381 attatgtcgg cgcgacctcg gtcgaactgg tcggcgcagg cgaatccgcc ggcatctatc
     1441 gtgaagtcac ctttgacggt ggcaagatgg aagtcgtcgg ctatcgctga accgcaaccc
     1501 gttgctccgg cccggcaccc gcgcggtgcc gggccatttt tcagggccgg ggatggaaaa
     1561 ggcccaggat cgaaaccgca cgccccccgg tgctgccgcg tctcggggcg aattccgatc
     1621 ttggtggagc cggaacggga cgaggcggcc agggcgcagc tttttcgtga cagccacggc
     1681 ccggggcggt catgattcac cggacaagac gaggatggga acggaaccat gatccgggtc
     1741 gaagacctgc acagacattt cggcggcttc cgcgccgtcg acggcgccag cctgaccatc
     1801 gacaccggct cgatcaccgg actgatcggc cccaatggcg cgggatgagc tgatgaccag
     1861 ggtgcttaaa gtcatggcgg atcatcaatt ggacgccatt gtccacaagt ctgtagagca
     1921 ccaaccgacc ct
//
LOCUS       DTVW01000078            3282 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1120708, whole
            genome shotgun sequence.
ACCESSION   DTVW01000078 DTVW01000000
VERSION     DTVW01000078.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3282)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3282)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3282
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1120708"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(20..616)
                     /locus_tag="EYO87_01030"
     CDS             complement(20..616)
                     /locus_tag="EYO87_01030"
                     /inference="COORDINATES: protein
                     motif:HMM:PF00392.19,HMM:PF07729.10"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HIC64585.1"
                     /translation="MEVWQSRCRAGNRKMDQRPRINPGISTAQQVHDWLHDLILRGDL
                     LPGTQLSESEIAGRVGVSRQPVREAFIRLAGAGLTEVRPQRGTFIGRISLREVLAVRA
                     IREAVESDMIRILTQRMTDDIHRDLREQLDRQRAAAARRDVNGFVLLDNLFHRTLATA
                     ADAAFPGTVLALAVADSLVICYFCWCSLGVLLLSLFSC"
     gene            840..1919
                     /locus_tag="EYO87_01035"
     CDS             840..1919
                     /locus_tag="EYO87_01035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_353532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF475 domain-containing protein"
                     /protein_id="HIC64586.1"
                     /translation="MHDGSQTGPASARPVLRYFRWAFIVTAIGLALGAALGWQTTGTF
                     GGMAGILFICTVLAVLEISLSFDNAIVNANKLKTMQPKWQHRFLTWGIVIAVFGMRIV
                     FPLLIVVIAAGIGPWQAVVLAASRPEEYARIMHEARLPIAAFGGTFLLMVGLGFFFDG
                     EKDVHWVRWLERRMQKYATIRGIEVGFALSVVLIFAHFLPPRENEIFLRSAIWGLLTF
                     LAVEVLGGFLDHSQQQTLAAGARGGIGAFLYLEVLDASFSFDGVIGAFALSQNLFVIA
                     IGLGIGAMYVRSMTIMLVEKGTLAEYRYLEHGAFWAIIALAMVMFLQYFVQIPEVITG
                     LGGAALIGVSLYSSVRWNRHLGGKP"
     gene            complement(2045..2926)
                     /locus_tag="EYO87_01040"
     CDS             complement(2045..2926)
                     /locus_tag="EYO87_01040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018387322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HIC64587.1"
                     /translation="MSDHGIKEAPVGKPRGAAFLKGLGRARPTKPGQTYGVPGQGNTT
                     WLSLLTIAGILLPWWAVTTAGLVKPLFMPAPQAIVRKFLDIWTQGFTGTPFWQHVLIS
                     TARVFGAFLLACLIGIPLGLAMGMSPVMRGIFDPPIEFYRPIPPLAYLPLMIIWFGIG
                     ETSKVLLIFLSVFAPVALGARAGVRSAAIEQIHAAYSFGASRWQVMRHVILPSAMPEI
                     LTAMRIGIGFGWTTLVAAEMVAATKGIGYMVLSASQFLQTSTVIMGIFVIAAIAYAFD
                     MLMRFVERRVVPWKGKM"
     gene            complement(2923..>3282)
                     /locus_tag="EYO87_01045"
     CDS             complement(2923..>3282)
                     /locus_tag="EYO87_01045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018387323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate ABC transporter ATP-binding protein"
                     /protein_id="HIC64588.1"
                     /translation="VGIARALTCDPKLLLMDEPLGALDALTRERAQELILKIWKSTGK
                     TVFLITHSVEEALFMGTRLIVMSPRPGRIAHEFDLPFSRQFLDGAKAREVKASAEFIT
                     LREEVLRIIFSDEEEAA"
BASE COUNT          572 a         1049 c         1066 g          595 t
ORIGIN      
        1 acggaacaaa ggcacaaaac tagcacgaga acagggacaa cagcagaaca cccaaagaac
       61 accaacaaaa gtagcagatg accaacgagt cggctactgc caacgcaagc acagtgccag
      121 gaaatgctgc gtcggcggcg gtggccagcg tgcgatggaa cagattgtcc agcaggacaa
      181 agccgttcac gtcgcgccgg gccgcggcgg cgcgttgccg gtccagctgt tcgcgcaaat
      241 cgcgatggat atcgtcggtc atccgctgcg tcaggatgcg gatcatatcg ctttcgacgg
      301 cttcgcggat ggcgcgcacg gccagaacct cgcgcagcga gatgcggcct atgaaagtgc
      361 cgcgttgcgg acgaacctcg gtcaggccag cgccggccag ccggatgaag gcttcgcgaa
      421 ccggctgccg gctgacgccg actcgaccgg cgatctcgct ttcgctcagc tgggtgcccg
      481 gcagaagatc gccgcgcagg atcagatcat gcagccagtc atggacctgc tgcgccgtcg
      541 agatgcccgg attgatgcgc ggtcgctgat ccatcttcct gttcccggcc ctgcagcgag
      601 actgccatac ttccatacca atttgaagcg tccacttgcg attgatcgcg acctgcggcc
      661 gggggcgcct cggcgcccga caaccagctc ttgcaacacc ctgcctggac aggcatcttg
      721 cgccgcatcg cgcccctgcg cgcgccccaa tgtccggtga ccgggcccct ctgacggatg
      781 tggcggcacg tccgtgatgt cggcaccaaa caaagacacg ccgcctcggg catcatgcca
      841 tgcacgacgg atcccaaacc ggtcccgcct ctgcgcggcc cgttcttcgc tatttccgct
      901 gggccttcat cgtcaccgcc atcggcctgg cgcttggcgc cgctcttggc tggcagacga
      961 ccggcacctt cgggggaatg gccggcatcc ttttcatctg cacggttctg gcggtgctgg
     1021 aaatctcgct gtccttcgat aatgccatcg tgaacgccaa caagctgaag acgatgcagc
     1081 cgaaatggca gcaccgcttc ctgacctggg gcatcgtgat cgcggtgttc ggaatgcgga
     1141 tcgtctttcc gctgctgatc gtggtgatcg cggccgggat cgggccgtgg caggccgtgg
     1201 ttctggccgc cagccgcccc gaggaatatg caaggatcat gcacgaggcg cggctgccca
     1261 tcgcggcctt cggcggcacg tttctgctga tggtcggact tggcttcttc tttgacggcg
     1321 aaaaggacgt gcactgggtc cgctggctgg aaaggcggat gcagaaatat gccacgatcc
     1381 gggggatcga ggtcggcttt gcgctgtcgg tggtgctgat cttcgcccat ttcctgccgc
     1441 cccgggaaaa cgagatcttt ctgcgctcgg cgatctgggg attgctgacc tttctggcgg
     1501 tcgaggttct cggcggcttt ctggatcatt cgcagcaaca gaccctggcc gccggagcaa
     1561 ggggcgggat cggcgccttt ctgtatctcg aggttctgga cgcctcgttc agcttcgacg
     1621 gcgtgatcgg ggccttcgcg ctaagccaga acctgttcgt catcgccatc ggcctgggca
     1681 tcggcgccat gtatgtgcga tcgatgacga tcatgctggt cgaaaaggga acgctggccg
     1741 aataccgcta tctggaacac ggcgccttct gggcgatcat cgcgctggca atggtgatgt
     1801 tcctgcaata tttcgtccag attcccgaag tcatcaccgg gctgggcggt gccgcgctga
     1861 tcggggtgtc gctgtattcg tcggtccggt ggaaccggca tctcggcggc aagccgtagg
     1921 acatcgatgc cggtctttcg gcggccattt cctgcgccgg gacgaatctt gccttctgcc
     1981 gctggtcgga cggatttccg ccggaccgcc ccttgccttt ccgcgccgac ggccttccct
     2041 gcggctacat cttgcctttc cacggcacca cccggcgctc cacgaatcgc atcagcatgt
     2101 cgaaggcata ggcgatggcc gcgatgacga agatgcccat gatcacggtc gaggtttgca
     2161 ggaactgcga cgcgctcagc accatgtagc cgatgccctt cgtggccgcg accatttcgg
     2221 cggcgaccag cgtggtccag ccgaagccga tgccgatgcg catcgccgtc aggatctcgg
     2281 gcatggccga gggcaggatg acgtggcgca tgacctgcca tcggctggcg ccgaagctgt
     2341 aggcggcgtg gatctgttcg atcgcggccg atcgcacccc ggcgcgtgcg cccagggcga
     2401 cgggcgcgaa gaccgacagg aagatcagca gcaccttcga ggtttcgccg atgccgaacc
     2461 agatgatcat cagcggcaga taggccagcg gcgggatcgg gcgatagaac tcgatcggcg
     2521 gatcgaagat gccgcgcatg accgggctca tgcccatggc caggcccagc gggatgccga
     2581 tcaggcaggc cagcagaaag gcgccgaaga cgcgcgcggt cgagatcagc acatgctgcc
     2641 agaacggcgt gccggtaaag ccctgggtcc agatgtcgag gaatttccgc acgatcgcct
     2701 gcggcgcggg catgaacagc ggcttgacca gcccggcagt ggtcaccgcc caccacggca
     2761 gcaggatgcc ggcgatggtc agcaggctga gccaggtcgt gttgccctgc cccggcacgc
     2821 cgtaggtctg gccgggcttg gtcgggcggg cgcggcccag ccccttcagg aacgcggctc
     2881 cgcgcggctt gccgaccggg gcctccttga tgccatgatc gctcatgcgg cttcctcctc
     2941 gtcgctgaag atgatgcgca ggacctcttc gcgaagggtg atgaattccg ccgaggcctt
     3001 gacctctcgt gccttggcac cgtccaggaa ctggcgcgag aacggcaggt cgaattcatg
     3061 cgcgatgcgt ccggggcgcg gcgacatgac gatcagccgg gtgcccatga acagcgcctc
     3121 ctcgacgctg tgggtgatca ggaagaccgt cttgccggtg cttttccaga tcttcaggat
     3181 cagctcctgc gcccgttcac gggtcaatgc gtccagcgcg cccagcggct cgtccatcag
     3241 cagcagcttg ggatcgcagg tcagcgcgcg ggcgatgccg ac
//
LOCUS       DTVW01000079            1774 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1121657, whole
            genome shotgun sequence.
ACCESSION   DTVW01000079 DTVW01000000
VERSION     DTVW01000079.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1774)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1774)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1774
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1121657"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            142..537
                     /locus_tag="EYO87_01050"
     CDS             142..537
                     /locus_tag="EYO87_01050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008031993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VRR-NUC domain-containing protein"
                     /protein_id="HIC64589.1"
                     /translation="MTCRGTPEADLQRAVVRSLRQILPRTAIIHHCANEVTEAGPRGA
                     RRQAILVGMGVHAGFADLMVLCDGRVLFLELKAPKGRLRPTQEAFRDAVLAQGFGWAL
                     VRSLDDALTALADHGFSTRIATPARRAAP"
     gene            534..1499
                     /locus_tag="EYO87_01055"
     CDS             534..1499
                     /locus_tag="EYO87_01055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008031995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HIC64590.1"
                     /translation="MSHAATNWAIQQRGLKPATKIVLWHLCDRHNPDFGCFPTQVRLA
                     EDAEMSVSALNEHLTKLEERRLIHRVRTHDPRTHKRQATRYILGFEAGFPQDPSPETG
                     DGDEGPEGEPGGDPTPESGHGSISGFSAKPSPDFAESHLRNPETNPVREPLREPVKEV
                     EDAQARDDRFEEFFGELLDALGLDTDAGLPGWWQGWPAREHVRRWITDLGLTEDRIVA
                     LARDSRNAHPEPPDGPRALDRLMERAARTATASPPSEGDHRRKRKSKSADAPRASLDE
                     IASFYAGMVNGDGYLPSNAISNTVRNAMLERGLVTAQRLRERGVP"
     gene            1562..>1774
                     /locus_tag="EYO87_01060"
     CDS             1562..>1774
                     /locus_tag="EYO87_01060"
                     /inference="COORDINATES: protein motif:HMM:PF00145.15"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HIC64591.1"
                     /translation="MGLMLAEPGYHSRAFVEWEDWPRSVLIAAQRAGYFAPAPIWDDL
                     RSFDARPFRGAFDTVLAGYPCQPFSAA"
BASE COUNT          309 a          593 c          588 g          284 t
ORIGIN      
        1 cgcctgcgag gtgctggccc gccatggcgc gacccaagag gagcgcgaag aggcaaggct
       61 gctgcgcctg atcgtcgatg cccgacggcc ggttcgcggc cgacggaatg acggtgatca
      121 tgagtcccgc ggggtgctgc gatgacgtgc cgcggcaccc ccgaagccga tctgcagcgc
      181 gcggtggtgc gcagcctgcg ccagatcctg ccccgcaccg ccattatcca tcactgcgcc
      241 aatgaggtga cggaagccgg gccgcgcggc gccaggcgcc aggcgatcct ggtcggaatg
      301 ggcgtccatg ccggtttcgc cgatctgatg gtgctctgcg acggccgcgt gctgtttctg
      361 gaactgaaag cgcccaaggg ccggttgcga ccgacgcagg aggcgttccg cgatgccgtt
      421 ctggcgcagg gctttggctg ggcgctggtc aggtcgctgg acgatgcgct gacagccctg
      481 gccgatcacg ggttttccac ccgcattgcc accccggcgc ggagggctgc gccatgagcc
      541 atgccgcaac caactgggcc atccagcagc gcgggttgaa acctgcgacc aagatcgtgc
      601 tctggcatct ctgcgaccgc cacaatccgg atttcggctg ctttccgacg caggtgcggc
      661 tggccgagga tgccgagatg tcggtctcgg cgctgaatga acatctcacc aagctcgagg
      721 aacgccgcct gatccaccgg gtccgcacgc atgatccccg cacccacaag cggcaggcca
      781 cccgatatat tctgggcttt gaagctggct ttccgcaaga cccgtctccg gaaaccggag
      841 atggcgacga gggaccggag ggcgaaccgg gcggcgatcc aactccggaa tccggacatg
      901 ggtccatctc cggattttcg gcaaaaccat ctccggattt tgccgaaagc catctccgga
      961 atccggagac taaccctgta agggaacctt taagggaacc agtaaaggag gtggaggacg
     1021 cgcaggcgcg cgatgatcga tttgaggagt ttttcgggga actgctcgac gcgctgggtc
     1081 tggacaccga tgccgggctg ccgggatggt ggcagggctg gccggcccgg gagcatgtcc
     1141 ggcgctggat caccgatctc gggctgaccg aagaccggat cgtcgcactg gcccgggaca
     1201 gccgcaacgc gcatcccgaa ccacctgacg ggccgagggc gctggaccgg ctgatggaac
     1261 gggcggcacg cacagccacg gcctcgcccc cctccgaagg cgatcaccgc cgcaagcgaa
     1321 aatccaaatc cgccgacgcg cctcgggcca gcctcgacga aatcgccagt ttctatgccg
     1381 ggatggtgaa cggcgacggc tacctaccct cgaacgccat ctccaacacc gtgcgcaatg
     1441 ccatgctcga gagggggctg gtcaccgccc agcgcctgcg tgagagaggg gtgccgtgaa
     1501 tggtctggtg tcacgtcccc ggcacggact cagcctctgc gcaggcggcg gaggcctgga
     1561 tatgggcctc atgctcgccg aacccggata tcattcccgt gccttcgtcg aatgggagga
     1621 ctggccaaga tccgtcctca tcgcggccca gcgcgccggg tatttcgccc cggccccgat
     1681 ctgggacgat ctgcgcagct tcgatgcccg ccccttccgt ggcgccttcg acacagtgct
     1741 ggccgggtat ccctgccagc ccttcagtgc cgcc
//
LOCUS       DTVW01000080            2464 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1122196, whole
            genome shotgun sequence.
ACCESSION   DTVW01000080 DTVW01000000
VERSION     DTVW01000080.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2464)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2464)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2464
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1122196"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1426)
                     /locus_tag="EYO87_01065"
     CDS             complement(<1..1426)
                     /locus_tag="EYO87_01065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecN"
                     /protein_id="HIC64592.1"
                     /translation="MLRSLDIRDMLLIDRLALEFGPGLNVLTGETGAGKSILLDCLGF
                     VLGWRGRADLVRQGAAQGEVTAVFDLPAAHPARAVLAETGIEIDDDELILRRVNGGDG
                     RKTGFVNDRRVSGDVLRRLSEALVELHGQHDDRGLLNPRGHRAMLDAFGGLDLSGIRQ
                     AWSLRRVAARRLQEAEAQLAAARAEEDFLRHAVAELDRLDPQPGEEAELDTRRRAMQA
                     AERIGGDVSRALQMLGPEGAEGAMLDAGRWLEGAADRADGRLDPPLAALSRALTELGE
                     AYRGVEDALSAMEFQPAALEATEERLFALRGLARKHDVLPDDLAGLAEDLRARLQGID
                     AGEMAIATLRRDAEAAEAAYQVAAEALSAARCEAGRRLDQAVMAELAPLKMERAVFET
                     RLSRAEPGPEGLDLVAFTVATNPGAPSGPLDKIASGGELSRFLLALKVCLARGNEALV
                     LIFDEIDRGVGGATADAVGRRLKRL"
     gene            complement(1466..2317)
                     /locus_tag="EYO87_01070"
     CDS             complement(1466..2317)
                     /locus_tag="EYO87_01070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009828167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamD"
                     /protein_id="HIC64593.1"
                     /translation="MARSKISASILAAVLASVTLAGCSSLGGSDGDKRNLDRFTAEQI
                     YKRGEYELENTRKAKDAVFYFSEVERLYPYSEWAKRALIMQAYANHRAKNYEEARGAA
                     QRFIDTYPGDEDAAYAKYLLALSYYDQIDEVGRDQGLTFQALQALRDVIEQYPDSEYA
                     RSAMLKFDLAFDHLAAKEMEIGRYYLKRGYYPASINRFRVVVEEYQTTAQTPEALLRL
                     VEAYLALGLYDEAQTAGAILGYNFKSSPFYEDAFAQLRGRGLSPEARGESWLTNVYRQ
                     MIQGRWL"
BASE COUNT          421 a          886 c          759 g          398 t
ORIGIN      
        1 ccaaacgctt aagccggcgg ccgacggcgt cggcggtcgc gcccccgacg ccgcggtcga
       61 tctcgtcaaa gatcagcacc agcgcctcgt ttccgcgcgc caggcagact ttcagcgcca
      121 acaggaagcg tgacaattcg ccgcccgagg cgatcttgtc cagcggcccc gacggcgcgc
      181 cgggattggt ggcgacggta aaggccacca ggtccagccc ctccggtccc ggctcggccc
      241 gggacagccg ggtttcaaag accgcgcgtt ccatcttcag cggcgccagt tccgccatta
      301 ctgcctggtc gagcctccgg cccgcctcgc accgcgccgc cgacagggcc tcggccgcaa
      361 cctgataggc cgcctcggct gcctcggcat ccctgcgcag ggtcgcgatg gccatctccc
      421 cggcgtcgat cccctgcagc cgggcgcgca gatcctcggc cagcccggcc agatcgtcgg
      481 gcaggacgtc atgcttgcgc gccagtccgc gcagcgcgaa aagacgctct tccgttgctt
      541 ccagggcggc gggctgaaat tccatcgcgc tcagcgcgtc ctcgaccccg cgatacgcct
      601 cgcccagttc ggtcagggcc cgcgacaatg ccgcaagagg cggatccagc cgtccatcgg
      661 cccggtcggc ggcaccctca agccagcgtc ccgcatccag catcgcaccc tcggcacctt
      721 ccggccccag catctgcagg gcgcgggaca catcgccacc gatccgctcg gccgcctgca
      781 tggcgcggcg gcgggtatcc agttccgcct cttcgcccgg ctgcgggtcc agccggtcca
      841 gttcggcaac cgcgtggcgc aggaaatcct cttcggcgcg ggccgcagca agctgcgcct
      901 cggcctcctg caatcgccgg gcggcgacgc ggcgcagcga ccaggcctga cggatgcccg
      961 acagatccag cccgccaaag gcgtccagca tcgcgcggtg gccgcgcggg ttcaaaaggc
     1021 cgcggtcatc atgctgtccg tgcagctcca ccagcgcctc ggacaagcgc cgcagcacgt
     1081 cgcccgaaac gcggcggtcg ttcacgaagc cggttttgcg tccgtcaccg ccattcaccc
     1141 gccgcaggat cagttcgtca tcgtcaatct cgatccccgt ctcggccagc accgcgcggg
     1201 cggggtgtgc ggcgggcaga tcgaaaaccg ccgtgacttc gccctgcgcg gccccctgtc
     1261 gcaccagatc ggcgcgaccg cgccagccca ggacgaaccc aagacaatcc agcaggatgg
     1321 attttcccgc cccggtctcg ccggtcagga cattcaggcc gggaccgaat tccagcgcca
     1381 gccggtcgat cagcagcatg tcccgaatgt ccagcgatcg cagcatggca atcgtcggcc
     1441 gcgcctcagc gcagcctccc cctggtcaca accatctgcc ctggatcatc tggcgataga
     1501 cattggtcag ccagctttcg ccccgagcct cgggcgacag gccccgcccg cgaagctgcg
     1561 cgaaggcatc ctcgtaaaag ggcgatgact tgaagttgta gcccaggatc gcgccggccg
     1621 tctgcgcctc gtcataaagg ccaagcgcca gataggcctc gaccagacgc agcagcgcct
     1681 cgggcgtctg ggccgtggtc tgatattcct ccacgacaac gcggaagcgg ttgatcgagg
     1741 ccgggtaata cccgcgcttg aggtaatagc gcccgatctc catctctttc gcggcgaggt
     1801 gatcgaaggc caggtcgaat ttcagcatcg cgctgcgggc atattcgctg tcgggatatt
     1861 gctcgatcac atcacgaagc gcctgcaggg cctggaaggt cagcccctgg tcgcgaccga
     1921 cctcgtcgat ctggtcataa taggacaggg ccagcagata tttcgcatag gccgcatctt
     1981 cgtcgccggg ataggtgtcg atgaaacgct gggccgcacc gcgggcctct tcgtaattct
     2041 tggcgcggtg attggcgtag gcctgcatga tcagcgcccg cttggcccat tccgagtagg
     2101 ggtaaagccg ctcgacctcg gagaagtaga agaccgcgtc cttggccttc ctcgtgttct
     2161 ccaactcgta ttcgccgcgc ttgtagatct gttcggcggt aaagcgatcc aggttgcgct
     2221 tgtcgccatc cgacccgcca agagaagaac agccggccag cgtcacgctt gccaggaccg
     2281 cagccaagat cgaagccgag attttcgagc gcgccatctt caccctgcca ttccattctg
     2341 ctgtgcggcc gaccgtccat ggcggggctg ccggcacctc gtagcacaga acatcagggg
     2401 gcgcaaaatg gcaatccgtt gaattccgcg cgtgaattga ggcgcgaccg gcgacggcaa
     2461 gacc
//
LOCUS       DTVW01000081            1448 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1122313, whole
            genome shotgun sequence.
ACCESSION   DTVW01000081 DTVW01000000
VERSION     DTVW01000081.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1448)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1448)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1448
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1122313"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..128)
                     /locus_tag="EYO87_01075"
     CDS             complement(<1..128)
                     /locus_tag="EYO87_01075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_351782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15"
                     /protein_id="HIC64594.1"
                     /translation="MKLHEIRDNDGANRKKKRVARGPGSGKGKTAGRGIKGQKSRSG"
     gene            666..1358
                     /locus_tag="EYO87_01080"
     CDS             666..1358
                     /locus_tag="EYO87_01080"
                     /inference="COORDINATES: protein motif:HMM:TIGR03370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VPLPA-CTERM sorting domain-containing protein"
                     /protein_id="HIC64595.1"
                     /translation="MKFSGLIAAVFAASTTFAATIQAATLIDNSNTAYYNNSIGRALD
                     GTNPYAGSFMFPRPGKRPASDFTVTSEPDLSSAQATLGNWLTDPLNPGGTWTRNPVSI
                     RKHWRKNTETAIIYTLDAGLGGIANAMASISVNNGAYVWLNGKFLGGLTSPGKNRNMK
                     TLALELGPIDAGMNYLQVLREDHAGTRRYSINVSGDYIDQQALSPVPLPASGLLLFGA
                     AGGLAMFRRKAA"
BASE COUNT          291 a          473 c          398 g          286 t
ORIGIN      
        1 cccgagcgcg atttctggcc cttgataccg cggccggcgg tcttgccctt gccagagccg
       61 ggcccgcgcg caacgcgctt cttcttgcgg ttcgcgccgt cattgtcgcg aatttcgtgc
      121 agtttcatgt cgcttctcct tcgccggact catccccgaa gcgaaacagg atggccacgg
      181 catgtcttgg ctggtgaatc aatgtgctct tgtgcaccgc gggctgatac agaagctaca
      241 ggccgcggtc aagtcgctgg cgcaaccgct tgtgttttga tcgcgcgaca tcccccgcca
      301 ttcggatcaa tttccattca tccggtctcg gccatgcatg cgcatctcgg acccccaacc
      361 gcgatcgcgc ttttcgtcca gcccgccgat gccgccgaat gcccgcccga accgctgacg
      421 atggccacgc ccgagccgcc agagggcgca cgcaagcccc gcaccgcgcc acgataccaa
      481 agccatcaga cttcaactga cgcgtgaatt tccgccgatg cactacttct tctggatgta
      541 ttctttgaca tgcaagtccc tgcgacaaaa aacaaaatta tcaaaaagac aattgacggg
      601 acagacaatt cgcgccaaac aacacgcatt cacgagtaac ttcgacagaa tgaatcgagg
      661 attttatgaa gttttccgga ttgattgcgg cggtgttcgc cgcctcgacg acctttgccg
      721 ccacgatcca ggccgccacc ctgatcgaca attcgaacac ggcctactac aataacagca
      781 tcgggcgtgc gctggatggc accaatccct acgcgggcag cttcatgttt cccaggccgg
      841 gcaaacggcc cgccagcgat ttcacggtca cgtctgagcc ggatttgtcc tctgcgcagg
      901 caacgcttgg caattggctg accgacccgt tgaatcccgg cggcacctgg acgagaaacc
      961 cggtcagcat ccgcaagcat tggcgcaaga ataccgaaac cgcgatcatc tatacgctgg
     1021 acgcgggcct cggcggcatt gccaatgcca tggcctcgat ctcggtcaat aatggcgcct
     1081 atgtctggct gaacggaaaa ttcctgggtg gcctgacctc tcccggcaag aacaggaaca
     1141 tgaagacgct ggccttggaa ctgggcccca tcgacgccgg catgaactat cttcaggttc
     1201 tccgcgagga tcacgcgggc acacggcgct attcgatcaa tgtcagcggc gattatatcg
     1261 accagcaggc cctgtcgccg gtgccgctgc cggcttccgg cctgctgttg ttcggcgcgg
     1321 ccggcggcct cgcgatgttc cgccgcaagg ccgcctgagc ccgcttgcca gggttgaatc
     1381 aggacacgcc ccggtcagtc atagccgggg cggaattgat tcgcgtgacc ggttgaaagg
     1441 accccgta
//
LOCUS       DTVW01000082            1609 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1122474, whole
            genome shotgun sequence.
ACCESSION   DTVW01000082 DTVW01000000
VERSION     DTVW01000082.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1609)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1609)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1609
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1122474"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1609)
                     /gene="glgP"
                     /locus_tag="EYO87_01085"
     CDS             complement(<1..>1609)
                     /gene="glgP"
                     /locus_tag="EYO87_01085"
                     /EC_number="2.4.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen/starch/alpha-glucan family
                     phosphorylase"
                     /protein_id="HIC64596.1"
                     /translation="LAACFMESLSSLSVPAFGYGIRYEHGLFRQRFEAGQQVETPEDW
                     LNQPHPWEFVRLDYSFTIGFKGHVEDLDGRAVWHPGESVIARAYDMPVVGWQGGWANT
                     LRLWGAHPTTLLDLRRFNAGDHTAAAEPEALARTISRVLYPDDGTESGKELRLKQEYF
                     LTSAALQDILRRFLAEHDDLSQLPDKVAIQLNDTHPAIAGPELMRLLMDDHGMDFTTA
                     RDLARGVLNYTNHTLLPEALERWSTWLMGRVLPRHMQIIQMIDDDHRTSSGRPDRVAI
                     VDHDEVRMGELAFIMAGKVNGVSALHTDLVKDTVFADLNKLHPGRIVNQTNGVTPRRW
                     LRMANPALARLLDDTIGGGWTGDLDQLAGLEPHAGDPAVLERLRKAKRANKVWLAQGL
                     LADLGVKADADAIFDVQIKRMHEYKRQLLNILEAIALWRRIHDNPNGDWTPRVKIFGG
                     KAAPGYWLAKTIIHLINDVASTINDDPVTRDLLQIAYPPNYNVSMAEDLIPAADLSEQ
                     ISTAGKEASGTGNMKFTMNGALTIGTLD"
BASE COUNT          258 a          518 c          530 g          303 t
ORIGIN      
        1 cgtccagcgt gccgatggtc agcgccccgt tcatggtgaa tttcatgttg ccggtccccg
       61 aggcctcctt gcccgcggtc gagatctgtt cggacaggtc ggcggctggg atcaggtcct
      121 cggccatcga gacgttgtaa ttcggcggat aggcgatctg caacagatcg cgcgtgaccg
      181 ggtcgtcatt gatcgtggag gccacgtcgt tgatcaggtg aatgatcgtc ttggccagcc
      241 aatagcccgg agcggccttg ccgccgaaga tcttgacgcg cggcgtccag tcgccgttgg
      301 ggttgtcatg gatgcgccgc cacagcgcga tcgcttccag gatgttcagc aattgccgct
      361 tgtattcgtg catccgcttg atctgcacgt cgaagatcgc gtccgcgtcg gccttcacgc
      421 ccagatcggc cagcagccct tgggccagcc agaccttgtt ggcgcgcttg gccttgcgca
      481 ggcgttccag gacagccgga tcgccggcat ggggttccag cccggccagc tggtccagat
      541 cgccggtcca gcccccgccg atcgtgtcgt ccagcagccg cgccagggcc gggttggcca
      601 tgcgcagcca gcggcggggg gtgacgccgt tcgtctggtt cacgatccgc cccggatgca
      661 gcttgttcag atcggcgaag acagtgtcct tgaccaggtc ggtatgcagg gccgagacgc
      721 cgttcacctt gccggccatg atgaaggcca gttcgcccat ccgcacctcg tcgtgatcga
      781 cgatggccac ccggtcgggc cggccgctgg atgtgcggtg atcgtcgtcg atcatctgga
      841 tgatctgcat gtgacgcggc aggacccggc ccatcagcca ggtggaccag cgttccagcg
      901 cctcgggcag cagggtgtgg ttggtatagt tcagcacccc gcgcgccaga tcgcgggcgg
      961 tggtgaaatc catcccgtga tcgtccatca gcagccgcat cagttccggt ccggcaatgg
     1021 cgggatgggt atcgttcagc tggatcgcca ccttgtcggg cagttgcgac aggtcgtcat
     1081 gttcggccag aaagcggcgc aggatgtcct gaagcgcggc cgaggtcagg aaatattcct
     1141 gtttcagcct caattccttg cccgattccg tgccgtcatc gggatagagc acgcggctga
     1201 tcgtgcgggc cagcgcctcg ggttcggccg ccgcggtgtg atcgccggcg ttgaagcggc
     1261 gcaggtccag cagtgtggtc ggatgcgccc cccacagccg cagcgtgttg gcccagccgc
     1321 cctgccagcc gaccaccggc atgtcatagg cccgcgcgat cacgctttcg cccggatgcc
     1381 agaccgcgcg gccatccaga tcctcgacat ggcccttgaa gccgatcgtg aagctgtaat
     1441 cgaggcgcac gaattcccac ggatggggct ggttcagcca atcctcgggc gtctcgacct
     1501 gttgccccgc ctcgaaccgc tggcggaaca ggccgtgttc gtagcggatg ccatagccga
     1561 aagccggcac cgacagcgag gacagcgatt ccatgaaaca ggccgcaag
//
LOCUS       DTVW01000083            2664 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1122513, whole
            genome shotgun sequence.
ACCESSION   DTVW01000083 DTVW01000000
VERSION     DTVW01000083.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2664)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2664)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2664
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1122513"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1414)
                     /locus_tag="EYO87_01090"
     CDS             complement(<1..1414)
                     /locus_tag="EYO87_01090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007198682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannitol dehydrogenase family protein"
                     /protein_id="HIC64597.1"
                     /translation="MPDRLFRSPSEAPAGIVHLGLGAFFRAHGAIYLAEAMAAGGGDW
                     GVTGVSLQSPGTRDRLRPQGWAYQAVELGPQGEAARVVTVLRDVLVAPEDPQAVLDAM
                     AAAAIHIVSLTVTEKGYCHEPSTGRLNRDHPDIAHDLAHPLPRSAPGFLVRALQARRR
                     AGLPPFTVLCCDNLPENGRVVRGVVLELARLIDPDLATWIDVEGAFPSTMVDRIVPAT
                     TAADLDRLEARTGQRDEAPVMHEPFRQWVVEDRFYGPRPALEQVGVQIVGDVTAFEHM
                     KLRMLNGTHSSLAYLGYLAGHETISDTVADPVFSAFVQRLWRNEIIPALTPPPGEDLA
                     AYADALLDRYRNPAIRHRTWQIAMDGSQKLPQRILGTIVEGRAAGRDVPGLILSVAAW
                     MRYASGTDEQGGPIEVKDPLAAKLAAQWARDPARTVANFLSLGQVFPPVLREDAAFVR
                     DLTAALAGLVQKGARAMAAEP"
     gene            complement(1404..2129)
                     /gene="kduD"
                     /locus_tag="EYO87_01095"
     CDS             complement(1404..2129)
                     /gene="kduD"
                     /locus_tag="EYO87_01095"
                     /EC_number="1.1.1.127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_353554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase
                     KduD"
                     /protein_id="HIC64598.1"
                     /translation="MNPFSLEGRTALVTGANTGIGQAIAVAMAQAGAEVIAAARRDCD
                     ETLALMGSGRALRLDFADPMAARDLFASERIDILVNNAGIIRRADAVDFTEADWDAVM
                     DVNMKALFFTCQAFARAALPRGAGKIVNIASLLSFQGGIRVPSYTASKHGVAGLTKLM
                     ANEWAARGLNVNAIAPGYIETNNTSALRADPDRSKAILDRIPAGRWGKPEDIAQTAVF
                     LSAPASGYVNGAVLNVDGGWLAR"
     gene            complement(2126..>2664)
                     /gene="kduI"
                     /locus_tag="EYO87_01100"
     CDS             complement(2126..>2664)
                     /gene="kduI"
                     /locus_tag="EYO87_01100"
                     /EC_number="5.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_357459.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="5-dehydro-4-deoxy-D-glucuronate isomerase"
                     /protein_id="HIC64599.1"
                     /translation="WDMQKGDVLYLGMGSGAVTFSGQGRFYLASAPAHRGLPCRLVTV
                     GEAKEVRLGAVETSNKRTIRQFIHPLVMESCQLVLGYTTLEDGSVWNTIPSHVHDRRM
                     EAYLYHGMAPEARVLHLMGEPQETRHLFVANEQAVISPTWSIHSGAGIGGYTFIWAMA
                     GDNVDYTDMDFVQPEDLR"
BASE COUNT          459 a          933 c          870 g          402 t
ORIGIN      
        1 acggctctgc cgccatggcc cgcgccccct tctgcaccag cccggccagc gccgccgtca
       61 gatcgcgcac aaaggccgca tcctcgcgca ggacgggcgg gaaaacctgg cccagcgaca
      121 ggaaattggc gactgtgcgg gcagggtcac gggcccattg cgcggccagc ttcgccgcca
      181 gcggatcctt gacctcgatc ggaccgccct gctcatcggt tccggaggca tagcgcatcc
      241 acgccgccac cgagaggatc agccccggca cgtcgcgccc cgctgcgcgg ccttcgacga
      301 tggtgcccag aatccgctgc ggcagcttct ggctgccatc catcgcgatc tgccatgtcc
      361 ggtgccggat ggccgggttg cggtatcgat ccagcagggc atcggcatag gcagccagat
      421 cctcgcccgg aggcggggtc agcgcaggaa tgatctcgtt gcgccaaagg cgctgcacga
      481 atgccgagaa gaccggatcg gccacggtgt cggaaatcgt ctcgtgtccc gccagataac
      541 ccagataggc cagcgatgaa tgggtgccgt tcagcatccg cagcttcatg tgttcgaacg
      601 cggtcacgtc gcccacgatc tgcacgccga cctgttccaa cgccggacgg gggccgtaga
      661 aacggtcctc gacgacccat tggcgaaagg gttcgtgcat gaccggggcc tcgtcgcgct
      721 ggcccgtccg ggcttccagc cggtccagat cggccgccgt cgtggcaggg acgatgcggt
      781 ccaccatggt cgaggggaaa gcgccctcga catcgatcca tgtcgccaga tcggggtcga
      841 tcagccgcgc cagttccagc acgacaccgc ggacgacgcg gccattttcg ggcaggttgt
      901 cgcagcacag gacggtgaag ggcggcaggc cggccctgcg gcgggcctga agggcgcgga
      961 ccagaaagcc gggggcggaa cgcggcagcg gatgggccag atcatgcgcg atgtcgggat
     1021 ggtcacggtt cagccgcccg gtcgaaggtt cgtggcaata gcccttttcg gtcaccgtca
     1081 ggctgacgat atggatcgcg gccgccgcca tcgcatccag caccgcctga ggatcctcgg
     1141 gcgcgaccag cacgtcgcgc agaaccgtca cgacccgcgc cgcctcgccc tgcggaccca
     1201 gttcgaccgc ctgataggcc cagccctgcg gccgcagccg gtcgcgggtg cccggcgatt
     1261 gcagcgaaac cccggtgacg ccccagtcgc cgcccccggc cgccatcgcc tcggccagat
     1321 agatcgcgcc atgggcgcgg aagaacgcac cgagccccag atggacgatg cccgccggag
     1381 cctcggacgg cgaccggaaa agcctatcgg gcaagccagc ctccgtccac gttcaggacc
     1441 gcgccgttga cgtaaccgga tgccggcgcc gacaggaaaa ccgccgtctg cgcaatgtct
     1501 tcgggcttgc cccaacgacc cgcggggatg cgatccagaa tggctttcga gcggtcggga
     1561 tcggcgcgca gggcgctggt gttgttggtc tcgatatagc cgggcgcgat ggcgttgacg
     1621 ttcaggccac gcgcggccca ttcattggcc atcagcttgg tcagacccgc cacgccatgc
     1681 ttgctggcgg tgtaggacgg cacccggatg ccgccctgaa aggacagcag cgaggcgatg
     1741 ttgacgatct tgccggcccc gcgcggcagc gcggcgcggg cgaaggcctg gcaggtgaag
     1801 aacagcgcct tcatgttcac atccatcacc gcatcccagt cggcctcggt gaaatccacc
     1861 gcatcggcgc ggcggatgat gcccgcatta ttgaccagaa tgtcgatccg ttccgatgcg
     1921 aagaggtccc gcgccgccat cggatcggcg aaatccaggc gcaacgcgcg acccgacccc
     1981 atcagcgcca gcgtctcgtc gcaatcgcgg cgtgctgcgg cgatcacctc cgcgccggcc
     2041 tgcgccatcg ccacggcgat cgcctgcccg atgcccgtat tcgcgccggt caccagcgcc
     2101 gtgcggccct ccagcgaaaa cgggttcacc gcagatcctc cggctgcacg aaatccatgt
     2161 cggtgtagtc gacattgtcg cccgccatcg cccagatgaa ggtatagccg ccgatccccg
     2221 cgccggaatg gatcgaccag gtgggcgaga tcaccgcctg ttcattggcc acgaacaggt
     2281 gccgggtttc ctgcggctcg cccatcaggt gcaggacgcg ggcctcgggg gccatgccat
     2341 gatacagata ggcctccatc cgccggtcgt gaacatggct gggaatggtg ttccagaccg
     2401 atccgtcctc cagcgtcgta tagcccagga ccagctggca gctttccatc accagcgggt
     2461 ggatgaactg gcggatggtg cgcttgttgc tggtctcgac cgcgcccagc ctgacctctt
     2521 tcgcctcgcc gaccgtgacc agccggcagg gcaatccgcg gtgcgcgggg gccgaggcga
     2581 ggtagaaccg cccctgcccc gaaaaggtca ccgcgcccga acccatgccc agatacagca
     2641 catcgccctt ctgcatgtcc cagg
//
LOCUS       DTVW01000084            3754 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1123388, whole
            genome shotgun sequence.
ACCESSION   DTVW01000084 DTVW01000000
VERSION     DTVW01000084.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3754)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3754)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3754
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1123388"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..339)
                     /locus_tag="EYO87_01105"
     CDS             complement(<1..339)
                     /locus_tag="EYO87_01105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64600.1"
                     /translation="MRLKLDIDPDLVAMMQAEIKAGEKAVTGAMREAGTGLKTAWRDQ
                     ITGAGLGRRLANSIRNATYPKAGDSLNATALVWSKAPVIIRAHNAGPLIRSRDGFWLA
                     IPTEAAGKSLR"
     gene            complement(336..650)
                     /locus_tag="EYO87_01110"
     CDS             complement(336..650)
                     /locus_tag="EYO87_01110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013654507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64601.1"
                     /translation="MNAFAAAMDRIFAHPEMSVSAVWIASGTSEERPIRLIRRAPDRI
                     TEFGSARILSKTLTADIRVSDLPDPRPGDLIVIGADSFAIQGEPVRDRDRLIWTVDLV
                     PA"
     gene            complement(662..1684)
                     /locus_tag="EYO87_01115"
     CDS             complement(662..1684)
                     /locus_tag="EYO87_01115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_355284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="major capsid protein"
                     /protein_id="HIC64602.1"
                     /translation="MTIIRNPFDAGGYSLAEMTQAINILPNLYTRLGELGLFRFEGVS
                     QRSVIIEQIEGVLNLLPSVPLGGPATVGSREGRAMRSFALPWIPHDDVILPADIQGVP
                     AIGAIDEADPLVAVMTRKLTLMRRKHAQTREYMEMNALRGIVKDGAGTTLYNYFTEFG
                     IAQISVDFVLGTAGTNIQGKVREVLRAVEDNLLGESMSGVHALVSREFFDKLISHPKT
                     EEAYKFYAATGAQPLRQDVRRNFPFAGILFEEYAGAVTLSTKASERLVPANEGIAFPT
                     GTMDTFTTYGGPANLLETANTIGLPLYARQHLDPKGRWIDLMTEASILPVNKRPRLAI
                     RLHSSN"
     gene            complement(1781..2161)
                     /locus_tag="EYO87_01120"
     CDS             complement(1781..2161)
                     /locus_tag="EYO87_01120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012561996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="head decoration protein"
                     /protein_id="HIC64603.1"
                     /translation="MPVLTQPPSMGHALKYELNPNYTRETITLAEGTEYPAGAVLGRV
                     TTSGQYTFASHGGSDGAETAAGILLYPVDTRLAEATGILLARGPAILSRDALFYDGSV
                     DDAAKIAAKHAELTALGIVIRDSA"
     gene            complement(2188..3570)
                     /locus_tag="EYO87_01125"
     CDS             complement(2188..3570)
                     /locus_tag="EYO87_01125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008032464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S49 family peptidase"
                     /protein_id="HIC64604.1"
                     /translation="MHHAQIAQRAFDTPLMIAPAKALAFLSGLGPRITGQEIRFDGMA
                     VAEPDLTATRQTARASLIGGDLARRHGDDADAPFPVIDGVAVITIAGTLVHRGAWIGQ
                     SSGLTSYEGLAAQIDAAVHEPAIRGIALEIDSFGGEVAGAFDLADRIRAARDKKPVHA
                     FLAEHALSAGYALASQAARITLPRTGAAGSIGVITMHTDMSGMLAQKGVAVTLIHAGA
                     QKADGNPYAALPDSIRHRLESELEDLRILFAQTVAAGRGAKLGKEAALATEAAIFRGA
                     AAVEAGLADAVSDPRAAFRAFADGLGRPALPVGRPTNSPTLSPPYPKQEMIMSDQTDE
                     DARTPDQQEPQAAAPTAQTAQQAAAESPAPGTAAAAAPRDATADAVRAEAAEVASICA
                     QAAKLGVTLDAADAVRRGVSPDALRGQILDSLAARSDASGILATAPVPTNTPSPLVAA
                     ARKSADSAQR"
     gene            complement(3570..>3754)
                     /locus_tag="EYO87_01130"
     CDS             complement(3570..>3754)
                     /locus_tag="EYO87_01130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019956321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phage portal protein"
                     /protein_id="HIC64605.1"
                     /translation="AAKRKREAALGLDFRRPGSPAQGPKGEADGEGTDATDGKDDDED
                     RSDDHDDDDAKPGEDR"
BASE COUNT          580 a         1163 c         1336 g          675 t
ORIGIN      
        1 gcgcagggat tttccggcgg cttccgtggg gatggccagc cagaatccgt cgcgtgaccg
       61 gatcagcggc ccggcgttgt gggcgcggat gatgaccggc gccttggacc agaccagcgc
      121 ggtggcgttc aggctgtcgc ccgctttcgg ataggtggcg ttgcggatcg aattcgccag
      181 gcgccgtccc agcccggcgc cggtgatctg gtcgcgccat gcggtcttga ggcccgtgcc
      241 cgcctcgcgc atggcaccgg tcacggcctt ttcgcctgcc ttgatctcgg cctgcatcat
      301 ggcaacgaga tcgggatcga tatcgagctt cagcctcatg cgggcaccag gtccacggtc
      361 cagatcaacc ggtcgcggtc ccggacgggc tcgccctgta tcgcaaagct gtctgcgccg
      421 atgacgatca gatcgcccgg ccggggatcg gggagatcgc tgacccggat atcggcggtc
      481 agcgttttcg acaggatgcg ggccgatccg aattcggtga tccggtccgg tgcgcggcgg
      541 atgagccgga tcgggcgctc ttccgatgtg ccgctcgcga tccagacagc agataccgac
      601 atctccggat gcgcgaagat ccggtccatg gcggcagcaa aggcgttcat ggcgttgccg
      661 gtcagttcga gctgtgcagc cggatcgcca gccggggccg cttgttgacc ggcaggatcg
      721 aggcctcggt catcagatcg atccaacggc ccttgggatc gagatgctgg cgggcataga
      781 gcggcagacc gatggtattg gcggtttcca agaggttggc cggaccgcca taggtcgtga
      841 aggtgtccat ggtgccggtc ggaaaggcga tgccttcgtt ggccgggacc agccgttccg
      901 atgctttggt cgagagcgtg acagcacccg catattcctc gaagaggatg cctgcgaacg
      961 ggaagttgcg acggacatcc tgccgcagcg gctgggcgcc ggtcgcggcg tagaatttat
     1021 acgcttcctc ggtcttcggg tgcgagatca gcttgtcgaa gaattcgcgg ctgaccagcg
     1081 catggacgcc cgacatgctc tcgcccagca gattgtcctc gacggcgcgc agcacctcgc
     1141 ggaccttgcc ctggatgttt gtgccggcgg tgcccagcac gaaatcgacg ctgatctgag
     1201 caatcccgaa ttcggtgaag taattgtaga gcgtggtccc ggccccatcc ttcacgatgc
     1261 cgcgcagcgc gttcatctcc atatattccc gggtctgggc atgtttgcgg cgcatcaggg
     1321 tcagtttgcg ggtcatcacc gcgaccagcg gatcggcctc gtcaattgcg ccgatggccg
     1381 gaaccccctg aatatcggcg ggcaggatca catcgtcatg cgggatccag ggcaacgcaa
     1441 aactgcgcat ggcgcggccc tcgcggctgc cgaccgtggc cgggcctccc aaggggaccg
     1501 agggcaggag gttcagcacg ccttcgatct gttcgatgat gacgctgcgc tgggagacac
     1561 cctcgaagcg gaagaggccc aactcaccga gccgggtata gaggttcggc aggatattga
     1621 tggcctgcgt catctcggcc agcgaatagc cgccggcatc gaagggattg cggatgatgg
     1681 tcatggggaa accttgtcgg gaaggggagg agaggatctt ggtcgagccg gttcgtaacc
     1741 tccgggtggg ttcgcgaccc ccgggccggt tcgcaaccgg tcaggcgctg tcgcggatga
     1801 cgatgcccag cgcggtcagt tccgcatgtt tggcagcgat cttggccgcg tcatcgacgc
     1861 tgccatcgta gaagagcgcg tcgcgcgaca ggattgcggg gccacgggcc agcaggatgc
     1921 cggtggcctc cgccagccgc gtatcgaccg gatagagcag aatgccagcg gcggtttccg
     1981 cgccatcgct gccgccatgg ctggcaaagg tgtactggcc gctggtggtg acgcggccca
     2041 gaaccgcacc ggcgggatat tcggtgccct ctgccaaggt gatggtctcg cgggtataat
     2101 tggggttcag ctcatatttg agcgcatggc ccatgctggg cggttgggtc agaacgggca
     2161 ttggggtctc cggaaggtgt caggcgatca gcgttgggcg ctgtcggcgg atttgcgggc
     2221 cgcagccacg agcgggctcg gcgtgtttgt gggcactggc gcggtggcca gaatcccgct
     2281 ggcgtcgctt ctggccgcaa ggctgtcgag gatctgaccg cgcagggcat cggggcttac
     2341 gccgcgccgc accgcatcgg cggcgtccag ggtgacgccc agcttggcgg cctgcgcgca
     2401 gatcgaagcg acttcagcgg cctcggcacg gacggcatcg gcggtggcat cgcgcggggc
     2461 cgcagccgct gcggtgccgg gcgcgggtga ttccgccgcc gcttgttggg ccgtctgcgc
     2521 tgtgggtgct gcggcttgcg gctcttgctg gtccggtgtc cgggcatctt catccgtctg
     2581 atcgctcatg atcatctcct gcttggggta gggtggtgaa agggtcgggg aattcgtcgg
     2641 tcgcccgacc ggcaatgccg ggcggccgag accgtcggca aaggcgcgaa aggcggcacg
     2701 gggatcggag acggcatcgg cgagaccggc ttcgacagcc gccgcgcccc ggaagatggc
     2761 ggcttcggtc gccagcgcag cctccttgcc gagcttcgcc ccgcgcccgg cggcgaccgt
     2821 ctgggcgaaa aggatccgca gatcctccag ctccgactcc agccggtggc ggatgctgtc
     2881 gggcagggcg gcatagggat tgccatcggc cttttgggcc ccggcatgga tcagggtcac
     2941 cgccacgcct ttctgggcca gcatgccgga catgtcggta tgcatggtga tgacaccgat
     3001 gctgcccgcc gccccggtgc ggggcagggt gatgcgggcc gcctgcgagg ccagcgcgta
     3061 accagctgag agcgcatgtt cggcgaggaa cgcgtgcacc ggctttttat cacgcgccgc
     3121 gcggatgcgg tcggcgagat cgaaagcccc ggcgacctcg ccgccgaaac tgtcgatctc
     3181 cagcgcgatg ccacgaatgg cgggttcatg aaccgccgca tcgatctggg cggcgaggcc
     3241 ctcataggag gttaggcccg aactctgccc gatccaggcg ccgcgatgga ccagcgttcc
     3301 ggcgatggtg atcaccgcca cgccatcgat caccgggaac ggcgcatcgg catcatcgcc
     3361 atgcctcctg gccagatcgc cgccgatcag cgaggcgcgg gctgtctgac gcgtggccgt
     3421 cagatcgggt tcggcgaccg ccatgccgtc aaagcgaatt tcctgccctg tgatgcgggg
     3481 tccgaggccg gagagaaagg ccagtgcctt ggccggggcg atcatcaacg gcgtgtcgaa
     3541 ggcgcgctgg gcgatctggg cgtgatgcat cagcggtcct ccccgggttt ggcgtcgtca
     3601 tcgtcgtggt cgtcggatcg atcttcgtca tcgtctttgc cgtcggtggc gtcggtacct
     3661 tcgccatcag cctcaccctt cggcccctgc gcgggcgagc cggggcggcg gaaatcgagg
     3721 cccagcgccg cttcgcgttt ccgtttggcg gcga
//
LOCUS       DTVW01000085            1005 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1124700, whole
            genome shotgun sequence.
ACCESSION   DTVW01000085 DTVW01000000
VERSION     DTVW01000085.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1005)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1005)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1005
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1124700"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..258
                     /locus_tag="EYO87_01135"
     CDS             <1..258
                     /locus_tag="EYO87_01135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HIC64606.1"
                     /translation="LFMIIIGGLGSVFGSFAGAAFMVLLPVLLKNLLVGGFGWPTNLA
                     AHIELMIVGGLIILFLIVEPHGLARLWRLAKEKLRLWPFPH"
     gene            311..>1005
                     /locus_tag="EYO87_01140"
     CDS             311..>1005
                     /locus_tag="EYO87_01140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HIC64607.1"
                     /translation="MKTKLTALALAATLAAAAPAMAELVVPSLSYRTGPYGANGTQYA
                     DGFTDYFTLLNERDGGIGGERIQVPECETAYNTEKGVECYEATKDTGALVYNPLSTGI
                     TYQLIPKVSVDKKVLYTPGYGRTSAKNGKVFEWVFNAPANYWDGASVAIKYLLDENGG
                     DLSGKKIALVYHNSAYGKEPIRTLQKLSEKHGFELSEIPIDPPGQEQKSQWLQVRRER
                     PDYVIMYGWGVMN"
BASE COUNT          211 a          291 c          320 g          183 t
ORIGIN      
        1 ctgttcatga tcatcatcgg agggctgggc agcgtcttcg gcagtttcgc cggcgcggcc
       61 ttcatggtcc tgttgccggt cctgctgaag aatctgctgg tgggcgggtt tggctggccc
      121 accaatctgg ccgcgcatat cgaactgatg atcgtgggcg gactgatcat ccttttcctg
      181 atcgtcgagc cgcacggtct ggcccggctg tggcgactgg cgaaggaaaa gctgcggctc
      241 tggccgttcc cgcattgacg cagaagaccg ggacggaccc ggccaaaatc atcttgggga
      301 ggagacccga atgaagacga aactgaccgc attggcactg gccgcgaccc tggccgcggc
      361 cgcgcccgcc atggccgaac tggtcgtgcc cagcctcagc tatcggaccg gcccctacgg
      421 ggcgaacggc acgcaatatg ccgacggctt taccgattac ttcacgctgc tcaatgaacg
      481 cgacggcggt atcggcggcg aaaggatcca ggtccctgaa tgcgagaccg cctataacac
      541 cgaaaagggc gtcgagtgtt acgaggcgac caaggacacc ggcgcgctgg tctataatcc
      601 gctgtccacc ggcatcacct atcagctgat tccgaaggtc agcgtggaca agaaggtgct
      661 gtatacgccc ggttacggac gcacctcggc caagaacggc aaggtcttcg aatgggtctt
      721 caacgctccg gcgaattact gggacggggc ctcggtggcg atcaagtatc ttctggacga
      781 gaatggcgga gatctgagcg gcaagaagat cgcgctggtc tatcataaca gcgcttatgg
      841 caaggaaccg atccgcacgt tgcagaagct gtccgagaag cacggcttcg aattgtccga
      901 gattccgatc gacccgccgg ggcaggagca gaaaagccag tggctgcagg tccgccgcga
      961 aaggcccgat tacgtaatca tgtatggctg gggcgtgatg aacca
//
LOCUS       DTVW01000086            1369 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1127047, whole
            genome shotgun sequence.
ACCESSION   DTVW01000086 DTVW01000000
VERSION     DTVW01000086.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1369)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1369)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1369
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1127047"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..151)
                     /locus_tag="EYO87_01145"
     CDS             complement(<1..151)
                     /locus_tag="EYO87_01145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family protein"
                     /protein_id="HIC64608.1"
                     /translation="MMIRSIAAALALFLAAPAIAQDAAPAEQGQVEILPDITMGAEDA
                     PLTIFE"
     gene            complement(148..696)
                     /locus_tag="EYO87_01150"
     CDS             complement(148..696)
                     /locus_tag="EYO87_01150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF721 domain-containing protein"
                     /protein_id="HIC64609.1"
                     /translation="MAQANDNSRKGSRRRRRGFEAASSLLAERVQKAAEGRGFAVSRL
                     LTHWPEIAGDKLAGLTRPVRISHGRGSFGATLTLLTTGPVAPMVEMQLPQLRDRVNAC
                     YGYNAIQKIVLTQTAATGFAEGQARFAPAPQVPAQPDPESRAAASRVAGQFDDPVLAE
                     AMARLALNVAARRKRSTRKDNP"
     gene            797..>1369
                     /locus_tag="EYO87_01155"
     CDS             797..>1369
                     /locus_tag="EYO87_01155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="A/G-specific adenine glycosylase"
                     /protein_id="HIC64610.1"
                     /translation="MIATDLLDWYDRHARILPWRVRPGHGRADPYRVWLSEVMLQQTT
                     VAAVKDYFLRFTALWPTVEDLAAAEDARVMAEWAGLGYYARARNLLACARIVAARGGF
                     PDTRDGLRALPGIGAYTSAAIAAIAFEQPETVVDGNVERVVSRLFAVPSPLPAAKPEL
                     TTLAETLTPRERPGDFAQAMMDLGATICTPR"
BASE COUNT          204 a          465 c          467 g          233 t
ORIGIN      
        1 attcgaagat ggtcagcggc gcgtcctcgg cgcccatcgt gatgtcgggc aggatctcga
       61 cctggccctg ttcggccggg gcggcgtcct gggcgatggc gggcgcggcc agaaacagcg
      121 caagcgctgc cgcgatagag cggatcatca tggattgtcc tttcgggttg accgttttct
      181 gcgggccgcg acgttcagcg caagccgcgc catcgcctcg gccagaacgg gatcgtcgaa
      241 ttgcccggcc acgcgacttg cggcggcgcg gctttcggga tcgggctgcg cgggaacctg
      301 cggcgccggc gcaaaccggg cctggccttc ggcgaaaccc gtcgcggcgg tctgggtcag
      361 cacgatcttc tggatcgcgt tatagccata gcaggcattc acccggtcgc gaagctgggg
      421 cagctgcatc tcgaccatcg gtgcgacggg accggtcgtc agcagcgtca gcgtcgcgcc
      481 gaaactgccg cggccgtggc tgatgcgaac cggccgggtc aggccggcca gcttgtcgcc
      541 ggcaatctcg ggccagtggg tcagcagccg ggaaaccgcg aagccacgcc cctcggccgc
      601 cttctgcacc cgctcggcca gcagcgatga tgcggcctcg aagccgcgcc tgcgacgacg
      661 ggaccccttc ctgctgttgt cattcgcctg tgccatctgt gcccgttctg gtatcacccc
      721 tttattctta gccagaggac accggcgatg aaagcgtggt cgctgaaacg gagcctgata
      781 attgcgtgac ggcaggatga tagcgacgga cctgctggac tggtatgacc gtcacgcccg
      841 gattctgccg tggcgggtcc ggcctgggca cgggcgggcc gatccatacc gggtctggct
      901 gtccgaggtg atgctgcagc agaccaccgt tgcggcggtg aaggattatt tcctacgctt
      961 caccgcgctg tggcccaccg tcgaggacct ggccgccgcc gaggatgcgc gggtcatggc
     1021 ggaatgggcc ggcctcggct attacgcccg cgcccgcaac ctcttggcct gcgcccgcat
     1081 cgtggccgca agaggcggat ttcccgatac gcgcgacggc ttgcgcgcgc tgccggggat
     1141 cggcgcctat acgtccgccg cgatcgccgc catcgccttc gagcagccgg aaacggtcgt
     1201 cgatggcaat gtcgagcgcg tcgtgtcgcg tcttttcgcg gtgccgtccc cgctgcccgc
     1261 cgccaagccc gaactgacga ccctcgcaga aaccctgacg ccgcgcgaaa ggcccggcga
     1321 tttcgcccag gcgatgatgg atctgggcgc cacgatctgc accccgcgc
//
LOCUS       DTVW01000087            1997 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1129796, whole
            genome shotgun sequence.
ACCESSION   DTVW01000087 DTVW01000000
VERSION     DTVW01000087.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1997)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1997)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1997
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1129796"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..277
                     /locus_tag="EYO87_01160"
     CDS             <1..277
                     /locus_tag="EYO87_01160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009503111.1"
                     /note="catalyzes the formation of 3-methylbut-2-enoyl CoA
                     from 3-methylbutanoyl CoA; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="isovaleryl-CoA dehydrogenase"
                     /protein_id="HIC64611.1"
                     /translation="SLSLRTAAMCEGLEEGEGGRGEIHKLTAAAIYKAAEATSFVLDR
                     AVQIHGGSGYMRDTEVNRLYRTGRVLEVGAGTQEVRKLIISGELLKN"
     gene            287..1141
                     /locus_tag="EYO87_01165"
     CDS             287..1141
                     /locus_tag="EYO87_01165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009803494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HIC64612.1"
                     /translation="MSEAKSRRYASDLMAGQVALVTGSGSGMGRATAIEMAACGARLA
                     LFARREEPLEETAEMIRAAGGEAFVVPGDTRDEDSIETAMGRIKDHYGQLDVLVNNAG
                     GQYIAAARDITNKGFEAVIRNNLIGSWQMTRAAADHFMYENGGSVVFVTAISARTALT
                     GFTHTVAARAGVTGMMKTLAAEWGEYGIRLNCVAPGTIKTDALGRYPIPPEQWKKLNR
                     SVLNRMGAAEDIAGTIIFLASKLGGFITGEDIYVDGGETLHMGHDARDMINPAMFEKR
                     ERGDGKNE"
     gene            1134..1937
                     /locus_tag="EYO87_01170"
     CDS             1134..1937
                     /locus_tag="EYO87_01170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009803495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase"
                     /protein_id="HIC64613.1"
                     /translation="MSKHPVLLEISDRIATVTLNDPERRNPVTGNDMIAALLETFAKV
                     QADPQVSVMILTGADPAFCAGGDIKEMNDPDSVFRKEPLAAAQSYVDGVQRLPLALYN
                     MDIPTIAAVNGPAVGAGCDLTMMCDMRIASEKARFGEVFLNLGIIPGDAGSWFLLRRL
                     GHQKAADLTFSGRMVEAKEALELGMVLELVPHEKLMERARERAAVIAAKPPRAVRVAK
                     RLMRNAERMDLPDFLNSAAAYQALMHQTEDHHEAVAAFVEKRKPNFTGR"
BASE COUNT          422 a          564 c          655 g          356 t
ORIGIN      
        1 cagcctgtcc ttgcgcaccg ctgccatgtg tgaaggcctc gaagagggcg aaggcgggcg
       61 cggcgaaatc cacaagctta ccgctgcggc gatctacaag gccgctgagg cgacatcctt
      121 cgtgctcgac agggccgtcc agattcacgg cggctcgggt tacatgcgtg atacagaagt
      181 gaaccggctg taccggaccg gtcgcgtact tgaggtcggc gcaggcaccc aggaggttcg
      241 caaactcatc atctctggcg aattgctgaa gaactagggg cggaacatga gcgaagcgaa
      301 atcaaggcgt tacgcgtcgg atctcatggc gggccaggtt gccctggtta cgggatccgg
      361 atctggaatg ggccgggcga cggcgatcga aatggccgct tgcggggcca ggcttgcgct
      421 gttcgcgcgc cgcgaagagc cgctggaaga gaccgccgaa atgatccgcg cggcgggggg
      481 cgaggccttt gtcgtgcccg gagacacccg cgacgaagac agtatcgaaa ctgcgatggg
      541 gcggatcaag gaccactatg ggcagttgga tgttttggtg aacaatgccg gcggtcagta
      601 tatcgcggcc gcccgcgata tcaccaacaa gggctttgaa gctgtgatcc gcaacaacct
      661 gatcgggtct tggcaaatga cccgcgccgc tgccgatcat ttcatgtacg aaaatggtgg
      721 atcggttgtg tttgtcaccg ccatctcggc gcgcaccgcg ctcaccggct ttacacacac
      781 cgtcgcggcc cgcgccggtg tgacgggcat gatgaaaacg ctggccgccg aatggggcga
      841 gtacggcatc cggctgaact gcgttgcacc gggcacgatc aagaccgatg cgcttggccg
      901 ctatcccatt ccgccggaac agtggaaaaa gctgaaccgt tcggtcctga accggatggg
      961 cgcggccgag gacatcgcag gcacgatcat attcctggct tcgaaacttg gcggtttcat
     1021 taccggcgag gacatctatg tagacggcgg tgagaccctg cacatgggtc atgacgcgcg
     1081 ggacatgatc aaccccgcga tgttcgagaa acgcgaacgg ggagatggca agaatgagta
     1141 aacacccagt ccttctggag atttccgaca ggatcgccac ggtaacgctg aacgaccccg
     1201 agcgtcgcaa tccggttacc gggaacgaca tgatcgctgc ccttctggag accttcgcca
     1261 aggtgcaggc cgatccgcag gtcagcgtga tgattctgac cggggccgac ccggcctttt
     1321 gtgccggcgg ggacatcaag gagatgaacg atcccgacag tgtgttccgc aaggagccgc
     1381 tggcggcggc gcagagctat gttgatgggg tgcagcggct gccgcttgcg ctctacaaca
     1441 tggatattcc gaccatcgcc gcagtcaacg gcccggcggt gggcgcgggg tgcgacctga
     1501 ccatgatgtg cgacatgcgc atcgcttcgg aaaaagcaag gttcggcgag gtgtttctga
     1561 atctcggaat cattccgggc gatgcgggca gctggttcct gttgcgtcgt ctgggccacc
     1621 agaaggccgc cgatctgacc ttctcagggc gcatggtcga ggccaaggaa gcgctggagc
     1681 ttggtatggt gcttgaactt gtgcctcatg aaaaattgat ggaacgggcc cgcgaacggg
     1741 ccgctgtcat cgccgcgaaa ccgccgcgcg cggtgcgggt cgccaagcgt ctgatgcgca
     1801 atgccgaacg gatggacctg ccggatttcc tgaattccgc ggcggcctat caggcgctca
     1861 tgcatcagac cgaagaccac cacgaggcgg ttgctgcgtt cgtcgaaaaa cgaaaaccca
     1921 atttcacggg gcgttaaagg aaagatcgca tgtcagacat cacccaaaag aagatggagc
     1981 aaatcgcgca gatgtgg
//
LOCUS       DTVW01000088            1410 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1130017, whole
            genome shotgun sequence.
ACCESSION   DTVW01000088 DTVW01000000
VERSION     DTVW01000088.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1410)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1410)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1410
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1130017"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1410)
                     /locus_tag="EYO87_01175"
     CDS             complement(<1..>1410)
                     /locus_tag="EYO87_01175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_354231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glutamate synthase large subunit"
                     /protein_id="HIC64614.1"
                     /translation="AQGAKPGEGGQLPGMKVTKLIARLRHSTPGVTLISPPPHHDIYS
                     IEDLAQLIYDLKQINPRAKITVKLVASSGVGTIAAGVAKAKADVILISGHNGGTGASP
                     ATSIKFAGLPWEMGLTEAHQVLAMNRLRERVTLRTDGGLRTGRDIVMAAMMGAEEYGI
                     GTAALIAMGCIMVRQCQSNTCPVGVCTQDEKLRAMFTGSADKVVNLITFYAQEVREIL
                     ASIGARSLDEVIGRADLLTQVSRGAANLDDLDLNPLLITVDGADKIVYDRTKPRNAVL
                     DTLDSDIVKDAARFFEDGEKMQLSYAVRNTLRTIGTRTSSMIVQKFGMRNNLQPDHLT
                     VRLTGSAGQSLGAFAAPGLKLEVSGDANDYVGKGLSGGIITVRPPMASPLIAAENTII
                     GNTVLYGATAGYLFAAGRAGERFAVRNSGAHVVIEGCGSNGCEYMTGGVAVILGSIGA
                     NFGAGMTGGMAYLYDPQGV"
BASE COUNT          234 a          473 c          451 g          252 t
ORIGIN      
        1 caacgccctg cggatcatac agataggcca tgccgccggt catgccggcg ccgaaattgg
       61 cgccgatgct gccgaggatc accgcgacgc caccggtcat gtattcgcag ccattgctgc
      121 cgcagccctc gatcacgaca tgggctccgg aattgcgcac cgcgaaacgc tcgcccgcgc
      181 ggccggccgc gaacagatag cctgccgtcg cgccataaag cacggtgttg ccgatgatcg
      241 tgttctcggc cgcgatcagc ggcgaggcca tcggcgggcg cacggtgata atgcccccgg
      301 acaggccctt gccgacgtag tcgttggcat cgccggacac ttccagcttc agccccggcg
      361 cggcaaacgc gcccagcgat tgcccggcgc tgccggtcag ccgcaccgtc aggtggtcgg
      421 gctgcaggtt gttgcgcatc ccgaatttct gcacgatcat gctggacgtg cgcgtgccga
      481 tggtgcgcag cgtgttgcga accgcgtagg acaactgcat cttctcgcca tcctcgaaga
      541 agcgggcggc gtccttgacg atatcggaat ccagcgtgtc cagaaccgcg ttgcgcggct
      601 tggtgcggtc atagacgatc ttgtccgcgc catcgacggt gatcagaagc gggttcagat
      661 ccagatcgtc aagattcgct gcgccccgac tgacctgggt cagcagatcg gcccggccga
      721 tcacctcatc cagcgaacgt gcgccgatgc tggccaggat ttcccgcacc tcctgcgcgt
      781 agaaggtgat caggttgacc accttgtcgg cgctgccggt gaacatggcg cgcaatttct
      841 cgtcctgcgt gcagacaccc acggggcagg tgttggattg gcactggcgg accatgatgc
      901 agcccatcgc gatcagggcc gcggtgccga tgccgtattc ctcggccccc atcatcgccg
      961 ccatgacgat gtcgcgaccg gtgcgcaggc cgccatcggt gcgcagcgtc acccgttcgc
     1021 gcagccggtt catggccaga acctgatgcg cctcggtcag ccccatttcc cagggcaggc
     1081 cggcgaactt gatcgaggtc gcagggctgg ccccggtgcc gccattatgg ccggagatca
     1141 ggatcacgtc cgccttggcc ttggccacgc cggccgcgat ggtgccgaca ccggaagagg
     1201 cgaccagctt cacggtgatc ttggcgcgcg gattgatctg cttcaggtca tagatcagct
     1261 gcgccagatc ctcgatgctg tagatatcgt gatgcggtgg cggcgagatc agtgtcacgc
     1321 ccggcgtcga atgacgcagc cgcgcgatca gcttggtgac cttcatcccc ggaagctgcc
     1381 cgccctcgcc gggcttggcg ccctgggcca
//
LOCUS       DTVW01000089            1632 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1130352, whole
            genome shotgun sequence.
ACCESSION   DTVW01000089 DTVW01000000
VERSION     DTVW01000089.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1632)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1632)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1632
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1130352"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..993)
                     /locus_tag="EYO87_01180"
     CDS             complement(<1..993)
                     /locus_tag="EYO87_01180"
                     /inference="COORDINATES: protein motif:HMM:PF01963.15"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraB/GumN family protein"
                     /protein_id="HIC64615.1"
                     /translation="MAACAERIARQERAGMNRVLLAGVLMLWSGGAAATAECVGTDLI
                     AALPQDQREQLDRAVADAPFNRGILWQARKDTMVMTLVGTFHFADPRHDSTMRRLSGP
                     MQDAAALYVEAGPKEKARLKQALAEDPTLMVNPDGATLPERLSGAEWSLLSDAMALRG
                     TPAIVTAKLRPWYVAMMLGISPCMMRQMAGNGAEGGGLDDRLIQSAQAVDLPVRALEP
                     WNTIFALFRDLSPAQELDMIRASLPMAAHADDYAVTLANAYFRGDVWAIWEFSRQDAY
                     RESGLDRQSVDEQMTLARTQLMDRRNQSWIAPLTRGAAEAAKSGKGIIAGFGALH"
     gene            1139..1426
                     /locus_tag="EYO87_01185"
     CDS             1139..1426
                     /locus_tag="EYO87_01185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HIC64616.1"
                     /translation="MAFKPLHDRVLVRRVESDEKTKGGLIIPDSAKEKPAEGEIISVG
                     EGARKDSGELIAPSVKAGDRILFGKWSGTEVTIDGEELLIMKESDILGIIA"
     gene            1469..>1632
                     /gene="groEL"
                     /locus_tag="EYO87_01190"
     CDS             1469..>1632
                     /gene="groEL"
                     /locus_tag="EYO87_01190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352366.1"
                     /note="60 kDa chaperone family; promotes refolding of
                     misfolded polypeptides especially under stressful
                     conditions; forms two stacked rings of heptamers to form a
                     barrel-shaped 14mer; ends can be capped by GroES;
                     misfolded proteins enter the barrel where they are
                     refolded when GroES binds; many bacteria have multiple
                     copies of the groEL gene which are active under different
                     environmental conditions; the B.japonicum protein in this
                     cluster is expressed constitutively; in Rhodobacter,
                     Corynebacterium and Rhizobium this protein is essential
                     for growth; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HIC64617.1"
                     /translation="MAGKEVKFSTDARDRMLKGVNILADAVKVTLGPKGRNVVIDKSF
                     GAPRITKDGVT"
BASE COUNT          318 a          546 c          492 g          276 t
ORIGIN      
        1 atgcagcgcg ccgaatcccg cgatgatgcc cttgccggat ttcgcggcct cggccgcgcc
       61 ccgggtcagt ggcgcgatcc agctttggtt gcgccgatcc atcaactgcg tcctggccag
      121 cgtcatctgt tcatcgacag actgccggtc cagaccggat tcgcgatagg cgtcctgtcg
      181 gctgaattcc cagatcgccc agacatcacc ccggaaatag gcgttggcca gcgtcacggc
      241 ataatcgtcg gcatgggccg ccatcggcag cgaggcgcgg atcatgtcca gttcctgcgc
      301 ggggctcaga tcccggaaca gggcgaagat ggtgttccag ggctccaatg cgcgaacggg
      361 caggtcaacg gcctgtgcgc tctggatcag cctatcatcc aggccgccgc cctcggcgcc
      421 attcccggcc atctgccgca tcatgcaggg actgattccc agcatcatcg ccacgtacca
      481 cggccgcagc ttcgcggtca cgatcgcagg cgttccgcgc agggccatcg catccgacag
      541 cagcgaccat tccgccccgg acagacgctc gggcagggtc gcgccgtcgg ggttcaccat
      601 cagcgtcgga tcctcggcca gggcctgctt cagccgcgcc ttttccttcg gtcccgcctc
      661 gacatacagc gcggcggcgt cctgcatggg cccggacagc cgccgcatcg tcgaatcgtg
      721 acgcggatcg gcgaaatgga aggtgccgac cagcgtcatg accatggtgt ccttgcgggc
      781 ctgccacaga atgccccggt tgaaaggcgc atcggcaacc gcgcggtcaa gctgttcgcg
      841 ctgatcctgc ggcagggcgg cgatcaggtc ggtgccgaca cattccgccg tggccgcagc
      901 cccccccgac cacagcatca gcacgccagc caacaagacc cgattcatgc ctgccctttc
      961 ttgtctggca atccgttccg cacaggctgc catatccgcc cggcagcgac cagccgaagc
     1021 gcgatttttg tccgcttgcg gcgttgacac cggccgtgac caagcctaga tcaccgccat
     1081 tggcactcat agagagtgag tgccaacagc actgcaacct gaaacacgga gtgttccaat
     1141 ggcattcaaa ccgctgcatg accgggttct ggtccgccgc gtcgaatccg acgaaaagac
     1201 caagggcggc ctgatcattc cggacagcgc caaggaaaag cccgccgagg gcgagatcat
     1261 ctcggtcggc gagggcgcgc gcaaggattc gggcgagctg atcgcaccgt cggtcaaggc
     1321 gggtgatcgc atcctgttcg gcaaatggtc gggcaccgaa gtcaccatcg acggcgaaga
     1381 gctgctgatc atgaaggaaa gcgacatcct gggcatcatc gcctgagatc cgtcccgctt
     1441 ccttcaacga taaattcagg agaaacaaat ggctggtaaa gaagtcaagt ttagcacgga
     1501 tgcccgtgac cggatgctga aaggcgtcaa cattctggcc gacgccgtga aggtcacgct
     1561 gggccccaag ggtcgcaacg tcgtcatcga caagtccttc ggtgcacccc ggatcaccaa
     1621 ggacggcgtc ac
//
LOCUS       DTVW01000090            1293 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1130457, whole
            genome shotgun sequence.
ACCESSION   DTVW01000090 DTVW01000000
VERSION     DTVW01000090.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1293)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1293)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1293
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1130457"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..904)
                     /locus_tag="EYO87_01195"
     CDS             complement(<1..904)
                     /locus_tag="EYO87_01195"
                     /inference="COORDINATES: protein
                     motif:HMM:PF01520.16,HMM:PF11741.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HIC64618.1"
                     /translation="MRVAALILALLLGLLAEGAAAQEQPARPDLGASALVRTGRGWWG
                     RPPPLELRLTLDRAVPYRAYLVADPARLIVDLEGVDFSGLDAADLFGADNVPAIRWGR
                     FRRGWGRIVVELPGPYRIEKAGQDTRRPAPEIRVSLSPVKEADFAPRPSATTAMQNLP
                     PPVKQDAMPPKPALKVVLDPGHGGFDPGAEAGGETEADLVLTFGQELRDALEERGIEV
                     VMTREDDIFVRLDNRPTIARTEAADLFISLHADALPEGQAAGATIYVWNPASNARAAS
                     QLTLRHDRDDLLTGVDLSGQDDALA"
     gene            complement(901..>1293)
                     /locus_tag="EYO87_01200"
     CDS             complement(901..>1293)
                     /locus_tag="EYO87_01200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_353042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HIC64619.1"
                     /translation="ERLAQNLFICPPHASQVAALAALDCIDEAEANLAVYSENRRLML
                     EALPKAGFARIAPPEGAFYVYADVSELTPDSRAFAAEILDRAGVAVTPGLDFDPQRGA
                     RTLRFSYARSTADIAEGLRRLERFMAQR"
BASE COUNT          228 a          468 c          408 g          189 t
ORIGIN      
        1 cggccagggc atcatcctgt cccgacagat cgaccccggt cagcagatcg tcgcggtcat
       61 ggcgcagcgt cagttgcgag gccgcgcgcg cattcgaggc cgggttccag acatagatcg
      121 tcgcccccgc cgcctgcccc tcgggcaagg catcggcatg aagcgagatg aacagatccg
      181 cagcctcggt tcgcgcgatg gtcggacggt tgtccagccg gacgaatatg tcatcttcgc
      241 gcgtcatcac cacctcgatg ccgcgttcct ccagcgcgtc gcgcaattcc tgtccgaagg
      301 tgagaacaag atcggcctcg gtctctccac cagcctcggc gcccgggtcg aaaccgccat
      361 ggccgggatc cagcaccacc ttcagcgcgg gtttcggcgg catggcgtcc tgcttgaccg
      421 ggggcggcag gttctgcatc gccgtcgtcg ccgaggggcg cggcgcgaaa tcggcctcct
      481 tcaccggtga cagcgagacg cggatctcgg gcgcggggcg gcgggtatcc tgaccggcct
      541 tctcgatccg gtagggtccg ggcagttcca ccacgatccg cccccagccg cgccggaacc
      601 ggccccagcg gatcgcgggc acattgtcgg caccgaacag atccgccgcg tcaagcccgc
      661 tgaaatcgac gccctcaaga tcgacgatca gccgcgccgg atcggcaacc agataggcgc
      721 gatagggcac cgcccggtcc agcgtcaggc gcagttccag cggcggtggc cggccccacc
      781 agccgcgccc cgtccgcacc agcgccgatg cacccagatc gggccgcgcc ggttgttcct
      841 gtgccgccgc accctcggcc agcaacccca gcagcagcgc aaggatcagc gccgcaaccc
      901 tcatctttgg gccatgaacc gttccagccg ccgcaatccc tcggcaatgt ccgcggtcga
      961 gcgggcatag gaaaagcgca atgtgcgcgc gccccgctgg ggatcgaaat ccagccccgg
     1021 cgtaaccgcg acaccggccc tgtcaagaat ctcggccgca aaggcccgcg aatccggggt
     1081 cagttccgag acatcggcat agacataaaa ggcgccctcc ggcggtgcga tcctggcaaa
     1141 gcctgctttc ggcagcgcct ccagcatcaa gcggcgattt tcggaataga cggccagatt
     1201 ggcctcggcc tcgtcgatgc aatccagcgc cgcaagcgcc gcgacctggc tcgcatgggg
     1261 cgggcagatg aacaggttct gcgccaaacg ttc
//
LOCUS       DTVW01000091            5586 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1132445, whole
            genome shotgun sequence.
ACCESSION   DTVW01000091 DTVW01000000
VERSION     DTVW01000091.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 5586)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5586)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5586
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1132445"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..686
                     /locus_tag="EYO87_01205"
     CDS             <1..686
                     /locus_tag="EYO87_01205"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011747587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HIC64620.1"
                     /translation="YAGNRHNIGFMAVDRIATDHDLGPWRARFQGQSIEARLGENRIA
                     LLKPGTFMNLSGQSVGEAMRYLKLTPADVIVFHDELDLAPGKCRVKSGGGHAGHNGLR
                     SIHQHIGPEYQRVRLGIGHPGHKDRVAAYVLSDFARSDRDWLDDLLRGIADGSPFLAA
                     GDGGRFQNAVAARTQPARNTGRTGPDGAGSTKPSPGRTEGNPAPATEIEAAPASMAER
                     LRALTRRFR"
     gene            683..1756
                     /locus_tag="EYO87_01210"
     CDS             683..1756
                     /locus_tag="EYO87_01210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019955437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2332 family protein"
                     /protein_id="HIC64621.1"
                     /translation="MNEAAVRAAFRDQARSCRDLGSPLTARVCDLLADCLRHDSGAVA
                     RRVLDWRGDPSSSADSVPLRLCGGLHALVLRGAAPALARAYASGRVDAALLLSVLTAH
                     EACLLRWLDSPPQTNEVARSAAIIAAARFLAQRCGLPLRALELGASAGLNLNFAHYHL
                     RPAHAQPGAHADRPASDQGAGVTLRPRWDGQVPAGEFRLAEAEGVDLRPVDPVADRLR
                     LQAYCWADQSARLARLRGALDLARVFPPQVAQGDAGDWLIARLAKAAPGRVTFVCHTV
                     AAQYFPEATQGVCAAALQAAAARAGPDAPLAHFAMESDGCGPGAALSLRLWNGAVHGW
                     SLGRADFHGRWVSWHPAPLPSGL"
     gene            1817..2191
                     /locus_tag="EYO87_01215"
     CDS             1817..2191
                     /locus_tag="EYO87_01215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2237 domain-containing protein"
                     /protein_id="HIC64622.1"
                     /translation="MEPSLNVLGGPLETCSDRPKTGFFRNGCCDTGPEDRGSHTICVI
                     VTDEFLAMSKYLGNDLSTPRPEFRFAGLKAGDRWCLCAARFLQAAQEMAAPKVVLDAT
                     HRRALDIVPLELLQAHQAEANG"
     gene            complement(2332..3168)
                     /locus_tag="EYO87_01220"
     CDS             complement(2332..3168)
                     /locus_tag="EYO87_01220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64623.1"
                     /translation="MLSNTMKMMMAGGKIAALTALMGTTALAHDATRIETEDGNTAIV
                     PGAAADAESSVGAVTESPYPLVVQVENDQVVAETLIAQGFTDVRILREGPMMTVTAQR
                     DGQPIELVYSVANGSLVSVNGEELRREPEGASAGDSRNVPAASAGAATDSDADGMDGD
                     DDASDDGMGEDSSTDDDTTGDGMTGDDMTGDGMSDGMTGDGMTDGNSDDGMSGDDGSD
                     AGADSSTDGADTGADGSSDGASAGGDAAGGNSSGGDSSGGDSGGGDSDGGDSDGGDST
                     NG"
     gene            complement(3337..3876)
                     /locus_tag="EYO87_01225"
     CDS             complement(3337..3876)
                     /locus_tag="EYO87_01225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009572071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LuxR family transcriptional regulator"
                     /protein_id="HIC64624.1"
                     /translation="MLKHIPLIVILMLQTVSAAYLVRDMVLSVAGIYFEPLSWQYTEY
                     LDIAAAAGLLGGIGLGARMLVMTLRGRHAAEAKLRRASTAFMELTAQRFCEWNLTPAE
                     RDVALFALKGLSVSEIAALRGTSEGTVKAQTTSVYRKAGVTSRPQLLSLFIEDLFDPD
                     LSPIQPQPRKDSLIGATGR"
     gene            complement(3901..4383)
                     /locus_tag="EYO87_01230"
     CDS             complement(3901..4383)
                     /locus_tag="EYO87_01230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64625.1"
                     /translation="MTATIAGTSAFAQTATQVAPAPTTQTENQPSDISSQVTRQLLSQ
                     GYRNVTARRTLLGKLVITARKDRFDREIVIDPRNGAILRDLLRRPRQFDGPDPSTASD
                     RSRPGIAIGHYGEEGSDGKQPTAEGSDEIGDNGHDNSGDQSGDRSESNSEGGEGSDDG
                     "
     gene            complement(4553..4942)
                     /locus_tag="EYO87_01235"
     CDS             complement(4553..4942)
                     /locus_tag="EYO87_01235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64626.1"
                     /translation="MRTKLSLAATILMLGAAASYAQVNRTVNTQGAVNLHANSAGDTA
                     EDRSGADNDSVEHSSTQGGNAGVDNDSVSHEAQGQDSHDDGKGDAEKADDGKGDAEKA
                     DDGKGDAETADDGPGGSDNHADGEQQD"
     gene            complement(5184..>5586)
                     /locus_tag="EYO87_01240"
     CDS             complement(5184..>5586)
                     /locus_tag="EYO87_01240"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019955439.1"
                     /note="catalyzes the formation of L-tryptophan from
                     L-serine and 1-(indol-3-yl)glycerol 3-phosphate; Derived
                     by automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HIC64627.1"
                     /translation="RMQHCASLTGGRAGVLHGNRTYLLQDEDGQILEGHSISAGLDYP
                     GIGPEHAWLKDVNRAQYVSITDDEALRAFQLCCETEGIIPALEPSHALAHVMKIAPDL
                     PADHLIVMNMCGRGDKDIFTVAKHLGVDIRA"
BASE COUNT          894 a         1829 c         1822 g         1041 t
ORIGIN      
        1 aatatgcagg gaaccgacac aatatcggtt tcatggcggt tgaccgcatc gcgaccgacc
       61 acgacctggg tccgtggagg gcacggtttc agggccagag catcgaggca cggctgggtg
      121 aaaaccgcat tgccctgttg aaaccgggca cgttcatgaa cctgtcgggg caatcggtgg
      181 gcgaggccat gcgctatctg aagctgacgc ctgccgatgt gatcgtgttc catgacgaac
      241 tggatcttgc gccgggcaaa tgccgggtaa agtcgggcgg gggtcacgcc ggccataacg
      301 ggctgcgatc gatccatcag catatcgggc cggaatacca gcgtgtgcgg ctgggcatcg
      361 gccatccggg acacaaggac cgggtggcgg cctatgttct gtcggacttc gccaggtccg
      421 atcgcgactg gctggatgat ctgctgcgcg gtatcgcgga tggatcgccg tttctggccg
      481 caggcgatgg cgggcggttt cagaacgccg tcgcagcccg cacccagcct gcgcggaata
      541 ccggcaggac cgggccggac ggggcaggat ccacaaaacc ctcgcccggc aggaccgaag
      601 gcaatcccgc tccggcgacc gagatcgagg ccgctccggc cagcatggcc gagcgtctgc
      661 gcgcattgac ccggcggttc cgatgaacga agcggcggtt cgggccgcgt ttcgcgatca
      721 ggcgcgatcc tgccgcgatc tgggctcacc gctgactgcg cgcgtctgcg atctgcttgc
      781 ggattgcctg cgccacgatt cgggcgcggt cgcgcggcgc gttctggact ggcgcggcga
      841 tccctcatcc agcgccgatt ccgtgcctct gcggctgtgc ggcgggctgc acgcgctggt
      901 cctgcgcggc gccgccccag ccttggcccg cgcctatgcc tcgggcaggg tggacgcggc
      961 gctgttgctg tcggtcctga ccgcgcatga ggcctgtctt ctgcgctggc tggacagccc
     1021 gccgcagacg aacgaggtcg cgcggtcggc ggcgatcatc gcagcagccc ggttcctcgc
     1081 acaacgatgt ggcttgccgc tgagggcgct ggaactgggc gcctcggccg gtctgaacct
     1141 gaatttcgcg cattaccatc tgcggcccgc gcacgcgcag cccggcgccc atgccgaccg
     1201 gcctgcgtcc gaccagggcg ccggcgtgac cttgcggccg cgatgggacg gacaggttcc
     1261 agccggagag ttccggttgg ccgaggccga gggcgtcgat ctgcggccgg tcgatccggt
     1321 ggcggaccgg ctgcggttgc aggcctattg ctgggcggat cagtcggccc ggctggcccg
     1381 gctgcgcggc gcgctggacc tggcgcgggt ctttccgccg caggtggcgc agggcgatgc
     1441 gggcgactgg ctgattgcgc gtctggccaa ggccgcgccg gggcgcgtga cattcgtctg
     1501 tcacaccgtg gcggcacaat attttccgga agcgacgcaa ggggtttgcg cggccgccct
     1561 gcaggctgcg gcagcgcggg ccggcccgga cgcaccactg gcgcatttcg cgatggaatc
     1621 cgacgggtgc ggccccggcg cggcgctgtc gctgcggctg tggaacggcg ccgtccatgg
     1681 ctggtcgctg gggcgcgcgg attttcacgg ccgatgggtg tcatggcacc ctgcccccct
     1741 gccatcgggc ttgtgaacgg cgggggattg gccgacaggc gcggctggtt tatcctgttt
     1801 ccaggaggag acgaggatgg agccatccct gaacgttctc ggcgggccat tggagacgtg
     1861 ttcggaccgg ccgaagaccg gcttctttcg caacggatgt tgcgataccg gacctgagga
     1921 tcgcggcagc catacgatct gcgtgatcgt gaccgacgaa tttctggcca tgtcgaaata
     1981 tctgggcaac gatctgtcca cgccccgacc ggaattccgc ttcgccgggc tgaaggctgg
     2041 cgatcgctgg tgcctgtgcg ccgcgcgctt tctgcaggcg gcgcaggaaa tggccgcgcc
     2101 caaggtggtc ctggatgcga cgcatcgacg ggcgctggat atcgttccgc tggaattgct
     2161 gcaggcgcat caggcggaag cgaatggatg acaggccccg gcgcaggggg ccacctgcgc
     2221 ccgacatgaa tcctttgcgt gcgaagacga cgttttccag gccggtccgt cgggcgaccg
     2281 gaaaaggggc cggacgaatc cggcccccgg taattcaccg ctgatcaagc gttacccatt
     2341 ggtgctgtcg ccaccatcgg aatctccgcc atccgaatca ccaccgccgg aatccccacc
     2401 gctggaatct ccgccgctgg aattgccacc cgcagcatcg cccccggcag acgcgccgtc
     2461 cgacgatccg tcggcccctg tatccgcgcc atccgtcgag ctgtccgcgc ccgcgtccga
     2521 gccgtcgtca ccggacatgc catcatcgga gttgccgtcg gtcatgccgt cgcccgtcat
     2581 gccgtcgctc atgccatcgc ccgtcatgtc gtcgccggtc atgccatcgc ccgtggtatc
     2641 gtcatcggtg ctgctgtcct cgcccatgcc gtcgtcggac gcatcgtcat cgccatccat
     2701 gccgtcagca tcggaatcgg tcgcagcacc cgcggaggct gccggaacat tccttgaatc
     2761 gccggccgag gctccttcgg gttcgcggcg cagctcttcg ccattcaccg aaaccaggct
     2821 tccattggcc acgctgtaga ccagctcgat cggctgtcca tcgcgctgcg cggtgacggt
     2881 catcatcggt ccttcgcgca ggatgcggac atcggtaaag ccctgcgcaa tcagcgtctc
     2941 ggcaacgacc tgatcgtttt cgacctggac gaccagcgga taaggcgatt ccgtcaccgc
     3001 tccgaccgag gattccgcat ctgcggcggc accgggaaca atggccgtgt tgccatcttc
     3061 ggtctcgatt ctggtcgcgt catgggccag ggcggtggtg cccatcaggg ccgtcagggc
     3121 agcgatcttg ccgcccgcca tcatcatctt catggtattg ctcagcatgt ctaacctccg
     3181 tcatgcggta tggaggccaa acgcgcggcg gaagccatgc ggttcatctg ccgctgcgtc
     3241 atgcgaaacg aaagcggttt tccgccgacc ggcaccgagg ccctttgaag gggaccgcag
     3301 gggcgagacg acgccggtga tcccttcgcc agcggatcat cgtcccgtgg cgccgatcag
     3361 ggaatccttg cgtggctgcg gctggatcgg ggaaagatca ggatcgaaca gatcctcgat
     3421 aaacaggctg agcaattgcg gcctgctggt cacgccggcc ttgcggtaga ccgaggtggt
     3481 ctgagccttg accgtgcctt ccgatgtgcc gcgcagggcg gcgatctccg acacggacag
     3541 tcctttcagg gcgaaaagcg ccacgtcccg ttcagccggg gtcagattcc attcgcagaa
     3601 ccgctgcgca gtcagttcca tgaaggcggt cgaggcacgg cgaagcttgg cctcggccgc
     3661 atgccggccg cgcagggtca tcaccagcat ccgcgcgccc agcccgatcc caccaagcag
     3721 tcccgccgcg gcggcgatgt ccagatattc ggtatactgc caggaaagag gttcgaaata
     3781 gatccccgcc accgacagca ccatgtcgcg caccagatag gcggccgaga cagtctgcaa
     3841 catgagaatg acgatcagag gaatgtgctt cagcatcggc gaacccggtc gaccgcggac
     3901 ttatccatcg tccgagccct caccgccttc ggaattgctt tccgaccgat cgcctgattg
     3961 gtcaccggag ttgtcgtgcc cgttgtcgcc gatctcgtca cttccctctg cggtgggttg
     4021 ctttccatcg gaaccctctt cgccgtagtg accgatcgct atgcccggcc gcgagcgatc
     4081 gcttgccgtc gacggatccg ggccgtcgaa ctggcggggg cgccgcaaca ggtcgcgcag
     4141 aatcgcaccg tttcgcgggt cgatcacgat ttcccggtcg aagcgatctt ttcttgccgt
     4201 aatgaccagc ttgcccagaa gtgtccggcg tgccgtcacg ttgcgatagc cctgcgacag
     4261 aagttgcctc gtcacctgag acgagatgtc cgaaggttga ttttccgtct gggtcgtggg
     4321 cgcaggcgcc acctgcgtcg cggtttgtgc gaatgcggat gttccggcaa tcgtcgcggt
     4381 caccagcgcg aaaaagagtc caagacgggc gtctgatatc gtcacggttc tttccggatc
     4441 cagacaggag gacgggcgcg atcgcgcccg tcacctgggg tttgcaagca cccgatttgc
     4501 gggattccgc gctcggcggg ttttcggatt atcgggcgaa ggccggcggc aatcaatcct
     4561 gttgctcacc atcggcatgg ttgtcggagc cacccgggcc atcatccgcc gtctcggcat
     4621 cgcccttgcc atcatccgcc ttctcggcat cgcccttgcc gtcatccgcc ttctcggcat
     4681 cgcccttgcc gtcgtcgtgg ctgtcctgac cctgagcttc gtggctgaca gaatcattgt
     4741 cgacgcctgc attgcctccc tgggtgctgg aatgctcgac cgaatcgttg tccgcgccgg
     4801 acctgtcctc ggccgtgtcg ccggccgagt tggcgtgaag gttgaccgcg ccctgcgtgt
     4861 tgacggtcct gttcacctgg gcataggaag cagccgcccc cagcatcagg attgtcgctg
     4921 caaggctcaa tttcgtgcgc atgtcgtgtt ccttttgtgc ttggcaccgg atcgtcccgg
     4981 cgtcttgcaa acctagcaat ccaaggtggc cgcagcccat tggaccacgg ggccaggatc
     5041 ggcgcgataa acgaaagtgc catgctgaaa acacgaaaga aaaacagacc tgggaggtcg
     5101 ccccggccga ttgcggagag cctgttgcgc ctggccccct catgcggtgc cccggccatg
     5161 gcgcgattcg cggatgcgtg ggttcaggcc cggatatcga cacccagatg cttggcaacg
     5221 gtgaagatgt ccttgtcgcc gcgaccgcac atgttcatca cgatcagatg atccgccggc
     5281 agatcgggcg cgatcttcat cacatgggcc aaagcgtggc tgggttcgag cgccgggatg
     5341 atgccctcgg tctcgcagca caattggaac gctctcaacg cctcgtcgtc ggtgatgctg
     5401 acatattgcg cccggttcac gtccttcagc caggcatgtt ccggcccgat gccgggataa
     5461 tccagcccgg cgctgatcga atggccttcc agaatctgcc cgtcctcgtc ctgcaacaga
     5521 taggtgcggt tgccatgcag cacccccgcg cgcccgccgg tcaggctggc gcaatgctgc
     5581 atccgg
//
LOCUS       DTVW01000092            3189 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1132634, whole
            genome shotgun sequence.
ACCESSION   DTVW01000092 DTVW01000000
VERSION     DTVW01000092.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3189)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3189)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3189
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1132634"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..996
                     /locus_tag="EYO87_01245"
     CDS             <1..996
                     /locus_tag="EYO87_01245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018185194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HIC64628.1"
                     /translation="WNYPLALAARKLGPALVAGNTFVLLSHEITPLAGLNLAALADQA
                     GLPAGVFNVITGRGASAGHALVESPLSDLVTMTGSTRAGREIFRSAADRLKVLSLELG
                     GKAPFIVMEDADLDHAVDAAVAARFANCGQVCTCNERMYLHRDIADEFMRRFVARTRA
                     LRIGDPMGDPDLGPKVSRVEIDKIENLVEAAIAKGAEPILRGGRLTGGEYAKGHWIAP
                     TVLEVADNTNPIMQSELFGPVVPFLRVDGFEDAVAKANDSEYGLSAYLFTRDIGRMMR
                     VSRELNFAEIYFNRSNGEQVQAYHSGWNQSGIGGEDGKYGFDNYLKKQTMYVNWS"
     gene            1015..2112
                     /locus_tag="EYO87_01250"
     CDS             1015..2112
                     /locus_tag="EYO87_01250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007669719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mandelate racemase/muconate lactonizing enzyme
                     family protein"
                     /protein_id="HIC64629.1"
                     /translation="MAKIETVTVRHFEVPLAEVLVDARHGAHTHFELVTVTITDADGA
                     TGTGYTYTGGKGGRAIVAMLEHDLAPFLNGRQAAEPEALYDAMQWHVHYVARGGIASF
                     AISAVDIALWDLKGKAAGVPLWRLAGGAGNTCRAYRGGIDLNFPLPKLLDTMSGYLRT
                     GFEAVKIKVGQPRLDEDVARVRAVRALIGPDVTFMVDANYSMDVDRAIAAARAFAPHD
                     ITWFEEPIIPDDYAGYARIAKATGMPLAMGENLHTEHEFGYALAQSQLSYIQPDASNC
                     GGVTGWLRVARMAAAAGLPVCSHGMQELHVSLVSAQENAGWIEVHSFPIDDYTTRPLV
                     LKDARAVAPDTPGTGVEFDWDKLKRSCARAA"
     gene            2124..3155
                     /locus_tag="EYO87_01255"
     CDS             2124..3155
                     /locus_tag="EYO87_01255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018690322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Zn-dependent alcohol dehydrogenase"
                     /protein_id="HIC64630.1"
                     /translation="MKIDAAYYTGNGRFELREIEDMPPGPGQVQVETAFCGICGTDLH
                     VYLGHMEARIGNNRVIGHEMSGRVAAVGEGVEGFEPGDKVAVRPLDHCGACPACKAGH
                     IHICHNLKFLGLDTDGAFQNRWTVPAHVLHKLPDAMSLDHAALVEPLAVAVHDVRRAR
                     VSVGEDVLVIGGGPIGMLVALVARRAGARVTISEVNANRLALAEKMGFATANPKEADV
                     ADRIIDETGGKGADVIFEVSGTQPGVDLMTAAAASRGRICMVAIHAQKPQIDLFRFFW
                     REIELLGARTYEISDFDAAIALLDEGFGAEALITDIRPLTQLQDAFKALTENPNSMKT
                     LIRVGKEAA"
BASE COUNT          582 a          983 c         1074 g          550 t
ORIGIN      
        1 tggaattacc cgctggcgct ggcagcgcgc aagctgggcc cggcgctggt ggccgggaat
       61 acctttgtcc tgctcagcca cgagatcacg ccccttgcgg ggttgaacct ggccgcactg
      121 gccgatcagg ccggtctgcc ggccggggtc ttcaacgtca tcaccggtcg cggcgcgtca
      181 gccggacacg cgctggtgga aagcccgctg tcggacctgg tgacgatgac cggcagcacg
      241 cgcgcgggac gcgaaatatt ccgctcggca gccgaccggc tgaaggtcct cagcctcgag
      301 cttggcggca aggccccctt catcgtgatg gaggatgccg atctcgacca tgccgttgac
      361 gccgcggttg ccgcacgctt tgccaattgc ggccaggtct gcacctgcaa cgagagaatg
      421 tacctgcatc gcgacatcgc cgatgaattc atgcgccgct tcgtcgcgcg caccagggcg
      481 ctgcgtatcg gcgacccgat gggcgacccg gatctgggac cgaaagtcag ccgcgtcgag
      541 atcgacaaga tcgagaatct ggtcgaggcc gcaatcgcga agggcgccga accgatcttg
      601 cgcggcggcc gtctgaccgg gggcgaatac gcgaaaggtc actggatcgc gccgacggtt
      661 ctggaagtcg ccgataatac caaccccatc atgcagtccg agctgttcgg cccggtcgtt
      721 ccattcctgc gcgtggacgg gttcgaggat gccgtcgcca aggccaatga cagcgaatac
      781 gggctgtcgg cctatctttt cacgcgcgac atcggccgga tgatgcgcgt cagccgcgag
      841 ctgaactttg ccgaaatcta cttcaaccgc agcaatggcg aacaggtcca ggcctatcat
      901 tcaggctgga accagtccgg gatcggcggc gaggacggca agtacgggtt cgacaattat
      961 ctcaagaaac agaccatgta cgtcaactgg tcctgagcgg gaaggagcgc tgtcatggcc
     1021 aagatcgaga ctgtgaccgt caggcatttc gaggtgccgc tggccgaggt tctggtcgat
     1081 gccaggcacg gcgcgcatac ccatttcgaa ctggtgaccg tgacgatcac cgatgcggac
     1141 ggcgcgaccg ggacgggcta tacctatacc gggggcaagg gtgggcgcgc gatcgtggcc
     1201 atgctggaac atgatctggc gcccttcctg aacggccggc aggcggccga gccagaggcg
     1261 ctttacgatg cgatgcagtg gcacgtccac tatgtcgcgc ggggcggcat cgcctcgttc
     1321 gcgatctcgg cggtggacat cgccctgtgg gatctgaagg gcaaggccgc gggtgtcccg
     1381 ctgtggcggc tggccggtgg agcagggaac acctgtcgcg cctatcgcgg cgggatcgac
     1441 ctgaatttcc cgctgccaaa gctgctggac acgatgtcgg gctatctgcg caccgggttc
     1501 gaagcggtca agatcaaggt cggccagccg aggctggacg aagatgtcgc gcgggtgcgc
     1561 gcggtgcgcg cgttgatcgg accggatgtc accttcatgg tcgatgcgaa ttactcgatg
     1621 gacgtggacc gcgcgatcgc cgccgcgcgc gcctttgcgc cccatgacat cacctggttc
     1681 gaagaaccga tcattcccga cgactacgcg ggctatgccc ggatcgccaa ggcaaccgga
     1741 atgcccctgg ccatgggtga aaacctgcac accgaacacg aattcggata tgcgctggcg
     1801 cagtcgcaac tgtcctatat ccagcccgat gcgtccaatt gcggcggcgt gacgggatgg
     1861 ctgagggtcg cgcggatggc ggcggcggcc ggattgccgg tttgcagcca cggcatgcag
     1921 gagctgcatg tcagcctggt ctcggcgcag gaaaacgcgg gatggatcga ggtgcattcc
     1981 ttccccatcg acgactacac cacgcgcccc ctggtgttga aggacgcacg ggcggtggcg
     2041 cccgacacgc cgggaacggg cgtcgaattc gactgggaca agctgaaacg aagctgcgcg
     2101 cgcgcggcct gagggagaat atgatgaaga tcgacgcagc ctattacacg ggcaatggac
     2161 gtttcgaact gcgcgaaatc gaggacatgc cacccggccc gggccaggtc caggtcgaga
     2221 cggcgttttg cggcatctgc ggcaccgact tgcatgtcta tctgggccac atggaagcgc
     2281 ggatcggcaa taaccgggtc atcggccacg agatgtcggg tcgcgtcgcg gccgtgggcg
     2341 aaggggtcga gggtttcgag ccgggcgaca aggtcgcggt ccgaccgctt gatcattgcg
     2401 gcgcctgtcc ggcctgcaag gcaggtcata tccacatctg ccacaacctc aaattcctgg
     2461 gtctggatac cgacggcgcg ttccagaacc gctggaccgt tcctgcgcat gtgctgcaca
     2521 agctgcctga cgcgatgtcg ctggatcacg ccgcgctggt ggaaccgctg gcggtcgcgg
     2581 tccatgacgt gcgccgcgcc cgcgtcagcg tcggcgagga cgtgctggtg atcggcggcg
     2641 gcccgatcgg gatgctggtg gccctggtcg cccgccgggc gggcgctcgg gtcacgatct
     2701 ccgaggtgaa tgcgaatcgt cttgcgttgg ccgaaaagat gggctttgcc accgcgaatc
     2761 caaaggaagc cgacgttgcg gaccgcatca tcgacgaaac cggcggcaag ggtgccgacg
     2821 tgatcttcga ggtttcgggc acgcagccgg gcgtcgatct gatgacggcc gccgcggcca
     2881 gtcgcgggcg gatctgcatg gtcgccatcc atgcgcaaaa gccgcagatc gatctgttcc
     2941 gctttttctg gcgcgaaatc gagctgctgg gtgcccgaac ctacgaaatc tcggatttcg
     3001 acgcggccat cgcgctgctg gacgaaggtt tcggcgccga ggccctgatc accgacatcc
     3061 gcccgctgac ccaattgcag gacgcgttca aggccctgac cgagaatccg aactcgatga
     3121 agacgcttat ccgcgtgggc aaggaggccg cctgatgttc gatcccacct ctttcagcct
     3181 tgccggcaa
//
LOCUS       DTVW01000093            2241 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1134161, whole
            genome shotgun sequence.
ACCESSION   DTVW01000093 DTVW01000000
VERSION     DTVW01000093.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2241)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2241)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2241
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1134161"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1754)
                     /locus_tag="EYO87_01260"
     CDS             complement(<1..1754)
                     /locus_tag="EYO87_01260"
                     /EC_number="1.11.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003799113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catalase"
                     /protein_id="HIC64631.1"
                     /translation="MPDHKSGQESAVTDTSNKSGEAGELHQRGGKPLTTNQGVALSDN
                     QNSLKAGARGPSLLEDFILREKIFHFDHERIPERIVHARGSGAHGYFECTDPIPELTR
                     AQFLSKKGRTPVFTRFSTVAGGAGSVDTPRDVRGFAVKFYTEEGNFDLVGNNIPVFFI
                     QDAIKFPDLIHAVKMEADRGYPQAATAHDTFWDFVSLMPESLHMIMWAMSDRAIPRSL
                     RMIEGFGIHTFRLVNDEGKSTFVKFHWKPRLGLQSQVWNEAVKTAGANPDYHRQDLWE
                     AIERGDHPEWDLGIQVFDADWAARQPYDVLDATKLVPEEDIPVRVVGRMVLDRNPDNF
                     FAETEQAAFCPSHVVPGVDFTDDPLLQGRLFSYLDTQKSRLGTANFHQLPINAPKCPM
                     QNFQRDGMMQMAVPKGRANYEPNSLAEAGEDGGPRAVDRGFATAPAMTDLGNSPDAKL
                     RVRPELFGDHYSQARLFYRSQTQVEQCHIAEAITFELSNVGLDHVRSRILGHLRVIDE
                     DLAGAVARGLAEDLPEAATPQRAPIDMPPSDALSILKRSKPSLAGRKVGIVIGAGGDS
                     ARAKAIREAVEAAGGVAV"
BASE COUNT          419 a          719 c          706 g          397 t
ORIGIN      
        1 atcaccgcca caccgccggc cgcttcgacc gcttcacgaa tggccttggc gcgcgcggaa
       61 tcgcccccgg cgccgatgac aatcccgacc ttgcggcccg cgaggctggg cttcgaccgc
      121 ttcaggatcg acagcgcgtc cgagggcggc atgtcgatcg gggcccgctg cggcgtcgcg
      181 gcctcgggca gatcttcggc caggccgcgg gccacggcgc cggcgagatc ttcgtcgatc
      241 acccgcagat gacccagaat ccggctgcgg acatgatcca gtcccacgtt cgacaactcg
      301 aaggtgatcg cctcggcgat gtggcactgt tcgacctggg tctggctgcg atagaacaac
      361 cgcgcctggc tgtagtgatc gccgaacaat tcgggcctga cgcgcagctt ggcatcgggc
      421 gagttgccca gatcggtcat cgcaggggcg gtggcaaaac cccgatccac ggcgcgcgga
      481 ccgccgtcct cgccggcttc ggcaagactg ttgggttcat aattggcccg tcccttgggc
      541 accgccatct gcatcatccc gtcacgctgg aaattctgca tcgggcattt cggggcattg
      601 atcggcaatt gatggaaatt ggcggttccc agccgcgatt tctgggtgtc cagatagctg
      661 aacagccgcc cctgcaacag cggatcgtcg gtaaagtcga cgcccggcac cacatgcgag
      721 ggacagaagg ccgcctgctc ggtctcggca aagaagttgt cgggattgcg atccagcacc
      781 atccggccga cgacgcgcac cgggatatcc tcttccggaa caagcttggt cgcgtccagg
      841 acgtcatatg gctgccgggc ggcccaatcc gcgtcaaaga cctggatgcc cagatcccat
      901 tcgggatgat cgccgcgttc gatggcctcc cacagatcct gtcggtggta gtccgggttg
      961 gcgcccgctg tcttgaccgc ctcgttccag acctggctct gaagccccag ccgtggcttc
     1021 cagtgaaact tgacaaaggt ggacttgccc tcgtcattga ccagacggaa ggtgtggatc
     1081 ccgaaaccct cgatcatgcg gagactgcgc ggaatcgccc ggtcggacat cgcccacatg
     1141 atcatgtgca gcgattcggg catcagcgag acgaaatccc agaaagtgtc atgggccgtg
     1201 gcggcctggg gatagccccg atcggcctcc atcttcacgg cgtggatcag atcgggaaac
     1261 ttgatcgcgt cctggatgaa gaacacgggg atattgttgc cgaccagatc gaaattgccc
     1321 tcttcggtat agaacttgac cgcaaaaccc ctgacatcgc ggggggtgtc gacgctgccc
     1381 gccccgcccg cgacggtgga aaagcgggta aagaccggcg tgcggccctt cttcgacagg
     1441 aattgggcgc gtgtcagttc aggaatggga tcggtgcatt cgaaatagcc atgcgcaccc
     1501 gacccgcggg catgcacgat ccgttcgggg atacgctcgt gatcgaagtg aaagatcttc
     1561 tcgcgcagga tgaagtcttc cagaagggaa ggcccgcgcg cgcccgcctt caggctgttc
     1621 tggttgtcgc tgagcgcgac gccctgattg gtggtcaagg gcttgccgcc acgctgatgc
     1681 agctcgcccg cctcaccgct cttgttgctg gtgtcggtca cggcactctc ctgtcctgat
     1741 ttgtgatccg gcatccgaaa ggacgcccgg cgaacaacgc aggtgatggc tgaccgttcc
     1801 cgcgaaagac gaaatcccgg atcagcggcg ccgcccttgt ccggcgccga cgcgcgccgt
     1861 gtccgtgatc gggcgatgcg agaccgcccg caatggtcgg tggcgacgga acgaagcgcg
     1921 cgcggagggc gggccacgac cgcccttggc atcgtcggcg cgcgtcctgg aaatggttga
     1981 ctgatgcaaa aaatgcgagc aacgtgcctg cggggccgac tctcgctccg gctaaagcct
     2041 ttcgacaccg ccgttttttc gaccggacgg cgcatggcgg aaaactgccc ggaacatgcg
     2101 accccgccga acggaagggg aggaatgtcg tgacggacat aaccagtacc cgggacatgc
     2161 caccctccgg ccgacatcca agcgacctgc tggaaccgat ccatcattac agcgaccgtg
     2221 ccgcgcgaac ctggctttac a
//
LOCUS       DTVW01000094            4956 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1135720, whole
            genome shotgun sequence.
ACCESSION   DTVW01000094 DTVW01000000
VERSION     DTVW01000094.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 4956)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4956)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4956
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1135720"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..202)
                     /locus_tag="EYO87_01265"
     CDS             complement(<1..202)
                     /locus_tag="EYO87_01265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011749295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster repair di-iron protein"
                     /protein_id="HIC64632.1"
                     /translation="MTTTINPLFTKSVGEIAAQLPGAPGVFRQFDISFCCHGDSSLAE
                     AAKRNNHELATVIAALDALDPTA"
     gene            complement(286..1284)
                     /locus_tag="EYO87_01270"
     CDS             complement(286..1284)
                     /locus_tag="EYO87_01270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015501197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64633.1"
                     /translation="MSETPHRIRIRVQPSRRDPETLRFLLDTPVQADAGIVRFDGMAE
                     DAPLSAALFAVAGVRQVAVDGPVIHIRKRATARWDAMKTPIAAAIRAALLGTGAPLGN
                     AGESGQDDADARLKEAVRALLASQINPSIAGHGGHIDVETVAEGSVYLRMSGGCQGCA
                     ASQLTLRGGVERKLRAALPDLRDIVDVTDHEAGAKPFYGGAPGEIHNMRSPIAQEPAP
                     LDADTPLAERLRRYLEALPSSDPTVSYGTLTRAFGFWRPGSVRKVTQALEVTMRDDAG
                     AGQPFIAARAIGRASDGLPGKGFFDLARDLSRGPRDDETERAFHARELQRLEQATN"
     gene            complement(1277..2458)
                     /locus_tag="EYO87_01275"
     CDS             complement(1277..2458)
                     /locus_tag="EYO87_01275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006034365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF971 domain-containing protein"
                     /protein_id="HIC64634.1"
                     /translation="MTAGATSPNAAASPRRMIAISSGKGGVGKSTVTVNLGVAMARAG
                     LRVGIVDADIYGPSIPGMLGIPGNAPPAMAPDQRVIPSEAHGVKVISMAMMTDDDRPA
                     ILRGPMVTKYLRMFVSQVAWGELDVLLLDLPPGTGDIQLTLAQSFPLTGAVVVSTPQD
                     VSLKIARRGLRMMEQVKVPIIGVIENMSGFTCPSCGDVTHIFHQGGGEAIAAELGVPF
                     LGKVPLDPAIVDSGDDGRPLVLTRPDSPAAQAYAQIAAALVDGHAGTDGVALPFDWNM
                     ASDVGRPVPVPATGSAHDIPCALDHTAAGLTILWPDGDSRTIAIRDLRIACRCAACRN
                     EMTGDRLLDPETVPLAVSATRIWSIGNYALGVAFSDGHSSGIYSFSALRDMQGAELED
                     V"
     gene            complement(2455..2904)
                     /locus_tag="EYO87_01280"
     CDS             complement(2455..2904)
                     /locus_tag="EYO87_01280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019198790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HIC64635.1"
                     /translation="MRLTMMSDYALRVLLFAAAHPDRLVTIDETQEVYDVSRGHLMKI
                     IGVLARAGILRSQRGRSGGFTLGLPPEQIRLGDVFRLTEPDFEMVECFAPTNTCAITP
                     FCRFPAIATEALSAFMAVMDRHTLADLIIQPQHFGAIVEALEERPSS"
     gene            3061..3321
                     /locus_tag="EYO87_01285"
     CDS             3061..3321
                     /locus_tag="EYO87_01285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014067777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2249 domain-containing protein"
                     /protein_id="HIC64636.1"
                     /translation="MPESATIPTANPTIVDLRPMIPPERHATVFAALEGLAPGATFVL
                     INDHAPIPLLHQIEQNWPDQFETEFLADGPEVWQVAITRNSA"
     gene            3337..3690
                     /locus_tag="EYO87_01290"
     CDS             3337..3690
                     /locus_tag="EYO87_01290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64637.1"
                     /translation="MTMRLEPTAEGFQIGAADLGALLGMAPQDIQRLMRDGQITSLSE
                     KGQDQDEGRYRITFRHRSTRVRLTVNAQGEVLLRTRARVTPHPGETTGASIKTQETAT
                     ASKNAGITPSVKASK"
     gene            3762..4112
                     /locus_tag="EYO87_01295"
     CDS             3762..4112
                     /locus_tag="EYO87_01295"
                     /inference="COORDINATES: protein motif:HMM:PF01814.21"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64638.1"
                     /translation="MVEDLHVGDKGNPEGLATVLRRLIDELAVQKSTAEQVLFPAARK
                     ATTPEIEAATEVLRAKHAACDRDIQRIRDITNEFTLPEGACESWVTLYTGLSDFISDI
                     QTHLSLEKEILGTH"
     gene            4206..4673
                     /locus_tag="EYO87_01300"
     CDS             4206..4673
                     /locus_tag="EYO87_01300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015277563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64639.1"
                     /translation="MFKITLPADRAEIDMVAVAEAFGISVKGLDDAIHIGTVSRWFEL
                     GEGDQDNKPHWIFASAKLGLKVDVDEHGFVHSVNEYRTVRTDLQQNRGQYGNAGRSKT
                     LPTKAVDPNIEEAVDIARRTRLDALLDEALDESFPASDPIAISFYSPRGTAQL"
     gene            4737..>4956
                     /locus_tag="EYO87_01305"
     CDS             4737..>4956
                     /locus_tag="EYO87_01305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64640.1"
                     /translation="MVEHSDEVDEIPRLKWPRRFPVPRDFGVAKGSRISEGKSWPAPD
                     GATRIATLRIYRFSPDGEEGPRMDTFRVD"
BASE COUNT         1011 a         1530 c         1494 g          921 t
ORIGIN      
        1 ccgccgttgg atcaagcgca tccagcgccg cgatcaccgt cgcaagttcg tgattgttgc
       61 gcttggctgc ttctgccagc gaagaatccc catgacagca aaagctgatg tcaaactgtc
      121 ggaaaacgcc gggggcgccg ggaagttgtg cggcgatttc accgacgctc ttggtgaaga
      181 gagggttgat tgtcgtggtc ataaaagtct ccatggattg acttggttcg ttggttgtcg
      241 tggtgttgtc cggccgggcc gccgacgcgg cgcatgtcca tcaattcagt tggttgcctg
      301 ctccagtcgc tggagttcgc gcgcatggaa tgcgcgctcg gtttcgtcgt cacgcgggcc
      361 acgcgacagg tcgcgggcaa gatcaaagaa ccctttgccg ggcaggccgt cgctggcccg
      421 gccgatggcg cgggcggcaa tgaacggctg gcccgcgcct gcgtcatccc gcatcgtaac
      481 ttccagcgcc tgtgtcactt tgcgcaccga accggggcgc caaaacccga atgcgcgcgt
      541 cagtgtgcca tagctgaccg ttggatcgga ggacggtagc gcctccagat accggcgaag
      601 ccgttcggca agcggggtgt ccgcgtctag cggcgcgggt tcctgggcga ttggggatcg
      661 catattgtgg atttcaccag gggcaccgcc atagaacggt ttggcgcctg cttcgtgatc
      721 cgtcacatcg acgatgtccc gcagatcggg cagagccgcg cgcagcttgc gctcgacgcc
      781 gccccgaagc gtcagttggg acgcggcaca cccctgacag ccaccggaca tgcgcagata
      841 tacggatccc tccgctaccg tctcgacatc tatatggccg ccatgtccgg cgatggacgg
      901 gttgatctga ctggcaagca gagcccgcac cgcttccttc agtcgggcat ctgcatcgtc
      961 ttgcccgctc tcgcctgcat tacccagcgg ggccccggtg ccgagcaggg cagcgcggat
     1021 tgccgccgcg attggcgttt tcatggcgtc ccagcgggcc gtggcgcgtt tgcggatatg
     1081 aatgaccggg ccgtcgaccg ccacctgtcg aaccccggcc acggcgaaca gggcggccga
     1141 cagtggcgca tcttcggcca tgccatcaaa gcgcacgatc ccggcatctg cctgaaccgg
     1201 cgtatcgagc agaaagcgca gggtttcggg gtcgcggcgc gacggctgca cccgaatccg
     1261 tatccgatgt ggcgtttcag acatcctcca actcggcccc ctgcatgtcg cgcagcgcgc
     1321 tgaagctgta gatgccgctg ctgtgaccgt cgctgaatgc gacaccaagc gcgtagtttc
     1381 caatgctcca gatgcgggtt gcactgaccg caagcgggac ggtttcggga tccagcagcc
     1441 ggtcgccggt catctcgttg cggcaggcgg cgcaacggca ggcgatacgc aggtcgcgta
     1501 tggcaatcgt ccggctgtcg ccgtccggcc aaaggatcgt caggcccgcc gcagtgtggt
     1561 ctagcgcgca gggaatgtca tgtgcactgc ccgtggcagg aaccggcacg ggcctgccaa
     1621 catcactcgc catgttccag tcgaagggca aggcaacacc gtcggttccc gcatggccat
     1681 ccaccaacgc agcggcgatt tgggcatagg cctgcgccgc cgggctgtcg ggccgggtca
     1741 ggaccagcgg gcgaccgtca tcgccggaat cgacaatcgc ggggtccagc ggaactttgc
     1801 caaggaacgg gacgcccagc tcggccgcga tcgcctcgcc gccgccttga tggaagatgt
     1861 gggtgacatc gccacaggac gggcaggtaa agccgctcat gttctcgatc acgccgatga
     1921 tcggcacctt gacctgctcc atcatccgca gaccacgccg cgcgatcttc aggctgacat
     1981 cctgcggcgt gctgacgact acagcaccgg tcagagggaa ggactgggcc agcgtcaact
     2041 gtatgtcgcc cgtccccggc ggcagatcca gcagcagcac gtcaagttcg ccccatgcca
     2101 cctgtgacac gaacatgcgc aggtacttgg tgaccatcgg gccgcgcagt atcgccgggc
     2161 ggtcatcgtc ggtcatcatc gccatcgaga tgaccttgac cccatgagcc tcggacggga
     2221 tcactctttg atcaggggcc attgccggcg gtgcattgcc cggaataccc agcatgccag
     2281 gaatcgaagg gccgtagata tcggcgtcga caatgccgac gcgcagtccg gcccgggcca
     2341 tggcaacgcc gagattgacg gtgacggtgg attttcccac accacccttg ccgctgctga
     2401 tcgcgatcat gcggcgcgga ctggcagccg cgttcggtga cgttgccccg gcggtcatga
     2461 tgatggtctt tcttccagtg cttcaacaat cgcgccgaag tgctgcggct ggatgatcag
     2521 atcggccagc gtgtgccgat ccatgaccgc cataaaggcg ctcagcgcct cggtggcaat
     2581 cgccggaaag cggcagaatg gcgtgatggc gcaggtattt gtgggcgcaa aacactcgac
     2641 catctcgaaa tccggttcgg tcaggcggaa cacatcgccc agacggatct gctccggtgg
     2701 caggcccagc gtgaacccgc cactgcgacc ccgctgcgag cgcaggatgc ctgcgcgggc
     2761 cagcacaccg atgatcttca tcaggtgccc acgcgaaaca tcatagacct cctgggtttc
     2821 atcgatcgtc accaggcggt cagggtgcgc ggccgcaaaa agaagcacac gcagcgcgta
     2881 gtccgacatc atcgtcagcc tcatgttcgt tctccgatct gtgtgtcggc tttggcgccg
     2941 gtttgtcgcg caactgccgc tgccacctcg tgcgccacac ctccatacgg tactaaaaga
     3001 atattgacaa tatttctttt aatgcgtaac cataaaggtg ttgaagagag ggaaatacca
     3061 atgcctgaaa gcgccaccat ccccaccgct aacccaacca tcgtcgacct gcgccccatg
     3121 attccgcccg aacgccatgc gacggtcttc gcggcgctcg aagggctcgc ccccggcgca
     3181 acctttgtgt tgatcaacga ccatgcgccc atcccgcttc ttcatcagat cgaacagaac
     3241 tggcctgatc agtttgaaac cgagttcctc gcggatgggc ccgaagtctg gcaagtcgca
     3301 atcacccgca acagcgcctg acgaaaagaa ggagacatga caatgcgcct ggagccgaca
     3361 gcagaaggat ttcagattgg cgcggccgac cttggcgcgt tactgggtat ggcaccacag
     3421 gacatccagc gcctgatgcg cgacggccag atcaccagct tgagtgagaa agggcaggat
     3481 caggatgaag ggcgttaccg gatcacgttt cgccaccgct cgacgcgcgt gcgcctgact
     3541 gtgaatgcac agggcgaggt tctgctgcgc acccgggcgc gtgtcacgcc ccacccgggc
     3601 gaaacaactg gtgccagcat caaaacccag gaaacagcga cggccagtaa aaacgccggt
     3661 atcacaccaa gcgtcaaggc ctcaaagtga cacggtcttt ggaaactcct gccccggcgc
     3721 actaccctac tccagtatcg caactggtaa aattggcgga aatggttgag gatcttcacg
     3781 tcggggacaa gggaaacccg gaaggtttgg ccacagtcct tcgccgcctg atcgatgagc
     3841 tcgccgttca gaaaagcaca gcggagcagg ttctttttcc cgccgctcgc aaggcgacga
     3901 cgcccgaaat cgaggcagct accgaagttc tacgcgcaaa acacgccgct tgtgatcgcg
     3961 atatccaacg tatccgtgac atcaccaacg agttcacgct gccggaaggc gcctgcgaaa
     4021 gctgggtcac gctttatacc ggcctttcag acttcatcag cgatattcag acccacctgt
     4081 cccttgagaa ggagatactc ggcacgcact gaaccaacgg gcggcaaatc ggccgcgttc
     4141 aaggtctgat agcgcatctc tacggatcag aatgtatcgc ggataacccg cttttggagg
     4201 agaccatgtt caagattaca cttcccgccg acagagcgga gattgatatg gtggccgttg
     4261 ccgaagcttt tggcatcagc gtcaagggct tggacgacgc cattcatatc ggcacggtca
     4321 gccgatggtt cgaactgggc gaaggcgacc aggacaacaa gccacactgg atttttgcct
     4381 ctgcgaaact tgggttgaaa gttgatgtcg atgaacatgg gttcgttcat tccgtcaatg
     4441 aatacagaac cgtgcgcacc gacctgcaac agaacagggg gcaatacggc aatgcagggc
     4501 gcagcaagac actaccgacc aaagcggtgg accctaatat cgaggaggcc gtagatatcg
     4561 cgcgccgcac ccgccttgat gcgcttcttg acgaagcact tgacgagagc ttcccggcca
     4621 gcgaccctat tgcaatcagc ttttattctc cgcgcgggac cgcccaattg tgacatacat
     4681 ctgttggtgg ctgaacgtca tgtaatggag tgtaagaagc gccgagaggt atcgtaatgg
     4741 tcgaacattc tgatgaagtg gatgaaattc cgcgcctgaa atggccacgc cggtttccgg
     4801 tgccgcgtga ttttggtgtc gcaaaaggct cgcgtatctc cgaggggaaa tcctggcccg
     4861 cacctgatgg tgctacccgg attgcaacct tgcgcattta tcgctttagc ccggatggtg
     4921 aagaaggccc ccggatggac accttccgcg tcgatc
//
LOCUS       DTVW01000095            1082 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1137229, whole
            genome shotgun sequence.
ACCESSION   DTVW01000095 DTVW01000000
VERSION     DTVW01000095.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1082)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1082)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1082
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1137229"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>1082
                     /locus_tag="EYO87_01310"
     CDS             <1..>1082
                     /locus_tag="EYO87_01310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_355835.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease"
                     /protein_id="HIC64641.1"
                     /translation="LAIQIFRADHTAYSKKLQRVVMLRDAPDHDSNDFVLLGCILDAT
                     GMGRAIVSFLASFLGHVKAGMSYVLLGSLFLVSGISGSKVSDMATVAPALFPEMKRRG
                     HSVPEMTAQMAAGAAMADTVPPSIVLIVLGSVAGVSIAGLFTAGLFIAMVLLVALAVL
                     ARWKARAEDMSAVRRATWGDAGRAAVIAVPALVLPFMIRGLVGGGVATATEVSTVAVL
                     YAWVAGIVLYGGIPMRRITPMLVETVAMSGAILLILGAASAMAWGLTQSGFARDLLTF
                     VTGLPGGAATFILASIVIFLVLGCVLEGLPAIVLLAPIMFPIARGLGIHDIHYAMIVV
                     TAMNIGLMAPPIGIGFYIACKIGGAEA"
BASE COUNT          131 a          334 c          389 g          228 t
ORIGIN      
        1 ctggccattc agatctttcg tgcggatcac actgcctatt caaaaaagct gcagcgggtt
       61 gtgatgttgc gggacgcccc cgaccacgat agtaatgact tcgtgctgct gggctgcatt
      121 ctggacgcga ccggcatggg ccgcgccatc gtcagtttcc tggcgtcgtt cctggggcac
      181 gtgaaggccg ggatgagcta tgtcctgctg ggatcgctgt ttctggtttc cgggatttcg
      241 gggtcgaagg tgtcggacat ggccaccgtc gccccggcgc tgtttcccga aatgaagcgg
      301 cgcggccatt cggtgccaga gatgacggcc cagatggcgg cgggcgcggc gatggccgat
      361 acggtgccgc cctcgatcgt gctgatcgtg ctgggctcgg tcgcgggcgt atcgattgcg
      421 gggctgttca cggccgggct gttcatcgcg atggtgctgc tggtcgcgct ggcggtgctt
      481 gcccgctgga aggcgcgggc cgaggacatg tcggcggtcc gccgcgccac ctggggcgat
      541 gccggccggg cggcggtgat cgcggtgccg gcgctggtcc tgcccttcat gatccgcggc
      601 ctggtcggcg gcggcgtggc caccgcgacc gaggtttcga ccgtcgccgt gctctatgcc
      661 tgggtcgccg ggatcgtgct ttacggcggc atcccgatgc gccggatcac gccgatgctg
      721 gtggaaaccg tcgccatgtc gggtgcgatc ctgctgattt tgggcgcggc ctcggcgatg
      781 gcctgggggc tgacgcaatc gggcttcgcg cgcgatctgc tgaccttcgt caccggtctg
      841 ccgggcggtg cggcgacctt cattctggcc agcatcgtga tctttctggt gctgggctgc
      901 gtgctggagg gtctgcccgc catcgtgctg ctggcgccga tcatgtttcc catcgcgcgc
      961 ggcctcggca tccacgacat ccactacgcg atgatcgtcg tgaccgcgat gaatatcggt
     1021 ctgatggcgc cgcccatcgg catcggtttc tacatcgcct gcaagatcgg cggggccgag
     1081 gc
//
LOCUS       DTVW01000096            1464 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1141069, whole
            genome shotgun sequence.
ACCESSION   DTVW01000096 DTVW01000000
VERSION     DTVW01000096.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1464)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1464)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1464
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1141069"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            35..1261
                     /locus_tag="EYO87_01315"
     CDS             35..1261
                     /locus_tag="EYO87_01315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018067367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-hydroxy-acid oxidizing protein"
                     /protein_id="HIC64642.1"
                     /translation="MADQDTGSVAIVRRKAATAPRHLRQVLSLHDFEPLARRRLPRSV
                     FGYVSGGVEAEVTLRANRAAFDRIALQPRILRDVSVRSQRLALFGQDHAVPFAVAPMG
                     FSSLAAYDGDVALARAARQAGSFAICSAATLTPLERVATEGGSGWFQCYIPGDRARIE
                     GLLARVAQAGFHTLVVTGDVPVAANRENNARNGFDAPFRITPQLIWQGLTHPRWTIGT
                     LGREVTARGMPHFENMEAVQGPPLFSRDLVRSTIARDRLNWDDLRFIRDRWQGRLLVK
                     GVLHPADAQTAAEAGCDGIIVSNHGGRQLDGSVATLEVLPAIRAAVPDMAVIFDSGIR
                     RGTDVLKALMLGADFTLVGRPFLYAAATHGVEGVHHAMRLLADEVDRDMALLGVCSIA
                     ELRDQMPLLLPADWRG"
     gene            complement(1277..>1464)
                     /locus_tag="EYO87_01320"
     CDS             complement(1277..>1464)
                     /locus_tag="EYO87_01320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009505035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HIC64643.1"
                     /translation="FCMNMQVSFLSPPFGPAAFYLKSVVPPDISLGEIFRSLMPFILL
                     QVLAVAMLILFPGIAMY"
BASE COUNT          216 a          462 c          546 g          240 t
ORIGIN      
        1 tggtaagcgg ggccggtgga tcggcggggg tggcatggcg gatcaggata cgggttcggt
       61 cgcgatcgtg cggcgcaagg cggcgaccgc gccgcgccac ctgcggcagg ttctgtcgct
      121 gcatgatttc gaaccgctgg caaggcgtcg cctgccgcgc tcggtcttcg gctatgtcag
      181 cggcggggtc gaggccgagg tgacgctgcg cgcgaaccgc gccgccttcg accggatcgc
      241 cctgcagccg cgcatcctgc gcgacgtgtc ggtccggtcg cagcggctgg ccctgttcgg
      301 tcaggatcat gccgtgccct ttgccgtcgc gccgatggga ttcagttcgc tggccgccta
      361 tgatggcgac gtggccctgg ccagggcggc gcggcaggcg ggcagcttcg cgatctgttc
      421 ggccgccacg ctgacgccgc tggaacgggt cgcgaccgag ggcggcagcg gctggtttca
      481 gtgctacatt cccggcgacc gggcccggat cgagggattg ctggcccgcg tcgcgcaggc
      541 cggctttcac accctggtcg tgaccggcga cgttcccgtc gcggcaaacc gcgaaaacaa
      601 tgcccgaaac ggattcgacg cgccgtttcg catcacgccg caactgatct ggcagggcct
      661 gacccatccg cgctggacca tcggcacgct gggccgcgag gtgaccgcgc gcggaatgcc
      721 gcatttcgag aacatggagg cggtgcaggg tccgccgctg ttctcgcgcg atctggtccg
      781 ttcgaccatc gcgcgggacc ggctgaattg ggacgacctg cgctttatcc gcgaccgctg
      841 gcaggggcgc ctgctggtca agggcgtgct gcatccggcc gatgcgcaga cggccgccga
      901 ggccgggtgc gacggcatca tcgtgtcgaa ccatggcgga cgtcagcttg acggctctgt
      961 cgcgacgctg gaggtgttgc ccgcgatccg cgcggcggtg cccgacatgg cggtgatctt
     1021 cgacagtggc ataaggcgcg gcaccgacgt gctgaaggcg ttgatgctgg gcgccgattt
     1081 cacgctggtc gggcggccgt tcctgtatgc ggcggcgacc cacggggtcg agggcgtgca
     1141 ccacgcgatg cggctgctgg ccgatgaggt cgatcgcgac atggcgctgc tgggcgtgtg
     1201 cagcatcgcc gagttgcgcg atcagatgcc gctgctgctg ccggcggact ggcgcggctg
     1261 agaaccggcc cccggcttag tacatggcga tgccggggaa caggatcagc attgccacgg
     1321 ccagcacctg caacaggatg aagggcatca ggctgcgaaa gatctcgccc agcgatatgt
     1381 cgggcgggac gaccgatttc aggtagaagg cggccggccc gaagggcggc gacaggaagc
     1441 tgacctgcat gttcatgcag aaga
//
LOCUS       DTVW01000097            1601 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1142249, whole
            genome shotgun sequence.
ACCESSION   DTVW01000097 DTVW01000000
VERSION     DTVW01000097.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1601)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1601)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1601
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1142249"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..381)
                     /locus_tag="EYO87_01325"
     CDS             complement(<1..381)
                     /locus_tag="EYO87_01325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HIC64644.1"
                     /translation="MDRKRIWGWWFFDWASQPYATLLLTFVFSIYFAEIAKSHFIALG
                     DGVTLAGARAQALWGYGLSVSGVVIAVLAPILGAVADTSGRRMPWVWLFSALYVLGAA
                     GLWFVVPEQPPLIAAVTLFGIGLIG"
     gene            complement(424..984)
                     /locus_tag="EYO87_01330"
     CDS             complement(424..984)
                     /locus_tag="EYO87_01330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005653997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HIC64645.1"
                     /translation="MYPLIRFAKEMIKFRGAPPLGPMDAHVSTHRCWPWDLDPWIELN
                     NGRTLTLYDLGRIPLASRTGLLPVLREKGWGITVAGNSTRYRRRIRAFERFTMISRMV
                     GWDDRFIYMDQSMWKGSECCNQVLIRSAVTSRQGIVPPPRLMQALGHPVGSPDLPGWV
                     QAWIDADAARPWPPLVPDGTKGDLPV"
     gene            1122..1415
                     /locus_tag="EYO87_01335"
     CDS             1122..1415
                     /locus_tag="EYO87_01335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggT family protein"
                     /protein_id="HIC64646.1"
                     /translation="MGTLYEALQLILQVVWFVMIVHIIMSWLINFQVLNLRQPLVAQI
                     WDGLNRLLEPLYRPIRNILPNTGGLDLAPLVVFIIIIILQRALANNAGFFYGM"
     gene            1415..>1601
                     /locus_tag="EYO87_01340"
     CDS             1415..>1601
                     /locus_tag="EYO87_01340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007794160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HIC64647.1"
                     /translation="MPRDVPADDLLRQVWGFDGFRPGQGEIVEAVAQGREVLAIMPTG
                     GGKSLCYQLPALCFDGLT"
BASE COUNT          286 a          541 c          515 g          259 t
ORIGIN      
        1 gccgatcagg ccgatgccga acagcgtgac cgcggcgatc agcggcggct gttcggggac
       61 cacgaaccac agccccgcgg cgcccaggac atacagcgcc gagaacagcc agacccaggg
      121 catccggcgt cccgaggtgt cggccaccgc ccccaggatc ggcgccagaa ccgcgatcac
      181 gacgccgctg accgacagac cgtaacccca caacgcctgc gcacgcgccc ccgccagcgt
      241 cacgccgtcg cccagggcga tgaaatggct tttcgcgatc tcggcgaaat agatcgagaa
      301 gacgaaggtc agcagcagcg tggcataggg ctggctggcc cagtcgaaaa accaccagcc
      361 ccagatccgc ttgcggtcca tctcgtcccc cggtcgcttt ttcgccataa ggcccgaggc
      421 gggtcagact ggcaagtcac ctttcgtgcc gtcgggaacc agcggcggcc agggccgtgc
      481 cgcatcggcg tcgatccagg cctgcaccca gccgggcagg tcggggctgc cgaccggatg
      541 gccaagcgcc tgcatcagcc gcggcggggg gacgatcccc tgccgggatg tcaccgctga
      601 acggatcagc acctgattgc agcattcgga tcccttccac atggactgat ccatgtagat
      661 gaagcgatca tcccagccga ccatgcgcga gatcatcgtg aacctctcga aggcgcggat
      721 tcgccgccgg tagcgggtcg agtttccggc gacggtgatc ccccagcctt tctcgcgcag
      781 aaccggcagc agcccggtgc gggaagccag cgggatccgg cccaggtcgt acagggtcag
      841 ggtgcggccg ttgttcaact cgatccaggg atccagatcc catggccagc agcgatgggt
      901 cgagacatgc gcgtccatcg gtccaagcgg cggcgcgccg cggaacttga tcatctcctt
      961 ggcgaaacgg atcagcggat acatcgggcc cccttctgtt gccgggcagg gccgggcgtg
     1021 gcccggcccg gcggcatcgt caacccgaac gctgcggcaa ccgggttgca cgccggcgcc
     1081 ggcgcctgca tagaggtccg gaccgcgacg acgagggcac aatgggaacg ctgtacgagg
     1141 ccttgcaact gatcctgcaa gtggtgtggt tcgtgatgat cgtccacatc atcatgtcct
     1201 ggctgatcaa ttttcaggtt ctgaacctgc gccagccgct ggtcgcgcag atctgggacg
     1261 ggctgaaccg gcttctggaa cctctctacc gtccgatccg caacatcctg cccaataccg
     1321 gcgggctgga tctggcgccg ctggtcgtgt tcatcatcat catcatcctg caacgcgccc
     1381 tggccaacaa tgccggcttc ttctacggca tgtgatgccc agggacgtgc ccgccgacga
     1441 tcttctgagg caggtctggg gctttgacgg ctttcgaccc ggccagggcg agatcgtcga
     1501 ggccgtggcc caaggccgcg aggttctggc gatcatgccg accggcggcg gcaagtcgct
     1561 gtgctatcag ctacccgcgc tgtgtttcga tgggctgacg c
//
LOCUS       DTVW01000098            1615 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1143032, whole
            genome shotgun sequence.
ACCESSION   DTVW01000098 DTVW01000000
VERSION     DTVW01000098.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1615)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1615)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1615
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1143032"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(1..423)
                     /locus_tag="EYO87_01345"
     CDS             complement(1..423)
                     /locus_tag="EYO87_01345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018000313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family peroxiredoxin"
                     /protein_id="HIC64648.1"
                     /translation="MITRKGSAKWDGGLKDGKGLVSTQSGALSDQPYGFGTRFEDKPG
                     TNPEELIGAAHAACFSMALAMMLEQEGISGVSIETSSKIGLDKEGEGFAVKTAHLVTT
                     IGADGDESKVLEVAQKAKEGCPISKLLNAEITMEASVR"
     gene            621..1499
                     /locus_tag="EYO87_01350"
     CDS             621..1499
                     /locus_tag="EYO87_01350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008536991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HIC64649.1"
                     /translation="MYDDPVLRLRRFQRAVTTETGALDGSFLGRGRPLGAARVLNAIG
                     RGRQDVAAIRADLELDSGLLSRLLRGLEAEGLIAMTADPGDARRRRARLTEAGRAEFD
                     AYEAIADDRARALLDRHPQRQALLEAMDLIATAFGRDRIALREVDPRDPAALHCLGQY
                     YGELARRFARGFDVSLSCDPEAADMMPPRGVFLVAVAEDMPIGCAGLKGRPDGTSAEV
                     KRVWVAPSARGLGLARRMMDRIEDCARAQGRARLLLDTNSALREAVALYRRLGWTAIP
                     RFNDDPYPDLFFEKRL"
BASE COUNT          252 a          516 c          565 g          282 t
ORIGIN      
        1 tcagcgaacg gatgcctcca tggtgatctc ggcgttgagc agcttggaga tcgggcagcc
       61 ttccttggcc ttctgcgcca cctccagcac cttcgattca tcgccgtcgg cgccgatcgt
      121 cgtcaccaga tgggcggtct tgaccgcgaa cccctcgcct tccttgtcca ggccgatctt
      181 cgaactggtc tcgatgctga cgccggagat gccttcctgt tccagcatca tcgccagcgc
      241 catggaaaag caggcggcat gggccgcgcc gatcaattcc tcgggattgg tgcccggctt
      301 gtcctcgaac cgggtgccga agccataggg ctgatcggac aatgcgccgg actgggtcga
      361 gaccaggccc ttgccatcct tcagcccacc gtcccatttg gccgatcctt tgcgggtaat
      421 catgcgtcgt cctccgtgat gatgtctgtc gtgacaacgc gggggccctg cggtagttcg
      481 gcggacaagg aaatattaac ggcggggcgt ttcctcaccg cagcctccgc tgcggccgac
      541 cgatcggcaa catccaggct tgcgcggcat cgcgatcgga tttagctgac cagggtcagg
      601 taaggatcgc gaggcttgcg atgtatgatg atcccgttct gcgcctgcgc cggttccagc
      661 gcgccgtgac gaccgagacc ggggcgctgg atgggtcgtt tctggggcgg ggccggccgc
      721 ttggcgcggc gagggttctg aatgcgatcg gccggggccg gcaggacgtg gccgcgatcc
      781 gcgccgatct ggaactggac agcggtctgc tgagccggct tctgcgcggg ctggaggccg
      841 aggggctgat cgcgatgacg gccgatccgg gcgatgcacg gcggcggcgg gcgaggctga
      901 ccgaggccgg gcgggccgaa ttcgacgcct acgaggcgat cgccgatgat cgcgcccggg
      961 ccttgctgga ccgccatccc cagaggcaag ccctgctgga ggcaatggac ctgatcgcga
     1021 cggctttcgg gcgtgaccgg atcgcgctgc gcgaggtcga tccgcgcgac ccggcggcgc
     1081 tgcattgtct ggggcaatat tacggcgaac ttgccagacg gttcgcgcgc ggcttcgacg
     1141 tgtcgctgtc ctgcgatccc gaggcggcgg acatgatgcc gccgcgcggg gtgtttctgg
     1201 tggcggtcgc cgaggacatg ccgatcggct gcgccggcct gaagggccgt ccggacggca
     1261 caagcgccga ggtcaagcgc gtctgggtcg cgccctcggc gcgcgggttg gggctggcgc
     1321 ggcggatgat ggaccggatc gaggactgtg cccgcgcaca gggcagggcg cgtctgctgc
     1381 tggacaccaa cagcgcgctg cgcgaggccg tggccctgta tcggcgcctc ggctggaccg
     1441 cgatcccgcg gttcaacgac gatccctatc ccgatctgtt cttcgagaaa cggctctgac
     1501 ggtcatcgtt gccagaagcg cggcaagaac aggaccagga ccgagatcag ttccagccgc
     1561 cccagaaaca tgccgaagat catcatccac ttggccgcca agggaaaatc cgcga
//
LOCUS       DTVW01000099            1163 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1143451, whole
            genome shotgun sequence.
ACCESSION   DTVW01000099 DTVW01000000
VERSION     DTVW01000099.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1163)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1163)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1163
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1143451"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(141..>1163)
                     /locus_tag="EYO87_01355"
     CDS             complement(141..>1163)
                     /locus_tag="EYO87_01355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_351809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HIC64650.1"
                     /translation="GEADLVEEIARIASLTGLQGKPLPRPQPGVPKPILTPLQVRERT
                     ARRQAAALGYNECVTYSFIDQDAALLFGGGGDSVRVENPISSEMTHLRPDLLPGLLAA
                     AARNQARGLTDMALFEIGPVFAGGEPGEQAIRLSGLLVGATAPRDPFGSHRKVDLYDA
                     KADAEAVLTAIGAPAKAQINRKLDGWWHPGRAGNIALGPNMLATFGEIHPRVMRRMQL
                     KGPAVGFTISIANIPFPKQKSSARPTLQMSELQAVERDFAFVVDPQVEALTLVNAAQG
                     ADKTLIDRVTVFDQFTGLDDGRKSIAITARLQPRDKTLTDAEIEAVCQKIIDKVTKAT
                     GGALRG"
BASE COUNT          191 a          395 c          376 g          201 t
ORIGIN      
        1 attcccatca cccgctccaa cgcctccagg acatatcgga tcggccgcac gcgaacctgt
       61 caccgggcgc cacgggccgg ttccagcgac atggccggcc ccccttcggg cggatgcgtt
      121 tgacgcggaa aggccagtgg tcagccgcgc agggcacccc cggtcgcttt cgtgaccttg
      181 tcgatgatct tctggcagac tgcctcgatc tcggcgtctg tcagggtctt gtcgcgcggt
      241 tgcaggcgtg cggtgatggc gatggacttg cggccatcgt caagcccggt gaactggtcg
      301 aacaccgtca cgcggtcgat cagcgtcttg tccgcgccct gcgccgcatt gaccagcgtc
      361 agcgcctcga cctgcggatc gacgacgaag gcgaaatcgc gttcgaccgc ctgcaattcc
      421 gacatttgca gcgtgggacg ggcagacgat ttctgcttcg ggaagggaat gttcgcgatg
      481 ctgatggtaa agccgaccgc cggacccttc agctgcatcc ggcgcatcac cctggggtga
      541 atctcgccga acgtggccag catgttgggg ccaagcgcga tattgccagc gcggcccgga
      601 tgccaccagc cgtccagctt gcgattgatc tgcgccttcg cgggcgcgcc aatggccgtc
      661 agcaccgcct cggcatcggc cttggcgtca tacagatcca ccttgcgatg gctgccgaaa
      721 ggatcgcgcg gagccgtggc gccgaccagc aggcccgaca gccggatcgc ctgttcgccc
      781 ggctcgccgc ccgcgaaaac gggaccgatc tcgaaaagcg ccatatcggt caggccgcgc
      841 gcctggttgc gcgccgctgc cgcaagaaga ccgggcagca gatcgggacg cagatgcgtc
      901 atctcgctgc tgatcgggtt ttcgacccgg accgaatcgc cgccgccgcc gaaaagcagc
      961 gccgcgtcct ggtcgatgaa ggaataggtg acgcattcgt tatagccaag cgccgccgcc
     1021 tgtcgacgcg cagtcctttc gcggacctgc agcggcgtca ggatcggctt tggaaccccc
     1081 ggctgcggac gcggcaacgg cttgccctgc agtccggtca ggctggcgat gcgggcgatt
     1141 tcttcgacca gatcggcctc gcc
//
LOCUS       DTVW01000100            1964 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1149602, whole
            genome shotgun sequence.
ACCESSION   DTVW01000100 DTVW01000000
VERSION     DTVW01000100.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1964)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1964)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1964
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1149602"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..823
                     /locus_tag="EYO87_01360"
     CDS             <1..823
                     /locus_tag="EYO87_01360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008596292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HIC64651.1"
                     /translation="LRFGNTALWGGIGALLAWNLLSRGGRETIRQVIDSLAEGAKTAL
                     PVGVATALVGVIIGTMTLTGAANTFGIYIVSVGQNSLILSLILTMLTCIVLGMGIPTI
                     PNYIITSTIAAPALLQLGVPLIVSHMFVFYFGILADLTPPVALACFAAAPIARENGLK
                     ISMEALKVAAAGFVIPFMAVYTPALMLQDGGPLVASVGFAPAVAYIVGKSVLAIGLWG
                     VAVIGWLGHRLPVWQRLLAAAAAFTMIAALPLTDEIGFALAALFAGVWWLRTRAA"
     gene            820..1179
                     /locus_tag="EYO87_01365"
     CDS             820..1179
                     /locus_tag="EYO87_01365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013651833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1850 domain-containing protein"
                     /protein_id="HIC64652.1"
                     /translation="MSGCLLAGMVTLALSGADFRLEWTHSVERQIWREEWRIEGDKLV
                     LAGAAIKGSGAGMEPGPDARLVDGWWVWTPDLPPRDKLILAASGATGGGWRICDDATC
                     REIGMARSDPIILRPCP"
     gene            1256..1636
                     /locus_tag="EYO87_01370"
     CDS             1256..1636
                     /locus_tag="EYO87_01370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64653.1"
                     /translation="MMTQSGYSFIVIERDTFVARDMCAGLLAACPGCDVINLRFPSEL
                     VSQVSPSADEVPVIVTKMNVQEVEDSGLADWAIANGAEIVIRAGDDPVTEVIRKGWRS
                     LTSPFTREDLSHLVNSLTGLRRAG"
BASE COUNT          313 a          628 c          633 g          390 t
ORIGIN      
        1 cctgcgtttc ggaaacacgg ccctgtgggg cggcatcggc gcgctgctgg cctggaacct
       61 gttgtccaga ggcggacgcg agaccatccg tcaggtcatc gacagccttg ccgaaggcgc
      121 caagaccgcc ctgccggtgg gcgtcgccac cgcgctggtc ggcgtcatca tcggcaccat
      181 gaccctgacg ggggcggcca acacattcgg aatctacatc gtctcggtcg ggcagaacag
      241 cctgatcctg tcgctgatcc tgaccatgct gacctgtatc gttcttggca tggggattcc
      301 gacgatcccg aactatatca tcacctcgac catcgccgcg cccgcgttat tgcaattggg
      361 cgtgccgctg atcgtcagcc acatgttcgt cttctatttc ggcatcctcg ccgacctgac
      421 gccgccggtc gcgctggcct gtttcgcggc cgcgcccatc gccagggaaa acggcctgaa
      481 gatcagcatg gaggcgctga aggtcgcagc ggcaggcttc gtcattccct tcatggccgt
      541 ctatacgccc gccctgatgc tgcaagacgg ggggccgctg gtcgcatctg tcggatttgc
      601 ccctgccgtg gcctatatcg tcggcaaatc cgtgctggcc atcgggctgt ggggcgtggc
      661 ggtgatcggc tggctgggac acaggctgcc cgtctggcag cggctgctgg ccgcggctgc
      721 cgcctttacc atgatcgccg ccctgcccct gaccgacgag atcggctttg cgctggctgc
      781 cttgtttgca ggggtctggt ggctgcggac gcgcgcggca tgagcggctg tctgctggcg
      841 ggaatggtga cgctggcgct ttccggggcc gatttccgtc tggaatggac ccattcggtc
      901 gagcggcaga tctggcgcga ggagtggcgg atcgagggcg acaagctggt gcttgccggc
      961 gccgcgatca agggttcggg cgcggggatg gagcctgggc ctgatgcgcg cctggtcgat
     1021 ggatggtggg tctggacgcc ggatcttcca ccccgggaca agctgatcct ggcggcaagt
     1081 ggggcaaccg ggggcggttg gcggatctgc gacgacgcga cctgccgcga aatcggcatg
     1141 gcccgttccg accccatcat cttgcggccc tgcccctgat ccataccaga cagagattcg
     1201 cgggcttgat ctaaattgag ttgatcaaaa gacgccgaga tggaaaggtg gacgcatgat
     1261 gactcaatcc ggctacagtt tcatcgtgat cgaacgcgat accttcgtgg cccgcgacat
     1321 gtgcgccggc cttctcgccg cctgtcccgg ctgtgacgtg attaatctgc gctttccgtc
     1381 cgagcttgtt tcgcaggtat caccgagtgc cgatgaggtt cccgtgatcg tcacgaagat
     1441 gaacgtgcag gaggtcgagg atagcggcct tgccgattgg gcaatcgcga acggcgcaga
     1501 aatcgtcatc cgagccggcg acgaccccgt gaccgaggtg atacggaaag gctggcgcag
     1561 cctgacctcg ccattcacgc gcgaggatct gagccatctg gtcaattccc tgactggcct
     1621 tcgccgcgca ggctgagcgg cgaagtcttt atctacatca gatcgtcgtc gtcgaagacg
     1681 gtcttgggtc cttgccgccg ttcctgcaac ttggctgcca gcgtgacccc gatcgcgaaa
     1741 gccccgatca acttggccat gctgccggca ttgctgtctg cagcccgttt cgcgccgtcc
     1801 ctgacctgcc ccgcatccgc cttggcacga gccatgttct ggggcgtgat cccgaccgac
     1861 cgtgccaagc cgtagaatcg ctgcccggta tcatcggcaa tcctgccgac ccgatcgccc
     1921 gcatcgtcca gcagggattg cgcgcggctg cccgccaaat cgac
//
LOCUS       DTVW01000101            1526 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1151611, whole
            genome shotgun sequence.
ACCESSION   DTVW01000101 DTVW01000000
VERSION     DTVW01000101.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1526)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1526)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1526
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1151611"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            253..1248
                     /locus_tag="EYO87_01375"
     CDS             253..1248
                     /locus_tag="EYO87_01375"
                     /inference="COORDINATES: protein motif:HMM:PF13480.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HIC64654.1"
                     /translation="MQNAVWPKIAAPSQIQSYRYFVCSDKVGDVVSAGWVRLTRLYRG
                     RFSASLKRGPCTRTPEDLARIMPALEDALYRMGAISVAVNPHWQDEDAETCEDVLMRG
                     GYARVPSDEQTLPSATALIDLDGSEDALLGSFSQRRRRDLRSSGGTEVEVRPVASLAE
                     SSRLSEIMREMARTTGLEIDGQHDFSAHFRVLQAHPGLGTMNAALVDGKIIGGSVSYR
                     EAQRSYALLVATSPGMRGGRSTSLYWQNILDAKRQGSNVLDLVGYPDPRLSGSGEAAG
                     RQEFKDSFRPRIVTLPPIMKKVLRPVEARAYRELRRLYRRSRWKTQIKAIIHRSA"
     gene            complement(1240..>1526)
                     /locus_tag="EYO87_01380"
     CDS             complement(1240..>1526)
                     /locus_tag="EYO87_01380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003959864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HIC64655.1"
                     /translation="FGNAIVEAMAAGVPVISVDCPVGPKVLLRDGKAGRLVRRHTAAD
                     FGRALIEVTADAELRRSYVAAGRQVAGDFTVTAAVEAYESAFSDLLGPSC"
BASE COUNT          282 a          450 c          474 g          320 t
ORIGIN      
        1 cgatgtcgaa gatcttgtcc ttgaagactt tcttcatccg gtactttgaa aggtttttaa
       61 ctggagattt gggcatatta cgcgctccct tgtagaatcc gcaaaacttc tacgctacac
      121 tctgcctcgg tcggcagcgt aaaattttac acacggggga tcttcgtgaa ggttcatttt
      181 tctcaggacg ttgcggctcc gatcgttcag agtgccaaca ctcttgtcca gacatggcct
      241 tccgcgtcca tcatgcagaa cgctgtctgg cccaagatcg ccgcaccctc gcagattcaa
      301 tcctatcgtt atttcgtttg ctccgacaag gttggggatg tcgtttccgc aggatgggtt
      361 cgcctgacca ggctttatcg cggacgattc tccgcatcgc tcaagagggg gccgtgcacc
      421 cggacgccgg aggatctggc acggatcatg ccggcgcttg aagatgctct ttatcgcatg
      481 ggcgccattt cggtggcggt gaatccgcat tggcaggatg aggatgccga gacctgcgaa
      541 gacgtcttga tgcgcggcgg ctatgccagg gtgccatcgg acgagcagac gttgccgagc
      601 gcgacggcat tgatcgacct ggatggatcc gaggacgcgc ttttgggcag cttttcgcag
      661 cgacggcggc gggacctgcg cagttccgga ggcacggagg tcgaggtgcg ccccgtggcg
      721 tcgttggccg aatcgtcacg gctgagcgag atcatgcggg aaatggcccg gacgaccggg
      781 ttggagatcg atgggcagca tgatttttct gcccatttcc gcgtgcttca agcccatccg
      841 ggcttgggaa cgatgaatgc tgcgctggtc gatggaaaga ttatcggcgg ttcggtcagc
      901 tatcgcgagg cgcagcgcag ctatgcgctg cttgttgcca cgtcaccggg tatgcgcggc
      961 ggccgcagca cgtcgctgta ctggcagaat atcctggatg ccaagcggca gggcagcaat
     1021 gtgcttgatc tggtgggcta tcctgacccg cgtctgtcgg gatccggcga ggctgcggga
     1081 cgtcaggaat tcaaagacag cttccgtccc cggatcgtga cgctgccgcc gatcatgaag
     1141 aaggtgctgc gccccgtcga ggcaagggcc tatcgcgagt tgaggcgtct ctatcgccgc
     1201 tctcgctgga agacgcagat aaaggcgatc atccaccgat cagcatgacg gccccagaag
     1261 gtccgagaat gcggattcgt aggcttccac cgcggccgtg acggtgaaat cgccggcgac
     1321 ttgccggccg gccgccacat aggaccgacg aagctctgca tccgccgtca cctcgatcag
     1381 tgctcggccg aaatctgccg ccgtgtgacg tcgcaccagc cttccggcct tgccgtcacg
     1441 caaaagcacc ttcggcccga ccgggcaatc gacgctgatc accggcaccc ccgccgccat
     1501 ggcttcgacg atcgcgtttc cgaagc
//
LOCUS       DTVW01000102            1832 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1153889, whole
            genome shotgun sequence.
ACCESSION   DTVW01000102 DTVW01000000
VERSION     DTVW01000102.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1832)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1832)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1832
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1153889"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(168..1793)
                     /locus_tag="EYO87_01385"
     CDS             complement(168..1793)
                     /locus_tag="EYO87_01385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017997924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HIC64656.1"
                     /translation="MTNRQGKTTMKALLTSRAILLASAIAVAPAAFAQTPADVLVVAA
                     TIDDIITLDPAQSFEFSGNDVTQNLYDRLVDFDPMDMEAGFKPSLAESWEISEDGKTI
                     TFKMRDGVKFHSGNPVRAEDAAWSIQRAVKLNKTPSFILTQFGFTPENVDEMVKADGN
                     TLTIKLDKPYAQSFVLNCLTANIGSVVDKELVMSNAEGDDMGNTWLSNNDAGSGPFVL
                     NAWRPNEAVQMTAFPDYFQGAPAMSRVIVKNVAESSAQRLQLEQGDIDVARNLSPTDV
                     DALQTADGVKIQDEPRGRILYMGLNQKDELLSNPAVVEAMKYLVNYDGIAGSFLKGQF
                     KVRQAFLPEGYLGALDENPWTYDVEKARKILTDAGIEGGTITTKIRDLREYVDTAQTL
                     QASMAEVGLTLNIEQMTGAQVLDAYRAREVPIFLGEWGPDYSDPNTNAATFAYNPDNS
                     DEARATGLLAWRNAYAVPQSMNEATVAATLEQDTDKRAEMYRDIQKQYQAEAPIIPLF
                     QRIEPTGLRDNIQNWNSGRSVTSVMYRQVTKGE"
BASE COUNT          298 a          563 c          588 g          383 t
ORIGIN      
        1 acgaaggtga ccagcaacag acccagcatc gtcagcagca gcgacagcag gacgccgccg
       61 atgcgtctgg ccttgcgccg cgtcgccgcg gcgcggtgac cgcccggttc cggcggggtc
      121 ttgccccgtc cggtcccggt gttcaggtcg gccgcggaag acaaggccta ttcgcccttc
      181 gtcacctgtc gatacatgac cgaggtgacc gagcgtccgg aattccagtt ctggatattg
      241 tcgcgcaatc cggtcggttc gatgcgctgg aacagcggga tgatcggggc ctcggcctga
      301 tattgcttct ggatgtcgcg atacatctcg gcgcgcttgt cggtgtcctg ttccagcgtc
      361 gcggccaccg tggcctcgtt catcgactgc ggcaccgcat aggcgttgcg ccaggccagc
      421 aggccggtcg cccgcgcctc gtcgctgttg tcgggattat aggcgaaggt cgcggcattg
      481 gtgttcgggt cggaataatc cgggccccat tcgcccagga agatcggcac ctcgcgggcg
      541 cgataggcgt ccagaacctg cgcgccggtc atctgttcga tgttcagcgt caaccccacc
      601 tcggccatcg acgcctgcaa ggtctgtgcc gtatccacat attcccgcag atcgcggatc
      661 ttggtggtga tggtgccgcc ctcgatcccg gcatcggtca gaatcttccg ggccttctcg
      721 acgtcatagg tccaggggtt ttcgtccagc gcgcccagat agccttcggg caggaaggcc
      781 tggcgcacct tgaactggcc cttcaggaag ctgcccgcga tgccgtcgta attgaccagg
      841 tatttcatgg cctcgaccac ggcggggttc gacagcaatt cgtccttctg gttcaagccc
      901 atataaagaa ttcggccgcg cggttcgtcc tggatcttga cgccgtcggc ggtttgcagc
      961 gcatcgacat ccgtgggcga caggttgcgg gccacgtcga tgtcgccctg ttccagttgc
     1021 aggcgctgcg cgctggattc ggcgacattc ttgacgatca cgcggctcat cgccggcgcg
     1081 ccctggaaat aatccgggaa ggcggtcatc tggaccgcct cgttcggccg ccaggcattc
     1141 agcacgaaag gccccgaacc cgcgtcgttg ttggacagcc aggtattgcc catgtcgtcg
     1201 ccctcggcgt tactcatgac cagttccttg tccaccacgc tgccgatatt ggcggtcagg
     1261 cagttcagca cgaaggattg ggcatagggc ttgtccagct tgatggtcag cgtgttgccg
     1321 tcggccttga ccatctcgtc gacgttttcg ggggtaaagc cgaactgcgt caggatgaag
     1381 gaaggcgtct tgttcagctt cacggcgcgc tggatcgacc aggccgcgtc ttctgcgcgg
     1441 accggattgc cggaatggaa cttgacgccg tcgcgcatct tgaaggtgat ggtcttgccg
     1501 tcctcgctga tctcccagct ttcggccagg ctgggcttga agccggcttc catgtccatc
     1561 ggatcgaaat cgaccagccg gtcataaagg ttctgggtga cgtcgttgcc cgagaactcg
     1621 aaggactgcg ccgggtccag cgtgatgatg tcgtcgatgg tggcggcgac gaccagcacg
     1681 tcggccgggg tctgggcaaa agcggcgggc gcgacggcga tggccgatgc cagaagaatc
     1741 gcacgcgaag tgagcaaagc tttcatggtc gtttttccct gtcggttggt catgccccgt
     1801 gagccgggtt tcatgccgat caacgtggcg ca
//
LOCUS       DTVW01000103            1231 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1154869, whole
            genome shotgun sequence.
ACCESSION   DTVW01000103 DTVW01000000
VERSION     DTVW01000103.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1231)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1231)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1231
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1154869"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>1231
                     /locus_tag="EYO87_01390"
     CDS             <1..>1231
                     /locus_tag="EYO87_01390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008244964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HIC64657.1"
                     /translation="IPLFLALWKMPKFTERVHLLILILLVLSLSRPVLKHTLQKVAVE
                     AKDIIIALDVSYSMQATDIAPSRYVFAKDTIRALLKANPSDNVMLIAFTSNPLLLSPP
                     TTDHMLINIALESLNPDHILSKGTSLEKLFKKLSQIKSTSKNLILITDGGEEKELAKL
                     TALVNDANIRLSILALGTNSGTTVTKQDGSYLKDKEGNLVISRINPLLESLASSVGGT
                     YLRASSTAISTASTLSSTLDTQQDKAQEIQKMQHNYLELYQVPLALAALLFLLLHTRG
                     VKYLLILLTLFGFQAEASMLDIYHLSRAYEHYKKADYSTTLLTLKKITTPSLQSQMTL
                     ANTYYKQNNFKKAIKIYQSIRSTSIKTKQQLYYNIANAYSMQKAYSKAKVYYTKALQL
                     GVDADTKHNLALVALLV"
BASE COUNT          396 a          298 c          194 g          343 t
ORIGIN      
        1 tcatccctct ctttttagct ctgtggaaaa tgcctaaatt tacagagcgt gtacatcttc
       61 tcatcctcat actgcttgtg ctttcactct ctcgtcctgt acttaaacat accttgcaaa
      121 aagttgcggt agaagcaaaa gacatcatca ttgccttaga tgtctcctat tctatgcagg
      181 ctacagacat agcacctagt agatatgtct ttgccaagga taccataagg gctctgctaa
      241 aagccaaccc ttctgacaat gtgatgctca tcgcttttac ctctaaccct ttgttactct
      301 ctccacccac cactgaccat atgctcatca atattgcact agaaagtctg aaccctgatc
      361 acatccttag caaaggtact tcacttgaaa agctttttaa gaagctttcg cagataaaaa
      421 gtactagcaa aaatctcata ctcatcacag acggagggga agagaaagag ctagcaaaac
      481 ttactgctct cgtaaatgac gcaaacatac gccttagcat acttgcactt ggcacaaatt
      541 caggcacaac ggttacaaaa caagatggta gctacctcaa agacaaagaa ggaaaccttg
      601 tcatctctcg cattaaccct ctattggagt ctttagcttc tagtgttggg ggtacatact
      661 tgagggcttc aagcacagca atatccacgg catctactct ctcttctacc cttgatacac
      721 agcaagacaa agcccaagaa atacagaaga tgcagcacaa ctacctagag ctttatcaag
      781 tgcctttagc tttggctgca ttgttatttt tactcttaca tacgcgtgga gttaagtatt
      841 tactcattct tcttacttta tttggctttc aagcagaagc atctatgtta gacatctatc
      901 atctctctcg tgcatatgag cattataaaa aggcagatta tagcactacg cttttgacac
      961 taaaaaagat aacaacacct tccttgcaaa gccaaatgac cttggcaaat acttactaca
     1021 aacaaaataa ttttaaaaaa gctatcaaaa tttaccagtc tatacgctct acttctatta
     1081 agactaaaca acaactctac tacaacatag ccaatgccta cagcatgcaa aaggcatata
     1141 gtaaagccaa agtttactat actaaagcct tgcaactagg tgtagatgca gacacgaaac
     1201 acaacctagc cttagtagcc cttttggtag a
//
LOCUS       DTVW01000104            1122 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1157165, whole
            genome shotgun sequence.
ACCESSION   DTVW01000104 DTVW01000000
VERSION     DTVW01000104.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1122)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1122)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1122
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1157165"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..260)
                     /locus_tag="EYO87_01395"
     CDS             complement(<1..260)
                     /locus_tag="EYO87_01395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005795537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HIC64658.1"
                     /translation="MIRSDPNLRPEPLEGESEDRALRPQALTDFVGQADARANLRVFI
                     DSAKMRGKAMDHTLFFGPPGLGKTTLAQIMARELGVNFRMTSG"
     gene            complement(257..>1122)
                     /locus_tag="EYO87_01400"
     CDS             complement(257..>1122)
                     /locus_tag="EYO87_01400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="protease HtpX"
                     /protein_id="HIC64659.1"
                     /translation="AAMTAIVMGLGWMLGGSGGALFALVLAGAGNLFAWWNSDRMVLR
                     QQGAVQLGPGQASELHAMVADLAQRAGLPMPKVYLLPTEQPNAFATGRNPENAAIAVT
                     QGLLRSLSRDELAGVIAHELAHVRNRDTLIMTVTATMAGAIAMMGNFLLFTGGREGRG
                     GGLGAILAMLLAPVAAMLVQMAISRTREYEADRAGARICGRPDALASALAKIAQMAGR
                     STNVPAERNPAAASMFIINPLRGLRMDRLFATHPPTEDRIARLRAMEGETPPSRIPVT
                     GRRDAGPWGRG"
BASE COUNT          183 a          387 c          373 g          179 t
ORIGIN      
        1 cccgaggtca tgcggaaatt cacgcccagt tcgcgggcca tgatctgcgc cagcgtcgtc
       61 ttgcccagcc ccggaggacc gaagaacagg gtatggtcca tcgccttgcc gcgcatcttc
      121 gcgctgtcga tgaaaacgcg caggtttgcc cgcgcatcgg cctgtccgac gaaatctgtc
      181 agggcctgcg ggcgcagggc acgatcttcc gattcgcctt ccagcggttc gggacgcagg
      241 ttgggatcgg accggatcat ccgcgtcccc aggggccggc gtcccgccgc ccggtcaccg
      301 gaatgcgcga gggcggcgtc tcgccctcca tcgcgcgaag ccgcgcgata cggtcctcgg
      361 tcggcggatg ggtggcgaaa agacggtcca tgcgcaatcc gcgcagcggg ttgatgatga
      421 acatcgaggc cgcggccggg tttctttcgg ccgggacatt cgtgctgcgg cccgccatct
      481 gcgcgatctt ggccagcgcc gaggccagcg cgtcgggtcg gccgcagatc cgggcaccgg
      541 cgcggtcggc ctcgtattcg cgtgtacgcg agattgccat ctgcaccagc atcgcggcga
      601 caggcgccag cagcatggcg aggatcgccc caagaccgcc gccgcgcccc tcgcggcccc
      661 cggtgaacag caggaaattg cccatcatcg cgatcgcgcc ggccatggtc gcggtcacgg
      721 tcatgatcag cgtgtcacga ttcctgacat gggccagttc atgagcgatg acaccggcca
      781 gttcgtcacg gctcaggctg cgcagcaaac cctgcgtcac cgcgatggcg gcgttctcgg
      841 gattgcggcc ggtggcaaag gcgttgggct gttcggtcgg cagcagatag actttgggca
      901 tcggcaggcc tgcgcgctgc gcaagatcgg cgaccatcgc atgcagttcg gacgcctggc
      961 ctggaccaag ctgcacggcg ccctgttgac gcaggaccat cctgtcgctg ttccaccagg
     1021 cgaaaaggtt gcccgcaccc gccaggacca gcgcgaagag cgcaccgccc gatccgccca
     1081 gcatccagcc cagccccatg acgatggcgg tcattgccgc ca
//
LOCUS       DTVW01000105            1188 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1159018, whole
            genome shotgun sequence.
ACCESSION   DTVW01000105 DTVW01000000
VERSION     DTVW01000105.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1188)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1188)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1188
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1159018"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..877)
                     /locus_tag="EYO87_01405"
     CDS             complement(<1..877)
                     /locus_tag="EYO87_01405"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_353708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HIC64660.1"
                     /translation="MDQIIVQGNGPLRGEIPIAGAKNACLALMPATLLSDQPLTLTNA
                     PRLSDIRTMTALLQSLGAEVSGLQDGQVLAMSSHDLTSHRADYEIVRRMRASILVLGP
                     LLARFGQAEVSLPGGCAIGARPVDLHLKALEAMGADLDLRDGYVHATAPAGGLRGAVV
                     DFPLVSVGATENALMAATLARGTTILKNAAREPEIVDLARCLRAMGAQIEGEGSDTIT
                     IEGVDSLHGATHPVVTDRIELGTYMLAPAICGGEVECLGGRIDLLAAFCEKLDEAGIS
                     VEETPRGLKVARRNGR"
BASE COUNT          170 a          441 c          372 g          205 t
ORIGIN      
        1 cccggccatt gcgccgcgcg accttcagcc cgcgcggcgt ttcctcgacg ctgatacccg
       61 cttcgtccag cttctcgcag aacgccgcca gcaggtcgat ccgaccgccg aggcattcga
      121 cctcgccgcc gcagatcgcc ggggccagca tgtaggtgcc cagttcgatc cggtcggtga
      181 cgacaggatg ggtcgcaccg tgcagcgaat cgaccccttc gatggtgatc gtgtcgctgc
      241 cctcgccctc gatctgtgcg cccatcgccc gcaggcaccg tgccagatcg acgatctcgg
      301 gctcgcgcgc ggcattcttc aggatcgtgg tgccgcgggc cagggtcgcg gccatcagcg
      361 cattctcggt cgcgccgacc gaaaccagcg ggaaatcgac cacggcgccc cgaagtcctc
      421 ctgccggcgc ggtggcgtga acatatccgt cgcgcagatc cagatcggcc cccatcgcct
      481 caagcgcctt gagatgcaga tcgaccggac gcgcgccgat ggcgcagccg ccgggcaacg
      541 agacctcggc ctggccgaac cgcgccaaga gcggacccag caccaggatc gaggcccgca
      601 tcctgcgcac gatctcgtaa tcggcgcggt ggctggtcag atcgtggctg gacatggcca
      661 gcacctgccc gtcctgaagg ccgctcactt cggcccccag gctttgcagc agggccgtca
      721 tggtgcggat atccgacagt cgcggtgcat tggtcagcgt cagcggctga tccgaaagca
      781 gcgtcgccgg catcagcgca aggcaggcat tcttcgcgcc cgcgatggga atttcgcccc
      841 tcagcggccc gtttccctga acgatgatct ggtccatcta gctgtcgtcc ccgcccgtct
      901 cgctggcttc atcctcatcc gggtcggggg ccgaggcctc gcgcgcgcgc gcctgcgcct
      961 tgcgccgttg caggttggcc cgcaacgcgg cgcgaagcct gtccgcgcgc gtctcgggtt
     1021 cctgtctgtt tctgtcccgt ccggtcatgc ttcctgttat cgcccgcgcc ggccgccgtc
     1081 cagttgccgc ggcaagccag gcagcggcag gcatttcccg ataattcgcc cgatccccct
     1141 tgcgcggcgg cacagctttg tctaaacgcc gcccacgccg ctgcggta
//
LOCUS       DTVW01000106            1447 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1159271, whole
            genome shotgun sequence.
ACCESSION   DTVW01000106 DTVW01000000
VERSION     DTVW01000106.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1447)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1447)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1447
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1159271"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>1447
                     /locus_tag="EYO87_01410"
     CDS             <1..>1447
                     /locus_tag="EYO87_01410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009824775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="pyruvate ferredoxin oxidoreductase"
                     /protein_id="HIC64661.1"
                     /translation="QPVDGQISPQAIAHVSRAEGVSRIALVSDQPEKFAPNDLPSGAT
                     VHHRRDLDAVQRELRTVPGVSMLIYEQTCAAEKRRRRKRATMEDPNRVVVINELVCEG
                     CGDCSVASNCLSVEPVETEFGRKRRINQSSCNKDFSCIDGFCPSFVTLEGATRRKVEA
                     VDFDLDALLVELEQPVASALNDPFDLLVTGVGGTGVITVGALVTMAAHLEGKGSSVLD
                     FTGFAQKFGPVLSFVRIGRTPADINQVRIAEASANAVIACDAVVSASPRASVLYRPGT
                     RIALNLASMPTGDLVLNRDAQLSIERRQSAIATAVGAENLAAFDAGEAAERLLGDAVF
                     ANVIMLGFAWQSGMVPVSEAALMRAIELNGVAKAQNIRAFGIGRVLAARPGALTPQPV
                     QSDAVPETPTHVIERRSEFLEDYQSKAWARRYRDTLAILEARGAPEAHRIAAAKSLFK
                     LMSYKDEYEVARLHRSPEFKARLARDFDGDFT"
BASE COUNT          261 a          464 c          459 g          263 t
ORIGIN      
        1 gccagcccgt cgacgggcag atcagcccgc aggctatcgc ccatgtgagc cgcgcggaag
       61 gcgtcagccg catcgccttg gtgtcagatc agcccgagaa gttcgccccc aatgatcttc
      121 cgtcgggcgc cacggtgcat catcgccgcg atctcgatgc tgtgcagcgc gagttgcgta
      181 ccgtgccggg cgtgtccatg ctgatctacg aacagacctg tgcggccgag aaacggcggc
      241 ggcgaaagcg cgccacgatg gaggatccga accgcgttgt cgtgatcaac gaactggtct
      301 gcgagggatg cggcgattgc tccgtcgcgt cgaactgcct gtcggtcgaa ccggttgaaa
      361 cagaatttgg ccgcaagcgg cgcatcaacc agtcttcctg caacaaggac ttttcctgca
      421 tcgacggttt ctgccccagc tttgtgacac ttgaaggcgc gacacggcgc aaggtggagg
      481 cggtggactt cgacctagac gccctgcttg tcgaacttga acagccggtt gccagcgcgc
      541 tgaacgatcc cttcgatctt ctggtcaccg gcgtcggcgg gacaggggtc atcactgtgg
      601 gtgccttggt caccatggcc gcgcatctgg aaggtaaagg ctcgagcgtt ctcgacttta
      661 ccggctttgc gcagaaattc ggcccggtcc tgagtttcgt gcgtatcggt cgcacacccg
      721 ccgacattaa tcaggtacgc atcgccgagg ccagcgccaa cgcggtgatc gcctgcgatg
      781 ccgtggtctc ggcatcgccc cgcgcctcgg ttctgtatcg acccggaacc aggatcgcgc
      841 tgaacctcgc cagcatgccg accggggatc tggtgctgaa ccgagatgca cagctgtcga
      901 tcgaacggcg tcagtctgcg atcgcgaccg ctgtcggcgc cgagaacctc gcggccttcg
      961 atgcgggcga ggcggctgaa cgtctgctgg gcgacgcggt ttttgccaat gtcatcatgc
     1021 tggggtttgc ctggcaaagc ggaatggtcc cggtgtcgga agccgccctg atgcgggcga
     1081 tcgaactgaa cggcgtcgcg aaggcgcaaa acatccgggc cttcggcatc ggtcgcgttc
     1141 tcgccgcgcg tcccggggcg ctgacccctc agccggttca aagcgacgcc gtacccgaga
     1201 cgcccaccca tgtgatcgag cggcggagcg agttcctcga agactatcaa agcaaggcct
     1261 gggcacgccg ttatcgcgac accctcgcca tccttgaggc caggggcgca cccgaggcgc
     1321 accggatcgc ggcggccaaa tcgctgttca aactcatgtc ctacaaggac gaatacgaag
     1381 ttgctcgcct gcaccggtcg ccggaattca aagcccgcct cgcgcgggat ttcgacggcg
     1441 acttcac
//
LOCUS       DTVW01000107            1032 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1159965, whole
            genome shotgun sequence.
ACCESSION   DTVW01000107 DTVW01000000
VERSION     DTVW01000107.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1032)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1032)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1032
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1159965"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..905)
                     /locus_tag="EYO87_01415"
     CDS             complement(<1..905)
                     /locus_tag="EYO87_01415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012610788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HIC64662.1"
                     /translation="MRILILGGDGYIGWPTAMKLAAAGHQVMAVDNYLRRRLMREIDC
                     DALFDVPNLHERARLWADRSGKELAVRIGDLDDWTFIAAIFEEFVPDAIVHYAEQPSA
                     PYSMMDRAAARLTLDNNLGVTFNIIHAMNQFTPDAHLIKLGTMGEYGTPNIDIEEGWI
                     DIEHKGRKDRFLFPRAAGSFYHTTKVLDTDMLWFYVRVWGLRVTDLMQGPVYGLATDE
                     SADDDRLYSFLNYDEVFGTVLNRFMVQAVAGYPLTVYGKGGQTRGYLHLKDALQCVKL
                     AVETPAEPGELRIFNQFVETFSVNDL"
BASE COUNT          203 a          330 c          295 g          204 t
ORIGIN      
        1 agatcgttga cgctgaacgt ttcgacgaac tggttgaaga tgcgcaactc gcccggctcg
       61 gccggggttt cgacggccag cttcacgcat tgcagcgcat ccttgagatg cagatatccg
      121 cgtgtctgcc cgcccttgcc atagacggtc agaggatagc ccgccaccgc ctgaaccatg
      181 aaacggttca ggacggtgcc gaaaacctcg tcgtagttca ggaacgaata cagccggtcg
      241 tcatcggcgc tttcgtcggt cgccagccca tagaccgggc cctgcatcag atccgttaca
      301 cgcagccccc agacgcggac atagaaccac agcatgtccg tatcgagcac tttcgtcgtg
      361 tgatagaacg atccggccgc gcgcgggaac aggaaccgat ccttgcgtcc cttgtgctcg
      421 atatcgatcc agccttcctc gatatcgatg ttcggcgtgc catattcgcc catcgttccc
      481 agcttgatca gatgagcatc gggggtgaac tggttcatcg cgtggatgat gttgaaggtc
      541 acgcccaggt tgttgtccag cgtcagccgg gccgcagccc gatccatcat cgaatagggc
      601 gccgagggtt gttcggcata gtggacgatc gcgtcgggaa cgaattcctc gaagatcgcg
      661 gcgatgaagg tccagtcgtc cagatcgccg atccggaccg ccagctcctt gcccgagcgg
      721 tccgcccaca ggcgcgccct ttcgtgaagg tttggcacat cgaacaacgc gtcgcaatcg
      781 atctctcgca tcagccggcg tcgcagataa ttgtcgacgg ccatcacctg atgcccggcc
      841 gcggcaagtt tcatcgcggt cggccaaccg atatagccgt ccccgcccag gatcaaaatc
      901 cgcatcacgc ttccttcaga gtgtctcgag ttgtggaacc gtgccggcgg tgaccagcct
      961 tgcgacaacg ctttcgggaa gtacgccatc gcgcatcagc agcgcccaga tctgatcgtc
     1021 gccgatcgcc gc
//
LOCUS       DTVW01000108            1463 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1160031, whole
            genome shotgun sequence.
ACCESSION   DTVW01000108 DTVW01000000
VERSION     DTVW01000108.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1463)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1463)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1463
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1160031"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..773)
                     /locus_tag="EYO87_01420"
     CDS             complement(<1..773)
                     /locus_tag="EYO87_01420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018000205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HIC64663.1"
                     /translation="MAQDDRLEAVLAELDRGLESALQRLLDFLRIPSISTDPAHAGDV
                     RDAAEWLCAQLASLGFEASVMATEGHPMVIATSPPSGARPLLFYGHYDVQPVDPLALW
                     DRPPFEPEIQSTDAGDVIRGRGASDDKGQLMTFVEAFRAWKAVHGALPGDLILLFEGE
                     EESGSPSLRPFLLAQKDRLSASLAMICDTGLYADGRPAITTQLRGLVGEEVVIRAADR
                     DLHSGSFGGLAANPIMILTRALAALKDAEGRVTLPGFYEG"
     gene            940..>1463
                     /locus_tag="EYO87_01425"
     CDS             940..>1463
                     /locus_tag="EYO87_01425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005982543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HIC64664.1"
                     /translation="MDYDAALDQAIARLHDEGRYRTFIDIERSKGQFPLAVWTRPDGR
                     KQDITVWCGNDYLGMGQHPAVLGAMHEALDAVGAGSGGTRNISGTTVYHKRLEAELAD
                     LHRKEAALVFTSAYIANDATLSTLPKLFPGLIIYSDALNHASLIEGIRRNGGAKRIFR
                     HNDVAHLRELIEAD"
BASE COUNT          270 a          487 c          462 g          244 t
ORIGIN      
        1 ccctcgtaga agcccggcag ggtgacgcga ccctccgcgt ccttcagcgc cgccagcgcg
       61 cgcgtcagga tcatgatcgg gttcgcggcc agcccgccga aactgcccga atgcaggtcg
      121 cgatcggcgg ctcggatcac cacttcctcg ccgaccaggc cgcgcaattg cgtggtgatg
      181 gcggggcggc catccgcata gagcccggtg tcgcagatca tcgccaacga ggccgacagg
      241 cggtccttct gcgccagtag aaaggggcgc agcgagggcg aaccggattc ttcctcgccc
      301 tcgaacagca ggatcagatc gccgggcagg gcgccgtgaa ccgccttcca ggcgcgaaac
      361 gcctcgacaa aggtcatcaa ttggcccttg tcgtcgctgg cgccgcggcc gcgaatgacg
      421 tcaccggcat cggtggactg gatttccggc tcgaaaggcg gacggtccca cagggccagg
      481 ggatcaaccg gctgcacgtc gtaatggcca tagaacagca gcggacgcgc cccgctgggc
      541 ggcgaggtcg caatcaccat cggatggcct tcggtcgcca tcacgctggc ctcgaagccc
      601 agcgaggcaa gctgtgcgca aagccattcc gccgcgtcgc gcacgtcgcc cgcatgggcc
      661 ggatcggtcg agatcgaggg gattcgcaga aagtccagca gccgctgcaa ggccgactca
      721 agcccccggt ccagctctgc cagaaccgcc tccagcctgt catcctgcgc catgtggtcg
      781 tcctttcccg gtggtgtttg cagcttccgc gccctgttcc ttggtcgtgt cacggcgatt
      841 ttggtctgtt cttgccggaa tttgacgtgt atcaacttgg ggccgcgcgt gatctgacaa
      901 tgatcgcacc cagccagcta cgcaagggaa cgcccgcaca tggactatga cgccgccctg
      961 gatcaggcca tcgcacgttt gcacgacgag ggccgctatc gcacattcat cgatatcgaa
     1021 cgatcgaagg ggcagtttcc cctggccgtc tggacccgtc ccgatggcag gaaacaggac
     1081 atcaccgtct ggtgcggtaa cgattatctg ggcatgggcc agcatcccgc ggtcctgggc
     1141 gcgatgcacg aggcgctgga tgcggtcggc gccgggtcgg gcggaacgcg caatatcagc
     1201 ggcaccaccg tctatcacaa gcggctggag gccgaactgg ccgacctgca ccgcaaagag
     1261 gcagcattgg tgttcaccag cgcctacatc gccaatgacg ccacgctttc gaccctgcca
     1321 aagctgtttc cgggcctgat catctattcc gacgcgctga accacgcctc gctgatcgag
     1381 gggatccggc gcaatggcgg cgccaagcgg atctttcgcc acaatgacgt ggcgcatctg
     1441 cgcgaactga tcgaagcgga cga
//
LOCUS       DTVW01000109            1323 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1160249, whole
            genome shotgun sequence.
ACCESSION   DTVW01000109 DTVW01000000
VERSION     DTVW01000109.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1323)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1323)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1323
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1160249"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(23..1306)
                     /gene="tilS"
                     /locus_tag="EYO87_01430"
     CDS             complement(23..1306)
                     /gene="tilS"
                     /locus_tag="EYO87_01430"
                     /inference="COORDINATES: protein
                     motif:HMM:PF09179.9,HMM:PF11734.6,HMM:TIGR02432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="HIC64665.1"
                     /translation="MSDSPGVAVAFSGGLDSSVLLTALTRLELGRPIRALHIDHGLHP
                     DAGKWAQHCRRIAADLGVLFDSQQVSIAKAPGLSLEASAREVRYAALSGMMGPAELLL
                     TAHHSDDQLETVLLRLLRGSGVKGLRGIAPFARFGPGYLGRPLLAIAKQDIQSVATRW
                     GLDWVEDPTNPDTRFDRNYLRREVVPRLKQRWPGAAVTAGRAARQMRNAQEILDSAAL
                     ADSAGNNVSGRASQAALRELTVARRANLLRYRILELGLAVPSAGQLEKLLEALDVTRP
                     DAQTQVQWPGGECRIYRGELYLFRPMAPGSGPDYRGRLDHASSWNGPEGRLELCRTDG
                     PGLPDSWVRRGLTIRFRVGGERFKPLDRAHSRKLKKWLQLAGVVPWMRSRIPLLYRDD
                     DLVAVADLWLSDDIRQAQAGEPVWQVNWTDHPTID"
BASE COUNT          251 a          450 c          410 g          212 t
ORIGIN      
        1 cctggacatg cgggtgtgag gatcagtcga tggtcgggtg gtcggtccag ttcacctgcc
       61 agaccggctc gccggcctgg gcttgccgaa tgtcgtcgct cagccataga tcggcgacgg
      121 caaccagatc gtcgtcgcga tataggagcg gtatgcggct gcgcatccaa ggcacgacac
      181 cagccaactg caaccacttc ttcagcttgc gagaatgcgc tcgatcaagc ggcttgaaac
      241 gctctccgcc gaccctgaac cgaatcgtca agccccgccg aacccagcta tccggcagac
      301 ccgggccatc ggtacggcac agctcgagcc ggccttcggg gccgttccat gagctggcgt
      361 gatccagccg cccccgataa tcgggtcctg aaccaggcgc catcggcctg aacaggtaga
      421 gctcgccgcg atagatacgg cattcgccgc ccggccactg aacctgcgtc tgcgcgtccg
      481 ggcgcgtcac atcgagggcc tcgagcagct tctcaagctg gccggcgctg ggcacggcca
      541 gaccgagttc gagaattcga tagcggagca gattcgcgcg ccgcgcaacg gtcaactcgc
      601 gcaacgcggc ctgggatgcg cgcccggaga cgttattacc ggccgagtcc gccaacgcgg
      661 cggagtcgag gatctcctgc gcgttgcgca tttgccgcgc agcccgaccg gccgtcactg
      721 ccgcgccagg ccagcgctgc ttcaggcgcg ggacgacctc gcggcgaaga taatttcgat
      781 cgaaacgcgt atcgggattg gtcgggtcct cgacccagtc gagaccccat cgcgtggcga
      841 cactctgaat gtcctgtttg gcgatcgcca gcaacggccg tccaaggtaa ccgggaccga
      901 aacgggcaaa cggcgcaatg ccgcgcagac ccttgacacc acttcctcgc agcagccgca
      961 acaggaccgt ctccagctgg tcgtcgctgt gatgggctgt gagcaacaac tcagcggggc
     1021 ccatcattcc gctcagcgcc gcgtaacgaa cctcgcgcgc ggatgcctcc aagctaaggc
     1081 cgggcgcctt tgctatcgag acctgctggc tatcgaagag gacgcccaag tctgccgcga
     1141 ttcgccggca gtgttgggcc cactttcccg cgtcgggatg aagcccatga tcgatatgca
     1201 aggcgcggat cggtctgcca agttccagtc gagtcagcgc ggtcagcagc acgctcgagt
     1261 ccagtccgcc actgaacgcc accgcaacgc cgggcgaatc ggacatcacc ggaaactgct
     1321 cga
//
LOCUS       DTVW01000110            2475 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1161079, whole
            genome shotgun sequence.
ACCESSION   DTVW01000110 DTVW01000000
VERSION     DTVW01000110.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2475)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2475)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2475
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1161079"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(519..1646)
                     /locus_tag="EYO87_01435"
     CDS             complement(519..1646)
                     /locus_tag="EYO87_01435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64666.1"
                     /translation="MFRFRCSSFPVLVIGIALATAPRSVIAQDQDPAQRAQALRQIIV
                     TMEDEARQLETKVAQARARLDDLNRQAEAAEQELAALDGKAAQARDELAALTAQRDTR
                     RAENTAAGEKLAGLRGTAVTLDARIEALAERHEQAKRDLARIEKAGADREQVLAEIET
                     ARTRAATLRDEVAALVQQRDALQAGAAAAGQAATKLTEDRAQLARQRDTLTAEIKALT
                     GRRDQLQRQQARAAELTGRIASQESALADLQARAGTLREEVATLTESRDSLQAGLNRI
                     RAQTAAAGAAQSPPARSAAPPATGEAPTTAEAASATGRSPDAVDAALAAAPGLPDSPS
                     QWMPLRKALIRGDCTPKALARIQKPVNRQTLLALMSRLEGC"
     gene            1896..>2475
                     /locus_tag="EYO87_01440"
     CDS             1896..>2475
                     /locus_tag="EYO87_01440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019953605.1"
                     /note="has catalase and peroxidase activities; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catalase-peroxidase"
                     /protein_id="HIC64667.1"
                     /translation="MDGKDMESGGCPVMHGGSALNTFFGGRSNREWWPNQLNLKILHQ
                     NTPLGNPMGGDFDYKAEFQKLDIDAVKNDLFALMTDSKDWWPADYGHYGPFFIRMAWH
                     SAGTYRSGDGRGGSSSGSQRFAPLNSWPDNANLDKARRLLWPVKQKYGDALSWADLLI
                     LAGNCAIESMGGKVFGFGGGREDIWEPEEDIYW"
BASE COUNT          379 a          826 c          843 g          427 t
ORIGIN      
        1 ccagtattcc gaggccgggc tgggtgtgcc gatcgatctg caacgcgccc gcgcctggta
       61 tggaatggcc aacggcatct cgggggccga ggcacggctg aaagccctga cggagattcc
      121 cgaagcgcag aaccagaccg cgcggcctgt cccggtcatg caggccttgt ttcggaccgg
      181 ccagacggaa ctgcactggc gcgcggcgga tggacaaagc ccggccggct tcgtcgtcga
      241 atatcagctg gccggaggcg acgggacgcc gcgccggtcg atgacagggc tgccggcgat
      301 gcttctggat cgccccgttg cccgctggcg gctggcggcg acggatgggc agggggggca
      361 gggcgcgtgg accgcatgga tccggacggc gccgccgccg cgctgatgcc gcctccggcc
      421 gttgcaccgg ttccccgccg gccttcgacg aatcctcggc acaaggggcc ggatcggggt
      481 gacgaatcgt catcatccgc gtttctgggc cgccccggtc agcagccttc cagccgcgac
      541 atcagcgcca gcagcgtctg acggttgacc ggcttttgta tccgggcaag cgccttgggc
      601 gtgcagtcgc cgcggatcag ggccttccgc aacggcatcc actgcgaggg actgtccggc
      661 agacccggcg cggccgccag cgccgcgtcg accgcatccg ggctgcggcc cgtcgcggaa
      721 gcggcctcgg cggttgtcgg ggcttcgccg gtggccggcg gggcagcgga tcgggccggc
      781 ggcgattggg ctgccccagc agcggcggtc tgcgcccgta tccggttcag cccggcctgc
      841 agggaatcgc ggctttcggt cagggtcgcg acctcctcgc gcagcgttcc ggcccgggcc
      901 tgcagatccg ccagcgcgga ttcctgcgag gcgatccgcc cggtcagttc cgccgcccgc
      961 gcctgctgcc gctgcaactg atcgcgccgg ccggtcaggg ccttgatttc ggcggtcagg
     1021 gtgtcgcgtt gccgcgcaag ctgcgcccga tcctcggtca gcttggtggc ggcctgcccg
     1081 gccgcagcgg cgccggcctg caacgcatcg cgctgctgga cgagagccgc gacctcgtcg
     1141 cgcagcgtcg ccgccctggt ccttgcggtc tcgatttcgg caagcacctg ttcgcgatcg
     1201 gcgccggcct tctcgatgcg cgccagatcc cgtttcgcct gttcgtgccg ttccgccagg
     1261 gcctcgatcc gggcatcaag cgtgacggcc gttccgcgca atccagccag cttttccccg
     1321 gccgcggtat tttcggcgcg ccgcgtgtct cgctgagcgg tcagggcggc aagttcgtca
     1381 cgcgcctgcg ccgccttgcc gtccagcgcc gccagttcct gttcggccgc ctcggcctgc
     1441 cggttcagat cgtccaggcg cgcccgtgcc tgggccacct tggtttccag ctgccgggcc
     1501 tcgtcttcca tggtcacgat gatctggcgc agggcctgtg ccctctgtgc cggatcctga
     1561 tcctgcgcga tcaccgatcg cggagcggtc gccaaggcga tgccgatcac gagaaccgga
     1621 aaactcgaac acctgaaacg gaacaagaca cttacctctt cgatctgcaa atcatgcgga
     1681 atggcgttgt tgtgtcaaca cgttcatggc gcggcgcgga caagtcctgg tggggcggct
     1741 ttgcccgaaa ccggccgccg ccggcatctt tatcaggcaa acctatcgcg aagatcaaaa
     1801 tttgcgattc ttccgtatgg cacgattttg ttagcatcgg tgccgaaaag cgggggcgcg
     1861 atcggcgcgc atcccaaaga ttccaggagg cgatcatgga tggaaaagac atggaaagcg
     1921 gcggctgccc ggtgatgcac ggcggcagcg ccctcaacac ctttttcggc ggacggtcca
     1981 atcgtgagtg gtggccgaac cagctgaacc tgaagatcct gcaccagaac acgccgctgg
     2041 gcaatccgat gggcggggat ttcgactaca aggccgaatt ccagaagctg gacatcgacg
     2101 cggtgaagaa cgatctgttc gcactgatga ccgacagcaa ggattggtgg cctgcggatt
     2161 acggccatta cggtcccttc ttcatccgca tggcatggca cagcgccggc acctatcgtt
     2221 ccggcgacgg acggggcgga tcgtcgtcag gctcgcagcg tttcgcgccg ctgaattcct
     2281 ggcccgacaa cgccaatctg gacaaggcgc ggcgcctgtt gtggccggtg aaacagaaat
     2341 acggcgacgc gctgtcctgg gccgacctgc tgattctggc gggcaattgc gccatcgaat
     2401 cgatgggcgg caaggtcttc ggcttcggcg gcggccgcga ggacatctgg gaacccgagg
     2461 aagacatcta ctggg
//
LOCUS       DTVW01000111            1823 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1161145, whole
            genome shotgun sequence.
ACCESSION   DTVW01000111 DTVW01000000
VERSION     DTVW01000111.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1823)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1823)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1823
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1161145"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..198)
                     /locus_tag="EYO87_01445"
     CDS             complement(<1..198)
                     /locus_tag="EYO87_01445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010392040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase TruB"
                     /protein_id="HIC64668.1"
                     /translation="MARKKGRDVSGWLIVDKPAGVTSTSVVNKVRWALDARKAGHAGT
                     LDPDATGVLAVALGEATKTVAI"
     gene            complement(253..1011)
                     /locus_tag="EYO87_01450"
     CDS             complement(253..1011)
                     /locus_tag="EYO87_01450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011749075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64669.1"
                     /translation="MLIELQRQLGVAVGMVFAMGLPAASDGCTRMDQDGQTYVVCQID
                     AARESDLRLWQNDADGRPLNSFNNVRKSLPQGQSLSFAMNAGMFHPDYRPVGLLVIDG
                     QELHPITTQAGGGNFGMLPNGVFCSGGKRPFQVIESRSFADEAPECRLATQSGPMLVI
                     DGKLHPRFLVDSESRNIRNGVGVSADGRTAWFAISENPVTFYEFGQMFRDGLGARNAL
                     YLDGSISRLYAPGLGRADFGRSMGPMIGLVNGSG"
     gene            complement(1001..1417)
                     /gene="rbfA"
                     /locus_tag="EYO87_01455"
     CDS             complement(1001..1417)
                     /gene="rbfA"
                     /locus_tag="EYO87_01455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008331891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosome-binding factor RbfA"
                     /protein_id="HIC64670.1"
                     /translation="MAQNRFPQGQGPSQRQLRVGELIRRTLSDVLLRGDVHDPDLNRH
                     SITVGEVRTSPDLKVATAYVLPLGGRDADGALEALRRNAPELRHLVARAMTLKYAPRL
                     RFQLDETFDRMDDTRRLFAEERVRRDVEAPDDRDAD"
     gene            1491..>1823
                     /locus_tag="EYO87_01460"
     CDS             1491..>1823
                     /locus_tag="EYO87_01460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008562694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate reductase"
                     /protein_id="HIC64671.1"
                     /translation="MSDFEQTGTGDAPGIVVTGASGRMGRMLIRLLLDSDQARLVGAL
                     ERPGHDWIGRDIGEAMGGQPAGVMVSDDAVTVIARAQAVIDFTAPSATLGFAELAAQA
                     RAVHVIGTT"
BASE COUNT          314 a          623 c          594 g          292 t
ORIGIN      
        1 aattgccacg gtcttcgtgg cctcgcccag ggcaacggcc agaacaccgg tcgcgtccgg
       61 atccagcgtt ccggcatggc ccgcctttcg ggcgtccagc gcccagcgga ccttgttcac
      121 gaccgaggtc gaggtcacgc ccgcgggctt gtccacgatc agccagcccg acacgtcgcg
      181 acccttcttg cgtgccatcg gttcaccccc ggtttgccaa ggcgcgcggg atagccgcag
      241 cgccgccgcc ggtcaacccg agccgttgac cagcccgatc atcggcccca tgctgcggcc
      301 gaaatcggcc cgccccaggc ccggcgcgta gagcctgctg atggagccgt ccagatacag
      361 cgcgttccgc gcgcccagcc cgtcacggaa catctgaccg aactcgtaga acgtcaccgg
      421 attttccgag atcgcgaacc aggcggtccg cccgtcagcc gagacgccga cgccgttgcg
      481 gatattgcgg ctttcggaat cgaccagaaa gcgcggatgc agcttgccgt cgatcaccag
      541 catgggcccc gattgcgtgg ccagccggca ttcgggcgcc tcatcggcga agctgcggct
      601 ttcgatcacc tgaaagggcc gctttccgcc gctgcaaaag acaccattcg gcaacattcc
      661 gaaattgccg ccgcccgcct gtgtggtgat cggatgcagt tcctggccgt cgatcaccag
      721 caggcccaca gggcggtaat cgggatggaa catgcccgca ttcatcgcaa aggacaggct
      781 ttggccctgg ggcaggctct tgcggacatt gttgaagctg ttcaggggcc gcccgtcggc
      841 atcgttctgc cacaatcgca gatcggattc ccgggcggcg tcgatctggc agacgacata
      901 ggtctgtccg tcctgatcca tgcgcgtgca accgtccgaa gcggcgggca gtcccatcgc
      961 gaacaccatt ccgaccgcaa cgccaagctg gcgttgcagt tcaatcagca tcgcgatcat
     1021 caggtgcctc gacatcgcgg cggacccgtt cttccgcgaa caaccggcgg gtatcgtcca
     1081 tgcgatcaaa ggtctcgtcc agctggaacc gcagtcgagg cgcgtatttc agcgtcatcg
     1141 ccctggccac caggtgccgc aattccggcg cgttgcggcg cagggcctcc agcgcgccat
     1201 cggcgtcgcg accgcccaga ggcagcacat aggccgtagc caccttcaga tcgggcgagg
     1261 tccgcacctc gcccacggtg atcgaatggc ggttcaggtc aggatcgtgc acatcgccgc
     1321 gcagcagcac gtccgacaat gtgcggcgaa tcagctcgcc cacgcgaagc tggcgttgcg
     1381 acgggccctg gccctgggga aaacggttct gtgccatccg ccccgatgta gggggtcgcg
     1441 ggtcgcgccg caacgggata tgacacggca aaaggacggg aggccatggg atgagcgatt
     1501 tcgaacagac cggaaccggc gacgcgcccg gcatcgtggt gaccggtgcc tcgggacgga
     1561 tgggccggat gctgatccgg ctgctgctgg acagcgatca ggcacggctg gtcggcgcgc
     1621 tggagcgtcc gggccatgac tggatcgggc gcgacattgg cgaggcgatg ggcgggcagc
     1681 cggccggggt gatggtcagc gacgatgccg tcaccgtcat cgcccgcgcc caggcggtga
     1741 tcgacttcac cgcgccttcc gcgaccctcg gcttcgccga actggccgcg caggcccgcg
     1801 cggttcacgt gatcggaacg acg
//
LOCUS       DTVW01000112            1923 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1162692, whole
            genome shotgun sequence.
ACCESSION   DTVW01000112 DTVW01000000
VERSION     DTVW01000112.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1923)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1923)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1923
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1162692"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..729
                     /gene="cobA"
                     /locus_tag="EYO87_01465"
     CDS             <1..729
                     /gene="cobA"
                     /locus_tag="EYO87_01465"
                     /EC_number="2.1.1.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_769913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III C-methyltransferase"
                     /protein_id="HIC64672.1"
                     /translation="SAGPGDPELLTLKAARRLSEADVVLFDDLASGPVLDHADPAAQM
                     ISVGKRAGRPSARQEHVNALLVEHARRNRRVVRLKSGDAGIFGRLEEEIVALTEAGIP
                     FEIVPGVTSAAAAAAAASIPLTRRLTARRLQFVTGADVTGHLPQDINWAALADPQVTT
                     VVFMGQRSFPELAKGLRVHGLPGTTPALFAEAVGHPEQRLLRTDIDSLARIMARTRVT
                     QPGLILYGPLAFGRPAANAPSPRT"
     gene            860..>1923
                     /locus_tag="EYO87_01470"
     CDS             860..>1923
                     /locus_tag="EYO87_01470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64673.1"
                     /translation="MLTYSHVVTTGTADNAFLSNLTDLAIVWFGGRLVLVSSNTFQGG
                     IASFATDGSGTPLTRIDSIAFGDKFSYQGNPEISVLALAQGPQLHLGQLGGAADLGIA
                     VAANGDLGSFRTILGGSGPGAAISAIGTFETEAGRFLYSANARTLTLETRRIGDDGSL
                     LDTSSAGIPISSAPPDAALDKIIGLTVQGQRMLVAISGLGNFISTHLVGEDGVLDGGK
                     VHASAQGTGYYIPTDIEAVQFGGKSFLIVAGGTSSSLSVFQLSSTGEVTAVDHVIDER
                     TTRFQSATAMATAVVDGRAYVFAGGADDGISVFTVLPDGRLLHLATIEDTDALTLADV
                     SDIEAQVMGGKIALFVASGT"
BASE COUNT          307 a          630 c          652 g          334 t
ORIGIN      
        1 tcggccgggc cgggcgatcc cgaactgctg acgctgaagg ccgcgcggcg actgtccgag
       61 gccgatgtgg tcctgttcga cgatctcgcc tcggggccgg tgctggacca cgccgatccg
      121 gcggcgcaga tgatctcggt cggcaagcgg gcagggcggc cttcggcgcg gcaggaacac
      181 gtgaacgcgc tgctggtcga acatgcgcgc cggaaccgcc gcgtggttcg gttgaaatcg
      241 ggggatgcgg gaattttcgg gcggctcgag gaagagatcg tggccctgac cgaggccggt
      301 atcccgttcg agatcgtgcc cggcgtgacc tcggccgcgg ccgccgcagc cgccgcgtcg
      361 attccgctga cccgccgcct gaccgcccgg cgcctgcaat tcgtgaccgg tgccgacgtg
      421 accggccatc tgccgcagga catcaactgg gcagccctgg ccgatccgca ggtcaccacc
      481 gtcgtcttca tgggtcagcg cagtttcccg gaactggcga aaggtctgcg cgtgcacggc
      541 ctgcccggca ccaccccggc gctgttcgcc gaggcggtcg gccatcccga acagcggctg
      601 ctgcgcaccg acattgacag cctggcccgg atcatggccc ggacgcgggt gacgcagccg
      661 ggtctgatcc tttatggtcc gctggcgttc ggtcggcctg ctgcgaatgc gccgtcaccc
      721 cgaacctgac ccgctcaccc cgcggcatcg ggttgcataa aatgcaaatc agatccggat
      781 ggcgcggcgg cgcggtttaa ggccctgtta aatcgcctga cctagccttc tccgacggcc
      841 caactcagcc ggttgaacca tgctcaccta tagccacgtg gtcacgacgg ggaccgcgga
      901 caacgccttt ctgtccaacc tcaccgatct ggcgattgtc tggttcggcg gacggctggt
      961 gcttgtcagc agcaacacgt tccagggcgg gatcgccagt tttgcgaccg acggatcggg
     1021 cacgccgctg acacgcatcg acagcatcgc gttcggcgac aaattcagct atcagggcaa
     1081 tcccgaaatc agcgttctcg ccctggccca ggggccacaa ctgcatctgg ggcagttggg
     1141 cggggccgcg gatctgggaa tcgccgtcgc cgcgaacggc gatctgggca gtttccgcac
     1201 gatcctgggc gggtccggac cgggcgccgc gatcagcgcg atcggcacgt tcgagaccga
     1261 ggcggggcga tttctctatt cggccaatgc gcggacattg acgctggaaa cgcgtcgcat
     1321 cggcgatgac ggaagtcttc tggatacgtc atcggccggc atcccgatca gcagcgcccc
     1381 gccggacgcg gcgctggaca agatcatcgg cctgacggtc cagggccagc ggatgctggt
     1441 cgcgatctcg ggcctgggca atttcatctc gacccacctg gtgggcgagg acggcgttct
     1501 ggatggtggc aaggttcatg cctcggcgca gggaaccggc tattacatcc cgaccgacat
     1561 cgaggcggtc cagttcggcg gcaaatcctt tctgatcgtc gcgggcggaa cctcgtcctc
     1621 gctgtcggtc ttccagcttt cctcgaccgg cgaggtgacg gcggtcgatc acgtcatcga
     1681 tgaaaggacg acgcgctttc agtccgcgac cgcgatggcg acggccgtgg tggatgggcg
     1741 cgcctatgtc tttgccggcg gcgccgatga cgggatcagc gtcttcacgg tcctgccgga
     1801 tggacggctt ctgcatctgg ccacgatcga ggatacggac gcgctgaccc ttgccgatgt
     1861 cagcgatatc gaggcgcagg tgatgggcgg caagatcgcg ctgttcgtcg ccagcggcac
     1921 cga
//
LOCUS       DTVW01000113            1332 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1163335, whole
            genome shotgun sequence.
ACCESSION   DTVW01000113 DTVW01000000
VERSION     DTVW01000113.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1332)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1332)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1332
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1163335"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..638)
                     /locus_tag="EYO87_01475"
     CDS             complement(<1..638)
                     /locus_tag="EYO87_01475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64674.1"
                     /translation="MERLIDLGNGFWNLRGDLRLFGLLNVGTQASLVRLRSGRFVALD
                     SCAMDMPTRDRVMALTDGGAAVEAILNLHPFHTLHCATMAQMFPQARLYGSRRHWRKW
                     PDLPWQDQPVESADLAARLAGELDFSLPEGIDYICADQRVHAGSLLAFHPASGTVHVD
                     DTLNVLPLPEWLRRTMGLPRLTFHPTLLRALQDRPGAADDFRRWARGIGADWA"
     gene            complement(641..>1332)
                     /locus_tag="EYO87_01480"
     CDS             complement(641..>1332)
                     /locus_tag="EYO87_01480"
                     /inference="COORDINATES: protein motif:HMM:PF02852.20"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HIC64675.1"
                     /translation="DEAIHLRWSGDHDGEADFDHVLLATGRPPALAGLDLDRAGLALD
                     DDGVPVFDRNTMQCGDGPVFIAGDVNADVAILHEAAAEGGIAGSNAAAFPSVGPVRRN
                     HGFMLIFTEPPTATIGAGPDQAGLSGLSDYADQGRARVEARAEGVVRINADVRGKLIG
                     ADLCAPGGEHLAHLLAWAIEAGNPAQALLGNPFYHPTLEEGMRPALRQICKAARIDVP
                     FSRDPGDPPGR"
BASE COUNT          232 a          462 c          443 g          195 t
ORIGIN      
        1 gcccagtcgg cgccgatgcc gcgggcccag cggcgaaaat cgtccgcggc accggggcgg
       61 tcctgcaagg cccgaagcag ggtcggatga aaggtcaggc gcggcaggcc catggtccgg
      121 cgcagccatt cgggcagcgg cagcacgttc agcgtatcat cgacatgaac cgtgccgctg
      181 gcgggatgga aggccagcag cgatccggca tggacgcgct gatccgcaca gatatagtcg
      241 atcccctcgg gcaacgagaa atccagctcg ccggcaaggc gtgccgcaag atcggcgctt
      301 tcgaccggct ggtcctgcca gggcagatcg ggccatttgc gccaatgacg ccgggatccg
      361 taaagccgcg cttgcggaaa catctgcgcc atcgtggcac agtgcagcgt gtggaaggga
      421 tgcaggttca ggatcgcctc gaccgccgcg ccgccatcgg tcagggccat caccctgtcg
      481 cgggtcggca tgtccatggc acaggaatcc agcgccacga agcgccccga gcgcagccgc
      541 accagagagg cctgggtgcc cacgttgagc aggccgaaca gccgcaaatc gccgcgaagg
      601 ttccagaagc cattgcccag atcgatcagc cgttccattg tcagcgcccc ggcggatcgc
      661 cgggatcgcg gctgaacggc acgtcgatcc gggccgcctt gcatatctgg cgcagcgccg
      721 gtcgcatccc ttcttccaga gtcgggtgat agaaggggtt tcccagcagg gcttgcgccg
      781 ggtttcccgc ttcgatcgcc catgccagca gatgcgccag atgttcgccc cccggcgcgc
      841 acagatccgc gccgatcagc ttgccccgga catcggcatt gatccgcacg acgccctcgg
      901 cccgcgcctc gacgcgggcg cggccctgat cggcataatc cgaaaggccc gacaatccgg
      961 cctgatcggg acccgcgccg atggtggcgg tgggtggttc ggtgaagatc agcatgaagc
     1021 catggtttcg ccgcaccggg ccgaccgagg ggaaggcggc cgcgttgctg cccgcgatgc
     1081 cgccctcggc cgcggcttcg tgcaggatcg cgacatcggc attgacatca cctgcgatga
     1141 agaccggccc gtcgccgcat tgcatcgtgt ttcggtcgaa caccggcaca ccgtcatcgt
     1201 ccagcgccag acccgcccgg tcaaggtcca gcccggccag cgcgggcggg cggcccgtcg
     1261 ccagcaggac gtgatcgaaa tcagcctcgc catcgtgatc gccgctccag cgcagatgga
     1321 tcgcctcgtc gc
//
LOCUS       DTVW01000114            1498 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1163582, whole
            genome shotgun sequence.
ACCESSION   DTVW01000114 DTVW01000000
VERSION     DTVW01000114.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1498)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1498)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1498
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1163582"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..332
                     /locus_tag="EYO87_01485"
     CDS             <1..332
                     /locus_tag="EYO87_01485"
                     /inference="COORDINATES: protein motif:HMM:PF03459.15"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="molybdenum ABC transporter ATP-binding protein"
                     /protein_id="HIC64676.1"
                     /translation="GAVLRLRILAQDVMIALDRPTGISALNVLAGVVRDLTPDDGAML
                     VRLEAGSQTLLARITTRSAQALALHPGKPVHAVLKAVSVAPGSIGSGSDPSISRHAPP
                     ARDSRSV"
     gene            complement(224..1072)
                     /locus_tag="EYO87_01490"
     CDS             complement(224..1072)
                     /locus_tag="EYO87_01490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HIC64677.1"
                     /translation="MTRILHLSDLHFGFHRQSLVEPLLARINRAAADLVVVTGDLTHR
                     GRPGQYGLAADFLSRITAPVLSVPGNHDVPLYNIPVRFLIPWRGYRLAINPDLDPAGV
                     AGRVRVLGLNSVDPFAWQRGVIRDGEIARLTASLDPLAVNIVALHHPLQHMPGVDKEL
                     AARAPQLLRRLEAAGVSMVFSGHLHVWSAANLLDHGHRRILQVQAGTALCARESDRQN
                     EFAVLDIDGDEAVIHRHVAPMAQDDFDSPQTLRLSRAGGAWRLIEGSEPEPILPGATE
                     TAFSTA"
     gene            complement(1069..1470)
                     /locus_tag="EYO87_01495"
     CDS             complement(1069..1470)
                     /locus_tag="EYO87_01495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64678.1"
                     /translation="MQLKARVNGDTRDVTTALVFVARSAYQLDNFGLEGADAIRQGKF
                     ALLIAKALKPMPLIRSALRLAFGFSARNSDFDLIETDEVTIESRKHRMLVAHDGEKTV
                     MASPFRLRVWHDGLQVLLPADGVNKTRDNGG"
BASE COUNT          256 a          498 c          498 g          246 t
ORIGIN      
        1 cgggcgccgt gctgcgcctg cggattctgg cgcaggacgt gatgatcgcg ctggatcgcc
       61 cgacgggcat ctcggcgctg aacgtgctgg cgggcgtggt ccgcgacctg acccccgatg
      121 atggcgccat gctggtgcgg ctggaggcag gatcccagac gctgctggcg cggatcacga
      181 cacgatcggc ccaggcgctg gcgctgcatc cgggcaagcc ggttcacgcg gtgctgaagg
      241 cggtttccgt cgcgccgggc agtatcggct cgggttcgga tccttcgatc agccgccatg
      301 cgccgccggc gcgcgacagc cgcagcgtct gaggcgagtc gaaatcgtcc tgcgccatgg
      361 gcgcgacatg gcggtggatc accgcctcgt cgccgtcgat gtccagcacc gcgaattcgt
      421 tctgcctgtc gctttcgcgc gcgcacagcg ccgtgcccgc ctgcacctga agaatgcgcc
      481 gatggccgtg atccagcagg ttcgcggcgc tccagacgtg cagatggccg ctgaaaacca
      541 tgctgacgcc cgccgcttcc aggcgtcgca gcaattgcgg ggcgcgggcg gccagttcct
      601 tgtccacacc cggcatgtgc tgcaacggat gatgcagcgc gacgatgttc accgccagcg
      661 gatcaaggct ggcggtcagt cgggcgatct ctccatcgcg gatcacgccg cgctgccagg
      721 caaagggatc gacgctgttc aggcccagca cgcggaccct gcccgcaacg ccggccggat
      781 caagatcggg gttgatcgcc agccggtagc cgcgccaggg gatcaggaaa cgcaccggga
      841 tattgtagag cggcacgtca tggtttcccg gcacgctcag caccggcgcg gtgatacgcg
      901 acaggaaatc ggcggccagc ccgtattgac cgggacgtcc acgatgggtc agatcaccgg
      961 tgacgacgac cagatccgca gccgcccggt tgatccgcgc cagcagcggt tcgacaagag
     1021 actgacggtg aaacccgaaa tgcagatccg acagatgcag gatccgggtc atccgccgtt
     1081 gtcccttgtc ttgttgaccc cgtccgccgg caacagcacc tgcaaaccgt catgccagac
     1141 ccgcaggcgg aacggactgg ccatcaccgt cttttcgccg tcatgggcga ccagcatcct
     1201 gtgcttgcgc gattcgatcg tgacctcatc ggtctcgatc aggtcgaaat cgctgtttcg
     1261 ggcggaaaac ccgaaggcca gccgcaacgc agagcggatc agcggcattg gcttcagcgc
     1321 cttcgcgatc agcaatgcga acttgccctg ccggatcgcg tctgcgcctt ccagcccgaa
     1381 attgtccagc tgataggcgc tgcgggcgac gaagaccagc gcggtcgtga catcgcgcgt
     1441 atcgccgttc acgcgggctt tcaattgcat cgggtggcgc aggcggcgca gggcgacc
//
LOCUS       DTVW01000115            2423 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1164016, whole
            genome shotgun sequence.
ACCESSION   DTVW01000115 DTVW01000000
VERSION     DTVW01000115.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2423)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2423)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2423
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1164016"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(520..1752)
                     /locus_tag="EYO87_01500"
     CDS             complement(520..1752)
                     /locus_tag="EYO87_01500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007256306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HIC64679.1"
                     /translation="MWMTFLDQLLRQAVRQGTLIVHPPTGSPSRYGDGTGQPVTVRIN
                     DPSLPRRIMLNPDLGIGEGYMDGTFTIDGDDLHGFLRLAILNSANAWKHPLHRMLWKL
                     RYLARVTRQYNPARRARARVAHHYDLSGELYDLFLDADKQYSCAYFHSETDTLEQAQA
                     QKKAHIAKKLLIEPGMNVLDIGCGWGGLGLTLARDHGARVLGVTLSEEQHRVANERAR
                     AAGLSDRARFQLMDYREVEGRFDRVVSVGMFEHVGSPHYRAYFRTVHDKLLPDGIALI
                     HTIGRTLPPGANSPWIEKYIFPGGYIPALSEMMAAAEKADLMSQDIEVWRMHYALTLR
                     HWHDRFMSNIDRVRDLYDDRFCRMWRYYLAACEQTFRHNRQVVFQVQLARKVDAVPIT
                     RDYLYAAPRMQQRDMAAE"
     gene            2281..>2423
                     /locus_tag="EYO87_01505"
     CDS             2281..>2423
                     /locus_tag="EYO87_01505"
                     /inference="COORDINATES: protein motif:HMM:PF14342.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64680.1"
                     /translation="MTAMIVLRLVGVTFWQEFWIEYAVGFAFGWLIFQLWAFLLQDNG
                     LVAA"
BASE COUNT          416 a          740 c          765 g          502 t
ORIGIN      
        1 cgatgccggt gccatgcgtc agccaggccg cgaccagcag gcctgaaaag atcgccgttg
       61 aggcgaccag atacgtcact cgtgttgcca ttccatcgtc cccctccgcg ggcgggcttg
      121 tgcgctgccg cgaattcacg tctgtttcat ggtcgaaggt cggtctgacc agacgcttgc
      181 caccgcttga tcgtcatcgt tccttccttg accgccggat cgtcgcgccg gcttcaggta
      241 aggacgcttg gccgcgcgat ccattactga tcccgttgat cctgggcgaa ttctggcagc
      301 cgcttcgcgc gaagaccggc ggcacacggc agccgcgttt ttctggccgg tcgatccggg
      361 gcccgcagcg gcaggggctt catgccgcct gccagtgcgc tggtttcccc atccgggtca
      421 tgcgcggggc tggaaatcac atctagggat tgcgtcggat cggcgcagga tctggtccgg
      481 acccttcggc cgaccggcgc gatccgggaa tcgttggcgc tactcggccg ccatgtcgcg
      541 ttgttgcatc cggggcgcgg cgtagagata gtcccgcgtg atcggcacgg cgtctacctt
      601 gcgggcaagc tgcacctgga acacgacctg cctgttgtgg cggaaggtct gttcgcatgc
      661 cgcaagatag tatcgccaca tgcggcagaa ccggtcgtca tagaggtcgc gaacacggtc
      721 gatgtttgac atgaaacggt cgtgccaatg gcgcagggta agggcgtagt gcatcctcca
      781 gacctcgatg tcctgagaca tcagatcggc cttttccgcc gctgccatca tttccgacaa
      841 tgccgggata tagccgcccg ggaagatgta tttctcgatc cagggtgaat tggcgccggg
      901 gggcaacgtg cggccgatgg tatggatcag ggcgatgcca tcgggcagca gcttgtcgtg
      961 aacggtgcga aaatacgcgc ggtaatgcgg gcttccgaca tgttcgaaca tgccgacaga
     1021 gacgacgcgg tcgaacctgc cctcgacctc gcgataatcc atcagctgaa acctcgcccg
     1081 gtcggacaac ccggcggcgc gggcgcgttc attggcaacg cggtgctgtt cttcgctgag
     1141 cgtgacgcca agcacccggg cgccgtgatc acgtgcgagg gtcagcccca ggccgcccca
     1201 gccgcacccg atgtccagca cgttcatgcc cggctcgatc agcagttttt tggcgatatg
     1261 cgcctttttc tgcgcctgcg cctgctccag cgtgtccgtt tccgaatgga aataggcgca
     1321 actgtactgc ttgtcggcgt cgagaaagag atcgtagagt tcgcccgaca gatcataatg
     1381 gtgcgccacg cgtgcgcgcg cgcgtcttgc cgggttatat tgacgggtca cacgcgccag
     1441 ataacgcaat ttccacaaca tgcgatgaag gggatgcttc cacgcattcg cgctgttgag
     1501 aatggcgagc cgcagaaatc cgtgaagatc gtcgccatcg atcgtgaagg tgccgtccat
     1561 gtagccttct ccgatcccca gatccgggtt cagcatgatg cggcggggca agcttggatc
     1621 gtttatccgg accgtcaccg gctggcccgt gccgtccccg taacggctgg gtgatcccgt
     1681 gggcgggtgg acaatcaggg ttccctgccg caccgcctgt ctcagcaatt ggtcaagaaa
     1741 tgtcatccac atcaggattt acccatgcag cagcatatcc ggggtcggcg ccgttattcg
     1801 aacggtgccg tcccctgaac gttttgtaaa ggcgggatgt tccccgcatc ctgccgaaaa
     1861 gtcgcccgga ctgcggaacc tgaaagcggc cggatggttc aacccacagg tgcctgcgcc
     1921 gcgcgggccg gaatgttgga ctgcccggag ggcccgcagt ggcgtttcct ggatttcttg
     1981 cagagccgtg gttcgtcctg tcctgggatg ggttcggcat ggccgcggcg gcctgggcgc
     2041 tttacgacat gctggccgtc aataccgcgg tcaatccgcc gctcaaggcc gcttggccga
     2101 tcatcatctt cttcttctcg atcctgggcc tggcgcttta ctggctgacc tgccgaccgt
     2161 cgggcatcgc cgagatggac gagaaggaag cagacggtcc atcacgattg tgtaaacaat
     2221 acgttctaca agaccaacgg cgcgctgatc cactgcgtcg gcggcgacgg gctggggatc
     2281 atgaccgcca tgatcgtgct gcgtctggtc ggcgtgacct tctggcagga attctggatc
     2341 gaatatgccg tgggcttcgc gttcggctgg ctgatcttcc agctctgggc cttcctgctg
     2401 caggataacg gtcttgtcgc ggc
//
LOCUS       DTVW01000116            1158 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1164469, whole
            genome shotgun sequence.
ACCESSION   DTVW01000116 DTVW01000000
VERSION     DTVW01000116.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1158)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1158)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1158
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1164469"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(80..244)
                     /locus_tag="EYO87_01510"
                     /pseudo
     CDS             complement(80..244)
                     /locus_tag="EYO87_01510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748058.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
     gene            359..>1158
                     /locus_tag="EYO87_01515"
     CDS             359..>1158
                     /locus_tag="EYO87_01515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PHP domain-containing protein"
                     /protein_id="HIC64681.1"
                     /translation="MATKSPRFIHLRTHSEHSLLEGAVPVGKLATLAAEAGMPAVALT
                     DTNAMFAALEFSVKAMEKGIQPIIGCQMTLRLPETLASVSAPVVLLAQNRQGWLNLMA
                     LSSCLYLRTDGSLPHVTLEEVCAHAQGLICLSGGPTGPLGLLIALGQSDKAALLADRL
                     GSAFPTRLYVELQRHPAENGKLPEAEAVSEGGLIELAYAKELPLVATNDVYFPRPEMF
                     EAHDALICIAEGAYVDQSQPRRRLTAQHYFKSQAEMATLFADLPEALS"
BASE COUNT          195 a          384 c          354 g          225 t
ORIGIN      
        1 tgttcgagcc gttgaggttg gaccggcgga tcttgtccgc gatagattct gtccagtaca
       61 tcttggcctg ggcgacggcg tcatcgggct tcaccaggcc gtagatcatc ttgaccaggg
      121 tcgattttcc cgcgccgttc tcgcccagca gcgcgtggat ctggcccgcc tcgaccgcga
      181 aggacacgtc gtcattggcg cgcacaccgg gataggactt tccgacccct tcggcccgga
      241 acaccgccgc ctctgccgtc aaatttgccc ctccggtcaa aatcttcgtc ctgtctagcg
      301 cgcccgcgcc gccttcggca attgcgctgt ttggtcaggc tgcgataacg tcgcgaccat
      361 ggcgacgaaa tccccccgat tcattcatct gcgcacacat tccgagcatt ccctgctgga
      421 aggcgcggtt cccgtaggca aactggccac gcttgccgcc gaagcaggca tgcctgcggt
      481 cgcgctgacc gacaccaacg cgatgttcgc cgcgctggaa ttcagcgtca aggcgatgga
      541 gaagggcatc cagccgatca tcggctgcca gatgacactg cgcctgcccg agaccctggc
      601 aagcgtgtcc gccccggtcg tgctgctggc gcagaaccgg cagggctggc tgaacctgat
      661 ggcgctgtcc tcgtgtctct atctgcgcac ggatggcagc ctgccgcatg tcacgctgga
      721 ggaggtctgc gcccatgccc aggggttgat ctgcctgtcg ggcggaccga cggggccgct
      781 gggtctgttg atcgcgctag gtcagagcga caaggccgca ttgcttgcgg atcgccttgg
      841 ctcggccttt ccgacccgac tctatgtcga attgcagcgc catccggccg agaacggcaa
      901 gttgccggag gccgaggccg tgtcggaagg cggactgatc gagcttgcct atgctaagga
      961 attgccgctg gtcgccacga acgacgtcta tttccccagg cccgaaatgt tcgaggccca
     1021 tgacgcgctg atctgcatcg ccgagggtgc ctatgttgac caaagccagc cgcgccgccg
     1081 cctcaccgcg cagcattact tcaagtcgca agccgagatg gcgacgcttt tcgccgatct
     1141 gcccgaagcg ctgagcaa
//
LOCUS       DTVW01000117            1074 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1165076, whole
            genome shotgun sequence.
ACCESSION   DTVW01000117 DTVW01000000
VERSION     DTVW01000117.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1074)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1074)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1074
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1165076"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(134..925)
                     /locus_tag="EYO87_01520"
     CDS             complement(134..925)
                     /locus_tag="EYO87_01520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64682.1"
                     /translation="MQATADGLERTLTDLWRSILSGDRASEPDFLPDKPPNEWRGVGP
                     HGQGGKGMMGGTPYGRPMAMTDDDLRDGLSLDAYSAPFGPFLPMLPPGLILDLTLQGD
                     VIQSATATRPPCPQPGSDDRPGDAIARLMRVMDMPALALRRTRDGLPPAMGIAMLRRA
                     IPDGLGRARDGTDVRDRLDRWRDKDAPQADDGTRLSDLLPGLEWHEAMIVLNSFQPDR
                     IRAICARSGPEGGDEDDKDGNRDAPAHAPPDHGGHQHHDMTGPAA"
BASE COUNT          161 a          372 c          384 g          157 t
ORIGIN      
        1 cgcagcgggt ccgtcgcggc catgccgacc gggcggccga cgatcagccg cccgatcgcg
       61 gtatccagcg ccgccgcggc ccacaggccg atcaacaaca gtgccagcag ggcgggaaga
      121 ccgacaatca ggctcatgcg gccggtccgg tcatgtcgtg atgctggtgt ccgccgtgat
      181 ccggcggcgc gtgagcaggg gcgtccctgt tcccgtcctt gtcgtcttcg tcaccgccct
      241 ccggccccga ccgcgcgcag atcgcacgga ttcgatccgg ctggaagctg ttgagcacga
      301 tcatcgcctc gtgccattcg aggccgggca gaaggtcgga cagccgggtg ccatcgtcgg
      361 cttgcggcgc gtccttgtcg cgccaccggt ccagccggtc gcgtacgtcg gtgccgtccc
      421 tggcccggcc cagaccgtcc gggatcgcgc gtcgcagcat cgcgatgccc atggctggcg
      481 gcaggccatc gcgggtgcgc cgcagcgcca gggccggcat gtccatcacc cgcatcagtc
      541 gggcgatcgc atctccgggg cgatcgtccg atccgggctg cgggcagggg gggcgggtcg
      601 ccgtggccga ctggatgaca tcgccctgca aagtcagatc gaggatcagg ccgggcggca
      661 gcatgggcag gaaaggaccg aacggcgcgg aataggcatc caggctcagc ccgtcgcgca
      721 gatcgtcgtc ggtcatcgcc atcgggcggc catagggcgt gccgcccatc atgcccttgc
      781 cgccctgacc atgcggaccg acgccgcgcc attcgttcgg gggcttgtca ggcaggaaat
      841 cgggctcgga cgcgcggtcc ccggaaagaa tcgatcgcca gagatcggtc agcgtccgct
      901 ccagcccgtc cgccgttgcc tgcaccgggt cggtccagtc ccctggcggc gtcgcccggt
      961 gccagattgt cgcgcggggg tgcggcaaat ggtcgtggag ccgctgcagg aagggaagaa
     1021 gatcgggcgc gatttcgcca agcacaagca gaatcgccgc ctgccggggc gaac
//
LOCUS       DTVW01000118            2187 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1165614, whole
            genome shotgun sequence.
ACCESSION   DTVW01000118 DTVW01000000
VERSION     DTVW01000118.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2187)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2187)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2187
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1165614"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1083)
                     /locus_tag="EYO87_01525"
     CDS             complement(<1..1083)
                     /locus_tag="EYO87_01525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017997964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ppx/GppA family phosphatase"
                     /protein_id="HIC64683.1"
                     /translation="MNGVRTNTGRQIEPFGKMFDTLPKRALKRVGVVDVGSNSIRLVV
                     FDGAARSPAYFYNEKVMAGLGAEMASTGRLNPAGVERGFAALSRFAALAKGMDIEPLT
                     CVATAAVREAEDGPDFQARIERETGIRMWVIDGEEEARLSAQGVLLGWPGANGLVCDI
                     GGNSMELAELKDGKVGRRATSQLGPFRLQQIKGGKDGLKAHIRSIMADLAQRMGTDHQ
                     RIYLVGGSWRAIARLDMERSDYPMTVLHEYRMTPQAVADTLGWIGANDLNELRGRVGI
                     SSSRMELVPLASQVLSELVETFGPADLAISSYGIREGLLYEHMSDTLRKRDPLIEAAR
                     FTERQMARMPGFGKKLYQFLLPIFGRV"
     gene            complement(1140..>2187)
                     /gene="ppk1"
                     /locus_tag="EYO87_01530"
     CDS             complement(1140..>2187)
                     /gene="ppk1"
                     /locus_tag="EYO87_01530"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017997965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="polyphosphate kinase 1"
                     /protein_id="HIC64684.1"
                     /translation="RDPDVLAIKQTLYRTSRDSPIVDALCEAAEAGKSVTALVELKAR
                     FDEAANIRQSRRLERAGAHVVYGFVNYKTHAKISAIVRREGESLVTYTHYGTGNYHPI
                     TARIYTDLSLFTCDPALGRDATRVFNYLSGYVQPAGLENLAISPIGLKDRLLELIARE
                     AEMARAGRPAAIWCKANSLIEKDMIESLYAASAAGVKISLVVRGICGIRPGISGLSEN
                     IRVKSIVGRYLEHSRIICFGNGFGLPSKKARVFISSADLMDRNLNRRVETLVECVNET
                     VKAQIVSQVMAANMADEAQSWLLQPDGRFVRYLPDGRDDLFNCHRFFMENPSLSGRGT
                     AGARDVPALTHSPD"
BASE COUNT          379 a          734 c          672 g          402 t
ORIGIN      
        1 cacccggccg aagatcggca gcaggaactg atacagcttc ttgccgaagc ccggcatccg
       61 cgccatctgg cgttcggtga agcgggccgc ctcgatcagc ggatcacgct tgcgcagcgt
      121 gtcggacata tgctcgtaga gcagcccttc gcggatgccg tagctgctga tcgccagatc
      181 ggcggggccg aaggtctcga ccagttccga cagcacctgc gaggccagcg gcaccagttc
      241 cattcgcgaa gacgagatcc cgacccggcc gcgcaattcg ttcaaatcgt tcgcgccgat
      301 ccagcccagc gtgtccgcga ccgcctgcgg cgtcatgcga tattcgtgca gcaccgtcat
      361 cggataatcg gaacgttcca tgtccagccg cgcaatggcc cgccaggatc cgccgaccag
      421 atagatccgc tggtgatccg tgcccatccg ttgcgccaga tcggccatga tcgaacggat
      481 gtgggctttc agcccgtcct tgccgccctt gatctgttgc agccggaacg gccccagttg
      541 cgaggtcgcc cgccgtccga ccttgccatc cttcagttct gccagctcca tggaattgcc
      601 gccgatgtcg cagaccagcc cgttcgcgcc gggccagccc agcagcacgc cctgcgcgga
      661 cagacgggct tcttcctcgc cgtcgatgac ccacatcctg atgccggtct cgcgttcgat
      721 tcgcgcctga aagtcgggtc cgtcctcggc ctcgcgcacg gcggcggtgg cgacgcaggt
      781 cagcggctcg atatccatgc ccttggccag cgcggcaaac cggctgagcg cggcaaagcc
      841 acgctcgacg cccgccgggt tcaggcgccc ggtcgaggcc atctcggccc ccagaccggc
      901 catgaccttt tcattgtaga aataggcggg cgaacgcgcg gcgccgtcaa acaccaccag
      961 acggatcgag ttcgaaccga catcgaccac gccgacccgt ttcaacgccc gtttgggaag
     1021 tgtgtcgaac atcttgccga aaggctcgat ctgccggccg gtattggtcc gcacgccgtt
     1081 cattcccagg ccccctgctt gcgcattggc cccgttaatg gcccgtgatg gcgtcccggt
     1141 caatccggcg aatgggtcag cgccggaacg tcgcgcgcgc ccgccgtgcc gcgtcctgaa
     1201 agcgaggggt tttccatgaa gaaccggtgg cagttgaaca gatcatcgcg cccatcgggc
     1261 agatagcgca cgaaacggcc gtcgggttgc agcagccagc tttgcgcctc gtcggccatg
     1321 ttggcggcca tgacctggct gacgatctgc gccttgaccg tctcgttgac gcattcgacc
     1381 agcgtttcga cccgccggtt caggttgcgg tccatcaggt cggccgaact gatgaacacc
     1441 cgcgcctttt tcgacggcag gccaaagccg ttgccgaaac agatgatgcg ggaatgttcc
     1501 agatagcggc cgacaatgga tttcacgcga atattttcag acaagccact gatacctggc
     1561 cttattccgc aaattccgcg tacgacgagg ctgatcttga cccccgccgc gctggccgcg
     1621 tagagagatt cgatcatgtc cttttcgatc agcgaattgg ccttgcacca gatcgcggcg
     1681 ggtcgtccgg cccgggccat ctcggcctcg cgcgcgatca gttccagcag ccggtccttc
     1741 agcccgatgg gcgagatggc aaggttttcc agccccgccg gctgaacata gcccgagaga
     1801 tagttgaaga cccgcgtcgc atcccggccc agggccggat cgcaggtgaa cagcgacaga
     1861 tcggtataga ttcgcgccgt gatcgggtgg tagttgccgg tcccgtaatg ggtataggtg
     1921 accaggcttt cgccctcgcg ccggacgatg gcgctgatct tggcgtgggt cttgtagttc
     1981 acgaagccgt agaccacatg ggcgccggcc cgctccaggc gccgcgactg gcggatattg
     2041 gcggcctcgt cgaagcgggc cttcaattcg accagcgcgg tcacggactt gcccgcctcg
     2101 gcggcctcgc aaagcgcatc gacgatcgga ctgtctcggc tggtgcgata cagggtctgc
     2161 ttgatcgcca gcacgtcagg gtcgcgc
//
LOCUS       DTVW01000119            3598 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1166364, whole
            genome shotgun sequence.
ACCESSION   DTVW01000119 DTVW01000000
VERSION     DTVW01000119.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3598)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3598)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3598
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1166364"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..341
                     /locus_tag="EYO87_01535"
     CDS             <1..341
                     /locus_tag="EYO87_01535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007676410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HIC64685.1"
                     /translation="ARLEGMDATLESAAADLYATPMQTFRHITLPLLMPGVAAGAMLA
                     FVISLDDVVITEFVKSAGQDTLPTYMLGQMRRGVSPEVNAISTMLLAVTVVLLTAFFI
                     INRQFNRRKS"
     gene            338..1363
                     /locus_tag="EYO87_01540"
     CDS             338..1363
                     /locus_tag="EYO87_01540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HIC64686.1"
                     /translation="MTRIALLAIGVSAVALPALAEGKLNLYNWGDYTSPDLIKKFEDQ
                     TGIDVTITDYDSNDTALAKVSAGGHGFDLVVPSANYVPIFVQKGLLAELDHERLKNFG
                     NIDAKWMDVPWDKGRVYSIPWLWGTVGMGVNTETYDGDPNTSAIFLDPPKELVGKVNV
                     APEMSDIIHLTTMYLGGEPCTEDKEMLKKVRDKLVEAKPKWMSMDYGMSDKMGSGDVK
                     ASEYWSGAIMRARMQNPAVVYGYPKEGYPLFMDSIALLADAQNVDEAYQFLDFIMDPE
                     NAAMNSEYAKYPNGIAGSEEFFSDEMKNAPEMVVPEEHLANGRWMPLCSPTARDYMTA
                     IWTELQK"
     gene            complement(1674..2420)
                     /locus_tag="EYO87_01545"
     CDS             complement(1674..2420)
                     /locus_tag="EYO87_01545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005614099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HIC64687.1"
                     /translation="MTTSCKIRISGLSKRFSDNVVLNDINLDLEPGERVAIIGPSGTG
                     KSTLLRCLNFLDRPDAGLLTIGDLSVDATRASRAQILALRRRTGFVFQNYALFANKTA
                     RQNITEGLITVRRLPRRQAEARADEVLSRIGLSEKADSYPSALSGGQQQRVGIGRAMA
                     MDAELLLFDEPTSALDPEWVGEVLDLIRSIADGRQTMLIVTHEMQFAREIADRVVFME
                     NGRIVEQGPPARIFDAPTDDRTRAFLRRVG"
     gene            complement(2417..3091)
                     /locus_tag="EYO87_01550"
     CDS             complement(2417..3091)
                     /locus_tag="EYO87_01550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018303041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HIC64688.1"
                     /translation="MDGLDTGYMIGLFPIILSYVPLTLTMAVTAMAGALVLASAQAII
                     RIFRLPVIDQLVALFISFFRGTPLLVQLFLFYYGLPRVVSALTSIDGVTAAIIGLTLH
                     FSAYMAESIRAAILGVDRSQWEASEAIGMTRGQMLRRIILPQAARIAAPTLMNYFIDI
                     IKSTSLAFTLGVTEMMGAAQKEAAGSFLYLEAFLVVAFIYWGMVEFFSFFQRQLEVRM
                     QKAFVR"
     gene            complement(3091..>3598)
                     /locus_tag="EYO87_01555"
     CDS             complement(3091..>3598)
                     /locus_tag="EYO87_01555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008279987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HIC64689.1"
                     /translation="ANQITITPDREATFAFTQPYVYDGAQIVVKEGNEVGITGPESLS
                     GKSVAVNLGSNFEALLRDLPNAADIDIRTYDSNIEQDVALGRMDAFVMDRVSTGQVIA
                     KSPLPLEMAGQSFSEIRNALPFRKDEAGLALRDRIDAALTTLKENGTLADISRKWLDA
                     DVTSPADE"
BASE COUNT          708 a         1102 c         1109 g          679 t
ORIGIN      
        1 cggcccggct ggaggggatg gacgccacgc tggaatcggc cgcggccgat ctttacgcga
       61 cgccgatgca gacctttcgc cacattaccc tgccgctgct gatgccgggc gtcgccgccg
      121 gcgcgatgct ggcctttgtc atcagcctgg acgacgtcgt catcaccgag ttcgtgaaat
      181 ctgccggcca ggacacgctg ccgacctata tgctgggcca gatgcggcgc ggcgtctcgc
      241 ccgaggtgaa cgcgatatcg accatgctgc tggcggtcac ggtcgtcctg ctgaccgcat
      301 tcttcatcat caaccgacag ttcaacagga gaaaatcatg acaagaatcg ccctcctcgc
      361 catcggggtt tctgccgttg cgctgcccgc gctggcagaa ggaaaactga atctctacaa
      421 ttggggcgac tataccagtc ccgacctcat caagaaattc gaggatcaga ccggcatcga
      481 cgtcaccatc accgattacg acagcaacga caccgccttg gccaaggtca gcgccggggg
      541 gcatggcttc gatctggtcg tgccttcggc gaactatgtt ccgatcttcg tgcaaaaggg
      601 gctgctggcc gaactggatc acgagcggct gaagaatttc ggcaatatcg atgccaagtg
      661 gatggatgtc ccctgggata agggccgcgt ctattcgatc ccctggctgt ggggcacggt
      721 cgggatgggc gtgaacacgg aaacctatga cggcgatccg aatacctcgg ccatctttct
      781 cgacccgccc aaggaattgg tgggcaaggt caatgtcgcc ccggaaatgt ccgacatcat
      841 ccatctgacc acgatgtatc tgggcggcga gccctgcacc gaggacaagg agatgctgaa
      901 gaaggtccgc gacaaactgg tcgaagccaa gccgaaatgg atgtcgatgg attacggcat
      961 gtccgacaag atgggcagcg gcgatgtcaa ggcatccgaa tactggtcgg gcgcgatcat
     1021 gcgcgcgcgg atgcaaaatc cggcggtcgt ctacggctat cccaaggaag gctatccgct
     1081 gttcatggat tccatcgcgc tgctggcgga tgcccagaat gtcgatgagg cctatcagtt
     1141 cctcgacttc atcatggatc ccgaaaacgc cgcgatgaat tcggaatacg cgaaataccc
     1201 caacggcatc gcgggctccg aggaattctt cagcgatgag atgaagaacg cccccgagat
     1261 ggtcgtgccc gaggagcatc tggccaatgg ccggtggatg ccgctgtgtt cgccgaccgc
     1321 ccgcgactac atgaccgcca tctggaccga gttgcagaag tgaccgtcgc tgtcccgcca
     1381 tcgcgctgtg gcggcgggac gggcacggag aaccgcgcgg tgaccgtgaa ggctggtcgg
     1441 gccgcgagat ccgggcggcg gcaccgcctt ggacgggatc gtccttgatt ctctgccgcc
     1501 gtcgtggcga tcaagcctcg gtcgatcatc aacctttggc cttcggtggc gatgcaacgc
     1561 cattgaaggc ccgataattc gcctgctgcc gctgggcttg gccggccggt tcttgtcggc
     1621 agacttgcgc gaagcccgta tccgccgcca atattgtccc ggtctttcaa tcttcagccg
     1681 acccgtctta gaaatgcccg cgttcggtcg tccgtgggcg cgtcgaagat tcttgccggc
     1741 ggcccctgct cgacgatccg tccattctcc atgaacacga cccggtctgc gatctcgcgg
     1801 gcgaattgca tctcgtgggt gacgatcagc atggtctggc ggccatccgc gatggatcgg
     1861 atcagatcca gcacctcgcc cacccattca gggtccagcg cgcttgtcgg ctcatcgaaa
     1921 agcagcagtt ccgcatccat cgccatggcg cggccaatgc ccacgcgctg ttgctgcccg
     1981 cccgagaggg cactgggata gctgtcggcc ttttccgaaa gcccgatccg ggacagcacc
     2041 tcgtcggcgc gggcttcggc ctgacggcgc ggcaagcgac gcactgttat cagcccttcg
     2101 gtgatgttct gccgcgcggt cttgttggcg aaaagcgcgt agttctgaaa gacaaagccc
     2161 gtgcgacggc gcaatgcgag gatctgggcg cggctggccc gagtcgcgtc gacggacaga
     2221 tccccgatcg tcagaaggcc cgcatcggga cggtcgagaa agttgaggca gcgaagcaat
     2281 gtcgattttc ccgttcccga tggcccgatg atcgccaccc gctcgcccgg ttccagatcc
     2341 aggttgatgt cgttcaggac gacattgtcg gaaaaccgct tgctcaggcc gctgatcctg
     2401 atcttgcaac tggttgtcat cgcacaaagg ccttctgcat ccggacttca agctggcgct
     2461 ggaagaacga gaagaactcg accatgcccc aatagatgaa cgccacgacc agaaaggcct
     2521 cgaggtaaag aaagctgccg gcggcctcct tttgcgcggc acccatcatc tcggtgacgc
     2581 ccagagtgaa ggcaagagac gtgctcttga tgatgtcgat gaagtaattc atcagcgtcg
     2641 gggccgcgat ccgcgccgcc tggggcagaa tgatgcggcg cagcatctgt ccgcgcgtca
     2701 tgccgatcgc ctcagacgcc tcccactggc tgcgatcgac gccaaggatc gcggcgcgga
     2761 tcgattccgc catataggcc gaaaaatgca gcgtcagacc gatgatcgcg gcggtgacgc
     2821 cgtcgatgct ggtcagcgcc gagacgacgc gcggaagccc gtaatagaac aggaacagct
     2881 ggaccagcag cggcgtgcca cgaaagaagc tgatgaacag cgcgaccagt tggtcgatca
     2941 ccggcaatct gaagatgcgg atgatcgcct gcgccgaggc caggacaagc gccccggcca
     3001 tggctgtcac cgccatggtc agggtcaggg ggacatagct caggatgatc gggaacagcc
     3061 cgatcatgta tcctgtatca agcccgtcca ttactcgtcg gcagggctgg tcacgtcggc
     3121 gtccagccat ttccgcgaaa tgtccgccag cgtgccgttt tccttcagcg tggtcagcgc
     3181 ggcgtcgatc ctgtcacgaa gcgccagacc ggcttcgtcc ttgcggaacg gcagcgcgtt
     3241 cctgatttcg ctgaaggact gcccggccat ttccagcggt agcgggcttt tcgcgatgac
     3301 ctgtccggtc gagacgcggt ccatgacgaa ggcatccatg cggccaagcg ccacgtcctg
     3361 ttcgatattg gaatcgtagg tgcggatgtc gatatcggcg gcattgggca gatcacgcag
     3421 aagcgcctcg aaattcgagc ccagattgac cgcgaccgat tttcccgaca gcgattccgg
     3481 cccggtgatg cccacctcgt tgccctcttt cacgacgatc tgcgcgccgt catagacata
     3541 gggctgggta aaggcaaagg tcgcttcgcg gtccggcgtg atggtgatct ggttggcg
//
LOCUS       DTVW01000120            1146 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1167070, whole
            genome shotgun sequence.
ACCESSION   DTVW01000120 DTVW01000000
VERSION     DTVW01000120.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1146)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1146)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1146
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1167070"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            260..1063
                     /locus_tag="EYO87_01560"
     CDS             260..1063
                     /locus_tag="EYO87_01560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017927586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-formylglutamate amidohydrolase"
                     /protein_id="HIC64690.1"
                     /translation="MASPHSGRDYPEWFLAGTRLPIPVLRSSEDAFMDRLTACASDHG
                     AVTLAAKVPRCIVDLNRGADEIDPLVVRGVPRHPLNQRTLAGLGVIPRVVSQGRTIHD
                     RPIDRAEAERRIAACWRPYHAMLAGLIAEARTTFGQAILIDMHSMPHDALTHLQGPRP
                     DMVLGNRHGLSASARVSDIVAAAFEAEGWRIRRNSPFSGAYICSAYGRPGRNVHVVQI
                     EIDRALYMDEKSLTPLPDFDRFAERLGRVIRKLAVIDDADGTGARIAAE"
BASE COUNT          177 a          389 c          368 g          212 t
ORIGIN      
        1 actacgatgt caacgtagtg ctctaccgct gagctaaccg cccgtgcttc ggcacccagg
       61 cccaaccccc tcgggattcg gcccgaccgc ttcggtccgc gtgtctatat aggcggcttt
      121 cgacggattc aaggcctatt ggcgcaacat tcttcggtct atattggcag gatcaaacag
      181 agcccggaac cagcaattga gcctgtccga tctgcccttc tcgcttgtca ggcccgcacg
      241 ctgggccagc ggcgtcatca tggcctcgcc tcattcgggc cgcgactatc ccgaatggtt
      301 tcttgcgggc accagattac cgattcccgt tctgcgttcg tccgaggatg cgttcatgga
      361 ccgcctgacc gcctgcgcca gcgatcatgg cgcggtgacg ctggcggcca aggtgccgcg
      421 ctgcatcgtc gatctcaatc gcggcgccga cgagatcgat ccgctggtcg tgcgcggcgt
      481 gccccggcac ccgctgaacc agcgcacatt ggccggtctg ggggtgattc cgcgtgtcgt
      541 gtcgcagggc cgcacgatcc acgaccgccc gatcgaccgg gccgaggccg agcgccgcat
      601 cgccgcctgc tggcggccct atcatgccat gctggccggg ctgatcgccg aggcgcggac
      661 gaccttcggg caggcgatcc tgatcgacat gcattccatg ccgcatgacg cgctgaccca
      721 ccttcagggc ccgcggcccg acatggtgct gggaaatcgc cacgggctgt cggcctcggc
      781 ccgcgtctcg gatatcgtcg ccgccgcctt cgaggccgag ggttggcgca tccgccgcaa
      841 ttcccccttc tcgggggcct atatctgctc ggcctatggt cggcccggcc ggaacgtcca
      901 tgtcgtccag atcgagatcg atcgcgcgct gtacatggac gagaagtccc tgacgccgct
      961 gcctgatttc gaccgctttg ccgaaagact gggcagggtg atccgcaagc tggccgtgat
     1021 cgacgacgcg gacggaaccg gcgcgcggat cgcggccgaa tagggggaat ggggatggac
     1081 aatctgccgc aggcgctgag cgatcttccg ggacgcaacc tggcgctgat cgtgctggcg
     1141 ctggtg
//
LOCUS       DTVW01000121            1121 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1169294, whole
            genome shotgun sequence.
ACCESSION   DTVW01000121 DTVW01000000
VERSION     DTVW01000121.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1121)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1121)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1121
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1169294"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(41..697)
                     /locus_tag="EYO87_01565"
     CDS             complement(41..697)
                     /locus_tag="EYO87_01565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005851792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HIC64691.1"
                     /translation="MRRTLQGEGVYDRLCEQIRSGTIRPGARLTETELAARLGVSRTP
                     VREAIRRLEADGLVDHQPRSGAVVRQLAYPEIMELYEMRTVLEGTAARLSARAASPME
                     LEALRSINAEMARAVEDAARLVRLNRQFHARLLDAARNRFLLRAAASVENTLLILGPS
                     AMAAPERARQAVEEHEAVLDALAARDGQRAEAAMREHMERAQLTRLRILRQKDEAERD
                     "
     gene            864..>1121
                     /locus_tag="EYO87_01570"
     CDS             864..>1121
                     /locus_tag="EYO87_01570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010397811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64692.1"
                     /translation="MQKPARIGRPGRMIVTFALALAGAGLFLVLNLPLPWLLGPMLAC
                     LIAALLGAPLRGAGGFSTFMRTFLGVAVGASITPEVLAGLPE"
BASE COUNT          149 a          385 c          389 g          198 t
ORIGIN      
        1 cgcgtcccat gtttcgcctg ccagcgatcg cgaaagaccg tcagtcacgt tccgcctcgt
       61 ctttctgtct caggatgcgc agccgggtca gttgggcgcg ttccatgtgt tcgcgcatcg
      121 cggcctcggc gcgctgtccg tcgcgggcgg caagagcgtc gaggaccgcc tcgtgttctt
      181 cgaccgcctg ccgggcgcgt tccggcgcag ccatcgccga ggggcccagg atcagcagcg
      241 tgttctcgac gctggccgcc gcgcgcagca ggaaccggtt gcgcgccgcg tccagcaacc
      301 gggcgtggaa ttgccggttc aggcgaacca ggcgggcggc atcctcgacc gcgcgggcca
      361 tctcggcgtt gatcgaacgc agcgcctcca gctccatcgg cgaggcggcg cgggccgaaa
      421 gccgcgcggc ggtgccttcc agcaccgtcc gcatctcgta aagctccatg atttcgggat
      481 aggccagctg tcggacgacg gcgccgctgc ggggctggtg atcgaccagg ccgtcggcct
      541 ccagccggcg gatcgcctcg cgcaccgggg tccggctgac gccgaggcgg gcggcaagct
      601 cggtctcggt cagtcgtgcg ccggggcgaa tcgtgcccga ccggatctgt tcgcaaagcc
      661 tgtcatagac gccctcaccc tgcagggtgc gccgcatgcc gtcgcctgat ccggatttcg
      721 gactttcggt catgcatcca gtcgtataca tcaggatgca aaagggtcaa gtccggatgg
      781 gccggatctg ttccaaaggc atcgaagggg ccggtgcgcc ggcttgccgc cccgggcgca
      841 ttctggcaaa ggctttgcac atcatgcaga aacctgcgcg cataggccgg cctggccgga
      901 tgatcgtgac cttcgcgctg gctctggccg gggcggggct gtttctggtc ctgaacctgc
      961 ccctgccctg gttgctgggg ccgatgctgg catgcctgat cgcggcgttg ctgggcgccc
     1021 ccctgcgcgg cgccggcggc ttcagcacct tcatgcggac cttcctgggg gtggcggtcg
     1081 gcgcatccat cacccctgaa gtgctggccg gcctgcccga a
//
LOCUS       DTVW01000122            1548 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1169818, whole
            genome shotgun sequence.
ACCESSION   DTVW01000122 DTVW01000000
VERSION     DTVW01000122.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1548)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1548)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1548
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1169818"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1212
                     /locus_tag="EYO87_01575"
     CDS             <1..1212
                     /locus_tag="EYO87_01575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010393011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase"
                     /protein_id="HIC64693.1"
                     /translation="TEGAEVQIVVNQSPFYAESGGQVGDTGLVRTETGAARVTDTRKV
                     AGVFTHMAQVTLGTIAKGQGAQLSVDRDRRGMIRANHSATHLLHEALRRTLGAHVAQR
                     GSLNAPDRLRFDFSHNHAVTPEEVSKIEAEVNDFIRQNSPVETRIMTPDDARALGAQA
                     LFGEKYGDEVRVVSMGRQGNSGKGTDGQTYSLELCGGTHVLRTGDIGAFALLGDSASS
                     AGVRRIEALTGQAALDHLRAADRQLAEIATLLKAQAGDVVNRVRALADERKALASEVA
                     QLKRQLAMGGGGATEAKEIAGVKFIGRRVEGVGGKELGPLIDEMKAKLGSGAVLVLSE
                     ADGKATVAAGVTPDLTDRLSAVSLVQAATAALGGKGGGGRPDRAQGGAPGLEAAESAF
                     AEVEKLIGATL"
     gene            1209..1514
                     /locus_tag="EYO87_01580"
     CDS             1209..1514
                     /locus_tag="EYO87_01580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1330 domain-containing protein"
                     /protein_id="HIC64694.1"
                     /translation="MSALWIAHVLVTDPEAYRRYAEAAGPAIASHGGVFLARGGRYRQ
                     FEGQDRPRNVVARFPSFEAAVACYESAEYQAALAHAKDASTRELVIVEETSPAADPA"
BASE COUNT          271 a          486 c          555 g          236 t
ORIGIN      
        1 accgagggcg cagaggttca gatcgtcgtg aaccagtcgc ccttctatgc cgaatcgggc
       61 ggtcaggttg gcgataccgg tcttgtcagg accgagacag gcgccgcgcg ggtaaccgac
      121 accaggaagg tcgcgggcgt cttcacgcat atggcccagg tgacgctggg cacgattgcc
      181 aagggtcagg gtgcgcaatt gtcggtcgat cgtgaccggc gcggcatgat ccgcgccaac
      241 cattcggcca cgcatctgct gcacgaggca ttgcgtcgga ccctgggcgc ccatgtcgcg
      301 cagcgcggca gtctgaacgc gcctgaccgg ctgcgcttcg atttcagcca caaccatgcc
      361 gtcacgcccg aggaggtctc gaagatcgag gcggaagtga atgatttcat tcggcagaat
      421 tccccggtcg aaacccggat catgaccccc gacgacgctc gtgccctggg cgcccaggca
      481 ttgttcggcg agaaatatgg cgatgaggtg cgggtggtct cgatgggtcg gcagggcaat
      541 tccggcaagg gcacggatgg ccagacctat tcgctggaac tttgcggagg cacgcatgtc
      601 ctgcgcacgg gcgatatcgg cgccttcgcg ctgctgggcg attccgcttc cagcgccgga
      661 gtgcggcgga tcgaggcgct gacagggcag gcggcgctgg accatctgcg cgcggcagac
      721 cggcaattgg ccgagatcgc gaccctgttg aaagcgcagg cgggcgatgt cgtgaaccgg
      781 gtgcgcgccc tggccgatga gcgcaaggca ctggccagcg aggtcgcgca gttgaagcgg
      841 cagcttgcca tgggcggcgg cggggccacc gaagccaagg aaatcgccgg cgtgaaattc
      901 atcggccgca gggtcgaggg cgtcggcggc aaggagcttg ggcctctgat cgacgagatg
      961 aaagccaagc tgggcagcgg cgcggtgctg gtcctgtcgg aagccgacgg caaggcgacc
     1021 gtggccgccg gcgtgacgcc ggatctgacc gaccgtctca gcgccgtgtc cctggtgcag
     1081 gccgccaccg ccgcgcttgg cggcaagggc ggcggcgggc ggccagatcg cgcccagggt
     1141 ggcgcgccgg gactggaggc cgcagaaagc gcctttgccg aagtcgagaa actgatcggg
     1201 gcgacactat gagcgcgcta tggatcgcac atgtcctcgt gaccgacccc gaggcctatc
     1261 gccgctatgc cgaggccgcc ggaccagcga tcgcatcgca tggcggcgtt tttctggcgc
     1321 ggggcggccg ctaccggcaa ttcgaggggc aggaccggcc gcgcaacgtc gtggcccgct
     1381 ttcccagctt cgaagcggcc gtggcctgct acgaaagcgc cgaatatcaa gccgcgctgg
     1441 cccatgccaa ggatgcgtcc acgcgcgaac tggtcatcgt cgaagagacg tcgcccgctg
     1501 ccgatccggc atgatccctg aaccgcaggg ctaaatccgg tcaggctc
//
LOCUS       DTVW01000123            4756 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1170892, whole
            genome shotgun sequence.
ACCESSION   DTVW01000123 DTVW01000000
VERSION     DTVW01000123.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 4756)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4756)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4756
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1170892"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..498
                     /locus_tag="EYO87_01585"
     CDS             <1..498
                     /locus_tag="EYO87_01585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="A/G-specific adenine glycosylase"
                     /protein_id="HIC64695.1"
                     /translation="RPGDFAQAMMDLGATICTPRSPACGICPLIRDCDAYAAGIASDL
                     PRKSPKASRPARSGIVWIARKGDALLLEERPASGLLGGTLAFPSAGWDGRDLPPPGPA
                     DWSEIGEVRHVFTHFSLTMRVMLGELSGRPERGRLVPLRHIDRKALPGLMRKVWDLAR
                     AEIAA"
     gene            508..1647
                     /locus_tag="EYO87_01590"
     CDS             508..1647
                     /locus_tag="EYO87_01590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020038410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkane 1-monooxygenase"
                     /protein_id="HIC64696.1"
                     /translation="MTPKPVSPLPAAAPFWMSLLMLPLVALAARMGGAWWLLLPLAAW
                     FMTSVMDSVLGLNEGNPDPRAGAERLFWHRAITIIWFPLQFAAIFGAIWYVQNSGHLS
                     GLEKLGLFFGIGVLSGTIGIVYAHELLHQKTALERWMGDLLLASVLYSHFRSEHLLVH
                     HSWVATPRDAVSARYDEGFYGFFLRVLLESPRSAWRAEARLLARARRKPRDRRNPFWR
                     YAALQLGMVALALILGGGVGLLLFVFQAFIAVWQLELTNYVEHYGLTRRHLGAGRYEH
                     IRPRHSWNASHRVTNWLMINLQRHSDHHYRPDRRFPLLQTYGPDEAPQLPMGYPAMNF
                     LAMAPCWWRRKMNPRVHRWRRQFYPDIEDWTAYDQGTLPMPRNAP"
     gene            1607..2671
                     /locus_tag="EYO87_01595"
     CDS             1607..2671
                     /locus_tag="EYO87_01595"
                     /inference="COORDINATES: protein motif:HMM:PF00027.27"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HIC64697.1"
                     /translation="MTRARCRCRATRHSLCRHVFDPKRTRVSASRHFRRISAVFLWWQ
                     IEGAGSQVSVRLFSAPSIRYADQAWPTRPFAPDFSCYGTLCSLVYNPAEHGVASRDIS
                     AIRLRHPPGGSAILARRAAEMLHERRPDLLQGLDGAAFQDFLATCSLHHHPKPHEILR
                     QDEPTDHCYLILQGRVEVSVIDVNGNRVLAHIANPGEVMGEVEIFSGRVCAATCTTWP
                     DTMLAAFSAEKIMACLPAETLLRNFAGIFHDRLTRDNAQQSVAMFYAAEDRIRIHLLS
                     LTAPDRPEALISQNNLALLAGCSRQTVNQTLAHLRGAGIVEITRGTIRVLDRARLQGP
                     RPGSDLTALPQTTVPREDGA"
     gene            complement(2761..3891)
                     /locus_tag="EYO87_01600"
     CDS             complement(2761..3891)
                     /locus_tag="EYO87_01600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009158582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HIC64698.1"
                     /translation="MTKTKESCAAAARPLPLNRILAGDCIEIMNSLPEGSIDLIFADP
                     PYNLQLRGDLHRPDNSKVDAVDDDWDQFAGFAAYDSFTRDWLAAARRLLKPDGAIWVI
                     GSYHNIFRVGAELQNQGFWIMNDVIWRKSNPMPNFRGKRLTNAHETMIWASKSESSKY
                     TFNYEALKSLNEGIQMRSDWVIPICNGGERLKDGKGDKAHPTQKPEALLHRVLIGTTS
                     PGDVVLDPFFGTGTTGAVAKMLGRDFIGIEREAAYREVAEKRLARIRRFDADALATTR
                     AKRAEPRVPFGQVIERGMLRPGEELFSLGSRHKAKVRADGSLIGNDVKGSIHQVGAAL
                     EGAPSCNGWTYWHFKREGKMIPIDLLRQQIRAELAGEVARPN"
     gene            complement(3980..4618)
                     /locus_tag="EYO87_01605"
     CDS             complement(3980..4618)
                     /locus_tag="EYO87_01605"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008281264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="HIC64699.1"
                     /translation="MTGLPDFSHEQAAMSRGARLVAGVDEVGRGPLAGPVTAAAVVVR
                     DPVNIPEGLNDSKKVGRKQREVLADWIMAHCDWSVAHVEVADIERLNIYHAAHLAMVR
                     AVAGLRCRPCRVLVDGNRVPAALDRPAEAIVGGDARSLSIAAASILAKVLRDRIMVDL
                     AQQHPGYGWEVNAGYPTPAHKRALLDLGLTPHHRRSFRPVHNILCKPRSSSP"
     gene            complement(4615..>4756)
                     /locus_tag="EYO87_01610"
     CDS             complement(4615..>4756)
                     /locus_tag="EYO87_01610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010399343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Ureidoglycolate hydrolase"
                     /protein_id="HIC64700.1"
                     /translation="GVNLRAGVWHGVLTPLDRAADFLVVDREGEGVNLEEVRIAPVSI
                     TA"
BASE COUNT          795 a         1558 c         1513 g          890 t
ORIGIN      
        1 aggcccggcg atttcgccca ggcgatgatg gatctgggcg ccacgatctg caccccgcgc
       61 agcccggcct gcggcatctg cccgctgatt cgcgattgcg acgcatacgc ggccggaatc
      121 gcatccgacc tgccacgcaa gtccccgaag gcttccagac ccgcgcgcag cggcatcgtc
      181 tggatcgccc gcaagggcga tgcgctgctg ctggaggaac gccctgcaag cggtctgctg
      241 ggcggcacgc tggcctttcc ctcggccgga tgggacgggc gcgacctgcc gccccccggt
      301 cccgccgact ggtccgagat cggcgaggtg cgacacgtct tcactcattt cagcctgacg
      361 atgcgtgtca tgctgggcga attgtcgggc cggccggaac gcggccggct ggtgccgttg
      421 cgtcacatcg accgaaaggc cctgcccggc ctgatgcgca aggtctggga tctggcgcgg
      481 gcggaaatcg cggcgtaggc ttttgccatg accccgaagc ccgtctcgcc gctgcccgcc
      541 gcggcaccgt tctggatgtc gctgctgatg ctgccgctgg tcgcgcttgc ggccagaatg
      601 ggaggggcgt ggtggctgct gctgccgctt gccgcctggt tcatgacctc ggtcatggac
      661 agcgttctgg gactgaacga aggcaatccc gatccgcggg caggcgccga gcggctgttc
      721 tggcaccgcg cgatcacgat catctggttc ccgctgcaat tcgcggccat tttcggcgcc
      781 atctggtatg tccagaacag cggccacctg tccgggctgg aaaagctggg cctgttcttc
      841 gggatcggcg ttctgtcggg cacgatcggc atcgtctatg cccatgaatt gctgcatcag
      901 aagaccgccc tggaacgctg gatgggcgat ctgctgctgg ccagcgtgct gtattcgcat
      961 ttccgcagcg aacatcttct ggttcaccat tcctgggtgg cgacaccgcg cgatgccgtc
     1021 tcggcccgct atgacgaggg tttctacggc tttttcctgc gggtgctgct ggaaagcccg
     1081 cgcagcgcat ggcgggccga ggcgcggctg ctggcccgcg cccgccgcaa gccccgggac
     1141 cggcgcaacc cgttctggcg ctatgcagcg ctgcaactgg ggatggtcgc gctggcgctg
     1201 attctgggcg gcggggtggg cctcttgctg ttcgtcttcc aggccttcat cgccgtctgg
     1261 cagcttgagc tgacgaatta cgtcgaacat tatggcctga cccgccgtca tctgggcgca
     1321 gggcgttatg aacatatccg gccgcggcac agctggaatg ccagccatag ggtcacgaac
     1381 tggctgatga tcaatctgca gcgtcattcg gaccatcact acaggcccga ccgccggttt
     1441 ccgctgttgc agacctatgg gcccgacgag gcgccgcagc ttccgatggg ctatccggcg
     1501 atgaatttcc tggccatggc accctgttgg tggcggcgga agatgaaccc gcgcgtgcac
     1561 aggtggcggc ggcaattcta tcccgatatc gaggactgga ccgcctatga ccagggcacg
     1621 ctgccgatgc cgcgcaacgc gccatagcct ctgccgtcac gttttcgatc caaaaagaac
     1681 gcgagtgtcg gcaagccgac actttcggcg gatttccgct gtattccttt ggtggcagat
     1741 cgaaggtgca ggttcgcagg tctcggttcg tcttttttca gcaccttcga tccgctacgc
     1801 cgatcaggcg tggccgaccc ggccttttgc gccggatttt tcatgttatg gtacgctgtg
     1861 tagcctggtt tacaacccag cggagcatgg cgtggcatcc cgagacattt ctgcgatcag
     1921 gttgcggcat ccgccgggcg gctctgccat cttggcgcgt cgcgccgccg agatgctgca
     1981 tgaacgccgt cccgatctgc tgcaagggct ggatggtgcg gcattccagg attttctggc
     2041 gacatgcagc ctgcaccatc atccgaaacc ccacgagatt ctgcgtcagg acgagccgac
     2101 ggaccattgc tacctgatcc tgcaggggcg ggtcgaggtc agcgtgatcg acgtcaacgg
     2161 caaccgcgtt ctggcgcata tcgccaatcc gggcgaagtc atgggcgagg tcgagatttt
     2221 ctcgggccgg gtttgcgccg cgacctgcac gacctggccc gacacgatgc tggccgcctt
     2281 cagcgcggaa aagatcatgg cctgcctgcc cgccgaaacg ctgcttcgaa actttgccgg
     2341 catcttccat gaccgcctga cccgcgacaa tgctcagcaa tcggtcgcga tgttctacgc
     2401 cgccgaggac cggattcgca tccatctgct aagcctgacc gcgcccgacc ggcccgaggc
     2461 gctgatcagc cagaacaacc tggcactgct ggcgggatgt tcgcgccaga cggtgaacca
     2521 gacactggcg catctgcgcg gcgcgggcat cgtggagata acccggggca cgattcgcgt
     2581 cctcgaccgg gcccggttgc agggtccgcg ccccggatcg gatttaacgg cattgccgca
     2641 gaccaccgta ccgcgcgaag acggcgcata ggacgaaaag gccccgccat gcggacatgg
     2701 cggggcaagg cggtcccgcc gcgcggcagg cggcggaacg acggcgaacc gtattcggga
     2761 tcaattcggg cgggcgactt ctccggccag ttcggcgcgg atctgctggc gcaagaggtc
     2821 gatcgggatc atcttgccct cgcgcttgaa atgccagtag gtccagccat tacaggacgg
     2881 agcgccctcc agcgcggcgc cgacctgatg gatcgagccc ttgacatcgt tgccgatcag
     2941 gctgccatcg gcgcggacct tggccttgtg ccggctgccc agcgaaaaca gttcctcgcc
     3001 cggacgcagc atcccgcgtt cgatcacctg gccaaagggc acgcgcggct cggcccgttt
     3061 ggcccgcgtc gttgccagcg catcggcgtc gaagcggcgg atccgcgcca gccgcttttc
     3121 tgcgacctcg cgataggcag cctcgcgttc gatgccgatg aagtcgcggc ccagcatctt
     3181 tgccaccgcg ccggtggtgc cggtcccgaa gaacggatcc agcacaacat cgccgggact
     3241 ggtggtgcct atcagcacgc gatgcagcaa ggcctcgggc ttctgggtgg gatgggcctt
     3301 gtcgcccttt ccgtccttca gccgctcgcc gccattgcag atcggaatca cccagtcgct
     3361 gcgcatctgg ataccctcgt tcaacgattt cagcgcctcg tagttgaaag tgtatttcga
     3421 gctttcggat ttcgaggccc agatcatcgt ttcatgcgcg ttggtcagcc gcttgccgcg
     3481 aaagttcggc atcgggttgg acttgcgcca gatcacgtcg ttcatgatcc agaaaccctg
     3541 gttctgcagt tcggcgccga cgcggaagat gttgtgatag gatccgatga cccagatcgc
     3601 gccatcaggc ttcaacaggc gccgcgcagc ggccagccag tcgcgggtaa agctgtcata
     3661 ggccgcgaaa ccggcgaact ggtcccagtc atcatccacc gcatcgacct tggaattgtc
     3721 cggccgatgc aggtcgccgc gcaattgcag gttatagggc gggtcggcaa aaatcaggtc
     3781 gatgctgcct tcgggcagcg aattcatgat ctcgatgcaa tcgcccgcca gaatccggtt
     3841 cagcggaagc ggtcgcgccg ccgcggcgca gctttccttg gtcttcgtca tctctgcctc
     3901 tcggggatgc cggctttggc cggtctgatc tgtggacagg atgagtcaca ggcgattcgc
     3961 cgtcaatttc ttttttgaat caagggcttg aagaacgggg tttacacaag atattgtgga
     4021 ccggccgaaa cgagcgccta tgatgtgggg tcagacccaa atctagaagg gcacgcttgt
     4081 gtgcgggcgt gggatagcct gcgttcacct cccagccata gccgggatgc tgttgcgcca
     4141 aatccaccat gatgcggtcg cgcaacacct tggccaggat cgaggccgcc gcaatcgaca
     4201 gcgaccgcgc gtcgccgccc acgatagcct cggcaggccg gtccagcgcg gcgggcaccc
     4261 ggttgccgtc gaccagcacc cggcagggcc tgcaccgcaa cccggccacg gcgcggacca
     4321 tggcaagatg ggctgcgtga tagatgttca gccgctcgat atccgcgacc tcgacatggg
     4381 cgacggacca gtcgcaatgg gccatgatcc aatcggccag cacttcgcgc tgcttgcgcc
     4441 cgaccttctt ggaatcgttc agcccctcgg ggatgttcac cggatcccgc accaccaccg
     4501 cggccgccgt caccggaccg gccagaggcc cgcgaccgac ctcgtcgacg ccggccacca
     4561 gcctggcgcc gcgcgacatg gcggcctgtt catggctgaa atcgggcagg ccggtcatgc
     4621 ggtaatgctg accggcgcga tgcggacttc ttcaagattg acgccctcgc cctcgcgatc
     4681 gacgaccagg aaatcggcgg cgcggtccag cggcgtcagc acaccatgcc agacacccgc
     4741 ccgcaggttc accccc
//
LOCUS       DTVW01000124            3591 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1171691, whole
            genome shotgun sequence.
ACCESSION   DTVW01000124 DTVW01000000
VERSION     DTVW01000124.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3591)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3591)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3591
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1171691"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..545
                     /locus_tag="EYO87_01615"
     CDS             <1..545
                     /locus_tag="EYO87_01615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010440712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="S1 RNA-binding domain-containing protein"
                     /protein_id="HIC64701.1"
                     /translation="GWGGGRGGRADGLSDGDMDRLSETATHISETERRSMAAERDTTD
                     RYLAAYLSERVGTEMTGRISGIQRFGAFVKLDETGADGLLPIRDLGREYFHFDPDAQR
                     LLGADTGLEIALGQRVTVRLTEAVPVTGGLTLELLELDGKALPAGPRKGKNKGGGARR
                     MSTQARLSEVRRAASRRRKR"
     gene            complement(627..1940)
                     /locus_tag="EYO87_01620"
     CDS             complement(627..1940)
                     /locus_tag="EYO87_01620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011508229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="short-chain fatty acid transporter"
                     /protein_id="HIC64702.1"
                     /translation="MLRALSRPATRMMERWLPDAFIFVIVLTLIAAIAAVATQGTNPV
                     TLIRIWGDGFWELLQFSMQMLLVLVTGFILASSPPVCRVLQWIAGFAGSRGSAIVLVS
                     VVSLAASWLNWGFGLVVGAIFAKELARQVRVDYRLLVAAAYSGFVIWHGGLSGSIPLT
                     IATPGHFTENQIGVIPTSQTIFSAWNLTIAVAILITVPLVNRAMLPTEEEQVLVDPAQ
                     LGEDAGPASAERRATPAERLETSPILMWLIGLPGLVWLAIYFLGGGGINLNTVNFLFL
                     FLGILCHGTPRNLLAALDQGVRGGAGIVIQFPFYAGIMAIMTGSGLAASMSEWFVSIS
                     TAESLPFWAFISAGIVNIFVPSGGGQWAVQAPVMLPAAEALGADIPRVVMGVAWGDAW
                     TNLLQPFWALPMLGIAGLKPRDIMGFCVVQLLITGLVIGGLLYLL"
     gene            complement(2102..3364)
                     /locus_tag="EYO87_01625"
     CDS             complement(2102..3364)
                     /locus_tag="EYO87_01625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010398277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family type I secretion periplasmic adaptor
                     subunit"
                     /protein_id="HIC64703.1"
                     /translation="MVGLLAILILFGGFGLWAMESRIAGAVVAPGQVEVEQQRQVVQH
                     PDGGVVEEIAVTDGQSVAAGDLLIRLDGSLVKTELTIVEGQYFEILARRGRLEAERAA
                     AQEITFPRPLTEAAARDASLDDLIAGQRSLFEARRDTQAQSLDQLAKQSQQVAQQVEG
                     IDAQIAAMGQQRDLIGQELKDQQSLLDRGLAQASRVLGLQREAARIDGQIGELKASRA
                     ASETKQTEIDVERLRMTAQRREDAETQLRDLGYRELELAERRRSLTEQISRLDIRAPV
                     AGLIYDLKVTTPRSVIRPAEPLMYIIPQDRPLVIGARIATINVDEVMIGQPVVLRFSS
                     FSSRTTPEIDGRLGRISADALVDEGTRTPYYRAEVTIPPEELEKLGDMALIPGMPVEV
                     FIQTGERSPMAYLLKPLADYFNRAFRES"
BASE COUNT          622 a         1179 c         1227 g          563 t
ORIGIN      
        1 atggctgggg cggcgggcgc gggggcaggg cggacgggct gtcggatggc gacatggacc
       61 gcctgtcaga gaccgcgacc catatcagcg agaccgagcg ccggtcgatg gcggccgaac
      121 gcgacaccac cgaccgctat ctagccgcct acctgtccga gcgtgtgggc accgagatga
      181 cgggccggat cagcggcatc cagcgatttg gcgccttcgt gaaactggac gagaccggag
      241 ccgacggcct gctgccgatc cgcgacctgg gccgcgaata tttccatttc gatcccgatg
      301 cacagaggct tctcggcgcc gataccgggt tggaaatcgc cctgggccag cgtgtcacgg
      361 tgcgcctgac cgaggcggtg ccggtcaccg gcgggctgac gctggaattg ctggaactgg
      421 acggcaaggc actgcccgca ggtccgcgaa agggcaagaa caagggcggc ggcgcccggc
      481 gcatgtccac tcaggcgcgt ttgtccgagg tcaggcgcgc ggccagccga cgcaggaaac
      541 gatagcgcaa tggccgcggc ccggcgcgtt ttttgcgacg aacctgccga gttggaccgg
      601 gggcgaaggg gccaagggcc ccgaggctat agcagataca gaaggccccc gatcaccagg
      661 ccggtgatca gcaattgcac cacgcagaag cccatgatgt cgcgcggttt cagcccggca
      721 attcccagca tcggcagcgc ccagaacggt tgcagcaggt tcgtccaggc atcgccccag
      781 gccacgccca tcaccacgcg cggaatatcg gcgccaagcg cctcggccgc gggcagcatg
      841 acgggcgcct gaaccgccca ttgcccgccc cccgagggaa cgaagatgtt gacgattccc
      901 gcgctgatga aggcccagaa gggcagcgac tcggcggtcg agatcgagac gaaccattcc
      961 gacatgctgg cggccaggcc gctgccggtc atgatcgcca tgatcccggc atagaaggga
     1021 aactggatga cgatcccggc gccgccgcgc acaccctggt ccagtgccgc cagcaggttt
     1081 cgcggcgtgc catggcagag aatgcccagg aacaggaaca ggaaattcac cgtgttcagg
     1141 ttgatgccgc cgccgccgag gaaatagatc gccagccaga ccaatccggg caacccgatc
     1201 agccacatca ggatcgggct ggtttccagc cgctcggcgg gtgtggccct gcgttccgcg
     1261 gaggccggtc cggcatcctc gccaagttgc gccggatcga caaggacctg ttcctcttcg
     1321 gtcggcagca tcgcacgatt gaccagcgga acggtgatca ggatcgcgac cgcgatggtc
     1381 agattccagg ccgagaagat cgtctgcgag gtcggaatca cgccgatctg gttttcggtg
     1441 aaatggcccg gcgtcgcgat ggtcagcggg atcgagccgg acaagccgcc gtgccagatg
     1501 acgaagccgg aataggccgc cgccaccagc agacgataat cgacgcggac ctgccgtgcg
     1561 agttccttgg cgaagatggc gccgacaacc aatccgaagc cccagttcag ccagctcgcg
     1621 gccagcgaca ccacactgac cagcacgatc gccgagccgc gcgagccggc gaagccggcg
     1681 atccattgca ggacgcggca aaccggaggc gaacttgcaa ggatgaagcc ggtgaccagc
     1741 accagcagca tctgcatcga gaattgcaaa agctcccaga aaccgtcgcc ccagatccgg
     1801 atcagcgtca ccggattggt gccctgtgtc gcgaccgccg cgatcgccgc gatcagcgtc
     1861 aggacgatga cgaagatgaa ggcatcgggc agccagcgct ccatcatccg ggttgcgggg
     1921 cgggacaggg ctctcaacat gctggctcct tgctttgtat cgaggtccga ggctgcgtca
     1981 gccggggcgc aggcgcaacc catgggtgat gttcggtcag gccgccgggc cggtcgcggc
     2041 ccccaaggcc agccgccatc atcagaggcc ggccttgacg ggaccttcga ggatggccgg
     2101 atcagctttc gcggaaggcg cggttgaaat agtccgccag cggcttcagc agataggcca
     2161 tggggctgcg ttcgcccgtc tggatgaata cctcgaccgg catccccggg atcagcgcca
     2221 tgtcgcccag cttctcgagt tcttcgggcg gaatcgtgac ctcggcgcgg tagtaagggg
     2281 tccgggtgcc ctcatcgacc agtgcgtcgg ccgaaatccg gcccagccgt ccgtcaattt
     2341 cgggcgtcgt gcgcgacgag aaggacgaga agcgcagcac gaccggctgg ccgatcatca
     2401 cctcgtccac gttgatcgtg gcgatgcgtg cgccgatgac cagcgggcgg tcctgcggta
     2461 tgatatacat caggggctcg gccggccgga tgaccgagcg gggcgtcgtc accttcagat
     2521 cgtagatcag gccggcgaca ggggcgcgga tgtccagccg gctgatctgc tcggtcaggc
     2581 tgcggcggcg ttcggccagt tccagttcgc gatagccaag gtcgcgcaac tgggtttcgg
     2641 catcctcgcg gcgttgggcc gtcatccgca gcctttcgac gtcgatctcg gtctgcttgg
     2701 tttccgaggc cgcgcggctg gccttcaact ctccgatctg gccatcgatc cgggccgcct
     2761 cgcgctgaag acccagcacg cgcgatgcct gcgccagtcc gcgatccagc aggctttgct
     2821 ggtccttcag ttcctgtccg atcaggtcgc gctgctggcc catcgcggca atctgcgcgt
     2881 cgatcccttc gacctgctgg gccacctgct gcgattgctt ggcaagctgg tccagcgatt
     2941 gcgcctgcgt atcgcggcgg gcctcgaaca ggctgcgctg gcccgcgatc aggtcgtcaa
     3001 ggcttgcgtc cctggcggcc gcctcggtca gcggacgcgg aaaggtgatc tcttgcgccg
     3061 ccgcgcgttc ggcctcgagc cggccgcgtc gggcgaggat ttcgaaatac tgaccctcga
     3121 cgatggtcag ttcggttttc acaagcgagc cgtccagccg gatcagcaga tcgccggcgg
     3181 cgacggattg cccgtccgtg acggcgattt cctcgaccac gccaccatcg gggtgctgga
     3241 ccacctgtct ttgctgttcg acctcgacct ggcccggcgc gacgaccgcg cccgcgatgc
     3301 ggctttccat cgcccagaga ccgaatccgc cgaacaggat cagaatcgcc agaaggccga
     3361 ccatcagcgg tccgcgcacc ggccagcggc ctggatcggg cgccgcgatc gggcgcggtg
     3421 gtggtggcgg tgagggcggc ggcggcggcg cggggggctg ggcttcgcgg gttcggacca
     3481 gttcgcgaga ttcgcggggc tgatcgtcgc gcacccgcgc cggttcgggg gccggtggtt
     3541 tcgcatgctg cggcgcggcg ccctgcgctt gggcgccgac gccgattccg a
//
LOCUS       DTVW01000125            1364 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1173434, whole
            genome shotgun sequence.
ACCESSION   DTVW01000125 DTVW01000000
VERSION     DTVW01000125.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1364)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1364)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1364
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1173434"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..275)
                     /locus_tag="EYO87_01630"
     CDS             complement(<1..275)
                     /locus_tag="EYO87_01630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64704.1"
                     /translation="MAASLPGAVELNVRLIAGISVFVQVRVPCLQIMSEFIDEMAHDF
                     AQGLIAGGPGGHGPRQHRALTIRRAGLRRHFAQVRGGGLTAQCLGVL"
     gene            274..>1364
                     /locus_tag="EYO87_01635"
     CDS             274..>1364
                     /locus_tag="EYO87_01635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_353229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
                     /protein_id="HIC64705.1"
                     /translation="MDFALSEEQQAIFDMARDFGQRRIAPHAREWEAAGTIPRDLWTE
                     IAQLGFGGLYVGEEHGGSGLGRLDATLVFEALAMADPAVGSFLSIHNMCGGMIDTFGD
                     PETKARWLPGLCSMETIFSYCLTEPGSGSDAAALRTRADRTNEGWRLNGTKAFISGGG
                     YSDAYIAMVRTGTSGPRGISAVIVENGSSGLSFGSLEDKMGWRAQPTTQVQFDDCLVP
                     ADNLLGEEGRGFAYAMAGLDGGRLNISAGALGGAQAALDATMAYMGQRTAFGQSLDRF
                     QALQFRLAEMETALQSARIFLRQAAWKLDQQAPDATKFCAMAKKFVTETGSKVVDQCL
                     QLHGGYGYLADYGIEKLVRDLRVHQILEGT"
BASE COUNT          249 a          427 c          461 g          227 t
ORIGIN      
        1 ctgaggacgc cgaggcattg ggcggtcagc ccgccaccgc gcacctgcgc gaaatggcga
       61 cgcagcccgg ctcggcggat cgtcagcgca cggtgctgtc gcgggccatg gccgccgggg
      121 ccacccgcga tcaggccctg cgcgaagtcg tgcgccatct catcgatgaa ttccgacatg
      181 atttgcaggc aggggacgcg gacttgaacg aaaacggaaa ttcctgcaat taaacgaacg
      241 ttcaattcaa ccgctccggg gagggaggca gccatggatt tcgccttgag cgaggaacag
      301 caggccattt tcgatatggc ccgcgacttc ggccagcgcc gcatcgcccc tcatgcgcgc
      361 gaatgggagg ccgcaggaac catcccgcgc gacctgtgga ccgagatcgc gcagcttggc
      421 ttcggcgggc tttatgtcgg cgaggaacat ggtggttcag gacttggccg gctggacgcg
      481 acgctggtct tcgaggcgct ggccatggcc gatccggctg tcggttcctt cctgtcgatc
      541 cacaacatgt gcggcggcat gatcgacacc ttcggcgacc ccgaaacgaa ggcccgctgg
      601 ctgcccgggc tttgcagcat ggagaccatc ttcagctatt gcctgaccga acccggcagc
      661 ggatcggacg cggcggcgct gcggacacgc gccgatcgca cgaacgaggg ctggcggctg
      721 aacggcacca aggccttcat ctcgggcggc ggctattccg acgcctatat cgccatggtt
      781 cgcaccggca catcaggccc gcgcggcatc agcgcggtga tcgtcgaaaa cggatcttcc
      841 ggtctgtcct tcggatcgct ggaggacaag atgggctggc gcgcgcagcc gaccacgcag
      901 gtccagttcg acgattgcct ggtgccggcg gacaacctgc tgggcgagga aggccgcggc
      961 tttgcctatg ccatggcggg actggatggc gggcggctga acatctcggc cggggcgctt
     1021 ggcggggcgc aggcggcgct ggacgcaacg atggcctata tgggtcagcg gacagccttc
     1081 ggtcaaagcc tcgaccggtt ccaggcgctg caattccgcc tggccgagat ggagacggcc
     1141 ctgcaatcgg cacgcatctt cctgcgccag gcggcctgga agctggatca gcaggcaccg
     1201 gatgcgacca agttctgcgc catggccaag aaattcgtga ctgagaccgg cagcaaggtc
     1261 gtcgaccaat gtctgcaatt gcacggcggt tacggctatc tcgccgacta cggcatcgag
     1321 aaactggtcc gcgatctgcg ggtgcatcag atccttgaag ggac
//
LOCUS       DTVW01000126            3101 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1173542, whole
            genome shotgun sequence.
ACCESSION   DTVW01000126 DTVW01000000
VERSION     DTVW01000126.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3101)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3101)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3101
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1173542"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..591
                     /locus_tag="EYO87_01640"
     CDS             <1..591
                     /locus_tag="EYO87_01640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018303010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64706.1"
                     /translation="TPKGSRCSSSTATPQASPGRGESWWTAAERFLASPSSPSEAEVF
                     WDEFLCSLADRGPRGTDYTLGLYASTGYIARRGRPDSVADLARHELVGYVEDLIYTPE
                     LNYASDILADWRSTIEVATAIGQVEAVRMGAGIGVLHDFMVAGLDLEPLLPEVRAECS
                     YWTVWHENLKTDRRVQAVVEFLDQTARAERRLFVRA"
     gene            complement(603..1409)
                     /gene="iolB"
                     /locus_tag="EYO87_01645"
     CDS             complement(603..1409)
                     /gene="iolB"
                     /locus_tag="EYO87_01645"
                     /EC_number="5.3.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005662626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-deoxy-glucuronate isomerase"
                     /protein_id="HIC64707.1"
                     /translation="MTDLQRKPFGTHGKVHEITPQSAGWRYVGFSLYRLRAGETAAEA
                     TGDREVILVMVEGKAAITGAGQDWGVLGERMNVFEKTPPHCLYLPNGTDWQAVAETDC
                     VIAVCSAPGQGGHEARRIGPDGITLTERGKGTNTRHINNIAMENEDYCDSLLVTEVFT
                     PAGHWSSYPSHRHDEDDFPRITYLEETYYHRLSPASGFGIQRVYTDDGGLDETMAVSD
                     GDVVLVPRGHHPCGAPHGFEMYYLNVMAGPLRKWRFVPAPEVEWIMQGDA"
     gene            complement(1406..1621)
                     /locus_tag="EYO87_01650"
     CDS             complement(1406..1621)
                     /locus_tag="EYO87_01650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018301256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64708.1"
                     /translation="MKLFDPDHPFFAPAWRRGLIVALCLGWAIFELITGAVFWAILFG
                     ALGLWCLYEFFLSPRARARGRDREDER"
     gene            complement(1608..2519)
                     /gene="iolE"
                     /locus_tag="EYO87_01655"
     CDS             complement(1608..2519)
                     /gene="iolE"
                     /locus_tag="EYO87_01655"
                     /EC_number="4.2.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_384458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="myo-inosose-2 dehydratase"
                     /protein_id="HIC64709.1"
                     /translation="MILYGTNPIAWSNDDDWSIGDHLSLDDCLSDCREIGFDGIEKGH
                     KMPGDGTELKQALGAFGLRFAAGWFSTNILTNDIETEKARLKEWIAFTKAAGGDHINA
                     CECSNTVHGSDGTPVNVRPIMTDAEWDRFSKGYEALSAYAHELGVKMGYHHHMGTIIE
                     SAADIDRFMEMAGPETRLLLDTGHAWFGGADPAEVARKYMGRVSHIHCKNVRPDIARQ
                     VREQGLSFLEGVRRGAFTVPGDDEGAVDFAPVLKIAAEHGYDGWLVIEAEQDSAVRDP
                     KHYQALGLRSLKRMAAEAGLDTAHEAV"
     gene            complement(2542..>3101)
                     /locus_tag="EYO87_01660"
     CDS             complement(2542..>3101)
                     /locus_tag="EYO87_01660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002827107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="3D-(3,5/4)-trihydroxycyclohexane-1,2-dione
                     acylhydrolase (decyclizing)"
                     /protein_id="HIC64710.1"
                     /translation="QAAQGGYHLEYGYSCMGYEIAGAMGIKLAAPEKEVICFVGDGSY
                     MMANSELATAAARKVPFTVVLTDNSGYGCINRLQIECGGAEFNNMYKDSDVWPKIDFV
                     AHAAAMGAHAEKAADIADLERKIVEARGRDLPSVILIETDAVPGTGAGGHWWDVAVPQ
                     TGGPERLENARRRYNANAALQRTFN"
BASE COUNT          507 a         1006 c         1009 g          579 t
ORIGIN      
        1 accccaaagg gatcgcgctg ttcgtcatcg acggcaacgc cgcaggcctc acccggtcgc
       61 ggcgaatcat ggtggacggc cgcagagagg ttcttggcat cgccgtccag ccccagcgag
      121 gcagaggtct tctgggacga gttcctctgc tctctcgccg atcgcggccc gcgcgggacc
      181 gactacacgc tcgggcttta cgcatcgaca ggctacatcg cgaggcgggg gcggccggac
      241 agcgttgcgg atcttgcccg gcacgagctt gtcggctacg tggaggatct gatctacacg
      301 cccgaactga actatgcctc ggacattctc gcggactggc gatcgaccat agaggtggcg
      361 accgcgatcg gccaggtcga ggcggttcgc atgggcgctg ggatcggagt gctgcacgat
      421 ttcatggttg ccggattgga tctcgaaccc ttgcttccgg aggtccgcgc ggaatgcagc
      481 tactggacgg tctggcacga gaacctcaag acggaccgcc gggtgcaagc ggtggtcgaa
      541 ttcctcgacc agaccgcgcg ggcagaacgc aggttgttcg ttcgcgcctg acgtcttcgg
      601 cttcatgcgt cgccttgcat gatccactcg acttccggcg ctggcacgaa gcgccacttg
      661 cgcagcggtc cggccatcac gttgaggtag tacatctcga atccgtgagg cgcgccgcag
      721 ggatggtgtc cgcggggcac cagaaccaca tcgccgtccg agaccgccat ggtctcgtcg
      781 agcccgccat catcggtata aacccgctgg atgccgaacc ccgaggccgg gctcagccgg
      841 tggtaatagg tctcttcgag gtaggtgatg cgggggaagt cgtcctcgtc gtggcggtgg
      901 ctgggatagg acgaccagtg gcctgcgggc gtgaaaacct cggttaccag caggctgtcg
      961 caataatcct cgttttccat cgcgatgttg ttgatgtggc gggtattggt gcccttgccg
     1021 cgttcggtga gggtgatgcc gtccggtccg atgcggcgtg cctcgtgacc gccctgtccg
     1081 ggcgccgagc agaccgcgat cacgcagtcg gtctcggcca ctgcctgcca gtcggtgccg
     1141 ttcggcaggt agaggcaatg gggcggcgtc ttttcgaaca cgttcatccg ctcgcccaat
     1201 acgccccagt cctgaccggc gccggtgatg gcggccttgc cctcgaccat caccaggatg
     1261 acttcgcgat cgcccgtcgc ctcggcggcc gtctcgcccg cacgcaggcg gtagagtgag
     1321 aagccgacat agcgccagcc cgccgattgc ggcgtgatct cgtggacctt gccatgcgtg
     1381 ccgaagggtt ttctttgcag atcggtcatc gctcgtcctc gcggtcgcgt ccccgcgccc
     1441 gggccctggg ggacaggaag aattcgtaga ggcaccagag cccgagcgcg ccgaagagga
     1501 tcgcccagaa caccgcgccg gtgatcaact cgaagatcgc ccagcccagg caaagcgcga
     1561 cgatcagccc ccgccgccag gcgggggcga agaaggggtg gtcgggatca aacagcttca
     1621 tgtgcggtgt cgaggccggc ctctgccgcc atccgcttca gcgaacgcag cccgagagct
     1681 tgataatgct tggggtcgcg caccgcgctg tcctgttccg cctcgatcac gagccagccg
     1741 tcgtagccgt gctcggccgc gatcttcaaa acgggcgcga agtccaccgc gccctcgtcg
     1801 tcgcccggca cggtgaaggc cccgcgccgc acgccttcga gaaaggacag accctgctcg
     1861 cgaacttgcc tggcaatatc ggggcggacg ttcttgcaat gaatgtggct cacgcggccc
     1921 atgtatttcc gcgcaacctc ggccggatcg gcaccgccga accatgcgtg accggtatcg
     1981 agcagaaggc gcgtctcggg gcccgccatc tccatgaagc ggtcgatatc cgccgcgctt
     2041 tcgatgatcg tgcccatatg gtggtgatag cccatcttga cgccaagctc gtgcgcatag
     2101 gccgacagcg cctcgtagcc cttcgagaag cggtcccatt cggcgtccgt catgatgggg
     2161 cggacgttca ccggggttcc gtcgctgcca tgcaccgtgt tcgaacactc gcaggcattg
     2221 atgtggtcgc cgccggccgc cttggtgaac gcgatccact ctttcaggcg ggccttctcg
     2281 gtctcgatgt cgttcgtcag gatgttggtc gaaaaccagc ccgcggcgaa ccgcaggcca
     2341 aaggctccga gcgcctgttt cagctccgtg ccgtcgccgg gcatcttgtg ccccttctcg
     2401 atgccgtcga aaccgatctc gcggcaatcg ctcaggcagt cgtcgaggct caggtgatcg
     2461 ccaatcgacc agtcgtcgtc gttggaccac gcgatggggt tcgtgccgta aaggatcatg
     2521 gtgtgtctcc cgaaggacag atcaattgaa ggttctctga agcgccgcgt tggcgttgta
     2581 gcggcggcgg gcgttttcga gccgctcggg tccgccagtc tggggcacgg cgacatccca
     2641 ccagtggcca ccggccccgg ttccgggcac cgcgtcggtc tcgatcagga tcacgcttgg
     2701 caagtcgcgg ccgcgtgcct cgacgatctt gcgttccaga tccgcgatat cggcggcctt
     2761 ctccgcatgg gcgcccattg cggcggcatg cgcgacgaag tcgatcttcg gccagacgtc
     2821 gctgtccttg tacatgttgt tgaattcggc cccgccgcac tcgatctgca gccggttgat
     2881 gcagccatag cccgagttgt cggtcagaac gaccgtgaag ggcaccttgc gggcggcggc
     2941 ggtggcgagc tcggaattgg ccatcatgta actgccgtcg ccgacgaaac agatgacctc
     3001 cttctccggc gcggcgagct tgatgcccat ggcgccggcg atctcgtagc ccatgcagga
     3061 atagccgtat tccaagtgat agccgccctg cgcagcctgc c
//
LOCUS       DTVW01000127            1601 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1173586, whole
            genome shotgun sequence.
ACCESSION   DTVW01000127 DTVW01000000
VERSION     DTVW01000127.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1601)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1601)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1601
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1173586"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1064
                     /locus_tag="EYO87_01665"
     CDS             <1..1064
                     /locus_tag="EYO87_01665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017927312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HIC64711.1"
                     /translation="KGAAAILMEVKTGEIVAMASLPDFDPNNRPRPLLKGDPSDSPLF
                     NRAVQGQYELGSTFKIFPVAQALDLKLVNPNSIINTTTPMKFGKYRINDFDDYGPQLS
                     VTSVIVKSSNVGTIRIAQLLGPDRQREFLKRLGLFEPSPIELVEAPTGLPLVPSRWPP
                     VTAATVAYGQGIAVSPLHLASAYATIGNDGIKVTPTLIRGRKRPEGERLLSTRAAQQA
                     VAMLRQVVVRGTATRAEVEGYEIGGKTGTADKPRPSGGYYKNKVVSSFASIFPTSDPQ
                     YVLVVTLDEPSITTNYGGESRTAGTTAVPVAAELVRRLGPLLGLEPRTEEKLPVFAAR
                     YQPRVESAADDGIKLVANK"
     gene            1061..>1601
                     /locus_tag="EYO87_01670"
     CDS             1061..>1601
                     /locus_tag="EYO87_01670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005856837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
                     6-diaminopimelate ligase"
                     /protein_id="HIC64712.1"
                     /translation="MTGEIVGQGRKTLAQLGLRARDGLDPAITGLSLDSRTVRPGHLF
                     AALPGSAMHGAEFIRYALRMEAAAVLTDRAGADIAAGALADWDGALIIAQDPRAALAG
                     AAALWFETQPRHVVAVTGTSGKTSVASFTRQIWQSLGHSAISLGTMGVQGDFEAALKH
                     TTPDPLTLHRILSEAAQAGV"
BASE COUNT          289 a          514 c          536 g          262 t
ORIGIN      
        1 ccaagggcgc cgccgcgatc ctgatggagg tcaagaccgg cgagatcgtc gccatggcca
       61 gcctgcccga tttcgacccg aataacaggc cacggccgct gctgaagggt gatccgtcgg
      121 acagcccgct gttcaatcgc gccgttcagg ggcaatacga gctgggctcg accttcaaga
      181 tctttccggt cgcgcaggcg ctggatctga agctggtgaa cccgaattcg atcatcaata
      241 cgaccacccc gatgaagttc gggaaatatc ggatcaacga tttcgacgat tatggcccgc
      301 aactcagcgt gacgagtgtc atcgtgaagt cctcgaacgt gggcacgatc cggatcgcac
      361 agcttctggg accggatcgg cagcgggaat ttctgaaacg gcttggcctg ttcgagccgt
      421 cgccgataga actggtcgaa gcgccaaccg gtctgccgct ggtgccgtcg cgctggccgc
      481 cagtgacggc ggcgaccgtc gcctatggcc aaggcattgc cgtcagtccg ctgcatctgg
      541 cctcggccta tgcaacgatc ggcaatgacg gaatcaaggt cacgccgacc ctgatccgcg
      601 gtcgcaagcg ccccgagggc gaacggctgc tgtccacccg cgccgcgcaa caggccgtcg
      661 ccatgctgcg tcaggtggtc gtgcgcggca ccgccacccg ggccgaggtc gagggatacg
      721 agatcggcgg caagaccggc accgccgaca agccacgtcc atcgggcggc tattataaaa
      781 acaaggtggt ctcgagcttc gcttcgatct ttccaaccag cgatccgcaa tacgtgttgg
      841 tcgtgacgct tgacgagccc tcgatcacca ccaattacgg cggcgaaagc cgcaccgcgg
      901 gaacgaccgc ggtgccggtg gcggcagaac tggttcggcg tctgggaccg ctgctgggcc
      961 tggaacccag gaccgaagaa aagctgccgg tctttgccgc ccgctaccag ccgcgtgttg
     1021 aatcggctgc ggacgatggg ataaagctcg tcgcgaacaa atgacgggtg agatcgtggg
     1081 gcagggcaga aagacgctgg cgcaactggg cctgcgggcc agggatgggc tggatcccgc
     1141 gatcaccgga ctttcgctgg atagccggac ggtcaggccg ggccatctgt tcgccgccct
     1201 gccgggatcg gcgatgcatg gggcggaatt cattcgctac gccctgcgca tggaggcggc
     1261 ggcggtgctg accgaccgcg ccggggcgga catcgcggcc ggggcgctgg ccgattggga
     1321 tggcgcgctg atcatcgccc aggatccgcg cgcggccctt gccggagccg cggccctgtg
     1381 gttcgagacg cagccgcgtc atgtggtggc cgtcaccggc acatccggca agacctcggt
     1441 cgccagtttc acccgccaga tctggcagtc gctgggccac agtgcgatca gccttggcac
     1501 gatgggcgtt cagggcgatt tcgaggctgc gttgaagcac acgacgcccg atccgctgac
     1561 cctgcaccgc atcctgtccg aggccgccca ggccggcgtg a
//
LOCUS       DTVW01000128            1204 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1176481, whole
            genome shotgun sequence.
ACCESSION   DTVW01000128 DTVW01000000
VERSION     DTVW01000128.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1204)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1204)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1204
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1176481"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..375
                     /gene="msrA"
                     /locus_tag="EYO87_01675"
     CDS             <1..375
                     /gene="msrA"
                     /locus_tag="EYO87_01675"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010393617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HIC64713.1"
                     /translation="GHAEVVRVVFDSSLISYDHLLQLFWENHDPTQGDRQGNDVGPQY
                     RSLIMVFNSSQRHAAEASKIDYGNRLAVEGFGKITTQIIDKGAFWPAPEAHQQYLEKN
                     PDGYCGLKGTGVEASLPNPDPI"
     gene            375..>1204
                     /locus_tag="EYO87_01680"
     CDS             375..>1204
                     /locus_tag="EYO87_01680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011746967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HIC64714.1"
                     /translation="MPTFTALTHLAGREPAEALAEACEDLTPEPVGAGVFEIEDGSDR
                     WEVGLYFLEAPDEVALALLAAAWRAEPFVISELPEVDWVAHVRRELTPVEAGRFFVHG
                     THDADKVPQGVEALCIEAAMAFGTGHHGTTKGCLEALDRLADDGYQAHRIADIGCGTA
                     VLAMGAARIWPVTVVAGDIDRVAVDTAAANVIANGLDGRVECIEATGFDHPILEQAAP
                     FDLVLANILKQPLIDLSPEMARHVSPGGKIILSGILGDQGQDVIAAYEAAGFALDRRD
                     "
BASE COUNT          210 a          377 c          412 g          205 t
ORIGIN      
        1 ggccacgccg aggtggtgcg cgtggtcttt gacagttcgc tgatcagcta cgatcatctg
       61 ctgcaattgt tctgggaaaa ccacgatccg acgcagggcg accggcaggg aaacgatgtt
      121 ggcccgcaat atcgcagcct gatcatggtc ttcaattcca gccagcgaca cgccgccgag
      181 gcctcgaaga tcgattacgg caaccggctg gcggtcgagg gctttggcaa gatcaccacg
      241 cagatcatcg acaagggcgc gttctggccg gcccccgagg cgcatcagca atatctggaa
      301 aagaatcccg acggttattg cgggttgaag gggacagggg tagaggcgtc cctgcccaac
      361 ccggacccga tctgatgccc accttcaccg ccctgaccca tcttgccggc cgcgaacccg
      421 ccgaggcgct ggccgaggcc tgcgaggatc tgacccccga acccgtcggc gccggcgtgt
      481 tcgagatcga ggacggatcg gatcgctggg aggtcgggct ctatttcctc gaagccccgg
      541 acgaggtggc cctggcgctg ctggccgccg catggcgggc cgagcctttc gtgatctcgg
      601 aactgcccga ggtcgattgg gtggcccatg tgcggcgcga actgacaccg gtcgaggcgg
      661 gtcgcttctt cgtccatggc acccatgatg ccgacaaggt gccccagggc gtcgaggccc
      721 tgtgcatcga ggccgcgatg gcctttggca ccggccacca cggcaccacc aagggctgtc
      781 tggaggcgct ggaccggctg gccgatgacg gctaccaggc gcatcggatt gccgatatcg
      841 gctgcggcac ggcggttctg gcgatggggg cggcacggat ctggccggtc acggtcgtgg
      901 ccggcgacat cgaccgcgtg gcggtcgata ccgcggcggc caatgtgatc gcaaacgggc
      961 tggacggccg ggtggaatgt atcgaggcca cgggtttcga tcatccgatc ctggaacagg
     1021 ccgcgccctt cgatctggta ttggcgaaca tcctcaaaca accgctgatc gatctgtcgc
     1081 ccgaaatggc gcgccatgtg tcgcccggcg gcaagatcat cctgtccggg atcctcggcg
     1141 atcaggggca agatgtcatc gcggcctatg aggcggcggg atttgcgctg gaccggcgcg
     1201 acga
//
LOCUS       DTVW01000129            2387 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1177065, whole
            genome shotgun sequence.
ACCESSION   DTVW01000129 DTVW01000000
VERSION     DTVW01000129.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2387)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2387)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2387
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1177065"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..938
                     /gene="cpdB"
                     /locus_tag="EYO87_01685"
     CDS             <1..938
                     /gene="cpdB"
                     /locus_tag="EYO87_01685"
                     /EC_number="3.1.3.6"
                     /EC_number="3.1.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009179251.1"
                     /note="periplasmic enzyme; functions during ribonucleic
                     acid degradation; 2',3'-cyclic nucleotides are first
                     converted to 3'-nucleotide and then cleaved to yield a
                     ribonucleotide and a phosphate; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="2',3'-cyclic-nucleotide 2'-phosphodiesterase"
                     /protein_id="HIC64715.1"
                     /translation="TDRKVVALVESVAAIEDSVAAEHQATLDYVRRAVGKTSAPLYSY
                     FALVADDPSVQIVANAQEWYIRQMMAGTEYEGLPILSAAAPFKAGGRGGPDYYTDVPS
                     GDIAIRNVADLYLYPNTIRAVQVTGAQVRDWLERSAGMFNRIRPGQPDQMLLNPEFPS
                     YNFDVIDGVTYRIDLSQPSKYDSDGKIADEGAARIVDLAFAGQPIDPQAEFIVATNNY
                     RAGGGGNFPGNDGSTIVFEGPDTNRDIIVRYIVEQGTIDPEADGNWSFAPLEGATVLF
                     DTGPEAARYLDEIKGVAIKAVGDGENGFARYRITL"
     gene            complement(1160..2002)
                     /locus_tag="EYO87_01690"
     CDS             complement(1160..2002)
                     /locus_tag="EYO87_01690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008882959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase family protein"
                     /protein_id="HIC64716.1"
                     /translation="MKLGILHETVYRYDHPIRNFVQSLRLTPSVFEGQKAHDWRIEVS
                     GGVKGPSFRDGAGDWIEGWAVRGPAQEVIVKIAGRVETRDTAGVLRGHREMIHPMAYL
                     RDTGTTRADDRLRQLADSVTEAADNLDLAHRLSAAVAEAIAYRPGVTRTQTTAAEALK
                     LGQGVCQDHTHALIALARIRGLPGRYVSGYLHVTEDDQSQEAAHAWAEIHVERLGWVG
                     FDAANACCPDERYVRLASGLDAADAAPIRGIAIGRGVEKLDVAVRVEDIETLQGQSQS
                     QTQS"
     gene            complement(2007..>2387)
                     /locus_tag="EYO87_01695"
     CDS             complement(2007..>2387)
                     /locus_tag="EYO87_01695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011747164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-E domain-containing protein"
                     /protein_id="HIC64717.1"
                     /translation="GSGLDTYQWQVILRALSAHRAYHWAYGGDITAGRVADFLILNGE
                     SPRSLITSLYEGVWHLEGLAKRYGDKAPTTARDKSREVLEALQARDIDAIFDEGLHEF
                     LSWFIAEIGVISMRVHEDYLLGGS"
BASE COUNT          412 a          783 c          771 g          421 t
ORIGIN      
        1 acacggatcg caaagtcgtg gcgctggtcg aaagcgtggc ggcgatcgag gacagcgtcg
       61 cggccgaaca tcaggcaacg ctggactacg tccgccgtgc ggtgggcaag acctcggccc
      121 cgctttacag ctatttcgcg ctggtggcgg acgatccctc ggtccagatc gtcgcgaatg
      181 cgcaagaatg gtatatccgg cagatgatgg cgggaaccga atatgagggt ctgccgatcc
      241 tgtccgccgc cgcacccttc aaggccggcg gccgtggcgg cccggattac tacaccgacg
      301 tgcccagcgg cgatatcgcg atcaggaatg tcgccgatct ctatctctat ccaaacacga
      361 tccgggcggt gcaggtgacc ggcgcccagg tcagggattg gctggaacgc agcgcgggca
      421 tgttcaaccg gatcaggccc ggccagcctg accagatgtt gctgaacccc gagtttccca
      481 gctacaattt cgacgtgatc gacggcgtga cctatcgcat cgacctgtcg cagccctcga
      541 aatatgacag tgacggaaag atcgccgacg agggcgcggc gcgcatagtc gatctggcct
      601 tcgcggggca gccgatcgac ccgcaggccg aattcatcgt cgccacgaac aattaccgtg
      661 ccggcggcgg cggaaatttt cccggcaatg acggctcgac catcgtattc gagggcccgg
      721 acacgaaccg cgacatcatc gtgcgctaca tcgtcgagca gggcaccatc gaccccgagg
      781 ccgacggcaa ctggtctttc gccccgctgg agggcgcaac ggtgctgttc gataccggcc
      841 ccgaagccgc gcgctacctc gacgagatca aaggcgttgc cataaaagcg gtgggcgatg
      901 gcgagaacgg cttcgcgcgc tatcgcatca cgctgtaggg tcaggtgtcc gatccggcgg
      961 cggggggcgc ggccccccgg tcgctgacgc gactcccccc gaggtatttt taaagagcgc
     1021 gaggggtgga cgcaggcttc tcgcgctctt tgcaattacc tgcgggggtg aattggccgc
     1081 aggccaggag ggggccggcg aggccccttc gtcgcgaggc gccatgacgt tgcggttttc
     1141 cgaagtgcca aggcgtgttt cagctttgcg tctggctctg gctctggcct tgcagtgtct
     1201 cgatgtcctc gacgcggacc gcgacgtcca gcttttcgac tccccggccg atggcgatgc
     1261 cccggatcgg cgccgcatcg gccgcgtcaa ggcccgaggc cagccggaca tagcgttcgt
     1321 ccgggcagca ggcattggcc gcatcgaagc cgacccatcc caaacgctcg acatggattt
     1381 cggcccaggc atgggccgct tcctgggatt ggtcgtcctc ggtcacgtgc aggtagcccg
     1441 agacatatcg ccccggcaac ccgcggatcc gcgccagcgc gatcagggca tgggtatggt
     1501 cctggcagac gccctgcccc agcttcagcg cctcggcggc cgttgtctgg gtccgggtca
     1561 cgccgggacg ataggcgatg gcctcggcga ccgccgccga caatctgtgc gccagatcca
     1621 ggttgtccgc ggcctcggtc acgctgtcgg ccagttgccg caggcggtca tcggcccgtg
     1681 tcgttccggt gtcgcgcaga taggccatcg ggtggatcat ctcgcgatgg ccgcgcaaca
     1741 cgccggcggt atcgcgggtc tcgacccggc ccgcgatctt cacgatcacc tcctgcgcgg
     1801 ggccgcgcac ggcccagccc tcgatccagt ctccggcacc gtcgcgaaag ctgggtccct
     1861 tgacgccgcc gcttacctcg atgcgccagt catgggcctt ctgcccctcg aagaccgagg
     1921 gagtcagtcg caggctctgg acgaagttgc ggatcgggtg gtcatagcga tagacggttt
     1981 catgaaggat tccgagtttc atccgcctac gagcctccca gcaggtaatc ttcgtgcacg
     2041 cgcatcgaga tgactccgat ctcggcgatg aaccatgaca ggaattcgtg cagcccctca
     2101 tcgaagatcg cgtcgatatc gcgcgcctgc aacgcttcca gcacttcacg cgacttgtcg
     2161 cgcgcggtgg tcggtgcctt gtcgccatag cgtttggcca gtccctccag gtgccagacg
     2221 ccttcgtaaa gcgaggtgat cagcgatcgc gggctttccc cgttcaggat caggaaatcg
     2281 gcgacgcgac cggcggtgat gtcgccgcca taggcccaat gataggcccg atgcgccgac
     2341 agcgccctca ggatcacctg ccactgatag gtgtcaaggc cggagcc
//
LOCUS       DTVW01000130            1819 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1179055, whole
            genome shotgun sequence.
ACCESSION   DTVW01000130 DTVW01000000
VERSION     DTVW01000130.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1819)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1819)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1819
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1179055"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(33..824)
                     /locus_tag="EYO87_01700"
     CDS             complement(33..824)
                     /locus_tag="EYO87_01700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64718.1"
                     /translation="MFSRLAFIASMTLTLAACEGTGLPGSGSQQEPAAQGHKGPPDVS
                     PLEAPIETGGGKTPVATVNPETYNTAAFSARGNEPFWAVDAAGSTAIYRTPDNQKGRD
                     VRVNRIAFAEGVEYIGVLGGRPFVLTVRGDDCRDDMSGQRFPMTAALTVSGRTNRGCA
                     GPASAEVAQAVAAVKAPAPAAPKAARAAAPKPASTKPAPRPAAASATPAASEGTGEMP
                     PAPDASAGSEAGGGTGSSGVPAPALRLPSTPPSVSGDASTDTPTR"
     gene            complement(1062..>1819)
                     /locus_tag="EYO87_01705"
     CDS             complement(1062..>1819)
                     /locus_tag="EYO87_01705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010138164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HIC64719.1"
                     /translation="RPADASMTFGYGRIEIVAALINYTTLILIGFYLIYEGGMRMIDP
                     PQVQGWTVVILGGIALVIDTLTAMLTYSMMKGSVNIRALFLHNLSDAAASVAVVVGGT
                     LIILYDMRWVDPAITIGIALYILYLAFTEIGGPARTLMLGSPPDIDNEAVVRAMREVD
                     GVADLHHVHLWQMQEHEVALDCHVVLTAQGWDESEGIKSAIKDRLRQDFGITHSSLEF
                     EHEDRAHDDADLYGHHNADDKGKPHGHGNADSA"
BASE COUNT          265 a          596 c          644 g          314 t
ORIGIN      
        1 cgggtcgcag gtcgcgggcc gtcgcaggtc actcaccggg tcggggtgtc ggtcgatgcg
       61 tcgcccgaaa cgctgggcgg cgtcgaggga agccgcagcg cgggggcggg aacgccgctg
      121 ctgccggtgc cgccgcccgc ctctgatccg gccgaggcgt ccggcgcggg cggcatctcg
      181 cccgtgcctt cgcttgcggc cggagttgct gaggcggcgg cgggcctggg tgcaggcttg
      241 gtcgaagccg gtttgggggc cgcggcacgg gcggctttcg gcgccgccgg ggccggggcc
      301 ttgacggccg cgacggcctg ggcgacctcg gccgatgcgg gccccgcgca gccgcggttg
      361 gtgcggcccg agacggtaag ggccgcggtc atcgggaaac gctggccgga catgtcgtca
      421 cgacaatcat cgccgcgtac cgtcagcacg aagggccgtc cgcccagcac gccgatatac
      481 tccacgcctt cggcgaaggc gatccggttc acccgcacgt cgcggccctt ctggttgtcg
      541 ggcgtccggt agatcgcggt cgagcccgct gcatccacgg cccagaacgg ctcgtttccg
      601 cgggcgctga aggcggcggt gttgtaggtc tcggggttga cggtcgcgac cggtgtcttg
      661 ccaccgcccg tctcgatcgg cgcctccagc ggcgagacat cgggcggccc cttgtgaccc
      721 tgggccgcgg gttcctgctg actgcccgag ccgggcaggc cggtgccctc gcaggcggcc
      781 agcgtcaggg tcatggatgc gatgaaagcg agacgcgaaa acatcgggcg gccttttcag
      841 tttgttggat cactgctgcc caagcgttag caatgccacg tcgccggagc aagcgccgcg
      901 acccattgcc gcatcatggc ggcgggctgc cgccggtggt ggccgggcgc aaactcggcc
      961 ccggaccgga ccggccgaac ggcttgatgc ggacaggctg cggaccctca cggtgttgag
     1021 ccatcgtgtc taggcttcgc aggtcacgcc gatgatgcgc ctcatgcgct gtcggcgttt
     1081 ccgtgaccat ggggcttgcc cttgtcgtca gcattgtggt gtccgtagag atcggcgtca
     1141 tcgtgggcgc ggtcctcgtg ctcgaactcc agactggaat gggtgatgcc gaaatcctgt
     1201 ctcagccggt ccttgatcgc ggacttgatg ccttcgcttt cgtcccatcc ctgggcggtc
     1261 aggacgacgt ggcagtccag cgcgacctcg tgttcctgca tctgccacag atggacgtga
     1321 tgcaggtccg caacgccatc gacttcgcgc atcgccctga cgaccgcctc gttgtcgatg
     1381 tcgggcgggc tgcccagcat cagcgtccgt gccgggccgc cgatttcggt gaaggccaga
     1441 tagaggatat aaagcgcgat gccgatggtg atggccggat cgacccaccg catgtcgtag
     1501 aggatgatca gcgtgccgcc gacgacgacc gcgaccgaag ctgccgcgtc cgaaaggttg
     1561 tgcaggaaaa gcgcgcggat gttcacgctg cccttcatca tcgaataggt cagcatcgcc
     1621 gtcagggtgt cgatcaccag cgcgatgccc cccaggatga cgaccgtcca gccctgcacc
     1681 tgcggggggt cgatcatccg catcccgcct tcgtagatga ggtagaatcc gatcaggatc
     1741 agcgtcgtgt aattgatcag ggccgccacg atctcgatcc ggccatagcc gaaggtcatg
     1801 ctggcatcgg ccggccggc
//
LOCUS       DTVW01000131            2333 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1181508, whole
            genome shotgun sequence.
ACCESSION   DTVW01000131 DTVW01000000
VERSION     DTVW01000131.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2333)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2333)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2333
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1181508"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..854)
                     /locus_tag="EYO87_01710"
     CDS             complement(<1..854)
                     /locus_tag="EYO87_01710"
                     /inference="COORDINATES: protein motif:HMM:PF13607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-binding protein"
                     /protein_id="HIC64720.1"
                     /translation="MAKPWWKGSGNCSSGGRRKVAEPVVARDFPDLSRLLSPRSVAIL
                     GASERPRSVGSDTLLNLAEHSDFDGQIFPVNPGRERVHGLRAYSAMSALPGPVDVAVV
                     CLPADAVVGALRDCAAAGTGFAVVFTSGFGETGDEGRAVEAEMAEIARQSGMRIYGPN
                     SPGLSNINRRLGLTFSPVFKNDTLGGGIGLVTQGGGLGRAFIQASERGIGVGLWCSTG
                     NEADLTMADVVYHMVGDPDIKVIALLAEGFRDGPRFLAAARAAARAGKPVVAMKVGKS
                     DYGVAATRS"
     gene            complement(790..1281)
                     /locus_tag="EYO87_01715"
     CDS             complement(790..1281)
                     /locus_tag="EYO87_01715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009504610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl dehydratase"
                     /protein_id="HIC64721.1"
                     /translation="MTRPDLSALKGQQLYWEDLNEGDQFDSPTRTITEADVANFACLS
                     GDFNRLHVDAEYAADSAFGQRIAHGLLVVSVMSGLTTRMLMNTFLEPSLLGLLDMQCS
                     FPNPTFIGDTIGVRVTVAEKRETSKPERGILSFRREVINQRGETVVEGVWKLLVRRAP
                     QGG"
     gene            complement(1278..>2333)
                     /locus_tag="EYO87_01720"
     CDS             complement(1278..>2333)
                     /locus_tag="EYO87_01720"
                     /inference="COORDINATES: protein motif:HMM:PF13193.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64722.1"
                     /translation="DGTTIMLHTSGTTGKPKGALRSLFGMEERAIEQRFRPDDRALSA
                     LPICLSAGCTYTLLPLYLGASVYLMRRFDGAAALRLIEDERLTATMLLPAMLQRMVEA
                     EGFASADLSSLGTLQSGGGEMYLDLKRAALDKFGDALMIYAASSEAGPYANLTARDLR
                     RNLAGNCVGRPFFGVELKLLDDDGNEVPQGEVGEICTRSESRYDGYYKDEALTAETRR
                     GDYLTVGDLGRIDDEGLLWFTGRKRDIIKSGGINVYAPEIEEALAGHPAIAEAHCIGL
                     PDPHWTEAICAVIVPAPGAQLTAADVIAHAETRLDRYKRPRRVVFMTAVPRNLTGRVL
                     KAELKEAVLALPEEETQ"
BASE COUNT          413 a          777 c          747 g          396 t
ORIGIN      
        1 gaacgggtgg cagcaacgcc atagtccgac ttgcccacct tcatcgccac caccggcttg
       61 ccggcgcgag cagcggcgcg ggcagctgcc agaaagcgcg gcccgtcgcg gaagccttcg
      121 gcgagaaggg cgattacctt tatgtcggga tcgcccacca tgtggtacac gacatcggcc
      181 atggtcaggt cggcttcgtt gccggtagag caccacaggc caacgccgat accccgttcg
      241 cttgcctgga tgaaggcgcg gccaagtccg ccgccctggg tgacaagccc aatgccgccg
      301 cccagcgtgt cgttcttgaa taccggtgaa aaggtcagcc caaggcggcg gttgatgttg
      361 ctcagccctg gcgagttcgg cccgtagatg cgcatcccgc tttgccgggc gatttcagcc
      421 atctcggctt cgacggcacg gccctcatcc ccggtttcgc caaagccaga ggtgaagacc
      481 accgcaaacc ccgttcctgc tgccgcgcaa tcgcgcaagg cgcccaccac cgcatcggct
      541 ggaaggcaca ccaccgccac atcgacgggg ccaggcaagg ccgacattgc agaataggcg
      601 cgcaaaccat gcaccctttc acgcccgggg ttgaccggaa agatctgccc atcgaagtcg
      661 gaatgctcgg caaggttcag caaggtgtcg ctgcccacgc tacggggcct ttcactggcg
      721 cccaggatcg ccacgctgcg tggcgacaag agccgcgaaa gatcgggaaa gtcgcgggcg
      781 accaccggct cagccacctt gcggcgcccg ccggacgagc agtttccaga ccccttccac
      841 cacggtttcg ccacgctggt tgatgacctc gcgccggaac gacaggatgc cgcgttcggg
      901 tttcgaagtc tcgcgcttct cggctacggt aacgcgcacg ccaatcgtgt cgccgatgaa
      961 ggtggggttg ggaaagctgc actgcatgtc gagcaacccc agaagcgagg gttccaggaa
     1021 cgtgttcatc agcatccgcg tggtcagccc ggacatcacc gacaccacca gaagcccgtg
     1081 cgcgatacgc tggccaaagg ccgaatcggc ggcatattcg gcatcgacgt gcagccggtt
     1141 gaagtcgcct gacaggcagg cgaaattagc cacgtcggcc tcggtgatgg tacgggtggg
     1201 gctatcgaac tggtcgcctt cgttcaggtc ctcccagtag agttgctggc ccttgagggc
     1261 cgaaagatcg ggccgtgtca ttgggtttcc tcctctggca gcgctagcac tgcctctttc
     1321 agttcagcct tgagaacgcg gccggtcagg ttgcgcggca ccgccgtcat aaagaccacg
     1381 cgccgcgggc gcttgtatcg gtcaagccgg gtttcggcat gggcgatcac atcggccgct
     1441 gtcagctgcg cgcccggcgc gggcacgatc actgcgcaga tcgcctcggt ccagtgcgga
     1501 tcgggcaggc cgatgcaatg cgcctcggca atcgccgggt ggccggccag cgcctcctcg
     1561 atctcggggg cgtagacatt gatgccgccg ctcttgatga tgtcgcgctt gcgacccgtg
     1621 aaccagagca gcccttcgtc gtcgatccgg cccagatcgc ccacggtcag atagtcgccg
     1681 cgccgggttt cagcggtcag cgcctcatcc ttgtaatacc cgtcgtagcg gctttcgctg
     1741 cgggtgcaga tctcgccgac ctcgccctgc ggcacctcgt ttccatcgtc gtccagcagt
     1801 ttgagttcca ccccgaagaa ggggcggccg acgcagttgc ccgcaaggtt gcggcgcaga
     1861 tcccgagcgg tcaggttggc atagggtcct gcttcgctgg aggcggcata gatcatcagc
     1921 gcatcgccga acttgtcgag cgcggcacgc ttgaggtcga gatacatctc gccgccgcca
     1981 gattgcaaag tccccagcga cgacagatcg gcgctcgcga acccctcggc ctcgaccatc
     2041 cgctggagca tggcgggcag cagcatggtg gcggtcagcc gctcgtcttc gatcagccgt
     2101 agcgcggcgg ccccgtcgaa gcggcgcatc agatagacgc tggcacccag ataaagcggc
     2161 agcagcgtat aggtgcagcc ggccgacagg cagatcggca gcgccgacag cgcccggtcg
     2221 tcggggcgga aacgctgctc gatggcgcgt tcctccatgc cgaagagact gcgcagcgcg
     2281 cccttgggct tgccggtggt ccccgacgtg tgcagcatga tcgtggtgcc gtc
//
LOCUS       DTVW01000132            1302 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1184353, whole
            genome shotgun sequence.
ACCESSION   DTVW01000132 DTVW01000000
VERSION     DTVW01000132.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1302)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1302)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1302
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1184353"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(102..974)
                     /locus_tag="EYO87_01725"
     CDS             complement(102..974)
                     /locus_tag="EYO87_01725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015342641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HIC64723.1"
                     /translation="MNETAATDPVLSKRPQSRVWRKLRGHRSAMFGAVLVGMFVLLAL
                     AAPILPVPDPAAVDWTAIRQPPSAAHWLGTDELGRDQLSRMIWGARASLMAGVVSVGI
                     AIVIGVPLGIIAGYFGGWTDAVISRCTEALLAIPFLILAIALAAFLGPSLTNAMIAIG
                     IAATPVFIRLTRGQAINVASEDYVESAHAIGLSTGVILRRYIFPNVLPPILVQATLTV
                     ASAIIAEASLSFLGLGQQPPAPSWGAMLNVAKGFMTQAPWMALWPGIAIFLVVLGFNL
                     LGDGLRDALDPRED"
     gene            complement(974..>1302)
                     /locus_tag="EYO87_01730"
     CDS             complement(974..>1302)
                     /locus_tag="EYO87_01730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_355945.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HIC64724.1"
                     /translation="VLRQDYVRTARAKGLAERRVIMHHAFRNALTPVVTLMALLFGEL
                     IAGAVLTEQIFTIPGFGKMVVDAVFNRDYAVVQAVVLVTALGFILMNLLADLAYVALN
                     PRLRTG"
BASE COUNT          251 a          427 c          431 g          193 t
ORIGIN      
        1 atcccggtcg ccgaggccag ccaatgggtc gaggtgacgg tgccgaaggt gccgcggata
       61 tcgggtcgtg tggtgaaatt gttcatgcct gttcctgtcg atcaatcctc gcgcgggtcc
      121 agcgcgtcgc gcagaccgtc gcccagaagg ttaaatccca gcaccaccag aaagatcgcg
      181 atgccgggcc acagcgccat ccagggcgcc tgcgtcatga agcccttggc cacgttcagc
      241 attgcccccc agcttggcgc gggcggctgc tggcccagcc ccagaaagga cagcgatgcc
      301 tcggcgatga tggcgctggc gacggtcagc gtggcttgca ccaggatcgg cggcaggaca
      361 ttgggaaaga tatagcggcg caggatgacg cccgtggaca ggccgatggc atgggcgctt
      421 tcgacgtaat cctcggatgc cacgttgatt gcctggcctc gcgtcagtcg gatgaagacc
      481 ggcgtggccg cgatcccgat ggcgatcatc gcattggtca gcgagggccc caggaacgcc
      541 gccagcgcga tggcgagaat caggaacggg atcgccagca gcgcctcggt gcagcgcgag
      601 atcacggcat cggtccagcc gccgaaatac ccggcaatga tccccagagg cacgccgatc
      661 acgatggcaa tgccgacgga taccaccccc gccatcaacg aggcgcgcgc gccccagatc
      721 atccgcgaca actgatcgcg gcccaactcg tccgtgccca gccagtgcgc ggccgagggc
      781 ggttgccgga tcgcggtcca gtcgacggcg gcgggatcgg gcacgggcag gatcggcgcc
      841 gccagcgcca gcaggacgaa cattcccaca agcaccgcgc cgaacatggc gctgcgatgg
      901 ccgcgcagct tgcgccagac gcggctttgc gggcgtttcg acaggacggg atcggtcgca
      961 gcggtctcgt tcatcagccg gtcctcagcc gcgggttcag tgccacatag gccaggtcgg
     1021 ccagaagatt catcaggata aagcccagcg cggtgacaag aaccaccgcc tgcaccaccg
     1081 cgtaatcgcg gttgaagacg gcatcgacca ccatcttgcc gaagcctgga atggtgaaga
     1141 tctgttcggt cagcacagcc cccgcgatga gttcgccaaa cagcagcgcc atcagcgtga
     1201 cgaccggcgt cagggcgttt cggaaggcgt ggtgcatgat caccctgcgt tcggccagac
     1261 ccttggcgcg ggcggtgcgg acgtagtcct gcctcaacac cc
//
LOCUS       DTVW01000133            1777 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1184840, whole
            genome shotgun sequence.
ACCESSION   DTVW01000133 DTVW01000000
VERSION     DTVW01000133.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1777)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1777)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1777
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1184840"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(64..180)
                     /locus_tag="EYO87_01735"
                     /pseudo
     CDS             complement(64..180)
                     /locus_tag="EYO87_01735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005611172.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
     gene            complement(177..785)
                     /locus_tag="EYO87_01740"
     CDS             complement(177..785)
                     /locus_tag="EYO87_01740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020043150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydro-3-deoxy-6-phosphogalactonate aldolase"
                     /protein_id="HIC64725.1"
                     /translation="MSRPLIAILRGITPTEALPVAGALIEAGVTRIEVPLNSPEPLDS
                     IARMVTAYGSDALIGAGTVLTPGQVREVAATGARLIVSPNCDPAVIAASKSAGMDSFP
                     GVMTPTEAFAALAAGADGLKLFPGELIGPAGLRAMRVVLPPEVPLFAVGGVSADNMAD
                     WHRAGAAGYGIGSALYKPGDSAATVAARARELIARFDGACAA"
     gene            complement(782..1690)
                     /locus_tag="EYO87_01745"
     CDS             complement(782..1690)
                     /locus_tag="EYO87_01745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018302738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydro-3-deoxygalactonokinase"
                     /protein_id="HIC64726.1"
                     /translation="MSRANPDWIAADWGTTHLRLWAMNGDRVLDRRVSDQGMGRLAPS
                     EFGPVLESALRGWGVAPVVACGMVGARQGWFEAPYTPVPCPARPRLVRVPGHAARPVF
                     IACGLRQDSPPDVMRGEETQIAGLSLRDPDFDGAVCLPGTHTKWVTIAGGRVACFRSC
                     MTGEIFDLLAHRSILRHMLGAGGDDMAAFDAACQAALTDPAAAYGALFGLRAGALLND
                     LAPATAASRLSGLLIGWELAATRDLWAGRTVALIGSRVLSPLYARALATRGIAATVHD
                     AEYLTLAGLFAARHSLEISHDTGAQP"
BASE COUNT          288 a          652 c          606 g          231 t
ORIGIN      
        1 atcgacccag gcggcggcgg cggccatctg gccgatcggc cattcccgcg cgccctgcgc
       61 gtcgcggctg agcagccgtc cgtcgaggat gtcgaaccag aacagctgac cgcgcagcgg
      121 gtgccacaaa ggtccttcgc ccagaaaaca ggcgcggcca tcaaggatcc ccgccgtcat
      181 gccgcgcacg ccccgtcaaa gcgggctatc agctcgcgcg ccctcgcggc gacggtcgcg
      241 gcgctgtcgc cgggcttgta gagcgccgat ccgatcccgt atccggcggc accggcgcgg
      301 tgccaatcgg ccatgttgtc ggccgagacg ccgcccaccg cgaacagcgg cacctccggc
      361 ggcagcacga cgcgcattgc gcgcagtccc gccgggccga tcaattcgcc gggaaacagc
      421 ttcagaccgt ccgcccctgc ggccagcgcg gcaaaagcct cggtcggggt catcacgccg
      481 ggaaagctgt ccatcccggc ggacttgctg gccgcgatca ccgccggatc gcaattgggc
      541 gagacgatca gccgcgcgcc ggtcgcggcc acctcgcgca cctgaccggg ggtcagcacc
      601 gtgcccgcgc cgatcagcgc atccgacccg taggccgtga ccatgcgggc gatgctgtcc
      661 agcggttcgg gcgagttcag cggcacctcg atccgggtca cgcccgcctc gatcagtgcc
      721 ccggccacgg gcagcgcctc ggtcggggtg attccgcgca ggatggcgat cagggggcgg
      781 ctcatggctg ggctccggtg tcatgggaaa tttccaggct gtggcgcgcg gcaaaaagcc
      841 cggcgagggt cagatattcg gcgtcatgga cggtggcggc gatcccgcgg gtcgccagcg
      901 cccgggcata aagggggctg agcacgcggc tgccgatcag cgccaccgtt cggcccgccc
      961 aaagatcgcg cgtcgcggcc agttcccagc cgatcagcag cccggacaga cgcgaggcag
     1021 cggtcgcggg ggcgagatcg ttcagcaatg ccccggcccg cagaccgaac agcgcgccat
     1081 aggccgcggc cggatcggtc agcgccgcct gacaggccgc gtcgaaggcg gccatgtcgt
     1141 cacctcccgc gcccagcatg tgccgcagga tcgaacgatg ggcgagcaga tcgaagatct
     1201 cgccggtcat gcagctgcgg aaacaggcaa cgcgcccgcc cgcaatcgtg acccatttgg
     1261 tatgggtccc cggcaggcag accgctccgt cgaaatccgg atcgcgcagg ctcaggccgg
     1321 caatctgggt ttcctcgccg cgcatcacgt cgggcgggct gtcctgacgc aggccgcagg
     1381 cgatgaagac cggccgcgcg gcgtgccccg gcaccctgac cagccgcggc cgcgccggac
     1441 agggcaccgg cgtatagggc gcctcgaacc agccctggcg cgcgccgacc atgccgcagg
     1501 cgacgaccgg ggccaccccc catccccgca gcgccgattc cagcaccggg ccgaattccg
     1561 agggagccag acggcccatc ccctgatccg agacacggcg atccagcacc cggtcgccat
     1621 tcatggccca cagccgcaga tgcgtcgtgc cccaatcggc ggcgatccag tcggggttgg
     1681 cgcggctcat gccctttctc cttcgggtat acgcggtgca tgcagttggg actggtcagc
     1741 tgggatgcgg atatgcgacc agaccgcacc acctttc
//
LOCUS       DTVW01000134            1129 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1186977, whole
            genome shotgun sequence.
ACCESSION   DTVW01000134 DTVW01000000
VERSION     DTVW01000134.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1129)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1129)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1129
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1186977"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(98..394)
                     /locus_tag="EYO87_01750"
                     /pseudo
     CDS             complement(98..394)
                     /locus_tag="EYO87_01750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011427389.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            494..748
                     /locus_tag="EYO87_01755"
                     /pseudo
     CDS             494..748
                     /locus_tag="EYO87_01755"
                     /inference="COORDINATES: protein motif:HMM:PF00872.16"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS256 family transposase"
     gene            778..>1129
                     /locus_tag="EYO87_01760"
     CDS             778..>1129
                     /locus_tag="EYO87_01760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017633199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1499 domain-containing protein"
                     /protein_id="HIC64727.1"
                     /translation="MALNPAPPAAPNHDISTDTANPPSFQVLDDTRAGASNTLGYAGP
                     ELAAAQAAAYPDIAPLATDLPADAAYLRALKIAEDMGWEIVAKDPERLCFEATARTPD
                     FYFADDVVVVVTSRE"
BASE COUNT          228 a          369 c          351 g          181 t
ORIGIN      
        1 ctcgaccata cacctcgatg gccacccggg attgcaccga tgaaggcgca gaaattacac
       61 cacgtcctcg gacgctaaca gggacccggg ttttccagtt ccagggcaga ggttcaggca
      121 cgcgcgagac gggcatgtca ggcagccggg tgagaacatc ggcgtgcagg gtctacgggt
      181 cgatgtcgtt cattttggcc gtgacgatga gggtatacgt ggcgttggcc cgatcaccac
      241 cgcgttcgga acccgcaaaa agccatgact ttctgcccaa agccacgccg cgcagggcgc
      301 gttcggccgc attgttcgtc aggcagatgc gcccgtcatc gaggaatgcc gtgaaggcct
      361 gccatcggcc gtctttctcg aacatggagt tgatggtcat gtctcggaag tggtggaaat
      421 tgtttggcgg cgcagtctcc gggtgacttg aacccaccca accggcggct ggcaccgcca
      481 gggagattac gccatgacca agattccaga caccgacacg catgcgctac tgcccggtgc
      541 gacgggctac gatccgatcg aggatcggct tcggcagaac atccgggcga ccatcgagac
      601 gctctttgag gaagaatccg aggccttcat cgggcgctgc cactatggcc gcggcggcgg
      661 atcaaagaag ggctgccgct acggacatcg cgaccgccgg ctcaccgcca cattcggcac
      721 cgggacggtg cgcgtgccgc gcgcccggat cgaggacgat gcgggcaaga tcagcgaatg
      781 gcgctcaacc cggcgccgcc cgcagcgccc aaccacgaca tctcgaccga cacggccaac
      841 ccaccctcat tccaggtgct ggacgacacc cgcgcagggg cgagcaatac gcttggatac
      901 gctggtcccg aactggcggc ggcccaagcc gccgcctatc ccgacatcgc accgctcgca
      961 acagacctgc ccgcagatgc ggcgtatctg cgcgctctca aaatcgccga ggacatgggc
     1021 tgggaaatcg ttgcgaaaga ccccgagcgc ctctgcttcg aggcaacagc ccgaacccct
     1081 gacttctact tcgcggacga tgtcgtggtc gtcgtgacgt cacgggaag
//
LOCUS       DTVW01000135            5040 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1187841, whole
            genome shotgun sequence.
ACCESSION   DTVW01000135 DTVW01000000
VERSION     DTVW01000135.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 5040)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5040)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5040
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1187841"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(188..1465)
                     /locus_tag="EYO87_01765"
     CDS             complement(188..1465)
                     /locus_tag="EYO87_01765"
                     /inference="COORDINATES: protein
                     motif:HMM:PF00188.24,HMM:PF00353.17"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64728.1"
                     /translation="MSIASAAERYFVSLVNASRASYGLDPLRIETALNQSADAHSAWM
                     LSADVFSHTGRGGSSPTDRMRAAGLDLDGRWMTSENIAYRSVTTGDGLNDDVRALHRM
                     FMDSPSHRANILNPDAEVIGIGLKVGDFTRDNQDYKVLMVTQNFAATDGDVDIDYSNG
                     LPRLPLPDLAVTQPGRAAWLPHFDGQTYLSAPSGSVRGTSRGDDIRLGGFDTFVRAGS
                     GHDWIAGGNGDDTLEGQGGNDRVLGQGGNDRLVGGLGNDLMHGGNGDDLILGKDGNDR
                     LTGGAGADLVYGGAGNDRIAGGSGDDRLVGVGGDDYLAGNDGDDRLEGRGGDDTLRGA
                     AGNDTLIGGAGADSFIFGPGGGVDRVADFDPIEDRVMLARSAIGTSDANFISDAIRET
                     AGGVIVELLDADRIVFVGESLSAQDVTNAIYLV"
     gene            complement(1628..2677)
                     /locus_tag="EYO87_01770"
     CDS             complement(1628..2677)
                     /locus_tag="EYO87_01770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018001449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family transcriptional regulator"
                     /protein_id="HIC64729.1"
                     /translation="MDHEANPPGRAKLSDVARLAGVSASTVSRVLSRPDLVAEPTRTR
                     VAEAVAATGYRLNHAARNLRKQRTGSVVALVPNLGNPFFAKILDGMGRELAAAGYDLL
                     VADTLDESGRHRDLRAFLDPSRADGIILLDGLVPHADLTGGAGLPPVVTACEWIEGAD
                     LPRVVLDNRQGARLAVAHLRELGHDRIGLIGGPPDNVLHKARLDGAMQEARNAGITLF
                     PGDFSLQAGRGAARDWIAMPAHSRPTAVFAFSDEMACAFQSGLIRAGYRVPADLSLIG
                     FDDIDLASHLTPALTTIRQPKRALGREAARIVLARIAGHAAPAITRLQPRLMVRETTA
                     APPESANRTASPTGA"
     gene            2771..3823
                     /locus_tag="EYO87_01775"
     CDS             2771..3823
                     /locus_tag="EYO87_01775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011750987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate isomerase/epimerase"
                     /protein_id="HIC64730.1"
                     /translation="MQTIKGPALFLAQFIGEAAPFDTWDGITRWAAGCGYLGVQVPTS
                     DPRILDLDRAESSQDYRDEFLGTARENGVEVTELSTHLQGQLVAVHPAYDAGFDAFAP
                     PGLRGDPAARQEWAVDQIGRAIRVSRLLGLDRMATFSGALAWPYLYPWPQRAPGLVEA
                     AFDTLAARWQPLLDLAEDHGVDICYEIHPGEDLHDGITFEMFLDRVKDHGRANMLFDP
                     SHYLLQQLDYLQNIDIYRDRIRMFHVKDAEFRPTGRQGVYGGFQSWADRAGRFRSLGD
                     GQVEFGAIFSKLTQYGFDGWAVVEWECALKHPEDGAREGAAFVRDHIIRVTPHAFDDF
                     AASGVDRAAIDKALGL"
     gene            3820..4914
                     /locus_tag="EYO87_01780"
     CDS             3820..4914
                     /locus_tag="EYO87_01780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011750988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HIC64731.1"
                     /translation="MRPIRLGMVGGGSGAFIGAIHRIAARMDGHFTLVAGALSSEPGR
                     AQASAAELGVRGYDDFGAMARDEAAREDGIEAVAIVTPNHMHAAPAAAFLNAGIHVIC
                     DKPLAATRGQAAEIEAAAKSGTARFFLTHNYSALPMIREARAMVAEGAIGDLRLVQAE
                     YLQGWLSGPARGKQAEWRTDPVRAGAGALGDIGTHAWQLAAFVTGQTPDRLSADLSSI
                     VPGRPIDDDARIALRYGSGAKGGIWASQVAIGQENGLSLRLFGTEGALAWRLPDPERL
                     IFTPRDDAPRILTRAQDRSASFRTPPGHPEGYLEGFANLYSDIAAIIRGDTTHLDRVP
                     GLEAGLSGMAFIAAAQESSARDGAWIRVAE"
     gene            4911..>5040
                     /locus_tag="EYO87_01785"
     CDS             4911..>5040
                     /locus_tag="EYO87_01785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010396598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HIC64732.1"
                     /translation="MTVLALQDVSRRFGPIEVLHHVDLALEPGQVHALIGENGAGKS"
BASE COUNT          820 a         1748 c         1651 g          821 t
ORIGIN      
        1 tgatcgcgcg cgccgaaggg gccgaaccgg acccggatgc gatcatcgcc gacctctcgg
       61 acaggctggc cagattcaag cagcccaaga aggtgatgat catcgacgaa ttgccgcgca
      121 acacgatggg caaggtgcag aaagccgcgt tgcgggccga atatgccgaa cttttcagcg
      181 gccgtgatca gaccaggtag atcgcgttcg tcacgtcctg ggcgctgagg ctctcgccca
      241 cgaagacgat cctgtccgcg tccagaagct cgacaatgac gccacctgcc gtctcgcgga
      301 tcgcgtcgct gatgaaattc gcgtcgctgg ttccgatggc gcttcgcgcg agcatcaccc
      361 ggtcctcgat cggatcgaaa tccgccaccc gatcgacgcc gccgcccggg ccgaagatga
      421 aactgtccgc gcccgcgccg ccgatcagcg tgtcattgcc cgccgcgcca cgcagcgtat
      481 cgtcgccgcc gcgcccttca agccggtcat cgccatcatt tccggccaga taatcgtcgc
      541 cgccgacgcc gaccagccgg tcatcgcccg agcctccggc gatccggtca ttgcccgcgc
      601 cgccatagac caggtcggca ccggcgccgc ccgtcagccg gtcgttgccg tccttgccga
      661 gaatcaggtc gtcgccattg ccgccatgca tcaggtcgtt gcccagcccg ccgaccaggc
      721 ggtcgttgcc gccctgtccc agcacccggt catttccgcc ctgaccctcc agcgtatcgt
      781 cgccattgcc gcccgcgatc cagtcatgtc cgctgcccgc ccgaacgaag gtgtcgaagc
      841 cgcccagccg gatgtcgtcg ccgcgactcg tcccccggac cgatcccgat ggcgcgctga
      901 gataggtctg gccgtcgaaa tggggcagcc atgcggctcg gcccggctgc gtcaccgcca
      961 gatccggcag cggcagtcgc ggcaggccgt tgctgtagtc gatatcgaca tcgccatcgg
     1021 ttgccgcaaa gttctgcgtg accatcagaa ccttgtagtc ctgattgtcg cgggtgaagt
     1081 cgccgacctt gagaccgatc ccgatcacct cggcatcggg gttgaggata ttggcgcgat
     1141 gcgaggggct gtccatgaac atccggtgca gggcgcgcac atcgtcgttc agcccgtcgc
     1201 ccgtcgtaac gctgcgatag gcgatgtttt ccgacgtcat ccagcgccca tccagatcca
     1261 gccccgccgc ccgcatccgg tctgtcgggc tgctgccgcc gcggccggta tgcgaaaaga
     1321 catccgccga cagcatccag gccgaatgcg cgtccgccga ttggttcagc gcggtttcga
     1381 tgcgcagggg gtccagcccg taacttgcgc ggctcgcatt cacgaggctg acgaaatagc
     1441 gttcggcggc ggaggcgatc gacatcgttc aggtccgttc aggtttttgt gctggcacaa
     1501 ccttagcgcg catttcgtgc gatgctcgcc cgaattgcag agaatgcaac acattaccgc
     1561 gaagttaacg acaacccgcg ggaattccgg ttgaaattcc tgtccgcccc ttggctccgg
     1621 cgttcgatca cgcgccggtc ggagaggccg tccgattcgc cgattccggc ggagcggccg
     1681 tcgtttcccg caccatcagc ctgggctgca accgcgtgat ggcaggcgcc gcgtgcccgg
     1741 cgatccgggc caggacgatt cgtgcggcct cccggcccag ggcgcgtttc ggctggcgga
     1801 tggtggtcag cgccggcgtc agatgcgagg ccaggtcgat atcgtcgaag ccgatcagcg
     1861 acaggtcggc gggcacccgg taaccggccc ggatcagacc tgactgaaag gcgcaggcca
     1921 tctcgtccga aaatgcgaag acggcggtcg ggcggctatg cgccggcatc gcgatccagt
     1981 cgcgcgccgc gccccggccc gcctgcaggc tgaaatcgcc cggaaacagc gtgatcccgg
     2041 cattccgcgc ctcttgcatg gcgccgtcca gccgggcctt gtgcagcaca ttgtcgggcg
     2101 gcccgccgat caggccgatg cggtcgtgac ccagctcgcg cagatgcgcg acagccagcc
     2161 gcgcgccctg tcgattgtcc agcaccaccc gtggcagatc cgcgccctcg atccattcgc
     2221 aggccgtgac cacgggcggc agccccgccc cgccggtcag atcggcatgg ggcaccagcc
     2281 cgtccagcag aatgatgcca tcggcgcggg acggatccag aaaggcgcgc agatcgcggt
     2341 gacggccgct ttcgtccagc gtgtcggcga ccagcagatc atagcccgcc gccgccagtt
     2401 cgcgccccat cccgtcgagg atcttggcga agaaagggtt gccgaggttg ggcaccagcg
     2461 ccacgacgct gcccgtgcgc tgcttgcgca ggttgcgggc ggcatggttc agccggtatc
     2521 cggtcgcggc cacagcctcg gccacgcggg tccgcgtcgg ctcggccacc agatcgggcc
     2581 gcgagagaac ccgactgacg gtcgaggccg acacccccgc aagccgcgcc acatccgaca
     2641 attttgcccg ccccggcgga ttggcctcgt gatccatcgc gaaagggtat gcgccaccgc
     2701 gcggcgccgc aagaaaatgt ttgcaatcga ttgcagggcc gtgcaggctg accatgtgga
     2761 agggggagcc atgcagacga tcaagggacc ggcgctgttt ctggcgcagt tcatcggcga
     2821 agccgcgccg ttcgacacct gggacgggat cacccgctgg gccgccggtt gcggctatct
     2881 gggcgtgcag gtgccaacca gcgatccgcg cattctggat ctggaccggg ccgaatcctc
     2941 gcaggattac cgcgacgaat tcctgggcac cgcgcgcgaa aacggggtcg aggtgacaga
     3001 gctttcgacc catctgcaag gtcagctggt ggcggtccac cccgcctatg acgccggttt
     3061 cgacgccttc gcgccccctg gcctgcgcgg cgatcccgcc gcgcggcagg aatgggcggt
     3121 cgatcagata ggccgcgcga tccgggtcag ccggcttctg ggcctggacc ggatggccac
     3181 cttttccggt gccctggcct ggccctatct ctacccctgg ccgcagcgtg cccccggact
     3241 ggtcgaggcc gccttcgaca cgctggcggc ccgctggcag cccctgctgg atctggccga
     3301 ggatcacggc gtcgacatct gctacgagat ccatcccggc gaagatctgc atgacggcat
     3361 caccttcgag atgtttctcg accgcgtgaa ggatcacggt cgcgccaaca tgctgttcga
     3421 tccgtcccac taccttctgc aacagctcga ttaccttcag aacatcgaca tctatcgcga
     3481 ccggatccgg atgttccacg tcaaggatgc cgaatttcgc ccgaccgggc ggcagggcgt
     3541 ttacggcggt ttccagtcct gggccgatcg ggcgggccgg ttccgcagcc tcggcgacgg
     3601 gcaggtcgag ttcggggcga tcttctcgaa gctgacgcaa tacggctttg acggatgggc
     3661 cgtggtcgaa tgggaatgtg cactgaagca ccccgaggac ggggcccgcg aaggcgcagc
     3721 cttcgtgcgc gaccacatca tccgggtgac gccccatgcc ttcgacgatt tcgcggcatc
     3781 cggcgtggac cgcgccgcca tcgacaaggc gcttggatta tgaggccgat ccggctgggc
     3841 atggtcggtg gcggcagcgg cgccttcatc ggcgcgatcc accgcatcgc ggcgcggatg
     3901 gacgggcatt tcacgctcgt ggccggggcg ctgtcctcgg aacccggccg ggcgcaggcc
     3961 agcgcggcgg aactgggcgt gcggggctat gacgacttcg gcgcgatggc ccgcgacgag
     4021 gccgcgcgcg aagacgggat cgaggccgtg gcgatcgtca ccccgaacca catgcacgca
     4081 gcccccgccg cagccttcct gaacgcgggc atccacgtca tctgcgacaa gccgctggcc
     4141 gccactcggg gtcaggccgc cgagatcgaa gccgccgcca agtcaggcac cgcccgcttc
     4201 ttcctgaccc acaattacag cgccctgcca atgattcgcg aggcccgcgc gatggtggcc
     4261 gagggcgcca ttggcgatct gcggctggtg caggcggaat atctgcaagg ctggctgtct
     4321 ggaccggcgc ggggcaaaca ggccgaatgg cgcaccgatc cggttcgcgc gggcgccggc
     4381 gcgcttggcg atatcggcac ccatgcctgg caactggccg cgttcgtgac cggccagacg
     4441 cccgaccgcc tgtcggccga tctgtccagc atcgtgccgg gccggcccat cgacgacgat
     4501 gcccggatcg ccctgcgcta tggctcgggg gccaagggcg gaatctgggc cagccaggtc
     4561 gcgatcgggc aggagaacgg gctgtcgctg cgtcttttcg gcaccgaagg cgcgctggca
     4621 tggcgcctgc ccgatcccga gcggctgatc ttcacgccca gggacgatgc cccccgcatc
     4681 ctgacccgcg cgcaggatcg cagcgcatcc ttccgcacgc cacccggcca tcccgaagga
     4741 tacctggaag gattcgccaa tctttacagc gatatcgcgg cgatcatccg gggagacacg
     4801 acgcatctgg accgcgtgcc gggccttgaa gccggcctgt cgggaatggc cttcatcgcg
     4861 gcggcgcagg aatcctcggc ccgcgacggg gcttggatca gggtggcgga atgacggtgc
     4921 tggcccttca ggatgtctcc agacgtttcg gcccgatcga ggtgctgcac cacgtcgatc
     4981 tggcgcttga accgggtcag gtccatgccc tgatcggcga gaatggcgcc ggcaagtcca
//
LOCUS       DTVW01000136            2820 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1188285, whole
            genome shotgun sequence.
ACCESSION   DTVW01000136 DTVW01000000
VERSION     DTVW01000136.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2820)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2820)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2820
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1188285"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..255
                     /locus_tag="EYO87_01790"
     CDS             <1..255
                     /locus_tag="EYO87_01790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_354385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlgE"
                     /protein_id="HIC64733.1"
                     /translation="PNPNGLISLDGQAFKISPTSGNFFLWDAGDGPSGSVEGYAREAS
                     TTDVAEELTYLISTQRAYSSNAKIIQTVDEMLQETTNIKR"
     gene            290..1747
                     /gene="flgK"
                     /locus_tag="EYO87_01795"
     CDS             290..1747
                     /gene="flgK"
                     /locus_tag="EYO87_01795"
                     /inference="COORDINATES: protein motif:HMM:PRK07521.1-4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-associated protein FlgK"
                     /protein_id="HIC64734.1"
                     /translation="MSIARALSNAMSGLTATARGTETVAANMANAMTPGYARRELAVS
                     VQTLGGNGGGVRLDGVTRVVNASLVAESRLAGSASAEAGIRLNFQSAMEKLVGLPGET
                     GALATLLGDFRTALQSASARPDDEIRLGQVVIAADRLTKGLNAASNQVQKSRQMADQA
                     IAADVATLSASLERVAYLNRRISILESNGSDPLSLIDERALVVDQISKIVPIQEVARE
                     AGKIALFTIEGAVLLDGTTPTELSFTDSGELTADSVVGSGSVTRLFENGQELSASQMR
                     PFAGGSLSANFAIRDDLAPQLQQELDALAFELHERLADPSVDPSITATDPGLFTDAGS
                     RADVASVAGLAARLQLNDSVRPESGGALWRIRSGAGAVSSSAVGDSTYLNALANALEA
                     VGAPLAGSGFDGNASFAARLASVESRVATRRVNAEADAAVRNSRAETISSRLMADGVD
                     SDAEMQRLLEYEQAYAANARVIQAINEMMDQILRL"
     gene            1750..2763
                     /locus_tag="EYO87_01800"
     CDS             1750..2763
                     /locus_tag="EYO87_01800"
                     /inference="COORDINATES: protein motif:HMM:PF00700.19"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64735.1"
                     /translation="MNVNSLGDQARAFALQAASNRIKTTLATLSDELSSGEVKDLSGR
                     LGGNTRVLNDIESRLSMAAQYSRNAREAASLTQGMQDALVSTNDMSVALSSALLSDAG
                     NATVTTLAAHAADAAGVFESTVARFNGAVAGRYFFAGTNTDQPPLMAAGQILDQLETV
                     VSGLNTAGDVTAAVAAWFDAAPGAGGFSDLAYSGSVDEAQNIAIAEDSSIVLRTTVLS
                     PALRDQLKGLATAALLDRGVLAGDHAERSALLQNATTAIVSNRDSLLSEMARIGLNQQ
                     LVERAQSETSAVEATLTSARNQIRQADPYQTAAAITEAQSQLQTLYAVTARLSKLRLV
                     DFL"
BASE COUNT          533 a          820 c          907 g          560 t
ORIGIN      
        1 cccaacccca atgggctcat ttcactcgac ggccaggcgt tcaagatttc tccgacctcg
       61 ggtaatttct tcctgtggga tgccggcgat gggccgagcg gatcggtcga gggctatgcg
      121 cgcgaggctt cgacgacgga tgtggccgaa gaactgacct atctgatctc gacccagcgg
      181 gcctattcgt cgaacgcgaa gatcattcag accgtggacg agatgctgca ggaaaccacg
      241 aatatcaaac gctgacccgg aaggcggcat ctggccaagg agaccggaga tgagtatcgc
      301 aagggcgctt tcgaacgcga tgtcggggct gacggcgacg gcacgcggga ccgaaacggt
      361 cgccgccaac atggcgaacg cgatgacgcc cggatatgct aggcgcgagc ttgccgtttc
      421 cgttcagacc ctgggcggca atggcggtgg tgtccgcctg gacggtgtga cccgcgtcgt
      481 caatgccagc cttgtcgccg agtcgcgcct tgccggatcg gccagcgccg aggccgggat
      541 tcgcttgaat ttccagtccg cgatggaaaa gctggtcggc ctgccgggtg aaaccggcgc
      601 tttggcgacc ctgctgggcg atttccgcac ggcactgcaa tcggcgtccg ctcgtcccga
      661 tgatgagatt cggctgggcc aggtcgtcat cgcggcggat cgtcttacga agggtttgaa
      721 cgccgcttca aaccaggttc agaagtcgcg ccagatggcc gaccaggcta tcgccgcaga
      781 tgtcgcgacc ctgagcgcct ctctcgagcg ggtcgcatat ctgaaccggc gcatttcgat
      841 cctggaatcg aacggctccg accccttgtc tctgattgac gaaagggcct tggtcgtcga
      901 ccaaatctcg aagatcgtgc cgattcagga agtcgcgcgc gaggcgggca agatcgcatt
      961 gtttaccatt gaaggggcgg tcctgctgga cggaaccaca ccgaccgagc tctcctttac
     1021 agattcaggc gaactgaccg ctgacagcgt ggttggaagt ggctcggtca cgcgactgtt
     1081 cgagaatggt caggaattgt cagccagcca gatgcgccct ttcgccggtg gttcgctgtc
     1141 ggcgaatttc gccatccgcg acgatctggc gcctcagctt cagcaagagc tggacgctct
     1201 ggccttcgaa ttgcacgagc gactggcgga tccatccgtg gatccttcca tcacggcgac
     1261 tgatcccggc ctttttaccg atgcaggatc gcgagcggac gtggcatcgg tcgccggact
     1321 tgccgcccgg ctgcagttga acgattcggt caggccggaa agcggtggcg cattgtggcg
     1381 catccgctct ggcgcgggcg ctgtttccag ttccgccgtg ggggattcaa cctatctcaa
     1441 cgcgctcgcc aacgcgcttg aggcggtcgg cgcaccgctt gcgggcagcg gcttcgacgg
     1501 caatgccagt ttcgcggcgc ggctcgccag tgtcgaatcg cgggtcgcca cgcgccgagt
     1561 aaatgcggaa gcagacgctg cggtccgcaa ttcccgtgct gaaacgattt cctcgcgctt
     1621 gatggccgat ggcgtggaca gcgacgcgga aatgcagcgc ctcttggaat acgaacaggc
     1681 ctatgcggcg aacgcccgcg tgatccaggc aatcaacgag atgatggacc aaattctgag
     1741 gctttgacca tgaacgtgaa ttctttgggt gatcaggcac gcgcctttgc gttgcaggcc
     1801 gcctcgaacc ggatcaagac aacgcttgcg acgctcagcg atgaattgtc cagcggcgag
     1861 gtcaaggatt tgtccggccg tttgggcggg aatacgcgcg ttctgaacga catcgaatcg
     1921 cgattgtcga tggcggcgca atacagccgg aacgcgaggg aagcggcatc actgacccaa
     1981 gggatgcagg acgcgctggt ttccacgaac gacatgtcgg ttgccttgtc gtcggcgctt
     2041 ttgtccgatg ccggcaatgc gaccgtcacg accctcgctg ctcatgcggc tgacgcggcc
     2101 ggcgttttcg aatcgaccgt tgcgcgtttc aacggggccg tggctggacg ctatttcttc
     2161 gcgggtacga ataccgatca gccgccgctg atggcggccg gacagattct ggaccaactt
     2221 gagacggttg tttcggggtt gaataccgca ggcgatgtga ctgctgccgt tgcagcctgg
     2281 tttgatgcgg cgccgggtgc agggggtttt tccgacttgg cctattccgg aagcgtggac
     2341 gaagcgcaga acatcgcgat tgcggaagat agcagcatcg tgctgcggac cacggtgctg
     2401 tctccggccc tgcgcgacca gttgaagggt ttggcaaccg cggcgcttct ggatcgtggt
     2461 gtcctggcgg gtgatcacgc ggaaagaagc gcattgttgc aaaacgcgac caccgcgatc
     2521 gtttccaatc gcgattctct gctgtcagaa atggcgagaa tcggattgaa ccagcaattg
     2581 gtcgagcgtg cgcagagcga gacttcagcg gtcgaggcta cgctgaccag cgcccgcaac
     2641 cagatcagac aggccgatcc ctatcagacc gctgcggcaa tcaccgaggc ccagagccag
     2701 cttcaaacgc tctatgcggt gactgcgagg ctgtcaaaac tcagattggt ggatttcctg
     2761 tgaaacgact gatatcattt gtctgttcgc ttgtcatgct ggtgcccctg atcgcagggg
//
LOCUS       DTVW01000137            3346 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1188627, whole
            genome shotgun sequence.
ACCESSION   DTVW01000137 DTVW01000000
VERSION     DTVW01000137.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3346)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3346)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3346
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1188627"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..823
                     /locus_tag="EYO87_01805"
     CDS             <1..823
                     /locus_tag="EYO87_01805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009819369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="pyruvate, phosphate dikinase"
                     /protein_id="HIC64736.1"
                     /translation="FEIMAGLPVTIRLFDPPLHEFLPHDREGLRELAESLDLPLSDVT
                     RRVEALSEFNPMLGMRGVRLGITVPEIYDMQARAIFEATVEASRKGAPVVPEIMVPLV
                     SAMREVELVKTRVDAVAAAVRNERRSDFTYRLGVMVETPRAALRAGDIAAHAAFLSFG
                     TNDLTQMTYGLSRDDAGRFMGIYVGQGVYAEDPFHFLDNEGVGELLLVGARRARQQRP
                     GITIAVCGEHGGNPESIDFCAEAQFDYVSCSPFRVPVARLAAAQSAINSRLRDKT"
     gene            1282..1776
                     /locus_tag="EYO87_01810"
     CDS             1282..1776
                     /locus_tag="EYO87_01810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011746887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell wall hydrolase"
                     /protein_id="HIC64737.1"
                     /translation="MDLPRRKPLLYSDAEPAKVKAAPDQIFLAKATPRYSNRDLGCLA
                     EALYFEARGEGAKGQAAVAEVILNRVDSGAFPSTVCDVVNQPSQFSYTIGGRKAIGNK
                     SAYMRARQIAEAALAGAPRVLTKGATYFHTPAVRPAWSRRFQRTVQIGRHIFYRTGQR
                     VASN"
     gene            1846..2628
                     /locus_tag="EYO87_01815"
     CDS             1846..2628
                     /locus_tag="EYO87_01815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin aldolase"
                     /protein_id="HIC64738.1"
                     /translation="MDQPDRIHLRDHVVSAEIGAFQSERGRDQRLRFDVAVDLASPVS
                     GAEDQVDRILSYDLLVQAIDTALCDQRYNLVETLAERIAAAILVHPQAARVRVTVEKL
                     DRGPGALGITISRDAGRVAVAERVMPVRLLIWRRPAALPEGALLILPDAPGLPLPEGG
                     DRRRIALLAMDQAAWALAGRLGLDVAETRTEIDHAIRLGQAVVWAPSRLACDAPEAGE
                     NVESLGFWLARRLDAARIDFAQDTPLPVAPAGLRAATGRAER"
     gene            2628..>3346
                     /gene="folP"
                     /locus_tag="EYO87_01820"
     CDS             2628..>3346
                     /gene="folP"
                     /locus_tag="EYO87_01820"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011746889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HIC64739.1"
                     /translation="MRDDRRYHRPLPCPHGRHRLAGGWVRFSKVEILRRGQPPRISDA
                     IPDDVLETLTRPRATLVGLAMDRPHLMGIVNATPDSFSDGGAYDPVIQARALAAEGAA
                     ILDIGGESTRPGATSVPAADEAARILPAIRALADRIPISVDTRKASVAQAALQAGAVI
                     VNDVSGFDFDPALPGVVAAAGVPVCLMHAQGLPETMQHDPRYDDVLLDVYDALEARMA
                     RAVSAGIPAHRIVIDPGIGFG"
BASE COUNT          511 a         1118 c         1119 g          598 t
ORIGIN      
        1 gttcgagatc atggccggcc tgcccgtcac tatccgcctg ttcgaccctc cgctgcacga
       61 attcctgccc cacgaccgcg agggcttgcg cgaactggcc gaatcgctgg atctgccgct
      121 ttcggacgtg accaggcgcg tcgaggcgct gtcggaattc aaccctatgc tgggcatgcg
      181 gggggtccgt ctgggcatca ccgttcccga aatctacgac atgcaggccc gtgccatctt
      241 cgaggccacc gtcgaggcca gccgcaaggg cgcgcccgtg gttcccgaaa tcatggttcc
      301 gctggtctcg gccatgcgcg aggtggaact ggtcaagacc cgtgtcgatg cagtcgccgc
      361 cgcggtgcgc aacgaacgtc gcagcgattt cacctatcgc ctgggcgtga tggtcgaaac
      421 gccgcgcgcc gcgctgcggg cgggagacat cgccgcccat gccgccttcc tgtccttcgg
      481 cacgaatgat ctgacgcaga tgacctatgg cctgtcgcgc gacgatgccg ggcgcttcat
      541 gggcatctat gtcggccaag gcgtctatgc cgaggatccg tttcactttc tcgacaacga
      601 gggcgtgggc gaattgcttc tggtcggcgc ccggcgggcc cggcagcaac ggccggggat
      661 cacgatcgcg gtctgcggcg aacatggcgg caaccctgaa tccatcgatt tctgcgccga
      721 ggcgcagttc gactatgtct cctgctcacc cttccgggtg cccgtcgcgc gactggccgc
      781 cgcccagtcc gcaatcaatt cacggctgcg cgacaagacc tgagcgcggt tttggccgga
      841 tgccggtgat tcgtcgcctc gcgccgaaaa tctcaaccgc aagttgttga aactgcgtcc
      901 gaaacggacc caatttttcc gcgctctgcc gaaactcgcc ggttcagcag aaaggcgtcg
      961 gcgggatttc gcccgaaacg gggataacac gccccggaac gcgggacttg catatgtgtc
     1021 atggaaagat cgttccggaa aattctagtc acttcctggt tctcttgcgt ccgtcacctg
     1081 ctcgcgatgc ggcgcgattt aagaccctgt caacgcgacc cgtttatagg aacgacaatg
     1141 accatgctgc catcgcggct ggcactcatc tgcctgggtg ccgcctcagc aatttccttt
     1201 gtctcgcaat ccgcccaggc cggcggcaat gcctcgctgt tttctgccgg agccggaatc
     1261 ttttcggcgg cgcagagccc catggatttg ccgcgccgga aaccgctgct ctattccgat
     1321 gccgagcccg cgaaggtcaa ggccgcgccg gaccagatat tccttgccaa ggccacgcca
     1381 cgctattcca accgcgatct gggctgtctg gccgaggccc tgtatttcga ggcgcggggc
     1441 gaaggggcca agggtcaggc cgccgtggcc gaggtgatcc tgaaccgcgt tgacagcggc
     1501 gccttcccct cgaccgtctg cgacgtcgtc aaccagccca gccagttcag ctatacgatc
     1561 ggcggacgca aggcgatcgg caacaagagc gcgtatatgc gcgcccgcca gatcgccgag
     1621 gcggctctgg cgggggcgcc gcgggtgctg accaagggcg cgacctattt ccatacgcct
     1681 gcggttcgtc cggcctggtc caggcgtttc cagcgcaccg tgcagatcgg tcgccacatc
     1741 ttctatcgca ccggtcagcg ggtcgcgtcg aactgatcgc gccggtcgcg ggggcgccgc
     1801 gcggacgggc ttgcggcagc gtcggatttg cggtgaatgg cggatatgga ccagcctgac
     1861 cgtatccatc tgcgcgatca tgtcgtctct gccgagatcg gcgcattcca gtccgaacgc
     1921 ggccgcgacc agcggttgcg ctttgatgtc gccgtcgatc ttgcatcccc ggtcagcggg
     1981 gccgaggatc aggtggaccg gatcctgtcc tatgatcttc tggttcaagc gatcgacact
     2041 gccctgtgcg atcagcgata caatcttgtc gaaaccctgg ccgaacggat cgcggccgcg
     2101 attctggtcc atcctcaggc ggcgcgtgtc cgggtgaccg tggaaaagct ggaccggggg
     2161 ccgggcgccc ttggcatcac gatcagccgc gacgcgggcc gggtcgccgt tgcggaacgc
     2221 gtcatgccgg tgcggcttct gatctggcgc cggcccgctg cgctgcccga aggtgccctg
     2281 ctgatcctgc ccgatgcgcc cggcctgccg ctgcccgagg gcggggaccg gcggcgcatc
     2341 gcgcttctgg cgatggatca ggcggcctgg gcgctggccg ggcggctggg tctggacgtc
     2401 gccgagacgc gaaccgagat cgatcacgcg atccgccttg gccaagccgt cgtctgggcc
     2461 ccgagccgtc tggcctgtga cgcgcccgag gccggcgaga acgtcgaaag cctgggtttc
     2521 tggctggcgc ggcggctgga tgccgcaagg atcgactttg cccaggacac gccgctgccg
     2581 gtcgcgcccg cgggcctgag ggcggcgacg ggacgggcgg aacgctgatg agggacgacc
     2641 gccgctatca tcgacccctg ccctgcccgc atggccggca caggctggcc gggggctggg
     2701 tccgtttttc caaagtcgag atcctgcgcc gcgggcagcc gccccggatc agcgatgcca
     2761 tccccgatga tgtgctcgag acgctgacgc gcccgcgcgc gacgctggtt ggcctggcca
     2821 tggatcggcc gcatctcatg gggatcgtga acgcgacgcc cgacagtttc tcggatggtg
     2881 gcgcctatga tccggtcata caggcgcggg ccctggcggc ggagggggcc gcgatcctcg
     2941 atatcggcgg tgaatcgacg cgccccggcg cgacctcggt tcccgcggcc gacgaagccg
     3001 cccgcatcct gcccgcgatc cgcgcccttg cggaccggat cccgatctcg gtcgacactc
     3061 gcaaggccag cgtggcgcag gcggcgttgc aggccggggc ggttatcgtc aacgacgtgt
     3121 ccggctttga cttcgatccc gccctgcccg gcgtggtggc cgcggcaggg gttccggtct
     3181 gcctgatgca tgcccagggg ctgccggaaa ccatgcagca cgatccgcgc tatgacgacg
     3241 tgctgctgga cgtctatgac gcgctggagg cgcggatggc gcgggcggtt tcggcgggaa
     3301 tccccgccca tcggatcgtg atcgatccgg gaatcggatt cggcaa
//
LOCUS       DTVW01000138            5187 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1190272, whole
            genome shotgun sequence.
ACCESSION   DTVW01000138 DTVW01000000
VERSION     DTVW01000138.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 5187)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5187)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5187
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1190272"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..667
                     /locus_tag="EYO87_01825"
     CDS             <1..667
                     /locus_tag="EYO87_01825"
                     /inference="COORDINATES: protein motif:HMM:PF11964.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64740.1"
                     /translation="EDRLIPLVRKMERKHGKLRLLMQLGPDFETYTTGAMWDDARLGL
                     THWRSFEKVAVVSDIGWITRSVEMFAPLMPGEVAVFPGDAMQAATSWITEGAGSAKPE
                     KSESGKTAQDSAAPGKSSTRSQRATRPDAAKSAAAKEAAGSTGKTASARPAAGRKAAA
                     SRTAAKKTVAKPGSAKPLASDSASGKAGASSGATNGKAATKKRGSAARPARKPAAPSR
                     PKA"
     gene            931..1959
                     /locus_tag="EYO87_01830"
     CDS             931..1959
                     /locus_tag="EYO87_01830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64741.1"
                     /translation="MPDVNKRTFRSITPKRIVALGGAAAMVIGTPLMAQAERIEGRSS
                     YVIAQAEGEGEGGAAEAPVNAEGEGEASAAEGEGKGAEGEGEGGSVAAEGEGEAAASE
                     GEGEAAASEGEGEAAASEGEGGGEGEGEGGGAAIDPDVAFLTDLGFMEGHLRAGLALY
                     EAGDLSAAKTHMGHPIEEKYEAVAKRLDQLGYGDLREQISALAAAAEAEDSYEKIAEM
                     FGKVRQTHEEVRTNFDAADQLKSFAALTRVAADEYAIAVEGGTLANVKEYHDAWGFMR
                     VIEAEAGELAASDDAKASDAAAAIVEQVEAAGSAFGDLQGQGDYEKDPSILYAAAARM
                     ELASLGAE"
     gene            1964..2623
                     /locus_tag="EYO87_01835"
     CDS             1964..2623
                     /locus_tag="EYO87_01835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe2+-dependent dioxygenase"
                     /protein_id="HIC64742.1"
                     /translation="MMIVIGNALDTHETAALREAAEKLEYEDGKRTAGRYARNVKSNL
                     QAVASPGLETIFTKVRDTLNGNEVFRSAARPKKFARLLLSRYRGGMTYGTHVDDPVMM
                     GSRTDLSFTLALSDPGEYDGGELVMEDAVEERGVRLAAGDLVLYPTSALHRVEPVTRG
                     ERMAIVGWVTSWVRDPARREILFDLDAAAKAIFDEQGKSPAFDRVFKAKANLSRMWYD
                     D"
     gene            complement(2754..4028)
                     /locus_tag="EYO87_01840"
     CDS             complement(2754..4028)
                     /locus_tag="EYO87_01840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010395826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetylornithine
                     deacetylase/succinyl-diaminopimelate desuccinylase family
                     protein"
                     /protein_id="HIC64743.1"
                     /translation="MNSLKSAIEARRDDLIALTQDLIRIPTLNPPGRHYRDICDYLRA
                     RMAPQGWDCELIRAKGSPGDSDTYPRWNMIARKAGATPGECVHFNGHHDVVEVGHGWS
                     RDPFGGELDGDRIYGRGSCDMKGGLAASIIAAEAFVATHPDFAGSIEISATADEESGG
                     YGGVAYLAERGAFAHVDHVIIPEPLHKDRICLGHRGVWWAEIETHGRIAHGSMPFLGD
                     CAVRHMGAVLAEMEAALWPLLAGKHTAMPVIPEGARSSTLNLNAIHGGAPEPEDGYTG
                     LPAPCVPDRCRITIDRRFLIEEDLAEVKAEITALLDRVKARRPGFRYEIRDLFEVVPS
                     MTDKDAPIVTSTAAAIGRVLGREADYVVSPGTYDQKHIDRIGKLKNCIAYGPGVLDLA
                     HQPDEWIGVQDMIDSARIMALVLEDLLTSVER"
     gene            4258..4539
                     /locus_tag="EYO87_01845"
     CDS             4258..4539
                     /locus_tag="EYO87_01845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010395824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64744.1"
                     /translation="MIAFFRLIVLVLLLEAMFYLLLRLYIRSLRRERLENIWAERHPD
                     MAGDRAARGKFVRKSMVGFDKSLRSRLLWLVFIIPTLTIMGIVYWINWQ"
     gene            4554..>5187
                     /locus_tag="EYO87_01850"
     CDS             4554..>5187
                     /locus_tag="EYO87_01850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011750129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1523 family protein"
                     /protein_id="HIC64745.1"
                     /translation="MHYVKVVLGVLLGIVVFLFLDYALPSKNTVRITNTYNRLTPVTS
                     SNAIFYAAQDTGTVQNASGQRDVRFIETVRPNGKVFVYRNEDTGWIWPPYFKYDSANL
                     HAEATNLRSGKADPQWVSVTAYGWRIPWLTAYPHAIAIDTLANPNDRPRNWGAMIISA
                     VLLIFLVLIWRMWAQFRERTLDPAIRSADGRWDRTTDRVTSDAAGARGRLS"
BASE COUNT          948 a         1625 c         1757 g          857 t
ORIGIN      
        1 cgaggatcgg ctgatcccgc tggtgcgcaa gatggaacgg aaacatggaa agctgcggct
       61 gctgatgcag cttggcccgg atttcgaaac ctatacgacc ggcgcgatgt gggacgacgc
      121 gcggctgggc ctgacccatt ggcgcagttt tgaaaaggtc gcggtggtca gcgatatcgg
      181 ctggatcacc cgatcggtgg aaatgttcgc gccgctgatg ccgggcgagg ttgcggtctt
      241 tcccggcgac gcgatgcagg cggcgacttc gtggatcacc gaaggcgcgg ggtcggcgaa
      301 acccgagaaa tccgaatccg gaaagactgc gcaggacagt gccgcgcccg ggaaatcctc
      361 gacccgcagc cagcgggcga caaggccgga cgcggcgaag tccgctgcgg cgaaagaggc
      421 cgcgggatcg accggcaaga cggcttcggc aaggcccgcg gccgggcgga aagcggccgc
      481 atcccgaacc gccgcgaaaa aaaccgtcgc gaagccggga tcggcgaaac ccctggccag
      541 cgactccgca tccgggaagg ccggggcaag ctctggcgcc accaatggca aggcggccac
      601 gaaaaaacgc ggctccgccg caagaccggc gcgcaagccc gccgccccga gcaggccgaa
      661 agcctagcct ttcagccgcc gcctgtgccg gtgcgtcgct tcggcggccg ccttcacttg
      721 cctctgcgat ctgtcccggc cttggattgc acgatccctt tccggtcgcg tcagcttgcc
      781 cgcaagggga aaggcgcctg atccccggca gggcgtgccg gtgcgtgcaa ggcgctggcg
      841 gcgctgcctt tccgcttcgc cgacatcgcg cattgacagg ttcagaaact tccctgataa
      901 cgcgtcgaaa gttgagtaaa ggagtcggat atgcctgacg tgaacaaacg gacctttcgg
      961 agcatcaccc ccaagcggat cgtcgccctg ggcggcgccg cggccatggt catcggcacg
     1021 ccgctgatgg cccaggcaga gcggatcgag ggccgctcga gctatgtcat cgcgcaagcc
     1081 gagggcgaag gagagggggg cgcggccgaa gcgccggtca atgccgaggg cgagggtgaa
     1141 gcgtcagccg ccgaaggcga gggcaagggc gccgagggcg aaggcgaggg gggatcggtt
     1201 gccgccgaag gcgagggtga agccgctgct tccgaaggcg agggtgaagc tgccgcttcc
     1261 gagggcgagg gtgaagccgc cgcttccgaa ggcgaaggag gcggcgaggg cgagggtgaa
     1321 ggcggcggcg ccgcaatcga tcccgatgtc gcctttctga ccgatctcgg cttcatggaa
     1381 ggccatctgc gcgcggggct tgcgctgtac gaggcgggcg atctgtcggc ggcaaagacg
     1441 catatgggcc atccgatcga agagaagtac gaagccgtcg ccaagcggct tgaccaactg
     1501 ggatatggcg atctgcggga acagatctcg gcgcttgccg cagcggccga ggcggaagat
     1561 tcctatgaga agattgcgga aatgttcggc aaggtgcgcc agacgcatga agaggtccgg
     1621 acgaatttcg acgcggctga tcagttgaaa tcctttgcgg cgctgacccg tgtcgcggcc
     1681 gacgaatacg caatagcggt cgaaggcgga acactggcga atgtaaagga ataccatgat
     1741 gcctggggct tcatgcgggt gatcgaggcc gaggcaggcg aacttgcggc aagcgacgac
     1801 gccaaggcgt cggatgcggc ggcggcgatc gtggaacagg tcgaggcggc aggttccgcg
     1861 ttcggtgatc tgcagggaca gggagattac gaaaaggatc cgtccattct ctacgcggca
     1921 gcggcaagaa tggaactggc ctccctcggg gcagagtgaa tccatgatga tcgtcatcgg
     1981 aaacgccctt gacacccacg aaacggcggc cttgcgagag gccgccgaga agctcgaata
     2041 cgaggatgga aagcgcaccg ccggtcgcta tgcgcgcaac gtcaagagca accttcaggc
     2101 ggtggcatcg ccgggactgg agacgatctt caccaaggtg cgcgacacgc tgaacggcaa
     2161 cgaggtgttc cgctcggcgg cgcggccgaa gaagttcgca cgccttctcc tgtcgcgcta
     2221 tcgcggcggg atgacctatg gcacccatgt ggacgatccg gtgatgatgg gcagccggac
     2281 ggatctgtcc ttcaccctcg cgctcagcga tccgggggaa tacgatggcg gcgaactggt
     2341 gatggaggac gcggtggaag aaagaggcgt ccggcttgct gccggtgatc tcgtgctcta
     2401 tccgacatcg gcgctgcacc gggtagaacc cgtgacccgc ggcgaacgga tggccatcgt
     2461 cggctgggtc accagctggg tccgcgaccc ggcacgccgt gagatcctgt tcgacctcga
     2521 cgccgccgcc aaggcgatct tcgacgaaca gggcaagtcg ccggctttcg accgggtgtt
     2581 caaggccaag gcgaacctgt cgcgcatgtg gtatgacgac tagctgtccg ataccggtct
     2641 tcgatggcga aatcctcgcg ccagagcggg ccgaggcgcg acggcaatca ttcggcaaag
     2701 gcaatgtcgg ttcgcgcccg gccgtccttc tgcggtctgg aaggcgggcg cgatcagcgt
     2761 tcgactgacg tcaacagatc ctcgagcacc agcgccatga tcctggcgct gtcgatcatg
     2821 tcctgcacgc cgatccattc gtcgggctgg tgggccagat ccagcacccc cggaccatag
     2881 gcgatgcagt tcttcaactt tccgatccgg tcgatatgct tctggtcata ggtgccgggg
     2941 ctgacgacat agtcggcttc gcggcccagc acgcgcccga tcgcggctgc ggtcgaggtc
     3001 acgatcggtg cgtccttgtc ggtcattgac ggcaccacct cgaaaaggtc gcgaatctcg
     3061 tatcgaaagc cgggccgccg cgccttgacc cgatccagca gggccgtgat ctcggccttg
     3121 acctcggcca gatcctcttc gatcagaaag cgccggtcga tggtgatgcg gcagcggtcg
     3181 ggcacgcagg gcgcgggcag gccggtatag ccgtcctccg gttcgggcgc gccaccatgg
     3241 atcgcgttga ggttcagcgt cgatgaccgc gcgccttcgg ggatcaccgg catcgcggta
     3301 tgcttgccgg ccagcagcgg ccacagcgcg gcctccatct cggccagaac ggcacccatg
     3361 tggcgcaccg cgcaatcgcc cagaaacggc atcgagccat gggcgatccg gccatgcgtc
     3421 tcgatctcgg cccaccagac gccgcgatgg cccaggcaga tgcggtcctt gtgcagcggc
     3481 tcggggatga tgacgtgatc gacatgagca aaggcacccc gttcggccag gtaggcgacg
     3541 ccgccatagc cgcccgattc ctcgtccgct gtcgcgctga tctcgatgct gcccgcgaaa
     3601 tcgggatggg tcgccacgaa ggcttcggcg gcgatgatgc tggccgccag cccgcctttc
     3661 atgtcgcagg atccgcggcc atagatcctg tcgccgtcca gttcgccccc gaaaggatcg
     3721 cgggaccagc catggccgac ctcgaccacg tcgtgatggc cgttgaaatg gacgcattcg
     3781 cccggcgttg cgcccgcctt gcgggcgatc atgttccagc gcggataggt gtcgctgtcg
     3841 ccggggctgc ctttggcacg gatcaattcg cagtcccagc cctgcggcgc catccgggcc
     3901 cgcagataat cgcagatgtc gcgatagtgt cggcccggcg ggttcagcgt cgggatgcgg
     3961 atcagatcct gcgtcaacgc gatcagatcg tcacgccgcg cctcgatggc ggatttcagc
     4021 gaattcatgg cccacaggct aggccgcgcc gcctgcgaag acaacgcccc gtcgcgacga
     4081 cgggccgggc ggagaacggc ccgccgacag gtccggcaga tgcagggccc gcgcccggaa
     4141 ccccacggcc cgatgcggcg ccttccgctg gccccgggcg cgcgcgtcgt ggtagcctga
     4201 tccggaaccg ggccgtccgt caggccgcgc cgcggggttc ggcccggaga gatatcgttg
     4261 atcgccttct tccgcctgat tgtccttgtg ctgctgctcg aggcgatgtt ctatctgctt
     4321 ctgcgacttt acatccggtc gctgcgccgc gagaggctgg agaacatctg ggccgagcgt
     4381 caccccgaca tggcgggcga tcgggccgcc cggggcaaat tcgtccgcaa atccatggtc
     4441 gggtttgaca agagcctgcg gtcgcggctc ttgtggctgg tcttcatcat cccgacattg
     4501 acgatcatgg gaatcgtcta ctggatcaac tggcaataag gggccgccgg aaaatgcatt
     4561 acgtcaaggt cgttctgggg gttctgctgg ggatcgtggt gttcctgttc ctggattatg
     4621 cgcttccgtc aaagaacact gtccggatca ccaataccta taaccggctg accccggtca
     4681 cctcgtcgaa cgcgatcttc tacgccgccc aggataccgg aacggttcag aacgcctcgg
     4741 ggcagcgcga tgtccgcttc atcgaaacgg tgcgcccgaa tggcaaggtc tttgtctatc
     4801 gcaacgagga taccggctgg atctggccgc cctatttcaa gtatgacagc gccaatcttc
     4861 atgccgaggc gaccaatctg cgatccggaa aagccgatcc gcaatgggtc agcgtgactg
     4921 cctatggctg gcgcatcccg tggttgaccg cctatcccca cgcgatcgcg atcgacacgc
     4981 tggccaatcc caatgaccgc ccgcgcaact ggggcgcgat gatcatctct gccgtcctgc
     5041 tgatcttcct tgtgctgatc tggcgcatgt gggcgcagtt ccgcgaacgg accctcgacc
     5101 cggcgatcag atccgcggat ggaaggtggg atcgtaccac cgatcgcgtc acctcggacg
     5161 ccgccggcgc gcgcgggcgc ctcagcg
//
LOCUS       DTVW01000139            2600 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1191051, whole
            genome shotgun sequence.
ACCESSION   DTVW01000139 DTVW01000000
VERSION     DTVW01000139.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2600)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2600)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2600
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1191051"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..605
                     /locus_tag="EYO87_01855"
     CDS             <1..605
                     /locus_tag="EYO87_01855"
                     /inference="COORDINATES: protein motif:HMM:PF00501.26"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="AMP-dependent synthetase"
                     /protein_id="HIC64746.1"
                     /translation="SFATINLDGTEGAIGAPVPWFDVELHDASGHVLDGAATGQIVVR
                     ERQAGLLTPGYLGDPQASAKLLKDGRLFTGDLARRDRDGHLYFLGRTTDSLRRRGENI
                     SAWEVETALAAHPDIAEIAVTGVPSQIGDHDILCHVLLREGVEYDPAALAAWSRENLP
                     RPHVPRYWKRVERFERTPSQRIRKGLLDRDITRAFDLGDR"
     gene            653..1825
                     /locus_tag="EYO87_01860"
     CDS             653..1825
                     /locus_tag="EYO87_01860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007600358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M24 family metallopeptidase"
                     /protein_id="HIC64747.1"
                     /translation="MPLFERSEFLSRLRLVKRAMADRDIDLLLVASPANQNWLTGYDG
                     WSFYTPQMVVVAADLDEPVWIGRKMDAVGAKLTAYLAAENVVPYPDRFVGSDSLHPMD
                     FVADTLIAMGLEKGRIGVETDDYYYTARWDHILRARLDKARFEDAFLLVNRCRMVKSE
                     RELTYMRQAGQIATAAQRAAFEAAEPGVRQCDVMAEVYRVTTSGLPEFGGTFPCKPPN
                     AMANEMCSAPHLSWTDDPLAEGDIFYIELGGVRHRYHSPLSRCIYLGTPPDELGRLSD
                     VIAEGLEAVLAAVRPGATCGELAEAWQRVITRHGVEKDSRIGYPVGLGYPPTWGELTA
                     SLRIGDMTVLEAGMTFHCIPSIWRESYGMTISETFAVTGTGAECFAQSPRRLLVKQ"
     gene            2043..>2600
                     /locus_tag="EYO87_01865"
     CDS             2043..>2600
                     /locus_tag="EYO87_01865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019298424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64748.1"
                     /translation="MRPSTGPKDDADEDNPGRPEVIGRAGPDLLQRVTGFDLWHLRLP
                     VVSRRDHGLGAVSGSCESVILRLTAEGGERGYGEAATWAPFTGSAEAGFAALDRYIRP
                     HVLDRPVGHVGAIMADAAGAVAHATEAKAALETALLDLCARIAGVPVWALLGGKCRDT
                     IPLSCSLADPDFEADLALVDRLAADG"
BASE COUNT          420 a          857 c          886 g          437 t
ORIGIN      
        1 ccagctttgc caccatcaac ctggacggca ccgaaggggc catcggcgcg cccgttccct
       61 ggttcgatgt cgaattgcac gatgcctcgg gccatgtcct cgacggcgcg gccaccggcc
      121 agatcgtggt gcgcgaacgt caggccgggc tgctgacgcc cggatatctc ggagatccgc
      181 aggcgagcgc gaagctgctg aaggatggcc ggttgtttac cggcgatctg gcccggcggg
      241 atcgtgacgg acatctctac tttctggggc gaacgacgga ttcgctgcgc cgccggggcg
      301 agaatatctc ggcctgggag gtcgagacgg cgctggccgc ccatcccgac atcgccgaga
      361 ttgccgtcac cggcgtgcca tcgcagatcg gggaccatga tatcctgtgc catgtgctgc
      421 tgcgcgaggg ggtcgaatac gatccggcgg cactggccgc gtggagccgc gagaacctgc
      481 cccggccgca tgtgccgcga tactggaaac gggtcgagcg cttcgaacgc acgcccagcc
      541 aacgcatccg caagggtctg ctggatcgcg acatcacgcg cgctttcgat cttggagaca
      601 gatgacaccg accggccgcc cgaaacccga atgtcgcaac aggagtcaga tcatgccgct
      661 tttcgagaga tccgagtttc tgtcgcgcct tcggctggtc aagcgcgcga tggccgaccg
      721 ggacatcgac ctgttgctgg tcgcgtcacc ggccaaccag aactggctga ccggatatga
      781 cggatggtcg ttctacacgc cgcagatggt cgttgtcgcc gcggatctgg atgaaccggt
      841 ctggatcggc cgcaagatgg atgcggtcgg cgcgaaactc accgcctatc ttgccgccga
      901 gaatgtcgtc ccctatcccg accggttcgt cggatcggac agtcttcacc cgatggactt
      961 cgtggccgac acgctgatcg cgatggggct ggagaagggc cgcatcgggg ttgaaaccga
     1021 tgattactac tacaccgcgc gttgggacca catcctgcgc gcgcgtctgg acaaggcccg
     1081 cttcgaggac gcctttctcc tggtgaaccg ctgccgcatg gtaaagtcgg agcgggagct
     1141 gacctacatg cgccaggccg ggcagatcgc gaccgcggcg caacgggccg ccttcgaggc
     1201 cgcggaaccg ggcgtgcgcc aatgcgacgt catggccgag gtctatcgcg tgacgacttc
     1261 ggggctgccg gaattcggcg gcacctttcc ctgcaagccg ccaaacgcga tggcaaacga
     1321 gatgtgttcg gccccgcatc tttcctggac ggacgatccg ctggccgagg gcgacatctt
     1381 ctacatcgag cttggcggcg ttcggcaccg atatcacagc cccctgtcgc gctgcatcta
     1441 tcttggcacg ccgcccgacg agctcgggcg cctgtcggac gtcatcgccg aggggctgga
     1501 ggctgtcctg gccgccgtcc gtcccggcgc cacatgcggc gaactggccg aggcctggca
     1561 gcgcgtgatc accaggcacg gcgtcgagaa ggacagccgg atcggctatc ccgtcggact
     1621 gggctatccg cccacctggg gcgagctgac ggccagtctg cgcatcgggg acatgaccgt
     1681 tctcgaggcc gggatgacct ttcactgcat cccctcgatc tggcgcgaga gctatggcat
     1741 gaccatttcc gaaaccttcg cggtcaccgg gacaggcgcc gagtgtttcg cgcaatcgcc
     1801 ccgccgattg ctggtgaagc aatgatgccg cccccgatga tacccccagg ggccgcgcca
     1861 agccgggaac cggcgctggc gggccgggat ggctgcggat ttcaggttga cgcatccggg
     1921 cgcgcggtct tcaaatgtcc cgcagcattc gcgcaacggg aatggtgccc cgcgaaagtg
     1981 cagcgggacg gggcacgggc cggcacggca acgcgaggtt cttggtgatg tcggacgaac
     2041 ccatgcgacc cagcaccggc ccgaaggacg acgcagacga agacaatccg ggccgcccgg
     2101 aggtcatcgg ccgggccggc cccgatcttc ttcagcgcgt caccggcttc gatctgtggc
     2161 atctgcggct gcccgtcgtc tcgcggcgcg atcacggtct tggcgcggtg tcggggtcgt
     2221 gcgaaagcgt catcctgcgc ctgacggccg agggcggcga acggggctac ggcgaagccg
     2281 ccacctgggc gccgttcacc ggctctgccg aggcaggctt tgccgcgctg gaccgctata
     2341 tccgcccgca tgtcctggat cggccggtgg gtcatgtggg cgcgatcatg gccgatgccg
     2401 cgggcgcggt cgcccatgcc acggaagcca aggccgcgct tgaaaccgcg ctgctcgatc
     2461 tttgcgcgcg gatcgccggc gtgccggtct gggcgctgct gggcggaaag tgccgcgata
     2521 cgatcccctt gtcctgctcg cttgcggacc cggatttcga ggccgatctg gcgctcgtgg
     2581 accggctggc cgcggacggc
//
LOCUS       DTVW01000140            3726 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1191742, whole
            genome shotgun sequence.
ACCESSION   DTVW01000140 DTVW01000000
VERSION     DTVW01000140.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3726)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3726)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3726
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1191742"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..397)
                     /locus_tag="EYO87_01870"
     CDS             complement(<1..397)
                     /locus_tag="EYO87_01870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009208625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme-binding protein"
                     /protein_id="HIC64749.1"
                     /translation="MDLSLDDARKMADNCLEIAAEMTLKPITVAVLDAAGDLKVLLRQ
                     DGTSTLRPDIAQGKARGAIALGMGSRAIYERAKEQPYFIQSMNALSGGSLVPVPGGVL
                     IRRDGAILGAVGITGDTSDNDEACASRAIE"
     gene            complement(462..1505)
                     /locus_tag="EYO87_01875"
     CDS             complement(462..1505)
                     /locus_tag="EYO87_01875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-idonate 5-dehydrogenase"
                     /protein_id="HIC64750.1"
                     /translation="MMQDLCCRLYAARDLRVEDGPDARPAPDEALIRVSRGGICGSDL
                     HYYHDGGFGPVRVQEPIILGHEAAGIVEAAPEGSGLVAGQIVALCPSRPCGTCGFCRA
                     GQTRHCLAMRFNGSAMRMPHEQGLFRSRIAHPVAQCLALPEGVGAGAAAGAEPLSVCL
                     HALTLAPPLAGQRVLVTGAGPIGAICVALARLRGAAGIVVTDVQDFTLDVARRMGADR
                     VVNVAETPDALADLAQGKGRIDIVLECSGNSHAIAQAIAATRPQGSIVQIGVAGTIPL
                     PLNLIVAKELRLLGSHRFDAEFAEAVAMIGAGQIELSPMVTQVLPARDAVRAFDLAGD
                     RSRAVKVHLDFEG"
     gene            complement(1502..2779)
                     /locus_tag="EYO87_01880"
     CDS             complement(1502..2779)
                     /locus_tag="EYO87_01880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease"
                     /protein_id="HIC64751.1"
                     /translation="MSLTILGLTFVLGLAIGMPVAITLGLSSMAYLLWQGMPLVVIPQ
                     KMYAGMDSFVLLSIPGFILAGNLMNGGGITSRIIRFAQAMVGWIRGGLAQTNIASSML
                     FGGISGTAVADAASIGGMMIPGMKRAGYPAAFSAAVTAASSTVGPIIPPSVPMIIVGS
                     LAGISVGKMFIAGALPGILLGVAMMATTWIIARRRDFPRQAWQGWTELGRAFLGAFWA
                     LAMTALIVGGMLSGYVTPTETAVIASIYALLVGAFVYRELPLARVPGIVIDSAVGSAG
                     ILALVGTANVFGWILVSEQIPQKIAAGVLSVTDNRFLVILLINIILLVVGMFMETIAA
                     LIILFVPLLTLAQGVGIEPLHFAVFAVLNLMIGLTTPPVGVCMFVCANIARLPLAPVI
                     RALVPYLATNIFVLLLVSYIPWISTFLPSLMDK"
     gene            complement(2776..3276)
                     /locus_tag="EYO87_01885"
     CDS             complement(2776..3276)
                     /locus_tag="EYO87_01885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease"
                     /protein_id="HIC64752.1"
                     /translation="MNAVIRLLRSLLRLGTGLAFLVLIAAVTIQVVGRTFAGSPVWTE
                     ELTRFALLYLAGFGTALALFSGDLVNVDLLSESLPGRFPWLMRLLSAALVLAFCALLI
                     GPAWRFTRIGAMQTSPALALPMNYVHGSVLVLLAMLGLAALLRLVGMVTGASDGRPEN
                     PLGGIE"
     gene            complement(3344..>3726)
                     /locus_tag="EYO87_01890"
     CDS             complement(3344..>3726)
                     /locus_tag="EYO87_01890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="C4-dicarboxylate ABC transporter"
                     /protein_id="HIC64753.1"
                     /translation="QNGTIDAQENPLALIESANFYEVQKFVNKTEHVRSWIYLTISEI
                     TWGRLSSADQEAVMQAAATAQTAEREMFTADEDRLAASLKDKGMTFVDSDKAAFAATA
                     RDAVLANIGDEIKPVVQQLFDQQA"
BASE COUNT          693 a         1310 c         1182 g          541 t
ORIGIN      
        1 cctcgatggc gcggctggcg caggcttcgt cattgtccga tgtgtcgccg gtgatgccca
       61 cggcccccag aatcgcgcca tcgcgccgga tcagcacccc gcccggaacc ggcaccagcg
      121 atccgcccga cagcgcgttc atcgactgga tgaaataggg ctgttccttt gcccgctcat
      181 agatcgcgcg cgaccccatg cccagggcga tggcgccccg cgccttgccc tgggcgatgt
      241 cggggcgcag cgtgctggtc ccgtcctgcc gcagcagcac cttcaggtct ccggccgcgt
      301 ccagaaccgc gacggtaatc ggtttcagcg tcatctcggc cgcgatttcc aggcagttat
      361 cggccatctt gcgggcatcg tccaggctca gatccatgtc gtctcctctc tcgaaatggc
      421 agtccttgcc gcccgacttc gcatatcacg accggctgtg cctagccctc gaaatcgaga
      481 tggactttca ccgcccgcga ccggtcgccc gccagatcga aggcccgaac cgcgtcgcgc
      541 gccggcaaga cctgcgtgac catgggcgac agctctatct gccccgcgcc gatcatcgcc
      601 acggcctcgg cgaattcggc gtcgaagcga tggctgccca gaaggcgcag ttccttggcc
      661 acgatcaggt tcagcggcag cggaatcgtc cctgccacgc cgatctgcac gatgctgccc
      721 tgcggccgcg tcgccgcgat cgcctgggcg atggcatggg aattgcccga acattccagc
      781 acgatgtcga tgcgcccctt gccctgggcc agatcggcca gcgcgtccgg tgtctcggcc
      841 acgttcacca cgcggtccgc ccccatccgg cgcgccacgt ccagcgtgaa atcctgcaca
      901 tcggtcacca cgatcccggc cgcgccgcgc agccgggcca gcgccacgca gatcgcgccg
      961 atggggcccg cgccggtaac cagcacccgc tggccggcaa gcggcggtgc cagggtcagg
     1021 gcatgcaggc agaccgacaa gggctcggcc ccggcagcgg cccccgcccc caccccctcg
     1081 ggcagcgcca ggcattgcgc gacgggatgg gcgatgcggc tgcgaaaaag gccctgttcg
     1141 tggggcatcc gcatggccga gccgttgaac cgcatcgcca ggcagtgccg cgtctggccc
     1201 gcccggcaga atccgcacgt cccgcagggc cgcgaggggc acagcgcgac gatctggccc
     1261 gcgaccaggc ccgacccctc gggcgcggct tcgacgatcc cggccgcctc gtggcccagg
     1321 atgatcggct cttgcacgcg gaccgggccg aagccgccat cgtggtaata atgcagatcc
     1381 gatccgcaga tcccgccgcg cgagacacgg atcagcgcct cgtccggggc gggacgggca
     1441 tcggggccat cctcgacgcg caggtcacgg gcggcgtaaa ggcggcagca caggtcttgc
     1501 atcacttgtc catcagcgag ggcaggaagg tgctgatcca cggaatgtaa gagaccagca
     1561 gcagcacgaa tatgttcgtc gccagatagg gcaccagcgc ccggatcacc ggggccagcg
     1621 gcagccgcgc gatattggcg cagacgaaca tgcagacccc caccggcggc gtggtcagcc
     1681 cgatcatcag gttcaggacg gcgaagacgg cgaaatgcag cggctcgatc cccacgccct
     1741 gcgccagcgt cagcagcggc acgaacagga tgatcagcgc cgcgatggtt tccatgaaca
     1801 tgccgacgac cagcaggatg atgttgatca gcaggatcac cagaaacctg ttatccgtca
     1861 ccgacaagac cccggcggcg atcttctgcg ggatctgttc gctgaccaga atccagccaa
     1921 agacattggc cgtccctacc agcgccagga tcccggccga tccgaccgcg ctgtcgatga
     1981 cgatgcccgg cacgcgggcc agcggcaatt cgcgatagac gaaggctccg accagcagcg
     2041 catagatcga ggcgatgacg gcggtctcgg tcggggtgac atagcccgac agcatgcccc
     2101 ccacgatcag cgcggtcatc gccagcgccc agaaggcacc cagaaaggcg cggccaagct
     2161 cggtccagcc ctgccaggcc tgccgcggaa aatcgcggcg ccgggcgatg atccaggtcg
     2221 tcgccatcat cgccacgccc agcaggattc ccggcagcgc gccggcgatg aacatcttgc
     2281 cgaccgagat cccggccagc gatccgacga tgatcatcgg caccgagggc gggatgatcg
     2341 gacccaccgt cgacgaggcg gccgtcaccg cggccgagaa cgcggccgga tagcccgcgc
     2401 gcttcattcc cggaatcatc attccgccga tcgaggcggc atcggcgacg gcggtgccgg
     2461 aaatgccgcc gaacagcatc gacgaggcga tgttggtctg cgccagtccg ccccggatcc
     2521 agccgaccat ggcctgcgcg aagcgaatga tgcggctggt gatgccgccg ccattcatca
     2581 ggtttcccgc caggatgaag cccggaatgg acagcagcac gaagctgtcc atgccggcat
     2641 acatcttttg cggaatcacc accagcggca ttccctgcca cagcagatag gccatcgagg
     2701 acaggcccag cgtgatcgcg accggcatcc cgatggccag gcccaaaacg aaggtcaggc
     2761 ccaggatcgt caggctcatt cgatccctcc cagcgggttc tcgggcctgc catcgcttgc
     2821 ccccgtcacc atgcccacca ggcgcagcag cgccgcaagg cccagcatcg ccagcagcac
     2881 cagcacgctg ccgtgaacat aattcatcgg caatgccagc gcaggcgatg tctgcatcgc
     2941 gccgatgcgg gtgaaccgcc atgccgggcc gatcagcaag gcgcaaaagg ccagcaccag
     3001 cgccgccgac agcaagcgca tcagccaggg aaaacgtccg ggaagacttt cgctgagcag
     3061 atcgacattg accagatcgc ccgagaacag cgccagcgcc gttccgaaac cggcgagata
     3121 gagcagggca aagcgggtca gttcctcggt ccagacgggc gagccggcga aggtccggcc
     3181 gacgacctga atggtgacgg cggcgatgag gaccaggaag gccagacccg tccccagtcg
     3241 cagcaaggat cgcaacaggc ggatcacggc attcatcgaa acctctcggg cccagggacg
     3301 gatggcggaa gggcgggcag ccggcactgc ccgccgcgcc ggatcaggcc tgctggtcga
     3361 acaattgctg cacgacgggt ttgatctcat cgccgatatt ggccagcacg gcatccctgg
     3421 cggtggccgc gaatgccgcc ttgtcgctgt ccacgaaggt catgcccttg tccttcaggc
     3481 tggccgccag ccgatcctcg tcggcggtga acatctcgcg ctcggcggtt tgcgcggtcg
     3541 cggccgcctg catcaccgcc tcctggtcgg cagaggacag cctgccccag gtgatctcgg
     3601 agatggtcag atagatccag gaccgcacgt gttcggtctt gttgacgaat ttctggacct
     3661 cgtagaaatt cgcggattca atcagcgcca gcgggttttc ctgcgcgtcg atcgtgccgt
     3721 tctgca
//
LOCUS       DTVW01000141            1102 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1193664, whole
            genome shotgun sequence.
ACCESSION   DTVW01000141 DTVW01000000
VERSION     DTVW01000141.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1102)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1102)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1102
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1193664"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..580)
                     /locus_tag="EYO87_01895"
     CDS             complement(<1..580)
                     /locus_tag="EYO87_01895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64754.1"
                     /translation="MRILARLIAVFCLIGLAGSLAGAWHPAGDSLAVFRPALAVALLL
                     TAPVLRGRAGLAASAVALVALAPILWDLWRPVQGPANGIVVYQKNLRFDLADPAPIIA
                     DIRASGAGIVFLEEVSWRNLAVSERLKAGLPYQLICPGDTTGAIAILSRWPLDRRDCV
                     PKSGLASARARTPMGAVSVAVLHLTWPWPYGQA"
     gene            complement(582..>1102)
                     /locus_tag="EYO87_01900"
     CDS             complement(582..>1102)
                     /locus_tag="EYO87_01900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013066474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MaoC family dehydratase"
                     /protein_id="HIC64755.1"
                     /translation="LAVPKGLDFSDYDFELAGEPHRLGDYHPGERIDHVDGVTIEEAE
                     HMLATRLWQNTAKVHFDATFRNDGRRLIYGGHVISMARALSFNGLANAQMIVALNGGA
                     HANPCFAGDTIRAWSEVLDKAETRAPGVGAIRLRLVATKGDSAAFALKGADGKYLPEV
                     LLDLDYWALMPV"
BASE COUNT          202 a          388 c          359 g          153 t
ORIGIN      
        1 ccgcctgccc gtagggccag ggccaggtca gatgcagcac cgcgaccgac accgccccca
       61 tcggggtgcg ggcgcgggcc gaggccaggc cgcttttcgg cacgcaatcc cgacgatcca
      121 gcggccagcg ggacaggatc gcgatggcgc cggtggtgtc tccgggacag atcagttgat
      181 agggaagccc ggctttcagc cgttcggaca cggcaaggtt gcgccagctg acctcttcca
      241 gaaagacgat tccggcgccg ctggcccgga tatcggcgat gatcggcgcc ggatcggcca
      301 gatcgaaacg caggttcttc tgatagacca cgatcccgtt cgccggcccc tgcaccggcc
      361 gccacagatc ccacaggatc ggcgccagcg cgaccagtgc cacggcgctt gcggccaaac
      421 cggcccgccc gcgcaggaca ggcgccgtca gcagcagcgc gacggccagc gccggacgga
      481 acacggccag cgaatccccg gccggatgcc aggccccggc aaggctgccg gccagcccga
      541 tcagacagaa taccgcgatc aggcgggcca gaatccgcat cctagaccgg catcaaggcc
      601 cagtagtcga ggtccagcag aacctcgggc agatattttc catccgcgcc cttcagcgcg
      661 aaggccgcgc tgtcgccctt ggtcgcgacc agccgcagcc ggatcgcgcc gacgcccggc
      721 gcgcgggtct cggccttgtc cagcacctcg gaccaggcgc ggatcgtgtc gcccgcaaag
      781 cagggattgg catgggcgcc gccattcagc gccacgatca tctgcgcatt ggccagcccg
      841 ttgaaggaca gggcgcgggc catcgagatg acatgcccgc catagatcag ccgccggcca
      901 tcgttgcgga aggtggcgtc gaaatgcacc ttggcggtgt tctgccacag ccgcgtggcc
      961 agcatatgtt cggcctcttc gatggtgacg ccatcgacgt ggtcgattcg ctcgcccgga
     1021 tggtaatcgc ccagacgatg cggctcgccg gccagttcga agtcgtaatc ggaaaaatcc
     1081 agacccttgg gaaccgccag ac
//
LOCUS       DTVW01000142            1296 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1193976, whole
            genome shotgun sequence.
ACCESSION   DTVW01000142 DTVW01000000
VERSION     DTVW01000142.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1296)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1296)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1296
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1193976"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..730
                     /locus_tag="EYO87_01905"
     CDS             <1..730
                     /locus_tag="EYO87_01905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010393355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="peptidase S41"
                     /protein_id="HIC64756.1"
                     /translation="VLDLRNNPGGLLNQAISVSDAFLDAGEIVSTRGRKVEDSERWNA
                     EPGDLAQGRPMVVLTNGGSASASEIVAGALQDHRRAIVVGEKTFGKGSVQTVMPVTSD
                     SAIRLTTARYYTPSGRSIQSLGIQPDILVSQPKPVPVDEQDKEGPRSQSSFGRSEADL
                     RGALNNDSISEEEKKQMEDEAAEVEATAKLRDEDYQLAYAVDILKGLAAVDFEADRVP
                     PEAKPAVTGEGSGTGKEGAAKDNG"
     gene            723..1229
                     /locus_tag="EYO87_01910"
     CDS             723..1229
                     /locus_tag="EYO87_01910"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA pyrophosphohydrolase"
                     /protein_id="HIC64757.1"
                     /translation="MVDGAYPSGPGGLPYRPCAGVVLINAAGMVFAGQRLDHPTDQPP
                     AWQMPQGGIDPGETAREAALRELAEETGIPASKVEILDETPDWVFYDLPPELLGKVWK
                     GRYGGQRQKWVLMRFLGQDSDICIETEHPEFDRWDWMRADDLLARIVPFKRNVYATVL
                     RIFCDRLA"
BASE COUNT          229 a          411 c          456 g          200 t
ORIGIN      
        1 cgttctggat ctgcgcaaca atccgggcgg tttgctgaac caggcgatca gcgtcagcga
       61 cgccttcctc gatgccggcg aaatcgtcag cacccgcggc cgcaaggtcg aggacagcga
      121 acgctggaac gcggaacccg gcgatctggc ccagggcagg ccgatggtgg tgctgaccaa
      181 tggcggttcc gccagcgcct ccgagatcgt ggccggtgcc ctgcaggacc accgccgcgc
      241 catcgtcgtg ggcgagaaga cattcggcaa gggcagcgtt cagacggtca tgccggtcac
      301 gtcggacagc gcgatccggc tgaccacggc gcgctattac acgccgtcgg ggcgctcgat
      361 ccagtcgctg ggcatccagc ccgacattct ggtttcgcag cccaagccgg tgccggtcga
      421 cgagcaggac aaggaaggcc cgcgcagcca gtctagcttc ggccgttccg aggccgatct
      481 gcgcggcgcg ctgaacaacg attcgatcag cgaagaggaa aagaagcaga tggaggacga
      541 ggccgccgag gtcgaggcca ccgccaagct gcgcgacgag gattatcagc tggcctatgc
      601 cgtggatatt ctcaagggtc tggccgccgt cgatttcgag gccgaccggg tgcccccgga
      661 agccaagccc gcagtcaccg gcgagggatc gggcaccgga aaggaaggcg cggccaagga
      721 caatggttga tggcgcctat ccatcggggc cggggggctt gccctaccgg ccctgcgcgg
      781 gcgtcgtgct gatcaacgcg gccgggatgg tctttgccgg tcagcggctg gaccatccga
      841 ccgatcagcc gcccgcttgg cagatgccgc agggcgggat cgacccgggc gaaaccgcgc
      901 gcgaggcggc gctgcgtgaa ctggccgagg aaaccggcat tcccgccagc aaggtcgaga
      961 tcctcgacga gacgccggat tgggttttct atgacctgcc gccggaattg ctgggcaagg
     1021 tctggaaggg ccgctatggc gggcagcgcc agaaatgggt tttgatgcgc tttctgggtc
     1081 aggacagcga catctgcatc gagacggagc accccgaatt cgaccgctgg gactggatgc
     1141 gcgccgacga tcttctggcc cggatcgtgc cgttcaaacg aaatgtctac gcgacggttc
     1201 tgcgcatttt ttgcgaccgg ctcgcctgaa cctgtcgttc tggccgcagg ctgcccgcgc
     1261 cgcgcggccc ttggcgggcg ggcggcgcgg gcagcc
//
LOCUS       DTVW01000143            1081 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1198238, whole
            genome shotgun sequence.
ACCESSION   DTVW01000143 DTVW01000000
VERSION     DTVW01000143.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1081)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1081)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1081
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1198238"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>1081
                     /locus_tag="EYO87_01915"
     CDS             <1..>1081
                     /locus_tag="EYO87_01915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009504378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HIC64758.1"
                     /translation="IANRGEIACRIARTARASGIIPVGVHSQADVNALHVREIGKSVC
                     IGAGPASQSYLKIDAVIAAAQSVGADAIHPGYGFLAENPDFARSVEAAGMIFMGPTPE
                     TLERFGDKASAKEAAVAASVPVISGAEGARSDPEQIAEEVRQMGLPVLLKAVGGGGGR
                     GQRLVTDETTLVEDIEGALREAKSTFGSEGLLLERFLPEARHVEVQIAGDGKGHVVHL
                     FERDCTLQRRHQKVIEEAPAWGLPRTLLDDIARDAVRLGETLDYRGLGTVEFLVAGDE
                     YFFLEVNPRIQVEHPVTEAITGLDLVALHLRIAEGAGLGLVQDDLTINGHAVEARLYA
                     EDPAMQFAPSTGTLSTLSLPSGLRID"
BASE COUNT          191 a          336 c          362 g          192 t
ORIGIN      
        1 atcgccaacc gcggcgaaat tgcctgccgg atcgcgcgca ctgcgcgggc aagcggtatc
       61 attcccgtcg gcgtgcattc gcaggccgac gtcaatgccc tgcatgtccg cgagattggc
      121 aaatctgtct gtatcggcgc cggacctgca tcccagagct atctgaaaat cgacgcggtg
      181 attgccgctg cgcaatcagt gggcgcggat gcgatccatc ccggttatgg ctttctggcc
      241 gaaaaccccg attttgctcg ttcggtcgaa gccgccggca tgatcttcat ggggccgacg
      301 ccggaaacgc ttgaacgttt cggcgacaag gccagcgcca aagaggccgc cgtggcggcc
      361 agcgtcccgg tgatttcggg cgccgaaggt gcgcggtccg atcccgagca gattgccgag
      421 gaggtgcgcc aaatgggcct gccggtgctg ctcaaggcgg tcggcggcgg tggtgggcgc
      481 ggacaacggc tcgtcactga cgagaccacg ctggtcgagg acatcgaagg cgcgctgcgc
      541 gaagcaaaat ccaccttcgg ctccgaaggg ctgctgttgg agcgtttcct gcccgaggcg
      601 cgccatgttg aagtgcagat cgcaggtgac ggcaagggcc atgtggtgca tctgttcgaa
      661 cgcgattgca cgcttcagcg ccgccaccag aaggtcatcg aggaagcccc ggcctggggt
      721 ctgccccgaa cgcttctgga cgacatcgca cgcgacgcgg tgcgcttggg cgaaacgctg
      781 gactatcgcg ggctgggcac ggtcgaattt ctggtcgcgg gggacgaata tttcttcctt
      841 gaggtgaacc cgcgcattca ggtggaacat cccgtcaccg aagcgatcac cgggctggac
      901 cttgtcgcgc ttcacctgcg gattgccgaa ggcgcgggcc ttggactggt gcaggacgat
      961 ctgacgatca acggccacgc ggtcgaggcg cggctttacg ccgaagatcc ggcgatgcaa
     1021 ttcgccccgt cgacgggcac gctctccacg ctcagcctgc catcgggcct gcgcatcgac
     1081 a
//
LOCUS       DTVW01000144            1406 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1201075, whole
            genome shotgun sequence.
ACCESSION   DTVW01000144 DTVW01000000
VERSION     DTVW01000144.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1406)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1406)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1406
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1201075"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(133..1011)
                     /gene="serB"
                     /locus_tag="EYO87_01920"
     CDS             complement(133..1011)
                     /gene="serB"
                     /locus_tag="EYO87_01920"
                     /EC_number="3.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005980335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine phosphatase SerB"
                     /protein_id="HIC64759.1"
                     /translation="MFTVSLITAPANANLESALLDGLSRSWDGGTPRWLNPGIAGEFD
                     IGTMPTDVDQVWSDLQTIGIDMAIQPGTGRRKSILLADMDSTMIGQECVDELADMAGV
                     GPRVAAITARAMNGELNFHEALVERVGLLAGLRESVVAEVLDRRITLTPGGRELVATM
                     RANGGHAALVSGGFTAFTGAVAERLGFDTHRANTLLSEAGVLTGHVALPVLGREAKVE
                     ALREIAAGLGRTPEDAIAVGDGANDLGMLQLAGTGVALHAKPVVAAQAKIRINHGDLS
                     ALLYLQGYRAAEFVGG"
     gene            complement(1273..>1406)
                     /locus_tag="EYO87_01925"
     CDS             complement(1273..>1406)
                     /locus_tag="EYO87_01925"
                     /inference="COORDINATES: protein motif:HMM:PF00589.20"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HIC64760.1"
                     /translation="GAWNNVCKRAGIQRLTLHCSRHGFATSMLHMGMDVKTVAEMGG"
BASE COUNT          214 a          497 c          446 g          249 t
ORIGIN      
        1 ggcagagcgg gcgccggccc tggcctggac cggacccaac ggggtcttcc gccgggtcgc
       61 gcaaaaccgg gcccgggcgc ggcagtcggc gatccgcggg ttttacgccg cggcggggtg
      121 tcaccctgtg cgtcagccgc cgacgaattc cgccgcgcga tagccctgca gatacagcaa
      181 tgcgctgaga tcgccgtggt tgatgcggat cttcgcctgc gccgcgacga ccggcttggc
      241 gtgcagggcc acgcccgtcc ccgccagttg cagcatcccc agatcgtttg cgccatcgcc
      301 aacggcaatc gcatcctcgg gcgtccggcc cagcccggcg gcgatctcgc gcagcgcctc
      361 gaccttggct tcgcggccca gcacgggcag cgccacatgg ccggtcagca cgccggcttc
      421 ggacagcagg gtattggcgc ggtgcgtgtc aaaacccagc ctttcggcaa ccgccccggt
      481 aaaggccgtg aacccgcccg aaaccagcgc cgcatggccg ccattggccc gcatcgtggc
      541 gaccagttcc cgcccacccg gcgtcagcgt gatgcgccgg tccaggacct cggccacgac
      601 cgattcgcgc agaccggcca gaaggccgac ccgttcgacc agcgcctcgt ggaagttcag
      661 ctcgccgttc atcgcccgcg cggtgatggc cgcgacccgc ggcccgacgc cggccatgtc
      721 ggccagttcg tccacgcatt cctgcccgat catggtcgaa tccatatcgg ccagaaggat
      781 cgacttgcgt cgcccggttc cgggctggat cgccatgtcg atgcctatgg tctgaagatc
      841 ggaccagacc tgatcgacat ccgtcggcat ggttccgata tcgaattcgc cggcaatgcc
      901 cgggttcagc cagcgcggcg tgccgccgtc ccagcttctg gacagcccgt ccagcaacgc
      961 gctttccaga ttggcgttgg caggcgctgt gatcagcgag acggtgaaca tgggctgctc
     1021 cttccgggga tcggcgaggc cgggatctag gccaaagatt tcccttgcgc cagtgccggc
     1081 ggcagttgta tgccccgcgg cgggtcaccc cgcccaacga gggtgagcag tcattccgtt
     1141 ttttcctttc ggttctgaca gttgcggaac cattgatcgc gccgcgtgtc gctggcgtgt
     1201 caaatagagc gtcggtgatg gtcttgtcct tgaccgcgtg ggcataggtt tgcagcaccg
     1261 tcgccgcgtc cttcaacctc ccatctcggc cacggtcttc acgtccattc ccatatgcag
     1321 catcgaggtt gcaaagccgt ggcggctgca atgcagtgtc agccgctgga tgcccgcccg
     1381 cttgcagacg ttgttccacg cgcccc
//
LOCUS       DTVW01000145            1145 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1201329, whole
            genome shotgun sequence.
ACCESSION   DTVW01000145 DTVW01000000
VERSION     DTVW01000145.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1145)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1145)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1145
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1201329"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..951)
                     /locus_tag="EYO87_01930"
     CDS             complement(<1..951)
                     /locus_tag="EYO87_01930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011569007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-galactosidase"
                     /protein_id="HIC64761.1"
                     /translation="MIRTWSLDDARQSLVLASRDARLPEIVYWGAPLPPDEDLAALAR
                     SGLADVTGGMLDRLPELSICPEASQSFPGEPGLIARDLQGRPLRPAFRLQGDETAEGR
                     LALSYRCAATGIGYRASFALDADTGLVAAQAEIDSDRPIILHWLAAPVFPGPQLADEM
                     LEISGRWCGEFQIATSAWRPGQRVRDNHTGRTGHEHFPGLILPDRGAAKTTGETRAFH
                     YAWSGGHRMLAEELPDGRRQIQFGHASGAEPGPGRHFRTATLYAAFSDQGSNGCAVAF
                     QRYLRARAPQARPRPVHYNCWEAVYFDHDLAALKDIASRAA"
     gene            complement(951..>1145)
                     /locus_tag="EYO87_01935"
     CDS             complement(951..>1145)
                     /locus_tag="EYO87_01935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008034060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HIC64762.1"
                     /translation="WATVLTTGAGTQPITAGLQSLNGQWVAAWQLVSAGSILAALPPV
                     AMFFLMQKHFIAGLTLGAVK"
BASE COUNT          182 a          398 c          400 g          165 t
ORIGIN      
        1 ggcggcgcgg ctggcgatgt ctttcagcgc ggccagatcg tgatcgaaat agactgcctc
       61 ccagcaatta tagtggaccg ggcgcgggcg ggcctgcggc gcgcgggcgc gcagataccg
      121 ctggaacgcc accgcgcagc cgttcgagcc ctgatccgaa aaggccgcgt aaagcgtcgc
      181 ggtgcgaaaa tgccgtcccg gccccggctc ggcgcccgaa gcgtggccga actggatctg
      241 gcggcggccg tctggcaatt cctcggccag catccggtgc ccgcccgacc aggcgtaatg
      301 gaaggcgcgg gtctcgcccg tggtcttggc ggcgccgcgg tcgggcagga tcaggccggg
      361 gaaatgttcg tgcccggtgc ggccggtatg attgtcgcgc acgcgctggc cggggcgcca
      421 ggctgacgtc gcgatctgga attcgccgca ccagcggccg gaaatttcca gcatctcgtc
      481 ggccagttgc gggcccggaa agaccggcgc ggccagccag tgcaggatga tcggccgatc
      541 gctgtcgatt tcggcctgcg ccgcgaccag acctgtatcc gcgtccagcg caaagctggc
      601 gcgatagccg atgccggtgg ccgcgcaacg ataggacagc gccagccgcc cttcggccgt
      661 ctcgtcgccc tgaaggcgga aggcggggcg cagcgggcgg ccctgcagat cgcgcgcgat
      721 cagccccggc tcgcccggga agctttgcga ggcttccggg cagatcgaca attcgggcag
      781 ccgatccagc atcccgccgg tgacatcggc caaccccgag cgggccagcg ccgccagatc
      841 ctcgtccggc ggcaggggcg cgccccaata gacgatctcg ggcaggcggg cgtcgcggct
      901 ggccaggacc aggctttgcc gcgcatcgtc cagcgaccag gttcggatca ttacttcacc
      961 gcccccagcg tcagccccgc gatgaagtgt ttctgcatca gaaagaacat cgccaccggc
     1021 ggcaatgcgg ccaggatcga tccggccgaa accagttgcc aggccgccac ccattgcccg
     1081 ttcagcgatt gcagtccggc ggtgatcggc tgcgtgccgg ccccggtcgt cagcaccgtt
     1141 gccca
//
LOCUS       DTVW01000146            1343 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1202992, whole
            genome shotgun sequence.
ACCESSION   DTVW01000146 DTVW01000000
VERSION     DTVW01000146.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1343)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1343)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1343
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1202992"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            125..>1343
                     /locus_tag="EYO87_01940"
     CDS             125..>1343
                     /locus_tag="EYO87_01940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64763.1"
                     /translation="MTADAARQSMQALKPKPWAVNRAAALSVLGEIEAGDATHVVWLS
                     NGLDDEAAGDFASALAKLGPVTLLADPAGALPKLLLPPLSDRDGLTIRALKAPGSPAR
                     ILNIRLRGENGGVLAVKTLNFEAGKTEARLKLPMPVEIRNRVTHIEIVNAGHAGGLVL
                     VDERWRRRPVGLVTDTGRRVDQPLLDDVFYLERALDPFTEVRTGSVQKLLRRELALLV
                     LADPGRISATNRRLIQNWMGEGGLVLRFAGPRLTEVKGPILPVRLRQGDREFGGALSW
                     TKPASLAAFPANSPFAGLAVPKDVKINRQVLAQPSVDLPDKTWARLTDGTPIVTAERL
                     GKGWLVFFHTTSSPNWSNLPLSGLFVGMLQNLVRLSRGVGGGADDRLLAPLRTIDGFG
                     ALGPARSGARTIKA"
BASE COUNT          212 a          468 c          438 g          225 t
ORIGIN      
        1 aaactggtcg gcgcgccaga acgcggccgc caacctgatc gatcaggccg agggcgatgg
       61 ccgcgccgtc gccattgtca ccacggcgcc cggcgagggc aaatcccggg ccctcgaatc
      121 gctgatgacc gccgacgcgg cgcgccaatc catgcaggcc ctgaaaccca aaccctgggc
      181 ggtcaaccgc gccgccgccc tatcggtgct cggcgagatc gaggccggcg atgcaaccca
      241 tgtggtctgg ctgtcgaacg gcctcgatga cgaggcggcc ggcgatttcg ccagcgccct
      301 tgccaagctc ggcccggtta cgctgctggc cgatccggcc ggcgccttgc ccaaactttt
      361 gttgccgccg ctgtcggacc gggacggact gaccatccgc gccctcaaag cccccggatc
      421 accggcgcga attttaaaca tccgcctgcg cggcgaaaat ggcggcgtgc tcgcggtcaa
      481 gacccttaat ttcgaagccg gcaagaccga ggcgcggctc aaacttccca tgcccgtgga
      541 aatccgcaac cgggtcaccc atatcgagat cgtaaatgcc ggccacgccg gcggcttggt
      601 tctggtcgac gagcgctggc gccgccgccc ggtgggcttg gtgaccgata ccggccggcg
      661 cgtcgatcag ccgctgctgg acgatgtctt ttatctggag cgggcgctgg atccgttcac
      721 cgaggtgcgc accggcagcg tccaaaaatt gctgcgccgc gaactggcgc tcttggtgct
      781 ggccgatccg gggcgcatat cggcgaccaa ccggcgcctt attcaaaact ggatgggcga
      841 gggcgggctg gttttgcgct ttgccggccc gcgtctgacc gaggtcaagg gaccgatctt
      901 gccggtccgc ctccgccagg gcgaccgcga gtttggcggc gctctgtcgt ggaccaagcc
      961 ggccagcctg gcggcctttc cggccaacag cccgttcgcc ggtctggcgg ttcccaagga
     1021 cgtaaaaatc aatcgccagg tcttggccca gccgagcgtc gatctgcccg acaagacctg
     1081 ggcgcggctg accgacggca cgccgatcgt caccgccgag cggcttggca agggctggct
     1141 ggtgtttttc cacaccacat ccagccccaa ctggtcgaac ctgcccttgt ccggattgtt
     1201 tgtcggcatg ctgcaaaatc tggtgcgcct cagccgcggc gtcggcggcg gcgccgatga
     1261 ccggttgttg gccccgctgc gcaccatcga cggtttcggc gccttgggcc cggcgcgttc
     1321 cggggcgcgc accatcaagg cca
//
LOCUS       DTVW01000147            1666 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1207985, whole
            genome shotgun sequence.
ACCESSION   DTVW01000147 DTVW01000000
VERSION     DTVW01000147.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1666)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1666)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1666
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1207985"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..505
                     /locus_tag="EYO87_01945"
     CDS             <1..505
                     /locus_tag="EYO87_01945"
                     /inference="COORDINATES: protein motif:HMM:PF10112.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64764.1"
                     /translation="EGEDFQQTRAERMIEEGEAYLAQIDQAMLRLGDRGLQSRVARFA
                     GTVRDLFDRVRSNPGDLSAARRYLGVYLMGARDATEKFAALYARSRDPATRTAYEAFL
                     DDLERDFSAKARKLLEGDRADLEIEISVLRDRLAREGVASPDRPNLTDSAQFLDDLLR
                     DPADRTR"
     gene            512..1294
                     /gene="truA"
                     /locus_tag="EYO87_01950"
     CDS             512..1294
                     /gene="truA"
                     /locus_tag="EYO87_01950"
                     /EC_number="5.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011907558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(38-40) synthase TruA"
                     /protein_id="HIC64765.1"
                     /translation="MPRFALLIEYDGGPFAGWQAQADQPSVQGAVEAALAKLDAGFAT
                     GARIAAAGRTDAGVHATGQVAHAELLRDWDAFRLAEALNFHLKPAPVAVLAAKRVAED
                     FHARFSATERRYLFRLIARRAPMTHDQGLAWRVLKPLDTRAMREAAAHLIGQHDFTTF
                     RSSICQAKSPLKTLDAIGIDEIAIPHGREYRFTLRARSFLHNQVRSIVGTLERVGAGS
                     WQPERVARALAARDRAACGPVCPPHGLYLTGVGYPGDPLFGI"
     gene            complement(1291..>1666)
                     /locus_tag="EYO87_01955"
     CDS             complement(1291..>1666)
                     /locus_tag="EYO87_01955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011746878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="sugar transferase"
                     /protein_id="HIC64766.1"
                     /translation="RIDELPQLFNILRGDMSFVGPRPPLREYVERFPAVYAQVLKSRP
                     GVTGLATLIYHRHEDRILARCKSAAATEAAYYRRCLPVKLKIDLIYQRHRDFGLDLWI
                     LWSTVKIVLTRKDERPRRRGRA"
BASE COUNT          264 a          557 c          567 g          278 t
ORIGIN      
        1 cgagggcgag gatttccagc agacccgcgc cgagcggatg atcgaggaag gcgaagccta
       61 tctggcgcag atcgaccagg ccatgctgcg ccttggtgat cgcggacttc aatcgcgcgt
      121 ggcgcgcttt gcggggacgg tgcgcgatct gttcgaccgg gtgcgcagca atcccggcga
      181 tctgtcggca gcgcggcgct atctgggcgt ctatctgatg ggcgcgcgcg acgcgaccga
      241 gaaattcgcg gctctctatg cccgcagccg cgaccccgcc acgcgcaccg cctatgaggc
      301 gtttctcgac gatctggaac gcgatttcag cgccaaggcc cgcaagctgc tggagggcga
      361 ccgcgccgat ctggaaatcg agatctcggt tttgcgcgac cggctggccc gcgaaggcgt
      421 ggccagcccg gatcgcccga acctgaccga ctcggcgcag tttctggacg acctgctgcg
      481 cgatccggcc gacaggacgc gctgactgcc gatgccccgc tttgccctgc tgatcgaata
      541 tgacggaggc cccttcgccg gctggcaggc gcaggccgac cagccctcgg tccagggcgc
      601 cgtcgaagcc gcgctggcca agctggatgc cggctttgcc acgggcgcgc ggatcgcggc
      661 ggcaggccgc accgatgccg gcgttcatgc gaccggacag gtcgcccatg ccgaactgct
      721 gcgcgactgg gacgctttcc gtctggccga ggcgctgaat ttccacctca agcccgcccc
      781 cgtggcggtg ctggcggcaa agcgggtggc cgaggatttt catgcccggt tctcggccac
      841 ggaacggcgc tatctgttca gactgatcgc ccgccgggca ccgatgacgc atgaccaggg
      901 ccttgcctgg cgcgtcctga aaccgctgga cacgcgggcc atgcgcgagg ccgccgcgca
      961 tctgatcggc cagcacgatt tcaccacatt ccggtcctcg atctgtcagg ccaagagccc
     1021 actgaaaacg ctggacgcga tcggcatcga cgaaatcgcg atcccccatg gccgggaata
     1081 ccgtttcacc ctgcgggcgc ggtctttcct gcataaccag gtgcgctcca ttgtcggcac
     1141 gctggaacgg gtgggcgcgg gttcatggca gccggagcgc gtggcccggg cattggcggc
     1201 gcgcgaccgc gcggcctgcg ggcctgtctg tccgccccat ggattgtatc tgacgggcgt
     1261 cggctatccc ggcgatcccc tgttcgggat ctaggcgcga ccgcgccggc gcgggcgctc
     1321 gtccttcctg gtcagcacga tcttgaccgt ggaccacagg atccacagat ccaggccgaa
     1381 atcgcggtgg cgctggtaga tcaggtcgat cttcagcttg accggcaggc agcggcgata
     1441 ataggcggcc tcggtcgcgg cggcggattt gcagcgtgcg aggatccggt cctcgtgccg
     1501 atgatagata agcgtcgcca gcccggtcac gcccggacgg cttttcagca cctgcgcgta
     1561 aactgcgggg aaacgttcga catattcgcg cagcggcggg cgcgggccga cgaagctcat
     1621 gtcgccgcgc aggatgttga acaactgcgg caattcgtcg atccgc
//
LOCUS       DTVW01000148            4032 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1208859, whole
            genome shotgun sequence.
ACCESSION   DTVW01000148 DTVW01000000
VERSION     DTVW01000148.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 4032)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4032)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4032
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1208859"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1104
                     /locus_tag="EYO87_01960"
     CDS             <1..1104
                     /locus_tag="EYO87_01960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007010254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HIC64767.1"
                     /translation="DPDMKAALIDHIAGDGIAHGLDLHTDTKARFLDALDRHILSPRG
                     MDHRVMFTGPTGANAVEAAMKIARKKTGRTNIIAFTNGFHGVTMGALAATGNSYHRGG
                     AAMDTQGVTRMPYDGFAKGIDGAALLDQMLSDASGGIDAPAAIMLETIQGEGGLNAAS
                     ADFVRDVAEVARKHGALLIIDDIQAGCGRSGTFFSFEKMDVTPDIVTMAKSISGFGLP
                     LALVLVRPEHDIFGPAEHNGTFRGNTHAFVTARVAIEKFWSDDAFQTELADKAALIER
                     RLTELADLVPGAFLKGRGLMRGVDVGTGDLAGKICGRAYEMGLVIETSGSDGQVVKVL
                     APLTTPADTFEKGFDILLQAAHDTLDTTRIAAE"
     gene            1110..1502
                     /locus_tag="EYO87_01965"
     CDS             1110..1502
                     /locus_tag="EYO87_01965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007118313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ectoine synthase"
                     /protein_id="HIC64768.1"
                     /translation="MIVRDFNKLKDTDRSVSDARWNSVRMLLADDGMGFSFHITTLEA
                     GSEHTFHYKHHFESVYCMSGRGSITDLGTGETHEIRPGVMYALNLHDRHTLRAEEELV
                     MACCFNPPVTGTEVHREDGSYAPVEETA"
     gene            1506..2945
                     /locus_tag="EYO87_01970"
     CDS             1506..2945
                     /locus_tag="EYO87_01970"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011537901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HIC64769.1"
                     /translation="MNSTPNHHTVEKIGGTTMSRVNELRDTLLIGSRSGADLYNRIFV
                     VSAFGGITDLLLEHKKSGESGVYASFAQSDSGYGWHDALDRVETRMIAAHNKVLDHPA
                     DIESADTFVRERILGARNCLIDLQRLCSYGHFRLSQHMLQIRELLSGLGESHSAYATT
                     LMLRRAGVNARFVDLSGWRDEGEVSLDERIQGAMNGVDPASEMPVVTGYAQCAEGLMH
                     EFDRGYSEVTFSRLAALTGAREAIIHKEFHLSSADPNLVGPDAVRKLGRTNYDVADQL
                     SNLGMEAIHPKAAKTLRQSGVPLRVTNAFEPEDPGTLIDDQPAEEAAVEIVTGLDLFA
                     FELFEQDMVGVKGYDAAIIDTLTRHSVRIVSKVSNANTITHYVDSSLKVLRRVEKDLA
                     EKYPSAEISSRAISMVAAVGRDMDGLSVLSRGLNALAEHGLEAIGATQGPRQVDVQFI
                     VERDQMKSVIRSLHGALVQGVRETSRRAA"
     gene            3279..3633
                     /gene="ssrA"
                     /locus_tag="EYO87_01975"
     tmRNA           3279..3633
                     /gene="ssrA"
                     /locus_tag="EYO87_01975"
                     /product="transfer-messenger RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF01849"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="alphaproteobacterial-type; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="RFAM:RF01849"
     gene            3895..>4032
                     /locus_tag="EYO87_01980"
     CDS             3895..>4032
                     /locus_tag="EYO87_01980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64770.1"
                     /translation="MARSGIDYGGMMHRAMQGLIADVLEGVAENGLPGEHHFFITFDT
                     RD"
BASE COUNT          785 a         1265 c         1257 g          725 t
ORIGIN      
        1 gatcccgaca tgaaggccgc gctgatcgac cacatcgccg gcgacgggat tgcacacggt
       61 ctggacctgc ataccgacac caaggcgcgc tttctcgacg cgctggatcg ccacatcctg
      121 tcgccgcgcg gcatggatca ccgggtgatg ttcacgggcc cgaccggcgc caacgccgtc
      181 gaggcagcga tgaaaatcgc ccgcaagaag accgggcgca ccaacatcat tgccttcacc
      241 aacggctttc acggcgtgac catgggcgcg ctggccgcga cgggcaacag ttatcaccgc
      301 ggcggcgccg cgatggacac acagggcgtg acacggatgc cctatgacgg gtttgccaag
      361 ggcatcgacg gagccgcttt gctggatcag atgctgtccg acgcctcggg cggaatcgac
      421 gcgccggccg cgatcatgct ggaaacgatc cagggcgaag gtggcctgaa cgccgcatcg
      481 gccgacttcg ttcgcgacgt ggcggaggtc gccagaaaac acggcgcatt gttgatcatc
      541 gacgacatcc aggcaggctg tggccgttcg gggacgttct tttcgttcga aaagatggat
      601 gtcacgccgg atatcgtcac catggccaag tcgatttcgg gcttcggcct gccgctggcg
      661 ctggttctgg ttcgtcccga acatgacatc ttcggccccg ccgaacataa cggcaccttc
      721 cggggcaaca cccatgcttt cgtgacggcc cgcgtcgcga tcgagaaatt ctggtcggat
      781 gatgccttcc agacggaact ggccgacaag gccgcactga tcgaacgccg tctgaccgaa
      841 ctggcggacc tggttcccgg cgccttcctg aagggtcgcg ggctgatgcg cggtgtcgat
      901 gtcggaacgg gtgatctggc cggaaagatc tgtggccgcg cctatgagat gggccttgtg
      961 atcgagacct cgggcagcga cggacaggtc gtcaaggtgc tggcccctct gaccacgccc
     1021 gccgacacat tcgaaaaggg tttcgacatc ctgctgcagg cagcgcacga caccctcgac
     1081 accaccagga tcgctgcgga gtagaagaca tgattgttcg cgatttcaac aagctgaaag
     1141 acaccgaccg ttcggtcagc gacgcgcgct ggaattcggt gaggatgctt ctggccgatg
     1201 acggaatggg cttttccttc cacatcacca ctctggaggc agggtcggaa cacaccttcc
     1261 actacaagca ccatttcgaa agcgtctatt gcatgtccgg tcgcgggtcg atcaccgacc
     1321 tgggcacggg cgagacgcac gagatcaggc ccggcgtcat gtatgcgctg aacctgcatg
     1381 accggcacac ccttcgggcc gaggaagaac tggtcatggc ctgctgcttc aatccgcccg
     1441 tcaccggaac cgaagtccat cgcgaggatg gatcctacgc cccggtggaa gaaacggcct
     1501 gagccatgaa cagcaccccg aaccatcata cggtcgaaaa gatcggcggc acgaccatgt
     1561 cgcgggtgaa cgaattgcgc gacacgctgc tgatcggcag tcgctcgggc gccgatctct
     1621 ataaccgcat cttcgtcgtc tccgcctttg gcggcattac cgacctgctg ctggaacaca
     1681 agaaatcggg cgaatccggc gtctacgcct cgttcgcgca atccgacagc ggctatggct
     1741 ggcacgacgc gctggaccgg gtcgaaaccc ggatgatcgc ggcccacaac aaggtgctgg
     1801 atcaccccgc cgatatcgaa agcgccgaca ctttcgtgcg cgaacggatc ctgggcgccc
     1861 gcaactgcct gatcgacctg caacgcctgt gttcctatgg ccatttccgc ctgtcccagc
     1921 acatgctgca gatccgtgaa ctgctgtccg gcctgggcga atcgcattcg gcctacgcca
     1981 ccacgctgat gctgcgacgc gctggcgtga acgcccgctt cgtcgatctg tcgggctggc
     2041 gtgacgaagg cgaggtttcg ctggacgaac gcatccaggg tgcgatgaac ggtgtcgatc
     2101 cggcatccga gatgcccgtc gtcaccggct atgcgcaatg cgccgaaggg ctgatgcacg
     2161 aattcgaccg cggctattcg gaagtgacct tctcgcggct ggcggcgctg accggcgcgc
     2221 gcgaggcgat catccacaag gaattccacc tgtcctcggc cgatccgaat ctggtcggac
     2281 ccgatgccgt gcgcaagctg ggccggacca attacgatgt cgccgaccag ctttccaacc
     2341 tcgggatgga ggcgatccat ccgaaggccg ccaagaccct gcgtcaatcc ggcgtgccgc
     2401 tgcgcgtgac caatgcattc gagcccgagg atcccggaac gctgatcgac gaccagcctg
     2461 ccgaggaagc ggcggtcgaa atcgtcaccg ggctggatct tttcgccttc gaattgttcg
     2521 aacaggacat ggtcggggtc aagggctatg acgcggcgat catcgacacg ctgacgcgcc
     2581 acagcgtgcg catcgtgtcc aaggtgtcga acgccaacac gatcacgcat tacgtggaca
     2641 gcagcctcaa ggtgctgcgc cgggtcgaga aggatctggc cgagaaatat ccttcggccg
     2701 aaatctcctc gcgcgcgatc tcgatggtcg cagcggtcgg gcgcgacatg gatggccttt
     2761 cggtgctcag ccgtgggctg aacgctctgg ccgagcacgg gctggaggcg atcggcgcca
     2821 cgcaggggcc gcgtcaggtg gatgtgcagt tcatcgtcga acgcgatcag atgaagtccg
     2881 tcatcaggtc gctgcacggc gcccttgtcc agggcgtccg cgaaaccagt cgacgcgcgg
     2941 cctgagtacc gatagcgaag atgaccagca aaaggccccg gcgaaggggg ccttttcgct
     3001 gtctgcgaag gactggcggc gcgatccgcc tggccgccgg tttcggcgat cctgatgact
     3061 atcaggccgg cccgcgacgg ccgcccgtcc cgtctgccga gccggcgccg atcggatcgc
     3121 cgcgcgcgcg cttgcccgga ggcgacaatg cggcgatgac atctgcgagc ggcaagatca
     3181 tccgggacag gttcgaaacc tgccagattt cgtcatccac gcttggccgg atcgggcccg
     3241 ccgcgatcgg aaggtttcgc ctgaatccca ccatggttgc ggttgcgaag acggggccgc
     3301 ctgcctatat tcatgatgtc cggtgcaagc cggactatgg acataaacgc gctcgtaata
     3361 cgcggatcgg acccgggggc ggtacccggc ggctccacca aaaaccctcg ttgggggaac
     3421 atggggccga aacaggatcg acgaacgtct aaaggggtta tgctttgtcc cggtgagcca
     3481 ccaccgttat cggtgcaaaa tgtacagttg ccaacgacaa ccgtgctccg gtcgctctgg
     3541 ctgcgtaagc agttcgagag atcgaaacct aagcccttcc gcctagcagc gtaaggcggg
     3601 gcccgcagga gcctggcaac agaatcctgc accttcaccc tttcatcagc ctgtccgcgc
     3661 ggaactgccg cgtaatccat cacgtttgcc aagacatccg gaaaaggaga ttttccatga
     3721 aggggcttgt ctcgtggtgg ctgggcgtgc cggtcgtgat catcgtgatc ctgtatctgt
     3781 tcggcgtgtt ctgatcgcat ccgtgggggc gacggccttt cacgaaagtc gcgcccccct
     3841 cttttcatcg acgtccatat gcctatgctg acgcgcaagc aaaaggatga cggcatggca
     3901 cgatccggga tcgattatgg cggcatgatg catcgggcga tgcaaggtct gattgccgac
     3961 gtccttgaag gcgttgcgga aaatggtctg ccgggcgagc atcacttctt catcaccttc
     4021 gacacccgcg ac
//
LOCUS       DTVW01000149            2030 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1210473, whole
            genome shotgun sequence.
ACCESSION   DTVW01000149 DTVW01000000
VERSION     DTVW01000149.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2030)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2030)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2030
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1210473"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..129)
                     /locus_tag="EYO87_01985"
     CDS             complement(<1..129)
                     /locus_tag="EYO87_01985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009826832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HIC64771.1"
                     /translation="MVLGLGAFLAPFMTLAANRIVAGEGVPIWQSAGPGVTLPGLAA"
     gene            complement(192..1100)
                     /locus_tag="EYO87_01990"
     CDS             complement(192..1100)
                     /locus_tag="EYO87_01990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014285559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HIC64772.1"
                     /translation="MKTNLVLAAVGLAGALASPALANITVSSKIDTEGGLLGNIIALA
                     LEDAGLPVERRLQLGGTQVVREALLAGQIDIYPEYTGNAAFFFNEADSDVWKNPEAAH
                     ARAAELDAAENQVIWLDAAPANNTWAIAVTGPVAEKNGLATMTDFGAWVAGGGDVKLA
                     ASTEFVSSPAVLPAMQKTYGFELSPDQTVILSGGDTAATIQAAARGTSGVNAAMVYGT
                     DGGVGATGLVVMEDDKGVQPVYQPTPIVREEVLGEYPAIADVLNPIFSGLDLKTLQDL
                     NGRIQVGGEPAEAVARDYLTRTGVLD"
     gene            1472..>2030
                     /locus_tag="EYO87_01995"
     CDS             1472..>2030
                     /locus_tag="EYO87_01995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008556968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HIC64773.1"
                     /translation="MTDTSPGFDTLAVHAGAEPDPATGARQVPIYQTTSYVFKNADHA
                     ARLFNLEEQGYIYSRLTNPTVAALVARVAALEGAVGGVGCSSGHAAQIMALFPLMGPG
                     CNIVASSRLYGGTITQFGQSIRRFGWTASFVDTDDLDAIKAAIDDKTRALFCETIANP
                     GGYVTDLDAMARIAEEAGIPLIVDNT"
BASE COUNT          337 a          714 c          639 g          340 t
ORIGIN      
        1 cgcggccagg cccggcagcg tcacgcccgg cccggccgat tgccagatcg gaaccccctc
       61 gccggccacg atacggttgg ccgccagtgt catgaaaggc gccaggaacg cgcccagtcc
      121 aagcaccatg aacagaagcc ccggcgccga cagcgccggc cagccgacgc gcgtctgtgt
      181 cgcggcgcgg atcagtccag cactccggtc cgggtcaggt aatcgcgcgc cacggcctcg
      241 gcaggctctc cgccgacctg gatgcggccg ttcagatcct gcagcgtctt cagatcaagg
      301 ccgctgaaga tcgggttcag gacatccgcg atggccgggt attcgcccag cacctcttcg
      361 cggacgatgg gcgtgggctg atagacgggc tgcacgccct tgtcgtcctc catcaccaca
      421 agcccggtcg ccccgacgcc gccatcggtg ccatagacca tcgccgcgtt cacgcccgac
      481 gtgccccgtg ccgcggcctg aatcgtcgca gccgtatcgc cgcccgacag gatcaccgtc
      541 tgatcgggcg acaattcgaa accataggtc ttctgcatcg cgggcagcac cgcgggcgat
      601 gacacgaact cggtcgaggc ggccagcttg acgtcaccgc cgccggcgac ccaggcgccg
      661 aaatcggtca tcgtggccag gccgttcttc tcggccaccg ggcccgtcac cgcgatggcc
      721 caggtgttgt tggcgggcgc cgcgtccagc cagatcacct ggttttcagc cgcgtccagt
      781 tcggccgcgc gggcatgggc ggcctcgggg tttttccaga catcgctgtc ggcctcgttg
      841 aagaagaagg cggcgttgcc ggtatattcg ggatagatgt cgatctgacc cgccagcaaa
      901 gcctcgcgca cgacctgcgt gccgcccagt tgcagccgcc gttcgaccgg cagtcccgca
      961 tcctccagcg ccagcgcgat gatattgcca agaagcccgc cctcggtgtc gatcttcgac
     1021 gagacggtga tattggccaa ggcggggctg gccagcgcgc ccgccagtcc gacagccgca
     1081 agaacgagat tggttttcat ggtgaggtag gctccctaaa attgcctgcg cttgggttgg
     1141 ccgaaaccgt ggacgtgaaa ccgtgacggt ttcaaggccg ctgcggggtc ggcgggtctg
     1201 ctcctgcggg gccctcggcc ggcatgaccg gccgaggacg acgaatcgtg tcgtattgaa
     1261 cgcccggaca ggggcccggt tcccttgccg tgcagggctg gcgccagcga cgacgccaat
     1321 tcccgcggcc ggccgccaaa ccgtttgcct cccccggttg cttttgcttt aatcaaggga
     1381 aatcaggccc cgccgctgcc attctccggc acaaggttcc ggaaatgcca gcgcgccctg
     1441 ccccgttccg cgaccgacag gaaacccctt catgaccgat acatcccctg gctttgacac
     1501 attggccgtt cacgcggggg ccgaaccgga tccggccacg ggtgcaaggc aggttcccat
     1561 ctatcagacc acctcctacg tgttcaaaaa cgccgatcac gcggcgcgcc tgttcaatct
     1621 cgaggaacag ggctacatct attcgcgcct gaccaacccg accgtggccg ccctggtcgc
     1681 gcgcgtggcc gcgctggagg gcgcggtcgg cggcgtcggc tgttcgtcgg gacatgccgc
     1741 ccagatcatg gcgctgtttc cgctgatggg gccgggctgc aatatcgtgg cctcctcgcg
     1801 gctctatggt ggcaccatca cccagttcgg ccagtccatc cgccggttcg ggtggaccgc
     1861 cagcttcgtc gataccgacg atctggacgc gatcaaggcc gccatcgacg acaagacccg
     1921 cgcgctgttc tgcgaaacca tcgccaatcc cggcggctat gtcaccgatc tggacgcgat
     1981 ggcccggatc gccgaggagg cgggcattcc gctgatcgtc gacaacacca
//
LOCUS       DTVW01000150            1250 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1210793, whole
            genome shotgun sequence.
ACCESSION   DTVW01000150 DTVW01000000
VERSION     DTVW01000150.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1250)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1250)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1250
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1210793"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..490
                     /locus_tag="EYO87_02000"
     CDS             <1..490
                     /locus_tag="EYO87_02000"
                     /inference="COORDINATES: protein motif:HMM:PF02567.14"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PhzF family phenazine biosynthesis protein"
                     /protein_id="HIC64774.1"
                     /translation="PGLIARALDLPADAIGPDGHQPGIWQGGPAFLFVPIRDPASLAA
                     ARPVEPCWSQAVVPGIVGAYLYTPDRGGYRARMFAPTAGIPEDPATGSASAILAGPLL
                     ASGVLSRGENRIALRQGIEMGRPSRIGLTAIVRDGALTEIRISGRAAKVAEGRITIPE
                     VE"
     gene            487..774
                     /locus_tag="EYO87_02005"
     CDS             487..774
                     /locus_tag="EYO87_02005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013639970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1330 domain-containing protein"
                     /protein_id="HIC64775.1"
                     /translation="MKGYWIAHVSVDDAQAYEAYRQANAAAFAKYGARFLVRGGPQDV
                     VEGAARPRSVVLEFPSIEAARACYHSPEYRRAKALRDPVSQVDLVIVEGWD"
     gene            814..>1250
                     /locus_tag="EYO87_02010"
     CDS             814..>1250
                     /locus_tag="EYO87_02010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013960947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerB family tellurite resistance protein"
                     /protein_id="HIC64776.1"
                     /translation="MFRNLLSRLFADDTDDAPLQAQDAEVAIAALLVRVARADDRYET
                     SERQRIDQILARRRGLNMAEAAERRAVAEMIEAEAPDTVRFTRLIKDRIPLEDRAGVL
                     SAMWEVAYADSRRAADEETLIRLVAGLLGIPDRDSGLLRQRVL"
BASE COUNT          185 a          413 c          446 g          206 t
ORIGIN      
        1 acccggcctg atcgcgcggg cgcttgatct gccggcggat gcgatcgggc cagacggcca
       61 tcagccgggc atctggcagg gcggtccggc attcctgttc gttcccattc gcgatccggc
      121 ctctctggcc gccgcccgcc cggtcgaacc ctgctggtcg caggcggtgg tgccggggat
      181 cgtgggcgcc tatctctata ccccggatcg gggcggctat cgcgcccgga tgttcgcgcc
      241 cacggccggc atacccgaag acccggccac cggttcggcc tcggccatcc ttgccgggcc
      301 gctgctggca tcgggcgtgc tgagcagggg cgagaaccgg atcgcgcttc gacagggaat
      361 cgagatgggg cgaccctcgc ggatcggcct gaccgccatc gtgcgggacg gcgccctgac
      421 cgaaattcgg atttctggcc gggcggcgaa ggtcgcggaa ggccgcatca ccataccgga
      481 ggtcgaatga agggttattg gatcgcgcat gtctcggtcg atgatgcgca ggcttacgag
      541 gcctacaggc aggccaatgc cgccgccttc gcgaaatacg gggcgcggtt tctggtccgg
      601 ggcgggccgc aggacgtggt cgagggtgcc gcccggccgc gcagcgtggt gctggaattt
      661 ccctcgatcg aggcggctcg ggcctgctat cacagcccgg aataccggag ggccaaggcg
      721 ctgcgcgatc cggtctccca ggtcgatctg gtgatcgtcg agggctggga ctgagtgctt
      781 gcagccgccg acaaatccca taagatcacg tgcatgttcc gcaatctcct gtcccgcctc
      841 tttgccgacg ataccgacga cgcacccttg caggcgcagg atgcggaggt cgcgatcgcg
      901 gcgcttctgg tccgggtcgc ccgggcggat gatcgctacg agaccagcga aaggcagcgg
      961 atcgaccaga tcctggcgcg ccgccgtggt ctgaacatgg ccgaggccgc cgaacgccgc
     1021 gccgttgcgg aaatgatcga ggccgaggcc cccgacacgg tgcgctttac ccggctgatc
     1081 aaggaccgga tcccgctgga ggaccgcgcc ggcgtcctgt cggccatgtg ggaggtcgcc
     1141 tatgccgatt cccgccgcgc cgccgacgaa gagacgctga tccggctggt ggcgggattg
     1201 ctgggtatcc ccgatcgcga ttcgggcctg ctgcgccagc gcgtgctgga
//
LOCUS       DTVW01000151            2678 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1211153, whole
            genome shotgun sequence.
ACCESSION   DTVW01000151 DTVW01000000
VERSION     DTVW01000151.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2678)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2678)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2678
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1211153"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..181)
                     /locus_tag="EYO87_02015"
     CDS             complement(<1..181)
                     /locus_tag="EYO87_02015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010395895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HIC64777.1"
                     /translation="MQTGFLGIIAFGLLLFMLVQARFILISLAIAIILFSLTTDAIMG
                     ISSRLKVPKWLGTTLA"
     gene            complement(259..>2678)
                     /gene="gyrA"
                     /locus_tag="EYO87_02020"
     CDS             complement(259..>2678)
                     /gene="gyrA"
                     /locus_tag="EYO87_02020"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005982878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA gyrase subunit A"
                     /protein_id="HIC64778.1"
                     /translation="SMSLPLLDGQGNFGSMDGDPPAAMRYTEVRMDKPANFLLADIDK
                     DTVDFQDNYDGKDHEPTVLPARFPNMLVNGAGGIAVGMATNIPPHNLGEVVDATLALI
                     EDPDLPTERIMEIIPGPDFPTGAMILGRSGARKAYLEGRGSVIIRAKTHIEEPRKDRF
                     AIVIDEIPYQVNKSSMIERIAELAKEKRIEGIASVQDESDRQGVRVVVELKRDATTDV
                     VLNQLFRFTQMQTSFGCNMLALNGGKPEQLPLRDFLTYFISFREEVVARRTAHELRKA
                     RERSHVLCGLAVAVSNVDEVVATIRSSVDAAEARQRLMERRWPAHDIVEYLRLIDDPL
                     HPVNEDGTYNLSETQARAILDLRLQRLTQIGVKEVTDELQSLAESIRDYLAILASRER
                     IMAIISDELREVKQLFAVPRRTEITEWSGDMMDEDLIEREDMVVTITSGGYIKRTALA
                     EFRSQRRGGKGLSGMATKEDDVVTTLFVANTHTELLFFTTDGMVYRLKTWRLPLGGRT
                     AKGKAIVNILPIEPGVSIAALMPVDAPETEWEAYQAVFATSQGDVRRNALSDFTNVKS
                     NGKIAMKLPEGVSLIGVRMATVEDDVMLVTAQGRAIRFPTTAVRVFKGRDSTGVRGIR
                     LADGDSVVSMSVIRHFEADPAERAAYLKMRRAVAGALDDGAEADEDEEAVAEGSITQE
                     RYARMSAAEDLILTITARGAGKISSSHGYPVRGRGGQGVMAMDRAMRGGPLVASFPVE
                     MDDQIMLATSTGQSIRVPVEGISFRSRSAGGVKVFNTANGEVVVSVARIAEQGDTEEG
                     DTDETEG"
BASE COUNT          460 a          895 c          818 g          505 t
ORIGIN      
        1 gcgccagcgt cgtgcccagc catttcggca ccttcagccg cgacgaaatg cccatgatcg
       61 catccgtcgt cagcgagaac aggatgatgg cgatggccag agagatcagg atgaagcgcg
      121 cctgaaccag catgaacagc agcaggccga aggcgatgat gcccagaaag cccgtctgca
      181 atcgatcccg caggatctgt tcgcgtgaat tgtggtccaa tccctgcctc gccctgtcgc
      241 ggaaagccgg gggctattct aaccctccgt ctcgtccgtg tcgccctctt ccgtgtcgcc
      301 ctgttccgcg attcgcgcga ccgaaaccac gacctcgcca ttggctgtat tgaacacctt
      361 cacgccgccg gcgctgcgcg aacggaagct gatcccctcg accggcacgc ggatcgactg
      421 cccggtcgag gtcgccagca tgatctggtc gtccatctcg accggaaagc tggcgaccag
      481 cgggccgccg cgcatggccc ggtccatcgc catcacgccc tggccaccgc gcccgcgcac
      541 cggatatcca tggctggagc tgatcttgcc cgcgcccctg gcggtgatcg tcaggatcag
      601 atcctcggcc gccgacattc gggcatagcg ttcctgggtg atgctgccct cggccacggc
      661 ttcttcgtcc tcgtcggcct cggctccgtc atccagcgcc ccggcgaccg cgcgacgcat
      721 cttcagatag gccgcgcgct cggccggatc ggcctcgaaa tggcggatca ccgacatgct
      781 gacgacgctg tcgccatctg ccagacggat gccgcgcacg ccggtcgaat cgcggccctt
      841 gaagacccgg actgcggtgg tcggaaagcg gatcgccctg ccctgcgccg tcaccagcat
      901 cacgtcatcc tcgaccgtgg ccatccgcac gccgatcagg ctgacgcctt cgggcagctt
      961 catggcgatc ttgccgttcg acttgacatt ggtgaagtcc gacagggcgt tgcggcgcac
     1021 atcgccctgc gaggtggcga aaacggcctg atatgcctcc cattcggtct cgggtgcatc
     1081 gacgggcatc agcgcggcga tggagacgcc cggctcgatc ggcaggatgt tgacgatcgc
     1141 cttgcccttc gcggtccgtc cgcccagcgg aaggcgccat gtcttcagtc ggtagaccat
     1201 gccgtccgtg gtgaagaaca gcagctcggt atgggtattg gcaacgaaca gcgtcgtcac
     1261 cacgtcatct tccttggtgg ccatgcccga caggcccttg ccgccgcgac gctggctgcg
     1321 gaattcggcc agcgccgtgc gcttgatata gccgcccgag gtgatggtga cgaccatgtc
     1381 ctcgcgctcg atcaggtcct cgtccatcat gtcgccggac cattcggtga tctcggtgcg
     1441 gcggggcacg gcgaagagct gtttcacctc gcgcaattcg tcgctgatga tggccatgat
     1501 ccgttcgcgc gaagcaagga tcgccagata gtcgcggatc gactcggcca gggattgcaa
     1561 ctcgtccgtg acctccttga cgccgatctg ggtcaggcgt tgcaggcgca aatccaggat
     1621 cgcgcgggcc tgggtttcgg acaggttata ggtgccgtcc tcgttcaccg gatgcagcgg
     1681 atcgtcgatc agacgcaggt attcgacaat gtcatgggcg ggccagcgcc gttccatcag
     1741 ccgctgacgc gcctcggccg catcgacgct gctgcggatc gtggccacga cctcatcgac
     1801 attgctgacg gcgaccgcca ggccgcacag gacatggctg cgttcacgcg ccttgcgcaa
     1861 ttcatgggcc gtgcgacgag ccacaacctc ttcgcggaaa cttatgaaat aagtaagaaa
     1921 atcccgcaga ggcagctgct ccggcttgcc cccgttcagc gccagcatgt tgcagccgaa
     1981 actggtctgc atctgggtga accggaacag ctgattcagc accacatcgg tcgtcgcgtc
     2041 acgtttcagc tcgaccacga cgcggacacc ctgccggtcg gattcgtcct gcacgctggc
     2101 gatgccctcg atccgctttt ccttggccag ttccgcgatc cgctcgatca tgctggactt
     2161 gttgacctga taggggatct cgtcgatgac gatggcgaaa cggtccttgc gcggctcctc
     2221 gatatgggtc ttggcgcgga tgatgacgct gccgcgcccc tccagatagg ccttgcgcgc
     2281 acccgaccgg cccaggatca tcgcgccggt cgggaagtcg gggccgggaa tgatttccat
     2341 gatccgctcg gtcggcagat cgggatcctc gatcagggcc agtgtggcgt ccaccacctc
     2401 gcccagatta tgcggcggga tattggtcgc catgccgacc gcgatgccgc ctgcaccgtt
     2461 gaccagcatg ttcggaaacc gcgccggcaa caccgtcggc tcgtgatcct tgccatcgta
     2521 attgtcctgg aaatcgacgg tatccttgtc gatatcggcc agcaggaaat tcgccggctt
     2581 gtccatgcgc acttcggtat agcgcatggc ggcgggcgga tcgccgtcca tcgagccaaa
     2641 gttgccctgc ccgtccagaa gcggcagcga catcgaga
//
LOCUS       DTVW01000152            6293 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1211515, whole
            genome shotgun sequence.
ACCESSION   DTVW01000152 DTVW01000000
VERSION     DTVW01000152.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 6293)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6293)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6293
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1211515"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1359)
                     /locus_tag="EYO87_02025"
     CDS             complement(<1..1359)
                     /locus_tag="EYO87_02025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013652023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HIC64779.1"
                     /translation="MRARPITRRGIVVGFLIAGLVCLPFADLTLAGNDPWAALSRMGM
                     GFLSPDFGAVERIMRAIALTLAFAIAGVAAGAVAGLMMAPFYRLRPVRWLAIALRSVH
                     ELFWALILMQITGIGVTTGILAIALPYAGIFAKVLSEILDESDRRPSDWLGARVDPLS
                     RFLWARMPLARREMATYTLYRLECGLRSSAVLGFVGLPTLGFQLDSFFRQGNYAAAGA
                     IMAVYIALIATIRLWMRPHAVWAWLIAAGIVLVRVDAPPMGQGALWRFLTSDIVPAPL
                     RQGDPAGLGPWLWDLVAGSILPGLAATLVVAQLALILAGLVAFCGQALIVPRVTGRLV
                     AIPGHLFLVVLRSFPEYMLAYLFLQVFGPSMLPAILALGLHNGAIIAHLLGRQAGGLA
                     LRADAPRGLTLWGWEIVPRLFGQFVALCLYRWEIIIRESAIVGILGVATLGFYLDDAI
                     SQL"
     gene            complement(1349..2008)
                     /locus_tag="EYO87_02030"
     CDS             complement(1349..2008)
                     /locus_tag="EYO87_02030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009503690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HIC64780.1"
                     /translation="MQLLIAADLGYGAAPVLRDVTLDVESGQRVALLGRSGAGKSTLL
                     AAIRQALLDRGLRVALVPQDHALVPQLSALHNVLMGRLDDHGALYNLATLIRPRRTDR
                     AAALKVLARVGLTPEAERPVEALSGGQKQRVALARALYRGGDVLVADEPLSAVDPVQA
                     QALAGLIGTTFPTSILALHDVSVALTFATRLIGLDGGRIALDMPAQDAKTAAIEALYA
                     R"
     gene            complement(2012..2878)
                     /locus_tag="EYO87_02035"
     CDS             complement(2012..2878)
                     /locus_tag="EYO87_02035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008251840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative selenate ABC transporter
                     substrate-binding protein"
                     /protein_id="HIC64781.1"
                     /translation="MRLFLRPILFALALTLGIGAAHAQQTLYFSAIPDEDETRLTERF
                     GKVAAYLSDRLGVPVKFVPVKSYPAAVTAFRNDQVQLAWFGGLSGVQARLLVPGARAI
                     AQGAEDRRFVTYFIANTETGLTRSDDFPLAARGMTFTFGAKTSTSGRLMPEYYIREKT
                     GQAPDDFFSRVGFSGDHSQTLRLVASGAWQIGALNFAVYDQAVAENAPEIETAKVIWK
                     TPPYPDYNWTIRGDVDARWGEGFTDKVQAALLGMADAELLAAFPRSAFIAAGNDDYVP
                     IETIGRELDLLE"
     gene            3162..3761
                     /locus_tag="EYO87_02040"
     CDS             3162..3761
                     /locus_tag="EYO87_02040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018634266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocation signal
                     domain-containing protein"
                     /protein_id="HIC64782.1"
                     /translation="MNIELSRRGFLRLAGAGVAATSLGAMGFGEAEAAEAAHVRAFKL
                     TTTTETRNTCTYCSVACGIIMYSKGDVKAGEKADLLHIEGDADHPTNRGTLCPKGAAL
                     RDFVQAETRLTRPRYRAAGATEFQDISWDDALNKIARALKDDRDANLVQVNEAGVPVN
                     RWTTTGFLAASATTNETAWLTYKAVRSMGIVGFDNQARV"
     gene            3810..6245
                     /gene="fdnG"
                     /locus_tag="EYO87_02045"
     CDS             3810..6245
                     /gene="fdnG"
                     /locus_tag="EYO87_02045"
                     /inference="COORDINATES: protein motif:HMM:TIGR01553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase-N subunit alpha"
                     /protein_id="HIC64783.1"
                     /translation="MTNAWTDIKNTDLVIVMGGNAAEAHPCGFKWVTEAKDNRGAKLI
                     VVDPRYTRTASVSDFYAPIRPGSDIAFLMGVIRWCIANDKVQWEYVTNFTNAALLVKD
                     EFGWSDGLFTGYDEEKRDYDKESWDYKKDADGYAQVDMTLKDPRCVWNLLKAHVDVYT
                     PEFVENVCGTPKDRFLTICEMIGECSARDKVMTSMYALGWTQHSKGAQNIRGMAMLQL
                     ILGNIGMRGGGMNALRGHSNIQGLTDLGLMSNLIPGYLNIPTEKEPDWQTYMSSRNFT
                     PLRPGQTSYWQNYSKFMVSFMKAMWGDAATQDTDWAYHYLPKLDVPTYDVLRMFELMK
                     QGRINNYFCQGFNPLMAFPDRTKLTEALSNLKLLVVMDPLETETAHFWQNHGVHNEVD
                     SASIQTEVLELPTTCFAEDEGALVNSGRWLQWHWPGATPPGEARNDTWIMANIFQRVR
                     KLYEDEGGIFPEPILNLTWNYQDPLSPSPEELAREMNGRALRDVPDPANPGATLVAAG
                     KQLKNFSQLQDDGSTMCGCWIFSGCWNEDGNNMARRDNSDPGDTGLFLNWSFSWPLNR
                     RILYNRASADLQGKPWDPDRKLIEWTGEKWEGYDVPDIGLTSKPGEVMPFIMNPEGTG
                     RLFTRGMMRDGPFPSHMEPFESPLANVLNPKMRGNPVSRIFVNDAEALGTSDEFPFVA
                     TSYRLTEHFHYWTKHNKVNASLQPEFFVEISEELAAEKGIAKGGRVRVWGKRGQVWAK
                     AVVTRRIKPMQCDGKTIHVVGIPLHWGFMGVAKKGWGPNSLTPFVGDANVETPEFKAF
                     LVNIEPAAEEPVA"
BASE COUNT         1286 a         2046 c         2015 g          946 t
ORIGIN      
        1 caattgcgaa atcgcgtcat ccagataaaa gcccagcgtg gcgacgccca gaatcccgac
       61 gattgcactt tcccggatga tgatctccca ccggtagaga cagagcgcga caaattgccc
      121 gaaaagtcgc ggcacgatct cccagcccca cagggtcaga ccgcgcggcg catcggcgcg
      181 cagggccagc ccgccggcct gccggcccag cagatgggcg atgatcgcgc cattatgcag
      241 gccaagcgcc aggatcgcgg gcagcatcga agggccgaag acctgcagaa agagataggc
      301 cagcatgtat tcgggaaagc tgcgcaggac gaccagaaac agatggcccg gaatggcgac
      361 gagccggccg gtgacgcgcg gcacgatcag cgcctgcccg caaaaggcaa cgagcccggc
      421 aaggatcagg gccagttgcg ccaccaccag cgttgcggcg aggcccggca ggatcgaccc
      481 cgcgaccaga tcccacaacc acggtcccag ccccgccgga tcgccctgcc gcagcggcgc
      541 gggcacgatg tcgctggtca ggaaccgcca cagcgcgccc tgccccatcg gtggcgcatc
      601 gacacggacc agcacgattc cggccgcgat cagccatgcc cagaccgcat gcgggcgcat
      661 ccacagacgg attgtcgcga tcagcgcgat atagaccgcc atgatcgcgc ccgccgctgc
      721 ataattgccc tgacgaaaga agctgtccag ttgaaagccc agcgtcggca ggccgacaaa
      781 ccccagcacg gccgaggacc gcagaccgca ttccagccgg taaagggtgt aggttgccat
      841 ctcgcgccgc gccagcggca ttcgggccca caggaaccgg ctcagcggat cgacccgggc
      901 gccaagccag tccgagggcc gccggtcgga ttcgtcgagg atttcggaca gaaccttcgc
      961 gaagatcccg gcatagggca gcgcgatggc gaggatcccg gtggtgacgc cgatcccggt
     1021 gatctgcatc aggatcagtg cccagaacaa ttcgtggacc gaacgcaggg cgatggccag
     1081 ccagcgcacc ggacgaagac gatagaacgg cgccatcatc aggccggcca cggcccccgc
     1141 cgccacgccg gcgatggcga aggccagggt cagggcgatg gcgcgcatga tccgttcgac
     1201 ggcgccgaaa tccggcgaca gaaaccccat ccccatgcgc gacagcgcgg cccagggatc
     1261 gtttcccgcc agggtgagat cggcgaaggg caggcagaca agccccgcga tcagaaagcc
     1321 cacgacaatg ccgcggcgcg tgatcggcct agcgcgcata tagcgcctcg atcgcggcgg
     1381 tctttgcatc ctgggccggc atgtccagcg cgatccggcc gccatccagt ccgatcagcc
     1441 gcgtggcaaa ggtcagggcg accgacacat cgtgcagcgc aaggatcgag gtcggaaagg
     1501 tcgttccgat caggccggcc agcgcctggg cctgaaccgg atcgacggcg gaaagcggct
     1561 cgtccgcgac cagcacgtcg ccgccccgat acagcgcccg cgccagtgca acgcgctgtt
     1621 tctgaccgcc cgacagcgcc tcgaccgggc gctcggcctc gggcgtcagg ccgacgcggg
     1681 ccagaacctt cagcgccgcc gcgcgatcgg tccggcgcgg gcgaatcagc gtcgcaagat
     1741 tgtagagcgc gccgtgatcg tccagccgtc ccatcagcac gttgtgcagc gccgaaagct
     1801 gcggcaccag cgcatggtcc tgcggaacca gcgccacccg cagcccgcga tccagcaggg
     1861 cctgccggat cgccgccaga agcgtggact tgcccgcccc gcttcgtccc agcagcgcga
     1921 cccgctgacc ggattcgaca tccagcgtga cgtcgcgcag gacaggcgcg gcgccatagc
     1981 ccagatcggc ggcaatcagc agttgcaaga cctactccag cagatccagt tcgcggccta
     2041 ttgtctcgat cgggacgtaa tcgtcattgc cggcggcgat gaaggcactg cgcgggaagg
     2101 ccgcaagcag ctccgcatcg gccatgccca gcagcgcggc ctgcaccttg tcggtgaagc
     2161 cctcgcccca gcgggcatcg acatcaccac ggatcgtcca gttgtaatcg ggatagggag
     2221 gcgtcttcca gatcaccttc gccgtctcga tttccggcgc gttttcggcc acggcctgat
     2281 cgtagacggc aaaattcagc gcgccgatct gccatgcccc ggatgcgacc aaccgcagcg
     2341 tctggctgtg atcgccggaa aagccgacgc ggctgaaaaa atcgtcgggc gcctgcccgg
     2401 ttttctcgcg gatgtaatat tccggcatca gtcgacccga ggtcgaggtc ttggcgccga
     2461 aggtgaaggt catgcccctg gcggccaggg gaaagtcgtc ggatcgggtc aggccggttt
     2521 cggtattggc gatgaaatag gtgacgaatc gccggtcctc ggcgccttgc gcgatggcgc
     2581 gggcccccgg aaccagcagc cgggcctgaa ccccggacag cccgccgaac cacgccagtt
     2641 gcacctgatc gttgcgaaac gcggtgacgg cggcgggata ggacttcacc ggaacgaatt
     2701 tcaccgggac gcccagccga tcggacaggt aggccgcgac cttgccgaac cgctctgtca
     2761 ggcgggtttc gtcctcgtcc gggatggcgc tgaaatacag cgtctgctgt gcatgggcgg
     2821 cgccgatgcc aagggtcagg gcaagggcga acaggatcgg gcgaaggaaa aggcgcatcg
     2881 gaaacggctc cggcatcgaa ttcgggaggg ggctgatagc cggcgggccg ccgggatgcc
     2941 agaccccgtt tgccacgcgc cgtgtcgatg atccggcccg acgggcaagc cggaatcctg
     3001 tccggcccaa gcgcagcctg cgcatcggat gatcacctcc gacgctagca gatgttccgc
     3061 gaagagtgaa gatcggccga tccgtttcgc ttgacttggc gtgccgccat cagcagcatg
     3121 gaaatcgtac ctatcatact gacaggcaac aggagggtca catgaatatc gaactctcgc
     3181 gccgcggctt tctgaggctg gcgggtgctg gggttgcggc gacctcgctg ggggcaatgg
     3241 gcttcggcga agcagaggcg gccgaggcgg cgcatgtgcg cgccttcaag ctgaccacga
     3301 ccacggaaac gcgcaacacc tgcacctatt gttcggtcgc ctgcggcatc atcatgtatt
     3361 ccaagggcga cgtgaaggcc ggcgaaaagg ccgatcttct gcatatcgag ggcgatgccg
     3421 accatccgac caatcgcgga accctgtgcc ccaagggcgc ggcgctgagg gatttcgtgc
     3481 aggccgaaac ccggctgacc cgtccccgct atcgcgccgc gggtgcgacc gagttccagg
     3541 acatcagctg ggacgacgca ctgaacaaga tcgcgcgcgc gctgaaggac gaccgcgacg
     3601 ccaatctggt gcaggtcaac gaggcgggcg tgccggtcaa ccgctggacg accaccggct
     3661 tcctggccgc ctcggccacc acgaacgaga ccgcatggct gacctacaag gccgtccggt
     3721 cgatgggaat cgtcggcttc gacaaccagg cacgcgtctg acacggccct acggtagcca
     3781 gtttggctcc aacttttggc cgtggcgcga tgaccaacgc ctggaccgac atcaagaaca
     3841 ccgatctggt gatcgtgatg ggcggcaatg ccgccgaagc ccatccctgc gggttcaaat
     3901 gggtcaccga agccaaggac aatcgcggcg ccaagctgat cgtggtcgat ccgcgctata
     3961 cccgcacggc cagcgtgtcc gacttctacg ccccgatccg tccgggcagc gacatcgcct
     4021 tcctgatggg cgtgatccgc tggtgtatcg ccaatgacaa ggtgcagtgg gaatacgtca
     4081 cgaacttcac gaacgccgcc cttctggtaa aggacgagtt tggctggtcg gatggcctgt
     4141 tcaccggcta tgacgaggaa aagcgcgact acgacaagga aagctgggac tacaagaagg
     4201 acgccgacgg ctacgcgcag gtcgacatga ccctgaaaga cccgcgctgt gtctggaacc
     4261 ttctgaaggc ccatgtcgat gtctacacgc ccgaattcgt cgagaatgtc tgcggcacgc
     4321 cgaaggacag gttcctgacc atctgcgaga tgatcggcga atgcagcgcg cgcgacaagg
     4381 tgatgacctc gatgtatgcg cttggctgga cgcagcattc caagggtgcg cagaacatcc
     4441 gcgggatggc catgttgcag ctgatcctgg gcaatatcgg gatgcgcggg ggcgggatga
     4501 acgcgctgcg cggccattcc aacatccagg gcctgaccga tctgggcctg atgtcgaacc
     4561 tgatccccgg ctatctcaac atcccgacgg aaaaggaacc cgactggcag acctacatgt
     4621 ccagccggaa cttcacgccg ctgcgaccgg ggcagaccag ctactggcag aactattcga
     4681 aattcatggt cagcttcatg aaggccatgt ggggcgatgc cgcgacccag gacaccgact
     4741 gggcctatca ctacctgccc aagctggacg tgccgaccta tgacgtgctg cgcatgttcg
     4801 aactgatgaa gcaggggcgg atcaacaact acttctgcca gggcttcaac ccgctgatgg
     4861 cgttccccga ccgcaccaag ctgaccgagg cgctgtcgaa tctgaaactg ctggtcgtca
     4921 tggacccgct ggagacggaa accgcgcatt tctggcaaaa tcacggcgtc cataacgagg
     4981 tggacagcgc ctcgatccag accgaggttc tggaactgcc gaccacctgc tttgccgagg
     5041 acgaaggcgc gctggtcaat tcgggccgct ggctgcaatg gcactggccg ggggcgacgc
     5101 cgccgggcga ggccaggaac gacacctgga tcatggccaa catcttccag cgggtgcgca
     5161 agctctatga ggacgagggc gggatattcc cggaaccgat cctcaatctg acctggaact
     5221 atcaggatcc gctcagcccc tcgcccgagg aactggccag ggaaatgaac ggccgcgccc
     5281 tgcgcgacgt tcccgacccg gccaatcccg gcgccaccct ggtcgcggcg ggcaagcagc
     5341 tgaagaactt ttcgcaattg caggacgatg gctcgaccat gtgcggttgc tggatcttct
     5401 cgggctgctg gaacgaggac ggcaacaaca tggcgcggcg ggacaattcc gatccgggcg
     5461 ataccggcct gttcctgaac tggtccttct cctggccgct gaaccggcgc atcctgtata
     5521 accgggcctc ggccgatctt cagggcaagc cctgggatcc ggaccgcaag ctgatcgaat
     5581 ggaccggcga gaaatgggaa ggctacgacg ttcccgatat cggactgacc tcgaagcccg
     5641 gcgaagtcat gcccttcatc atgaatcccg agggaacggg gcggctgttc acgcggggaa
     5701 tgatgcggga cggtcccttc cccagccaca tggagccctt cgaaagcccg ctggccaacg
     5761 tgctgaaccc gaagatgcgc ggaaatccgg tcagccggat cttcgtgaac gatgccgagg
     5821 cactgggcac cagcgacgag tttccctttg tcgcgacctc gtatcgcctg accgagcatt
     5881 tccactactg gaccaagcac aacaaggtga acgcctcgct tcagccggaa ttcttcgtcg
     5941 agatcagcga ggaactggca gccgagaagg gcatcgccaa aggcggccgc gtccgtgtct
     6001 ggggcaagcg cggccaggtc tgggccaagg ccgtcgtgac caggcggatc aagccgatgc
     6061 agtgcgatgg caagaccatc catgtcgtcg ggattccgct tcactggggc ttcatgggcg
     6121 tggccaagaa gggctggggg ccgaacagcc tgacgccctt tgtcggcgac gccaacgtgg
     6181 aaacgcctga attcaaggcg ttccttgtca atatcgaacc cgcagcagag gagccggtgg
     6241 catgaccgag accgcacctc aaccaaccac ggcggcagca aacccaccgg ttc
//
LOCUS       DTVW01000153            1620 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1211578, whole
            genome shotgun sequence.
ACCESSION   DTVW01000153 DTVW01000000
VERSION     DTVW01000153.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1620)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1620)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1620
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1211578"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>1620
                     /gene="nusA"
                     /locus_tag="EYO87_02050"
     CDS             <1..>1620
                     /gene="nusA"
                     /locus_tag="EYO87_02050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019295267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusA"
                     /protein_id="HIC64784.1"
                     /translation="VAREKMIEPELVIEAMEDSLARAAKSRYGSEMDIRVKIDRKTGN
                     ATFTRARTVVDEEELENYQAQLTPAQAKPYFEAPGDGRALWIRDGAAIEDFSGAPQPG
                     DVFEEQVPPVDLGRIAAQSAKQVILQRVREAERDRQYEEFKDRAGTIINGIVKREEYG
                     NIIVDIGRGEAILRRNEKIGRESYRPNDRIRAYVKDVRRETRGPQIFLSRTDPQFMAE
                     LFKMEVPEIYDGIIEIKAVARDPGSRAKIAVISYDNSIDPVGACVGMRGSRVQAVVGE
                     LQGEKIDIIPWNDDQATFLVNALQPAEVSKVVFDEDANKIEVVVPDEQLSLAIGRRGQ
                     NVRLASQLTGLDIDILTEEEESKRRQAEFNARTALFMEALDLDEFFAQLLVAEGFTDL
                     EEVAYIDQDELLTIDGVDQGTAEELQARARDVLEARAKAALENARALGAEDSLIDFEG
                     LTPQMVEALAKDDVKTLEDFATCADWELAGGWTTVNGQRVKDEGLLEPFEVSLEEAQT
                     MVMTARVMLGWVDPDELVAASANTAEGETAE"
BASE COUNT          331 a          498 c          544 g          247 t
ORIGIN      
        1 ggtcgcgcgc gagaagatga tcgagccgga actggtcatc gaggcgatgg aggacagcct
       61 cgcccgcgcc gccaagtcgc gctacgggtc cgagatggac atccgcgtca agatcgaccg
      121 caagaccggc aatgccacct tcacccgcgc ccggaccgtc gtggacgagg aagagcttga
      181 gaattatcag gcgcagctta ccccggcgca ggccaaaccc tatttcgagg cgcccgggga
      241 cgggcgcgcc ctctggatcc gcgatggtgc cgcgatcgag gatttctcgg gcgcgccgca
      301 gcccggcgac gtgttcgagg agcaggttcc gcccgtcgat ctgggccgca tcgccgcgca
      361 atcggccaag caggtgatcc tgcaacgggt ccgcgaggcc gaacgcgacc gccaatacga
      421 ggaattcaag gaccgcgccg gcacgatcat caacggtatc gtcaagcgcg aggaatacgg
      481 caacatcatc gtcgacatcg gtcgtggaga ggcgatcctg cgccgcaacg aaaagatcgg
      541 ccgcgaaagc tatcgcccga acgaccgcat ccgcgcctat gtcaaggacg tgcgccgcga
      601 gacccgcggg ccgcaaatct tcctgtcgcg caccgatccg caattcatgg cggaactgtt
      661 caagatggag gtgccggaaa tctacgatgg catcatcgag atcaaggccg tggcccgcga
      721 tccgggcagc cgcgccaaga tcgcggtcat cagctatgac aacagcatcg acccggtcgg
      781 tgcctgcgtg gggatgcgtg gctctcgcgt gcaggccgtg gtcggcgaat tgcagggcga
      841 gaagatcgac atcatcccgt ggaacgatga tcaggcgaca ttcctcgtga acgccctgca
      901 accggccgag gtcagcaagg tcgtcttcga cgaggacgcc aacaagatcg aggtcgtggt
      961 gccggatgaa cagctcagcc tcgccatcgg ccgtcgcggc cagaatgttc gcctggccag
     1021 ccagctgacc ggtctggata tcgacatcct gaccgaggaa gaggaatcga agcgccgtca
     1081 ggccgagttc aacgcccgca ccgcgctgtt catggaggcg ctggatctgg acgaattctt
     1141 cgcgcagctt ctggtcgccg aaggcttcac cgatctggaa gaggtggcct atatcgacca
     1201 ggacgagctg ctgaccatcg acggcgtgga ccagggcacg gccgaggaat tgcaggcgcg
     1261 cgcccgcgac gtgctggaag cccgcgccaa ggccgcactg gagaatgccc gcgccctggg
     1321 tgccgaggac agccttattg acttcgaggg gctcactccc cagatggtcg aggcattggc
     1381 aaaggatgac gtgaagacgc tggaagactt tgccacttgc gccgattggg aactggccgg
     1441 cggctggacc acggtcaatg gccagcgcgt caaggatgag gggcttctgg agcctttcga
     1501 ggtctcgctg gaggaggcgc agacgatggt gatgacggcc cgcgtcatgc tgggctgggt
     1561 cgatccggac gaactggtcg ccgcgtctgc caatacggcc gaaggcgaaa ccgcagagga
//
LOCUS       DTVW01000154            1164 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1211639, whole
            genome shotgun sequence.
ACCESSION   DTVW01000154 DTVW01000000
VERSION     DTVW01000154.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1164)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1164)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1164
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1211639"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1145)
                     /locus_tag="EYO87_02055"
     CDS             complement(<1..1145)
                     /locus_tag="EYO87_02055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64785.1"
                     /translation="METAEALGQTFARRNSKQQEWEVYRQKADGIKADKSRIVKAERA
                     ASIAPIWQTLQAVLQDVKDKQAAIINAHSDKEKAGCRVNKAKVAVNTATESYQQRDTL
                     KAEESKISGYRDKLAAYQAFKATALRVGEHHERAIAKKTALQQQDKAIEQALISLHKE
                     FEALAQATVIKADIVEQKLKAKGRYDQRLELAAARTELEVVNQAYQQQKAHYESADTC
                     FKQLEKEANRIEMLWFSNQAAVLAAKLEAHQPCAVCGSLEHPDPAHFAADAADINQAA
                     VEQARQAQANQFKVMNANKESMMGCLHAVTDKQKDINALVTALGDEAGKSVLETEQVY
                     KGLEQDLKTIEAKEIQLLKAKQDLRDQEQARLPIAQQMQVLEGQLPE"
BASE COUNT          253 a          315 c          211 g          385 t
ORIGIN      
        1 aattcaggta attgaccctc cagcacttgc atctgctgag caataggtaa gcgcgcctgt
       61 tcttgatccc tcagatcttg cttcgctttg agtaattgaa tttctttagc ctcaatggtc
      121 tttaaatcct gctctaatcc cttataaacc tgctctgttt ctagcaccga ctttccagcc
      181 tcatcaccta atgccgtcac taaagcatta atatcttttt gtttatctgt gaccgcatgc
      241 aaacagccca tcatgctttc tttattcgca ttcatcacct taaattggtt cgcctgcgct
      301 tgacgcgcct gctccaccgc tgcttgatta atgtctgctg catctgccgc aaaatgcgca
      361 ggatcaggat gctcaagact gccacacaca gcacaaggtt gatgcgcctc aagttttgcg
      421 gccagtaccg cagcttgatt agaaaaccac agcatttcta tgcgattggc ttctttttcc
      481 agctgtttaa aacaagtatc cgctgactca taatgcgctt tttgttgctg ataagcctga
      541 ttcacaacct ccagttcagt acgcgctgct gccaattcaa gacgctgatc ataacgtcct
      601 ttagccttca gcttttgctc aacaatatcg gctttaataa ccgttgcctg cgctaacgct
      661 tcaaactctt tgtgtaatga gattaacgct tgttcaatgg ctttatcttg ctgctgtaat
      721 gccgtttttt tagctattgc ccgttcgtga tgctccccga cccttaacgc agtcgctttg
      781 aatgcttgat atgccgctaa tttatcccga taaccgctga tcttgctttc ttcggctttc
      841 agcgtatctc gttgctggta actctctgtc gcagtattca ctgcaacctt tgccttatta
      901 acacgacaac ctgctttttc cttatcactg tgcgcattaa taattgcggc ctgcttatct
      961 ttaacatcct gcaaaacagc ttgtaaagtt tgccagattg gtgcaattga tgccgctcgt
     1021 tcagccttta cgatacgaga tttatccgct ttaatcccat ccgccttttg ccgataaact
     1081 tcccattcct gttgtttact attgcgacgc gcaaaagttt ggcctaaagc ttctgcggtt
     1141 tccaacacta ttgccgcttg ttgt
//
LOCUS       DTVW01000155            4975 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1213239, whole
            genome shotgun sequence.
ACCESSION   DTVW01000155 DTVW01000000
VERSION     DTVW01000155.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 4975)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4975)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4975
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1213239"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..882)
                     /locus_tag="EYO87_02060"
     CDS             complement(<1..882)
                     /locus_tag="EYO87_02060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64786.1"
                     /translation="MLACVILPSDTRELTRRLFAVSPLVERCGTLAFLDVSGTSRLHG
                     GTAGLFAAIATALLPERALGMSLASNRFTAEVAARHGRGPVAIAPGDEALYLSRLPLS
                     VLPWSPDLARRLGPLGLETLGDFASLPSGSVERRYGREGLALHALARGQDEAGLLPER
                     DEQPVFVAREVSGGADGLARLAPVLEEALGCLCASLSERGLGIARLELTLVLDDTCDG
                     APLSGRDPEEDADPTMPAKTVFVVSPAAPETRVGLLLDLLSSRLAADPPPGPVLELSL
                     QALQIAEFAVHQNQLFGE"
     gene            819..1427
                     /locus_tag="EYO87_02065"
     CDS             819..1427
                     /locus_tag="EYO87_02065"
                     /inference="COORDINATES: protein motif:HMM:PF01925.17"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HIC64787.1"
                     /translation="MRRTDAGSTRECRRAGSHRRAWVGCPSVQYHFLLPALIGVPVGT
                     ALLLAVSETTIRLVIAAIMLAYGGFFTLGRSVPRIHGPTPVIDTLVGLAGGVMGGAAG
                     LSGVLPTMWCALRPWPRNETRAVLQVFNQVILTASAILFAWRGLYTPRVLLMAAISLP
                     VAVIAAQAGIVIFRRLSDDLFRRLLIWTLFGSGILIALREMF"
     gene            complement(1424..2293)
                     /locus_tag="EYO87_02070"
     CDS             complement(1424..2293)
                     /locus_tag="EYO87_02070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009814151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dibenzothiophene desulfurase"
                     /protein_id="HIC64788.1"
                     /translation="MHPAPSVIIFTVLSGAGFGYLAFLGPGFATTGWPAFWQFALAFA
                     MAAGGLISSIFHLGNPQRGLLAFTQWRTSWLSREGWAAVTTLLVMALFAIAAIFFGRV
                     LLPLGIIGAAMSVATVFVTSMIYAQMKTVPRWNSPLTPAYFIACALTAGALLSGSWAL
                     SIPLLVALGLLQAVGWLTGDGRFAKRGHDMNSATGLSGRVRLFESPHSGSNYLLREFG
                     FQVARRHAAKLRLIGIGLIAVLPAIVLLFGRHPALFGLAFALHLAGAFVSRWLFFAEA
                     RHVVQLYYGRQAA"
     gene            complement(2293..3039)
                     /locus_tag="EYO87_02075"
     CDS             complement(2293..3039)
                     /locus_tag="EYO87_02075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008203541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HIC64789.1"
                     /translation="MTALPERTERKLGLVIDLDTCVGCHACVISCKGWNTENYGAPLS
                     DMDAYGADPVGTFLNRVHSYEIEPEGGGCAQIVHFPKSCLHCEDAPCVTVCPTGASYK
                     RAEDGIVLVNEDACIGCGLCAWACPYGAREMDQAAGVMKKCTLCVDRIYNENLEEVDR
                     VPACVRTCPAGARHFGDLGDPDSAVSQLVAERGGFDLMPEQGTRPVNKYLPPRPRDRL
                     DGGPAPSAPARQPHDASGFFAWLDRALEKI"
     gene            complement(3036..>4975)
                     /locus_tag="EYO87_02080"
     CDS             complement(3036..>4975)
                     /locus_tag="EYO87_02080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014875771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="formate dehydrogenase"
                     /protein_id="HIC64790.1"
                     /translation="GLTAFDGRGVRPDLNAAHPGHRTVLQLMAERYLQPEYAPEAVAD
                     RCGIPAARIRAVADEIARVAFDEAIVLDRPWTDFRGERHDTMTGRPVAFHAMRGISAH
                     SNGFQTCRALHMLQILLGSIEVPGGFRFKPPYPKPATAHPKPHCKVTPDTPLDGPHLG
                     FVHGPEDLALKEDGSPARIDKAFTWENPMSAHGLMHMVISNAHAGDPYRIDTLFMYMA
                     NMSWNSSMNTGGVMKMLTDTDENGDYVIPRIIYSDAYASEMVAYADLILPDTTYLERH
                     DCISLLDRPISEAGAAADAIRWPVVEPDRDVRGFQTVLIQLANLMKLPGFVHEDGRPK
                     WRDYADYIVNHERKPGIGPLAGFRGDGREVGRGAPNPDQLKRYVDNGGFFVSHIPEGA
                     DFYKPWNMDYQDWAVGMGLYDAPQPYLFSLYVEPLRKFQRAAEGHGERQPPDHLRDRL
                     RRVMEPLPIWYPPFEDDHADPAEYPIHALTQRPMAMYHSWGGQNAWLRQIHGRNPMYL
                     PRGIWESHGFADGDWARLSSVHGSITVPVALHAGLNGSTIWTWNAIGKRKGAWALDED
                     APEATKGFLLNHLIHELLPPKGDGMRWSNSDPITGQAAWFDLRVKIEKVPPQDEADPG
                     FAAIASPVGRGPRNLRWKVGR"
BASE COUNT          821 a         1632 c         1747 g          775 t
ORIGIN      
        1 ctcgccgaag agctggttct ggtgcaccgc aaactcggcg atctgcaggg cctgcaggct
       61 cagttcgagc acggggcccg ggggaggatc ggccgccagg cgcgacgaga gcaaatcgag
      121 cagcaggccc acccgggtct ccggggcggc cggcgacacc acgaagacgg tcttggcagg
      181 catcgtcggg tcggcgtctt cttccgggtc tcttccagaa agcggcgcac cgtcacacgt
      241 gtcgtcgagg accagggtca actcgagtcg ggcgatgccc agtccgcgct cggacaggct
      301 ggcgcacagg cagcccaggg cctcctcgag cacgggggcc aggcgcgcca ggccgtcggc
      361 gccaccggaa acttcgcgag ccacgaacac aggctgttcg tcgcgctcgg ggagcagccc
      421 ggcttcgtcc tgtccccggg cgagggcgtg cagggccagg ccttccctgc cgtaacgccg
      481 ctcgaccgaa cccgacggca agctggcgaa atcgcccagg gtctcgagcc ccagcgggcc
      541 cagccgacgc gcgaggtcgg ggctccaggg caacaccgac aggggcaggc gcgagaggta
      601 cagggcctcg tctcccgggg cgatggcgac cggcccccgg ccgtgacggg ccgccacctc
      661 ggcggtgaaa cgattgctcg ccagggacat gcccagcgct cgctcgggca gcagcgccgt
      721 cgcgatcgcc gcgaagagcc cggccgttcc gccgtgcaga cgcgaagtgc cgctcacgtc
      781 gaggaacgcc agggtgccgc agcgctcgac caggggcgat acggcgaaca gacgccgggt
      841 caactcgcga gtgtcggagg gcaggatcac acaggcgagc atgggtcggc tgcccgtccg
      901 tccagtacca cttcctgctg ccggcgctga tcggggttcc ggtcgggacg gcgctgctgc
      961 tggcggtcag cgagacgacg atccgcctgg tcatcgccgc gatcatgctg gcctatggcg
     1021 gcttcttcac gctgggccgc agcgtgcccc ggatccacgg gccgacgccg gtgatcgata
     1081 cgctggtggg cctggccggc ggggtcatgg gcggagctgc cggcctgtcc ggggtcttgc
     1141 cgacgatgtg gtgcgccctg cggccatggc cccggaacga gacccgcgcc gtgctgcagg
     1201 tgttcaatca ggtgatcctg acggcctcgg cgatcctgtt cgcgtggcgg ggactttaca
     1261 cgccccgggt tctgctgatg gccgcgatca gcctgccggt ggcggtgatc gcggcgcagg
     1321 cggggatcgt gatcttccgc cggctcagcg acgacctgtt ccggcggctg ctgatctgga
     1381 cactgttcgg atccgggatc ctcattgccc tgcgcgagat gttctaggct gcctggcgcc
     1441 cgtaataaag ctgcacgaca tgacgcgcct cggcgaagaa cagccagcgc gacacgaagg
     1501 cgccggccag atgcagtgcg aaagccagcc cgaacagggc cggatgcctg ccgaacagaa
     1561 ggacgatcgc gggcaggacc gcgatcagac cgatgccgat cagcctcagc ttggcagcgt
     1621 ggcgccgggc gacctgaaag ccgaattccc gaagcaggta attgctgccg ctgtgggggg
     1681 attcgaacag gcgcacccgg cccgacagcc cggtggccga gttcatgtcg tggccgcgtt
     1741 tggcgaagcg gccgtcgccc gtcagccagc cgaccgcctg caagagcccc agggccacca
     1801 gcagcggaat cgacagcgcc catgatccgg acagcagcgc cccggcggtc agcgcgcagg
     1861 cgatgaaata ggccggtgtc aggggcgagt tccagcgcgg caccgtcttc atctgcgcat
     1921 agatcatcga ggtgacgaac acggtcgcga ccgacatggc cgcgccgatg atgcccagcg
     1981 gcagcagcac ccggccgaag aagatcgcgg cgatggcgaa aagcgccatc accagcaatg
     2041 tcgtgaccgc cgcccagcct tcgcgcgaca gccagcttgt gcgccattgg gtgaacgcca
     2101 gcaggccgcg ctgcggattg ccgaggtgga agatggacga gatcagcccg cccgcggcca
     2161 tcgcgaaggc cagcgcgaat tgccagaagg ccggccagcc tgtcgtggcg aatccaggac
     2221 ccagaaaggc cagatagccg aagcccgcgc ccgacaggac ggtaaagatg atgacggaag
     2281 gggccggatg catcagatct tctccagcgc gcggtcgagc caggcgaaga agcctgacgc
     2341 atcgtgcggt tgccgggccg gcgccgacgg ggccggcccg ccatccagcc ggtccctggg
     2401 ccgcggcggc aggtatttgt tgaccggtct ggttccctgt tccggcatca ggtcgaaacc
     2461 gccgcgttcg gccaccagct ggctgacggc gctgtccgga tcgcccagat cgccgaaatg
     2521 gcgcgctccg gccgggcagg tgcgcacgca ggcgggcacg cggtccacct cttccaggtt
     2581 ctcgttgtag atgcggtcca cgcagagcgt gcatttcttc atcacgcccg cggcctgatc
     2641 catttcccgc gcgccatagg ggcaggccca ggcgcacagg ccgcagccga tgcaggcatc
     2701 ctcgttgacc agcacgatcc cgtcctcggc gcgcttgtag ctggcgcctg tcgggcagac
     2761 ggtgacgcag ggcgcgtcct cgcaatgcag gcaggatttg gggaaatgga cgatctgcgc
     2821 gcagccgccg ccctcgggct cgatctcgta gctgtggacg cggttcagga aggtgccgac
     2881 cggatcggcg ccataggcat ccatgtccga cagcggcgca ccgtaatttt cggtgttcca
     2941 gcccttgcag ctgatcacgc aggcatggca gccgacgcag gtgtcgaggt cgatgacaag
     3001 gcccagcttg cgttcggtcc gttccggcag cgcggtcatc tgcccacctt ccagcgcagg
     3061 ttgcgcgggc cccggccgac gggcgaggcg atggccgcga atccgggatc ggcctcgtcc
     3121 tgcggcggca ccttctcgat cttcacgcgc aggtcgaacc aggctgcctg accggtgatc
     3181 gggtcggaat tggaccagcg catcccgtcg cctttcggcg gcagcaattc atggatcagg
     3241 tggttcaaga gaaagccttt cgttgcctcg ggcgcgtcct cgtccaacgc ccatgcgccc
     3301 ttgcgtttgc cgatggcgtt ccaggtccag atggtgctgc cgttcagccc ggcatgaagg
     3361 gcgaccggaa cggtgatgct gccatggacc gaactgagcc gcgcccagtc gccatcggcg
     3421 aagccgtgcg attcccagat cccgcgcggc agatacatcg ggttccgccc gtggatctgg
     3481 cgcagccagg cattctggcc accccacgaa tgatacatcg ccatcggtcg ctgggtcagg
     3541 gcgtggatcg ggtattcggc gggatcggcg tgatcgtcct cgaacggggg ataccagatc
     3601 ggcagcggct ccatcacccg gcgcagccgg tcgcgcaggt ggtcgggggg ctggcgctcg
     3661 ccgtggcctt cggcggcgcg ctggaacttg cgcagcggct cgacatagag gctgaagagg
     3721 tagggctgcg gcgcgtcgta aaggcccatg ccgacggccc aatcctggta atccatgttc
     3781 cacggcttgt agaaatcggc gccctcgggg atatgcgaga cgaagaaccc gccattgtcg
     3841 acatagcgtt tcaactggtc ggggttcggc gccccgcgtc ccacctcgcg gccatcgccg
     3901 cgaaagcccg ccagcggacc gatgcccggc ttgcgttcgt ggttgacgat gtaatcggca
     3961 taatcgcgcc atttcgggcg gccatcctcg tgcacgaagc cgggcagttt catcaggttc
     4021 gccagctgga tcagcacggt ctgaaagccg cgcacatcgc ggtcgggttc gaccaccggc
     4081 cagcggatcg catccgcggc ggcgccggcc tcggagatcg ggcgatccag caggctgatg
     4141 cagtcgtggc gttccagata ggtcgtgtcg ggcaggatca ggtcggcata ggccaccatc
     4201 tcggatgcgt aggcgtcgga atagatgatg cgcgggatga cgtaatcgcc gttctcgtcg
     4261 gtatcggtca gcatcttcat gacgccgccg gtattcatcg acgaattcca cgacatgttc
     4321 gccatataca tgaacagcgt gtcgatccgg tagggatcgc cggcatgggc gttcgagatc
     4381 accatgtgca tcagcccatg cgccgacatc gggttttccc aggtgaaggc cttgtcgatc
     4441 cgggccgggc tgccgtcctc cttcagcgcc agatcctcgg ggccgtggac aaagcccaga
     4501 tgcgggccgt ccagcggcgt gtcgggcgtc accttgcaat gcggtttcgg atgggcggtc
     4561 gcgggttttg gatagggcgg cttgaagcgg aacccgcccg gcacctcgat ggaacccagc
     4621 aggatctgca gcatgtgcag cgcgcggcag gtctggaagc cgttggaatg ggccgagatg
     4681 ccgcgcatgg cgtggaaggc caccgggcgt ccggtcatgg tgtcgtgccg ctcgccccgg
     4741 aaatcggtcc agggacggtc cagcacgatc gcctcgtcaa aggccacgcg cgcgatctcg
     4801 tcggcgacgg cgcggatgcg ggcggcgggg atgccgcagc ggtcggcgac cgcctcgggg
     4861 gcgtattcgg gttgcagata gcgttcggcc atcagctgca acaccgtgcg atggccggga
     4921 tgggcggcat tcaggtcggg gcgcacgccc ctgccgtcga aggcggtcag cccgc
//
LOCUS       DTVW01000156            1237 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1213401, whole
            genome shotgun sequence.
ACCESSION   DTVW01000156 DTVW01000000
VERSION     DTVW01000156.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1237)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1237)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1237
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1213401"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..267
                     /locus_tag="EYO87_02085"
     CDS             <1..267
                     /locus_tag="EYO87_02085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018000000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotate phosphoribosyltransferase"
                     /protein_id="HIC64791.1"
                     /translation="TDGGSKLSFVDAIRETGATCAHTAVIFYYGIFPETTRRLADHGV
                     RLHHLCTWWDVLAEAQAAQSFDDRTLAEVRTFLTDPRGWQAANG"
     gene            368..>1237
                     /locus_tag="EYO87_02090"
     CDS             368..>1237
                     /locus_tag="EYO87_02090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999999.1"
                     /note="unwinds double stranded DNA; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HIC64792.1"
                     /translation="MNGLRAIIPGQDSAAEEKAAIPYSLEAEQQLLGALLTNNDVFDR
                     VTQVIKPEHFYHPVHARIFEICSERIRKNALASPVTIKAFLENDEGLKELGGPAYLAR
                     MASAAISAYAARDYAQMIREFALRRELIQLGHDISSRASTVEVGDDAEEQIKVAEQTL
                     YQLGEQGVAERGFQSFLKAVTGAVQVANAAYQRDGKLSGISTGLVDLDGKMGGLNNSD
                     LIIIAGRPSMGKTSLATNIAFNIARAHKQGERADGTHGTIEGGVVGFFSLEMSAEQLA
                     ARILSEAAEVPSER"
BASE COUNT          244 a          386 c          402 g          205 t
ORIGIN      
        1 accgacggcg gcagcaagct gtcctttgtc gatgccatcc gcgaaaccgg cgcaacctgc
       61 gcgcacacgg cggtgatctt ctactacggt atcttccccg aaacgacccg gcgactggcc
      121 gatcacggcg tcaggctgca ccatctctgc acctggtggg acgtgctggc cgaggcccag
      181 gccgcgcaat ccttcgacga ccggacgctt gccgaggtcc gcaccttcct gaccgatccg
      241 cgcggctggc aggcggcgaa tggctgacgg gccggcttat ccacagcctg tccacaggat
      301 atcccgatag ccgcgcctgt cccgatatga gataaacgcc caaacaagaa tcggcggggg
      361 cagcgagatg aacggtttgc gggcgatcat tccggggcag gattcggcag ccgaggaaaa
      421 ggccgccatc ccctattcgc tggaggccga acagcaattg ctgggcgcgc ttctgacgaa
      481 caacgatgtc ttcgaccggg tgacgcaggt catcaagccg gaacatttct atcaccctgt
      541 ccatgcccgc atcttcgaga tttgttccga acggatccgc aagaatgcgc tggccagccc
      601 ggtgacgatc aaggcgttcc tggaaaacga cgaggggctg aaggaactgg gggggccggc
      661 ctatctggcg cgcatggcca gcgccgcgat ctcggcctat gcggcgcggg attatgcgca
      721 gatgatccgc gaattcgcgc tgcggcgcga actgatccag ttgggccatg acatctcgtc
      781 gcgcgcctcg acggtcgagg tgggcgacga tgccgaggaa cagatcaagg tcgccgaaca
      841 gacgctgtat caactgggcg aacagggtgt ggcggagcgc ggattccagt ccttcctgaa
      901 ggcggtgacg ggtgcggttc aggtggccaa tgccgcctat cagcgggacg gcaagctgtc
      961 cgggatttcg accgggctcg tggatctgga cggcaagatg ggcggtctga acaattccga
     1021 cctgatcatc atcgccgggc gtccctcgat gggcaaaacc tcgctggcaa ccaatatcgc
     1081 cttcaacatc gcccgcgcgc acaagcaggg cgaacgcgcc gacggcaccc atggcacgat
     1141 cgagggcggc gtggtcggct ttttcagcct cgagatgtcg gccgagcaac tggccgcacg
     1201 gatcctgtcc gaagccgccg aggtgcccag cgaaaga
//
LOCUS       DTVW01000157            1174 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1216854, whole
            genome shotgun sequence.
ACCESSION   DTVW01000157 DTVW01000000
VERSION     DTVW01000157.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1174)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1174)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1174
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1216854"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>1174
                     /locus_tag="EYO87_02095"
     CDS             <1..>1174
                     /locus_tag="EYO87_02095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase I"
                     /protein_id="HIC64793.1"
                     /translation="EATLVKRMEELGIGRPSTYASIVTTIQDREYVRKDKNRLIPEDK
                     GRLVTTFLVKYFPRYVSYDFTADLENELDEISAGDLVWREVLGRFWKDFSKALEGTSE
                     LRISEVLEAIDDALAPHLYPPRADGGDPRECPLCGRGRLNLKTARSGGAFIGCTNYPE
                     CRYTRPLSAPDGEQPVGDRVLGHDDGDEISLKTGRFGPYVQRGEATEEVPKPPRASIP
                     KGWDAATMDLEKALRLLSLPRPVGPHPDDGVMIEAGIGRYGPYVKHDRKYANLPDVDE
                     VFTIGMNRAVEVLAAKQTRGRAAAAAPLKELGDHPEGGAIQVMNGRYGPYVKWEKVNA
                     TLPREVAPEDITMEQALELILAKAAKKGTKKASAGKSPARKSATKTAKTAKTAKTAK"
BASE COUNT          244 a          349 c          395 g          186 t
ORIGIN      
        1 gaggccaccc tggtcaagcg gatggaggaa ctgggcatcg gccgtccctc gacctatgcc
       61 agcatcgtca cgaccatcca ggaccgcgaa tacgtccgaa aggacaagaa ccggctgatc
      121 cccgaggaca agggccggct ggtcacgacc tttctggtca agtatttccc gcgttatgtc
      181 agctatgact tcaccgccga tctggaaaac gaactggatg agatcagcgc cggcgatctg
      241 gtctggcgcg aggttctggg caggttctgg aaggattttt caaaggcgct ggagggcacg
      301 tccgaacttc gcatctccga ggttctggag gcgatcgacg atgcgctggc gccgcatctg
      361 tatccgccgc gcgccgatgg cggcgatccg cgcgaatgcc cgctttgcgg caggggccgg
      421 ctgaacctca agaccgcgcg gtcggggggc gccttcatag gctgcacgaa ctatcccgaa
      481 tgccgctata cccgccccct ctccgccccc gatggcgagc agccggtggg cgaccgggtg
      541 ctgggtcatg acgatggcga cgagatcagc ctgaagaccg ggcgtttcgg accctatgtg
      601 cagcggggcg aggccaccga agaggtgccg aagccgcctc gggcctcgat ccccaagggc
      661 tgggacgcgg cgaccatgga tctggaaaag gcgttgcgac ttctgtcgct gccgcgcccg
      721 gtcggaccac atcccgatga cggcgtgatg atcgaggcgg ggatcgggcg ctatggtccc
      781 tatgtgaagc atgatcgcaa atacgccaac ctgccggatg tggacgaggt ctttaccatc
      841 ggcatgaacc gggcggtcga ggtgctggcg gcaaagcaaa cgcgcggacg cgccgctgcg
      901 gcggcaccgc tgaaggaact gggtgatcat cccgaagggg gtgcaattca ggtgatgaac
      961 gggcgctatg gcccttatgt caaatgggaa aaggtcaatg cgaccctgcc ccgcgaggtt
     1021 gcgcccgaag acatcacgat ggagcaggcg ctggagttga tcttggccaa ggccgcgaag
     1081 aagggcacga agaaggcatc ggcgggaaag tccccggcaa ggaaatccgc caccaagacc
     1141 gcaaagactg ccaagactgc caagactgcc aaga
//
LOCUS       DTVW01000158            2729 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1217903, whole
            genome shotgun sequence.
ACCESSION   DTVW01000158 DTVW01000000
VERSION     DTVW01000158.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2729)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2729)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2729
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1217903"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..302)
                     /locus_tag="EYO87_02100"
     CDS             complement(<1..302)
                     /locus_tag="EYO87_02100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014873811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphate aldolase"
                     /protein_id="HIC64794.1"
                     /translation="MTLATLSQVLQPALRDGYAVAGLVTLGWEDMRAYVAAAEAEGVP
                     VILQAGPSCREHTPLPVLGAMFRHLAEHASIPVVAHLDHGYSSDECRMAIDAGFTSV"
     gene            complement(299..1156)
                     /locus_tag="EYO87_02105"
     CDS             complement(299..1156)
                     /locus_tag="EYO87_02105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007197764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-deoxy-glucuronate isomerase"
                     /protein_id="HIC64795.1"
                     /translation="MHIAPHDNANTPIVDVDHDLVPLNYFNIVKLKKGEGFDYAVPGY
                     ETCVVPATGTVDLDVEGAIFDRLGRRGVDVWDGEPEGVYVPVGARTRLTCVSDTAEIF
                     IAGAKFDRVLEPFDVREAELDLVQYGSDETKTHRKIKHILGSRQHGRVGRLLVSELYT
                     VGQGGWSGFPSHKHDSDRVDEDGKIVETRHDETYNFRFRPDYGSGMQMLQREDNVPGD
                     AYHIMNGSTILIDKGYHPCAVLPGYEMYYFTILGGLSQRSLKQYFQPTHAEQLHTIPG
                     IMDMVAKFK"
     gene            complement(1169..2149)
                     /gene="iolC"
                     /locus_tag="EYO87_02110"
     CDS             complement(1169..2149)
                     /gene="iolC"
                     /locus_tag="EYO87_02110"
                     /EC_number="2.7.1.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008035774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-dehydro-2-deoxygluconokinase"
                     /protein_id="HIC64796.1"
                     /translation="MDRLIDGIRKGRFVVLGRAGMDMFAEPPGTKAEHAETFRADLGG
                     SSANICAGLCKLGMQSALVTSVSDDTVGRFCTNKLRGYGVDTRYVKVLGGEHRVSLAV
                     YESTMEDFQLCIYRNNAVDFQVTEADVDRVDYAAFGALVTAGTVFAAEPSRSSTFRAF
                     EKAREAGLPVIFDIDYRAYSWPSPQVASMVLIRAGEESDLIVGNDEEFGFMAGGLDKG
                     LDKAREFAAAGKTVIYKMGHKGAITFAEGREIRSGIYPVTAVKPNGAGDSFLAGLLAA
                     LAGGRPLEEAVLRGSACASIVVSRPGCAPAMPTAAELDDFLAAHPGPSNT"
     gene            complement(2149..>2729)
                     /locus_tag="EYO87_02115"
     CDS             complement(2149..>2729)
                     /locus_tag="EYO87_02115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014879338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="3D-(3,5/4)-trihydroxycyclohexane-1,2-dione
                     acylhydrolase (decyclizing)"
                     /protein_id="HIC64797.1"
                     /translation="LETGTVDVEFGFSCMGYEIAGAWGARIAQAEQEPDRDTITFCGD
                     GSYLLLNSDIYSSVLSQKKLIVLVLDNGGFAVINKLQNNTGNESFNNLLEHCPTIPQP
                     FGVDFAAHAASMGAAAQKVANPTELAEAFKRAKASDKTCVIVMEVDPYEGWTTEGHAW
                     WEVGTPHVSDSEKVRAAHEEWETTRAKQRRGV"
BASE COUNT          474 a          865 c          875 g          515 t
ORIGIN      
        1 accgaagtga accccgcatc gatggccatg cggcattcgt cgctgctgta gccgtgatcg
       61 agatgcgcaa ccaccgggat ggaggcatgt tcggccaggt gccggaacat ggcgcccagc
      121 acgggcagcg gcgtatgctc gcggcaggac ggaccggcct gcaggatcac cggcaccccc
      181 tcggcctcgg cagcggccac ataggcgcgc atgtcctccc agccgagggt gacaagcccg
      241 gccacggcgt atccgtcccg cagcgcgggc tgcagcacct gcgaaagtgt cgccagagtc
      301 atttgaactt ggccaccatg tccatgatcc ccggtatcgt gtgcaattgt tcggcatggg
      361 tcggctggaa atactgtttc aggcttcgct ggctcagccc gccgaggatg gtgaaataat
      421 acatctcgta gcccggcagc acggcgcagg ggtgatagcc cttgtcgatc aggatcgtcg
      481 agccgttcat gatgtggtag gcatcgcccg gcacgttgtc ctcgcgctga agcatctgca
      541 tgcccgagcc gtaatcgggc cggaagcgga aattgtaggt ctcgtcgtgc cgggtctcga
      601 cgattttccc gtcctcgtcc acgcgatcgg aatcgtgctt gtggctggga aagcccgacc
      661 agccgccttg cccgacggta tacagttccg ataccagaag gcggcccacc ctgccgtgct
      721 gcctggagcc gaggatgtgc ttgatcttgc ggtgggtctt ggtctcgtcc gagccgtatt
      781 gcacgaggtc gagttcggcc tcgcgaacat caaacggctc gagcaccctg tcgaacttcg
      841 ccccggcgat gaatatttcg gccgtgtcgc tgacgcaggt cagccgggtc cgcgcgccga
      901 ccggaacata gacgccctcg ggctcgccgt cccagacatc gacgccgcga cggccaagcc
      961 gatcgaatat cgcgccctcg acatccagat cgaccgtgcc ggtcgcgggc acgacgcagg
     1021 tctcgtagcc cggaacggca tagtcgaaac cttcaccctt tttcagcttg acgatgttga
     1081 agtagttcag cggcacgagg tcgtggtcga catcgacgat cggggtgttg gcattgtcat
     1141 ggggggcgat atgcatctgc ctctcctttc aggtgttgct ggggccggga tgcgcggcga
     1201 gaaaatcgtc aagctcggcc gcggtgggca tggcaggggc acagccgggt cggctgacca
     1261 cgatcgaggc gcaggccgag ccgcgcagga cagcctcctc gagcggtcgc cccccggcaa
     1321 gtgcggccag cagtcccgcg aggaagctgt cccccgcgcc gttgggcttg acagctgtga
     1381 cggggtagat tccggaacgg atctctctgc cctcggcgaa ggtgatcgcg cccttgtggc
     1441 ccatcttgta gatcaccgtc ttgcccgccg cagcgaattc gcgggccttg tccagtccct
     1501 tgtccagtcc gccggccatg aagccgaatt cctcgtcatt gccgacgatc aggtcgcttt
     1561 cctcgcctgc acggatcagc accatcgagg cgacctgcgg cgaaggccag ctataggcgc
     1621 ggtagtcgat atcgaagatc accggcaggc ccgcctcgcg ggctttctcg aaggcccgga
     1681 aggtcgagga ccgcgagggc tcggccgcga agacggtgcc tgcggtgaca agcgcgccga
     1741 aggcggcgta gtcgacccgg tccacgtctg cctccgtgac ctgaaaatcg accgcgttgt
     1801 tgcggtagat gcaaagctgg aaatcctcca tcgtgctttc gtacacggca agagaaacgc
     1861 gatgctcgcc gcccagaacc ttcacatacc gggtgtcaac gccgtagccg cgcagcttgt
     1921 ttgtgcagaa gcggcccacg gtgtcgtcgc tgaccgaggt gaccagcgcc gattgcattc
     1981 ccagcttgca aagtcccgcg cagatattgg ccgatgagcc gccaagatcg gcacggaagg
     2041 tttcggcatg ttcggccttg gtgccgggtg gctcggcgaa catgtccatg ccggcgcgtc
     2101 ccagcacgac gaagcggcct ttgcgaatac cgtcgatcag acggtccatc acacgccccg
     2161 ccgctgcttg gcgcgggtgg tttcccattc ttcatgggcg gcacggacct tctcgctgtc
     2221 gctgacatgc ggggtgccga cctcccacca ggcgtgacct tcggtggtcc acccctcgta
     2281 ggggtccact tccatgacga tcacgcaggt cttgtccgat gccttggcgc gcttgaaggc
     2341 ctcggccagc tcggtggggt tggcgacctt ctgggcggcg gcgcccatcg aggccgcatg
     2401 ggccgcaaag tccacgccga agggctgcgg gattgtcggg caatgttcca gaagattgtt
     2461 gaagctttcg ttcccggtat tgttctgcag cttgttgatg accgcgaagc cgccgttgtc
     2521 gagcaccagc acgatcagtt tcttctggct gagcaccgag gaatagatgt cggaattcag
     2581 caacaggtat gacccatcgc cgcagaaggt gatggtgtcg cggtctggtt cctgctcggc
     2641 ctgggcgatg cgcgcacccc aggcgcccgc gatttcgtaa cccatgcagg aaaaaccgaa
     2701 ctcgacatcc accgtgccgg tctcgaggg
//
LOCUS       DTVW01000159            1719 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1219641, whole
            genome shotgun sequence.
ACCESSION   DTVW01000159 DTVW01000000
VERSION     DTVW01000159.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1719)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1719)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1719
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1219641"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..641
                     /locus_tag="EYO87_02120"
     CDS             <1..641
                     /locus_tag="EYO87_02120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010396192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="NADPH-glutathione reductase"
                     /protein_id="HIC64798.1"
                     /translation="GSHEIVDRVIFATGRAPHSQDLGLERTEVTLRANGAVAVDEWSQ
                     TSVPSIFAVGDVTDRVNLTPVAIREGHSFADTIFGDGPRKVDHGIVASAVYLRPHELG
                     TVGLTEEQARVAGSVDVYATTFRPMRSMFAGSDARTMMKLLVEPETDRVLGCQIFGPE
                     AGEMIQLAAIPITLGATKAQFDATIAVHPTAAEELVTMRHPVRRHRIETMAV"
     gene            769..>1719
                     /gene="hflK"
                     /locus_tag="EYO87_02125"
     CDS             769..>1719
                     /gene="hflK"
                     /locus_tag="EYO87_02125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_353432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsH protease activity modulator HflK"
                     /protein_id="HIC64799.1"
                     /translation="MASQGPWGGGGNGGGDDEDRGKRPSDRPWGNDQPPKGPRRPGGG
                     EQMPEIEELMKKGQERLRVLMGGRGGGGRPNGSGRGPSGPGFGFNRSTLVLGGLVALG
                     LWAFASFYRVQTNEKSVEFLFGRAVAVGSEGLNFAPWPFVTAEVVPVTNERVTEIGTG
                     RSGPMDSGLMLTRDQNIVDMEYQVVWNISDPEKFLFNLADPADTIRAVAESAMRDIIA
                     RSELAPILNRDRGSIANDLKDAVQRTLDAYQSGINVVRVNLDRADPPGEVIDAFREVQ
                     AAQQERDRLEKEADAYANRVLAQARGDAAATLEQAEGYRAE"
BASE COUNT          298 a          550 c          616 g          255 t
ORIGIN      
        1 atggcagcca cgaaatcgtg gaccgggtga tctttgcgac cgggcgcgcg ccgcacagcc
       61 aggatctggg cctggaacgg accgaggtga cgctgcgggc gaacggtgcc gtcgcggtgg
      121 acgaatggtc gcagacctcg gttccctcga tcttcgcggt gggtgatgtc accgaccggg
      181 tcaacctgac cccggtcgcc atccgcgagg ggcacagttt cgccgacacg atcttcggcg
      241 atggcccgcg caaggtcgat cacggcatcg tcgccagcgc cgtctatctg cgcccgcatg
      301 aactgggcac ggtcgggctg accgaggaac aggcccgcgt ggcgggatcg gtcgatgtct
      361 atgcaaccac cttcagaccg atgcggtcga tgttcgccgg ttcggacgcg cgcacgatga
      421 tgaagctgct ggtcgaaccc gagaccgacc gcgtgctggg ctgccagatc ttcggccccg
      481 aggcgggcga gatgatccag ctggccgcga tcccgatcac cctgggcgcg accaaggcgc
      541 agttcgatgc aaccatcgcc gtccatccga ccgcggccga ggaactggtg acgatgcggc
      601 atccggtccg ccggcaccgg atcgaaacga tggcggtctg acggatggag gcgcggcccc
      661 gtgccgcagg cggccgggga aaccggctgg ccggcaaggg ttgaccatcg gccccggccc
      721 cttaagtgtc agtcagggaa attcatcgac gaaaggaaga tcgagcgcat ggcaagtcag
      781 ggcccgtggg gcggcggcgg aaatggcggc ggggatgacg aggatcgcgg caagcgcccg
      841 tcggaccgcc cctggggcaa cgatcagccg ccgaagggtc cgcgccggcc cggcggcggc
      901 gaacagatgc ccgagatcga ggaactgatg aagaagggcc aggaacgtct gcgcgtgctg
      961 atgggcgggc gtggcggcgg cggccgtccg aacggttcgg gtcgcgggcc gtcggggccg
     1021 ggcttcggct tcaaccgctc gacgttggtg ctgggcgggc tggtcgcgct tggcctgtgg
     1081 gcctttgcca gtttctaccg ggtccagacc aacgagaaaa gcgtcgaatt cctgttcggc
     1141 cgcgccgttg cggtgggcag cgagggtctg aactttgcgc cctggccttt cgtcaccgca
     1201 gaagtcgtcc ccgtcaccaa tgaacgcgtg accgagatcg gcaccggccg gtccggtccg
     1261 atggacagcg ggctgatgct gacccgcgac cagaatatcg tggacatgga atatcaggtc
     1321 gtctggaaca tctcggatcc cgagaaattc ctgttcaacc ttgccgatcc ggccgacacg
     1381 atccgggcgg tcgccgaatc ggccatgcgc gacatcatcg cgcggtcgga actggcgccg
     1441 atcctgaacc gcgatcgcgg ctccatcgcc aatgacctga aggatgcggt gcagcgcacg
     1501 ctggacgcct atcagtcggg gatcaacgtg gtccgcgtca acctcgaccg ggccgacccg
     1561 ccgggcgagg tgatcgacgc cttccgcgag gtgcaggccg cgcagcagga acgcgaccgg
     1621 ctggagaaag aggccgacgc ctatgccaac cgcgtcctgg cccaggcccg cggtgatgcc
     1681 gccgcgacgc tggaacaggc cgagggctat cgcgccgag
//
LOCUS       DTVW01000160            1212 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1221689, whole
            genome shotgun sequence.
ACCESSION   DTVW01000160 DTVW01000000
VERSION     DTVW01000160.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1212)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1212)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1212
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1221689"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            3..614
                     /locus_tag="EYO87_02130"
     CDS             3..614
                     /locus_tag="EYO87_02130"
                     /inference="COORDINATES: protein motif:HMM:PF00589.20"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64800.1"
                     /translation="MPKASKQIPRPALSADQLPSFFGRLSGSQMDRVTNLSIRLLMHT
                     AVRPGELIGARWAEVSGDRWIIPAVRMKMERDHIVPLSTQALALLRELKGLAGAGGRF
                     ADLKADTMGKAINKLMGTGIVVPHGFRSTFSTIANDSNLWNPDAIERQLAHAPRNKVR
                     AAYNRALHLEERAKLMQWYSDVLDVAKAKGVLEAQKADPDILI"
     gene            785..>1212
                     /locus_tag="EYO87_02135"
     CDS             785..>1212
                     /locus_tag="EYO87_02135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017883873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional DNA primase/polymerase"
                     /protein_id="HIC64801.1"
                     /translation="MNNKAQTDSAQPFDPDILIDALPGPAHVAIALHLARQGLPVFPC
                     KASGPNVKSPHTAHGFRDATCDPATIEAWWRQWPSALVGFRTGSASGIAVLDLDVKNG
                     KDGIAAARSRGIDPETASPMIQQTLSGTGRHLYFRHSDGQ"
BASE COUNT          266 a          362 c          354 g          230 t
ORIGIN      
        1 cgatgccaaa agcatctaag cagatcccgc gcccggcgct gtcggcggac cagttgccca
       61 gcttcttcgg caggctatcg ggcagccaaa tggatcgcgt caccaatctt tcgatccggc
      121 ttctgatgca caccgccgtg cggccaggcg aattgatcgg cgcccgctgg gctgaggtga
      181 gcggcgatcg gtggatcatc ccagcggtgc gcatgaagat ggaacgcgat catatcgtgc
      241 ccctgtcgac gcaagccttg gctcttctgc gcgaactgaa gggactggcc ggggcagggg
      301 gccgcttcgc cgatctgaag gctgatacga tggggaaggc aatcaacaaa ctgatgggca
      361 ctggaatcgt ggtgccgcat ggtttccggt caacattcag cacgattgcc aacgactcca
      421 atctatggaa cccggacgct atcgagcgtc agcttgccca cgcgccgcga aacaaagtcc
      481 gggctgcata taaccgggcg ctacacctcg aagagcgggc gaaacttatg caatggtatt
      541 cggatgttct cgacgtggcc aaggcaaagg gcgtgctcga agcccaaaag gcagacccgg
      601 atatcctgat atagctatca cattaaatgt gaaagtatgt ttattttcaa tgatttgtgg
      661 actcgcggcg gcgctgtgag gtagagtttc gggataacgg ccacggccca tttatccgaa
      721 gcatgatgcc aaagaaaatg ggccacggag tttgcacctc cgcggccctg attttggtat
      781 ccagatgaac aataaagcac agactgattc cgcgcaaccg ttcgatcccg atatcctgat
      841 cgacgctctg ccggggcctg cccatgtcgc catcgccctg cacctcgccc ggcaagggtt
      901 gccggtcttt ccatgcaagg ccagcggccc gaacgtcaaa agcccccaca cggcacacgg
      961 cttccgagac gccacatgcg accctgccac gattgaggca tggtggcgcc agtggccaag
     1021 cgcccttgtc ggatttcgga caggatccgc cagcggcatt gctgttctcg acctggacgt
     1081 gaagaacggc aaagacggca ttgccgcagc gcggtcgcgc ggcatcgatc ctgaaactgc
     1141 ctcgccgatg atccaacaga ccttatccgg caccgggcgt catctctatt ttcggcacag
     1201 cgacgggcaa ga
//
LOCUS       DTVW01000161            1068 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1222722, whole
            genome shotgun sequence.
ACCESSION   DTVW01000161 DTVW01000000
VERSION     DTVW01000161.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1068)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1068)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1068
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1222722"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(101..>1068)
                     /locus_tag="EYO87_02140"
     CDS             complement(101..>1068)
                     /locus_tag="EYO87_02140"
                     /EC_number="4.99.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HIC64802.1"
                     /translation="IANLGTPDGHDYWSMRRYLNEFLSDRRVIDYPAWKWQPLLQGII
                     LTRRPFTSGKNYKLIWNEERNESPLMTITRDQTAALAARAAEEWGDRVMVDFCMRYGN
                     PSTQEVLDRMVKAGCRRIVFLPLYPHYAGATSATANDQLFRALMAQKWQPSVRTCDPY
                     FDRPDYVQALAASVRHTLGDRKPGRLVASYHGMPKRYLLEGDPYHCQCQKTSRLLQQA
                     LGWEDGIIDTSFQSVFGPEEWLRPYTVEHVAELARSGVSDIAVISPAFASDCIETLEE
                     INGEIRESFEHAGGKDFAYIPCLNDDPAHIEVMMGVIRDNIGGWV"
BASE COUNT          199 a          347 c          334 g          188 t
ORIGIN      
        1 atccctgcgg gggccgggcc aggccgcaag ccaggccaca agccaggatg gccgccgcgc
       61 cggctctgcc cggctctggc ccggggcgcc gcgcgacggc ctagacccag cccccgatat
      121 tgtcgcggat cacgcccatc atcacctcga tatgggccgg atcgtcgttc aggcagggaa
      181 tataggcaaa gtccttgccg cccgcatgtt cgaaactttc gcggatctcg ccattgatct
      241 cttccagcgt ctcgatgcaa tccgaggcga aggcgggcga gatgacggca atgtcgctga
      301 ccccggaccg cgccagttcg gcgacatgtt cgacggtata gggacgcaac cattcctcgg
      361 gaccgaagac ggactggaaa ctggtatcga tgatcccatc ctcccagccg agggcctgtt
      421 gcagcaggcg cgaggtcttc tggcactggc aatgataggg atcgccttcc agaagatagc
      481 gtttcggcat cccgtgatag gacgcgacca gcctgcccgg cttgcggtcg cccagcgtat
      541 ggcggaccga ggcggccagc gcctgaacat agtcgggccg gtcgaaatag ggatcgcagg
      601 tgcgcaccga gggctgccat ttctgcgcca tcaacgcgcg gaaaagctgg tcattcgcag
      661 tggccgaggt cgcgcccgca taatgcggat agagcggcag gaacacgatc cggcggcagc
      721 ccgccttgac catccggtcc agcacctcct gcgtcgaggg attgccatag cgcatgcaga
      781 aatcgaccat cacccgatcg ccccattcct cggcggcgcg cgcggccagg gccgccgtct
      841 gatcgcgggt gattgtcatc agcgggcttt cgttccgctc ctcgttccag atcagcttgt
      901 aattcttccc cgaggtgaag ggccgtctgg tcaggatgat gccctgcaac aacggctgcc
      961 atttccacgc cggatagtcg atcacccgcc tgtccgacag gaattcgttc agatagcggc
     1021 gcatggacca gtaatcatgg ccgtcgggcg tgcccagatt ggcgatca
//
LOCUS       DTVW01000162            3899 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1225457, whole
            genome shotgun sequence.
ACCESSION   DTVW01000162 DTVW01000000
VERSION     DTVW01000162.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3899)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3899)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3899
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1225457"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..273
                     /locus_tag="EYO87_02145"
     CDS             <1..273
                     /locus_tag="EYO87_02145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3168 domain-containing protein"
                     /protein_id="HIC64803.1"
                     /translation="EEVRDAGDFDRAGSQHDFIVSVLSGTDESAGFAAVKTAAVAVAE
                     ALERAELTLDRGDLAGMWFLRAKARRVENGAARRVDLTFRARIDLD"
     gene            285..698
                     /locus_tag="EYO87_02150"
     CDS             285..698
                     /locus_tag="EYO87_02150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010394113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage major tail protein, TP901-1 family"
                     /protein_id="HIC64804.1"
                     /translation="MAVQNGRDLLIKMDMTGDGSFETVAGLRASRLSFNAETVDVTTI
                     ESEGGWRELLGGAGMRSASISGSGVFRDADTDGRARQIFFDGEVPRFQVVIPDFGTVE
                     GPFQISALEYAGSYNGEATYEMTMASAGALSFVAL"
     gene            698..1012
                     /locus_tag="EYO87_02155"
     CDS             698..1012
                     /locus_tag="EYO87_02155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gene transfer agent family protein"
                     /protein_id="HIC64805.1"
                     /translation="MVNPMRGEVEVVLDGRAHVARLTLGALAELEHQLGAASLMDLAG
                     RFEAGRFSSRDVLAVLVAGLRGGGWQGRAEDLLSVEIDGGPVGAGRAAAELLARAFRI
                     AA"
     gene            1009..1230
                     /locus_tag="EYO87_02160"
     CDS             1009..1230
                     /locus_tag="EYO87_02160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015500374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail assembly chaperone"
                     /protein_id="HIC64806.1"
                     /translation="MSEADKGLDWPGLMRAGLHGLGLRPDQFWTLTPAELALMLGIEA
                     GRPAMTRGRLAELAARYPDRDAAPDDGNA"
     gene            1245..1901
                     /locus_tag="EYO87_02165"
     CDS             1245..1901
                     /locus_tag="EYO87_02165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HIC64807.1"
                     /translation="MANKDGFGSGLDQLDENMGQTSRMTAEFEAELARLRQSMSFTSR
                     EVGTLSSGIESGLRRAFDGLIFDGDKLSEALKGIGRTIADTVFSIAMKPVESALAGSV
                     ANGMAGMVSGAMPFAQGGAFVQGRVMPFAKGGVVSEPTRFPMRGATGLMGEAGPEAIM
                     PLRRGADGRLGVAAGGSGGRAVNVTVNVTTPDVAGFKRSQSQIAAQLGRALARGERNS
                     "
     gene            1915..2547
                     /locus_tag="EYO87_02170"
     CDS             1915..2547
                     /locus_tag="EYO87_02170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02217 family protein"
                     /protein_id="HIC64808.1"
                     /translation="MAFHEVRFPASLSFGSIGGPERRTEIVALSSGFEERNTPWADAR
                     RRYDAGMGLRSLDDLSALVAFFEARAGQLHGFRWKDWSDYKSCLPSRDPAFDDQEIAV
                     GDGVSVTFQLTKAYASGPARYQRPINKPVKDSVRAGVGGSELFPDTHFTVDHQTGQIT
                     FSAAPEPGATISAGYEFDVPVRFDTDRIAVSVSSFQAGEMPQIPVVEVRV"
     gene            2544..3374
                     /locus_tag="EYO87_02175"
     CDS             2544..3374
                     /locus_tag="EYO87_02175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011749163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2163 domain-containing protein"
                     /protein_id="HIC64809.1"
                     /translation="MTSTTIARAWLIRRRDGLRVGFTDHDRDLSFDGLRFRPDHGMTA
                     RALVQASGLSVDNSEAEGALSDEAITEGDILAGRWDEAGLSMWEVDWRDVSKRRLVFA
                     GSLGEVSRSGGAFRAELRGLAEPLNQARGRVFHPRCSARLGDKFCKIDLTDDTLWTER
                     AIEALDDDHILRFAAFPAFDAGWFERGRIEVLTGRAEGLSAAIKNDLALPGARREIGL
                     WKAFGMTPAVGDRVRLVAGCDKRAQTCRLKFRNFVNFRGFPHLPTEDWLIAPGTAGRS
                     "
     gene            3371..3799
                     /locus_tag="EYO87_02180"
     CDS             3371..3799
                     /locus_tag="EYO87_02180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011047973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase"
                     /protein_id="HIC64810.1"
                     /translation="MTDRAVSVARDWLGTPYIHQASQKGVASDCLGLIRGIWRELYGE
                     EPEAAPDYTPDWGEFGSHELLMDGAMRHMLAVERAAALAPGQVLLFRMRAGAVAKHLG
                     IVSAAGDAPRFIHAYTHHGVIDSPLTAPWRNRIAARFRFP"
BASE COUNT          652 a         1099 c         1421 g          727 t
ORIGIN      
        1 gaagaggtgc gcgatgccgg cgatttcgat cgcgccggat cccagcacga tttcatcgtc
       61 tcggttctgt cgggcacgga tgaaagcgcg ggattcgccg ccgtgaaaac ggctgccgtt
      121 gctgtcgcgg aggctttgga acgtgccgaa ctgacgctgg atcgcggcga tctggccgga
      181 atgtggttcc tgcgcgccaa ggcgcggcgg gtggaaaatg gtgcggcgcg gcgggtcgat
      241 ctgaccttcc gtgcccgcat cgatctggac tgaggagaaa acccatggcg gtacagaacg
      301 gacgcgacct gctgatcaag atggacatga cgggcgatgg ctctttcgag acggtggccg
      361 gactgcgggc ctcgcgcctg tcgttcaacg ccgagacggt ggatgtgacc acgatcgaaa
      421 gcgaaggcgg ctggcgcgaa ttgctgggtg gggcgggaat gcgcagcgcc tcgatctcgg
      481 ggtcgggagt gtttcgcgat gccgatacgg acggtcgtgc gcggcagatc tttttcgacg
      541 gcgaggttcc gcgctttcag gtcgtcatcc cggatttcgg cacggtcgag gggcctttcc
      601 agatctccgc gttggaatac gcgggtagct acaacgggga ggcgacctac gagatgacga
      661 tggcgtcggc gggcgcgctg agcttcgtgg ccctgtgatg gtgaacccga tgcggggcga
      721 ggtcgaggtg gttctggacg gccgcgcgca tgtcgcacgg ctgaccctgg gagccttggc
      781 agagctggaa catcagttgg gcgcggcctc gttgatggat cttgccgggc ggttcgaggc
      841 cgggcgcttc agcagccgcg atgtgttggc cgtgcttgtc gccggcctgc gcggcggagg
      901 ttggcagggt cgcgccgaag acctgctgtc ggtcgagatc gatggcggcc cggtgggggc
      961 cggccgcgcg gcggcagaat tgctggcgcg ggcttttcgg atcgcggcat gagcgaggcc
     1021 gacaagggac tggattggcc gggactgatg cgcgccggcc tgcatgggct gggcctgaga
     1081 ccggaccagt tctggacgct gaccccggcg gagctggcgc tgatgctggg catcgaagca
     1141 ggccgccctg caatgacgcg gggcagactg gccgaactgg cggcgcgata tcccgaccgg
     1201 gacgcggcgc ctgatgacgg gaatgcatga tcggggatca gaggatggcg aacaaggatg
     1261 gtttcgggtc cggtctggac cagcttgacg agaatatggg acagacgagc cggatgacgg
     1321 ccgagttcga ggcggaattg gcgcggctgc gtcagtcgat gtcgttcacg tcgcgcgagg
     1381 tcggaacgct gagttccggg atcgaaagcg gattgcgccg cgccttcgac gggttgatct
     1441 ttgacggcga caagttgtcc gaggcactga aggggatcgg gcggacgatc gcagataccg
     1501 tcttctcgat cgcgatgaag ccggtcgaga gcgcattggc cggatcggtg gcgaacggca
     1561 tggccggaat ggtatcgggc gcaatgccat tcgcccaggg cggtgcattc gtgcagggca
     1621 gggtgatgcc cttcgccaag ggcggggtcg tctcggaacc gacccggttc ccgatgcgtg
     1681 gcgcgacggg actgatgggc gaagccggcc ccgaggcgat catgccgctg cgacgcggtg
     1741 ccgatggcag actgggtgtc gccgcaggcg gaagcggcgg cagggcagtg aacgtcacgg
     1801 tcaatgtcac gacgccggat gtcgccggct tcaagcgcag ccaatcgcag atcgcggcac
     1861 agcttggccg cgccctggcg cgcggcgaac gaaattcctg agcaggaggc gaggatggca
     1921 tttcacgagg tgaggtttcc tgcaagcctg tccttcggct cgatcggtgg accagagcgc
     1981 aggacggaaa tcgtcgcgtt gtccagcgga tttgaggaac gcaatacacc ttgggccgac
     2041 gcgcgcaggc gctatgatgc cggaatgggt ttgcgttcgc tggacgatct gtcggcgctg
     2101 gtcgcgttct tcgaggcgag ggcggggcaa ttgcacggct tccgctggaa ggattggtcg
     2161 gactacaaaa gctgtctgcc gtcacgcgat ccggccttcg acgatcagga aatcgccgtg
     2221 ggtgacggcg tcagcgtgac ctttcaactg accaaggcct atgcatcagg gccggcccgc
     2281 tatcagcgtc ccatcaacaa gccggtgaaa gacagcgtcc gcgccggtgt ggggggaagt
     2341 gaactgtttc cggacacgca tttcacagta gatcatcaga cgggccagat caccttcagc
     2401 gccgcacccg aacccggcgc gacgatctcg gcgggatatg aattcgacgt ccctgtccgg
     2461 tttgataccg atcggatcgc ggtatcggtt tcttcctttc aggcgggcga gatgccgcag
     2521 attccggtcg tggaggttcg cgtatgacca gcaccaccat cgcgcgtgcg tggttgatcc
     2581 gacgccgaga cggcctgcga gtgggcttta ccgatcacga ccgcgatttg tcattcgatg
     2641 gcctgcgctt tcgtcccgac catggaatga ctgcacgcgc tttggttcag gcttcgggac
     2701 tgtcggtgga caattccgaa gcagaaggag ccctgtcgga tgaggcgatc accgaagggg
     2761 acattctggc cggacgctgg gatgaagccg gtctcagcat gtgggaggtc gattggcgcg
     2821 atgtctcgaa gcgacggctg gtctttgccg gcagtctggg cgaggtgtcg cgttcgggcg
     2881 gggccttccg cgccgagttg cgcggcttgg cagagccgct gaaccaggcg cggggccgtg
     2941 tgtttcatcc gcgctgctcc gcccggctgg gagacaagtt ctgcaagatc gacctgactg
     3001 acgatacctt gtggaccgag cgcgcgatcg aggcgctaga cgacgaccac atccttcgtt
     3061 tcgcggcgtt tccggcattt gacgcgggat ggttcgagcg cggcaggatc gaggttctca
     3121 cggggcgggc ggaagggctt tcggctgcga tcaagaacga tctggcactg cccggagcgc
     3181 gtcgcgagat cgggttgtgg aaggcattcg gaatgacccc tgccgtcggg gatcgcgttc
     3241 ggctggtcgc cgggtgtgac aaacgcgccc agacctgccg actgaagttc cgcaattttg
     3301 tcaatttccg tggttttccg catctgccga ccgaggactg gctgattgcg cccgggacgg
     3361 cagggcggtc atgaccgata gagccgtttc cgtcgcacgc gactggctgg gaacacccta
     3421 tatccatcag gccagccaga agggcgtcgc gtcggactgc cttggcctga tccgcggcat
     3481 ctggcgtgaa ctctacggcg aagagccaga ggccgcaccc gattatacgc ccgactgggg
     3541 cgagttcggc agccatgaac tgctgatgga tggtgccatg aggcacatgc tggcggttga
     3601 acgggcagcg gcgctggcgc caggtcaggt gctgctgttc cgcatgcggg cgggcgctgt
     3661 cgccaaacat ctaggcatcg tctcggctgc cggcgacgcg ccgcgattta ttcatgccta
     3721 tacccatcat ggggtgatcg acagtccgtt gaccgcccct tggcgaaacc ggatcgcagc
     3781 ccggttccgc tttccctgat ctttgactta aggaggccgc gatggccacg attgtgctgt
     3841 ccgcagtggg tgcatccatc ggcggcgggt tcggcggcgc gtttctgggc atgtcgggc
//
LOCUS       DTVW01000163            3030 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1226200, whole
            genome shotgun sequence.
ACCESSION   DTVW01000163 DTVW01000000
VERSION     DTVW01000163.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3030)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3030)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3030
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1226200"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..157
                     /locus_tag="EYO87_02185"
     CDS             <1..157
                     /locus_tag="EYO87_02185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HIC64811.1"
                     /translation="AVTLPGIGKVACRARPERQVRNPQTQEMMTKPADKQVKVTVAKA
                     LKDSVNS"
     gene            315..1370
                     /locus_tag="EYO87_02190"
     CDS             315..1370
                     /locus_tag="EYO87_02190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018899584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III polyketide synthase"
                     /protein_id="HIC64812.1"
                     /translation="MPAILAAPVRLLAIASAVPPHLLPQHKVIDAARAILGPRFAQFE
                     RLIPAFRNGGIEERRSVVPLDWFTTPRGWRDRTEAYLSGASDLFRQAAGRALEMAGLT
                     APEVDVIVTISSTGIATPTLEAQVAREMGFRADAIRVPVFGLGCAGGASGLGIARDLA
                     AARPGANVMLVAVETCTLLFRLDRLRKADIIATALFGDGAAALVLRAGEARDDGRPEI
                     GTGRQHMWPDTLDIMGWSVEENGLGVIFDRSIPDFATRELRPALDALIPGHAPQRYVC
                     HPGGAKVLVALEQALDLPEGALDAERAVLARTGNMSAPTVLFVLEQVLASDQRGDLLV
                     LALGPGFTLSAVPILVP"
     gene            1367..1888
                     /locus_tag="EYO87_02195"
     CDS             1367..1888
                     /locus_tag="EYO87_02195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009798935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64813.1"
                     /translation="MTGAAAFIAFLVLQRLAELILARRNTVRLLAQGAVEHGAAHYPL
                     IVALHASWLASIAIFGWDQPIRPLWLILFVALQAARLWVLASLGDRWTTRIIVLDRPL
                     VARGPYRLIPHPNYAVVVAEIAVAPVVLGLWPVALIFTALNAAVLAIRIRAENRALSG
                     LRDRRPDRRTPPG"
     gene            complement(1914..>3030)
                     /locus_tag="EYO87_02200"
     CDS             complement(1914..>3030)
                     /locus_tag="EYO87_02200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008597231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="alkaline phosphatase"
                     /protein_id="HIC64814.1"
                     /translation="PIWGIDDEGMRSYATMALHEPDFFIHSGDTIYADGPMQDEVAIE
                     GGLWRNRILTDEVRKVAESLDEYRGRWKYNLMDQHVRALSAICPTLFQWDDHEVVNNW
                     SPGKDLSADDRYSEKSVPLLMARAQRAFHEMTPISYNPAEPGRVYRKIGYGPLLDIFF
                     LDLRSYRGANSDGMQDAVTAQSQILGKAQMDWLKGALKGSKATWKVIACDMPIGVNVW
                     DKVAEDQRYVEAVANGDPGAAKGRELEFAQLLRFIRDEKVANTVWLTADVHYTAAHEY
                     HPDRAAFRDFEPFWEFVSGPLHAGTFGPNDLDMTFGPEVKFVKAPPAGQANLPPSAGM
                     QFFGIVDIEAASGQMRVRLMDRGDRELWSITLDPKPA"
BASE COUNT          441 a         1059 c         1010 g          520 t
ORIGIN      
        1 cgcggtgacg ctgcccggca tcggcaaggt cgcctgccgc gcccgtcccg aacgtcaggt
       61 ccgcaacccg cagacccagg aaatgatgac caaacccgcc gacaagcagg tcaaggtgac
      121 agtcgccaag gccctgaagg acagcgtcaa cagctgatcc ggccgaattt cggtgatgac
      181 gggccgcgcc gccgggcgcg gccctcttgg ttgcgccgcg cgcgcgccgt gccgttttcg
      241 ccgcgtcgcg gcgatccctg tgcacccttt ttcccgcggg atgcgttact gggacggaac
      301 agacgggaat cctcatgcca gccatcctcg cggcgccggt gcgtctgctg gccattgcca
      361 gcgccgtgcc gccccacctg ctgccacagc acaaagtcat cgacgcggcc cgcgcgatcc
      421 tcggcccccg ttttgcgcag ttcgaacgcc tgatcccggc ctttcgcaac ggcgggatcg
      481 aggaacgccg gtcggtcgtg ccgctggact ggttcaccac gccacgcggc tggcgggacc
      541 ggaccgaggc ctatctgtcc ggcgcctcgg acctgttccg gcaggcggcc ggccgggcgc
      601 tggagatggc gggcctgacg gcgccagagg tcgatgtgat cgtcaccatt tcctcgaccg
      661 ggatcgccac gccgacgctg gaggcgcagg tggcgcgcga aatggggttt cgcgccgacg
      721 cgatccgggt gccggtcttc ggtctgggat gcgcgggcgg cgcctcggga ctgggcatcg
      781 cgcgcgatct ggcggcggcc cggcccggcg ccaatgtcat gctggtcgcg gtcgagacct
      841 gcacgctgct gttccgtctg gaccggctgc gcaaggccga catcatcgcc accgccctgt
      901 tcggggatgg cgcggcggca ctggtgctgc gcgcgggcga agcgcgggac gacggccggc
      961 ccgagatcgg caccggccgc cagcatatgt ggcccgacac gctggacatc atgggctggt
     1021 cggtcgagga gaacgggctg ggcgtgatct tcgaccgctc gatccccgat ttcgcgacgc
     1081 gcgaattgcg gcccgcgctg gatgcgctga ttcccggtca cgcgccccaa cgctatgtct
     1141 gccatccggg cggagccaag gtgctggtgg cgctggaaca ggcgctggat ctgcccgaag
     1201 gcgcgctgga cgccgaacgg gccgtgctgg cccgcaccgg caacatgtcc gcgccgacgg
     1261 tgctgttcgt gctggagcag gtgctggcat cggaccagcg cggcgacctg ctggtgctgg
     1321 cgcttggacc cggcttcacg ctgtcggccg tgccgatcct cgtgccatga caggcgcggc
     1381 cgccttcatc gccttcctgg tcctgcaaag actggccgag ctgatcctgg cgcggcgcaa
     1441 cacggtgcgg ctgctggcgc aaggcgcggt cgaacacggc gcggcgcatt atccgctgat
     1501 cgtggcgctt cacgcaagct ggctggcctc catcgcgatt ttcggctggg accagccgat
     1561 ccgtccgctg tggctgatcc tgttcgtggc gcttcaggcg gcccggctct gggtgctggc
     1621 ctcgctgggc gaccgctgga cgacgcggat catcgtgctg gatcggccgc tggtcgcgcg
     1681 cgggccctac cggctgatcc cgcatccgaa ctacgccgtc gtcgtggccg agatcgcggt
     1741 cgcgccggtg gtgctgggcc tgtggcccgt cgcgctgatc ttcaccgcgc tgaatgcggc
     1801 cgtcctggcc atccgcatcc gggccgagaa ccgcgccctg tccggcctgc gcgaccgccg
     1861 gccggaccgc aggaccccgc ccggctgaga cgggcgcggc ccgcggccgg gattcaggcc
     1921 ggtttcggat ccagcgtgat cgaccacaat tcccgatcgc cgcgatccat cagccgcacc
     1981 cgcatctggc ccgaggcagc ctcgatatcg acgataccga agaactgcat ccccgccgag
     2041 ggcggcaggt tcgcctggcc cgccggcggc gccttgacga atttcacctc gggcccgaag
     2101 gtcatgtcca gatcgttcgg cccgaaggtg cccgcgtgaa gcggtccgga cacgaattcc
     2161 cagaacggct cgaaatcccg aaaggcggcg cggtcgggat ggtattcatg cgcggcggtg
     2221 tagtgcacat ccgccgtcag ccagaccgtg ttcgcgacct tctcgtcgcg gataaatcgc
     2281 agaagctgcg cgaattccag ctctcgtccc ttcgccgcgc cgggatcgcc attcgccacg
     2341 gcctcgacat agcgctgatc ctcggcgacc ttgtcccaga cattgacgcc gatgggcatg
     2401 tcgcaggcga tcaccttcca ggtggccttc gagcctttca gcgccccctt cagccaatcc
     2461 atctgcgcct tgccgaggat ctgggactgc gccgtcaccg cgtcctgcat tccatcgctg
     2521 ttcgcgccgc gatagctgcg cagatccaga aagaagatgt ccagcagcgg accatagccg
     2581 atcttgcgat agacgcgacc tggttcggcc gggttgtagc tgatcggggt catctcgtga
     2641 aaggcccgct gcgcgcgcgc catcagcagc ggcaccgact tttcgctgta gcggtcatcc
     2701 gcgctcagat ccttgccggg cgaccagttg ttgaccacct cgtgatcgtc ccactggaac
     2761 agcgtcgggc aaatcgccga cagggcccgc acatgctggt ccatcaggtt gtatttccag
     2821 cgcccccgat attcgtcgag actttcggcg accttgcgga cctcgtcggt caggatgcgg
     2881 ttcctccaca gaccgccctc gatcgcgacc tcgtcctgca tcggtccgtc ggcatagatc
     2941 gtgtcgccgg aatggatgaa gaaatccggc tcgtgcagcg ccatcgtggc atagctgcgc
     3001 attccctcgt cgtcgatgcc ccagatcgga
//
LOCUS       DTVW01000164            1252 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1228583, whole
            genome shotgun sequence.
ACCESSION   DTVW01000164 DTVW01000000
VERSION     DTVW01000164.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1252)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1252)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1252
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1228583"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..512)
                     /locus_tag="EYO87_02205"
     CDS             complement(<1..512)
                     /locus_tag="EYO87_02205"
                     /inference="COORDINATES: protein motif:HMM:PF00501.26"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long-chain fatty acid--CoA ligase"
                     /protein_id="HIC64815.1"
                     /translation="MPMTFLQALRLNARRFPTKPSVVFEGRSQTYTDFLDRVERMMTV
                     LARRGIGPGDKVAVISENHPDFLAAYVAVTGLGAIPAPINYRIAPEVMADVVARSDSK
                     TLLLGDAALDHADLFRTVVDDIVTIGDGAPQGLPRLSDLLADTPPDPPQGQDGTTIML
                     HTSGTTGKPKG"
     gene            complement(523..>1252)
                     /locus_tag="EYO87_02210"
     CDS             complement(523..>1252)
                     /locus_tag="EYO87_02210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009504608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
                     /protein_id="HIC64816.1"
                     /translation="EDKGDHWLINGGKLWTTNGVNGRVGILVARTFTEGCDGDLSLFI
                     VDLEETDFEASRVGTMFIKATATSQLAFQDAKVPKENLLGPAGKGLKAILTGLNYGRL
                     NVAAGAVGAAQRSLDLSTDYVKTRKQFGNVIGSYQLVQKLIVDMTIRTEAARALTDRA
                     AQALDAGLPGRKECSIAKLYASEAAHEVASMALQAHGGLGYSTDYPVERLFRDTRGGL
                     IPEGTSEIQTLIIGREVLGISAFT"
BASE COUNT          210 a          429 c          373 g          240 t
ORIGIN      
        1 cccttgggct tgccggtggt ccccgacgtg tgcagcatga tcgtggtgcc gtcctgccct
       61 tgcggcggat cgggcggtgt gtctgccaga aggtccgaca ggcgcggcag tccttgcggg
      121 gccccgtcgc cgatggtgac gatgtcgtcc accacggtcc ggaacagatc ggcatgatcc
      181 agcgccgcat cgcccagcag cagggttttg ctgtccgagc gggcaaccac atcggccatg
      241 acttcgggcg cgatgcgata gttgatcggt gcgggaattg cgcctagccc cgtcaccgcc
      301 acataggcgg caaggaaatc gggatgattt tccgagatca ccgccacctt gtcgcccggt
      361 ccgatgccgc gccgcgccag caccgtcatc atccgttcca cccggtcaag gaaatccgta
      421 taggtctggc tcctcccctc gaacaccacc gagggtttcg tggggaaccg ccgcgcgttc
      481 aacctcaggg cctggagaaa ggtcatcggc atggccgcct cctcaggtga aggccgagat
      541 cccgagaacc tcgcgcccta tgatcaatgt ctggatttcc gatgtgcctt cggggatcag
      601 cccgccgcgc gtgtcgcgga acaaccgttc gacggggtag tcggtcgaat agcccagccc
      661 gccgtgcgcc tgcagcgcca tcgaggccac ctcatgcgcc gcctcgctgg catagagctt
      721 ggcaatcgag cattccttgc gcccaggcag acccgcgtcc agcgcttggg cggcacggtc
      781 agtcaacgcg cgcgccgctt cggtgcggat ggtcatgtcg acgatcagct tctgcaccag
      841 ctgatagctt ccgatcacgt tgccgaactg cttgcgcgtc ttgacgtaat cggtggacag
      901 gtccaacgac cgctgcgccg cgcccaccgc gcccgccgcc acgttgagcc ggccataatt
      961 caaccccgta aggatcgcct tgaggccctt tcccgcagga cccaacaggt tttcctttgg
     1021 cacctttgcg tcttgaaagg ccagctgcga tgtcgcggtg gccttgatga acatcgtgcc
     1081 cacccgcgaa gcttcgaaat cggtctcctc gaggtccacg atgaacagac tcagatcgcc
     1141 atcacagcct tccgtgaatg tccgtgccac caggattccg acccggccgt tgacgccgtt
     1201 cgtcgtccac agcttgccgc cattgatcag ccagtggtcg cccttgtcct cg
//
LOCUS       DTVW01000165            3030 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1228645, whole
            genome shotgun sequence.
ACCESSION   DTVW01000165 DTVW01000000
VERSION     DTVW01000165.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3030)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3030)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3030
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1228645"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            125..250
                     /locus_tag="EYO87_02215"
     CDS             125..250
                     /locus_tag="EYO87_02215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012177066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L36"
                     /protein_id="HIC64817.1"
                     /translation="MKVRNSLRSLKSRHRDCQVVRRKGRVYVINKTNRRFKARQG"
     gene            398..901
                     /locus_tag="EYO87_02220"
     CDS             398..901
                     /locus_tag="EYO87_02220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005980251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1643 domain-containing protein"
                     /protein_id="HIC64818.1"
                     /translation="MIERSFSDRDTHSRALFSECGAYRYALTRRWGRGRRLTLVLLNP
                     STADERRNDPTVARCEVRARALGFGAFRVTNLFAFRATDPRDLKRALDPVGPDNDAIL
                     ERSADWADTVLCGWGLHGAHLGRGPAVEARLRQRARDLCHLGLTGTGAPRHPLYVAYR
                     VMPVPWR"
     gene            1152..2078
                     /locus_tag="EYO87_02225"
     CDS             1152..2078
                     /locus_tag="EYO87_02225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011749036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="calcium-binding protein"
                     /protein_id="HIC64819.1"
                     /translation="MPDEGDSAGSETDGFISDVSSLPADLAPEAGADPAVSAGTGAVA
                     GDPGDPGTAEETPEQILAAIIGTDRADALMGGDGADSIDGLGGSDDLRGGLGDDTIRG
                     GSGQDWIQGDAAYGPGGNDEIHGGSGDDSLAGQGGDDLIWGDEGDDTILGGAGSDSLF
                     GGAGNDWMSGNDGDDVLVSGGGSDDLDGGAGNDLLIGGDDDETAWIHGGDGEDTLVPG
                     AGDFAEGNAGADQFVLKPVDGDLPTIADFDGTEDRIILHLPEDMTQGAQIQLVQHDDG
                     TTLINVNGDAVARMLQLGGLRVEDIGIVPIRA"
     gene            2229..2498
                     /gene="rpsO"
                     /locus_tag="EYO87_02230"
     CDS             2229..2498
                     /gene="rpsO"
                     /locus_tag="EYO87_02230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019295116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HIC64820.1"
                     /translation="MSITVEEKAKVIKEFGTKADDTGSPEVQVAILTSRISTLTEHFK
                     THKKDNHSRRGLLKLVAQRRKLLDYLKGKDESRYADLIKRLGIRR"
     gene            complement(2600..>3030)
                     /locus_tag="EYO87_02235"
     CDS             complement(2600..>3030)
                     /locus_tag="EYO87_02235"
                     /inference="COORDINATES: protein motif:HMM:PF04577.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF563 domain-containing protein"
                     /protein_id="HIC64821.1"
                     /translation="HPQQHSITEQFATFRAARQIIGPDGSAFHLAGFVTDPGQSFTII
                     KRRSAPDHANIVDQLVAMGAKVQVVDAIRANWIRPGKRKADDRSWAELDFADLFARLS
                     ALGLLSAPVDASDLELPPIAQEVERIGHANKGRMTRLATG"
BASE COUNT          509 a          972 c         1017 g          532 t
ORIGIN      
        1 acatcgtagt ggccactggt tcgatcccag taccgcccac cattttttcg ccgcccccgg
       61 ccgcaaccgg gggcatttcg ttttccaggg aggctcagca gcgccgcgac gatggagaag
      121 accgatgaag gttcgcaact cgctccgctc gctcaagagc cggcaccgcg actgccaggt
      181 cgtgcgccgc aagggccgcg tctacgtgat caacaagacc aaccgccgtt tcaaggctcg
      241 tcagggctga accggcgccc ttgatccggg cgtcccggca gatcgccacg gaatcgaaat
      301 cacccgcccc cggcgggttt tttcttggca agccgcccga catcgcctgc cggctccggt
      361 gcgcgcgggc tgggggcgca gtcacgaggg ggcatccgtg atcgaacggt ccttcagtga
      421 ccgggacacg cattcccggg cgctgttttc ggaatgcggc gcctatcgct atgcgctgac
      481 gcgccggtgg ggcaggggca ggcggctgac cctggtgctg ctgaacccct cgaccgccga
      541 cgaacgccgc aatgatccca ccgtcgcccg ctgcgaggtt cgtgcccgcg cgcttggctt
      601 cggggcattt cgcgtgacca acctgttcgc cttccgcgcg accgatcccc gcgacctgaa
      661 acgtgccctc gatcctgtcg gtccggacaa tgacgcgatc ctcgaacgat ccgccgactg
      721 ggccgatacg gtgctgtgcg gctggggtct gcacggcgcg catctggggc gcggacccgc
      781 ggtcgaggca cgcctgcggc aacgggcgcg cgatctgtgc catctgggcc tgaccggcac
      841 gggcgcgccg cggcatccgc tctatgtcgc ctatcgcgtc atgccggtgc cgtggcgtta
      901 acgtattctt aagaaaacga ttccctgacg cgtgatctgg gctacacttc atgcgtgtgt
      961 ccgccttgcg cggtttttcg aggtgtcggc cgatgcttat gcttgcaggt ttgatggggc
     1021 ttctggtcgc cgggatgagc atcgacttgt ctccgcttgg gcagacgcag gcggatgaca
     1081 tgcccgaaga cgatctgccc gaagacgagg cggcgggcga ttccctgccg ccgatcatgc
     1141 cacagcccga catgccggac gagggcgaca gtgccggttc cgaaaccgat ggcttcattt
     1201 ccgatgtcag cagcctgccg gccgatcttg cgcccgaggc tggcgcagat cccgccgttt
     1261 cggccggcac cggcgcggtt gccggcgatc cgggcgatcc gggcacggcc gaagagacgc
     1321 cggaacagat cctggccgcg atcatcggga ccgacagggc cgatgcgctg atgggcggcg
     1381 acggtgccga cagcatcgac ggcctgggcg gcagcgacga tttgcggggc ggcctgggcg
     1441 acgacacgat caggggcggg tcgggccagg actggattca gggtgacgcc gcctatggcc
     1501 ccggtggcaa cgacgagatc cacggcggct ccggcgacga ttcgctggcc gggcagggcg
     1561 gcgacgacct gatctggggc gacgagggcg acgacaccat cctgggtggt gcgggcagcg
     1621 acagcctgtt cggaggcgcc ggcaatgact ggatgtcggg aaatgacggc gacgacgttc
     1681 tggtctcggg cggcggttcg gacgatctgg atggtggcgc cggcaacgat cttctgatcg
     1741 gtggcgacga cgatgaaacc gcctggattc acggcggtga cggcgaagac acgctggtgc
     1801 cgggggccgg cgatttcgcc gagggaaatg ccggcgccga ccagttcgtg ctgaagccgg
     1861 tggacggcga tctgccgacc atcgccgatt tcgacgggac cgaggatcgt atcatcttgc
     1921 atctgcccga ggacatgacc caaggcgccc agatccagtt ggtgcaacac gacgacggca
     1981 cgaccctgat caatgtcaac ggcgacgccg tcgcccggat gttgcagctt ggcggcctgc
     2041 gggtcgagga tatcggcatc gtccccattc gggcctgacg cggacacggt ttccgctttc
     2101 caagggcgcg attctctttt atacgcgcgc cttcgctggc gcttcgtcgc tggcggacct
     2161 ccacgggcct gtgctggacg acatcccggc ctgcgccatg aacccgaact tttgagaagg
     2221 agaccccgat gtcgatcact gtcgaggaaa aagccaaggt catcaaggaa tttggcacca
     2281 aggccgacga taccggatcg cccgaggtgc aggtcgcgat cctgacctcg cgcatttcca
     2341 ccctgaccga gcatttcaag acgcacaaga aggacaacca ctcgcgtcgt ggccttctga
     2401 agctggtcgc gcagcgccgc aagctgctgg actatctgaa gggcaaggac gaatcgcgct
     2461 atgccgatct gatcaagcgt ctgggtatcc gccgctgagc ctgtcgcctt gcggcgaagt
     2521 tccgaacgcc cgtcgcgaaa gcggcgggcg tcttggttcg cgcttgcccg atcgccaacg
     2581 ggcgaagggt ttccagcgtt cagccggtcg ccagccgcgt catccggccc ttgttggcgt
     2641 ggccgatccg ttcgacttcc tgcgcgatgg gcggaagctc cagatcggac gcgtccacgg
     2701 gggccgacag caggcccaga gccgacaacc gggcaaagag atcggcgaaa tccagctctg
     2761 cccagcttct gtcgtcggcc tttcgctttc ccggtcggat ccagttcgcg cggatcgcat
     2821 ccaccacctg caccttcgca cccatcgcca caagctgatc gacgatgttg gcatgatcgg
     2881 gggcgctgcg gcgtttgatg atcgtgaaag attgcccggg atcggtcacg aaacctgcaa
     2941 gatgaaacgc ggacccgtcc ggcccgatga tctgtctggc ggcccggaac gttgcgaatt
     3001 gctcggtgat ggaatgctgc tggggatgat
//
LOCUS       DTVW01000166            1153 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1229383, whole
            genome shotgun sequence.
ACCESSION   DTVW01000166 DTVW01000000
VERSION     DTVW01000166.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1153)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1153)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1153
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1229383"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..200
                     /locus_tag="EYO87_02240"
     CDS             <1..200
                     /locus_tag="EYO87_02240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012430657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64822.1"
                     /translation="VATIGGAVAGAMAGNAVEGNTVVGQTYRVTMRLNDNSRITLTQN
                     NPNGLRVGDRARIENNMAVPY"
     gene            290..>1153
                     /locus_tag="EYO87_02245"
     CDS             290..>1153
                     /locus_tag="EYO87_02245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012430656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HIC64823.1"
                     /translation="MLNRLSIRFRLNAALTLLALLLAITGAIGVIGMRASDANINEIY
                     TNQLASTSLVGKAQLNAAIVRTTLDRAVFHPDAADVPAILDKANGYRTKSDDAWKQYK
                     TLPMNADESRLAADMETKRNAFFRDGIEPLMTALRARDAATVDKVVMNVIPPLSVALS
                     AAADALDRSQVEQAKAAYESAAARSHAFLMLIIGAIGVGIAAALGCAFGLHRAISVPL
                     SKMLGHFSAISNGNLTERITVGSKDEMGALTQGLIDMQRGLIRTIVTMRGGSESIASA
                     TKQIAAGNMDLS"
BASE COUNT          229 a          382 c          358 g          184 t
ORIGIN      
        1 ccgtggccac catcggcggc gcggtggcgg gtgccatggc gggcaatgcc gtggaaggca
       61 acacggtggt cggccagacc taccgcgtga ccatgcggct gaacgacaac tcgcgcatca
      121 cgctcaccca gaacaacccc aacggcctgc gcgtggggga tcgcgcccgc atcgaaaaca
      181 acatggctgt gccgtactag ccacttcctg catgggagcg cccgcgccgg cttcagaaac
      241 ggcgcgggcc gaccgatata gcggaggcaa taaccccgcg gtgattccca tgctcaatcg
      301 actttccatc cgtttccgtc tcaatgcagc gctgacgctg ctggctttgc tgctcgccat
      361 taccggcgcc attggcgtga tcggaatgcg cgcgtccgac gcgaacatca acgagatcta
      421 caccaatcag ctcgcttcga cctcgctggt cggcaaggcg cagctgaatg cggcgatcgt
      481 gcgcacgacg ctcgatcgcg cggtcttcca tccggatgcc gctgacgtgc cggccatcct
      541 ggacaaggca aacggctacc gcacgaagtc tgacgacgcc tggaagcaat acaagaccct
      601 gcccatgaac gcggacgaaa gccgtctggc cgccgacatg gagaccaagc gcaacgcatt
      661 cttccgtgac ggcatcgagc cgctgatgac cgcattgcgt gcccgcgatg ccgcgaccgt
      721 cgacaaggtg gtgatgaacg tgattccgcc gctgtccgtg gcgctgtctg cggcagccga
      781 tgcgctggat cgcagccagg tcgaacaggc caaggcagcc tacgaaagcg cagcggcccg
      841 atcgcacgcg ttcctgatgc tgatcatcgg cgccatcgga gtgggcattg cggcggcgct
      901 ggggtgcgca tttggcctgc accgggcaat ttcagtgccg ttgtcaaaga tgctgggcca
      961 cttcagcgcg atctcgaacg gcaacctgac cgagcgcatc actgtcggca gcaaggacga
     1021 aatgggcgcg ctcacgcaag gtctcatcga catgcagcgc ggcctgatcc gcaccatcgt
     1081 gacaatgcgc ggcggcagcg aatccatcgc cagcgccacc aagcagattg cggccggcaa
     1141 catggacctg tcg
//
LOCUS       DTVW01000167            2081 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1229898, whole
            genome shotgun sequence.
ACCESSION   DTVW01000167 DTVW01000000
VERSION     DTVW01000167.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2081)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2081)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2081
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1229898"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(242..493)
                     /locus_tag="EYO87_02250"
     CDS             complement(242..493)
                     /locus_tag="EYO87_02250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008031969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64824.1"
                     /translation="MTSNAACWRHPAPALVIATSLLTACAMGDSDPGGATCPPIIAYG
                     QAVRERTAAELEALPEDAALVGMMADYAVMRAQARVCAS"
     gene            complement(402..653)
                     /locus_tag="EYO87_02255"
     CDS             complement(402..653)
                     /locus_tag="EYO87_02255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008032506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64825.1"
                     /translation="MGVLTALLASRWARRLFVWAALIGAVLLFLLNLRRAGETAGRHA
                     ERLNQMERQNDIQRRMLEASSTRPRDRDELADRLRDGRF"
     gene            complement(653..1327)
                     /locus_tag="EYO87_02260"
     CDS             complement(653..1327)
                     /locus_tag="EYO87_02260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013654758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF882 domain-containing protein"
                     /protein_id="HIC64826.1"
                     /translation="MTTRFYRHWRDVPKDSWRWPNFSPAEIACRGTGSILIHEAALDR
                     LQALRTRLDKPLIVNSAYRSPEHNARVRGAKGSKHLEGTAFDVSMANHDPAAFETAAR
                     AEGFLGIGTYPRSGFMHIDLGPARRWGDPFPARPIPFAEDQPPARERLADSRTMKGSG
                     AAGIATAGVAGIEITQDTLSDAQSAIQPLIPYLDTLRWAFIALALAGIGLTVWARLDD
                     WNRGRR"
     gene            complement(1424..1711)
                     /locus_tag="EYO87_02265"
     CDS             complement(1424..1711)
                     /locus_tag="EYO87_02265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017365805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64827.1"
                     /translation="MTPKRLDDMLQMSESEFEELLARAAQEGARRALVDAGLDGREAA
                     LDIRDLRALLEGIRLMRRTAAQTIIRMLSAGLILTLLAGIALKLKLFGEGG"
     gene            complement(1708..2049)
                     /locus_tag="EYO87_02270"
     CDS             complement(1708..2049)
                     /locus_tag="EYO87_02270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018699918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64828.1"
                     /translation="MADYNDQGCFDAATNRFVAPVAGTYLFGASLLFKINANTSARMR
                     GRLVLNGATEIRGSFGEISSAHVSEATALWLQTMVPLDAGDTVALQGSFRAFDGYFAA
                     DHTTFWGAKIG"
BASE COUNT          366 a          664 c          724 g          327 t
ORIGIN      
        1 caggatgggg acccggaccc gaaagcgcgg ggaccgcagg agacgccgga ccgtgggccg
       61 gatcgagtgc ggggtgggga tggcggcgaa cccgttcgga gcccaccggg gtcggccagc
      121 atatcgccga ccaagtggat atcccgaagt tggatatccg agatgacagg tgggcgcgct
      181 ggtctttctg gacggacagg tggtccgcct tggagatagc gcgcccgaag gagccaagaa
      241 gtcaggatgc gcacacccgc gcctgcgccc gcatgacggc gtaatccgcc atcatcccga
      301 ccagagcggc atcctcgggc agcgcctcca gctcagccgc cgtccgttcc cgcacagcct
      361 gaccgtaagc gatgatcggc ggacaggtcg cgccgcccgg atcagaatcg cccatcgcgc
      421 aggcggtcag caagctcgtc gcgatcacga gggcgggtgc tggatgcctc cagcatgcgg
      481 cgttggatgt cattctggcg ctccatctgg ttcaggcgtt cggcgtggcg accggcggtt
      541 tcaccggccc gccgcaggtt gaggaggaaa agcaggaccg cgccgatcag cgcggcccag
      601 acgaacagcc gccgcgccca gcgcgacgcc agcagcgcgg tcaggacgcc catcaccgcc
      661 gcccccggtt ccagtcatcc agccgggccc agacggtcag gccgatcccg gccagcgcca
      721 gggcgatgaa ggcccagcgc agggtgtcga gataagggat cagcggctgg atcgccgatt
      781 gcgcgtcgct gagggtgtcc tgggtgattt cgatccccgc aacaccggcg gtggcgatcc
      841 cggccgcgcc gctgcccttc atggtgcggc tgtcggccag acgttcccgc gcgggcggct
      901 ggtcctcggc gaagggaatg gggcgggccg gaaacggatc gccccagcgc cgggcagggc
      961 caagatcgat atgcatgaag ccggaacggg gataggtgcc gatgcccaga aacccttcgg
     1021 cccgcgcggc tgtctcgaag gccgccggat cgtgattggc catggagaca tcgaaagccg
     1081 tgccttccag atgtttggaa cctttcgccc cacgcacccg ggcattgtgc tcagggctgc
     1141 gataggcgga attcacgatc agcggcttgt cgagacgcgt gcgcagcgcc tgcagtcggt
     1201 cgagggctgc ctcgtggatc agaatcgatc cggtgccgcg gcaggcgatt tcggccggcg
     1261 agaaattggg ccagcgccag ctgtctttcg ggacgtcgcg ccaatggcgg tagaaacggg
     1321 tggtcatgga tatcctccgg aaaagaaaaa ggcccaccgg aatggcgggc cgtggggtga
     1381 tgggtttggg atggatgatc gcgccgtgcg ccgcaccagc gcgtcagccg ccttcgccga
     1441 agagcttcaa cttcagggcg atcccggcca gcagcgtcag gatcagcccg gcgctcagca
     1501 tgcggatgat tgtctgggca gcggtgcggc gcatcaggcg gataccttcc aggagcgccc
     1561 gcaggtcacg gatatcgagg gcggcttccc tgccgtcgag acctgcgtct acgagggcac
     1621 gacgggcgcc ttcctgcgcg gcccgggcga gcaattcttc aaactcgctc tcgctcatct
     1681 gcagcatgtc gtcgagacgt ttgggtgtca tccgatcttc gctccccaga aggtggtgtg
     1741 gtcggccgcg aaatatccat cgaacgcgcg aaagctgccc tgcagcgcga ccgtgtcgcc
     1801 cgcatccagc ggcaccatgg tctgcagcca gagcgccgtg gcctcggaca catgtgcgct
     1861 ggaaatctcg ccgaacgacc cccggatttc cgtggcaccg ttcagcacca gccgaccacg
     1921 catccgggcg ctggtattgg cgttgatctt gaaaagcagc gatgcgccga agagataggt
     1981 gcccgcgacc ggcgcgacga aacggttggt cgcggcgtcg aaacagccct ggtcgttata
     2041 gtctgccacg ttgatgccaa gcgtcgtcca ggtgtctgtg g
//
LOCUS       DTVW01000168            1920 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1230598, whole
            genome shotgun sequence.
ACCESSION   DTVW01000168 DTVW01000000
VERSION     DTVW01000168.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1920)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1920)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1920
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1230598"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..827)
                     /locus_tag="EYO87_02275"
     CDS             complement(<1..827)
                     /locus_tag="EYO87_02275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013066616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH:quinone oxidoreductase family protein"
                     /protein_id="HIC64829.1"
                     /translation="MAETIRIAEITALGQVPVLRDASPPAARPDEVLVRIGAAALNFA
                     DLLKASGQYQEKATPPYVPGLEGAGQVVAAPDGCGLQRGDRVAVLHPGTMAQIVAVPA
                     DACLPLPDAMRDEQAAGFQIAYGTSHLALTMRAKLKPGETLAVLGAAGGVGLTAVEIG
                     RAMGARVIGVARGRERLQAVRAAGADLVIDSDDCPDLKAALRDCGGIDVVYDPVGDRP
                     GAAAFGALKRGGRFLAIGFAGGQPPVLALNHALVKNIAIHGFYWGGYASLDPQARRD"
     gene            1008..1367
                     /locus_tag="EYO87_02280"
     CDS             1008..1367
                     /locus_tag="EYO87_02280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018000491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XRE family transcriptional regulator"
                     /protein_id="HIC64830.1"
                     /translation="MKHGVDVHVGKRIRHRRWMIGMTQQQLADKVGIKFQQIQKYETG
                     MNRVSASRLWDIARAVDVPVSFFFEGLHEGALADEVTGDILADKEALQLVRAYYAMPA
                     AQRRQIFELARVLSDAA"
     gene            1501..>1920
                     /locus_tag="EYO87_02285"
     CDS             1501..>1920
                     /locus_tag="EYO87_02285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011454357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphatase"
                     /protein_id="HIC64831.1"
                     /translation="MEDRQQIIETAHLMADAARRAILPLFRTGILAENKRPAGFDPVT
                     EADRAAETAMRRVLAERRPDDSVLGEEFGSRHGSSGLTWILDPIDGTRAFLCGAPSWG
                     VLIGLRDAGGIRYGLIDQPYLGERFEGGFGIARLTHRG"
BASE COUNT          329 a          640 c          627 g          324 t
ORIGIN      
        1 ctgtcgcgcc gggcttgcgg atccaggctg gcatagccgc cccagtagaa gccgtgaatg
       61 gcgatgttct tgaccagcgc gtgattcagc gcaaggaccg ggggctggcc gccggcgaag
      121 cctatggcca gaaagcgacc gccgcgcttc agggcgccga aggctgcggc gccgggccgg
      181 tcgccgaccg gatcatagac cacgtcgatc cccccgcaat cgcgcagcgc ggccttcaga
      241 tccgggcaat cgtcgctgtc gatgaccaga tccgcaccgg cggcgcgcac cgcctgcaac
      301 ctttcgcgcc cgcgggcaac cccgatgacg cgcgcaccca tcgcccggcc gatctcgacc
      361 gcggtcaatc cgacgccacc cgcggcgccc agcaccgcca gcgtttcgcc cggtttcagc
      421 tttgcccgca tggtcagggc cagatggctg gtgccgtagg cgatctggaa accggccgcc
      481 tgttcgtcgc gcatcgcatc gggcaggggc aggcaggcat ccgcaggcac cgcaacgatc
      541 tgggccatcg tgcccggatg cagcaccgcc acccggtcgc cacgctgtaa cccgcagccg
      601 tcgggcgccg cgacgacctg gcccgcaccc tccagccccg gaacataggg cggcgtggcc
      661 ttttcctggt attggccgct tgccttcagc agatcggcaa agttcagcgc ggcggcgccg
      721 atccgcacca gaacctcgtc cgggcgggcc gcgggcgggc tggcgtcgcg cagcacgggc
      781 acctgtccca aagcggtgat ctcggcgatt cgaatcgtct cggccatttc tgtctctcca
      841 taattaacgc aatgacttca tcccgttgtg ccaacctgtc caaatggaca ggactacgga
      901 aaccccgacc tgtctttttg gtcagaaacg ggcctgttaa ccatgttgac actcgataat
      961 tgtgacacct tgggctactg cctctttaga ttgagcgagg taggacgatg aagcacggtg
     1021 ttgatgttca tgttggtaag cgtatccgcc atcgtcgctg gatgatcgga atgacccagc
     1081 agcagcttgc tgacaaggtc gggatcaagt tccagcagat ccagaaatac gagaccggga
     1141 tgaaccgggt ctcggcgtcc cggttgtggg acatcgcccg cgcggtggat gtccccgtca
     1201 gcttcttctt cgagggcctt catgaaggcg cgctggccga tgaggtcacg ggcgacattc
     1261 tggccgacaa ggaggcgctg caactggttc gcgcctatta tgcgatgccg gccgcgcagc
     1321 gtcggcagat cttcgaactg gcgcgggttc tgtcggacgc tgcctgaaag gcagaagacg
     1381 gccaggaaaa ccgccgctga ccggctggtg tcacggtccg tcttgcaccg gccgccgccg
     1441 ggggtggcgg gtccgggccg atgcggctag acctcgtgac gcaatgtcac gggggcgccg
     1501 atggaagaca ggcagcagat catcgagacc gcgcacctga tggccgatgc cgcaaggcgc
     1561 gcgatcctgc cgctgttccg aaccggcatt ctggccgaaa acaagcgccc ggccggtttc
     1621 gatcccgtaa ccgaggccga ccgtgccgca gagaccgcca tgcgcagggt tctggccgaa
     1681 cgccgcccgg acgattccgt gcttggcgag gaattcggat cgcggcacgg cagcagcggt
     1741 ctgacctgga tcctcgatcc gatcgacggc acccgcgcct ttctgtgcgg ggcgccaagc
     1801 tggggtgtcc tgatcggcct gcgcgacgcg ggcgggatcc gatacgggct gatcgaccag
     1861 ccctatctcg gcgaacgttt cgaaggcggc ttcgggatcg cccgtctgac ccatcgcggc
//
LOCUS       DTVW01000169            1691 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1231187, whole
            genome shotgun sequence.
ACCESSION   DTVW01000169 DTVW01000000
VERSION     DTVW01000169.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1691)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1691)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1691
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1231187"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..564
                     /locus_tag="EYO87_02290"
     CDS             <1..564
                     /locus_tag="EYO87_02290"
                     /EC_number="2.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008281330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acyltransferase"
                     /protein_id="HIC64832.1"
                     /translation="KTRQGVAVFDTDEHPKQTDLDRLASLKPVFRKEGTVTAGNASGI
                     NDGAAALVLARADAARAAGLTPRARILGYAVAGVRPEVMGIGPIPAVRALLARTGLKV
                     ADFDVIESNEAFAAQALAVNEGLGLDPGRVNPNGGAIALGHPVGATGAILTVKALSEL
                     DRTGGAKALITMCIGGGQGIAIAIERM"
     gene            complement(910..1515)
                     /locus_tag="EYO87_02295"
     CDS             complement(910..1515)
                     /locus_tag="EYO87_02295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008559467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VUT family protein"
                     /protein_id="HIC64833.1"
                     /translation="MTRTYLPGILAMAAIVVASNILVQFVIGDWLTWGAFTYPFAFLV
                     TDVMNRVYGAAAARRVVLAGFLVGVICSLAAAGLDRTTLRIALGSGTAFIVAQTLDIA
                     IFDALRGGRWWTAPLASSLVGSALDTALFFSIAFSAILPADGNTGWANEAVPLLGQGP
                     IGPLWISLASADWLVKLGLALLALVPFRLIVRNLLRHPQEI"
BASE COUNT          333 a          550 c          552 g          256 t
ORIGIN      
        1 aagacccgcc agggagtcgc ggtcttcgat accgacgaac acccgaagca aaccgatctc
       61 gaccggctgg ccagcctgaa accggtgttc cgcaaggagg gcaccgtgac cgcaggcaat
      121 gccagcggca tcaatgacgg tgcggcggcg ctggtgctgg cgcgggcgga tgcggcgcgg
      181 gccgcgggcc tgaccccgcg cgcccggatc ctgggctacg cggtcgcggg cgtccggccc
      241 gaggtcatgg gaatcggccc gatcccggcg gttcgggcat tgctggcgcg caccggactg
      301 aaagtcgccg atttcgacgt gatcgaatcg aacgaggcat tcgccgcgca ggccttggcg
      361 gtcaacgagg ggctggggct tgacccgggg cgggtgaacc cgaatggcgg cgccatcgcc
      421 ttgggccatc ccgtcggagc aacaggggcc atcctgaccg tcaaggcgct gtccgaactg
      481 gaccggaccg gcggcgcgaa agccctcatc accatgtgca tcggcggcgg ccaaggcatc
      541 gccatcgcga tcgagagaat gtgatcggcg ccgccgccct gcgacaacaa aagggcgcgg
      601 cctgatcctc ggctgcgccc ttttcggcat cgtctcacga tgcgcggtga aggcccgctt
      661 cgcgcgccgg caccggaaac gggccgccca gatcagacgg cccgcgagtt ccacggagat
      721 ggcccggtta gggatggtta gaatccgtcc ggtcccaatc agggtttacg acccaggggg
      781 ctgcccctag gccacggccc ccctgactgt tccgacacct ctctccaata tcactctcga
      841 cactggacca cctcctttca atgtgttgcc gttgcaaggg aagggtgcca cagatcgaga
      901 ttctgtcaat cagatttctt gggggtgcct caacaaattg cggacaatca gccggaatgg
      961 cacaagggcc agtagcgcca gtccaagttt gaccagccaa tcggcacttg ccagcgaaat
     1021 ccacagcgga ccgatcggtc cttgaccaag cagcggaacc gcctcgttgg cccagccggt
     1081 attgccgtcc gccggcagga tggccgaaaa tgcgatgctg aagaacaggg ccgtatccag
     1141 cgccgatccg accagcgagg atgccagcgg cgccgtccac cagcgcccgc cgcgcagggc
     1201 atcgaaaatg gcgatgtcca gcgtttgcgc gacgatgaag gccgtgcccg atcccagggc
     1261 gatgcgcagc gtggtcctgt caaggcccgc cgcggccagc gaacagatca cccccaccag
     1321 gaaaccggcc agcaccaccc ggcgcgcggc cgccgcgccg tagacacggt tcatcacatc
     1381 ggtgacgaga aaggcgaagg gataggtgaa ggcgccccag gtcagccagt ctccgatgac
     1441 gaactggacc aggatattcg aggccacgac gatggcggcc atggcaagaa taccgggaag
     1501 ataagtgcgt gtcatatgtg gaccgttttg tgcaagggtg cggcgacttg gcctgcggga
     1561 tcgcagacgg aacggtcttt agccctcgac acccggtttg gcaaggatca actctaccac
     1621 ctcattgcgc tgcatgacga agaagttgtc gtccgacagc agagtcagcc gggttcgccc
     1681 cgccgcgtcc t
//
LOCUS       DTVW01000170            1424 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1231838, whole
            genome shotgun sequence.
ACCESSION   DTVW01000170 DTVW01000000
VERSION     DTVW01000170.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1424)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1424)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1424
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1231838"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..110)
                     /locus_tag="EYO87_02300"
     CDS             complement(<1..110)
                     /locus_tag="EYO87_02300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013961757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA recombination/repair protein RecA"
                     /protein_id="HIC64834.1"
                     /translation="MAQASIFDMNDKRGADKQKALDSALAQIERQFGKGS"
     gene            complement(376..>1424)
                     /locus_tag="EYO87_02305"
     CDS             complement(376..>1424)
                     /locus_tag="EYO87_02305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HIC64835.1"
                     /translation="DPDYSELIQINQNANRAASLVGQLLAFSRKQTLRLETLDPRDTL
                     ADLTHLLNRLVGERVGLTITNDPALRPIRADKRQLEQVIMNLVVNARDAMPQGGEINV
                     RADNVSLHKPLSRDRVDLPKGSYVRIRVSDEGCGMSPEVLDKIFEPFFTTKRTGEGTG
                     LGLSTAYGIVKQTGGYIFCDSEPGRGTCFSLYFPAHDAAAESSPAALPEPVSGREHAP
                     DHPASVLLVEDEAPVRAFAVRALRLKGYEVHEADSAESALEMLSDSRLKIDVFVTDVV
                     MPGMDGPSWVRTALRDRPKTRVVFMSGYTDDIFGEGSMPVPNSAFLAKPFTLAELTQT
                     VARQLSAPPGPTLH"
BASE COUNT          243 a          444 c          441 g          296 t
ORIGIN      
        1 atcgagccct tgccgaactg gcgctcgatc tgagccagcg cgctgtccag cgccttctgc
       61 ttgtccgcgc cgcgtttgtc gttcatgtcg aaaatgctcg cctgtgccat gtcgtcctca
      121 catgtatttc acagccatcc gggcgtagca atctgccggg ccgccgcgaa ttgttcactt
      181 cttgttctca cgcctgaatg cccgatccgg gacctcgttt caagtgaaat tggttaaccg
      241 aggcgattct gcctccgatg atgcgcgacg agcggttaac gaatcattac cggattcccc
      301 gatcgtcggc ttttgcctgc ctttgccgtt tttttcgccc cgctccgtgc cggtctgctg
      361 atccgatccg gcgggtcaat gcagcgtcgg tcccggcggc gccgacaatt gacgtgcgac
      421 ggtctgggtc aattcggcca gggtgaaggg cttggcgaga aaggctgaat tcgggaccgg
      481 catgctgcct tcgccgaaaa tgtcgtcggt atagccggac atgaacacaa ccctggtctt
      541 cggccggtcc ctcagcgcgg ttctgaccca gcttggtcca tccatgcctg gcatcacgac
      601 gtcggtgaca aagacatcga tcttcagccg gctgtcggac agcatttcaa gcgcgctttc
      661 ggcgctgtcg gcttcgtgaa cctcatagcc cttcagccgc agggcgcgga ccgcgaaggc
      721 ccggacaggg gcctcgtcct cgaccagaag gaccgaggcg ggatggtcgg gggcgtgttc
      781 acgccccgat accggttcgg gcaaggctgc gggcgaactt tcggcggcgg catcatgcgc
      841 cggaaaatac agcgaaaagc aggtgcctcg cccaggctcg ctgtcgcaga agatatagcc
      901 gccggtctgc ttgacgatac cataggccgt cgacaggccc aggccggtac cctctccggt
      961 gcgcttggtg gtgaagaacg gctcgaagat cttgtccagc acttccggcg acatgccgca
     1021 gccttcgtcg gacacgcgga tgcggacata gctgcctttc ggcaaatcga ccctgtcacg
     1081 cgacaagggt ttgtgcagcg agacgttgtc ggcgcgaacg ttgatctcgc cgccctgcgg
     1141 catggcatcg cgcgcgttga ccaccagatt catgatgacc tgttccagtt gccgcttgtc
     1201 cgcgcggatc ggacgcagtg cgggatcgtt ggtgatcgtc agcccgaccc gttcacccac
     1261 cagacggttc agcagatgcg tcagatcggc cagcgtatcg cgcgggtcca gcgtctccag
     1321 cctcagggtc tgcttgcgcg agaaggccag aagctgcccc acgagcgagg cggcgcggtt
     1381 ggcgttctgg ttgatctgga tgagttcgga ataatccgga tcgc
//
LOCUS       DTVW01000171            2449 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1233123, whole
            genome shotgun sequence.
ACCESSION   DTVW01000171 DTVW01000000
VERSION     DTVW01000171.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2449)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2449)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2449
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1233123"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..156)
                     /locus_tag="EYO87_02310"
     CDS             complement(<1..156)
                     /locus_tag="EYO87_02310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HIC64836.1"
                     /translation="MRLNTISGRFAALTIIFVVLAELFILLPALSRFRLDFLESRLER
                     AQIASLAL"
     gene            420..554
                     /locus_tag="EYO87_02315"
     CDS             420..554
                     /locus_tag="EYO87_02315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007404632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HIC64837.1"
                     /translation="MKRTFQPSNLVRARRHGFRARMATKGGRRVLNARRAKGRKRLSA
                     "
     gene            598..1017
                     /gene="rnpA"
                     /locus_tag="EYO87_02320"
     CDS             598..1017
                     /gene="rnpA"
                     /locus_tag="EYO87_02320"
                     /EC_number="3.1.26.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013066094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HIC64838.1"
                     /translation="MPPLPHPRAEPQPRDDGGAAFAVPLAGCGKMPVVIANRAGFLAA
                     ARARRQGTPGFMLQARDRGDDGPLRVGFTCSKKIGNAVARNRARRRLREIARLGLRHG
                     GRAGWDYVLVGRPEATIARDFDDLQRDLSVALRKIHR"
     gene            1014..1262
                     /gene="yidD"
                     /locus_tag="EYO87_02325"
     CDS             1014..1262
                     /gene="yidD"
                     /locus_tag="EYO87_02325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_354146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HIC64839.1"
                     /translation="MSPLARLLALPVRAYRLVASPWLGNGCRFQPTCSEYALEALQRH
                     GAFRGGWLAIRRIARCHPWGGHGHDPVPGARDSGHDHE"
     gene            1276..2151
                     /gene="ttcA"
                     /locus_tag="EYO87_02330"
     CDS             1276..2151
                     /gene="ttcA"
                     /locus_tag="EYO87_02330"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002721425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiocytidine(32) synthetase TtcA"
                     /protein_id="HIC64840.1"
                     /translation="MPDDTDDTEIHPLFAGAPSSTEFRKLRKRLVRETRAAIEDYGMV
                     RPGERWLVCLSGGKDSYTLLAVLHELQWRGLLPVDLLACNLDQGQPGFPATVLPEFLA
                     ARGVPHRIEYRDTYSIVKEKVPQGRTYCALCSRLRRGNLYRIAREEGCSAVVLGHHRD
                     DILETFFMNLFHGGHLATMPPKLLNEEGDLMVLRPLAFVAEADCDRFARAMAYPIIPC
                     DLCGSQEGLQRVQVKKLLDEWESRSPGRRQIMFRALMNARPSHLLDPNLFNFAGLVAD
                     RSNAMQAADDSLCEH"
     gene            2221..>2449
                     /locus_tag="EYO87_02335"
     CDS             2221..>2449
                     /locus_tag="EYO87_02335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64841.1"
                     /translation="MMRSANWLKTRLLRDGKPRDRTGPLSVLLMRLENFDVLTDHLGR
                     AGIGHLLVSICMRLNRAMRPEDPVQIIAPGVF"
BASE COUNT          433 a          772 c          779 g          465 t
ORIGIN      
        1 cagcgccagc gatgcaatct gcgcccgctc cagacgcgat tccagaaagt ccagccgaaa
       61 gcgtgacaag gccggcagca ggatgaacaa ctcggccagc acgacgaaaa tgatcgtcag
      121 tgcagcgaat cggccggaaa tggtgttcaa tcgcatcttg tccggatcgt cttgctcgtc
      181 gcctgcgtgt tttcggcttt cgcggggccg gtttgcacat caaacgaatg tgatcattcg
      241 ctggttccct ttccagaggc agtcggaaag attgccggcg gcagttgacg cgggctttgg
      301 gctgcattat ccagcggact tcctgcaacc ggcgcatcgc gcggggttat tgctcctgca
      361 catcgccata cgcaattaca gttgatcgaa accgcaaaag accgacccgg agaccgacca
      421 tgaagcgcac tttccaaccg tcgaaccttg ttcgtgcgcg ccgccacggc tttcgcgccc
      481 gcatggccac caagggcggc cgccgcgtgc tgaacgcccg ccgtgccaag ggccgcaagc
      541 gtctgtcggc gtaagccttt ccgccgggta acatccccgc acgtcgaggc aatgaccatg
      601 ccgcccctgc cccatccccg cgctgaaccg cagccaaggg atgatggcgg ggcggcattt
      661 gccgtgcccc tcgccggatg cggcaagatg cccgtggtaa ttgcgaatcg cgccggtttt
      721 cttgccgccg cacgcgcccg gcgtcaggga acgccgggtt tcatgcttca ggcgcgggat
      781 cgcggcgatg atggcccgct tcgcgtgggc ttcacctgct cgaagaagat cggcaacgcc
      841 gttgcccgca accgcgccag gcgccgcctg cgcgagatcg cccggctggg cttgcggcat
      901 ggggggcggg ctggctggga ctatgtcctg gtgggtcgcc ccgaggcgac gatcgcgcgc
      961 gatttcgacg acttgcagcg ggatttgtcg gtcgcgctgc gcaagattca ccgatgagcc
     1021 cgctggcccg cctcctggcg ctgccggtgc gcgcctatcg cctggtcgct tcgccctggc
     1081 tgggaaatgg ttgccgcttt cagccgacct gctctgaata tgcgctggag gcgctgcagc
     1141 gacacggcgc gttccggggg ggctggctgg caatccggcg catcgcgcgg tgccacccct
     1201 ggggcggaca tggccacgat cccgttcccg gggcccgaga ctcgggtcat gatcatgaat
     1261 gagaaggccc aggcgatgcc ggatgacact gacgataccg aaattcatcc gcttttcgcc
     1321 ggcgccccct catcgaccga gttccgcaag ctgcgcaagc gccttgtgcg cgaaacccgc
     1381 gccgcgatcg aggattatgg catggtccgg cccggcgagc gttggctggt ctgtctgtcg
     1441 ggcggcaagg acagctatac gctgctggca gtgctgcacg aattgcagtg gcgcggcctg
     1501 ttgccggtgg acctgctggc ctgcaatctg gatcagggcc agcccggttt cccggccacg
     1561 gtcctgccgg aatttctggc ggcgcgcggc gtgccacatc gcatcgaata tcgggacacc
     1621 tattcgatcg tgaaggaaaa ggtgccgcag ggacggactt actgcgccct gtgctcgcgg
     1681 ttgcggcgcg gcaatctgta tcggatcgca cgggaagaag gatgttcggc tgtcgttctg
     1741 ggacatcatc gcgacgacat tctggaaacc ttcttcatga acctttttca tggcggtcat
     1801 ctggcaacca tgccgccgaa attgctgaat gaagaaggcg atctgatggt cttgcgcccc
     1861 ctggccttcg tggccgaggc cgattgcgac cggttcgcgc gggcgatggc ctatccgatc
     1921 attccctgcg atctttgcgg cagccaggaa ggcttgcagc gcgttcaggt caagaaattg
     1981 ctggacgaat gggaatcgcg cagccccggc cgcaggcaga tcatgtttcg tgccctgatg
     2041 aatgcacgcc cttcgcatct gctggacccg aacctgttca atttcgccgg cctcgtcgcg
     2101 gatcgttcaa atgcgatgca agcggctgac gattccctgt gtgaacatta actgaacaac
     2161 aagcattctg cgctagacct gccaaaggta acccgtggaa gggacagaat gcgccaccga
     2221 atgatgagat ccgcgaactg gctgaaaacg cgactgttgc gtgacggcaa gccccgcgat
     2281 cgcacgggcc ccctcagcgt cctgctgatg cggctcgaaa atttcgatgt tctgaccgac
     2341 catctgggca gggccggaat cgggcacctg ctggtcagca tctgcatgag gctgaaccgc
     2401 gcgatgcgcc cggaagatcc ggtgcagatc atcgcgcccg gcgtcttcg
//
LOCUS       DTVW01000172            2019 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1233550, whole
            genome shotgun sequence.
ACCESSION   DTVW01000172 DTVW01000000
VERSION     DTVW01000172.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2019)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2019)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2019
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1233550"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(107..1093)
                     /locus_tag="EYO87_02340"
     CDS             complement(107..1093)
                     /locus_tag="EYO87_02340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparaginase"
                     /protein_id="HIC64842.1"
                     /translation="MHDAELIELWRGGRRESLHRGHAVICDASGVVEAWGSPAQIVFP
                     RSSCKMIQALPLIESGAADAAGLTDRQLALACASHSGAAIHVAGVSDWLRTLGLDEAD
                     LRCGSHMPRDPAEHRRLTCSGESPCQIHNNCSGKHAGFLTLNRHLGGGAEYIDPDHPV
                     QQAVKAAFEEVTGEVSPGFGIDGCSAPNHACSLVGLANAMVAFARPGGDRRGQAMRRL
                     TLAMRDHPELVAGEGRACTALMRAMDGRVAVKTGAEGVFVAILPDHGLGIALKITDGA
                     TRAAEAAITALLVHLGALPEADPVVERYLTAPIRNWRGMVTGQMRRATAFPA"
     gene            1246..1767
                     /locus_tag="EYO87_02345"
     CDS             1246..1767
                     /locus_tag="EYO87_02345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009563419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64843.1"
                     /translation="MKKTTLRGMAAIAVLVTGLGTASAQESTNVVATEGDWTVFAAQN
                     PKECWAVSPPKSTLNTQDGKEVEVTRGDIRLYVAYRPGQNGEVSFTGGYPFSPDSTVE
                     VDVGGQKFNLFTEGESAWTGSPSDDQKLIGALRAGATAIITGRSSRGTTTKDTFSLSG
                     VTAATNTAKERCQ"
BASE COUNT          347 a          680 c          678 g          314 t
ORIGIN      
        1 tgagggcagc gccccctttc tggtcgtcgt ccgggatgag ggccagaaag ggggcgctgc
       61 cctcatgcgc gattaaagcg gaaccatgta tcggattcgt gacggttcag gccggaaacg
      121 ccgtcgcgcg gcgcatctgg cccgtcacca tgccgcgcca gttgcggatc ggagccgtca
      181 gatagcgttc cacgaccgga tcggcctctg gcagcgcccc cagatgaacc agcagcgcgg
      241 tgatcgcggc ctcggcggcg cgggtggcgc cgtcggtgat cttcagcgca atacccaggc
      301 cgtggtcggg caggatcgcg acgaagacgc cctcggcgcc ggtcttgacg gcgacgcggc
      361 catccatggc gcgcatcaat gcggtgcagg cgcggccctc gccggccacc agctcgggat
      421 ggtcgcgcat cgcaagcgtc aaccttcgca tggcctgacc gcgccggtcg ccgccgggac
      481 gggcaaaggc caccatggcg ttggccagcc ccacgagcga gcaggcgtgg ttcggggccg
      541 agcagccgtc gatgccaaaa ccggggctga cctcgccggt cacctcttcg aaggcggcct
      601 tcacagcctg ctggaccggg tggtccggat cgatatactc cgccccgccg cccagatgcc
      661 ggttcagggt caggaacccg gcatgtttgc ccgaacaatt gttgtggatc tggcagggac
      721 tttcgccgga acaggtcagg cggcgatgtt cggccgggtc gcggggcatg tggctgccgc
      781 agcgcaggtc cgcttcgtcc aggcccagcg tccgcagcca gtccgacacg cccgcgacat
      841 ggatcgcggc accgctgtgg ctggcgcagg ccagggcaag ctggcggtcg gtcaggcccg
      901 cggcatcggc ggcgccgctt tcgatcagtg gcagagcctg gatcatcttg cacgaggaac
      961 gcggaaacac gatctgcgcc ggactgcccc aggcctcgac cacgccgctg gcatcgcaga
     1021 tcaccgcatg gccccggtgc aggctttcgc ggcgtccccc ccgccacagc tcgatcagtt
     1081 cggcatcgtg catcggaatc tccctgacaa ttgcgcgatt ttctgctgtg cgcccctttt
     1141 tcgcgccccg atttcaggta tccttagccc agatggttga aaagaccacg gcaatcggga
     1201 acaacgccgc ccaaagcggc gaaacctatg gcaggaggcc agagcatgaa aaagacgacg
     1261 ctgcgcggca tggcggcgat cgcggtcctg gtgacgggac tggggacggc aagcgcacag
     1321 gaatccacca atgtcgtggc gaccgagggg gactggaccg ttttcgcggc gcagaatccc
     1381 aaggagtgct gggcggtctc gccgccgaaa tcgaccctga acacccagga cggcaaggag
     1441 gtcgaggtga cgcgcggcga catccgcctt tatgtcgcct atcgtccggg ccagaatggc
     1501 gaagtctcgt tcaccggcgg ctacccgttc tcgccggatt cgacggtcga ggtcgatgtc
     1561 ggcgggcaga agttcaacct gttcaccgag ggcgagagcg cctggaccgg cagcccctcg
     1621 gacgatcaga agctgatcgg cgcgctgcgc gccggggcca ccgctatcat caccggccgg
     1681 tcctcgcgcg ggaccaccac caaggatacg ttcagcctgt cgggcgtcac cgcggcgacc
     1741 aacaccgcga aggaacgctg ccagtaaccg gcagcgcagg acccgcgcgc cccgggcgga
     1801 ttgccttgac ggatcgtgat gcgccagcga cgaggccggt tgaaagaccg gcctttctgg
     1861 cctatctgcc tgtctttgtt cctatcgccg gtgacatcat gaccgccccg atcacgcagg
     1921 atgtgctgac cattccccgc aagctgcccg aaaccgggcg cctgaacctt gtcgggctga
     1981 cgcgcgatca gctgcgcgag gcgctgatcg ccgccggca
//
LOCUS       DTVW01000173            2860 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1235088, whole
            genome shotgun sequence.
ACCESSION   DTVW01000173 DTVW01000000
VERSION     DTVW01000173.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2860)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2860)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2860
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1235088"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(71..>2860)
                     /locus_tag="EYO87_02350"
     CDS             complement(71..>2860)
                     /locus_tag="EYO87_02350"
                     /inference="COORDINATES: protein motif:HMM:PF13191.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64844.1"
                     /translation="LGDGIVAVFGLSRANELAASKAVDAALRAVTELAQDKAGQGGFT
                     LRAGVATGEVAVRPDMTREAWPRITGTVTTLAQRVQELAAPGGVMIAEGTRMMLRGQF
                     TLTPVPNQILKGFAQPQMLFVPQIAPHRDVAPGTADLVGRAKECAAIEAARMPVLIVG
                     QAGIGKTAVAQHMAQRAGIATTIQAEGIKSGSSYQPFKDWISWRLKSLTPDFAEITQG
                     FPDLSKADRMSLALIMGLPEGAALLTELSNLALKARIEAGLWRALQSVQRDGMVIFED
                     LHWFDIASFGVLQHILRSPERSRFRLILTSREDSKLGKHLSGLVFETLSLHPLSQGDA
                     HRMLASLGAQDGVNAASLVEQAGGIPLYLDQLAKRALKIGRVEETVPDTLMDLLAARI
                     DDTGPAKPILQRASAIGRIFAVDLLRALDPTSADPVFALEHARAAGVVMQRSAAEWEF
                     AHALLAQAAYHSVLRSNREALHRRIAEILQSSHVDRISRDPALLARHQRKARQIGPAI
                     RSYLAASRIGLLQGAFADAEGHAGTALALCDDLDDASARAEMAIACQTARGSVLMQAQ
                     GFTAEPVRDAFGAVHRIALSSGSLGPNSAAALFGSFSHAIIAGDKSRADAFDALLADL
                     AQSMPAGAGGDEVRLAALATRNCGCFYQGDFRTQFRQIERIRDLYRIADHAGMIARYG
                     MDIFAAAQMFEAPARAISGQIDAVERLVAETDAHQAELSIPAMLPYALIWGAVPLFYG
                     GRQPEALARLRRGMALADEQGAVFWQVTGATWSFIMDPSQSLDEPGLAAFKANIELQR
                     AIGARVGLPYFSACYAERLAAAGRVTEAYHVSSAAVVEARESGLHCWYPEILRIHSGI
                     CRSDNHPGEAEAAMKLALDTATRQGAALWSLRATLDLSCHDVPDDQGLAAALNAFPRD
                     AVLPELGRAKVLLSQ"
BASE COUNT          497 a          992 c          915 g          456 t
ORIGIN      
        1 acgtcgatac cggccagatc ggccgccctg acgcccgcca gaaggggcag gtcgaacgac
       61 aacaggccgg tcattgtgac agaagaactt tggcgcgacc cagttcgggc aggaccgcat
      121 ccctgggaaa ggcattcagc gccgcggcga ggccctgatc gtccggcaca tcatggcatg
      181 acagatccag cgtcgcgcgc aggctccaaa gtgccgcccc ctgccgggtc gcggtatcca
      241 gcgccagctt catcgcggcc tcggcctcgc ccgggtgatt gtcgctgcgg caaatgccgg
      301 aatggatgcg aaggatttcg ggataccagc aatgcagccc gctttcccgc gcctcgacca
      361 ccgctgccga ggaaacgtga taggcctcgg tcacgcggcc tgccgctgcc agacgctcgg
      421 catagcaggc cgagaaatag ggcagaccca ccctggcacc gatcgcgcgc tgcaattcga
      481 tattggcctt gaacgcggca aggccgggtt catccaggct ttgcgacgga tccatgatga
      541 aactccacgt cgcgccggtg acctgccaga acacggcccc ctgttcgtcg gccagcgcca
      601 tgcccctgcg cagccgcgcc agcgcctcgg gttgtcggcc gccgtagaac agcggcaccg
      661 cgccccagat caaggcgtat ggcagcatcg ccggaatcga caattcggcc tgatgcgcgt
      721 cggtttccgc gaccagcctt tcgaccgcgt cgatctggcc cgaaatcgcc cgtgccggcg
      781 cttcgaacat ctgcgcggcc gcaaagatat ccatgccgta acgcgcgatc atgcccgcat
      841 gatccgcgat ccgataaagg tcccgtatcc tttcgatctg gcgaaactgc gtgcggaagt
      901 cgccctggta gaaacatccg caattgcggg tggccagcgc ggccagtcgc acttcgtcgc
      961 ctccggcgcc cgccggcatg ctttgggcca ggtccgccag cagggcgtcg aaagcgtcag
     1021 cccgggactt gtcgccggca atgatcgcat gggagaagct tccgaacagc gccgccgcgc
     1081 tgttaggccc cagcgagccg gacgaaaggg caatcctgtg gaccgccccg aaggcgtcgc
     1141 gaacgggctc tgcggtgaac ccctgcgcct gcatcagaac cgagccgcgc gccgtctggc
     1201 aggcaatcgc catttccgcg cgggccgagg catcgtccag atcgtcgcag agcgccagcg
     1261 ccgtgccggc atgtccttcg gcatcggcaa aggcaccctg cagcagcccg atccggctgg
     1321 ccgcgagata ggaccggatg gccgggccga tctgacgcgc ctttcgctga tgtcgggcca
     1381 gcaatgccgg gtcgcgggat attcgatcga catggctgga ctgaaggatt tccgcaatgc
     1441 gccggtgcag cgcctcgcga ttgctgcgca ggaccgaatg ataggccgcc tgcgccagaa
     1501 gggcgtgggc aaattcccat tcggccgcgg accgctgcat gacgacccca gccgcccggg
     1561 cgtgttccag cgcgaagacc ggatcggcgc tggtcggatc gagggcgcga agcagatcga
     1621 ccgcgaagat gcggccgatc gccgaggcgc gctgcaggat cggcttcgca gggccggtat
     1681 cgtcgatccg ggcggccagc agatccatca gggtgtcggg aaccgtctcc tcgacccgac
     1741 cgatcttgag cgcccgcttg gccaattggt ccagatagag cggaatcccc cccgcctgct
     1801 cgaccaggct ggcggcattg acgccgtcct gcgcgcccag cgacgccagc atccgatggg
     1861 catcgccctg cgacagagga tgcagcgaga gcgtctcgaa taccagcccc gaaagatgct
     1921 tgcccagctt ggaatcctcg cggctggtga ggatcagacg gaaccgggat cgttcgggac
     1981 tgcgcagaat gtgctgcaat acgccgaaac tggcgatgtc gaaccagtgc agatcctcga
     2041 agatcaccat cccgtcgcgc tggacgcttt gcagggcacg ccagagcccg gcttcgatcc
     2101 gggccttcag cgcgagattg gacaattccg tcagaagcgc cgcgccttcg ggcagaccca
     2161 tgatcagggc caggctcatc cgatcggcct tggacaggtc cggaaagcct tgcgtgatct
     2221 cggcaaagtc gggtgtcaac gatttcagcc gccacgagat ccagtccttg aacggctgat
     2281 agctggagcc gctcttgatc ccttcggcct gaatcgtggt ggcgatgccg gcccgctgcg
     2341 ccatgtgctg cgccacggcg gtcttgccga tccccgcctg cccgacgatc agcaccggca
     2401 tccgggcggc ctcgatcgcg gcgcattcct tcgcgcgccc gaccaggtcg gccgttcccg
     2461 gcgccacgtc gcgatggggg gctatctgtg gcacgaacag catctgcggc tgtgcgaaac
     2521 ccttcaggat ctgatttggc accggcgtca gggtgaactg gccgcgcaac atcatcctgg
     2581 tgccttcagc gatcatcacg ccgccgggtg cggccagttc ctgcacccgc tgggcaaggg
     2641 tcgtcaccgt cccggtgatc cgcggccagg cctcgcgcgt catgtcgggg cgcaccgcga
     2701 cctctccggt ggcgacgccg gcgcgcagcg tgaatccgcc ctgccccgcc ttatcctgcg
     2761 ccagttccgt caccgcgcgc agcgccgcat ccaccgcttt cgaggccgcc agttcattcg
     2821 cgcgcgacag gccgaacacc gccacgattc cgtcgcccag
//
LOCUS       DTVW01000174            1720 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1236251, whole
            genome shotgun sequence.
ACCESSION   DTVW01000174 DTVW01000000
VERSION     DTVW01000174.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1720)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1720)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1720
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1236251"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(183..1661)
                     /locus_tag="EYO87_02355"
     CDS             complement(183..1661)
                     /locus_tag="EYO87_02355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019963609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="altronate dehydratase"
                     /protein_id="HIC64845.1"
                     /translation="MAEPMILNPSDNVAILTERGVAPAGHKIARRAIATGEPVFKYGQ
                     IIGYATADISAGDHVHSHNCAFGDHDRAHRPGAGLPAARAALDRYRGPALTFQGYHRE
                     GGQIGTRNFIALVSTVNCSATVIRRAAEELRIEGALDAFPNVDGVAAFAHGSGCGMAD
                     GGPGWRALQRVLTGHAGHPNVGAALFVGLGCEVMQIARMKQELGAAARFHGLTIQQNG
                     GTRATIEAIKLRVRQMLPQVNAALRASAPASALKIGLQCGGSDGFSGITANPALGLAS
                     DMLAAQGASVVLSETPEIYGAERLLLDRAASPDIAQRLLDRIAWWQDYTARNGASLDN
                     NPSPGNKAGGLTTILEKSLGAVAKAGATPLNAVLDYAETITQPGLNFMDTPGYDPVSA
                     TGQIAGGAQLIVFTTGRGSAFGSKPAPTIKLATNDALFHAMCDDMDLNCGDILSAAVT
                     LENKAREIVALIIANASGQPSKSEELGLGDNEFVPWQIGAVL"
BASE COUNT          278 a          606 c          565 g          271 t
ORIGIN      
        1 agcagcccga ggcagagatc ctgcttgatg ccgtggagac cgctttcgcc gcggccgtcc
       61 cgtaatggcc acggcggccg tggcagaagg cgccatggaa cggggcttgc ccgtcggtgc
      121 agggacaatc tccagggcag gacggtagcg tgaagaaaga ccggcacgcc aagcccgaac
      181 tctcacagca cggcgccgat ctgccagggg acgaattcgt tgtcgcccag gcccaattcc
      241 tcgctcttgc tgggctggcc cgaggcattg gcgatgatca gcgcgacgat ctcgcgggcc
      301 ttgttctcca gcgtcacggc cgccgacagg atatcgccgc aattcaggtc catgtcgtcg
      361 cacatcgcgt ggaacagcgc gtcattcgtg gccagcttga tcgtcggcgc aggcttggac
      421 ccgaaggccg agccgcgccc ggtggtaaag acgatcagct gcgccccgcc cgcaatctgg
      481 ccggtggcag ataccgggtc atagcccggc gtatccatga aattcagccc cggctgggtg
      541 atcgtttcgg cataatccag aacggcgttc agcggcgtag cacccgcctt ggcgacggcg
      601 cccagcgatt tttccaggat cgtcgtcagc ccgcccgcct tgttgccggg gcttggattg
      661 ttgtccagcg aggcgccgtt gcgggcggta taatcctgcc accaggcgat ccggtccagc
      721 agccgctgcg cgatgtccgg cgaggcggcg cggtccagaa gcagacgttc cgcgccatag
      781 atttcgggcg tctcggacag caccaccgat gccccctgcg ccgccagcat gtcgctggca
      841 agtccaagcg cgggattggc tgtgatgccc gaaaacccgt ccgaaccgcc gcattgcagc
      901 ccgatcttca gcgccgaggc cggggcggac gcgcgcagcg cggcgttcac ctgcggcagc
      961 atctggcgca cgcgcagctt gatcgcctcg atggtcgcgc gggtgccgcc gttctgctgg
     1021 atggtcaggc cgtgaaagcg cgcggccgcg cccagttcct gcttcatccg ggcgatctgc
     1081 atgacctcgc agcccaaccc cacgaacagc gccgcgccca cattgggatg gcccgcatgg
     1141 ccggtcagca cccgttgcag cgcccgccag cccggcccgc catcggccat gccgcaaccc
     1201 gagccatggg cgaaggccgc aacgccatcg acattcggaa aggcgtccag cgcgccctcg
     1261 atccgcaatt cctcggccgc gcggcggatc accgtggccg aacaattcac ggtcgagacc
     1321 agcgcgatga agttccgcgt cccgatctgc ccgccctcgc ggtgatagcc ctgaaacgtc
     1381 agggccggcc cacgataccg gtccagcgcg gcgcgcgcgg caggcaggcc ggcgccaggg
     1441 cgatgggcgc gatcgtggtc gccgaatgca caattatggc tgtggacgtg atcgcccgcg
     1501 ctgatgtcag cggtcgcata gccgatgatc tggccatatt tgaagacggg ctcgcccgtg
     1561 gcgatggcgc ggcgcgcgat cttgtgcccc gccggcgcga cccccctctc ggtcaggatc
     1621 gcgacattgt cggacgggtt caggatcatc ggctcagcca tcggacggct ctgccgccat
     1681 ggcccgcgcc cccttctgca ccagcccggc cagcgccgcc
//
LOCUS       DTVW01000175            2931 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1239711, whole
            genome shotgun sequence.
ACCESSION   DTVW01000175 DTVW01000000
VERSION     DTVW01000175.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2931)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2931)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2931
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1239711"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(259..921)
                     /locus_tag="EYO87_02360"
     CDS             complement(259..921)
                     /locus_tag="EYO87_02360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_355825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HIC64846.1"
                     /translation="MRALVLGASGGIGAAVCDRLARDGARVTRLSRRDDGLDLTDPTT
                     PGPLAARLERPLDLIFNATGALVIGGHEPEKSFAAIDAQAMARQFALNATGVALAIRH
                     FAPLLRDKGRAVFASLSARVGSIGDNGLGGWVSYRAAKAAQNQIIRTAAIEWQRRNPD
                     SIFVALHPGTVETPLTAKYAARYRTITPDHSARALLDVIAGLTARDSGGFRDWKGEVV
                     PW"
     gene            complement(921..1319)
                     /locus_tag="EYO87_02365"
     CDS             complement(921..1319)
                     /locus_tag="EYO87_02365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008886882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2177 family protein"
                     /protein_id="HIC64847.1"
                     /translation="MKMIILYFSTLIVFLAVDVVGIRFLIRPIFERSIGDLLADPFRL
                     GPAAAFYAFYVVGLLYFVSVPALRDGAPVQALLAGALLGLMCYGTYEFTSLAIMRDWS
                     WAQVVADTAWGGFLTGLSAWAGVTIVRMVG"
     gene            complement(1324..2697)
                     /locus_tag="EYO87_02370"
     CDS             complement(1324..2697)
                     /locus_tag="EYO87_02370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352197.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribodipyrimidine photo-lyase"
                     /protein_id="HIC64848.1"
                     /translation="MTVICWFRRVLRLDDHPALVAAAGSGPVIPLVILDPAEARDHPA
                     SAQRQALSLPRLQAALHGRNSRLILRRGDPAEVLERIARETGATAIHTTEGFPFASDH
                     GLKAAALRGGAALHLHPLADLVPRGSVTTQQGGIYKVFTPFWRALRTTRIEAPLNPPS
                     LTLPETWPDSDGTDWPEARAVMDRGWPVVADHVQPGEDAARDRLDDFLHGPVRDYADH
                     RDQPWRDGTSNLSDALAVGEISARRIWHVGQAAREAGRQGVEGFLREVAWREFARELF
                     HEMPQMDQTCWREEWNDFPWKRDNNDSENWRRGLTGVAMVDAGMRELFVTGRMHNRVR
                     MIAGSYLTKHLLTDWRVGLDWFARTLIDWDAASNAMNWQWVAGCGPDSAPYFRVFNPD
                     TQAGKFDAAARYRDHWLKPDARGAQAFARAAPRSWQIDLDRTPMPAISLSQGRSRALT
                     AYEDFKD"
     gene            2816..>2931
                     /locus_tag="EYO87_02375"
     CDS             2816..>2931
                     /locus_tag="EYO87_02375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003182384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III C-methyltransferase"
                     /protein_id="HIC64849.1"
                     /translation="MRPATPKVLPVIRSALRPGFVSLVSAGPGDPELLTLKAA"
BASE COUNT          512 a         1052 c          932 g          435 t
ORIGIN      
        1 ccggttccgg atgccggcca tcatgccggc cgacaaggcc gccgccgcga tcatgaaagg
       61 gctcgccggc aagcagttcg agatccattt tccgcatcgc ctgacccgga cgttgaagct
      121 gatccgcgcc ctgccctatg ccgcctcgct gcgcctgacc cgaaggctca gccgcgacgg
      181 cgactaggcc gttcgcagcg ccggcgcggg cggcgggcgc ccgtcaggct gtcacgtccc
      241 ttgcgacggg caggccgatc accacggcac cacctcgccc ttccagtcgc gaaacccgcc
      301 gctgtcccgc gccgtcagcc cggcgatcac gtccagcagc gcgcgggcgc tgtggtcggg
      361 cgtgatggtc cgatagcggg cggcatattt tgcggtcagg ggtgtctcga ccgtgcccgg
      421 atgcagcgcg acgaagatgc tgtcgggatt gcgccgctgc cattcgatcg cggcggtgcg
      481 gatgatctgg ttctgcgcgg cctttgctgc gcgataggac acccagccgc ccaacccgtt
      541 atcgccgatc gagccgaccc gcgccgacag agaggcaaag acggcccgcc ccttgtcgcg
      601 cagaagcggc gcaaaatggc ggatcgccag cgccacgccg gtcgcgttca gggcgaattg
      661 ccgcgccatc gcctgcgcgt cgattgccgc gaagcttttt tccggttcat ggccgccgat
      721 caccagcgcg cccgttgcgt tgaagatcag atctaacggc cgctccagcc gggccgccag
      781 cgggcccggt gtcgtcgggt ctgtcagatc caacccgtca tcgcggcgcg acaggcgcgt
      841 caccctggcg ccgtcccggg ccaggcgatc gcagaccgcc gcgccgatcc cgcccgaagc
      901 gcccagaacc agcgcccgca tcagccgacc atgcggacga tcgtcacacc agcccaggcc
      961 gagagcccgg tcagaaaacc gccccaggcg gtgtccgcga caacctgcgc ccatgaccag
     1021 tcgcgcatga tggcaaggct ggtgaattca taagtgccat agcacatcag ccccagcagc
     1081 gcgccggcca gcaaagcctg caccggcgct ccgtcccgca aggccgggac cgaaacgaaa
     1141 tacaaaagcc ccaccacata gaaggcatag aaggccgcag ccgggcccag ccggaacgga
     1201 tcggccagca gatcgccgat ggaacgctcg aagatcggcc ggatcagaaa tctgatcccc
     1261 accacatcca cggcaagaaa cacgatcagt gtcgagaaat agaggatgat catcttcatc
     1321 atgctaatcc ttgaaatcct cgtaagccgt caacgcccgt gatcggccct gcgacagaga
     1381 gatcgcaggc atcggcgtcc ggtccagatc gatctgccac gaccgcgggg ccgccctggc
     1441 gaaagcctgc gcgcccctgg catcaggctt cagccagtgg tcgcgatagc gcgcggcggc
     1501 atcgaatttt ccggcttggg tgtcggggtt gaaaacacgg aaataggggg cggaatccgg
     1561 cccgcatccc gccacccatt gccagttcat cgcgttcgag gccgcgtccc agtcgatcag
     1621 cgtgcgggcg aaccagtcca ggcccacgcg ccaatcggtc agcagatgct tggtcagata
     1681 gctgccggcg atcatgcgga cgcgattatg catccgtccg gtcacgaaca gctcgcgcat
     1741 cccggcatcg accatcgcga cgccggtcag gccgcgtcgc cagttctcgg agtcgttgtt
     1801 gtcgcgcttc cacggaaaat cattccattc ctcgcgccag caggtctggt ccatctgcgg
     1861 catctcgtgg aacagttccc gcgcgaattc ccgccaggcc acctcgcgaa gaaaaccctc
     1921 gaccccctgc cgccccgcct cgcgcgccgc ctgcccgaca tgccagatac gccgggcgct
     1981 gatctcgccc accgcaagcg cgtcggacag gttcgaggtg ccgtcccgcc agggctggtc
     2041 gcggtgatcg gcgtagtcgc gcaccggccc gtgcaggaaa tcgtccagcc ggtcgcgcgc
     2101 ggcgtcctcg ccgggctgga catgatcggc cacgaccggc cagccgcgat ccattaccgc
     2161 cctcgcctcg ggccagtcgg tgccgtcgct gtcgggccat gtctcgggca gggtcagcga
     2221 gggcgggttc agcggcgcct cgatccgggt cgtgcgcagc gcccgccaga atggcgtgaa
     2281 gaccttgtag atgccgccct gctgcgtcgt gaccgagccg cgcggcacca gatcggccag
     2341 cggatgcagg tgcaacgcgg ccccgccgcg cagggcggcc gccttcaacc cgtgatcgct
     2401 ggcaaagggg aagccctcgg tcgtgtggat tgccgtggcg ccggtctcgc gcgcgatccg
     2461 ttccagaacc tcggccggat cgccccggcg caggatcagg cgactgttgc ggccatgcag
     2521 cgcggcctga agccggggca gcgacagcgc ctgacgctgg gcgctggccg gatgatcgcg
     2581 cgcctctgcc ggatccagga tcacaagcgg gatgaccggt cccgaaccgg ctgccgcgac
     2641 cagggcggga tgatcgtcca gccgcagcac acgtcgaaac cagcagatta ccgtcatcgt
     2701 ccaaccctgt tagttgcctg caaagacacg catgaaacgg ccgaaagttt caagcaaagc
     2761 gcaaggagcc ggccgggcgc gccattgtca gccccgccgt cggtgatata gctggatcag
     2821 acccgccacc ccgaaagtcc tgcccgtgat ccgatccgcc cttcgtcccg gcttcgtctc
     2881 gctcgtctcg gccgggccgg gcgatcccga actgctgacg ctgaaggccg c
//
LOCUS       DTVW01000176            1321 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1242981, whole
            genome shotgun sequence.
ACCESSION   DTVW01000176 DTVW01000000
VERSION     DTVW01000176.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1321)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1321)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1321
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1242981"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..424
                     /locus_tag="EYO87_02380"
     CDS             <1..424
                     /locus_tag="EYO87_02380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011539986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HIC64850.1"
                     /translation="GSIFAGWLGNRYSRKYLLAGIYALRTIAAAAFILAPITPASVVA
                     FSLVMGGLWLATVPLTSGLVAHLYGLRYMGTLYGFVFLSHQIGSFLGVWLGGTMYDIY
                     GDYTLVWWVGVGVGAFSALIHLPVREAPSRLSPAAQAA"
     gene            complement(442..1035)
                     /locus_tag="EYO87_02385"
     CDS             complement(442..1035)
                     /locus_tag="EYO87_02385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64851.1"
                     /translation="MKILAVLIACLVAGPALAASGTDPTWPCIQPKQPRLSLGQVWAG
                     PVPDQAVLSLAADPRIADLADRLEQRRLPIEQAEKDIADFARDADAARLTALMQAIFD
                     RIESERSALIAGIARYGQKQVALAKMIEDRRSRMARLEAEENPDFDAMDAEEKALDWD
                     QRIFTERQKSLTYVCETPVILEQRVFALARAIASHLP"
     gene            complement(1032..>1321)
                     /locus_tag="EYO87_02390"
     CDS             complement(1032..>1321)
                     /locus_tag="EYO87_02390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011746380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="multidrug ABC transporter permease"
                     /protein_id="HIC64852.1"
                     /translation="ENFAGVMNFVIFPMFFASSALYPLWRMGESSTLLHDISAVNPFT
                     HAVELIRFALYLQVNWLSLAVVLGFLAGFFAGAVFMYDPSKGLWARRKGKA"
BASE COUNT          224 a          428 c          421 g          248 t
ORIGIN      
        1 gggctcgatc ttcgcgggct ggctgggcaa ccgatacagt cggaaatacc ttctggcggg
       61 gatctatgcc ctgcgcacca tcgccgcggc cgccttcatt ctggcgccga tcaccccggc
      121 cagcgtggtc gccttctcgc tggtcatggg cgggctgtgg ctggcgacgg ttccgctgac
      181 ctcgggcctg gtcgcgcatc tctacggtct gcgctatatg ggaacgcttt acggctttgt
      241 cttcctgtcg caccagatcg gctcgtttct gggggtctgg ctgggcggga cgatgtacga
      301 catctatggc gattacacac tggtctggtg ggtgggcgtc ggcgtcggcg ccttcagtgc
      361 cctgatccac ctgcctgttc gcgaggcgcc ctcgcgactt tcacccgcag cgcaggccgc
      421 ctgaaacggc gccgccgccg atcacggcag atggctggca atggcgcggg ccagggcaaa
      481 gacacgctgc tccaggatta ccggcgtttc gcagacatag gtcagcgatt tctggcgttc
      541 ggtgaagatg cgctgatccc agtccagcgc cttttcctcg gcgtccatgg catcgaagtc
      601 gggattttcc tcggcctcca gccgggccat ccggctccgg cgatcctcga tcatcttcgc
      661 cagtgcgacc tgtttttgac catagcgcgc gatcccggcg atcagcgcgc tgcgctcgga
      721 ttcgatccgg tcgaaaatgg cctgcatcag cgcggtcagc cgggccgcat cggcatcccg
      781 ggcgaaatcg gcgatgtcct tttcggcctg ctcgatcggc aggcgacgct gttccagtcg
      841 atcggccaga tccgcgatcc ggggatccgc cgccaggctc agcacggcct ggtccggcac
      901 cggtccggcc cagacctgac ccagcgaaag ccgcggctgt ttgggttgga tacagggcca
      961 tgtcggatcg gtcccgctgg ccgccagggc ggggccggcg accagacagg cgatcaggac
     1021 cgcaaggatt ttcatgcttt tccctttctg cgggcccaaa ggccctttga cggatcatac
     1081 atgaacaccg cccccgcgaa gaaccccgcc agaaagccaa ggaccaccgc cagggacagc
     1141 cagttcacct gaagatacaa cgcgaagcgg atcagttcga ccgcgtgggt aaagggattc
     1201 acggccgaga tgtcgtgcag cagggtcgag ctttcgccca tccgccacag cggatagagc
     1261 gcggaggagg cgaaaaacat cgggaagatg acgaagttca tgacgcccgc gaaattctcc
     1321 a
//
LOCUS       DTVW01000177            1557 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1244674, whole
            genome shotgun sequence.
ACCESSION   DTVW01000177 DTVW01000000
VERSION     DTVW01000177.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1557)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1557)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1557
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1244674"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            1347..>1557
                     /locus_tag="EYO87_02395"
     CDS             1347..>1557
                     /locus_tag="EYO87_02395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014971987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIC64853.1"
                     /translation="MTQVQLRSISKRFGGFTAIENIDLDIRSGELVALLGPSGCGKTT
                     TLRMIAGLENPTTGEIHFDDRDVSDL"
BASE COUNT          266 a          448 c          563 g          280 t
ORIGIN      
        1 gatcattgcc gtgccgaagg cgcgggattc atcctgttgc tgcatggcgg gttcaccatg
       61 ggcgatgtcg cgcgccagat cgcggcatcg gatcttccca tgggcgtctg ggccacgccc
      121 gaaccgagcc acgaaggcga tatccagctg aacagtttcg tgtcgctgaa catgacgatg
      181 tcgattgccc gtggggtgcg tgatctgcgc gatgccccgg tgcagtggta tttcggcgcc
      241 ccctcggacg cggcacttcg ggcccggctg cggcagaccc tgatggcggt caggacggct
      301 cacggactga agggctcgca tgtcgggctt gtcggcgggc tggcgccgac attctacaac
      361 atggatgtgt cgcaggccgg gctgatgtcg gcgcttggtg tggcgttcgc gcatgtcgac
      421 atgcacgaga tgaccgggcg gatggatgcc gccgatgccg cagaagtcgg cgcggaggtg
      481 gctgacatgg cagccgcggc cgagattcgc ggcgtgtccg acgaccagat ggcgctgacg
      541 gcacgggcgg cgctggcgct gcgcgcgatc gcgggcgatc acggatttga cgcgctggcg
      601 gtttcggact ggcccgcatt gcaacaagcc ccgggaatgc atccgggtgc ggcgttcagc
      661 tggatcgagg aacaggacaa cctgcccgtc gcctcggaag gggacgtgat gggcgcggtg
      721 acgcagatgg cggtccggga gatgaccggg cgggtcggct gcctgttgga catgacctcg
      781 ccgcagatgg accgcgaccg gatcctgatg tggcatggcg ggggcggacc gctatacatg
      841 gcgcgggatc gcgcagcatg gatcaaccac ccgatgatcg gacgcggcac cgccgagggg
      901 ccgagatttg gcgcgatagc cgacttcgag ttcggcgaag ggccgcagac ggttctgcgc
      961 ctcgcgcgcg atggcgatgc gttcttcgcc atcgagggcg atgtcgtccg cgccgaggaa
     1021 agcggcttca ccggatgtcg gggctgggtc agcaactttt cggaccgctc gggcggggca
     1081 agcgccgcat ccgtcgtgac cagcgtgatg gaacacgggc tggaacatca tttcgtcatg
     1141 gtgcccggcc gctggcgcga tgcgttcgaa gaattcggcg gctggtccgg catgaagcgg
     1201 ctggcgctga tcgcgcccca tgcgggactg gccgatcgat aggcgcgatc gcacagatat
     1261 ccgttgacag atcgggcgct taccgcataa atttgtatct acaaatttga ccgcagcaat
     1321 tttggtccgg acgggggtca gacgacgtga cacaagtgca gctcaggtcc atcagcaagc
     1381 ggttcggcgg gttcaccgcg atcgagaata tcgatctgga tatccggtcc ggagagctgg
     1441 tcgcgctgct gggtccatcc ggttgcggca agacgacgac gttgcggatg atcgccggac
     1501 tggaaaatcc gaccaccggc gaaatccatt tcgacgatcg cgatgtttcg gatttgc
//
LOCUS       DTVW01000178            1287 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1245148, whole
            genome shotgun sequence.
ACCESSION   DTVW01000178 DTVW01000000
VERSION     DTVW01000178.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1287)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1287)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1287
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1245148"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..923)
                     /locus_tag="EYO87_02400"
     CDS             complement(<1..923)
                     /locus_tag="EYO87_02400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64854.1"
                     /translation="MTSIDTPSRGRGLGMGLAVVLAWLLGLAITLPAEWDRVRTGLSE
                     QQGLAAWFADIIIDSTPYFLVLAVSPLLVLVVWLVSDGKRSGRRQVGWRRWLAAGPGD
                     GGRGALAVAVFVGGLSILASAHVASRHPPAAPTVCFGELPPAYHDEYSYLFQARTLID
                     GRLSYPSHPRLPRLFDQMHVLNEGRFASRYFPGVGAWIAPFLAIGHPSQGHWLAGAIA
                     AMAIFGAGRELAGNGTGLLAGVLAATSPGMAVFSNLLLSHHPTLAGLSVFLYLFLVMQ
                     RNGCAGCAAASGVGLALAMLCRPLTAAAVALP"
     gene            1062..>1287
                     /locus_tag="EYO87_02405"
     CDS             1062..>1287
                     /locus_tag="EYO87_02405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_456657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HIC64855.1"
                     /translation="MKRVALLTGVSGQDGSYLAEFLLERGYLVHGLVPFPRAALAVPG
                     VSLHFADLTDASGLGAILEEVEPDEVYNLAA"
BASE COUNT          238 a          480 c          409 g          160 t
ORIGIN      
        1 ggcagcgcca ccgccgcggc ggtcagcggt cggcagagca tcgccaatgc cagtccgaca
       61 cccgaagcgg ccgcacagcc ggcacaaccg ttccgctgca tgacgaggaa caggtagagg
      121 aacaccgaga gtccggcgag tgtcggatgg tgcgagagca gcaggttgct gaagaccgcc
      181 atcccgggcg aggtcgcggc caggaccccg gccagcaacc cggtgccgtt gcccgccagt
      241 tcccgcccgg ctccgaagat cgccatcgcc gcgatcgccc cggccagcca gtggccctgc
      301 gagggatggc cgatcgccag gaacggcgcg atccacgctc cgacacccgg aaagtaccgg
      361 ctggcaaacc ggccttcgtt caagacgtgc atctggtcaa acagcctggg cagccgcgga
      421 tggctggggt agctcagccg cccgtcgatc agcgtcctgg cctggaacag gtagctgtat
      481 tcatcgtggt aggccggtgg caattcgccg aaacacaccg tcggtgccgc gggcggatgc
      541 cggctggcga catgggcgct ggcgaggatc gagaggcctc cgacgaagac cgcgaccgcc
      601 agggcaccgc gcccgccgtc ccccgggccg gccgccaacc accgccgcca gccgacctgg
      661 cgacgacccg accgcttacc gtcactcacc agccacacca ccaggaccag cagcggcgaa
      721 accgccagca ccaggaagta cggcgtcgag tcgatgatga tatcggcgaa ccaggcggcc
      781 aggccttgct gttcggacag gcccgttcgc acccggtccc attcggccgg caacgtgatc
      841 gccagaccca acagccaggc cagcacgacc gccaggccca tgcccaggcc gcggcctctc
      901 gaaggcgtat cgatcgacgt catctgcagg ccgaaacgcc cccgagaaac agctcgatcc
      961 cccccggaac cgtcgcgacc cgccgccgcc ggcagcgctt gacgctccca accaccgcca
     1021 atcatactcg ggagcgtctc aacgacggaa caggagtcgc cgtgaaacgc gttgcactgc
     1081 tgaccggagt ctccggccag gatggctcct acctcgccga attcctgctc gaacgcggct
     1141 acctggtcca cgggctggtc cccttccccc gggcagcact cgccgtcccg ggagtttccc
     1201 tgcacttcgc cgacctgacc gatgccagcg ggctgggggc gattctcgag gaggtcgagc
     1261 cggacgaggt gtacaacctg gccgccc
//
LOCUS       DTVW01000179            1045 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1247778, whole
            genome shotgun sequence.
ACCESSION   DTVW01000179 DTVW01000000
VERSION     DTVW01000179.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1045)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1045)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1045
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1247778"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..647
                     /locus_tag="EYO87_02410"
     CDS             <1..647
                     /locus_tag="EYO87_02410"
                     /inference="COORDINATES: protein motif:HMM:PF01610.15"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HIC64856.1"
                     /translation="AVLKRSSAWYFEEYLKQSWANGIRSGNALFSLIRERGYEGSLSN
                     LQRLLAGWRRAEKQEQGGPFREHQILEPVRDPETGHAISPVIAAALCIKPRGKLTSDQ
                     ARKVEALKEGSPAFTTMRRLAMRFNGIMRSRKADPLPAWIDDAIETDLVPIVRFARTL
                     NRDFDAVKNAIEMPWSNGQAEGQINRLKTLKRAMYGRAGPELLRARMLPFRHTN"
     gene            complement(746..970)
                     /locus_tag="EYO87_02415"
                     /pseudo
     CDS             complement(746..970)
                     /locus_tag="EYO87_02415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006932634.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="CoA ester lyase"
BASE COUNT          235 a          331 c          312 g          167 t
ORIGIN      
        1 gcgccgtcct caaacgctcg tccgcgtggt attttgaaga gtacctgaag caaagctggg
       61 caaacggcat tcgcagcgga aatgcgctgt tctccttgat ccgagaacgc ggatacgagg
      121 gcagcctgtc aaatttgcaa cggctcttgg ccggatggcg cagagccgaa aaacaggaac
      181 aagggggtcc cttcagggag caccaaatac ttgaaccggt ccgggacccg gaaacaggcc
      241 acgcaatatc gccggtcatc gccgcggcgc tctgcatcaa accaagagga aaacttacct
      301 cggatcaggc aagaaaagtc gaagctctca aggaaggctc gcctgccttc acaacgatgc
      361 ggcgcctcgc catgcgtttc aatggcatta tgcgcagccg caaagcagac ccgcttccag
      421 cctggataga cgacgcgatc gaaaccgacc tggtgcccat cgtgcgcttt gcccgcacat
      481 tgaaccggga cttcgatgcg gtcaaaaacg caatcgagat gccctggagc aacggccagg
      541 cggaaggtca gatcaaccgc ctgaaaaccc tcaaacgcgc catgtacggc cgcgccggtc
      601 cagaattgtt gcgggcgaga atgctcccat tccgccacac aaattgagga tgaccccttt
      661 tgacggggac taacagtttc atcggaagag gtatctttct gttgagggtg gactgggacc
      721 ggcgccagtg atccgaaggc cgggatcagt cgggccgcgc cgcctcgagt atatgccgcg
      781 cgcggatgcg aaccggctcg tcgaccatcg cgccgtcaac cgcgaccgct ccgtcgcccg
      841 agccgaggac acgcatcgcc cagtcaattt catcggccgt cggggcgaaa cctcgcagca
      901 cctcgggcac ctgccgcggg tggatgcaca gcttcccgct cataccaagg gcccgcgcat
      961 gctcggcatc ggcgcgggtc gcggaaacgc aggacaaccg gctcggcctt cgcggtatcc
     1021 gggccggcag ccagcaacag gtcga
//
LOCUS       DTVW01000180            3752 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1248028, whole
            genome shotgun sequence.
ACCESSION   DTVW01000180 DTVW01000000
VERSION     DTVW01000180.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3752)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3752)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3752
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1248028"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..283)
                     /locus_tag="EYO87_02420"
     CDS             complement(<1..283)
                     /locus_tag="EYO87_02420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate O-methyltransferase"
                     /protein_id="HIC64857.1"
                     /translation="MPADDHQDDDSPAERKMRFLFQLRSRGVTDPRVLATMERIDRGL
                     FVRGQFADRAYEDTPLPIPCGQTISQPSVVGLMTQALNVGPRDTVLEIGT"
     gene            complement(286..1119)
                     /gene="surE"
                     /locus_tag="EYO87_02425"
     CDS             complement(286..1119)
                     /gene="surE"
                     /locus_tag="EYO87_02425"
                     /EC_number="3.1.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017927412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HIC64858.1"
                     /translation="MRILITNDDGINAPGLQVLAEIAAEIAGPDGEVWTVAPAFEQSG
                     VGHCISYSHPTMIAELDQRRYAAEGSPADCVLAAISDVMADDPPDLVLSGVNRGNNSG
                     ENVMYSGTVGGAMEAALQGLPAIALSQYMGAATAVLNDPFEAARRHGPALIRRLLDHG
                     DWTSDQDFRLFYNINFPPSGAEGVRGTRVAAQGRRQGTRFGVVPYTAPNGRRFMWVAG
                     GSQTAPAGAGSDVDANMRGYVSVTPMRADLTCHASLTGLAASLDEDHDAESPASQPGT
                     A"
     gene            1291..2205
                     /locus_tag="EYO87_02430"
     CDS             1291..2205
                     /locus_tag="EYO87_02430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HIC64859.1"
                     /translation="MQIYLPIAEVSVNAFTLVGLGGVVGLMSGLFGVGGGFLITPLLF
                     FIGIPPPIAVATGANQVVASSVSGVLAHVKRKSVDFRMGWVLLAGGLAGSSVGVWVFT
                     LLQRIGQVDLVVQLSYVVFLGLIGMMMLQESIRSLRRSRNPTFRKRLHQHNWVHRWPM
                     KMKFRASGLYISAIPVLLVGLAVGVLAAIMGVGGGFIMVPAMIYLLGMPTKVVVGTSL
                     FQITFVTAFTTLMHAVSYNTVDIMLAVLLIIGGVVGAQIGTSLGARLRAEQLRILLAL
                     MVLLVCGKLALDLFLRPDELYSITSGAR"
     gene            2205..3098
                     /locus_tag="EYO87_02435"
     CDS             2205..3098
                     /locus_tag="EYO87_02435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011749008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64860.1"
                     /translation="MVARAAILTLLVSLGAAAVLAQDQTAPGSTVPLAPRGQDAYPTY
                     PDPGRPRVIVPENVERPGEQVVAGLSSDSIAITASFDGSEILIYGAVKRETPIPDGPP
                     LQVIMTIEAPSQSLTVWKKERKLGIWINTKRVEVGAAPGFYVVATTGPLDQILRPEWD
                     QRYRISLPLALRAMGGNNQVADVVPYTAALIRLREANRLYRLDQGSVKLADQTLFRAD
                     VRLPANLIEGDYKTRIFLLRDGRVIDVYRAPIEVRKVGLERWLYRMAFDQPLLYGLMS
                     LAVAVAAGWGASGIFRKLRRA"
     gene            complement(3285..>3752)
                     /locus_tag="EYO87_02440"
     CDS             complement(3285..>3752)
                     /locus_tag="EYO87_02440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011049288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA ester lyase"
                     /protein_id="HIC64861.1"
                     /translation="GAADFAASMGMATTGIGGTQENYYMIREGQKYWSDPWHWAQTAI
                     VSACRTHGLLPVDGPFGDFSDQDGFIAQARRSATLGMVGKWAIHPGQIALANAVFSPS
                     EAAVTEAKEILAAMERAKAEGAGATVYKGRLVDIASIKQAEVIVRQSELIAAD"
BASE COUNT          568 a         1265 c         1247 g          672 t
ORIGIN      
        1 cggtgccgat ctccagcacc gtatcgcgcg ggccgacatt cagcgcctgg gtcatcaggc
       61 cgacgaccga gggctggctg atcgtctgtc cgcaggggat gggaagcggc gtatcctcat
      121 aggcgcggtc ggcgaactgg ccgcgcacga acagaccccg gtcgatccgc tccatcgtcg
      181 ccagcacgcg cggatcggtc acgccgcgcg accgcaactg gaacagaaag cgcatcttgc
      241 gctcggccgg gctgtcgtcg tcctggtgat cgtctgcggg cattgtcagg cggttccggg
      301 ctggctggcg ggactttccg catcatgatc ctcgtccagc gaggcggcaa gccccgtcag
      361 cgaggcatgg caggtcagat cggcgcgcat cggcgtgacc gagacgtagc cccgcatgtt
      421 cgcgtccaca tcgctgcccg cgcccgcagg cgccgtctgc gacccgcccg cgacccacat
      481 gaagcgccgc ccgttcggcg cggtataggg cacgacaccg aagcgcgttc cctgccggcg
      541 gccctgcgcg gcgacccgcg tcccgcgcac cccctcggca ccggagggcg gaaaattgat
      601 gttgtagaac agccggaaat cctggtccga ggtccagtcg ccatggtcca gcagccggcg
      661 gatcagcgcc gggccatgac ggcgcgcggc ctcgaacgga tcgttcagaa cggcggtggc
      721 ggcacccatg tattgcgaca gcgcgatcgc cggcaggccc tgaagcgcgg cctccatcgc
      781 gccgccgacg gtgccggaat acatcacgtt ctcgcccgaa ttgttgcccc ggttcacgcc
      841 cgacagcacc agatcgggcg gatcatccgc catcacgtcc gagatcgccg ccagcacgca
      901 atcggccggg ctgccctcgg cggcatagcg gcgctggtcc agttcggcga tcatggtggg
      961 atgggaatag ctgatgcaat ggccgacgcc ggattgttcg aacgcgggcg cgacggtcca
     1021 gacctcgccg tccgggcccg cgatttcggc cgcgatttcg gccagaacct gaaggcccgg
     1081 cgcgttgatc ccgtcgtcat tggtgatgag tatccgcatc cggtcgtccc tgtcccgacg
     1141 cgcgcgggtg acgcgcctgt tgctggcaat ccccatatcg tgattagcgg gccgcgccat
     1201 cgccttcaac ccgttgacgc aggaaccgaa agccgtttga ccttgtgacc aagtggctgc
     1261 atgctgcgtc acggcaaaac atcacggccc atgcagatct accttcccat cgccgaggta
     1321 tcggtcaacg ccttcacgct ggtgggtctt ggtggcgtgg tcggcctgat gagcggattg
     1381 ttcggcgtcg gcggaggctt tctgatcacg ccgctgctgt tcttcatcgg catcccgccc
     1441 cccatcgcgg tggccacggg cgccaatcag gtcgtggcct cgtcggtgtc gggcgtgctg
     1501 gcccatgtga aacgcaagag cgtcgatttc cggatgggct gggttctgct ggccggcgga
     1561 ctggccggat cgtcggtggg cgtctgggtc tttacgctgc tgcagcggat cggccaggtc
     1621 gatctggtgg tgcagctttc ctatgtcgtg tttctgggcc tgatcgggat gatgatgctg
     1681 caggaaagca tccgatccct gcgccggtcg cgaaacccga ccttccgcaa gcggctgcac
     1741 cagcacaact gggtgcatcg ctggccgatg aagatgaagt ttcgcgcctc ggggctgtac
     1801 atcagcgcga tcccggtgct tctggtcgga cttgccgtgg gcgtgctggc cgcgatcatg
     1861 ggtgtcggcg gcggcttcat catggtgccg gcgatgatct atctgctcgg aatgccgacc
     1921 aaggtcgttg tcggcacctc gctgttccag atcaccttcg tgaccgcctt caccacgctg
     1981 atgcacgccg tcagctacaa cacggtcgat atcatgctgg cggttctgct gatcatcggt
     2041 ggcgtggtcg gggcgcagat cggcaccagc ctgggcgcgc ggctgcgggc ggaacagctg
     2101 cggatccttc tggcgctgat ggtgcttctg gtctgcggca agctggcgct ggatctgttc
     2161 ctgaggccgg acgagcttta ctcgatcacg tcgggggcgc gctgatggtg gcaagggcgg
     2221 cgatcctgac cctgcttgtg tcgctgggcg cggcggcggt ccttgcccag gaccagaccg
     2281 cgcccggatc gacggtgccg ctggcgcccc gcgggcagga cgcctatccg acctatcccg
     2341 atcccggccg cccgcgcgtc atcgtgcccg agaacgtcga gaggccgggc gaacaggtgg
     2401 tggcgggtct gtccagcgat tccattgcca tcaccgccag tttcgacggc tccgagatcc
     2461 tgatctacgg cgcggtcaag cgcgagaccc cgatccccga cggcccgccc ctgcaggtca
     2521 tcatgacaat cgaggccccc tcgcagtcgc tgacggtctg gaagaaggaa cgcaagctgg
     2581 ggatctggat caacaccaaa agggtcgagg tcggcgccgc ccccggtttc tacgtggtcg
     2641 cgaccaccgg cccgctggat cagatcctgc gccccgaatg ggaccagcgc taccgcatct
     2701 cgctgccgct tgccctgcgt gcgatggggg gcaacaatca ggtcgcggac gtggtgccct
     2761 ataccgcggc cctgatccga ctgcgcgaag caaacaggct gtaccggctg gatcagggca
     2821 gcgtcaagct ggccgaccag accctgttcc gcgccgatgt ccggctgccc gccaacctga
     2881 tcgaggggga ttacaagacc cgcatcttcc tgctgcgcga cggtcgggtc atcgacgtct
     2941 atcgcgcgcc catcgaagtg cgcaaggtcg gtctggaacg ctggctctac cgcatggcct
     3001 ttgaccagcc gctgctctac gggttgatgt cgctggccgt cgcggtcgcc gcgggttggg
     3061 gcgcatcggg gattttccgc aagctgcgcc gggcctgaca acgggactcc ggcggtttcg
     3121 tcacgccccg cgctatccgg cagagggccc gcgggacgca ctttccgggg accagcgata
     3181 cgggcgccgc ggacgcgaca ggccccgttc gatccgcacg gggcctgtcc ctcccgcgtc
     3241 gcgggccggc cccctccact ggtccggacc cgctgggtgt tgcgtcaatc tgcggcgatc
     3301 agttcggatt gccgcacgat cacctcggcc tgcttgatcg aggcgatatc gaccagccgc
     3361 cccttgtaga cggtggcgcc cgcgccctcg gccttggccc tttccattgc cgccagaatc
     3421 tctttcgcct cggtcacggc tgcctcggag ggcgagaaga ccgcgtttgc cagggcgatc
     3481 tggccgggat ggatcgccca tttgccgacc atgcccagcg tcgccgaacg ccgtgcttgc
     3541 gcaatgaatc cgtcctggtc cgagaaatcg ccgaaaggac cgtcgaccgg cagcaggccg
     3601 tgcgtccggc aggccgagac gatcgcggtc tgcgcccagt gccagggatc ggaccagtat
     3661 ttctgaccct cgcgaatcat gtaatagttt tcctgcgtgc cgccgatccc ggtcgtggcc
     3721 atgcccatcg aggccgcgaa atcggccgcg cc
//
LOCUS       DTVW01000181            2167 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1248902, whole
            genome shotgun sequence.
ACCESSION   DTVW01000181 DTVW01000000
VERSION     DTVW01000181.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2167)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2167)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2167
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1248902"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1192)
                     /locus_tag="EYO87_02445"
     CDS             complement(<1..1192)
                     /locus_tag="EYO87_02445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010396018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HIC64862.1"
                     /translation="MQMIARRAGSVPFDPFYDPMTARGLGPGSDYAPTYWIDTAGPAP
                     EDDGPVTADMDVDVAVIGSGYTGLSCAIHLARMHGIKATVLEANGVAYGCSTRNGGQA
                     QISSGRLKRSQWIKRWGLDTAQGLHAEVTEAFDLFRGLIRDHGIDCQPQDGGHYYIAH
                     KASAMPALESETRLLNDTFGYGARMMGRDELHDTVVRDHEAHGAMWEPDGTGIHAAKL
                     AFGYLRVARELGARVHTDSPVQGWLLKDGIHHLRTPGGTIRARRVAVATAAYAPRGLH
                     PRLRDRLMPIMSNSVVTRVLTPSELDEVGIRKLSPLTDTRTLRHYYRLLPDNRLQIGS
                     RAAITGRDAANPAHLNALREGMARKFPALRGIDLDYSWWGWVDVSHDMMPRITGLPDL
                     PGAFY"
     gene            complement(1201..1605)
                     /locus_tag="EYO87_02450"
     CDS             complement(1201..1605)
                     /locus_tag="EYO87_02450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HIC64863.1"
                     /translation="MTTTTRALTADDLKATFDAFNRHDIDGVMTHFADDCVFFTVAGE
                     NEYGNRIEGKAAIARAFEGVWSAMPDVQWADHSHFLSEDGTRGVSQWTFRATNPDGTR
                     TEVQGADLFRIEGGRIVEKQAIRKQRPAIPAK"
     gene            complement(1622..>2167)
                     /locus_tag="EYO87_02455"
     CDS             complement(1622..>2167)
                     /locus_tag="EYO87_02455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_345191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HIC64864.1"
                     /translation="FYTLFVGAAIYRELDLREVIKSLDTTTWLAGRVLLVLFTATIFG
                     RILVENDVPAVIAGGILSLTTNLYLIWAMVIGLLLVIGMFMETLAAIMILVPVMLPVA
                     YMMGIDPIHFGIVMIATLSVGFQTPPLGENLFIASGISGVSIERISLRAIPFALASVT
                     AIFIIAIFPGIALWLPRMMGY"
BASE COUNT          375 a          689 c          729 g          374 t
ORIGIN      
        1 cgtagaaggc gccgggcagg tccggcaggc cggtgatgcg gggcatcatg tcatggctga
       61 catcgaccca gccccaccag gaataatcca gatcgatccc gcgcagggcc ggaaatttcc
      121 gcgccatccc ctcgcgcagc gcgttcagat gcgccggatt ggccgcgtcg cggccggtga
      181 tcgcggcccg cgatccgatt tgcagccggt tgtcgggcag cagccggtaa tagtggcgca
      241 gggtccgggt atcggtcagc ggcgacagtt tcctgatgcc gacctcgtcc agttccgacg
      301 gtgtcagaac gcgggtcacg acgctgttgg acatgatcgg catcagccgg tccctcagcc
      361 gcggatgcag cccgcgcggg gcataggccg ccgttgccac cgcgacgcga cgcgcgcgga
      421 tggtgccgcc gggcgtgcgc aggtgatgga tgccatcctt cagcagccag ccctggaccg
      481 ggctgtcggt atggaccctg gcgcccagtt cacgggccac gcgcagatag ccgaaggcca
      541 gtttggccgc atggatgccg gtgccgtcgg gttcccacat ggcgccatgc gcctcgtggt
      601 cacggacgac ggtgtcatgc agctcgtccc ggcccatcat ccgcgcgcca tagccgaacg
      661 tgtcgttcag cagccgggtt tcgctttcca gtgccggcat cgcggatgcc ttatgcgcga
      721 tgtagtaatg gccgccatcc tgtggctggc aatcgatgcc gtgatcgcgg atcaggccgc
      781 ggaacaggtc aaacgcttcg gtgacctcgg catgcaggcc ctgcgcggta tcaaggcccc
      841 agcgtttgat ccactggctg cgcttcaacc ggcccgaact gatctgcgcc tgcccgccat
      901 tgcgggtgga acagccatag gcaacgccgt tcgcctccag cacggttgcc ttgatgccgt
      961 gcatccgggc caggtggatg gcgcaggaca ggcccgtata gcccgagccg atcaccgcga
     1021 cgtccacgtc catgtccgcc gtgaccgggc cgtcatcctc gggcgccggg cccgccgtgt
     1081 cgatccagta ggtcggcgcg taatcgctgc ccggtcccag cccgcgggcc gtcatcgggt
     1141 cgtagaaggg atcgaagggc accgatcccg cacgtctggc gatcatctgc atgacacggc
     1201 tcacttcgcg gggattgccg ggcgctgctt gcggatcgcc tgtttctcga cgatccggcc
     1261 gccctcgatg cggaacaggt cggcgccctg aacctcggtc cgggtgccgt cggggttggt
     1321 ggcacggaag gtccactggc tgacgccgcg ggtgccgtcc tcggacagga aatggctgtg
     1381 atcggcccat tgcacgtcag gcatcgcgga ccagaccccc tcgaaggccc tggcgatggc
     1441 agccttgcct tcgatcctgt tgccgtattc attctcgccc gcgacggtga agaacacgca
     1501 atcatcggcg aaatgcgtca tcacgccgtc gatgtcgtgg cggttgaagg cgtcgaaggt
     1561 ggccttcagg tcgtcggcgg tcagggcgcg agtggtcgtt gtcataggcg tgttccttgc
     1621 gtcagtagcc catcatccgg ggcagccaca gggcgattcc ggggaagatg gcgatgatga
     1681 agattgcggt gacagaggcg agcgcgaagg gaatggcccg caggctgatc ctttcgatcg
     1741 agaccccgga tatgcccgag gcgatgaaca ggttctcgcc cagcggcggc gtctggaaac
     1801 ccactgacag ggtggcgatc atgacgatgc cgaaatggat cggatcgatc cccatcatgt
     1861 aggcgaccgg cagcatcacc gggaccagga tcatgatcgc ggccagcgtt tccatgaaca
     1921 tgccgatgac cagcaagaga ccgatcacca tggcccagat caggtagagg ttcgtggtca
     1981 gggacaggat cccgcccgcg atgacggcgg gaacgtcgtt ttcgaccagg atccggccga
     2041 agatggtggc ggtgaacagg accagcaaca cgcgcccggc cagccatgtc gtcgtgtcca
     2101 gcgacttgat gacctcgcgc agatccagtt cgcgatagat cgcggcgccg acgaacaagg
     2161 tgtagaa
//
LOCUS       DTVW01000182            2235 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1249215, whole
            genome shotgun sequence.
ACCESSION   DTVW01000182 DTVW01000000
VERSION     DTVW01000182.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2235)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2235)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2235
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1249215"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..142
                     /locus_tag="EYO87_02460"
     CDS             <1..142
                     /locus_tag="EYO87_02460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009502722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HIC64865.1"
                     /translation="EAREIAEGIVFLASGKASFITGQVLAVDGGFDAAGVGLPALRRG
                     EG"
     gene            454..1290
                     /locus_tag="EYO87_02465"
     CDS             454..1290
                     /locus_tag="EYO87_02465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010658089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAA hydrolase family protein"
                     /protein_id="HIC64866.1"
                     /translation="MKFLRYGEAGAERPGLLDRDGRIRDLSDHIDDLRGAVLGDLAAL
                     SGLDPASLPLVEGAPRLGPPVAGTGKMICIGLNYADHAAESGMAVPPEPVIFMKATSA
                     ICGPDDPIVIPRGSEKTDWEVELAVIIGKTAKYVGEAEAMDHVAGFAIANDVSERAFQ
                     AERQGQWTKGKSCDNFGQIGPWLVTPDEVADPQALAMWLKVNGETRQDGSTATMVYKV
                     PFLIHYLSQFMSLHPGDVISTGTPPGVGMGMKPPRYLKAGDVVELGIEGLGSQRQDVV
                     AD"
     gene            1304..>2235
                     /locus_tag="EYO87_02470"
     CDS             1304..>2235
                     /locus_tag="EYO87_02470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019831664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxyacid dehydrogenase"
                     /protein_id="HIC64867.1"
                     /translation="MTPELVQISPLRAIVSERLSEKFVIHRLWEAEDPDALLAQIGPR
                     VRGLLAGGTRIDGSFMDRLPALEIIAAFGVGYDQIDAEAAAGRGVVVTHTPDVLSDEV
                     ADITIALLIGTIRRLPQAQDYLRAGKWAEQGAFPLTASLRGRKVGIFGLGRIGKAIWK
                     RLDAMGLEVAYCGRNRQDLPLDYFDDITELARACDVLILAAPGTEETQGIVDEDVLDA
                     LGRDGFLINIGRGALVNEADLAAALAQGRIAGAGLDVFADEPHPLPALLEAPNTMLLP
                     HVASASDHTRDAMGQLVVDNVTSWFERGRPVTPVP"
BASE COUNT          377 a          690 c          799 g          369 t
ORIGIN      
        1 cgaggcacgc gagatcgccg aggggatcgt gtttctggcc tctggcaagg ccagcttcat
       61 caccgggcag gttctggccg tcgatggcgg tttcgatgcg gcgggggtcg gcctgcccgc
      121 tctgcggcgt ggcgagggct agaaaccggg gcggcaggga ccgcgttgga cagcggacat
      181 cgcgacagga ggatgccatg accaccaacc atgtgccttt cgacattccc gaggatctgc
      241 gccgcgggct ggcggtcgag gccgcgcgtt cgggcaagag ccagtcacgg atcgtggccg
      301 aagcgctgga aaaggccggg atcgaccggg tcagcgccga tgatatggac aagctgatgc
      361 acggatcgca ataggccgcc cggctctggc cccggttcgc gtaatctgca agtttgtccg
      421 gcgacatctg aatgtgccga aggagggcgg acagtgaaat tcttgcgtta tggcgaagcc
      481 ggggccgaac ggcccgggct tctggaccgc gatggccgca tccgcgacct gtcggaccat
      541 atcgacgatc tgcgcggcgc ggtgctgggc gatctggctg cgctttccgg gctggatccg
      601 gcctcgctgc cgctggtcga gggcgcgccc cgcctggggc cgccggtcgc cggcaccggc
      661 aagatgatct gcatcgggct gaactatgcc gatcacgccg ccgaatccgg catggccgtg
      721 ccgcccgagc cggtgatctt catgaaggcc accagcgcca tctgcggccc cgacgatccc
      781 atcgtgatcc cgcgcggcag cgaaaagacc gattgggagg tcgaactggc cgtcatcatc
      841 ggcaagaccg cgaaatatgt cggcgaggcc gaggcgatgg atcacgtcgc aggcttcgca
      901 atcgccaacg acgtgtccga acgcgcgttt caggcggaac gccagggtca gtggaccaag
      961 ggcaagagct gcgacaattt cggacagatc ggcccctggc tggtcactcc ggacgaggtc
     1021 gccgacccgc aggcgctggc catgtggctg aaggtcaatg gcgagacgcg ccaggacgga
     1081 tcgaccgcga ccatggtcta caaggttccg ttcctgatcc attacctcag ccagttcatg
     1141 tcgctgcatc cgggcgacgt gatttcgacc gggactccgc ccggcgtcgg gatggggatg
     1201 aagccgccgc gctatctgaa ggcgggcgat gtggttgaac tgggcatcga ggggctggga
     1261 tcgcagcgcc aggatgtggt ggcggattga aaaggatcgc gacatgacgc cagaacttgt
     1321 gcaaatctcg cccctgcggg ccatcgtttc cgagcggctt tccgaaaaat tcgtgatcca
     1381 ccggttgtgg gaggcggaag accccgatgc gctgctggcc cagatcgggc cgcgcgtgcg
     1441 cggccttctg gcgggcggca cgcggatcga cgggtctttc atggaccgtc tgccggcgct
     1501 ggaaatcatc gccgcgttcg gtgtcggcta cgaccagatc gacgccgagg cggcggccgg
     1561 gcgcggcgtg gtggtgacgc atacccccga cgttctcagc gacgaggtgg ccgatatcac
     1621 cattgctctg ctgatcggca cgatccggcg cctgccgcag gcgcaggatt acctgcgcgc
     1681 cgggaaatgg gcggagcagg gggcctttcc actgaccgcc agcctgcgcg gacgcaaggt
     1741 cggcattttc gggctgggcc ggatcggcaa ggcgatctgg aagcggctgg atgcgatggg
     1801 gctggaagtc gcctattgcg gacgaaaccg ccaggacctg ccgctggatt atttcgacga
     1861 catcaccgaa ctggcccgtg cctgcgatgt cctgatcctg gccgcgccgg gaaccgagga
     1921 gacgcaggga atcgtcgatg aggatgttct ggacgccttg ggccgcgacg ggtttctgat
     1981 caatatcggc cggggcgccc tggtgaacga ggccgatctg gcggcggcgc tggcccaggg
     2041 ccggatcgcc ggggccgggc tggacgtctt cgccgacgaa ccgcacccgc tgccggcact
     2101 gctggaggcg cccaacacca tgttgctgcc gcatgtcgcc tcggcctcgg accatacgcg
     2161 cgacgcgatg gggcaattgg tcgtggacaa cgtgacaagc tggttcgaac gcggccgtcc
     2221 ggtcacgccg gtccc
//
LOCUS       DTVW01000183            1507 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1249435, whole
            genome shotgun sequence.
ACCESSION   DTVW01000183 DTVW01000000
VERSION     DTVW01000183.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1507)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1507)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1507
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1249435"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..536
                     /gene="pyrB"
                     /locus_tag="EYO87_02475"
     CDS             <1..536
                     /gene="pyrB"
                     /locus_tag="EYO87_02475"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011907288.1"
                     /note="catalyzes the transfer of the carbamoyl moiety from
                     carbamoyl phosphate to L- aspartate in pyrimidine
                     biosynthesis; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="aspartate carbamoyltransferase catalytic
                     subunit"
                     /protein_id="HIC64868.1"
                     /translation="ALTIRRAKGRLHRLSVAICGDIAHSRVARSNLILLGKMENRIRL
                     IGPATLMPAGVGEMGVEVFEDMREGLRGADVVMMLRLQRERMDGGFIPSEREYYHRWG
                     LDAEKLALAAPDAIVMHPGPMNRGVEIDGTIADDINRSVIQDQVEMGVAVRMAALDLL
                     ARNLRAERGAAAAGVMV"
     gene            533..>1507
                     /locus_tag="EYO87_02480"
     CDS             533..>1507
                     /locus_tag="EYO87_02480"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_354087.1"
                     /note="Catalyzes the reversible hydrolysis of the amide
                     bond within dihydroorotate. This metabolic intermediate is
                     required for the biosynthesis of pyrimidine nucleotides;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HIC64869.1"
                     /translation="MTAILFSNARLIDPEAGTDGPGSLLVGDGRIGGRGAPDEAAPEG
                     AEIVDCGGRVLAPGLIDWGVKIGEPGERHKESFRSAGLAAATGGVTTIIARPDTAPPI
                     DTPESLEFVTRRAADAKVNIRHMAALTKQRAGREMVEIGFLSDLGAAAFTDGVRVVSD
                     SKLLSRCMAYARGTGALIVGHPQDAGLSKGAAATSGKFASLYGIPAVSPMAEVMGLDR
                     DLALVAMTGCRWHADQVTLAAALPALRRARAAGLDVTAGISIHHLTLNEFDVGDYRTF
                     FRFTPPLRSEDDREAMVQAVAEGVIDVIASFHTPQDEESKRLPFEAAAP"
BASE COUNT          235 a          508 c          546 g          218 t
ORIGIN      
        1 acgcgctgac gatccgccgc gccaagggcc ggctgcaccg cctgagcgtg gccatctgcg
       61 gcgacatcgc ccacagccgc gtggcacgat ccaacctgat cctgctgggc aagatggaaa
      121 accgcatccg cctgatcggg ccggcgacgc tgatgcccgc gggcgtgggc gagatgggcg
      181 tcgaggtctt cgaggacatg cgcgaggggc tgcgcggcgc cgatgtggtg atgatgctgc
      241 ggttgcagcg cgaacggatg gatggcggct tcattccgtc cgaacgcgaa tattaccacc
      301 gctggggcct ggatgccgaa aagctggcac tggccgcgcc cgacgccatc gtcatgcatc
      361 ccggcccgat gaaccggggc gtcgagatcg acggcaccat cgccgacgac atcaaccgct
      421 cggtcatcca ggaccaggtc gagatgggcg tggcggtgcg gatggcggcg ctggatctgc
      481 tggcgcggaa cctgcgcgcc gaacggggcg cggcggcagc aggggtgatg gtgtgaccgc
      541 gatcctgttc agcaatgccc gcctgatcga ccccgaggcc gggacggacg ggcccggatc
      601 gctgctggtc ggcgatggcc ggatcggggg ccgcggcgcg ccggacgagg ccgcgcccga
      661 aggggcggag atcgtcgatt gcggcggaag ggtcctggca cccggcctga tcgactgggg
      721 cgtcaagatc ggcgagccgg gcgaacggca caaggaaagc ttccgcagcg cgggccttgc
      781 cgccgctacc gggggcgtga ccacgatcat agcgcggccc gataccgcgc cgcccatcga
      841 cacgcccgaa tcgctggaat tcgtgacccg ccgcgccgcc gatgcgaagg tcaacatccg
      901 ccacatggcc gcgctgacca agcagcgcgc aggccgcgaa atggtcgaga tcgggtttct
      961 gagcgatctg ggcgcggcgg cctttaccga tggcgtgcgc gtggtcagcg acagcaagct
     1021 gctgtcgcgc tgcatggcct atgcccgcgg caccggggcg ctgatcgtgg gccatccgca
     1081 ggatgccggg ctgtcgaagg gcgcggccgc gaccagcggc aagttcgcct cgctttacgg
     1141 cattcccgcc gtctcgccca tggccgaggt gatggggctg gatcgcgatc tggcgctggt
     1201 cgccatgacc ggctgccgct ggcacgccga tcaggtcacg cttgccgccg ccctgcccgc
     1261 cctgcggcgc gcgcgggcgg cggggctgga cgtgaccgcg ggcatttcca tccaccacct
     1321 gacgctgaac gaattcgatg tcggcgatta tcgcaccttc ttccgcttca ccccgccgct
     1381 gcgctccgag gatgaccgcg aagcgatggt tcaggccgtg gccgaagggg tgatcgacgt
     1441 gatcgccagc tttcacaccc cgcaggacga ggaatccaag cgcctgccct tcgaggcggc
     1501 ggccccc
//
LOCUS       DTVW01000184            1487 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1250134, whole
            genome shotgun sequence.
ACCESSION   DTVW01000184 DTVW01000000
VERSION     DTVW01000184.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1487)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1487)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1487
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1250134"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(241..1017)
                     /locus_tag="EYO87_02485"
                     /pseudo
     CDS             complement(241..1017)
                     /locus_tag="EYO87_02485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999122.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta"
     gene            complement(1014..1487)
                     /locus_tag="EYO87_02490"
     CDS             complement(1014..1487)
                     /locus_tag="EYO87_02490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010391970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64870.1"
                     /translation="MSRRAALLGLLAVSACGLTPVYGPNGAGRRLFGKIRPRDPETYQ
                     DFIFNRRLAERLGGEGDLYDLDYGIAIGVVPQAITPDEVTTRYSLSGTADFALKDQAG
                     RVLAQGRVSSFTSYSTTGTTIATLSAEGDARQRLATMLADQVVTRLLAASASLPE"
BASE COUNT          249 a          531 c          484 g          223 t
ORIGIN      
        1 atgcgctgtc actgggaccg tatgcgcgag acccgaactt tcagcggcgc tcccagcgac
       61 gccggcccat ttgatacggc ccagctaaca agagccttcg agcttgatcg ggatcaggcc
      121 gaaagggacc cggatcagcg cacatgtagc caggcacctg ctacccgaaa cgcttcttcg
      181 gtgcagtgga atgactgtga tacttgatcg gcgctacccg tcggagttcc acctctcagg
      241 cgccctgaaa tggcgcaggg cggcgatggc cagcgagacg ggcgtgacgc cctgcccctc
      301 gatccgccgc atcaaggcgc cgaaacgatc cgatcgtccc tcggccacga cgtgcagcaa
      361 ttcgtccaga tcggcctcga tggtcgcggg cgccatcagc gccacctcgg ccggcgtcag
      421 gggcgtatca tcgccatatt tgtaaagccc gatcttttcg atcgtctggc gcagatcgcc
      481 gggatccagg gcccgcgcaa gcgccgtcag atcgcgcatc gcctcgcgcg acacttcgcc
      541 gaggcccgac gcggccagcc agcgcgcgat ctcgtcctcg ccggggggat cgtcgtagac
      601 cggggccgcg accgcctgcc catgcggctc gaacagcttg cgcagggccg aggatttggc
      661 caatcccccg gccgtcacca cgatcaccgc gtcaccgggc tgccattcac caagcgccgc
      721 cgccaccgcc tcggcggccg tatcgggcgt atcctcgacc agaacgacgc gggggccggg
      781 aaagaagccg accgccttga cggcgtccag cagcgcggcc ggatccttct tcagcccgcc
      841 acccgccagc cgggtcaggc gcatttcctc gtcggccttc tctccggtca gcgcggccac
      901 cgcctcggtc cgcttcagcg atacgcgcat cgcgtcctgg ccatagatca gcagggccgg
      961 gcgcgaaggg tcgggccgcg ccagatagcg ggcgatctct ccgcccttaa ggttcattcc
     1021 ggcagcgaag cggacgccgc cagcagccgc gtgaccacct gatcggccag catcgtggcc
     1081 agccgctgcc gggcatcacc ctcggccgac agcgtggcga tggtcgtgcc ggtggtggaa
     1141 tacgaggtaa agctgctgac ccgcccttgc gcaaggacgc ggcccgcctg gtccttcagg
     1201 gcgaaatcgg cggtgccgct cagcgaatag cgcgttgtca cctcgtcggg cgtgatcgcc
     1261 tgcgggacga cgccgatcgc gatgccgtaa tccagatcgt agagatcgcc ctcgccgccc
     1321 agacgttcgg ccaggcggcg gttgaagata aagtcctggt aggtttccgg atcgcgcggg
     1381 cggatcttgc cgaaaaggcg gcgccccgcc ccgttcgggc catagacagg cgtcagcccg
     1441 caggccgaga cggccagcag gcccagcagg gccgcgcggc gcgacag
//
LOCUS       DTVW01000185            1093 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1251009, whole
            genome shotgun sequence.
ACCESSION   DTVW01000185 DTVW01000000
VERSION     DTVW01000185.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1093)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1093)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1093
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1251009"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>1093
                     /locus_tag="EYO87_02495"
     CDS             <1..>1093
                     /locus_tag="EYO87_02495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012875590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase RecG"
                     /protein_id="HIC64871.1"
                     /translation="HFNGLSKFLEPYKITIAILTRSAHKRTSQKIKYAPFKISKTRVA
                     KETGEGKIDIIIGTHAIIQETVRFKNLGLIVIDEQHRFGVEQRARLLRGKSAIPHLLS
                     MTATPIPRTLSLAIFGDLDLSLITQMPRGRKKIITKIVAPAGRTQAYEFIRNQINEGR
                     QAFVICPLVEESEKIEGKAAKKEQEKLQKEIFPDLKISLLHGKMKGKEKEKVMQTFKD
                     READILVSTSVVEVGIDIPNATVMLIEGADRFGLAQLYQFRGRVGRGEHQSYCFLFTD
                     STAKTTRQRLKALITAKNSFELAEEDLKIRGPGDFIGSRQSGMPSFAMASLSDLEFVK
                     SVRKEVESVLLKDPDLTSNSLLREKYENFR"
BASE COUNT          333 a          276 c          256 g          228 t
ORIGIN      
        1 cactttaacg ggctttcaaa atttttagag ccctacaaga taacaattgc gatactcacg
       61 cgaagcgccc acaaaagaac atcgcaaaaa ataaaatacg ctccgtttaa aatatcaaaa
      121 acgcgcgtgg caaaagaaac gggcgaaggt aaaattgata ttataatcgg cacgcacgcg
      181 ataattcaag agacggtccg cttcaaaaat cttggactta tcgtaattga tgaacagcat
      241 cgtttcgggg tcgagcaacg cgcccgtctt ctgcgcggga agtcggcgat cccccatttg
      301 ttaagcatga ccgcaacccc aatcccccgc accctttccc ttgcgatatt cggggatctc
      361 gacctttcgc tcatcacgca aatgcccagg ggcagaaaga agatcatcac aaaaatcgtg
      421 gcacccgccg gacggacgca ggcatatgaa tttataagga atcaaataaa cgaagggcgg
      481 caggcgtttg tgatatgccc gcttgtcgaa gagtcggaaa aaattgaagg aaaagcggca
      541 aaaaaagagc aggaaaaact tcagaaagaa atattcccgg atcttaaaat ttccctgctt
      601 cacggcaaaa tgaaaggcaa ggaaaaggaa aaagtcatgc agacgtttaa ggatagagag
      661 gcggacattt tggtttcaac atctgtggtt gaggtcggga ttgatattcc aaacgcgaca
      721 gtcatgctca tcgaaggggc ggaccgcttc ggccttgccc agctctatca atttcgcgga
      781 cgagtaggcc gtggcgagca ccagtcctat tgctttcttt ttacggactc cactgcaaag
      841 acaacccgtc agcggctaaa ggccctgata accgcgaaga acagctttga gctcgcggaa
      901 gaagacctca agattcgcgg ccccggcgac ttcatcggtt cccgccaatc gggcatgccc
      961 tccttcgcca tggcatccct ctctgacctt gaatttgtaa aatcagtccg aaaagaagtg
     1021 gaaagcgtac tcttaaaaga cccggacctc acatccaatt cgctattgcg cgaaaaatac
     1081 gaaaatttcc gca
//
LOCUS       DTVW01000186            4121 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1252051, whole
            genome shotgun sequence.
ACCESSION   DTVW01000186 DTVW01000000
VERSION     DTVW01000186.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 4121)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4121)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4121
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1252051"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..537
                     /locus_tag="EYO87_02500"
     CDS             <1..537
                     /locus_tag="EYO87_02500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011453079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar transferase"
                     /protein_id="HIC64872.1"
                     /translation="LPLMLLMAGLVALDGHNPFFAQKRIGRNGRVFRIWKLRSMVVDA
                     ESRLQAHLDDHPGDRAQWARTQKLKHDPRITPVGRLLRKTSLDELPQLLNVLAGSMAL
                     VGPRPMMVGQRHLYRGKSYYRLRPGITGLWQISARNESEFAARVRYDAAYERHLSGRL
                     DLWILVRTVGVVLRGTGY"
     gene            601..3213
                     /locus_tag="EYO87_02505"
     CDS             601..3213
                     /locus_tag="EYO87_02505"
                     /inference="COORDINATES: protein
                     motif:HMM:PF13432.4,HMM:PF14559.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HIC64873.1"
                     /translation="MFMIAKDLSRSDRTGRRTWRLILPAALAMGLALPLAGCKSPAEK
                     AAEYYQSGLDLVAAGDLDRAIVQFRNVFDIEGNHYEARKALAEALASKGDASGAYSQY
                     LRLAEQYPDDLPTRITLARMAFEGRNLDEFSRHATRAVELAPDDPDARVLGLAMRYQK
                     ADETGDETARKALADEADSLLKDRPEDVLLLGIALDQAGRTNDMDRAGTLVRKLLELQ
                     PDNRLRYRQQLALLMEKGDMAGVEAQLRATIENFPDDPEAKTDLIRFYLSRNQPDRAE
                     DFLRGLADAAPAGDPVPRTDLIRFVQLQRGEEAARAEADKALAAGGDPLIFGVLKAGF
                     DFNAGQREAAISQIRALLEGVEPSDRTRDVRTQLARMLIQTGDVETAKTEVDAVLAQN
                     PGHPDALKLKAGWQITADQTDAALLALRNVLDQKPEDAEAMGLMADAYLRVGETDLAR
                     DYLAQAADASGNAPAQTLRLAQMLANEGRWRPAEDAILPALKLDPQNLPLLALLGRVY
                     LEMPDLPRAGGVIEQLRGIDSPEARVAADELDLNRIAATDGREAAVTYLEGLARNSDA
                     GLGAKLGLLRARLAAGDAGAARELATELVAANPDDAGMRMVQAMTEAAAGDPETARAG
                     LDALIADNPQDPRPYLALMRLVSQQGDAQAARAVMDRGLSALPDNPDLLWAKAGVLER
                     AGDIDGAIAIYEGLYRQNSDSIVTANNLASLLATWKPDDAEAVARASVVSRRLKDTDV
                     PPFMDTYGWVQHLNGDSEGALPYLEGASAGLPDDPMVQIHLGLVQEALGRTEEARAQL
                     RKGLDMLPPDRSDKAIADARAVLARLEAAPAADAARGTGQSAGTGDTAGDTAGDAAGE
                     VTGDAGGFVSGQNP"
     gene            3452..4072
                     /locus_tag="EYO87_02510"
     CDS             3452..4072
                     /locus_tag="EYO87_02510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008886572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide export protein"
                     /protein_id="HIC64874.1"
                     /translation="MKTLLRVMLALVLAVTFAALRPDLSGQAQAQEYRIRAGDRLTVE
                     VLEDNSLNRTVAVLPGGTINFPYAGSLNVAGSTPSTVGNRIAQALSGVLAAPPTVFVT
                     AVPQEPLPMAEAEKEVVNIYVMGEASAPGAKAVLPGTTFLQALSQAGGLSPFAATKRI
                     QLRRARTPGQVIVVDYDAIMRGAVMNYDPVLSEGDVIVVPERRLFE"
BASE COUNT          678 a         1399 c         1434 g          610 t
ORIGIN      
        1 ctgccgctga tgctgctgat ggcggggctg gtggcgctgg acgggcataa tccctttttc
       61 gcgcagaagc gcatcggccg gaacggccgc gtctttcgca tctggaagct gcgcagcatg
      121 gtcgtggacg ccgaatcccg gcttcaggcg catctggacg accatcccgg cgaccgcgcg
      181 caatgggccc gcacccagaa gctgaaacac gatccgcgca tcaccccggt cggccggctg
      241 ctgcgcaaga cctcgctgga cgaattgccg caattgctga acgtgctggc gggcagcatg
      301 gcgctggtcg gtccgcggcc gatgatggtg ggccagcgtc atctgtatcg cggcaaaagc
      361 tattaccggc tgcgcccggg aatcacgggt ttatggcaaa tttcagcaag aaatgaatcg
      421 gaattcgcgg cccgcgtgcg ctatgatgcg gcctatgagc gccacctgtc gggccgcctg
      481 gatctgtgga tcctggtccg gacggtcggt gtcgttctgc gcggcaccgg ctattgacgc
      541 gccccaacct gcacccggcc ggcggatcgc ccggaaaacc gggcttccat aaacgatgag
      601 atgttcatga ttgccaaaga cctttcccgt tccgaccgca ccggccgcag gacgtggcgc
      661 ctgatcctgc ccgccgccct ggcgatgggc ctggccctgc cgctggccgg atgcaaatcc
      721 cccgccgaga aggcggccga atattaccag tccggtctcg acctggtggc cgcaggcgat
      781 ctggaccgcg ccatcgtgca gttccgcaac gtcttcgaca tcgagggcaa tcactacgag
      841 gcccgcaagg ccctggccga agccctggca agcaagggcg atgccagcgg cgcctacagc
      901 cagtatctgc gcctggccga acaatatccc gacgatctgc cgacccggat cacgctggcg
      961 cggatggcct tcgagggccg caatctggat gaattcagcc gccatgcgac ccgcgccgtc
     1021 gaactggccc ccgacgatcc cgatgcccgt gtcctcggcc tggcgatgcg ttaccagaag
     1081 gccgacgaga ccggggacga gaccgcccgc aaggccctgg ccgacgaggc cgacagcctg
     1141 ctgaaggatc gtccggagga tgtgctgctg cttggcatcg cgctggatca ggccggacgg
     1201 accaatgaca tggaccgggc cgggacgctg gtccggaagc tgctggaatt gcagcccgac
     1261 aaccgtctgc gctatcgcca gcagctggcg ctgctgatgg aaaagggcga catggcgggc
     1321 gtcgaggccc agcttcgcgc cacgatcgag aatttccccg acgatcccga ggccaagacc
     1381 gatctgatcc gcttctacct gtcgcgaaac cagcccgacc gggccgagga tttcctgcgc
     1441 gggctggccg atgcggcgcc ggccggcgat ccggtgccgc ggaccgacct gatccgcttc
     1501 gtccagcttc agcgcggcga agaggccgcg cgggccgagg cggacaaggc cctggcggcg
     1561 ggcggcgatc cgctgatctt cggtgtgctg aaggccggct tcgacttcaa tgccggtcag
     1621 cgcgaggcgg cgatctcgca gatccgcgcg ctgctggaag gtgtcgagcc cagcgaccgg
     1681 acccgcgatg tcaggacgca gctggcgcgg atgctgatcc agaccggcga tgtggaaacc
     1741 gcgaaaaccg aggtcgatgc ggtcctggcc cagaatcccg gccatcccga cgcgctgaag
     1801 ctgaaggccg gctggcagat cacggccgac cagaccgacg cggcgctgct ggccctgcgc
     1861 aacgtgctgg accagaagcc cgaggatgcc gaggcgatgg ggctgatggc cgatgcctat
     1921 ctgcgcgtgg gcgagaccga tctggcgcgc gattacctgg cccaggcggc cgacgcctcg
     1981 ggcaatgcgc cggcgcagac cttgcggctg gcgcagatgc tggccaatga gggtcgctgg
     2041 cgcccggccg aggatgcgat cctgccggcg ctgaagctgg atccgcagaa tctgcccctg
     2101 cttgccctgc tgggccgggt ctatctggaa atgcccgacc tgccgcgcgc cggcggcgtg
     2161 atcgaacaat tgcgcgggat cgacagcccc gaggcccgcg tggccgccga cgagctggac
     2221 ctgaaccgga tcgccgccac cgatggccgg gaggccgccg tgacctatct cgaggggctg
     2281 gcccggaaca gcgatgccgg gctgggggcg aagctgggcc tgctgcgggc gcgtctggcc
     2341 gcgggcgatg cgggggccgc gcgcgaactg gccaccgaac tggtggccgc caatccggac
     2401 gatgccggca tgcgcatggt ccaggccatg accgaggccg ccgcgggcga tcccgaaacc
     2461 gcccgtgccg ggctggacgc attgatcgcc gacaatccgc aggatccgcg cccctatctg
     2521 gcgctgatgc ggcttgtcag ccagcagggc gatgcccagg ccgcccgcgc agtgatggat
     2581 cgcggcctct cggccctgcc cgacaatccc gacctcctgt gggccaaggc gggcgttctg
     2641 gaacgcgcgg gcgatatcga cggcgccatc gccatctacg aggggctcta ccggcagaat
     2701 tcggattcca tcgtgacggc caacaacctg gccagcctgc tggcgacctg gaagcccgac
     2761 gatgccgagg cggtcgcccg cgcctcggtc gtgtcgcggc ggctgaagga taccgatgtg
     2821 ccgcccttca tggataccta tggctgggtc cagcatctga acggcgacag cgaaggcgcc
     2881 ctgccctatc tggaaggcgc cagcgcgggc ctgccggacg atccgatggt gcagatccat
     2941 ctgggcctgg tgcaggaggc gcttggccgg accgaagagg ccagggcaca gctgcgcaag
     3001 ggcctggaca tgctgccgcc cgaccgcagc gacaaggcca tcgccgatgc ccgcgccgtg
     3061 ctggcccggc tggaagccgc gccggccgcc gatgcggccc gggggaccgg gcaatccgcc
     3121 gggaccgggg acacggccgg ggataccgcc ggggacgctg ccggagaagt gacgggggat
     3181 gcgggcgggt tcgtctcggg acagaatccc tgacccgctt gcgggcgccc cgccatggcc
     3241 accaccgcgc cgaaaatggt ggccatggcc gcgccggagg cggcgcatat gtggtcgggg
     3301 ggcgacacct tgcctcccga aaggcggctt tttgccttcc gggcttaacg gaatggcaag
     3361 ggccatgtca taatcctgaa accggcacga cggatcggat gggcgccgcg cccggatccc
     3421 ttcttgtgcc gacatgagtg agggacacaa gatgaagacc ctgttgcgcg tgatgctggc
     3481 ccttgtgctg gcggtgacct ttgcggcgct gcgcccggat ctgtccggcc aggcccaggc
     3541 gcaggaatac cggatccgcg cgggcgaccg gctgacggtc gaggtgctgg aagacaattc
     3601 cctgaaccgc accgtggcgg tgctgcccgg cggcaccatc aactttccct atgccggcag
     3661 cctgaacgtc gcgggatcga ccccgtccac cgtgggcaat cgcatcgccc aggccctgtc
     3721 gggcgtgctg gccgcgccgc cgaccgtctt cgtgaccgcc gtgccgcagg aaccgctgcc
     3781 catggccgag gccgaaaagg aggtcgtcaa catctatgtc atgggcgagg cctcggcccc
     3841 cggcgccaag gcggtgctgc ccggcacgac cttcctgcag gcgctgtcgc aggccggcgg
     3901 gctgtcgccc tttgccgcca ccaaacggat ccagctgcgc cgcgcccgca cgcccggaca
     3961 ggtgatcgtg gtcgattacg acgccatcat gcgcggcgcg gtgatgaatt acgatccggt
     4021 cctgtccgaa ggcgacgtga tcgtcgtgcc cgaaaggcgg cttttcgaat gaagccacgg
     4081 cacggcacgg cacgacccgg cctgatccgc agcgccgcgc c
//
LOCUS       DTVW01000187            1232 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1253461, whole
            genome shotgun sequence.
ACCESSION   DTVW01000187 DTVW01000000
VERSION     DTVW01000187.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1232)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1232)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1232
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1253461"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..710)
                     /locus_tag="EYO87_02515"
     CDS             complement(<1..710)
                     /locus_tag="EYO87_02515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006311156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HIC64875.1"
                     /translation="MSALVSIILPARDEAGSITQVVTGIAEVMAGTPHEVVVVDDAST
                     DNTRAVLRELAGRMPQLLVMCHDRPCGQSAAIRTGVLAASGSLVATLDADGQNPPANL
                     PGLLAPLLTDPARGRIGLVQGQRVDRRDTWSKRWASHAANRIRGGLLRDGVSDSGCGL
                     KAFPRKVYMDLPFFDHIHRFMPAMVRREGWEVVVVPVTHAERRSGRSKYGNLQRALVG
                     AVDLLGAAWLIRRRKLPVA"
BASE COUNT          209 a          437 c          429 g          157 t
ORIGIN      
        1 gccaccggca gcttgcggcg gcgaatcagc catgccgccc ccagcagatc gaccgccccg
       61 accagggcgc gctgaagatt gccgtatttc gaccggccgc tgcgtcgttc ggcatgggtg
      121 acgggcacca ccacgacctc ccatccctcg cggcggacca tggcgggcat gaagcggtgg
      181 atgtggtcga aaaagggcag gtccatatag accttgcgcg gaaaggcctt caggccgcag
      241 ccgctgtcgc tgaccccgtc tcgcagcagg ccgccccgga tccggttcgc cgcatgcgag
      301 gcccatcgtt tcgaccaggt gtcgcgccgg tccacccgct ggccctggac cagaccgatg
      361 cgcccccgcg ccggatccgt cagcagcggc gccagcaggc ccggcaggtt cgcgggcggg
      421 ttctgaccat ccgcgtccag cgtcgcgaca aggctgccgc tggcggccag gacgccggtc
      481 cggatcgccg cggactggcc gcaggggcga tcatggcaca tcaccagcaa ttgcggcata
      541 cgaccggcca gttcccgcag caccgcccgc gtgttgtcgg tcgaggcatc atccaccacc
      601 acgacctcgt ggggggtgcc ggccatcacc tcggcgatcc cggtcacgac ctgggtgatg
      661 ctgcccgcct cgtcccgggc gggcaggatg atggatacca gtgcgctcat cgaacagcct
      721 tgtcgggccg gaacagcgta taggtatcgc tgcgataggg gaagcgcgcg accggccggg
      781 ttcccggcgg cggcaccgga tcgaggctca gaagaatgcc gtcgggatgg ccggcaatcc
      841 agtcggccgc ggcctgcgga tcggtgacct gcgcgacggg ttggcgcagt ctggcggcaa
      901 agttgaactg ggcgtgatag cgcccgtcgg taatcgcgat accggtcgcg tcatagggct
      961 ggatcgcgcg ggcgatggcg ttgacgtcat accgcgcgaa cagcagcggc tgggccgcga
     1021 aatgcagccc cagcatggcc gatagcggca gggccgccag cgccaccagc ccggcccgca
     1081 ggcgcaggaa ccccgcgatg ccgatggcgg cgacgaccag ccccagcccc gccgcccaaa
     1141 gcggaatccg gaagggcaag gcccgcagcg cgggcaactg acccgacgcc gccacgacga
     1201 tcagcagcat cagcgcgaag accggcagcg cc
//
LOCUS       DTVW01000188            1118 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1254477, whole
            genome shotgun sequence.
ACCESSION   DTVW01000188 DTVW01000000
VERSION     DTVW01000188.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1118)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1118)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1118
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1254477"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..836
                     /locus_tag="EYO87_02520"
     CDS             <1..836
                     /locus_tag="EYO87_02520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018000826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit N"
                     /protein_id="HIC64876.1"
                     /translation="APTPVTAFFATAPKIAAMALIARLMFGAFGNVPGDWGQIIAALA
                     VMSMFLGSIAGIGQRNIKRLMAYSSIAHMGFALVGLAAGTAYGVQAMLIYMAIYAVMN
                     VGTFAFILSMEREGRPVVMLDSLNRFAATEPLKAFAVLFLMFSLAGVPPFLGFFAKYG
                     VLSAAVQSGMSWLAVAGVVASVIGAFYYLRIVYYMFFGAENEGVESRMGLVQFTALVV
                     PAAMLLLGAVTMLGVDNAAATAAQSLVGTEVTDPGVGEGGPVVSGEGPADPTPTEPAG
                     D"
     gene            844..>1118
                     /locus_tag="EYO87_02525"
     CDS             844..>1118
                     /locus_tag="EYO87_02525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010392896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin--[acetyl-CoA-carboxylase] ligase"
                     /protein_id="HIC64877.1"
                     /translation="MPSAWPRDVARHVLDRVDSTNAEAMRLADRIAGPAWIMARRQEA
                     GRGRRGRAWTDPPGNFAATLLIRPQGGPADAARLSFVAALAVHDALMT"
BASE COUNT          152 a          353 c          402 g          211 t
ORIGIN      
        1 gcgcgccgac gccggtgacg gccttcttcg ccaccgcgcc caagatcgcc gccatggcgc
       61 tgatcgcccg gctgatgttc ggcgccttcg gcaacgtccc cggcgattgg ggccagatca
      121 tcgccgcgct ggcggtgatg tcgatgttcc tgggttcgat cgccgggatc ggacagcgca
      181 acatcaagcg gctgatggcc tattcctcga tcgcgcatat gggctttgcg ctggtcgggc
      241 tggcggccgg aaccgcctat ggcgtgcagg cgatgctgat ctacatggcg atctatgcgg
      301 tgatgaacgt gggcaccttc gccttcatcc tgtcgatgga gcgcgagggc cgtccggtcg
      361 tgatgctgga cagcctgaac cgtttcgccg cgaccgagcc gctcaaggcc ttcgcggtgc
      421 tgttcctgat gttcagcctt gccggcgtgc cgccgtttct gggtttcttc gccaaatacg
      481 gagttctttc ggcggcggtg caatcgggga tgagctggct ggccgtcgcg ggcgtcgtcg
      541 cctcggtgat cggggcgttc tattacctgc gcatcgtcta ttacatgttc ttcggggccg
      601 aaaacgaggg cgtggaaagc cgcatggggc tggtgcagtt cacggcgctg gtcgtgcctg
      661 ccgcaatgct gctgctgggc gcggtgacga tgctgggcgt ggacaatgct gccgccaccg
      721 ccgcgcaatc gctggtcggg accgaggtga ccgatcccgg cgtcggcgag ggggggccgg
      781 tcgtgtccgg cgaagggccg gccgatccga caccaaccga gcctgcgggt gactgacgtc
      841 atcattccct ccgcatggcc aagggacgtg gcccggcatg ttctggaccg cgttgacagc
      901 accaatgccg aagcgatgcg gcttgcggac cggatcgccg gtccggcctg gatcatggcg
      961 cgtcggcaag aggccgggcg cggcaggcgg ggcagggcct ggaccgaccc tccgggaaat
     1021 ttcgcggcaa ccctgctgat ccggccccag ggcgggcccg cggacgccgc gcgactgtcc
     1081 tttgtcgcgg ccctggcggt gcatgatgcg ctgatgac
//
LOCUS       DTVW01000189            1074 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1255868, whole
            genome shotgun sequence.
ACCESSION   DTVW01000189 DTVW01000000
VERSION     DTVW01000189.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1074)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1074)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1074
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1255868"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(17..>1074)
                     /locus_tag="EYO87_02530"
     CDS             complement(17..>1074)
                     /locus_tag="EYO87_02530"
                     /inference="COORDINATES: protein motif:HMM:PF02687.19"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HIC64878.1"
                     /translation="AIAIFNLTYNGQTRVDALLTNGADVTVTGSTSTPVEPVVTKVAA
                     LPGVAATVPMQHRFAYVGNDLQDIYGIDPATITDATSIVDAYFANRDAAATLKALAAT
                     PDGVLVSQETVNDFQLALGDTVNLRLQDATTHQYKAIPFTFVGVALEFPTAPKDSFLV
                     ANAAYIAAQTGTPGHEVLLIRGKTDPGTLAADIRNTLGPASGYKVSDLQSAFHIIASS
                     LTAVDLGRLTNVEIAFAVLLLAAATGMLLYLGFAERRRAAAILSALGASGSEVAGFLW
                     SEALIILVPGAVIGAAIGVAAADMLVKLLSGIFDPPPDALSYPVTALAGFVIVSILAT
                     FAAVRIARHRLSRTRVG"
BASE COUNT          198 a          332 c          383 g          161 t
ORIGIN      
        1 atcgccagcg ccgggtctac ccgacacggg tccgcgacag ccggtgccgc gcgatgcgga
       61 cggcggcgaa tgtggcaagg atgctgacga tgacgaaccc ggccagggcc gtcacgggat
      121 aggacagggc atcgggcggc ggatcgaaga tgcccgacag aagcttgacc agcatgtcgg
      181 ccgcggcgac gccgatcgcc gcgccgatga cggcgccggg aacgaggatg atcagcgcct
      241 cgctccacag aaatcccgcg acctcggatc ccgacgcgcc gagcgccgag agaatggccg
      301 ccgcccggcg acgctcggca aagcccagat acagcagcat tcccgtcgcc gccgccagca
      361 gcaggaccgc gaaggcgatc tcgacattgg tcagccggcc aagatcgacg gcggtcaggc
      421 tggaggcgat gatgtggaac gcggattgaa gatccgagac cttgtagccc gaggccggcc
      481 ccagggtgtt gcggatatcg gcggccagcg ttccgggatc ggtcttgccc cggatcagca
      541 gaacctcgtg gccgggggtg ccggtctgcg cggcgatgta ggccgcgttg gcgaccagaa
      601 aggaatcctt gggtgcggtc ggaaattcca gcgcgacgcc cacgaaggtg aacggaatcg
      661 ccttgtattg gtgggtggtg gcatcctgaa gccgcaggtt cacggtatcg ccaagcgcga
      721 gctgaaaatc gttcacggtt tcctgcgaca ccagaacgcc gtccggtgtc gcggccagcg
      781 ccttcagcgt ggccgccgca tcgcgattgg cgaaataggc gtcgacgatc gacgtggcat
      841 ctgtgatcgt ggcggggtcg atgccgtaga tgtcctgcag gtcgttgccg acataggcga
      901 agcgatgctg catcggcacg gtcgccgcga cgccgggaag ggccgcgacc tttgtcacca
      961 ccggctcgac cggcgtcgag gtcgatccgg tcaccgtcac atccgccccg ttggtcagca
     1021 gggcatcgac ccgggtctgg ccgttatagg tgaggttgaa gatcgcgatg gcga
//
LOCUS       DTVW01000190            2146 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1256846, whole
            genome shotgun sequence.
ACCESSION   DTVW01000190 DTVW01000000
VERSION     DTVW01000190.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2146)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2146)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2146
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1256846"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..334)
                     /locus_tag="EYO87_02535"
     CDS             complement(<1..334)
                     /locus_tag="EYO87_02535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010395289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HIC64879.1"
                     /translation="MTKNGISYRDAGVDIDAGNALVDRIKPAAAATARAGVMDALGGF
                     GALFDPAAAGYDDPVLVAATDGVGTKLRIAIDTGHLDAIGQDLVAMCVNDLVCQGAEP
                     LFFLDYFAT"
     gene            450..526
                     /locus_tag="EYO87_02540"
     tRNA            450..526
                     /locus_tag="EYO87_02540"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:1.23"
                     /anticodon=(pos:484..486,aa:Met,seq:cat)
     gene            732..1106
                     /locus_tag="EYO87_02545"
     CDS             732..1106
                     /locus_tag="EYO87_02545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009805362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HIC64880.1"
                     /translation="MHDDSDLIDHIHLRLSDFDRGVSFYVAILNALGRGADIRRGRDW
                     LEIGPLYLDQSDNITPPSRLHLCFRARSREEVAAFHSAGLAAGGRDNGAPGLRDYHPG
                     YYAAFLLDPDGNNIEAKLDEQT"
     gene            complement(1103..>2146)
                     /gene="aroA"
                     /locus_tag="EYO87_02550"
     CDS             complement(1103..>2146)
                     /gene="aroA"
                     /locus_tag="EYO87_02550"
                     /EC_number="2.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010392892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoshikimate 1-carboxyvinyltransferase"
                     /protein_id="HIC64881.1"
                     /translation="CGNSGTGVRLIMGAMATTPITATFTGDASLSRRPMARVTDPLSA
                     FGAQITAREGGRLPITIQGAADPVPLRYRTPVASAQIKSAILLAGLNSPGETVVIEAE
                     PTRDHSERMLAGFGAQIRTETTDQGHVVTLAGRPELRAQPVAVPRDPSSAAFPVAAAL
                     IVPGSQVRVPGVSRNRTRDGLYVTLLEMGADIAFENEREEGGEPVADLVVRHGPLTGV
                     TVPADRAASMIDEFPILSVIAAFAEGRTVMNGVAELRVKESDRIDAMARGLAANGVEV
                     EETRDTMVVHGMATVPGGASVVTHLDHRIAMSFLILGLAAQAPVSIDDASPIATSFPD
                     FLPLIQGLGGDLG"
BASE COUNT          348 a          755 c          684 g          359 t
ORIGIN      
        1 cggtcgcaaa ataatcaaga aagaacagcg gctcggcacc ctgacagacc agatcgttca
       61 cgcacatcgc gaccagatcc tggccgatcg catccagatg cccggtgtcg atggcaatcc
      121 gcagcttggt gccgacgcca tcggtcgcgg ccaccaggac cggatcgtca tagcccgcgg
      181 cggccgggtc gaacagggcg ccaaagccgc caagcgcgtc catcacaccg gcccgcgcgg
      241 tggcggctgc cgcgggtttg atccgatcaa ccagcgcgtt tcccgcgtcg atatccacgc
      301 ctgcatcgcg atagctgatc ccgttcttcg tcatcggccc gtccccggct ggaatgtcgc
      361 gccccccgat agcggatggc ggggctctgg gcaacgggcc aacgcgcttg accgcgcctg
      421 ccggccgctt tagtcagatc gcgcgctacg ggcctgtagc tcaattggtc agagcagggc
      481 gctcataacg ccttggttgg gggttcaagt ccctccgggc ctaccagcat cccatccctc
      541 caggcccgcc cgtggaagcg gcagaatcaa ggacgggctg ttctcttttg gcggcgcgac
      601 ctggcgcagt ccgggacgaa cgccgcctgc catatgtgat gggacgcgcc gaaacaggat
      661 gacgcttttg cggacaggat tcggtgctga acctttgtcc cggtcatgcg ttttgccgac
      721 cggagccatt catgcacgac gacagcgacc tgatcgacca tatccatctg cgcctgtccg
      781 atttcgaccg gggcgtttcg ttctatgtgg ccatcctgaa cgccctgggc cggggcgcgg
      841 acatccgccg cggtcgcgac tggctggaga tcggcccgct ttatctggat cagtccgaca
      901 acatcacacc ccccagccgc cttcatctgt gctttcgcgc ccgttcgcgc gaagaggtcg
      961 cggcctttca ttcagccggg cttgccgcgg gcggacgcga caacggcgcg cccggcctgc
     1021 gcgattatca tccgggctat tacgcggcct ttctgctgga tcccgacggc aacaatatcg
     1081 aagccaagct tgacgagcag acctagccca gatcgccgcc gaggccctgt atcagcggca
     1141 ggaaatcggg gaaggacgtg gcgatggggc tggcatcgtc gatgctgacc ggggcctggg
     1201 ccgcaagccc gaggatcagg aaggacatcg cgatccggtg gtccagatgc gtgaccacgc
     1261 tggcgcctcc gggcaccgtc gccatgccgt gcacgaccat cgtgtcgcgg gtttcctcga
     1321 cctcgacgcc gtttgccgca agtccccgcg ccatcgcgtc gattcggtcg ctttccttga
     1381 cccgcaattc cgcaaccccg ttcatgaccg tcctgccttc cgcgaaagcg gcgatgaccg
     1441 acaggatcgg aaattcatcg atcatgctgg cggcgcggtc cgccgggacg gtcacgcccg
     1501 tcagcggccc gtggcgcacg accagatcgg ccaccggctc gccgccctct tcgcgttcgt
     1561 tctcgaaggc gatgtcggcg cccatttcca gcagcgtcac atacagcccg tcgcgcgtcc
     1621 gattgcggct gacaccgggc acccggacct gcgatcccgg cacgatcagc gccgccgcca
     1681 ccggaaaggc cgcgctggat gggtcgcgtg gcacggcgac cggctgcgcc cgcaactcgg
     1741 gccggcccgc cagcgtgacg acgtggccct gatccgtcgt ttcggtccgg atctgggcgc
     1801 cgaaccccgc cagcatccgt tcggaatgat cgcgcgtggg ttcggcctcg atcaccaccg
     1861 tctcgccggg cgaattcagg ccggccaaaa ggatcgccga cttgatctgc gcactggcga
     1921 ccggcgtgcg atagcgcagc ggaaccggat cggcggcgcc ctggatggtg atcggcagcc
     1981 gcccgccctc gcgcgccgtg atctgcgcgc caaaggccga cagcggatcg gtgacccgcg
     2041 ccatcgggcg ccgcgacagg ctggcatcgc cggtgaaggt cgcggtgatc ggggtcgtgg
     2101 ccatcgcccc catgatcagc cgcaccccgg tgccggaatt gccgca
//
LOCUS       DTVW01000191            1202 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1259318, whole
            genome shotgun sequence.
ACCESSION   DTVW01000191 DTVW01000000
VERSION     DTVW01000191.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1202)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1202)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1202
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1259318"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1202)
                     /gene="lnt"
                     /locus_tag="EYO87_02555"
     CDS             complement(<1..>1202)
                     /gene="lnt"
                     /locus_tag="EYO87_02555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="apolipoprotein N-acyltransferase"
                     /protein_id="HIC64882.1"
                     /translation="LMALGGALFWAIPGWLAALAAPGWRSRSLTIAAALVLSDWLRGW
                     LFTGLPWNLVGHTWISTPIAQIASSTGAIGLSAITMALAVLPAALWRPFERRATGFLP
                     GIGLAILATGGLWALGLNRLSRPLPPDTDFTIRIVQPDAEQKLKWDPEWSAVFFRRLL
                     DLSAEPGPRDLVIWPETAVNFLLNDAEGVLPVLAGSAGAPLVTGIQRREGGRYFNSLV
                     ALDAQGRPEAVYDKFHLVPFGEYIPWGDALARFGISAFAAQSGRGYSSGSGPASMQAG
                     KLPPFQPLICYEAIFPQHLRGLDNRPAWLLQATNDGWFGRFLGPYQHLAQARLRSIES
                     GLPMMRAANTGVSAVIDARGAVRQSLGLGVAGKIDAKLPGALPPTVWIRWGSMPVVVL
                     VALVLLLA"
BASE COUNT          232 a          403 c          414 g          153 t
ORIGIN      
        1 ccgccagcag cagcaccagc gccaccagca ccaccaccgg catcgagccc cacctgatcc
       61 agacggtcgg cggcagcgcg ccgggcagct tggcgtcgat cttgccggcg acgccaaggc
      121 caagggactg gcgaaccgcg ccgcgggcat cgatcacggc gctgacgccg gtattggccg
      181 cgcgcatcat cggcaatccg gattcgatgc tgcgcaggcg ggcctgggca agatgctgat
      241 acggacccag gaagcggccg aaccagccgt cattcgtggc ctgcaacaac catgccggac
      301 gattgtccag accgcgaaga tgctggggaa agatcgcctc gtagcagatc aggggctgaa
      361 agggcggcag cttgccggcc tgcatcgagg ccgggccgga gccggacgaa tagccgcgtc
      421 ccgattgcgc tgcaaaggcc gagatgccga accttgccag cgcatcgccc cagggaatgt
      481 attcgccaaa gggcaccagg tggaacttgt cgtagaccgc ttcgggtctg ccctgcgcgt
      541 ccagcgcgac gagactgttg aaatagcggc cgccctctcg ccgctggatg ccggtgacca
      601 atggggcacc cgctgacccg gccaggaccg gcagcacgcc ctcggcatcg ttcagcagga
      661 aattcaccgc cgtctcgggc cagatcacaa gatcgcgggg gcccggctcg gccgacagat
      721 ccagcaggcg gcggaaaaag accgcggacc attccgggtc ccatttcagc ttttgttcgg
      781 catcgggctg gacgatccgg atggtgaaat cggtatcggg cggcaggggg cgcgacagcc
      841 ggttcaggcc cagagcccaa agcccgccgg ttgcaaggat tgccagcccg atgcccggca
      901 ggaaaccggt cgcgcggcgt tcgaagggtc gccacagcgc tgcgggcagg acggcaagcg
      961 ccatcgttat cgccgacagc ccgatggcgc ccgtgctcga ggcgatctgc gcaatcgggg
     1021 tcgagatcca ggtatgcccg accaggttcc agggcaggcc ggtgaaaagc cagccgcgca
     1081 gccagtccga cagaaccagc gccgccgcga tggtcaggct gcggctgcgc cagccgggtg
     1141 cggcaagtgc ggccagccag ccgggaatgg cccagaacag ggcgccgcca agcgccatca
     1201 gg
//
LOCUS       DTVW01000192            2436 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1260376, whole
            genome shotgun sequence.
ACCESSION   DTVW01000192 DTVW01000000
VERSION     DTVW01000192.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2436)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2436)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2436
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1260376"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..245)
                     /locus_tag="EYO87_02560"
     CDS             complement(<1..245)
                     /locus_tag="EYO87_02560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013067255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit I"
                     /protein_id="HIC64883.1"
                     /translation="MAFDIARATKYFLMMDFIKGFGLGLKYFFAPKATLNYPHEKGPL
                     SPRFRGEHVLRRYPNGEERCIACKLCEAICPAQAITI"
     gene            complement(245..430)
                     /locus_tag="EYO87_02565"
     CDS             complement(245..430)
                     /locus_tag="EYO87_02565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018000819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64884.1"
                     /translation="MAYSNRIAESLASASEQDKIEFAHFLANNLDSAENARDGARIRD
                     YVAAFDRFSAPKQGEHF"
     gene            complement(436..1467)
                     /gene="nuoH"
                     /locus_tag="EYO87_02570"
     CDS             complement(436..1467)
                     /gene="nuoH"
                     /locus_tag="EYO87_02570"
                     /EC_number="1.6.5.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoH"
                     /protein_id="HIC64885.1"
                     /translation="MDGFWSSSLGIAIILLAQGLALIVFVMLSLVYMVYGDRKIWAAV
                     QMRRGPNVVGPWGLLQTFADALKYVVKEVVIPAGADKFVFFLAPFLSMMLALTAFVAI
                     PFAPGWVMADINVGILFILAISSLEVYGVIMGGWASNSKYPFLGSLRSAAQMISYEVS
                     LGLIIIGVIISTGSMNLTDIVEAQRGMGLLSWYWLPHLPMLVLFFVSCLAETNRPPFD
                     LPEAESELVAGFMVEYSSTPYLLFMAGEYIAMWLMCALIALLFFGGWLSPIPGIPDGA
                     LWMFLKMVFWFFMFAMVKAIVPRYRYDQLMRIGWKVFLPMSLGWVVIVAFLAKFQVFG
                     SFWARWAGM"
     gene            complement(1485..2246)
                     /locus_tag="EYO87_02575"
     CDS             complement(1485..2246)
                     /locus_tag="EYO87_02575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018000817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64886.1"
                     /translation="MRPALRQPLVRAAALAGLAALTGCGAKTEARPPAKPASLSATIA
                     APGAAGDRAALTTARISTKSGQILILEPDGSVTSMDLDSAAGRSAFAVSDADLAALDD
                     KPRPDPAGAGATRPKGPTAQQRAIAAFARRTRPALPDRKEGSEISDKDFLGARVKPLG
                     DGKRSDLVEVTANLRQGVDADIAFSYATCALAGWAKANGARYGRHIRTLQDTRDGKLL
                     IGAAFTISDSKPLGLRVMETNETLRECKARGIPAA"
     gene            complement(2251..>2436)
                     /locus_tag="EYO87_02580"
     CDS             complement(2251..>2436)
                     /locus_tag="EYO87_02580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018000816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64887.1"
                     /translation="WIDQVPANEWQAVPRADLDSAAFVYPIRDFYLTNPIARSSPLMA
                     ELSRMAAARQAPAMAAE"
BASE COUNT          484 a          800 c          756 g          396 t
ORIGIN      
        1 tcgatggtga tcgcctgggc cgggcagatc gcctcgcaca gcttgcaggc gatgcagcgt
       61 tcttcgccgt tgggatagcg gcgcagcacg tgttccccgc gaaaacgcgg gctcagcggc
      121 cccttttcgt gcggatagtt cagcgtcgcc ttgggggcga agaagtattt caggccgagg
      181 ccgaacccct tgatgaaatc catcatcagg aaatacttgg tggcgcgggc gatatcgaaa
      241 gccatcagaa atgctcccct tgcttgggcg cggaaaagcg gtcgaaggcc gccacatagt
      301 cgcggatacg cgcgccgtca cgggcgtttt cggcgctgtc cagattattg gccagaaaat
      361 gcgcgaattc gatcttgtcc tgctccgagg cgctggccag cgattccgcg atcctgttcg
      421 aataggccat gtcgatcaca tccccgccca gcgggcccag aacgatccga agacctggaa
      481 tttcgccagg aaggcgacga tcacgaccca gcccagcgac atcggaagga acaccttcca
      541 gccgatgcgc atcaactggt catagcgata gcgcggcacg atcgccttca ccatggcaaa
      601 catgaagaac cagaagacca tcttcaggaa catccacagc gccccgtcgg ggatgccggg
      661 aatgggcgac agccagccgc cgaagaacag cagcgcaatc agcgcgcaca tcagccacat
      721 cgcgatgtat tcgccggcca tgaacagcag atagggggtc gaggaatatt cgaccatgaa
      781 gcccgccacc aattcggatt cggcctcggg cagatcgaag ggcgggcggt tggtttccgc
      841 caggcaactg acgaagaaca ggaccagcat cggcagatgc ggcagccagt accaggacag
      901 aagccccatc ccgcgctgcg cctcgacgat atcggtcagg ttcatcgaac cggtcgagat
      961 gatgacgccg atgatgatca ggccaaggct gacctcgtag gaaatcatct gcgcggccga
     1021 gcgcagcgaa cccaggaacg gatatttcga gttcgaggcc cagccgccca tgatgacgcc
     1081 gtaaacctcg agcgaggaga tggccaggat gaacaggatg cccacattga tgtcggccat
     1141 cacccagccg ggcgcgaagg gaatcgccac gaaggcggtc agcgccagca tcatcgacag
     1201 gaacggcgcc aggaagaaga cgaacttgtc ggcgccggcc ggtatcacca cttccttgac
     1261 gacatatttc aaggcgtcgg cgaaggtttg cagaaggccc cagggtccga ccacgttcgg
     1321 gccgcgccgc atctgcaccg ctgcccagat cttgcggtcg ccatagacca tgtagaccag
     1381 cgacagcatc acgaagacga tcagcgccag accctgcgcc agcaggatga tggcgatgcc
     1441 cagcgatgaa gaccaaaatc cgtccatgac gcccgtcctt ctgcttacgc cgcgggaatg
     1501 ccgcgtgcct tgcattcgcg caaggtctca ttcgtttcca tcacccgcag gcccagcggc
     1561 ttgctgtccg agatcgtgaa ggcggccccg atcagcaact tgccatcgcg cgtgtcctgc
     1621 agcgtgcgga tgtgacggcc ataacgggcg ccattcgcct ttgcccagcc tgccagcgcg
     1681 caggtggcat acgaaaaggc gatatcggcg tccaccccct ggcgcagatt cgccgtcact
     1741 tcgaccagat cggaccgttt gccgtcaccc agaggcttca cccgcgcgcc cagaaaatcc
     1801 ttgtccgaaa tttcgctgcc ttccttgcgg tccggaagcg cgggtcgggt ccgccgggca
     1861 aaggcggcga tggccctttg ctgcgcggtc gggcctttcg gccttgtcgc gcctgcgccg
     1921 gccggatccg gccgcggctt gtcgtccagc gccgccagat cggcatcgct gacggcaaag
     1981 gcgctgcgcc ccgccgccga atccagatcc atgctggtga cgctgccatc gggttcgagg
     2041 atcaggatct gccccgattt ggtcgagatc cgggccgtcg tcagcgcggc cctgtcgccc
     2101 gccgcgccgg gcgccgcgat cgttgcgctc agcgatgcgg gcttggcggg cggacgcgcc
     2161 tcggtcttcg caccgcaccc cgtcagcgcc gccagccccg caagggctgc agcgcggaca
     2221 agcggctggc gaagggctgg ccgcatgggg ttactctgcc gccatcgccg gcgcctgccg
     2281 cgccgcggcc atccgcgaca attccgccat cagcggagag gaacgcgcga tcggattggt
     2341 caggtagaaa tccctgatcg gatagacgaa ggccgcgctg tccagatcgg ccctcggcac
     2401 ggcctgccat tcattcgccg gcacctggtc gatcca
//
LOCUS       DTVW01000193            2398 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1261575, whole
            genome shotgun sequence.
ACCESSION   DTVW01000193 DTVW01000000
VERSION     DTVW01000193.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2398)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2398)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2398
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1261575"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(65..856)
                     /locus_tag="EYO87_02585"
     CDS             complement(65..856)
                     /locus_tag="EYO87_02585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010396297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein EcsC"
                     /protein_id="HIC64888.1"
                     /translation="MTQQVAKRQMVLPPITDPGLHAQIDRLARRYRDAGGLGMEIMEI
                     VGNSAEGLIERLPAFVRSRMDKITRAALNRAFSAASGTRRVVRDRGDWFNRMASTFSG
                     AAGGVGGLPGAMVELPVTVTLLLRSMLDIAAEHGLDPDSDEVRMECLRIFAAAGPMAE
                     DDGTDLGLLAARLSVTGQTLQGLISRVAPRLSVSLGQKLAAQAAPVFGAVVGASINYT
                     FARYYQELARVHFGIMRLARETGLPQEALTEALRLSIARLDRDRA"
     gene            complement(807..1424)
                     /locus_tag="EYO87_02590"
     CDS             complement(807..1424)
                     /locus_tag="EYO87_02590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011749858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HIC64889.1"
                     /translation="MYEICPETAADEDEVEALYDLCFAPGRTALSSYRLRDGVPRVAD
                     LCLVLRDPSRFLMAAIRFWPVRVAAKPVLLLGPIAVHPTAQGEGLGGLLMRDGLTRAR
                     GLGWRRVLLVGDAPYYSRFGFARLDAVEMPPPTNPDRVLGLELRAGAWVGVVGPVLRE
                     ETPEIVAGLAEIAATPHIGPACIEVGHPRDDTAGRETADGSATDH"
     gene            1537..2139
                     /locus_tag="EYO87_02595"
     CDS             1537..2139
                     /locus_tag="EYO87_02595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019298365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavin reductase family protein"
                     /protein_id="HIC64890.1"
                     /translation="MFYRPEAGHGLPHNPFNAIVAPRPIGWISTRGRMGDNLAPYSFF
                     NAVAYVPPQVMFASTSAKPDRNGTKDSVAQITESGSFCVNIATGDLRDQVNASSAGLP
                     AGDSEFRSAGIEAAECDTIDCPRVAHAAAALECRMTRILPLAGKANFAVLGVVTGIHI
                     RDDCLLDGRFDPRRAGGWIARLGYMDYAAVHELFEMERPK"
     gene            2136..>2398
                     /locus_tag="EYO87_02600"
     CDS             2136..>2398
                     /locus_tag="EYO87_02600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008030404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine phosphoribosyltransferase family protein"
                     /protein_id="HIC64891.1"
                     /translation="MTKTVKDYIRTIADFPHEGIMFRDVTTLFADARGFRMAIDQLLH
                     PYAGAPIDKVVGLEARGFILGGAVAHQLSTGFVPIRKKGKLPGP"
BASE COUNT          416 a          849 c          771 g          362 t
ORIGIN      
        1 gacggccggg ggcgcttcgc cccccggacc ccccgagggt attggcgcaa cgaagaagaa
       61 gaggtcaggc cctgtcgcga tccagccgcg cgatggaaag ccgcaatgcc tcggtcagcg
      121 cctcttgcgg aagccctgtc tcccgcgcca gccgcatgat gccgaaatgg acccgcgcca
      181 gttcctgata atagcgcgcg aaggtgtaat tgatcgaggc gcccaccacc gcgccgaaga
      241 ccggcgccgc ctgcgcggcc agtttctgac ccagcgagac cgacaggcgc ggggcgacac
      301 ggctgatcag accctgcagc gtctgcccgg tgaccgacaa ccgtgccgcc agaaggccca
      361 ggtcggtgcc atcatcttcg gccatggggc cggcggcggc gaagatgcgc aggcattcca
      421 tccgcacctc gtcgctgtcc gggtccagac catgctcggc ggcgatatcc agcatcgagc
      481 gcagaagcag cgtcaccgtg accgggagtt cgaccatcgc gccgggcagc ccgccgacgc
      541 cgcctgccgc gccgctgaag gtcgaggcca tgcggttgaa ccagtcgcct cggtcgcgca
      601 ccacgcgccg ggtgcccgac gcggccgaaa aggcgcggtt caacgcggcg cgggtgatct
      661 tgtccatgcg gctgcggaca aaggcgggca gacgttcgat cagtccctcg gcgctgttgc
      721 cgacgatctc catgatctcc atccccagac cgcccgcatc ccgatagcgc cgcgccaggc
      781 ggtcgatctg ggcgtgaagt cccggatcag tgatcggtgg cagaaccatc tgccgtttcg
      841 cgacctgctg tgtcatctcg tggatgtccg acctcgatac atgccggccc gatatggggt
      901 gtcgcggcga tttcggccag ccccgcgacg atttccggcg tctcttcgcg caggaccggt
      961 cccacgaccc caacccatgc cccggcgcga agttccagtc ccagaacgcg gtcgggattg
     1021 gttggcggcg gcatctcgac cgcgtccagc cgcgcgaaac cgaaacgcga ataataaggt
     1081 gcgtctccca ccagcagcac gcggcgccag cccagcccgc gcgcccgcgt cagcccgtcg
     1141 cgcatcagaa gcccgcccag accttcgccc tgggccgtcg gatgaaccgc gatgggcccc
     1201 agcagcagga ccggctttgc ggcgacgcgg accggccaga agcggatcgc cgccatcagg
     1261 aaccggctcg ggtcgcgcag cacgaggcac agatcggcca ccctgggaac gccgtcgcgc
     1321 agacgatacg atgacagcgc ggtccgcccc ggtgcgaaac acagatcgta gagcgcctcg
     1381 acctcgtctt cgtcggccgc ggtctcgggg cagatctcgt acatcgcgcc tccttgcgaa
     1441 aagggcgcca tagcacgacc ttgccgcggg cggaacattg cggatggcgc aaaggggtgg
     1501 caggttggcg ccagtgacat cagaagaagg ccgcgcatgt tctatcgccc cgaagccgga
     1561 cacggcctgc cccacaaccc gttcaatgcc atcgtggcgc cccgtccgat cggctggatc
     1621 tcgacgcggg ggcgcatggg cgacaatctc gccccctatt ccttcttcaa cgcggtggcc
     1681 tatgtcccgc cgcaggtcat gttcgcctcg accagcgcca agcccgaccg caacggcacc
     1741 aaggacagcg tggcccagat caccgaaagc ggcagtttct gcgtcaatat cgcgaccggc
     1801 gatctgcgcg atcaggtcaa tgccagttcc gccggcctgc ccgcgggcga cagcgagttc
     1861 cgctcggcgg gcatcgaggc cgccgaatgc gacacgatcg actgcccgcg cgtggcccac
     1921 gccgccgccg cgctggaatg ccggatgacg cggatcctgc ccctggcggg caaggccaat
     1981 tttgccgtcc tgggcgtcgt caccggcatc catatccgcg acgattgtct gctcgatggc
     2041 cgcttcgatc cgcgcagggc cggcggctgg atcgcgcgcc tgggctatat ggattacgcg
     2101 gccgtccatg agctgttcga aatggaacgc cccaaatgac aaagacggtc aaggactaca
     2161 tccgcaccat cgcggatttc ccgcatgagg ggatcatgtt ccgcgacgtg accacgctgt
     2221 ttgccgatgc gcgcggcttt cgcatggcca tagaccagct gctgcatccc tatgccggcg
     2281 cgccgatcga caaggtggtc ggcctggaag cgcgcggctt catcctgggc ggcgcggtcg
     2341 cgcatcagct ttccaccgga ttcgtgccga tccgcaagaa gggcaagctg cccggtcc
//
LOCUS       DTVW01000194            1611 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1262716, whole
            genome shotgun sequence.
ACCESSION   DTVW01000194 DTVW01000000
VERSION     DTVW01000194.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1611)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1611)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1611
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1262716"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>1611
                     /locus_tag="EYO87_02605"
     CDS             <1..>1611
                     /locus_tag="EYO87_02605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_354231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase large subunit"
                     /protein_id="HIC64892.1"
                     /translation="NGDNLLIAGSEVGMVPVDEAKVREKGALGPGQMIAVDMWEGKLY
                     HDAEIKDRLAGSQPFGEWIEKVVDLNDMMRELPERARFGGEDLRRRQKAAGYTLEELE
                     HVLAPMAEDGKESIASMGDDTPPAVLSNQYRPMSHFFRQNFSQVTNPPIDSLRETRVM
                     SLKTRFGNLKNVLDESSAQTEILILESPFIANGEFSEMVKMFGENVTHIDCTFPDDAG
                     QDALGEGLARIRAEAEDAVRSGAGHLVLTDEHQGSDRVAMPMILATSAVHSWLTRKGL
                     RTFCSVNVRSAECIDPHYFAVLIGSGATTVNPYLAQDSIQDRIERGLLEGSLIDNMRR
                     YRDAVDAGLLKIMAKMGISVLSSYRGGLNFEAVGLSRAMVAEYFPGMHSRISGIGLHG
                     LQAKIEALHQKAFHAENVELLPVGGFYKLRRSGEKHAWEANTMKMLQLACEKASYDIW
                     KQFSATMRANPPIHIRDLLDIKPLGKAVPLEEVESITSIRKRFVTPGMSLGALSPEAH
                     MTLNIAMNRIGAKSDSGEGGEDPAHSQPL"
BASE COUNT          321 a          479 c          543 g          268 t
ORIGIN      
        1 aatggcgaca acctgctgat cgccggctcc gaggtcggga tggtcccggt cgacgaggcc
       61 aaggtccgcg aaaagggcgc gcttgggccg ggccagatga tcgccgtcga catgtgggag
      121 ggcaagcttt accacgatgc cgagatcaag gaccgcctgg ccggaagcca gccctttggc
      181 gaatggatcg agaaggtcgt cgatctgaac gacatgatgc gcgaattgcc cgaacgggcg
      241 cggttcggcg gcgaggatct gcgccgccgc cagaaggccg ccggttatac gctggaagaa
      301 ttggaacatg tcctggcgcc gatggccgag gacggcaagg aatcgatcgc ctcgatgggc
      361 gacgacaccc cgccggcggt gctgtcgaac cagtaccggc cgatgagcca cttctttcgc
      421 cagaactttt cccaggtgac gaacccgccc atcgacagcc tgcgcgaaac gcgggtgatg
      481 agcctgaaga cccggttcgg caacctcaag aacgtgctgg acgaaagcag cgcgcagacc
      541 gagatcctga tcctggaaag cccgttcatc gccaatggcg agttttccga gatggtgaag
      601 atgttcggcg agaacgtcac ccatatcgac tgcacctttc ccgatgacgc ggggcaggac
      661 gcgcttggcg aagggctggc ccggatccgg gccgaggccg aggatgcggt gcgttcgggc
      721 gcgggccacc tggtgctgac ggatgaacat cagggctcgg accgggtcgc gatgccgatg
      781 atcctggcga ccagcgcggt ccattcctgg ctgacgcgca aggggctgcg gaccttctgt
      841 tcggtcaatg tgcgcagcgc cgaatgcatc gatccgcatt atttcgcggt attgatcgga
      901 tcgggcgcga ccacggtgaa cccctatctt gcacaggatt cgattcagga ccggatcgaa
      961 cgcggcctgc tggagggcag cctgatcgac aacatgcgcc gctatcgcga cgcggtggac
     1021 gcgggtcttc tgaagatcat ggccaagatg ggcatctcgg tcctgtcttc ctatcgcggc
     1081 ggcctgaact tcgaggccgt gggcctgtcg cgcgcgatgg tcgcggaata ttttcccgga
     1141 atgcactctc gcatcagcgg catcggcctg cacgggctgc aagccaagat cgaggcgctg
     1201 caccagaagg cgtttcacgc cgagaatgtc gaattgctgc cggtgggcgg cttctacaag
     1261 ctgcggcggt cgggcgaaaa gcacgcctgg gaagccaata cgatgaagat gctgcaactg
     1321 gcctgcgaaa aggccagcta tgacatctgg aagcagttca gcgccacgat gcgggccaat
     1381 ccgccgatcc atatccgcga cctgctggac atcaagccgc tgggcaaggc ggtgccgctg
     1441 gaagaggtgg aaagcatcac ctcgatccgc aagcgcttcg tgacgccggg catgtcgctg
     1501 ggggcgctgt cgcccgaggc gcacatgaca ttgaacatcg ccatgaaccg gatcggcgca
     1561 aagtcggatt cgggcgaggg cggcgaggat ccggcccaca gtcagcccct g
//
LOCUS       DTVW01000195            3610 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1263401, whole
            genome shotgun sequence.
ACCESSION   DTVW01000195 DTVW01000000
VERSION     DTVW01000195.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3610)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3610)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3610
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1263401"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..606
                     /locus_tag="EYO87_02610"
     CDS             <1..606
                     /locus_tag="EYO87_02610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011747601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HIC64893.1"
                     /translation="PHTRLPVYKTERENVVGVVHAKDLLRAVNRAVREAGDAAAARNF
                     DVMAVAMQPYFIPDTTALDEQMREFLKRRTHFALVVDEYGTLRGLITLEDILEEIVGE
                     IADEHDTEADQTLTPNAQGDYTVDGGMTIRDLNRQLDWNLPDDEANTVAGLVIHMAQS
                     IPEQGQVFSFHGYRFEVVTRRENRITRLRIRPLANGAATKE"
     gene            complement(715..2304)
                     /locus_tag="EYO87_02615"
     CDS             complement(715..2304)
                     /locus_tag="EYO87_02615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011747701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegQ family serine endoprotease"
                     /protein_id="HIC64894.1"
                     /translation="MKTPSPKHLLTASALALTIGLGVAGAQQSNSDVSPQVSQQAQEA
                     ANNNKPLDTTVSPQQSSQMMPGGFADLVEKVAPAVVNITTTSVVTQPAGGPTFPEGSP
                     FSELFRDFGFQGQPGEPGQPGQHGQPRRQMPQRSNSLGSGFVISADGFIVTNNHVIDG
                     ADEIEIELYSGKTLPAKVVGTDPNTDLALLKVNSDSALPFVKFGDSDKARVGDWVMAL
                     GNPLGQGFSASTGIVSARNRELSGTYDDFLQTDAAINRGNSGGPLFNMDGEVIGVNTA
                     ILSPNGGSIGIGFSMASNVVSEVMNQLQEYGETRRGWLGVKIQDVTPDMAEALGLKAD
                     RGAMVTDVPDGPAKDAGMKAGDVITSFDGQPVEDTRGLVKRVAEAPSGQAVEVVVQRG
                     DGEKTLSVTLGRRETAVGGNNADGGATPDQGGNQEMLGMSLVPLTPEIASQLGADPST
                     KGLLIEALDPEGVAADKGLAAGDVITEASQQPVASIADLKARIDDARKAGRKSVLVLI
                     RREGEPRFVALPIGDAKSDSQ"
     gene            complement(3153..3610)
                     /locus_tag="EYO87_02620"
                     /pseudo
     CDS             complement(3153..3610)
                     /locus_tag="EYO87_02620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_353431.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="protease modulator HflC"
BASE COUNT          571 a         1221 c         1181 g          637 t
ORIGIN      
        1 ccgcatacgc ggttgccggt ctacaagacc gaacgcgaga acgtggtggg cgtggtccat
       61 gccaaggatc tgctgcgcgc cgtcaaccgc gccgtgcgcg aggccgggga cgcggcggcg
      121 gcgcggaact tcgacgtcat ggcggtggcg atgcagccct atttcatccc cgacaccacg
      181 gcgctggacg aacagatgcg cgaattcctg aagcgccgca cgcattttgc gctggtcgtg
      241 gacgaatatg gcaccctgcg cggcctgatc acgctggagg atatcctgga agaaatcgtg
      301 ggcgagatcg cggatgaaca cgacaccgag gccgaccaga ccctgacgcc caatgcgcag
      361 ggcgattaca cggtggatgg cggcatgacc atccgcgacc tgaaccgcca actggactgg
      421 aacctgcccg atgacgaggc caataccgtc gcgggtctgg tcatccacat ggcgcaatcg
      481 attccggaac agggccaggt cttttcgttc cacggctacc ggttcgaggt cgtcacccgt
      541 cgcgaaaacc gcatcacccg cctgcgcatc cgcccactgg ccaacggcgc ggccaccaag
      601 gagtaggccg ggccttgccc gtggcgccgt ttccgggccg tctgtcggcg ccaccgcccg
      661 aaacgcgaaa ggggcggccc gcccgaccgc ccccttgcaa ttctttcagc cgccttactg
      721 gctgtcgctt ttcgcgtctc cgatcggcag ggcgacaaaa cggggctcgc cctcgcggcg
      781 gatcagcacc agcacggatt tccggccggc cttgcgggcg tcatcgatcc gggccttcag
      841 atcggcgatg ctggcgaccg gctgctggct ggcctcggtg atgacgtcac cggcggccag
      901 tcccttgtcg gcggcaacgc cttcgggatc gagtgcctcg atcagcaaac ccttggtgct
      961 gggatcggcg ccaagctggg atgcgatttc gggcgtcagg ggcaccaggc tcattcccag
     1021 catttcctga ttgccaccct ggtccggcgt cgcgccgcca tcggcgttgt tgccgcccac
     1081 ggcggtctcg cgccgaccca gcgtcaccga cagggtcttc tcgccgtcgc cgcgctggac
     1141 gacgacctcg accgcctggc ccgacggcgc ctcggccacg cgcttgacca agccgcgcgt
     1201 atcctcgacc ggctgaccgt cgaagctggt gatcacgtcg cctgccttca tcccggcatc
     1261 cttggccggc ccgtcaggca catcggtgac catcgcacca cgatcggcct tcagtccaag
     1321 cgcctcggcc atgtctgggg tcacgtcctg gatcttgacg cccagccagc cgcgacgggt
     1381 ctcgccatat tcctgaagct ggttcatgac ttcgctgacc acgttggaag ccatcgagaa
     1441 accgatcccg atcgagccgc cgttgggcga caggatcgcg gtgttcacgc cgatgacctc
     1501 gccatccatg ttgaacagcg ggcccccgga attgccccgg ttgatcgccg cgtcggtctg
     1561 gagaaaatcg tcataggtgc ccgacaattc gcgattccgc gccgagacga tcccggtcga
     1621 ggccgagaac ccctgcccca gcgggttgcc gagggccatg acccagtcgc ccacccgggc
     1681 cttgtcggaa tcgccgaact tcacgaaggg cagcgcgctg tcgctgttca ccttcagcag
     1741 cgccaggtcg gtattgggat cggtccccac caccttggcg ggcaaggtct tgccggaata
     1801 tagctcgatc tcgatctcgt cggcgccgtc gatgacgtgg ttgttggtca cgatgaaacc
     1861 gtcggcggaa atcacgaagc ccgaacccag tgaattcgat cgctgcggca tctgccggcg
     1921 cggctgaccg tgctgcccgg gctgaccggg ttcgccaggc tggccctgaa agccgaaatc
     1981 gcggaaaagt tcggaaaacg ggctgccttc gggaaaggtc ggcccgccgg ccggctgggt
     2041 cacgaccgag gtcgtggtga tgttgacgac ggcgggggcg accttctcga ccagatcggc
     2101 aaagccgccg ggcatcatct gtgacgattg ctgcggcgaa accgtcgtgt ccagaggctt
     2161 gttgttgttc gctgcttcct gcgcctgctg gctgacttgc ggcgagacgt cggagttgct
     2221 ctgctgcgcg ccggccacgc caaggcctat ggtcagcgcc agggcagagg cggtcagaag
     2281 atgcttgggg gaaggcgttt tcattatgga tgtcctcttg attcaatcac tgcgccgggg
     2341 cgaggccgtc ccggaactcg actgaataca aacgggatcc gcctccgagt tgcaaataaa
     2401 ccacgctctc gcaaagtgaa ctgatcgtga catttgtttc aacatcccgc gtccccgttc
     2461 catccgcgca atcctgcacc gattctgccg atgataccag aaatccgtgg cgccataccg
     2521 gggagggaaa cggaccgggc gctgcccggt ccggtcactg ccgctgggcg cgaagccgcg
     2581 cggcacgcgc ggcgggaacg cgaaagggga tccgggaccg gcgtcgagcg gcaacgaaaa
     2641 aagggcgaat gccgcacggc atccgccccg tccttctctg tcgccgccac ccggcctcaa
     2701 ttgccgccgg tcgtgtcccc tgcggttcca ttccggggcg gcgctgtatc ggaactgccg
     2761 ccagcctcgg gcgtctgttc ggcgggtgcc ggcgtctgcg gttgagacga ttgcccggcc
     2821 ccgccggcgg aagcgtcacc agcccccggg gtcgtttcgg gcgccgctgt ctggccagcg
     2881 ggctgatcgg cggtcgccga gcccccggtc atggggcgga ccacctctga cggccgttcg
     2941 ggcggggtgg ccaggctttc gggaaccggt gtcagcttga cgcccgcgct ttcgcccagg
     3001 ggcttgcctt cgcggtcggt cacggtcggc gtcaccagat cctcttcctc agtcgtcgct
     3061 gcgccatcgg caccgcgcgc ggcattgctt tgcgccgagg aaccgggcgg cgtggccacc
     3121 ggggcgggat tggcccggct tgcgccatcg tcgcgcagat agctgaagaa ctcgccgtcg
     3181 ggctggatca ccatgctgct gttctggccc ttcagcgcgc gttcatagga ggtcatcgag
     3241 cgcgtgaagg caaagaattc cggatcgcgg ccgaacgcgt cggcatagat tgcgttgcgt
     3301 tccgcatccg cctcgccgcg aacgatcgag gcgcgcttct gggcttcgga ggtcagctcg
     3361 accacggtcc ggtcggcagc cgcgcggatg cgctgcgcgg cctctccacc acgggcaatc
     3421 tcgtccgccg cctcgcgctg acgttccgcc cgcatccggg cataggtcgc ggtcaggttc
     3481 tgttcgggca gatcggtccg ggtcaggcgc acgtcgatga tctcgacgcc aaggccggtc
     3541 gaattgttgc gcgcctcgtc gcggatctgg ttcatcagcc cggtccggtc atccgacagc
     3601 acgctggtcg
//
LOCUS       DTVW01000196            1341 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1263612, whole
            genome shotgun sequence.
ACCESSION   DTVW01000196 DTVW01000000
VERSION     DTVW01000196.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1341)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1341)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1341
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1263612"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..855
                     /locus_tag="EYO87_02625"
     CDS             <1..855
                     /locus_tag="EYO87_02625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001327438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HIC64895.1"
                     /translation="NRLIDPTAGEVIFDNRDVVQMSQSELRQFRRQKTAMVFQKFALF
                     PHRTVLENTTYGLAVQGVKPREAEERARRWISRVGLEGFEASYPNQLSGGMQQRVGLA
                     RALTNDAEILLMDEAFSALDPLIRTDMQSVLLDLQAELRKTIMFITHDLDEALKLGDQ
                     IAILRDGRIIQQGTGEQIVLRPADDYISNFVRDIRRGHVITVRTIMRRGKRAESPVSL
                     PATTLLEEAARAMTNAEVSRGNVVDEDGTHLGMVTLSKCVAEMIAPDTSDEDADDDAA
                     IAPEPLSA"
     gene            916..>1341
                     /locus_tag="EYO87_02630"
     CDS             916..>1341
                     /locus_tag="EYO87_02630"
                     /inference="COORDINATES: protein motif:HMM:PF00710.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64896.1"
                     /translation="MISAPARAGMGQARQDHMRICIINTSGTISSIGKPLAPMPAARF
                     AETVDRLLGPSLTAAMPWARIHFDTGLHFDSPTGTLDSSEVRPEDWCRMAGRILDLHE
                     DFDAFVILHGTDTMDFTAAALPLLLNVFDARGRARAGLAA"
BASE COUNT          233 a          442 c          450 g          216 t
ORIGIN      
        1 aaccggctga tcgacccgac cgccggagag gtcatcttcg acaatcgcga cgtggtgcag
       61 atgtcgcaat ccgaactgcg ccagttccgc cgccagaaga ccgcgatggt gttccagaaa
      121 ttcgcgctgt tcccgcatcg gacggtgctg gagaacacga cctacggact ggccgtgcag
      181 ggcgtgaagc cccgcgaggc cgaggaacgc gcccgccgct ggatcagccg cgtggggctg
      241 gagggcttcg aggcaagcta tcccaaccag ttgtcgggcg ggatgcagca gcgcgtgggc
      301 ctggcccgcg ccctgaccaa cgacgccgag atcctgctga tggacgaggc cttctcggcg
      361 ctggatccgc tgatccgcac cgacatgcag tcggttctgc tggatttgca ggccgagttg
      421 cgcaagacca tcatgttcat cacgcatgat ctggacgaag ccctgaagct gggcgaccag
      481 atcgcgatcc tgcgcgacgg gcgcatcatc cagcaaggca ccggcgaaca gatcgtgctg
      541 cggcccgccg acgattacat cagcaatttc gtccgcgata tccggcgcgg ccatgtcatc
      601 accgtgcgca cgatcatgcg gcgtggcaaa cgtgccgaaa gccccgtcag cctgccggcc
      661 acgaccctgc tggaagaggc cgcgcgcgcc atgaccaatg ccgaggtctc gcgcggcaat
      721 gttgtggacg aggatggcac ccatctgggc atggtcacgc tgtcgaaatg cgtggccgag
      781 atgatcgcgc ccgacaccag cgacgaggat gccgacgatg atgcggccat cgcgcccgag
      841 ccgctgagcg cgtagcggga cacgggcccg gcggtcgggg aggcgcggtt cgtccggccc
      901 cttttacgcg accggttgat ttcggcgccg gcgcgtgccg ggatggggca ggcgaggcag
      961 gaccacatgc ggatttgcat catcaatacc agcggcacga tcagcagcat cggcaaaccg
     1021 ctggccccga tgccggcggc gcgtttcgcc gagaccgtgg accgcctgct gggtccgtcg
     1081 ctgactgctg ccatgccatg ggcgcggatc catttcgata ccggtctgca tttcgacagc
     1141 cccaccggca cgctggacag cagcgaggtc cgtcccgagg actggtgccg gatggccgga
     1201 cgcattcttg atctgcacga ggatttcgac gctttcgtga tcctgcacgg caccgacacg
     1261 atggatttca ccgccgcggc cctgccgctg ctgctgaacg tcttcgatgc ccgcggccgg
     1321 gcgcgcgccg gtctggcggc g
//
LOCUS       DTVW01000197            3989 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1265105, whole
            genome shotgun sequence.
ACCESSION   DTVW01000197 DTVW01000000
VERSION     DTVW01000197.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3989)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3989)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3989
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1265105"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            315..1118
                     /locus_tag="EYO87_02635"
     CDS             315..1118
                     /locus_tag="EYO87_02635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HIC64897.1"
                     /translation="MDAALAEAFEISWPASEYADAGGFRVGRGLGAGGRVSSARAVGA
                     WRGDHIDAAIAIHRGWDQRPVFRVADDDAALAGALESRGFRRETPTAVMATATRALTD
                     IAIPSVTTFTLWPPLAIQREIWAAGNIGPARQAVIERVAQPKTTILGRTSDRAAGAAF
                     VAVHDRIAMVHCVEVLGAWRQRGLAGWMMRQAAFWADAQGASRLALAVSRPNMSAMAL
                     YRKLGFREVAGYGYFAPPSDRADLIAAAMSAGTSAASPIGSRRGPVNPA"
     gene            complement(1007..1711)
                     /locus_tag="EYO87_02640"
     CDS             complement(1007..1711)
                     /locus_tag="EYO87_02640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011909990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin biosynthesis protein CbiX"
                     /protein_id="HIC64898.1"
                     /translation="MTEARAVIVSHGQPGDPVPQQRAIEDLAAAVARNDPGCEVRGAT
                     LAMPGALAETCEPDSLIYPMFMAEGWFTRTELPRRLDRAGAAGARVLPPFGADPALPA
                     LIVRIALAAAADEGWTPSETTLLLSAHGSQRSPASFAITTAIAAQIAPHFARVVTGFV
                     EQAPWLADAARDLDRAVHLPFFALRAEHVTDDLPRALDQAGFTGPRLDPIGLAAEVPA
                     LIAAAIRSARSDGGAK"
     gene            complement(1708..2271)
                     /locus_tag="EYO87_02645"
     CDS             complement(1708..2271)
                     /locus_tag="EYO87_02645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020042080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4202 domain-containing protein"
                     /protein_id="HIC64899.1"
                     /translation="MTTRLDKAFSAIDAANARDPGLENGKPANLLYGQRMTEEQQRLF
                     PEASEPLRIACRGQHVERWTLPRDAYPMDRAGYLRWRQEQGRRHADRIAGIMRDAGYD
                     DDQIDRARRMLTKQGLKRDPEVQALEDVICFTFIRWYLGDFMAEQPDDKMPRIIERTA
                     KKMSPEGRARALTEFDMPDALARHFRQ"
     gene            complement(2381..3436)
                     /locus_tag="EYO87_02650"
     CDS             complement(2381..3436)
                     /locus_tag="EYO87_02650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HIC64900.1"
                     /translation="MRRTRGKARVLASVTIMGAGIFGLSCAWEMARRGARVHVIEARR
                     IGAGSSGGHVGALAPHAPENWNRKKQFQLDSLLMADDFWRAVETASGRCAGFARTGRV
                     QPLAEGAAELLEARLDASAIRWPAAMAMRITQAPATSLIPDSPSGLWLEDGLSARLNP
                     RAALQALAHAIRASGGRISEGTSVRPQTGPILWATGAEGLAHLSQALDRPVGKGVKGQ
                     SVLLGHAAPEAAQIFADGLHVVPQADGTTAVGSTTENDFTHPDPDDRCDGLVVRARAI
                     CPGLRDAPILECWAGIRPRAGSRAPLLGAWPGRSGHYVSNGGFKIGFGMAPMIARVMA
                     RLILDGRDEVPPDFRLI"
     gene            3435..>3989
                     /locus_tag="EYO87_02655"
     CDS             3435..>3989
                     /locus_tag="EYO87_02655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007118194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HIC64901.1"
                     /translation="MGDLDEITPGSQPGLDWCEGGVPVSTRFDDPYFSLAGGLAETRH
                     VFLAGNDLPARLRPGFHIAELGFGTGLNCLALARVAQVPMRMTSFEAFPMAPEQMARA
                     HAAFPELAALAADLRAGLSDGTAIRVGAVELQLVIGDARETLPRWQGCADAWFLDGFS
                     PAKNPEMWSAALMAEVGRHTSPDGS"
BASE COUNT          570 a         1325 c         1450 g          644 t
ORIGIN      
        1 gcgccgggct tttccatcgg aaacacgcat gtcatggccg gcgtacccga ggtgtttcgc
       61 ggcatggtgg actggctgat cccccgattg gccgccgggc gcccggtgcg gtccgagacg
      121 gtcgaggtcc ggcgcggcga aagcgatgtg gccgaggagc tgaaggcggt cgcggccgaa
      181 ttccccgatg tctcgatggg atcctatccc tatcacgatg aacggggctg gggcaccaac
      241 ctggtcgtgc gcgggctgga cgcggatcgc gtcgccgtgg ccatggccga gttgaagcgg
      301 cggctgtcgc tgtgatggac gccgccctgg ccgaggcttt cgagatcagt tggccggcat
      361 ccgaatatgc cgatgcgggc ggtttccggg tcgggcgcgg cctgggcgcg ggcggccggg
      421 tcagttcggc ccgcgccgtg ggcgcgtggc gtggcgatca catcgacgct gccatcgcca
      481 tccatcgggg ctgggatcag cggccggtct tccgggttgc cgatgacgat gcggcgctgg
      541 ccggggcgct ggaatcgcgg ggatttcgtc gcgagacgcc caccgcggtg atggcgaccg
      601 ccacccgggc cctcaccgac atcgcgattc cgtcggtgac caccttcacc ctgtggccgc
      661 cgctggcgat ccagcgcgaa atctgggctg cgggcaatat cggacctgcc cggcaggcgg
      721 tgatcgagcg ggtggcgcag cccaagacca cgatcctcgg ccggacctcg gatcgcgcgg
      781 cgggggcagc cttcgtggcg gtccatgacc ggatcgcgat ggtgcattgc gtcgaggttc
      841 tgggcgcgtg gcggcagcgc ggtctggccg gctggatgat gcggcaggcg gccttctggg
      901 ccgacgctca gggggcatcg cggctggctc tggcggtcag ccggccgaac atgtcggcga
      961 tggcgcttta ccgaaagctg ggatttcgcg aggtggcggg ttatggctat ttcgccccgc
     1021 catcggaccg ggccgatctg atcgcggcgg cgatgagcgc gggaacctcg gcggcaagtc
     1081 cgatcggatc gaggcgcggg ccggtgaacc ccgcctgatc cagggcccga ggcagatcgt
     1141 cggtcacatg ttccgccctc agcgcgaaga agggcaggtg cacggcgcgg tccagatcgc
     1201 gcgcggcatc ggcaagccac ggagcctgtt cgacgaagcc cgtcaccacg cgggcgaaat
     1261 gcggcgcgat ctgcgccgcg atcgcggtgg tgatggcaaa gctggccggc gagcgttgcg
     1321 agccatgggc gctgagcagc agcgtcgtct cggacggggt ccagccctcg tcggcggcgg
     1381 cagcaagcgc gatccgcacg atcagcgcag gcagggccgg atcggctccg aaggggggca
     1441 ggacgcgggc gccggcggcc ccggcgcggt ccagccggcg cggcaattcg gtgcgcgtga
     1501 accacccctc ggccatgaac atcggataga tcaggctgtc cggttcgcag gtttcggcca
     1561 gcgcgccggg catcgccagc gttgcccccc ggacttcgca accgggatcg ttgcgagcga
     1621 cggcggccgc gagatcctcg atcgcgcgct gctgcggcac gggatcgccc ggctgcccat
     1681 gcgagacgat gaccgctcgc gcctccgtca ttggcggaaa tgtcgcgcca aggcgtcggg
     1741 catgtcgaat tccgtcaaag cgcgggcgcg gccttcgggc gacatcttct tcgcggtcct
     1801 ttcgatgatg cgcggcatct tgtcgtcggg ttgttccgcc atgaaatcgc ccagatacca
     1861 gcggatgaag gtgaagcaga tcacgtcctc cagggcctga acctcggggt cgcgcttcag
     1921 tccctgcttg gtcagcatcc tgcgggcacg gtcgatctgg tcgtcgtcat agcccgcgtc
     1981 ccgcatgatc ccggcgatgc ggtcggcatg gcggcggccc tgttcctgcc gccatcgcag
     2041 atagcccgcg cgatccatcg gataggcgtc gcggggcaat gtccagcgtt cgacatgctg
     2101 gccgcggcag gcgatgcgca ggggttccga cgcttccgga aacaggcgct gctgttcctc
     2161 ggtcatccgc tggccataga gaagattggc cggtttcccg ttctcgaggc cgggatccct
     2221 tgcattcgcc gcgtcgatgg cgctgaaggc cttgtcgagc cgtgtggtca tgcgctttct
     2281 ccgtgttctc ggccagtttc aaccgtcttc ggccgcgttt gcaagcggcg atgatggcgc
     2341 gcggcgaccg tggtcggggc cgccacgcgc cggaaatgcc tcagatcagg cggaagtcgg
     2401 gtggaacctc gtccctgccg tcaaggatca gccgggccat gacccgggcg atcatcggcg
     2461 ccatgccgaa gccgatcttg aacccgccat tggagacata atgtccagag cggccgggcc
     2521 aggcgcccaa cagcggcgcc cgcgatccgg cgcgcgggcg gatccctgcc cagcattcga
     2581 ggatcggggc gtcgcgaagg ccggggcaga ttgcgcgggc gcggaccacc agcccgtcgc
     2641 accgatcatc cggatcagga tgcgtgaaat cattttccgt ggttgagccg accgccgtcg
     2701 tgccatcggc ctggggcacg acgtgcagcc cgtcggcaaa gatctgtgcc gcctcggggg
     2761 cggcatggcc cagcaggacc gactgcccct tgacgccctt gccgacaggg cggtccaggg
     2821 cttgcgacag atgcgccagc ccttcggcgc cggtcgccca gaggatgggg ccggtctggg
     2881 gccggaccga cgtgccttcg ctgatccggc caccgcttgc ccggatcgca tgggccagcg
     2941 cctgcagcgc ggcccggggg ttcagccgcg cggacagccc gtcttccagc cacaggcccg
     3001 aggggctgtc agggatcagg ctggtcgccg gggcctgcgt gatccgcatc gccatcgcgg
     3061 ccggccagcg gatcgccgag gcatcgaggc gcgcctccag cagttcggcg gccccctccg
     3121 ccaggggctg gacccgcccg gttcgcgcaa agcccgcgca acgccccgaa gcggtctcga
     3181 ccgcgcgcca gaaatcatcg gccatcagca ggctgtccag ctggaactgt tttttccggt
     3241 tccagttttc gggcgcatgc ggcgccagcg caccgacatg gccgcccgag gatccggccc
     3301 cgatgcggcg ggcctcgatc acatggaccc tggcgccccg gcgggccatt tcccaggcgc
     3361 aggacaggcc gaaaatcccc gcccccatga tcgtgacgct tgccaagacg cgagcctttc
     3421 ccctagttcg gcgcatgggt gatctagacg aaatcacgcc gggcagccag ccgggactgg
     3481 attggtgcga ggggggcgtg ccggtctcga cacgctttga cgatccctat ttcagcctgg
     3541 ccggcgggtt ggcggaaacg cgccacgtct ttctggcggg caacgatctg cccgcgcgtc
     3601 tgcgccccgg tttccacatt gccgaactgg gcttcgggac cgggctgaac tgcctcgcgc
     3661 tggccagggt ggcgcaggtg ccgatgcgaa tgaccagctt cgaggcgttt ccgatggcgc
     3721 cggagcagat ggcgcgcgcc catgcggcct ttcccgaatt ggccgcgctg gcggccgatc
     3781 tgcgcgcggg tctgtcggac ggcacggcga tccgcgtcgg cgcggtcgaa ttgcagctgg
     3841 tgatcgggga tgcgcgcgaa acgctgccgc gatggcaggg ctgcgcggat gcttggttcc
     3901 tggacgggtt ttcgcccgcg aagaaccccg agatgtggtc cgccgcgctg atggccgagg
     3961 tcggccggca cacatcgccg gacggcagc
//
LOCUS       DTVW01000198            1911 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1267765, whole
            genome shotgun sequence.
ACCESSION   DTVW01000198 DTVW01000000
VERSION     DTVW01000198.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1911)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1911)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1911
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1267765"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..315)
                     /locus_tag="EYO87_02660"
     CDS             complement(<1..315)
                     /locus_tag="EYO87_02660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018184574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64902.1"
                     /translation="MAPLPNINGKFTLFSQRRTIQGHGINRPGQIIASDNVKRSNDMP
                     TGTNGNDTLLGTAASEYFNGLGGNDLILTRAGNDRAYGGSGNDRVYGQDGNDTVDGGA
                     GND"
     gene            complement(538..1230)
                     /locus_tag="EYO87_02665"
     CDS             complement(538..1230)
                     /locus_tag="EYO87_02665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_354473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HIC64903.1"
                     /translation="MLELSGIRISRGDFALSADLSVPGGARVAILGPSGSGKSTLLSL
                     IGGFLSPDQGHIRWNGQNIDALPPGRRPVSFLFQDQNLFPHLSVAQNVGLGLRADLRL
                     SVEQRGRVTQVLRDVGLPDLAQRRPANLSGGQQGRVALARVLLRARPILLLDEPFSAL
                     GPALKSDMLRLLDRIATQTGATVLMVTHDPQDARHFAPATIVIDKGVAHSPVETGPLL
                     DHPPPGLKAYLG"
BASE COUNT          374 a          607 c          628 g          302 t
ORIGIN      
        1 gtcgtttccg gcgccgccgt cgacggtgtc gtttccgtcc tggccataga cccggtcatt
       61 gcccgaaccg ccataggcgc ggtcattgcc tgcgcgtgtc aggatcaggt cgttaccccc
      121 aagtccgttg aaatattccg atgcggccgt gcccagaagg gtgtcgttgc cattggttcc
      181 cgttggcatg tcattgctcc ttttcacatt gtccgaggcg atgatttgcc ccggccgatt
      241 gatgccgtga ccctgaatgg ttcggcgctg tgaaaagagc gtgaatttcc cgttaatatt
      301 gggaagcggc gccattttta tattatcatg cgggaaatgg atcgtctgga aattttaaaa
      361 catgtaaatg ctgcgacttt tcgcggccaa ttttcggaaa tcgcatcgct gggcgaccag
      421 acctgagcgt ggcgattccc tggtccggtc atttcgatgt ccggagggat ctcaaatctg
      481 caagtttcga tggaacgaca tccgaaggaa aattggcgct gcgggatgcg acgcgggtca
      541 gcccagatag gctttcagcc cgggcggcgg gtggtccaga agcgggccgg tctcgaccgg
      601 cgaatgggcg acacccttgt caatcacgat tgtggccggc gcgaaatgac gggcgtcctg
      661 cggatcgtgc gtcaccatca acaccgtggc cccggtctgt gtcgcgatcc ggtccagcag
      721 tcgcagcata tcggatttca gggcgggacc aagggccgag aagggctcgt ccagcagcag
      781 gatcgggcgc gcgcgcagca aaacgcgggc cagcgcgacc cgaccttgtt ggccgccaga
      841 cagattggcg gggcgtcgct gggccaggtc gggcaggccg acatcgcgca gcacttgtgt
      901 gacccggccc cgctgctcga ccgaaagccg cagatcggcc cgcagcccca gccccacatt
      961 ttgcgccacg ctgagatggg gaaacaggtt ctggtcctga aacaggaacg agaccgggcg
     1021 acggccgggc ggcagcgcat cgatattctg cccgttccag cggatatgcc cctgatcggg
     1081 tgacaggaac ccgccaatca gcgacagcag cgtggatttc cccgaacccg acgggccgag
     1141 gatcgcgacc cgcgcgccgc cgggcaccga cagatcggcc gacagggcga aatcgccgcg
     1201 actgatgcgg atcccgctaa gttcaagcaa ggcggcctcc gcggtcgaag gcccagaaca
     1261 gagcgaaact gattgccatc agcagcaccg cgcaggcgct ggcatcggcc atgcgatatg
     1321 aattcatcaa ttgatacagt ttcagcggca aggtcggttg atcggtggcg aacagggtga
     1381 tgacgccaag atcgcccatc gccagcgcgg cagccagccc tccggcaaag cccagcggcc
     1441 gggccagacg gggcagggtg agatagcgca gccgggcgag gccctgcatg tccagcgaat
     1501 cgcccagcct gccgtaatcg tcgcgcagcg cctgcgccgc cggaatcagc gcgcgcaggc
     1561 cgaaaggcag cgccatgatc gcgttgatga cgacggtgac gggcagggcc atcgccccgg
     1621 gcgcgaccca gccgcgcagc aggatgaaca accccgtgcc cagcaccagc ggcgaggcga
     1681 cgatcggcag catcccggcc gtctcgatcc agccggcccg accgtgcgcg atggccagcg
     1741 ccagggtcag gcacagcgcc agcgccagca cggccgaaac cagcgccatg atcaccgatc
     1801 gcagcgcggc ggcccagacc tcgggcggca gggcggggat gcggggtagg ccctgcaccg
     1861 tcacgccgat gatcggccac aacaggaaca gcgccgccag cgcgatcgac a
//
LOCUS       DTVW01000199            1127 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1267800, whole
            genome shotgun sequence.
ACCESSION   DTVW01000199 DTVW01000000
VERSION     DTVW01000199.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1127)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1127)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1127
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1267800"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..748
                     /locus_tag="EYO87_02670"
     CDS             <1..748
                     /locus_tag="EYO87_02670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020591421.1"
                     /note="catalyzes the formation of D-xylulose-5-phosphate
                     fro D-xylulose; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="xylulokinase"
                     /protein_id="HIC64904.1"
                     /translation="AGVVEPGRALLSLGTSGVYFVAGDAFRPGPERAVHAFCHALPGR
                     WHQMSVLLSAASCLAWVARLTGARDEAALLDEVAAAGRASDRLIFLPYLSGERTPHND
                     PNATGVFLGLDHRTDRAALGRAVLEGVAFAFADAEQALLASGSRIDRVSVIGGGARSS
                     LWGGILASVLDRPLVYRRGAEMGPALGAARLARLSERPSESPAQGCPELPEDFVARPD
                     ATLVEHYAERLARFRALYRRLRESFQEATP"
     gene            745..>1127
                     /locus_tag="EYO87_02675"
     CDS             745..>1127
                     /locus_tag="EYO87_02675"
                     /EC_number="5.3.1.5"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="catalyzes the interconversion of D-xylose to
                     D-xylulose; Derived by automated computational analysis
                     using gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="xylose isomerase"
                     /protein_id="HIC64905.1"
                     /translation="MTRPFFPEVDRIPYQGRDAQDDLAFRHYEPDRLVLGKRMGDQLR
                     FAACYWHSFGWPGSDVFGEGTFARPWLDDDASSGAEHKTDVAFEFFSKLGVPFFCFHD
                     RDAAPEAASFRESCARLDRIAERMAA"
BASE COUNT          139 a          426 c          397 g          165 t
ORIGIN      
        1 cgcgggcgtc gtcgagcccg gccgcgcatt gctctcactg ggaacctcgg gcgtctactt
       61 cgtggcgggc gacgccttcc gtcccggtcc cgaacgcgcg gtgcacgcgt tctgccacgc
      121 cctgcccggc cgctggcacc agatgtcggt gttgttgagc gcggcgagct gcctcgcctg
      181 ggtcgcccgg ctgaccggag cgcgcgacga ggccgcgctg ctcgacgagg tggcggccgc
      241 cgggcgcgca agcgatcggc tgatcttcct cccctacctg tcgggtgagc gcacgccgca
      301 caacgacccg aacgcgaccg gggtcttcct gggcctcgac cacaggacgg accgcgccgc
      361 actcggccgt gccgtactcg aaggcgtcgc gttcgcgttc gccgacgcgg agcaggcgct
      421 gctcgcctcg ggcagccgga tcgaccgcgt gtcggtgatc ggcggcgggg cgcgcagctc
      481 cctgtggggc gggatcctcg cgagcgtcct cgaccgcccg ctcgtctacc ggcgcggcgc
      541 cgaaatgggt cccgcgctgg gggccgcgcg cctcgcgcgc ctgtccgagc gcccttccga
      601 gagcccggcg cagggctgcc ccgagctgcc cgaggacttc gtggcgcgac cggatgccac
      661 gctcgtggaa cactacgccg aacggctcgc gcgcttccgc gccctgtatc gcaggctgcg
      721 ggagtccttc caggaggcca caccgtgacc aggcccttct tcccggaggt cgaccgcatc
      781 ccctaccagg ggcgcgacgc acaggacgac ctggcgttcc gccactacga gcccgaccgc
      841 ctggtgctcg gcaagcgcat gggggatcag ctgcgattcg ccgcctgcta ctggcacagc
      901 ttcggctggc cgggcagcga cgtgttcggc gagggcacgt tcgcaaggcc ctggctcgac
      961 gacgacgcca gctcgggcgc cgagcacaag accgacgtgg cgttcgagtt cttctcgaag
     1021 ctgggcgtcc ccttcttctg cttccacgac cgcgacgccg cgccagaggc tgcgagcttc
     1081 cgcgagagct gcgcgcgcct cgaccggatc gccgagcgca tggccgc
//
LOCUS       DTVW01000200            1133 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1268821, whole
            genome shotgun sequence.
ACCESSION   DTVW01000200 DTVW01000000
VERSION     DTVW01000200.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1133)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1133)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1133
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1268821"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>1133
                     /locus_tag="EYO87_02680"
     CDS             <1..>1133
                     /locus_tag="EYO87_02680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrB"
                     /protein_id="HIC64906.1"
                     /translation="NAVEYFVSYYDYYQPEAYVARSDTYIEKESQINEAIDRMRHSAT
                     RALLERDDVIIVASVSCIYGIGSVETYSAMTQDMVVGESYDQREFLGQLVAQQYRRLD
                     AAFQRGGFRVRGDVVEVWPAHLEDRAWRFDFFGNELESITEFDPLTGTRADTFRQIRI
                     YANSHYVTPRPTMQQAIKGIRKELHDRLKQLQDEGKLLEAQRLEQRTNFDLEMLEATG
                     VCNGIENYSRYLTGRAPGEPPPTLFEFIPDNAIVFADESHVSVPQIGGMYRGDFRRKF
                     TLAEHGFRLPSCMDNRPLKFEEWDAMRPQSVFVSATPATWEMDQTGGVFTEQVIRPTG
                     LLDPQIEIRPVEMQVDDLLDEVRRVTAAGYRTLVTTLTKRMAE"
BASE COUNT          229 a          365 c          354 g          185 t
ORIGIN      
        1 aacgcggtcg agtatttcgt cagctactac gattactacc agcccgaagc ctatgtcgcg
       61 cgcagcgata cctatatcga aaaggaatcg cagatcaacg aggcgatcga ccgcatgcgc
      121 cacagcgcca cccgcgcgct tctggaacgc gacgacgtga tcatcgtggc gtcggtcagt
      181 tgcatctacg gcatcggctc ggtcgagacc tattcggcga tgacgcagga catggtggtc
      241 ggcgaaagct atgaccagcg cgaatttctg ggccagcttg tcgcgcagca atacaggcgt
      301 ctggacgcgg cgttccagcg cggcggcttt cgcgtgcgcg gcgatgtggt cgaggtctgg
      361 cccgcccacc tggaagaccg cgcgtggcgg ttcgatttct tcggtaacga gttggagtcg
      421 atcaccgaat tcgaccccct gaccgggacc agggcggaca cgttccgcca gatccggatc
      481 tatgccaaca gccactacgt gaccccgcgc ccgaccatgc agcaggcgat caagggcatc
      541 aggaaagagc tgcacgaccg cctgaagcag cttcaggacg aaggcaagct gctggaggcg
      601 cagcggctgg aacagcgcac caatttcgat ctggaaatgc tcgaggcgac cggcgtctgc
      661 aacgggatcg agaattacag ccgctacctg accggccgcg cgccgggcga accgccgccc
      721 accctgttcg aattcatccc cgacaatgcc atcgtcttcg ccgatgaatc ccatgtcagc
      781 gtgccgcaga tcggcggcat gtatcgcggc gacttccggc gcaagttcac cctggccgaa
      841 cacgggttcc gcctgccatc ctgcatggac aaccggcccc tgaaattcga ggaatgggac
      901 gcgatgcgcc cgcaatcggt cttcgtcagc gccacccccg caacgtggga gatggaccag
      961 accggcggcg tcttcaccga acaggtgatc cgcccgaccg ggctcttgga cccgcagatc
     1021 gagattcggc ccgtcgagat gcaggtggac gatctgctgg acgaggtgcg ccgggtcacg
     1081 gcggcaggct atcgcacgct ggtcaccacg ctgaccaagc ggatggccga gga
//
LOCUS       DTVW01000201            1227 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1270037, whole
            genome shotgun sequence.
ACCESSION   DTVW01000201 DTVW01000000
VERSION     DTVW01000201.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1227)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1227)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1227
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1270037"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..348)
                     /locus_tag="EYO87_02685"
     CDS             complement(<1..348)
                     /locus_tag="EYO87_02685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RlmI/RlmK family 23S rRNA methyltransferase"
                     /protein_id="HIC64907.1"
                     /translation="MSDLAVIRLKPKAKPQAIRHGFPWVFADEAVLDRRTRAVAPGEF
                     AVLEDAERRPLALVTVNPASKIVARVMDADPAARIDAAWLRAKMARALAMRRRIYDAP
                     FYRLVHAEADGLPG"
     gene            549..>1227
                     /locus_tag="EYO87_02690"
     CDS             549..>1227
                     /locus_tag="EYO87_02690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphogluconate dehydratase"
                     /protein_id="HIC64908.1"
                     /translation="MKLHATIDRVTDRIRRRSQQSRDAYLKKIARAAEDGPRRAHLSC
                     GNQAHAYAAMDDKDDMATTRKPNIGVVTAYNDMLSAHQPYERYPDIIRRAGHAAGATV
                     QVAGGVPAMCDGVTQGRAGMELSLFSRDVIALATGVALSHDCFDAALYLGVCDKIVPG
                     LVIGAATFGHIPAVFIPAGPMPSGLPNDEKSKIRQQFAAGEVGRDALMAAEMASYHSP
                     GTCTFYGT"
BASE COUNT          218 a          442 c          376 g          191 t
ORIGIN      
        1 ccccggcaga ccatccgctt ccgcatggac cagccgatag aacggcgcat cgtagatccg
       61 ccgccgcatc gccagcgccc gcgccatctt cgcacgcagc caggccgcgt cgattcgcgc
      121 cgccggatcg gcatccatca cccgcgcgac gatcttcgag gccgggttga ccgtcaccag
      181 cgcaagcgga cgccgctcgg catcctccag cacggcaaat tcgcccggcg cgacggcgcg
      241 cgtgcgccgg tccagcaccg cctcgtcggc gaagacccac gggaaaccat ggcggatcgc
      301 ctgcggcttg gccttgggct tcagccggat cacggccaga tctgacatcg cgaacactcc
      361 tttgcggctg atctggcacg ggcttttgcg atgcacaagc gccggcccgg acttccgcgg
      421 gcaaatatcg cagagatcaa catcccggcg accggggccg cgccccctgc ccggccaccg
      481 gcggcacagg gattgaaccg ttaccgctaa cagcgtatag tcttgccaaa gccagaggag
      541 ttcgcccgat gaaacttcac gccaccatcg accgcgtcac cgaccgcatt cgtcgccggt
      601 cgcagcaatc ccgcgacgcc tatctgaaaa agatcgccag ggcggccgag gacggaccgc
      661 gtcgggcgca tctgtcctgc ggcaaccagg cccacgccta tgcggcgatg gacgacaagg
      721 acgacatggc gacgacccgc aaacccaata tcggcgtggt cacggcctat aatgacatgc
      781 tgtcggcgca tcagccctat gaacgctatc ccgacatcat ccgccgcgcg ggccatgcgg
      841 ccggggcgac cgtgcaggtc gcgggcggcg tgcccgccat gtgcgacggc gtcactcagg
      901 gccgggccgg aatggaactg tcgctgtttt cccgcgatgt gatcgcactg gcaaccggtg
      961 tggcgctgtc gcatgattgc tttgacgccg cgctttacct gggcgtctgc gacaagatcg
     1021 tgccgggtct tgtcatcggc gctgcgacct tcggccatat cccggcagtc ttcattcccg
     1081 ccgggccgat gccctcgggt ctgcccaacg acgagaaatc aaaaatccgc cagcaattcg
     1141 ctgccggcga ggtgggtcgc gacgcgctga tggcggccga gatggccagc taccattcgc
     1201 ccggcacctg caccttctac ggcaccg
//
LOCUS       DTVW01000202            4198 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1270064, whole
            genome shotgun sequence.
ACCESSION   DTVW01000202 DTVW01000000
VERSION     DTVW01000202.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 4198)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4198)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4198
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1270064"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            192..917
                     /locus_tag="EYO87_02695"
     CDS             192..917
                     /locus_tag="EYO87_02695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006468606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease activity regulator RraA"
                     /protein_id="HIC64909.1"
                     /translation="MSDYILSSETRAKLRKVSTASVATALYKRGLRNQFVQGVVPMER
                     KPVTMVGQAFTLRYIPAREDRNPLTVFRERDHKQRVAVETCPEGHVLVMDARKDRRAA
                     TAGSILVTRLGQRGVAGVVSDGGVRDAAAIAALDMPAYFACPSAPTNLTLHEAVDINV
                     PISCGDAPVFPGDVMLGDGDGVMVIPAHLADEIAEECTNMESYEDFVLEQVNAGAGII
                     GLYPATDDENLVKYDAWRERTGR"
     gene            919..2439
                     /locus_tag="EYO87_02700"
     CDS             919..2439
                     /locus_tag="EYO87_02700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008282009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase (NADP(+))"
                     /protein_id="HIC64910.1"
                     /translation="MTFIPHGNHLIAGARVGSEARFFSAPATGRGFEFSAGSAKLVAE
                     ACAAAHAAFPDFAATPREQRAKLLEAIAEEIEARGDQITEIGCMETGLPEARLQGERG
                     RTTGQLRLFAAHIRDGGYLDRRHDPALPDRKPLPRPDLRLMQRPVGPVAVFGASNFPL
                     AFSVAGGDTAAALAAGCPVVVKGHGAHPGTGEIVGDAIVAALEKLGMSAGIFSLVQGG
                     SRIVGEALVTDPRIKAVGFTGSLAGGRALYGLCASRPEPIPFFGELGSVNPMFVLPQA
                     AAARGADLGAGWAASLTMGAGQFCTNPGIAIVVDGKGADAFVQSAAEGLEGVAEQTML
                     TDGIADAYRNGVRRVSEGAGVRSLLTTSCQGRNAAPYLFEVSASEWMINQDLSEEVFG
                     PLGLVIRARDAAQMREVAESFKGQLTATLQMDDGDIELARDLLPVMERMAGRVLANGF
                     PTGVEVCDAMVHGGPYPASTNFGATSVGTLSIRRFLRPVCYQNLPEELLPDDLVNV"
     gene            2861..3825
                     /locus_tag="EYO87_02705"
                     /pseudo
     CDS             2861..3825
                     /locus_tag="EYO87_02705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009813523.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
     gene            4046..>4198
                     /locus_tag="EYO87_02710"
     CDS             4046..>4198
                     /locus_tag="EYO87_02710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009813524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter TctB
                     family protein"
                     /protein_id="HIC64911.1"
                     /translation="MLVKRPPLFLYVTLAVSVGYFISAVGLGAPVSESGLTPSFFPIL
                     VGGAAIV"
BASE COUNT          775 a         1236 c         1341 g          846 t
ORIGIN      
        1 caaccgcggc aatgctggcc aaccgaccgt caggttcaca ggcgtgtcgg agagccaggt
       61 caccgggcct ggcgcaggtg cggctgaaga gcagtcgatc gagttttttc ggccgttttc
      121 cctcgtgccg gagagcggag cggatttgcg aaaaccatgg ccgcaagggg ccagatgaca
      181 ggaatacgga tatgagcgat tacatcttgt cgagtgagac gcgcgcgaag ttgaggaagg
      241 tctcgacggc ctctgtcgcg acggctctgt acaagcgcgg tctgcgcaac cagttcgtgc
      301 agggtgtcgt gccgatggag cgcaagccgg tcacgatggt cggccaggcc ttcacgctgc
      361 gttatattcc cgcccgtgag gaccgcaacc cgctgaccgt gttccgcgag cgcgaccaca
      421 agcaacgtgt ggcggtcgag acctgtcccg aaggtcacgt gctggtgatg gatgcccgca
      481 aggacaggcg tgcggccacg gccggatcga ttctcgtcac ccgcctgggg caacgcggcg
      541 ttgccggcgt ggtctcggac ggaggtgtgc gcgacgcggc ggccatcgcg gccctggaca
      601 tgccggccta ctttgcctgt ccctcggcgc cgacaaacct taccctgcat gaggccgtgg
      661 atatcaacgt gccgatttcc tgcggcgatg caccggtctt tccgggcgac gtgatgctgg
      721 gcgacggtga cggcgtgatg gtgatcccgg cccatctggc cgacgagatc gcagaggaat
      781 gcacgaacat ggaatcctat gaggattttg tgctggagca ggtaaacgcg ggcgccggga
      841 tcatcggtct ctatccggcg acggacgacg aaaacctcgt gaaatacgat gcatggcgtg
      901 aacggacagg acgatagcat gaccttcatt ccacacggaa atcacttgat cgcaggcgcg
      961 cgggtcggct cggaggcgcg gttcttttct gctccggcaa ccggccgggg cttcgagttt
     1021 tcggccggtt ccgccaagct tgtggccgaa gcctgcgccg cggcccatgc ggcatttccg
     1081 gactttgccg ccaccccgcg cgagcaacgc gcgaagctgc tggaagcgat cgcagaagag
     1141 atcgaggcgc gcggcgacca gattaccgaa atcggatgta tggaaaccgg acttccggaa
     1201 gctcgcctgc agggcgagcg cggccggacc accggtcagt tgcgcctttt cgctgcccat
     1261 attcgtgacg gcgggtatct cgatcgtcgc catgacccgg ccttgcccga tcgcaaacct
     1321 cttccccgtc ccgatctgcg gttgatgcag cgtccggtgg gcccggtcgc ggtcttcggc
     1381 gcatccaatt ttccgctggc attctcggtg gccggtggtg ataccgccgc cgcgctggcc
     1441 gcagggtgcc cggtcgtcgt caaaggtcac ggcgcgcatc cgggcacggg cgaaatcgtc
     1501 ggtgacgcga tcgttgcggc gcttgaaaag cttggcatga gcgcgggtat cttcagcctc
     1561 gtccaggggg gcagtcgtat cgtgggcgag gcgcttgtca cagatccgcg gatcaaggcc
     1621 gtgggcttca ccggcagcct tgccggcgga cgcgcactct atggtctttg cgcatcgcga
     1681 ccagaaccga ttccgttctt cggcgagctt ggcagcgtca accccatgtt cgtcttgccg
     1741 caggccgctg ccgcccgggg tgcggatctg ggggcgggat gggcggcgag cctgaccatg
     1801 ggcgccgggc agttctgcac caatcccggt attgccatcg tggttgacgg gaagggcgcc
     1861 gatgctttcg tccaatccgc ggccgagggc ctcgagggcg tggcagagca gaccatgctg
     1921 acggacggga tcgccgacgc ctatcgcaat ggcgtccgcc gggtgtcgga aggcgcaggg
     1981 gtcagatcgc tgctgaccac atcctgtcaa ggtcggaatg ccgcaccgta tcttttcgaa
     2041 gtttcggcca gcgagtggat gatcaaccag gatctgtcgg aagaagtgtt cggaccgttg
     2101 ggactggtca tccgggcaag ggacgcggcg cagatgagag aggtggccga aagcttcaag
     2161 ggacaactga ccgcgacgct tcagatggat gatggtgata tcgaacttgc ccgggacttg
     2221 ttgccggtga tggagcgaat ggccggtcgt gttctggcca atggatttcc gaccggcgtc
     2281 gaggtctgcg acgccatggt tcatggaggt ccgtatccgg ccagcacaaa ctttggcgcc
     2341 acctctgtcg gcacactttc catccgccgc ttcctgcggc ctgtgtgcta ccagaacctt
     2401 cccgaagaac tgttgccgga cgacctggtg aatgtctgac ctggcaggtc acggccccac
     2461 cgacccgtca ccacgccttc gtgattggcg ggtcgatctt tcgagttcgg tcgccgggct
     2521 ctgctgaagc ctcttgtggc gttgtcacgc cgcgatccgg ccgatggcgg tgatcggcgg
     2581 gccttgcagc ttttgccaat gcccgccgcg ctggtcgaag cagcctgtca atttgtatat
     2641 attatataca gatttctgct tacaccccgg aataatcggc ctttatcgat gatttttccg
     2701 ttgagttgta ataattagtt agtatgatgg gcagagttct tgggggcaag tctactgcgc
     2761 cgaaggcgac gatcggcgga agcacgggtt cgtgtgtgag gatgttccag ccgagcgttc
     2821 cactcgcgat cccatcaaat ttctggagga ggaacaggtc atgttttcga aaagcttgaa
     2881 aagcagaata atcttggcac ttggtgcctg catcatcggc acctcggcag tcgcggcgga
     2941 atttcccacc cgtgatatcc gcctgatcgt tccgtggccc gccggcggcg gtgctgattc
     3001 gatttcgcgc aagatcggca acatcgccga gcaagacctg ccgaaatcga tctatgtcga
     3061 gaacatcgcc ggcgccctga ccgcgactgg tctgattcag atgacgaatt cgcgtcctga
     3121 cggatatacg gtcggggtcc tgacctatga cagcgtcatc accttgccgc gcggcagatg
     3181 gtgcccggct attccctgga caacatgacg ccgatcgccc gcatcacgac cgaagccgat
     3241 gcgatcgtcg tttcaaaaag ctccggtatc gacagcttcg aggaactggt cgaagcggcc
     3301 aaggcgaagc ctggaaccgt gcgtgtcggc gtcgctccga aaggatcggg tccgtatctg
     3361 tcggtcatcc agctcgaaaa gctgctggaa gtcgatttca acgtgatcac ctatgccgga
     3421 tcttccagcg cggaggcaga agcccttctg tcgggcgaac tcgatgcagc gatttccagc
     3481 ctgggcgatt tcagcggcat catttcgtcg ggtgatgcca aaggcgtggt cgaactgacc
     3541 tcggtgcaaa acatgaccta tacggacgtg ccaacgatca gctccaaggg ttacgacctg
     3601 caaaccggca gcttcatcat tctggcagcg ccgaaagaca cgcccgaaga ggccgtcacg
     3661 acgctcgaaa ccgtgttcaa gacggcctat gacagccaag aatttcagga ttggctgaaa
     3721 caggttgggg ttactccgga ttggctcggc tctgacgagg tcaagatctg gatgggcgaa
     3781 cttcaggaca agacgttcaa gctcatggac gaactggacc tctgatcctt gcagggaccc
     3841 aagcctccga tctggtatcg gagacttggg cccggccgag gcttgccgtg gcggtggagg
     3901 atgtcgcccg aaccaacgac gtcatcccat gctggcaacg cggcgggttg gcgcatccgt
     3961 gatccaacga ttttcttcat acctgaacgc atgggcaggc gctttgcgcc gacgcgccgt
     4021 tccaccccca gtcccggaga agacgatgct cgtgaaaagg cccccgctat ttctctatgt
     4081 cactcttgca gtgtctgtcg gatacttcat ttccgcggtc ggtttgggtg cgcccgtatc
     4141 cgaaagcgga ttgacgccct cgttctttcc catcctggtg ggaggcgccg caatcgtc
//
LOCUS       DTVW01000203            6223 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1272649, whole
            genome shotgun sequence.
ACCESSION   DTVW01000203 DTVW01000000
VERSION     DTVW01000203.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 6223)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6223)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6223
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1272649"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..209
                     /locus_tag="EYO87_02715"
     CDS             <1..209
                     /locus_tag="EYO87_02715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011750274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="YitT family protein"
                     /protein_id="HIC64912.1"
                     /translation="LGGIGIVGLYIQDATGFRAGWVQMAFDAALFLIALSLRDPITVA
                     WSFLGAVVLNLVIAINHRRDRYIV"
     gene            complement(264..1088)
                     /locus_tag="EYO87_02720"
     CDS             complement(264..1088)
                     /locus_tag="EYO87_02720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64913.1"
                     /translation="MRRIQLGTSAVILALMGAIGTGALAQDQAPDPAQSSPQTQLPQV
                     LGALNLTDIATREARHGGNRIEGNLPGGGEIQAVIDESGNLVMVDVDDAAMPQSLIDA
                     MLPQSVRDNAVFGQFATIGKLATMDSRVMIGGEDADGEDLRAGFDAEGRLLRFGREDG
                     DGRRFGRGPERGEHGGKDESRKGRGPGMMGGHDGDREGPRGGDRRGERPGEGPGRAPM
                     MDRAAIDKVLGDAGYTDLAQPRRAGPRFALDATNPAGEQVTLEIDAKGDILRETAR"
     gene            1218..1574
                     /locus_tag="EYO87_02725"
     CDS             1218..1574
                     /locus_tag="EYO87_02725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64914.1"
                     /translation="MRRNVLPLLLIAILSLGAGFSLPLARQPAAMAQDFQPLPFDRLA
                     RRVSDRYAGRLVGAEIRRPSPREHELGAALVYEFRLLAPEGNLLRIRLDARTGRFLEV
                     AGRGQLQALRRGKDRP"
     gene            1599..2261
                     /locus_tag="EYO87_02730"
     CDS             1599..2261
                     /locus_tag="EYO87_02730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018001232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HIC64915.1"
                     /translation="MRALIVEDDPVLSGQLSQAMKDAGFVTDHAGDGEAGEFLGATEC
                     YDVAILDLGLPGLSGIEVLTRWREQGIHMPVLILTARGDWTDKVAGFRAGADDYAVKP
                     FRLDEVVLRARTLIRRAAGHARSVIAAGPLRLDSQLGVITRDGVALKLTAFEARILSY
                     LIHHQNRVVSRTELSDHLYEADTDRDFKSIEVVIGRLRRKIGDGLIQTRRGEGYVLRA
                     LP"
     gene            2258..3592
                     /locus_tag="EYO87_02735"
     CDS             2258..3592
                     /locus_tag="EYO87_02735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010398400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing histidine kinase"
                     /protein_id="HIC64916.1"
                     /translation="MMRSIRGRLLVLAAVWLGAALLAAFLVISNLLDDFVTDRFDAET
                     RAAADSLIAGLEVGADNRIAVATPPADARFGLPFSGWYWQVAADGRAVARSPSLLDGR
                     LQGPPGSYAGRPGRGADGAHLRVSRQELTIPDSDARVAVTVTAPADEIRASLRQIRRP
                     LAISLAILGLGLAGGTVVQVAVGLRSLDSLGTDLRRVREGRTHRLPLPDVSELRPLTA
                     EINAALDQNATLLARSRRHLGNLAHSLKTPLAALANDLPGDHRGQALIARMDRLIGWH
                     LRRARAAQPATLGQRTAIAQVIDDILIVLRHPMADKGMTARILDPAAAAADFFGERQD
                     LEEMIGNLAENAVKWGRSCLVFRISAGQGRVLIAIEDDGPGMAETDAPRALIRGARLD
                     ETGPPGAGLGLAIVADLAALHGGELRLERAPTGGLAAILDLPGSIRDATRAG"
     gene            3664..4998
                     /locus_tag="EYO87_02740"
     CDS             3664..4998
                     /locus_tag="EYO87_02740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008029728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HIC64917.1"
                     /translation="MSQARLSPGIVPGRLAPEDLALNFRDIAPPLTAHEAQVAADRCY
                     FCHDAPCITACPTAIDIPLFIRQIATGTPDAAAMTIFHANILGGMCARVCPTENLCEG
                     ACVRMEAEGRPVEIGALQRHATDGLMARPGHPFRRGAPTGRRIAVVGAGPAGLSCAHR
                     LAAKGHEVVIFEARDKPGGLNEYGIASYKTVDGFAQAEIEWLLGIGGITIETGKALGR
                     DLTLEGLTADYDAVFLAIGLGATNALRTGDEGIGNVGDAVDFIAELRQAADLAGLAVG
                     RDVVVIGGGMTAIDAAVQSKLLGAENVTMVYRRGQDRMTASRHEQDHASASGVRIIHN
                     AAPVAIHGDGAVAEVEFCYTEDSPEGLVMTDQRFRLKADQLFRAIGQRLDEAPGSPAL
                     EGGKIAVTGPGRTSLDKVWAGGDCAAGGDDLTVTAVAQGRDAAEDIHLSLSP"
     gene            5174..>6223
                     /gene="preA"
                     /locus_tag="EYO87_02745"
     CDS             5174..>6223
                     /gene="preA"
                     /locus_tag="EYO87_02745"
                     /EC_number="1.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_353259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent dihydropyrimidine dehydrogenase
                     subunit PreA"
                     /protein_id="HIC64918.1"
                     /translation="MADLRSDFIGIKSPNPFWLASAPPTDKEYNVRRAFQAGWGGVVW
                     KTLGSEGPPVVNVNGPRYGVIHGNDRRVLGLNNIELITDRPLEVNLREIKQVKRDYPD
                     RALVISLMVPCDEDSWRRILSQIEDTGADGVELNFGCPHGMSERGMGSAVGQVPDYIE
                     MVTRWVKQYSRMPCIVKLTPNITDICKPAEAARRGGADAVSLINTINSITSVDLDLFA
                     PQPTIDGKGAHGGYCGPAVKPIALSMVSEIARGADTRGLPISGIGGITTWRDAAEFMA
                     LGAGNVQVCTAAMTYGFKVVQEMISGLSEYMDEKGMTSVDEIVGRAVPNVTDWNQLNL
                     NYVAKAHIDQDACIKC"
BASE COUNT         1003 a         2060 c         2106 g         1054 t
ORIGIN      
        1 cgctgggcgg gatcgggatc gtcgggctct acattcagga cgcgaccggg ttccgcgcgg
       61 gctgggtgca gatggcgttc gacgcggccc tgttcctgat cgcgctgagc ctgcgcgacc
      121 cgatcactgt cgcctggagt tttctggggg cggtggtcct gaacctggtg atcgcgatca
      181 atcaccggcg cgaccgttat atcgtttgac gcctctatca tcgaatggcg cggcggcccc
      241 cgtcgggacc gccgcttcat gtcctagcgc gcggtttcgc gcaggatgtc gcccttggcg
      301 tcgatttcca gcgtgacctg ttcgcccgcg ggattggttg catccagggc aaagcgcgga
      361 ccggcgcggc ggggttgggc cagatcggtg tagcccgcat cgcccagcac cttgtcgatc
      421 gccgcgcgat ccatcatcgg cgcccggccc ggcccctcgc cggggcgttc accgcgacga
      481 tcaccgccgc gcggaccttc cctgtcgccg tcatggccgc ccatcatgcc cgggccgcga
      541 cccttacgtg attcgtcctt gccgccgtgc tcaccgcgtt ccggaccgcg cccgaaacgc
      601 cggccgtcac catcctcgcg gccaaagcgc aacagccggc cctcggcgtc gaaacccgcg
      661 cggagatcct ctccatccgc atcctcgccg ccgatcatca cgcgcgaatc catcgtggcc
      721 agcttgccga tcgttgcgaa ctggccgaaa accgcattgt cgcgcacgct ctgcggcagc
      781 atcgcgtcga tcagcgattg cggcatcgcg gcgtcgtcca catcgaccat gacgagattg
      841 ccgctctcgt cgatgacggc ttggatctca ccgcctccgg gcaggttgcc ctcgatgcgg
      901 ttgccgccgt gccgggcctc gcgcgtcgcg atgtcggtca ggttcaacgc gcccaaaacc
      961 tgcggcagct gcgtctgcgg actggattgc gcagggtcgg gggcctggtc ctgcgccaac
     1021 gcgccggtgc cgatcgcgcc catcagcgcc aggatcacgg cagaggttcc cagttgaatt
     1081 cttctcatcg tctttccttt cgtcaactct ccggcctttg catggccggg acgaatcggt
     1141 tctaggacaa tcatgccgaa ccaaggacca accggccatt tggtttccat tgggtggcaa
     1201 gtcggcatag atgatccatg cgccgcaatg tcctgcccct gctgctgatc gccatcctgt
     1261 ccctcggggc cggtttttcc cttcccctcg cccgccagcc cgccgcgatg gcgcaggatt
     1321 ttcagccgct gcccttcgac cgtctggccc ggcgcgtcag cgaccgctat gccggccgcc
     1381 ttgtcggggc cgagattcgc cgccccagcc cccgggaaca cgaattgggt gcggcgctgg
     1441 tctatgaatt ccgcctgctc gcgcccgaag gcaaccttct gcgaatccgg ctggatgccc
     1501 gcaccggtcg ttttctggaa gtggccggtc gcggacaatt gcaggcgctg cgtcgcggca
     1561 aggaccggcc ctagctgaca gatgatgacg aggattgaat gcgcgcgctg attgtcgagg
     1621 atgacccggt tctgtccggg cagctttcgc aggcgatgaa ggatgcgggc tttgtgaccg
     1681 atcatgccgg cgacggcgag gccggagagt ttctgggcgc gaccgaatgc tatgacgtgg
     1741 cgatccttga tcttggcctg ccgggcctgt cggggatcga ggttctgacc cgctggcgcg
     1801 aacagggaat ccacatgccg gtgctgatcc tgacggcgcg cggcgactgg accgacaagg
     1861 tcgcgggctt tcgcgcgggc gccgacgatt atgccgtcaa gcccttccgc ctggacgagg
     1921 tcgttttgcg cgcgcgaacc ctgatccggc gcgcggccgg tcatgcccgc tccgtgatcg
     1981 ccgcaggccc gctgcggctg gacagccagt tgggcgtcat cacccgcgac ggcgtggcac
     2041 tgaaactgac cgccttcgag gcgcgcatcc tgtcctatct gatccaccac cagaatcgcg
     2101 tcgtcagccg gaccgaattg tcggaccacc tctacgaggc cgataccgat cgcgacttca
     2161 agtcgatcga ggtcgtgatc ggccgccttc gccgcaagat cggcgacggc ctgatccaga
     2221 cgcggcgggg cgagggctat gtcctgcggg cgctcccatg atgcgctcga tccgggggcg
     2281 actgctggtt ctggcggcgg tctggcttgg ggcggccctg ctggcggcgt tcctggtcat
     2341 ctcgaatctg ctggacgatt tcgtcaccga ccgtttcgac gccgaaacga gggcggctgc
     2401 ggattcgctg atcgccggac tcgaggtcgg cgccgataac cggattgcgg tcgcgacgcc
     2461 gcccgccgac gcccgcttcg gcctgccctt cagcggctgg tattggcagg ttgcagcgga
     2521 cggccgggcg gtggcgcgat cgccttcgtt gctggacggg cggcttcaag gcccgccggg
     2581 cagctatgcc ggccggccgg gacgcggcgc ggatggcgcc catctgcggg tgtcgcggca
     2641 agaactgacc atccccgaca gcgatgcccg cgtcgccgtg accgtcacag cgccggctga
     2701 cgaaatccgc gccagcctgc gccagatccg gcgccctctg gcgatttcgc tggcgatcct
     2761 gggtcttggg ctggcggggg gcaccgtcgt tcaggtggcc gtcgggctgc gcagcctcga
     2821 ttcgctgggc accgatctgc gtcgggtgcg cgagggccgg acccatcgcc tgcccctgcc
     2881 cgacgtctcg gaactgcgcc ccctgacggc cgagatcaac gccgcgctgg accagaacgc
     2941 caccctcctg gcgcggtcgc ggcggcatct gggcaatctg gcccattcgc tgaaaacgcc
     3001 gctggcggcg ctggccaacg atctgccggg cgatcatcgc ggacaggcgc tgatcgcgcg
     3061 catggaccgg ctgatcggct ggcatctgcg gcgcgcccgt gcggcccagc ccgcgaccct
     3121 gggacagcgc accgcgattg cccaggtgat cgacgacatc ctcatcgtgc tgcgtcaccc
     3181 gatggccgac aagggcatga ccgcgcggat cctggaccct gccgctgccg ctgccgactt
     3241 cttcggcgaa cggcaggatc tggaagagat gatcggcaac ctggccgaga acgcggtgaa
     3301 atggggccgc tcatgtctgg tctttcgcat cagcgcagga caagggcggg ttctgatcgc
     3361 catcgaggat gacggccccg gcatggccga aaccgacgcg ccgcgcgcgt tgatccgcgg
     3421 tgcgcgactg gacgaaacag gccctcccgg cgccggcctg ggccttgcca tcgtcgccga
     3481 cctggccgcg ctgcacggcg gcgagttgcg gcttgaacgg gcgccgacgg gcggattggc
     3541 ggccatcctg gaccttccgg gctcgatccg ggacgcgact cgggcgggtt gattttacca
     3601 tttgataaaa aaacgcatct gtgccagcct gaacctgacc aacaggtgag ccaggagaca
     3661 cgaatgtccc aagccaggtt gtcgccaggc atcgtcccgg gccgtcttgc gcccgaggat
     3721 ctggcgctga atttccgcga cattgccccg cctctgaccg cgcacgaggc acaggtcgcc
     3781 gccgatcgct gttatttctg tcacgacgcg ccctgtataa cggcctgtcc caccgccatc
     3841 gacattccgc tgttcatccg ccagatcgcg accggaacgc cggatgcggc ggcgatgacc
     3901 atcttccacg ccaatatcct gggcggtatg tgcgcccgcg tctgcccgac cgaaaacctg
     3961 tgcgagggcg cctgcgtcag gatggaggcc gagggcagac cggtcgagat cggcgcgctg
     4021 cagcgccacg ccaccgatgg gctgatggcc aggccgggcc atccgttccg gcggggcgcg
     4081 ccgaccggca ggcggatcgc cgtcgtcggc gcgggacctg cgggcctgtc ctgcgcgcat
     4141 cggctggcgg ccaagggcca tgaggtcgtg atcttcgagg cgcgcgacaa gcccggcggt
     4201 ctgaacgaat acggcatcgc cagctacaag accgtggacg gctttgccca ggcggaaatc
     4261 gaatggctgc tgggcattgg cgggatcacc atcgagaccg gcaaggccct tggccgcgat
     4321 ctgacactgg aaggtctgac ggcggactac gacgcggttt tcctggcgat cggccttggc
     4381 gccacgaacg ccctgcggac cggcgatgaa ggaatcggca atgtcggcga cgcggtggat
     4441 ttcatcgccg aactgcggca ggccgcggat ctggccggcc tggccgtcgg ccgggatgtc
     4501 gtggtgatcg gcggcggaat gaccgcgatc gatgccgccg tgcagtcgaa actgctgggg
     4561 gccgaaaacg tgaccatggt ctatcggcgc gggcaggacc ggatgaccgc cagccggcac
     4621 gaacaggatc atgccagcgc atccggcgtg cgcatcatcc acaacgccgc gccggtggca
     4681 atccatggcg acggcgctgt cgcagaggtg gaattctgct ataccgagga cagtcccgaa
     4741 ggtctggtca tgaccgacca gcgattccgg ctgaaggccg accaattgtt tcgcgccatc
     4801 ggacagcggc tggacgaggc gcccggatcg ccggcgctgg agggcggcaa gatcgccgtc
     4861 accggccccg gccggaccag cctcgacaag gtctgggcgg gcggcgactg cgcggccggc
     4921 ggcgacgacc tgacggtgac ggcggtggcc cagggccgcg acgccgcgga agatattcac
     4981 ctgagcctgt cgccatgacg gaaggaccgg ccatgatcga gaaaccgtct tttcgtctat
     5041 ggcctgctgc ggggtggggt cacgatgatc cggctgctgc cggaccgcgc ggccaagaca
     5101 aggattgccc catcgaccgc aaatagctga aataggcccg gcccgtctgg cccgttggaa
     5161 ggaaggacaa gcgatggctg atctgcgcag cgactttatc gggatcaagt ctcccaatcc
     5221 gttctggctg gcctcggccc cgcccaccga caaggaatac aacgtccgac gggcctttca
     5281 ggccggatgg ggcggggtcg tgtggaagac attgggcagc gagggaccgc ccgtcgtgaa
     5341 cgtcaacggc ccgcgatacg gcgtgatcca tggcaatgac cggcgggttc tgggcctgaa
     5401 caacatcgaa ctcatcaccg accgcccgct ggaggtgaac ctgcgcgaga tcaagcaggt
     5461 caagcgcgac tatcccgatc gggcactggt catcagcctg atggtgccct gcgacgagga
     5521 tagctggcgc aggatcctga gccagatcga ggataccggc gccgacgggg tcgaactgaa
     5581 tttcggctgc ccgcacggga tgtccgaacg cggcatgggc agcgcggtcg gacaggtgcc
     5641 ggactatatc gagatggtga cacgctgggt caagcaatat tcgcggatgc cctgcatcgt
     5701 gaagctgacg ccgaacatca ccgatatctg caaaccggcc gaggctgccc ggcgcggcgg
     5761 ggccgacgcg gtcagtctga tcaacacgat caacagcatc acctcggtcg atctggatct
     5821 gttcgcgccg cagcccacga tcgacggcaa gggtgcgcat ggcgggtatt gcgggccggc
     5881 agtcaagccg atcgcgctga gcatggtgtc ggaaatcgcg cgcggcgcgg acacgcgcgg
     5941 gctgccgatc agcggcatcg gcggtatcac gacctggcgc gacgcggccg aattcatggc
     6001 gctcggggcg ggaaatgtgc aggtctgcac ggcggcgatg acctatggct tcaaggtggt
     6061 ccaagagatg atctcgggcc tgtcggagta tatggacgag aagggcatga cctcggtcga
     6121 tgagatcgtc ggccgtgcgg tgcccaatgt caccgactgg aaccagttga acctgaacta
     6181 tgtcgccaag gcgcatatcg accaggacgc ctgtatcaaa tgc
//
LOCUS       DTVW01000204            2560 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1273706, whole
            genome shotgun sequence.
ACCESSION   DTVW01000204 DTVW01000000
VERSION     DTVW01000204.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2560)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2560)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2560
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1273706"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(17..598)
                     /locus_tag="EYO87_02750"
     CDS             complement(17..598)
                     /locus_tag="EYO87_02750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008226208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
                     /protein_id="HIC64919.1"
                     /translation="MVVGRCAWCGTDPLYVAYHDTEWGVPERDARALWEKLVLDGFQA
                     GLSWITILRKRDNFREEFEGFDPERVAGWDEARIARALQNPGIIRHRGKIAATVKGAR
                     LFLQIEAAEGFAPFLWSFTGGGPILNRFETSAEVPTATPESIAMSKALKKRGFNFCGP
                     VITYAFMEATGMVNDHVTTCHRHAAITRMSVRE"
     gene            738..1508
                     /locus_tag="EYO87_02755"
     CDS             738..1508
                     /locus_tag="EYO87_02755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018000025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HIC64920.1"
                     /translation="MDQQSRITLPAVRLAVEKGNGVLAYQPIVQAAQPGRPAFYEGLI
                     RIIDDSGRIVPLRDFMPVAETTELGRQIDCLSLSLGLQALAEDPCLRLSVNMSARSIG
                     YPDWIRTLRDGISADPHMGERLILEITESSAMGMPDQVRNFMREVQRHGISLALDDFG
                     AGYTSFRYLRDFCFDMIKIDGQFIREIAEHPDNQVLTRALMSIAHHFDMFTVAESVET
                     AEDASFLIDSGIDCLQGYYFGAPTIAPPWKTPPSVARR"
     gene            2070..>2560
                     /locus_tag="EYO87_02760"
     CDS             2070..>2560
                     /locus_tag="EYO87_02760"
                     /EC_number="2.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_353824.2"
                     /note="Catalyzes the synthesis of acetoacetyl coenzyme A
                     from two molecules of acetyl coenzyme A. It can also act
                     as a thiolase, catalyzing the reverse reaction and
                     generating two-carbon units from the four-carbon product
                     of fatty acid oxidation; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acetyltransferase"
                     /protein_id="HIC64921.1"
                     /translation="MTKAVIVSAARTPVGSFLGSFANIPAHDLGSAVLKEVVSRAGID
                     PAEVSETILGQVLTGGQGQNPARQAHINAGLPQESAAWLINQVCGSGLRAVALAAQQV
                     MLGDATIVLAGGQESMSLATHAAYLRAGQKMGDVKMVDTMIRDGLWDAFNNYHMGQTA
                     ENVA"
BASE COUNT          468 a          824 c          827 g          441 t
ORIGIN      
        1 gatgccgcga aacaggtcat tcgcgaactg acatccgagt gatcgccgcg tggcggtgac
       61 aggtggtgac gtgatcgttc accatccccg tcgcctccat gaaggcatag gtgatgaccg
      121 gaccgcagaa attgaagccg cgtttcttca gcgcctttga catcgcaatc gattcgggcg
      181 tggcggtcgg cacctcggca gaggtctcga aacggttgag gatcgggccg ccgccggtaa
      241 aggaccacag gaagggcgcg aatccctcgg ccgcttcgat ctgcagaaac aggcgggcgc
      301 cctttacggt cgccgcgatc ttgccgcgat gacggatgat tcccggattc tgcagtgccc
      361 tcgcgatccg cgcctcgtcc cagccggcca cacgttcggg gtcgaaaccc tcgaattcct
      421 cgcgaaaatt gtcacgcttg cgcaggatgg tgatccagct cagcccggcc tgaaaaccgt
      481 ccaggaccag cttttcccac aaggcccgcg catcgcgttc gggtacgccc cattcggtat
      541 cgtgataggc gacgtagagc ggatcggttc cgcaccaggc acagcgcccc acaaccatag
      601 cgttaaccct gactccagaa atcgctgcga attcatctca ggttaagaca tcatgggcaa
      661 agtgcaacaa acgaccgaag acgaggcttg acgtgaagga aggcacccca cccagaggat
      721 cgccgctgga ctatgcgatg gatcagcaaa gccgcatcac gctgcccgcc gtgcgcctgg
      781 cggtggaaaa gggcaatggg gtccttgcct atcagccgat cgtgcaggcc gcccagccgg
      841 gtcggccggc cttctacgaa gggttgatcc gcatcatcga cgacagcggc cggatcgtgc
      901 cgctgcgcga cttcatgccg gtggccgaaa cgaccgaact gggccgccag atcgattgtc
      961 tgtccctgtc gctgggcctt caggccctgg ccgaggatcc ctgcctgcgc ctctcggtca
     1021 acatgtcggc acgctcgatc ggctatcccg actggattcg gacgctgcgc gacggaattt
     1081 cggccgatcc gcatatgggc gagcggctga ttctggagat caccgaaagc tcggccatgg
     1141 ggatgcccga tcaggtccgg aatttcatgc gggaggtgca gcggcacggg atcagcctgg
     1201 cgctggatga tttcggcgcg ggctatacct cgttccgcta tctgcgcgat ttctgtttcg
     1261 acatgatcaa gatcgacggg caattcatcc gcgagatcgc cgagcatccg gacaatcagg
     1321 tgctgactcg cgcgctgatg tccatcgcgc atcatttcga catgttcacc gtcgcggaat
     1381 cggtggaaac ggccgaggat gcaagctttc tcatcgacag cggcatcgac tgcctgcagg
     1441 gctattattt cggcgccccg acgattgcgc caccctggaa gactccgcct tcggtggcgc
     1501 gccgctgagg ccgtcgtgcg ggtatccggc aatccgaaca cggatcgcat ggatcgcgat
     1561 ccggccggga caccgccgga aaacgcgcgc gccccgggca cagcccggcg cggtcgcttc
     1621 cgccgggccg cgcattgcgc gaccggtggc gccgcctaga ccctgtgacg ccgcgcagac
     1681 agagtaaccg tcggcgccgt cggtcgccct gatcgggccc gtgtcaggcc aagggctcga
     1741 acggcgcaat tgcggccaga aggcggagac atcatggagg agatttcgga tcggagatcc
     1801 catcgcgcaa agcgaaggcc ggtcaatccg ggattcggcc tgcgcggcgg tgccgatctt
     1861 ctgggcgggg cggaggtcgc ccgggtctgc aaggcgccca tgggatcgcg gaaaactggg
     1921 gcccgccagg cgtcatttcg cgtcgcgccg cccccctccg ggctgccagc aggcgcgcgc
     1981 cgggacccga tctgcttgac ctgacggtac gaacccgcat cctagcctcg attcgccgca
     2041 attccggcgc tgatgggaag gagcccgcca tgaccaaagc cgttatcgtt tccgccgccc
     2101 gcacgccggt cggcagcttt ctgggatcgt ttgccaacat tccggcccac gatctgggct
     2161 cggccgtcct gaaagaggtc gtttcccgcg ccgggatcga ccccgccgag gtcagcgaaa
     2221 ccattcttgg tcaggtgctg accggcggtc agggtcagaa ccccgcccgt caggcgcata
     2281 tcaatgccgg cctgccgcag gaatcggccg cctggctgat caatcaggtg tgcggatcgg
     2341 gtctgcgggc ggtggctctg gccgcccagc aggtcatgct gggcgatgcg acgatcgttc
     2401 tggcgggcgg ccaggaaagc atgtcgctgg caacgcacgc ggcctatctg cgggccgggc
     2461 agaagatggg cgacgtgaag atggtcgata cgatgatccg cgacggcctg tgggacgcct
     2521 tcaacaacta ccacatgggc cagaccgccg agaacgtggc
//
LOCUS       DTVW01000205            1594 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1275643, whole
            genome shotgun sequence.
ACCESSION   DTVW01000205 DTVW01000000
VERSION     DTVW01000205.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1594)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1594)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1594
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1275643"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1594)
                     /locus_tag="EYO87_02765"
     CDS             complement(<1..>1594)
                     /locus_tag="EYO87_02765"
                     /inference="COORDINATES: protein
                     motif:HMM:PF03706.11,HMM:PF09924.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="lysylphosphatidylglycerol synthetase family
                     protein"
                     /protein_id="HIC64922.1"
                     /translation="ALIFYDWFGLRFIGKRLDRGIVALGGFLGYAFGNTIGVSVVSGG
                     AVRYRIYSAVGLNAFEVAAVSGYIALALGTGLTLLGVVALAINPGAIGAYLPYAPGTI
                     QMVAGTIAAVSVLMIGWMSATQRSLAIRGHRLRLPPPADLAGQLVVTLIDVAAASFAL
                     WILLPAGKPDYASFVAVYAAATMLGVLSHVPGGIGVFETVVIGTLPASVPVGDAAAAL
                     LLFRLIYYLVPFALAFVLVGLNEARLASGLGSRLVGRAPGMQPALATLRGFSPGLVAV
                     VAFGFGAYLLLVTMLPSVRANAIAEGDLVGAVLLEGGTIASAVAGIALIIVSHGLARR
                     VSSAWWFAIGALLAGSVASLLNDFGYENAAFLAFGALLLLPFRKAFDRPGRLTAGVFE
                     PRWFATVVGVGLAAATFFFFVHKAVPYSNDLWSEFSRSSNTPRALRAGLVATALMFFF
                     GIYLLTRPVGHTPPRDADAETLSRAARLCGEAQDPQCWLGQTGDKRFLFSESGNAFVM
                     YGVRGRSWIVLGDPVGDPDEFEA"
BASE COUNT          345 a          542 c          526 g          181 t
ORIGIN      
        1 gcctcgaatt cgtccggatc gccaaccgga tcgccgagca cgatccagga tcgtccgcga
       61 accccataca tgacgaaggc attgccggat tcggaaaaca ggaaccgctt gtcgccggtc
      121 tggccaagcc agcattgcgg atcctgggcc tcgccgcaca atcgggccgc gcgcgacagg
      181 gtttcggcat cggcatcgcg cggtggtgta tggccgacgg gccgggtcag cagatagatc
      241 ccgaagaaga acatcagcgc cgtcgccacc agcccggccc gcagcgcccg cggcgtgttc
      301 gagcttcgcg agaactcgga ccagaggtca ttggaatagg gaaccgcctt gtgcacgaaa
      361 aagaagaaag ttgccgccgc aaggccgacg ccgacgaccg tcgcgaacca gcgcggctcg
      421 aacacgcccg ctgtcagccg gccggggcga tcgaaggcct tgcggaacgg caacagcaaa
      481 agcgcgccga aggccaggaa ggccgcattc tcgtaaccga aatcgttgag cagcgaggca
      541 acggacccag ccagcagggc accgatggcg aaccaccagg ccgacgatac ccggcgggcc
      601 aggccatgcg acacgatgat cagcgcgatc ccggccacgg cagaggcgat ggttccccct
      661 tccagcagca cggctccgac caggtcgccc tcggcgatgg cgttggcgcg gaccgacggc
      721 agcatcgtga ccagaagcag gtaggccccg aaaccgaatg cgaccaccgc gaccagaccg
      781 ggcgaaaatc cacgcagcgt ggcaagcgcg ggttgcattc ccggagcccg ccccaccagc
      841 cgcgagccaa gtccgcttgc cagccgggcc tcgttcagcc cgaccaggac gaatgccagt
      901 gcgaagggca ccaggtaata gatcagccgg aacagcagca gcgccgcagc ggcgtcaccg
      961 accggcaccg aggcgggcag cgttccgatc accaccgtct cgaagacgcc gatcccgccc
     1021 ggaacatggc tgagcacgcc gagcatggtc gcggcggcat agaccgcgac gaagctggca
     1081 tagtcgggct tgcccgccgg cagcaggatc cacagcgcaa aggatgccgc cgcgacgtcg
     1141 atgagggtga cgacaagctg tccggcaaga tcggcgggcg ggggcagtcg caaccggtgg
     1201 ccgcggatgg caaggctgcg ctgggtcgcg gacatccagc cgatcatcag cacggaaacc
     1261 gccgcgatgg tccctgcgac catctggatg gttcccggcg catagggcag ataggcgccg
     1321 atcgcgccgg gattgatggc cagcgcgacc accccgagca gcgtcaggcc ggtccccagg
     1381 gccagcgcga tatagcccga gacggccgcg acctcgaacg cgttcaggcc gacggccgaa
     1441 tagatgcggt atctcaccgc gccgccggac acgacgctga caccgatcgt gttgccgaag
     1501 gcatagccca gaaagccacc aagcgcgacg atcccgcgat caaggcgctt gccgatgaag
     1561 cgcagcccga accagtcata gaagatcagc gcga
//
LOCUS       DTVW01000206            1420 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1276974, whole
            genome shotgun sequence.
ACCESSION   DTVW01000206 DTVW01000000
VERSION     DTVW01000206.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1420)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1420)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1420
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1276974"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..848)
                     /locus_tag="EYO87_02770"
     CDS             complement(<1..848)
                     /locus_tag="EYO87_02770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007798673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-alpha,7-alpha,
                     12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase"
                     /protein_id="HIC64923.1"
                     /translation="MAIDYDHLMNFDIPEVRQSYGPAEVARFGLTIGMGQDPMDMKQL
                     AYVGAVADDQRAMPAMANILGHPGFWLGRPDTGVNAVKLVHGEQGMTIHRTLPAEGSV
                     IAKTRVTGLVDKGEGCGALLYSEKEIREAESGTLLATCRGTTFLRADGGFGGPGGPVK
                     PPHPLPDSDPDHVFDTPTRPEQALAYRWNADPNPLHLDPRVAAKAGFERPILHGLCTF
                     GCAAHALLAVMCDYDADRFGAMDGRFTAFVYPGETLRTEIWNDGSFRTRVLERDKVAI
                     GNGYFKL"
     gene            complement(838..>1420)
                     /locus_tag="EYO87_02775"
     CDS             complement(838..>1420)
                     /locus_tag="EYO87_02775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007798670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="CoA-binding protein"
                     /protein_id="HIC64924.1"
                     /translation="AEAFGYPVVMKILSPDILHKSDIGAVKLSIRSAEAVRAAHADIL
                     KAAQTRAPNAAVTGVLVAKQLSGGVECLMGINRDPTFGPVAVFGLGGIFVELLNDVAL
                     RACPFGPEIAREMILSIRSAAVLQGARGQAVADIDALAQMLSRLSVFAAGAGERLVSV
                     DLNPVLAMPEGQGAFALDAVIELDRQEAAALGH"
BASE COUNT          243 a          489 c          458 g          230 t
ORIGIN      
        1 agcttgaaat acccgttgcc gatcgcgacc ttgtcgcgct ccagcacgcg tgtgcggaac
       61 gatccgtcgt tccagatctc tgtccgcagc gtctcgcccg gataaacgaa ggcggtgaac
      121 cgcccgtcca tcgctccaaa ccggtcggcg tcatagtcgc acatcacggc aagcagggcg
      181 tgggcggcgc agccgaaggt gcagagtccg tgcaggatgg ggcgttcgaa cccggccttg
      241 gccgccaccc gcgggtccag atgcagtggg ttcggatcgg cgttccagcg gtaggcaagc
      301 gcttgctcgg gccgggttgg cgtgtcgaac acatgatcgg gatcgctgtc cggcagcgga
      361 tgcggcggtt tcaccgggcc acccggacca ccgaaaccgc cgtcggcgcg cagaaaggtc
      421 gtgccacgac aggtcgccag aagcgttccg ctctcggcct cgcggatctc tttttccgaa
      481 tagagcagcg cgccgcaccc ttcgcccttg tcgaccagcc cggtgacacg ggtcttggcg
      541 atcacgctgc cttcggcggg aagcgtccga tggatcgtca tgccctgctc gccgtgcacc
      601 agcttgaccg cgttgacccc ggtgtccggg cgccccagcc agaacccggg atggcccaga
      661 atgttggcca tcgcaggcat ggcgcgctga tcgtcggcga ccgcgcccac ataggcgagc
      721 tgcttcatgt ccatcggatc ctgccccatg ccgatggtca gcccgaagcg cgcgacctcg
      781 gcagggccat agctctggcg cacctcggga atgtcgaagt tcatcaggtg gtcatagtca
      841 atggccaagg gctgcggcct cctgcctgtc cagttcgatg acggcgtcga gggcaaaggc
      901 accctgccct tcgggcatcg ccagcaccgg gttgaggtcg accgacacca gccgctcgcc
      961 tgcgcccgcc gcaaagaccg acagtcgcga gagcatctgc gccaatgcgt cgatgtccgc
     1021 cacagcctgc ccgcgcgcgc cctgcaaaac cgcggcactg cggatcgaca ggatcatctc
     1081 gcgcgcgatc tctggcccga agggacaagc gcgcagcgcg acgtcattga gcagttcgac
     1141 gaaaatgccg ccgagcccga acacggcgac tggcccgaag gtgggatcgc ggttgatccc
     1201 cataaggcat tctaccccgc ccgagagttg cttggcgacg agcacgccgg tcaccgcagc
     1261 gttcggcgca cgggtctgcg cagccttcag aatgtcggca tgcgccgcgc gcaccgcctc
     1321 ggcgctgcgg atgctcagct tgaccgcgcc gatgtccgac ttgtgcagga tgtccggcga
     1381 caggatcttc atcaccaccg ggtagccaaa ggcctcggcg
//
LOCUS       DTVW01000207            2925 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1277469, whole
            genome shotgun sequence.
ACCESSION   DTVW01000207 DTVW01000000
VERSION     DTVW01000207.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2925)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2925)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2925
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1277469"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..312)
                     /gene="purH"
                     /locus_tag="EYO87_02780"
     CDS             complement(<1..312)
                     /gene="purH"
                     /locus_tag="EYO87_02780"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748993.1"
                     /note="involved in de novo purine biosynthesis; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HIC64925.1"
                     /translation="MSRPIALKRALISVSDKTGLIDFARKLEARGVEILSTGGSAKAM
                     REAGLGVVDVADVTGFPEMMDGRVKTLHPMVHGGLLAVRDNSEHAAAMEEHEIGAIDL
                     VV"
     gene            complement(564..1745)
                     /locus_tag="EYO87_02785"
     CDS             complement(564..1745)
                     /locus_tag="EYO87_02785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011746993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HIC64926.1"
                     /translation="MTRPDFDQIIDRVGTRCSKWDDMQMTYGVAPSDGLAMWVADMDF
                     RPPRAVQRAVQRAADHGIYGYPGRNAPYLEAIRWWHENRHGWQIETPWILTTAGLVNG
                     VAMAIDATTEPGDGVIVMSPVYHAFARVIRASRRELVEFPLALREDLYRMDWDNWDSL
                     LTGREKVLILCSPHNPGGRVWSYEELRQVADFCIRHDLILISDDIHCDLTMPGQTHSM
                     IAKVAPELRDRLITLTAATKTFNIAGAHIGNAIIADDTLREGVRRALLARGVSAAFMG
                     ADMVAAAYSPEGAAWVDALTEYLDGNRRLFDEGVNAIPGLRSMPLEATYLSWVDFSGT
                     GMTPEDFTARVEKIARIAANHGHTFGKGGDSFLRFNIATPRARVAEAVSRLQDAFADL
                     Q"
     gene            1827..2348
                     /locus_tag="EYO87_02790"
     CDS             1827..2348
                     /locus_tag="EYO87_02790"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HIC64927.1"
                     /translation="MSLRTILIHPDPRLKKVADPVARVTPEIESLAADLLATMYEAPG
                     VGLAAPQVGAGVRLFVMDASREPETEKRPMVLINPEITWTSEALNTYDEGCLSIPDQY
                     ADVTRPAQVRMRWLGLDGGTHEEDFDGLWATCAQHELDHLNGILFIDHLSAVKRQMIT
                     RKMVKLKRERARA"
     gene            2350..2859
                     /locus_tag="EYO87_02795"
     CDS             2350..2859
                     /locus_tag="EYO87_02795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HIC64928.1"
                     /translation="MVSRPGPLRPALPDPLAGGVVRPILCHPDPALREICQPSGYLGG
                     AELARLAADLLATMYAAEGRGLAAPQIGVLRRIVVMDAGWKDGAPEPLILCDPEILVR
                     SDQQDMAEERCLSIPGRAVAVPRSVAVTMRWYRLDGNLVSREFNGWAARIAQHEADHL
                     DGRLILDWA"
BASE COUNT          473 a          939 c         1022 g          491 t
ORIGIN      
        1 cacgacgaga tcgatcgcac cgatttcgtg ctcttccatg gctgcggcgt gctcggaatt
       61 gtcgcgtacc gccagcaatc cgccatggac catcgggtgc agcgtcttca cgcgcccgtc
      121 catcatctcg ggaaaacccg tcacatcggc cacatcgacg acgcccagcc cggcctcgcg
      181 catggccttg gcactgccgc cggtggacag gatctcgacc ccgcgcgcct ccagcttgcg
      241 ggcgaaatcg atcagtccgg tcttgtccga gaccgagatc agtgcgcgtt tcagggcgat
      301 gggacgggac atggcggacc ttgcatctgg atcgtgtcgc ccacctagcg ccaaggcgca
      361 ggaaggtcca gcgccacgga cggccttcgc cctcttggaa aataccttgc agggggtccg
      421 ggggacgcaa agtcccccgg cggtcgcggg acgctgggca ggctgcggat ccgggcgggg
      481 tcttgccgtt tcctggcgcg gccgaggcga acggactgcc tgcccgccgc aaggcgccgg
      541 aactggcggc ggcgcgccgt ttcctactgc aaatcggcaa aggcgtcttg caggcgcgat
      601 acggcctcgg ccacgcgggc gcggggggtg gcgatgttga aacgcagaaa gctgtcgccg
      661 cccttgccga aggtgtggcc atgattggcg gcgatgcggg cgatcttctc gacgcgggcg
      721 gtgaaatcct cgggcgtcat gccggtgccc gagaaatcga cccaggacag ataagtggct
      781 tccagcggca tggatcgcag gcccggaatc gcgttcacgc cctcgtcgaa caggcggcgg
      841 ttgccatcca gatattcggt cagcgcatcg acccacgccg cgccttcggg cgaataggcg
      901 gcggcgacca tgtccgcgcc catgaaggcg gccgatacgc cacgcgccag cagcgcgcgg
      961 cgaacccctt cgcgcagggt atcgtcggcg atgatggcat tgccgatatg ggcgccggcg
     1021 atgttgaagg tcttggtggc ggcggtcagg gtgatcagcc ggtcacgcag ttcgggcgcg
     1081 accttggcga tcatgctgtg ggtctggccc ggcatcgtca ggtcgcaatg gatatcgtcc
     1141 gagatcagga tcagatcgtg gcggatgcag aaatcggcga cctggcgcaa ttcctcgtac
     1201 gaccagacgc ggccgccggg attgtgcggc gagcagagga tcaggacttt ctcgcgcccg
     1261 gtcaacaggc tgtcccagtt gtcccaatcc atccgataga ggtcttcgcg cagggccagt
     1321 ggaaattcga ccagttcgcg acgcgaggcg cgaatgacgc gggcgaaggc gtgatagacg
     1381 ggcgacatca cgatcacgcc gtcgccgggt tcggtggtgg cgtcgatggc catggcgacg
     1441 ccattgacca gtcccgccgt ggtcaggatc cacggcgtct cgatctgcca gccatggcgg
     1501 ttttcatgcc accagcggat cgcctccaga tagggcgcat tgcggccggg atagccgtag
     1561 atgccgtggt cggcggcgcg ctggacggcc cgctgcaccg cccggggcgg gcggaaatcc
     1621 atgtcggcga cccacatcgc cagtccgtcc gacggcgcca cgccataggt catctgcatg
     1681 tcgtcccatt tcgagcaacg ggtgccaacg cggtcgatga tctgatcgaa atcgggtcgg
     1741 gtcatggcgg ctttcctgct ggggcgtttc cgccctgcat acgcgggttg ttgcttatgg
     1801 tgaagccatc gcctaaatcc accggcatga gcctgcgcac gatcctgatc catcccgatc
     1861 cccgcctgaa gaaggtggcc gatcccgtcg cccgcgtcac gcccgagatc gagtcgctgg
     1921 cggccgatct gctggccacg atgtatgagg cgccgggtgt cggcctggcc gcgccgcagg
     1981 tgggggcggg ggtgcggcta ttcgtgatgg atgcgagccg ggagccggag accgagaaac
     2041 gtcccatggt gctgatcaac cccgagatca cctggacctc ggaggcgctc aacacctatg
     2101 acgagggttg tctgtcgatt ccggatcaat atgccgatgt cacccggccg gcccaggtgc
     2161 ggatgcgctg gctgggactg gacggcggga cacatgagga agacttcgac gggctgtggg
     2221 cgacctgcgc ccagcacgaa ctggaccacc tgaacgggat cctgttcatc gaccaccttt
     2281 cggcggtcaa gcggcagatg atcacccgca agatggtcaa gctgaaacgc gagcgcgccc
     2341 gtgcctgaca tggtgtcccg gcccggcccg ctgcggcccg ccttgcccga tccgctggcg
     2401 gggggcgtgg tgcggccgat cctgtgccat cccgacccgg cgctgcgcga gatctgtcag
     2461 ccctcgggct atctgggcgg ggccgagctt gcccgactgg ccgccgatct tctggccacg
     2521 atgtatgcgg ccgaagggcg cgggttggcc gcgccccaga tcggggtgct gcggcggatc
     2581 gtggtcatgg atgccggctg gaaggacggc gcgccggaac ccctgatcct ctgcgatccc
     2641 gagatcctgg tccgttcgga ccagcaggac atggccgagg agcgctgcct gtcgatcccc
     2701 ggacgggcgg tcgccgtgcc gcgttcggtc gcggtcacga tgcgctggta tcggctggac
     2761 ggcaatctgg taagccgcga attcaatggc tgggccgcgc ggatcgcaca gcacgaggcg
     2821 gatcatctgg acgggcggct gatcctggac tgggcatgag cgtgcggccc gtcatcgcct
     2881 acgccgatcc gcccctgcat cgcgcggccg aaccgatcgg ggcgg
//
LOCUS       DTVW01000208            1440 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1277998, whole
            genome shotgun sequence.
ACCESSION   DTVW01000208 DTVW01000000
VERSION     DTVW01000208.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1440)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1440)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1440
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1277998"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..763)
                     /locus_tag="EYO87_02800"
     CDS             complement(<1..763)
                     /locus_tag="EYO87_02800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005794081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2793 domain-containing protein"
                     /protein_id="HIC64929.1"
                     /translation="MPDSTTNLLLPYLMAAQAQKHVTHNEALRLLDGLVQLSVKSQEL
                     TAPPPAPADGDRYIVASGATGGWAGWDLNVALWTDGAWLRLPPREGWRAWIEDEAVLL
                     VRIGAGWEPVIPTALDDLTRLGIGMAASAGAPFSAKLNSALWTALYAADGGSGDLTQT
                     LNRETGTNDAGLILQTGFSTRALIGLFGSDRLRIAVSPDGSSFRDALGVDPATGIVDQ
                     PNLPRFKAWTNYDNYVATDTWTTLGINVADYNDQGC"
     gene            complement(784..1314)
                     /locus_tag="EYO87_02805"
     CDS             complement(784..1314)
                     /locus_tag="EYO87_02805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64930.1"
                     /translation="MGMPTPAGARVVLLNEALIPLPIPEADLGIPFNWRIGPARHPVS
                     SDTFAALNFTPEGAGLRPFAPVHVAQPWRQPHSPGDLVIRWTRRSRSLAADSWQGIEV
                     PMGEEQESYEVRIMNGAAVKRTLTSTAPSVTYTAAQQADDFGTLLAPGGSLTIRICQL
                     SARIGRGTARTTTLYI"
     gene            1316..1440
                     /locus_tag="EYO87_02810"
                     /pseudo
     CDS             1316..1440
                     /locus_tag="EYO87_02810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009831631.1"
                     /note="catalyzes the condensation of acetyl-CoA with
                     malonyl-ACP to initiate cycles of fatty acid elongation;
                     differs from 3-oxoacyl-(acyl carrier protein) synthase I
                     and II in that it utilizes CoA thioesters as primers
                     rather than acyl-ACPs; incomplete; partial in the middle
                     of a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase III"
BASE COUNT          231 a          462 c          488 g          259 t
ORIGIN      
        1 aacagccctg gtcgttatag tctgccacgt tgatgccaag cgtcgtccag gtgtctgtgg
       61 cgacgtaatt gtcgtaattc gtccaggcct tgaagcgcgg caggttcggc tggtccacga
      121 tgcccgttgc cggatcgacg cccagcgcat cgcgaaaact gctaccatcg ggcgagacgg
      181 cgatgcgcag ccggtccgat ccgaagaggc cgatcagcgc ccgggtggaa aagccggtct
      241 gcaggatcag cccggcatcg ttagtcccag tttcccggtt cagggtctgg gtcagatcgc
      301 cgctgccgcc gtccgccgca tagagcgcgg tccagagagc gctgttcagc ttggccgaga
      361 agggggcgcc cgcgcttgcc gccatgccga tgccaagccg ggtcagatcg tcaagcgcgg
      421 tcgggatcac cggctcccag cccgcgccga tccggaccag caagaccgcc tcatcctcga
      481 tccatgcccg ccagccctcg cgtggtggca ggcgcagcca ggcgccatcg gtccagaggg
      541 cgacgttcag atcccagccc gcccaaccgc ccgtcgcgcc ggaagcgacg atatagcggt
      601 cgccgtcggc aggcgccggg ggtggcgcgg tcagctcctg acttttgacc gacagctgca
      661 ccagcccatc gagcagacgc agggcctcgt tatgggtgac gtgcttctgc gcctgcgccg
      721 ccatgagata tggcagcagc aggttcgtcg tgctgtcggg catgcggatg tctttcttca
      781 ggatcagata tagagggttg tggttcgtgc cgtgccacgc ccgatgcggg ccgagagctg
      841 gcagatgcgg atggtcaggc tgccgccggg ggccagcaac gtgccgaaat cgtcggcctg
      901 ctgggcggct gtgtaggtga ccgagggcgc agtgctggtc agggtccgct tcacggccgc
      961 gccgttcatg atcctgacct cgtagctttc ctgctcttcg cccatcggca cctcgatccc
     1021 ctgccaactg tcggcagcga ggctgcggga gcgccgtgtc catcggatca ccagatcgcc
     1081 agggctatgc ggctggcgcc atggctgcgc gacatggact ggcgcaaagg gtcgcagccc
     1141 agcgccctcg ggcgtaaagt tgagggctgc gaaggtgtcg ctgctgaccg ggtggcgggc
     1201 gggtccgatg cgccagttga aggggatgcc caaatccgcc tcaggaattg gcagcgggat
     1261 cagggcctcg ttcagcagaa ccacccgcgc cccggccggg gtgggcatcc ccatggcctg
     1321 ttcgtttgct ttgcatcgcg ctcacgatgc ggtcgctgtg ggctctgcgc gctgtgcgct
     1381 ggtgattaac ccggaattga taactcctca ggtcaatttc aaagaccggg acagccactt
//
LOCUS       DTVW01000209            1209 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1279486, whole
            genome shotgun sequence.
ACCESSION   DTVW01000209 DTVW01000000
VERSION     DTVW01000209.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1209)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1209)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1209
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1279486"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..597
                     /locus_tag="EYO87_02815"
     CDS             <1..597
                     /locus_tag="EYO87_02815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018000876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane metalloprotease"
                     /protein_id="HIC64931.1"
                     /translation="LYVGTPLAIALFLPKGWLFPALFLFTLAGLLLLWRTGGFRWSSL
                     IRGIRIPWWEVAGIAIATLAAGTAILWLVRPEALFVLARTRPEFLLLIWALYPLLSAL
                     PQELIFRALFFHRYGPVLPQGRAGIAVNAAVFAFAHLMYWSAVVLALTFIGGWIFARA
                     YRRHGFPAAWLLHAVAGNILFAVGMGYYFYSGNVVRPF"
     gene            657..>1209
                     /locus_tag="EYO87_02820"
     CDS             657..>1209
                     /locus_tag="EYO87_02820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_353894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HIC64932.1"
                     /translation="MHPYRSHTCADLNAAHAAEAVRLSGWVHRVRDHGGVLFVDLRDH
                     YGMTQVLADSDSPAFAAMEKLRAETVIRIDGRVKLRDPSLVNSKLPTGEIEVYATDLE
                     VLGPAEELPLPVFGDLDYPEETRLAYRFLDLRRDSLHNNIMLRSQVIRSLRNRMWDAG
                     FTEFQTPIITASSPEGARDFLVPS"
BASE COUNT          161 a          413 c          382 g          253 t
ORIGIN      
        1 ctctatgtcg ggacgccgct ggccatcgcg ctgtttctgc cgaaaggctg gctgtttccg
       61 gcgctgttcc tgttcacgct ggcgggcctg ttgctgttgt ggcggaccgg cggatttcgc
      121 tggtccagcc tgatccgcgg catccggatt ccctggtggg aggtggcggg catcgccatc
      181 gcgacgctgg ccgccggcac cgcgatcctg tggctggtcc gccccgaggc gctgttcgtc
      241 ctggcccgca cccggccgga attcctgttg ctgatctggg ctctctatcc gcttctttcc
      301 gcgctgccgc aggaactgat ctttcgcgcg cttttctttc accgctacgg accggtgctg
      361 ccccaggggc gcgccggcat tgccgtcaat gccgcggtct tcgccttcgc gcatctgatg
      421 tattggtcgg cggtcgtcct ggcgctgacc ttcatcggcg gctggatctt tgcgcgggcc
      481 tatcggcgtc acggctttcc agcggcgtgg ctgctgcatg cggtcgcggg caacatcctg
      541 ttcgcggtcg ggatgggtta ttatttctac agcggcaacg tggtgcggcc tttctgagcg
      601 gttgacttcc ccgctgtcgc acggttcatg cgggggctga acgaacgagg tccgcaatgc
      661 acccctatcg cagccatacc tgcgccgatc tgaacgccgc ccatgccgca gaggcggtcc
      721 gcctgtccgg ctgggttcac cgtgtccgcg atcacggcgg cgtcctgttt gtcgatctgc
      781 gcgaccatta cggcatgacc caggtcctgg ccgacagcga cagccccgcc ttcgccgcga
      841 tggaaaagct gcgcgccgag acggtgatcc gcatcgacgg ccgggtgaag ctgcgcgatc
      901 catcactggt caattccaag ctgcccaccg gcgagatcga agtctatgcc accgatctgg
      961 aggtgctggg cccggccgag gaactgccgc tgccggtctt tggcgatctg gactaccccg
     1021 aggaaacccg gctggcctat cggtttctcg acctgcgccg cgacagcctg cacaacaaca
     1081 tcatgctgcg ctcgcaggtg atccgcagct tgcgcaaccg catgtgggac gccggcttca
     1141 ccgaattcca gacgccgatc atcaccgcct ccagccccga aggcgcgcgc gacttcctag
     1201 tgccgtcgc
//
LOCUS       DTVW01000210            1273 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1279507, whole
            genome shotgun sequence.
ACCESSION   DTVW01000210 DTVW01000000
VERSION     DTVW01000210.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1273)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1273)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1273
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1279507"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1273)
                     /gene="glgB"
                     /locus_tag="EYO87_02825"
     CDS             complement(<1..>1273)
                     /gene="glgB"
                     /locus_tag="EYO87_02825"
                     /EC_number="2.4.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011569017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="1,4-alpha-glucan branching enzyme"
                     /protein_id="HIC64933.1"
                     /translation="FAAVVPAGPYRLKARSGGGVEWEFDDPYRFGPVLGDVDRYLIGE
                     GTHRQLWQALGAHVMAHEGAQGTHFAVWAPNARRVSVIGQFNHWDGRRHPMRRVGDSG
                     VWEIFLPGIAEGALYKYELVGADGGVLQKADPVGFGSQHPPEKASVVRDISGYGWGDA
                     AWMAGRAEAQDRTAPISVYEVHLGSWRRRWDDHGRPLSYKELARDLIAYVSDMGFTHL
                     ELLPISEFPFDGSWGYQPVGLYAPTIRFGPPHEFRDLVEAAHEAGIGVLLDWVPGHFP
                     TDGHGLARFDGTPLYEHADPREGFHQDWNTLIFNYGRTEVRNYLIANALYWLKEYHLD
                     GLRVDAVASMLYRDYSRKAGEWVPNRHGGRENLEAIAFIQAMNVVTYGEVPGIMNVAE
                     ESTSFPKVSAPVDAGGLGFGFKWNMGWMNDTL"
BASE COUNT          231 a          442 c          388 g          212 t
ORIGIN      
        1 cagcgtgtcg ttcatccagc ccatgttcca cttgaagccg aagcccagcc cccccgcatc
       61 gaccggggcc gagaccttgg ggaaagacgt gctttcctcg gccacgttca tgatgccggg
      121 cacctcgcca taggtgacga cgttcatggc ctggatgaag gcgatggcct ccaggttttc
      181 ccgcccgcca tgcctgttgg gcacccattc gccggccttg cgtgaataat cgcgatacag
      241 catcgaggcc accgcatcca cgcgcagccc gtcgagatga tattccttca gccaatacag
      301 ggcgttggcg atcaggtagt tccggacctc ggttcggccg taattgaaga tcagcgtgtt
      361 ccagtcctga tggaaccctt cgcgcgggtc ggcatgttcg taaagcggcg tgccgtcgaa
      421 gcgggccagc ccgtgcccgt cggtggggaa atggcccggc acccagtcca gcaacacgcc
      481 gatcccggcc tcgtgcgcgg cctcgaccag atcgcggaat tcatgcggcg gcccgaaccg
      541 gatcgtcggc gcataaagcc ccaccggctg atagccccat gagccgtcga aggggaattc
      601 gctgatcggc agcagttcca gatgggtgaa acccatatcg ctgacatagg caatcagatc
      661 gcgggcaagc tccttgtagg acaggggccg gccatgatcg tcccaccgcc gccgccagga
      721 tcccagatgc acctcgtaga cgctgatcgg ggcggtccgg tcctgggcct cggcgcggcc
      781 agccatccag gccgcgtcgc cccagccata tccggaaatg tcgcgcacga cgctggcctt
      841 ttcgggcgga tgctggctgc cgaagccgac cggatcggcc ttctgcagga cgccgccatc
      901 ggcgccgacc agttcgtatt tgtaaagcgc gccttcggcg atgcccggaa gaaagatttc
      961 ccagacgccg ctgtcgccca cccgccgcat cggatggcgg cgaccgtccc agtgattgaa
     1021 ctgcccgatg accgagacgc gccgggcatt gggcgcccag accgcgaaat gcgtgccctg
     1081 cgcgccctca tgcgccatca catgcgcgcc gagggcctgc cacaattgac gatgcgttcc
     1141 ctcgccgatc agatagcggt ccacatcgcc cagaaccggg ccgaagcgat acggatcgtc
     1201 gaattcccat tccacgccgc cgcccgatct ggccttcagc cggtatgggc cggcgggaac
     1261 caccgccgcg aac
//
LOCUS       DTVW01000211            2139 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1279709, whole
            genome shotgun sequence.
ACCESSION   DTVW01000211 DTVW01000000
VERSION     DTVW01000211.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2139)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2139)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2139
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1279709"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..613)
                     /locus_tag="EYO87_02830"
     CDS             complement(<1..613)
                     /locus_tag="EYO87_02830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007798700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HIC64934.1"
                     /translation="MTEQRHIAPRDQIAGLRAALKLPLIGAPMFLASGVDLVVAQCKA
                     GIIGTFPSLNARPAAQLDEWLTEIQARLDTHRQESGETPAPFGVNLIVNDYNTRLDED
                     LATLVRHRVPLVITSLSAPDKVVEAVHRYGGLVFHDVVKARHARRAVAAGVDGLILVC
                     SGAGGHAGTLSPFALIEEVRAFYDGPLALSGAIANGRAILAAEV"
     gene            complement(621..1550)
                     /locus_tag="EYO87_02835"
     CDS             complement(621..1550)
                     /locus_tag="EYO87_02835"
                     /inference="COORDINATES: protein motif:HMM:PF03328.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA ester lyase"
                     /protein_id="HIC64935.1"
                     /translation="MYMKSLSDQTPSFPLFVSAARPDVFATACSAGSDMVVIDFEDSV
                     APDSKAAVRRIPQCALPQERSVKLYLRVNGVGTVWYRDDVAFARMAGVDGVVLPKSEG
                     AEEITALRKALAPGQKVIAQIETVRGLSRVEEIAQVADRLALGSIDLSEDLGCAHTRL
                     ALLPLRSRIVQAARLAGAPAPLDGVTISVTDAAAISDDAMHASELGFGGKCLIHPQQL
                     PPARAGFRTQPQDLDWARHALEAEDSALPDAEGEVLGSPVVVRARRLLLRGQAQTGQG
                     AVEGSGIAVPASAPSAHRQSPGQNRSGQRPSEM"
     gene            complement(1624..>2139)
                     /locus_tag="EYO87_02840"
     CDS             complement(1624..>2139)
                     /locus_tag="EYO87_02840"
                     /EC_number="4.1.3.34"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007427937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citryl-CoA lyase"
                     /protein_id="HIC64936.1"
                     /translation="AGLNGLGTVFVGSMEGAARLLYEALPAEKLGTGADLDRIAQEVV
                     ADYAARKQILPGLGHQLHKPVDPRTPRLFEIAAENGLSGEYVALMQAIQREAEAARGK
                     PLPINATGAIGAICCQFGFPWQIVRGFGVMARSIGLVGHILEERSDPIAYELWQRTEE
                     EILHNNGPQAG"
BASE COUNT          343 a          738 c          705 g          353 t
ORIGIN      
        1 gcacctcggc ggcgaggatc gcgcggccat tcgcgatcgc gcccgacagc gccagcggcc
       61 cgtcatagaa ggcgcgcacc tcttcgatca gagcaaaagg gctcagcgtc ccggcgtgcc
      121 cgcccgcgcc ggagcagaca aggatcagcc cgtcgacccc cgccgcaacc gcgcggcgcg
      181 cgtggcgggc cttgaccacg tcatggaaca ccagaccgcc atagcggtgc accgcctcga
      241 ccactttgtc gggcgcggaa agcgaggtga tcaccagcgg aacgcggtgg cgcacaaggg
      301 tggcgaggtc ctcgtcgaga cgggtgttgt agtcattgac gatcaggttc acgccaaagg
      361 gcgctggcgt ctcgccgctc tcctgccggt gggtgtcgag ccgggcttgg atctcggtca
      421 gccattcgtc gagctgcgcg gcggggcgcg cgttgagcga aggaaaggtg ccgatgatgc
      481 ccgccttgca ctgggccaca accagatcga cgcccgaggc caaaaacatc ggagcgccga
      541 tcagcggcag tttaagggca gcccgcagcc cggcgatctg gtcccgcggc gcgatgtgac
      601 gttgctccgt catgcgatcc tcacatttct gatggtctct ggccggaccg gttttggcct
      661 ggtgattgcc ggtgggcaga gggggcgctg gccggaacag cgatccccga tccttcgacc
      721 gcgccctgcc ctgtctgcgc ctgaccgcgc agcaggagcc gacgggcccg cacgacgacc
      781 ggcgatccca gcacttcccc ctcggcatcg ggcagcgcgc tgtcttctgc ctcgagcgcg
      841 tggcgcgccc agtcgaggtc ttgcggctgg gtgcgaaagc ccgcccgtgc tggcggcagc
      901 tgttgcggat ggatcaggca tttgccgccg aagcccagct cgcttgcatg catggcgtca
      961 tcgctgatcg cggcggcgtc ggtcacgctt atggtcaccc catcgagcgg cgccggggcg
     1021 ccggccagtc gcgccgcctg cacgatgcgg ctgcgcagcg gcagcagcgc aagacgggtg
     1081 tgggcgcagc ccagatcttc ggacaggtcg atggagccca aggccagccg gtccgcgacc
     1141 tgggcgattt cctcgacccg cgacaggccg cgcactgtct cgatctgcgc aattaccttc
     1201 tgccccgggg ccaatgcttt gcgcagcgcg gtgatctctt ctgcgccttc gcttttgggc
     1261 aggacgaccc cgtcgacccc ggccatccgg gcgaaggcga cgtcatcgcg ataccatacc
     1321 gtgccgacgc cattgacccg caggtagagc ttcaccgagc gttcttgcgg cagcgcgcat
     1381 tgcgggatgc gccgaactgc cgctttgctg tcgggggcga cagagtcctc gaagtcgatc
     1441 acgaccatgt ccgaccctgc gctgcacgcg gtggcaaaga cgtctggccg cgccgcggac
     1501 acaaacagcg ggaagcttgg cgtctggtca gaaaggcttt tcatatacat gagatgctcc
     1561 gttggtcccg gcgtcgaacc ctgtcacgca gccgcgccgc gtttccgaac caagcccccg
     1621 gcatcaaccg gcctgcgggc cgttgttgtg cagaatttcc tcttcggtcc gctgccacag
     1681 ctcgtaggca atcgggtcgc tgcgttcttc gaggatgtgc ccgacgaggc cgatcgaccg
     1741 cgccatgacc ccgaaaccgc gcacgatctg ccatggaaag ccgaactggc agcagattgc
     1801 cccgattgcg cccgtcgcat tgatcggtag cggcttgccg cgggccgcct cggcctcgcg
     1861 ctgaatcgct tgcataagcg cgacatactc gcccgacagg ccattttccg cagcgatctc
     1921 gaacaggcgc ggcgtgcgcg gatcgaccgg cttgtgcagc tgatgaccga gccccggcaa
     1981 aatctgcttg cgcgcggcgt agtccgcgac aacctcttgg gcgatgcgat caaggtctgc
     2041 cccggtgccg agcttttctg cgggcagcgc ctcgtagagc aggcgcgccg cgccctccat
     2101 cgagccgacg aacaccgtgc caaggccgtt caaccccgc
//
LOCUS       DTVW01000212            1896 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1280785, whole
            genome shotgun sequence.
ACCESSION   DTVW01000212 DTVW01000000
VERSION     DTVW01000212.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1896)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1896)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1896
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1280785"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..413)
                     /locus_tag="EYO87_02845"
     CDS             complement(<1..413)
                     /locus_tag="EYO87_02845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013065908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64937.1"
                     /translation="MTEFSPEWQAEEQARRDRMAASGLYRAEDEHSSCGVGFVVDLDG
                     KPSRKVVQHGIDALKAIWHRGAVDADGKTGDGAGIHVQIPVPFFYDQVRRTGHEPDND
                     KLIAVGQVFLPRINFAQQETCRTIVESEVLRMGHY"
     gene            complement(410..835)
                     /locus_tag="EYO87_02850"
     CDS             complement(410..835)
                     /locus_tag="EYO87_02850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014428226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GFA family protein"
                     /protein_id="HIC64938.1"
                     /translation="MSGRQRGHCLCGAVTIEAVLSDEISGCHCDNCTRWSGGIQFGIE
                     ATDLTVTGPVKTHRSSRLAERAWCDICGSALWFRYVEGHDAGYHEVMPGLFPNAGGAR
                     LTRIVYADRAPDGYALAGDHARITRAEYESENPHLEAPQ"
     gene            complement(832..1629)
                     /locus_tag="EYO87_02855"
     CDS             complement(832..1629)
                     /locus_tag="EYO87_02855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64939.1"
                     /translation="MQRTSTEWTGKSTAAVARVGARRDDGRGALTWLAALILLAGFLA
                     AIPLPGRAAIYTPPQGCRLDYTVQNRGCSVVQYYRCDADPKGDQRSATFGQEGLTHLS
                     HIDDQTRWLESTDPQTGLQDVLEKGAADDASFDTLLNTGYDDFDFWTVSNTGERLRHV
                     GFDELTGETVTIDGVTLEKTRFQLTTFSESGEVLIERKGQQFISRKMRRFYGGIEQQR
                     DWTGQQLNTDDSPVLFSFPGEKGFGDTTPQFDCDQLMTGLLSSKDDA"
     gene            complement(1644..>1896)
                     /locus_tag="EYO87_02860"
     CDS             complement(1644..>1896)
                     /locus_tag="EYO87_02860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010393251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HIC64940.1"
                     /translation="VIKALGFEPEELPRLWGVDGLEVTRWGTIKADFQTHLTSVPGVY
                     AVGDIVRGASLVVWAIRDGREAAESIANFLTGEQRVAAE"
BASE COUNT          324 a          640 c          586 g          346 t
ORIGIN      
        1 atataatggc ccatgcgcag aacctcggat tccacgatgg tgcggcaggt ttcctgctgg
       61 gcgaaattga tccgcggcag gaacacctga ccgaccgcga tcagcttgtc gttgtcgggc
      121 tcgtgcccgg tgcggcgaac ctggtcatag aagaagggca ccggaatctg gacatggatg
      181 ccggcgccat cgcctgtctt gccatccgca tcgaccgcgc cgcgatgcca gatcgccttc
      241 agcgcatcga tgccgtgctg cacgaccttg cggctgggct tgccgtccag atcgacgacg
      301 aaacccaccc cgcaggacga atgttcgtcc tcggcgcgat agaggccgct tgcggccatc
      361 cggtcgcggc gggcctgttc ctcggcttgc cactcgggcg aaaactcggt cattgcggag
      421 cctccagatg aggattttcg gattcgtatt cggcgcgcgt gatccgcgca tgatcgcccg
      481 ccagcgcata tccgtcgggc gcgcgatcgg catagacaat gcgcgtcagc cgcgcgccgc
      541 cggcattggg gaacaatccg ggcatgactt cgtgatagcc ggcatcgtgc ccctcgacat
      601 agcggaacca cagcgccgag ccgcagatat cgcaccaggc ccgctctgcc aaccgagacg
      661 agcgatgcgt cttgaccggt cccgtcacgg tcagatccgt cgcctcgatc ccgaactgga
      721 tgccgcccga ccagcgggtg caattgtcgc aatggcagcc gctgatctca tcggacagga
      781 cggcctcgat cgtgaccgcg ccacacaggc aatggccccg ttgccgcccg ctcatgcgtc
      841 gtccttggaa gacagcaggc cagtcatcag ctgatcgcag tcgaattgcg gcgtggtgtc
      901 gccaaagccc ttttcgcccg gaaagctgaa cagcacgggg ctgtcatcgg tgttcagttg
      961 ctgcccggtc cagtcgcgct gctgctcgat gccgccatag aaacggcgca tcttgcggct
     1021 gatgaactgc tggcccttgc gttcgatcag aacctcgccg ctctcgctga aggtggtcag
     1081 ctggaagcgg gtcttttcca gcgtgacccc gtcgatggtg acggtttcgc cagtcagttc
     1141 gtcaaaaccg acgtgccgca gcctttcgcc cgtgttcgag acggtccaga aatcgaaatc
     1201 gtcataaccg gtgttcagca acgtgtcgaa gctggcatcg tcggcggcgc ccttttccag
     1261 cacgtcctgc agaccggtct ggggatcggt gctttcaagc cagcgggtct ggtcgtcgat
     1321 atgggacagg tgggtcagcc cctcctgtcc aaaggtggcg ctgcgctgat cgcccttggg
     1381 atcggcgtcg cagcggtaat attgcacgac cgaacagccc cggttctgga ccgtgtaatc
     1441 cagccggcag ccttgcggcg gggtatagat cgcggcccgc cccggcagtg gaatcgcggc
     1501 cagaaacccg gccagcagaa tcagcgccgc cagccaggtc agcgcgcccc gcccgtcgtc
     1561 acgccgcgcg ccgacccgcg cgacagccgc cgtggatttc ccggtccatt ccgtgcttgt
     1621 ccgttgcatc cctgatacct cgctcattcg gcggcgacgc gctgctcgcc ggtcaggaaa
     1681 ttggcgatcg attcggccgc ctcgcgcccg tcacggatcg cccagaccac aaggcttgcc
     1741 ccgcgcacga tgtcgcccac cgcatagacg ccggggaccg aggtcaggtg ggtctggaaa
     1801 tcggccttga tcgtgcccca gcgtgtcacc tccagaccgt ccacgcccca cagccggggc
     1861 agttcctcgg gttcgaagcc aagcgccttg atgacc
//
LOCUS       DTVW01000213            2539 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1281674, whole
            genome shotgun sequence.
ACCESSION   DTVW01000213 DTVW01000000
VERSION     DTVW01000213.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2539)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2539)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2539
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1281674"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..387
                     /locus_tag="EYO87_02865"
     CDS             <1..387
                     /locus_tag="EYO87_02865"
                     /inference="COORDINATES: protein motif:HMM:PF03448.15"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64941.1"
                     /translation="LAEELRDRALRIERYMETIDRKKAEVAEAESALRKRLAELKSQK
                     GGMRSRQDQSTAAVRSDIEKLVALYDQMKPAEAAAVLTNLPADFAAEILLRVRPETGA
                     RIIAAVEPRQAALLTAQMGARSVRKN"
     gene            399..1265
                     /gene="motA"
                     /locus_tag="EYO87_02870"
     CDS             399..1265
                     /gene="motA"
                     /locus_tag="EYO87_02870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor stator protein MotA"
                     /protein_id="HIC64942.1"
                     /translation="MFGFLGIFLTMAMVFGGYTLAGGKMGVITEALPFEMMMIMGAAI
                     GSYLLSNDSHVLKGTAGGLVRAFKGPRWTEADHQDVLCLMFQLLKIARENPVALEAHI
                     ESPDESPIFNAYPRLKANHDIVSLIADTLRSASLNYDDPYQVEEMLSRRIAILREEEM
                     HVPHALQTVADALPALGIVAAVLGVIKTMSAIDQPPEVLGKMIGGALVGTFLGVFLAY
                     GFVAPLANRLGGVIKQDLGFFDVVKSVLVAGLHQHATNLCVEVGRQAVPEHVRPSFDT
                     LETALRDLKKAA"
     gene            1265..1543
                     /locus_tag="EYO87_02875"
     CDS             1265..1543
                     /locus_tag="EYO87_02875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64943.1"
                     /translation="MFSLVLIALSASTAAADLPLLPEAKAFAEEASAWLLEGEDLPYD
                     YRVRLMRMAPQSRLQALVFLRRAGLLTGDEWSLQDVLRPAPAMPGEGE"
     gene            1594..>2539
                     /locus_tag="EYO87_02880"
     CDS             1594..>2539
                     /locus_tag="EYO87_02880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlhA"
                     /protein_id="HIC64944.1"
                     /translation="MMVTSGLVLIVISLVIPLPPGLLDLGIALSIATATLVLVMASLV
                     DKPTDFQAFPVLLLVSLVIRLSLNVSSTRLILTQGHTGPDAAGQVINGFAAFVAGGSL
                     LVGLTVFSVISVVNFMVITKGSGRMAEVAARFALDSLPGKQLAIDGDLNAGAIDHQEA
                     KRRRIQEQREISFFGSLDGASKFVKGDAIAGIVITLINLLIGLTVGIVVHGMPVGQAM
                     STYSHLTIGDGLVSQIPALITSMAAALLLSRGGATDTTAELLSRQLTRGWQPAAVVAA
                     AMLLMSFVPGMPRLLFLALTGAMSFAAWQIARRQRAAEE"
BASE COUNT          428 a          769 c          831 g          511 t
ORIGIN      
        1 ctggccgaag aactgcgcga ccgcgcgttg cggatcgaac gctacatgga aacgatcgac
       61 cgcaagaagg ccgaagtcgc cgaggccgag tcggcgctgc gcaagcgcct ggccgagcta
      121 aaatcacaga agggcgggat gcgaagccgt caggaccagt ccaccgcggc ggtgcgaagc
      181 gacatagaga agctcgtggc cctgtatgat cagatgaaac ccgccgaggc cgcggccgtc
      241 ctgaccaatc tgccggccga tttcgcggcc gaaatcctgc ttcgtgtccg ccccgaaacc
      301 ggtgcccgca tcatcgctgc cgtcgagccg cggcaggcgg cgctgctgac ggcacaaatg
      361 ggcgcgcgca gcgtccggaa aaactaggag atttcgcaat gttcggcttt ctgggcattt
      421 tcctgacgat ggccatggtt tttggaggct atacccttgc cggcggcaag atgggcgtca
      481 tcaccgaagc cttgccattc gaaatgatga tgatcatggg ggcggcgatc ggatcctatc
      541 tgctgtccaa tgacagccac gtgctgaagg gaaccgccgg gggccttgtg cgtgcgttca
      601 agggtccgcg ctggaccgaa gccgatcatc aggatgtgct gtgcctgatg tttcaattgc
      661 tgaagatcgc ccgcgagaac ccggtggctc tggaggccca tatcgaatcg cccgacgagt
      721 cgccgatctt caatgcctat ccgcgtctca aggccaatca cgacatcgtt tcgctgatcg
      781 ccgatacgct gcgttcggcc agcctgaact acgatgaccc ctaccaggtc gaggaaatgc
      841 tctcgcgccg tatcgccatc ctgcgcgagg aggaaatgca cgtcccccat gcgctgcaga
      901 cggttgccga tgcactgcct gccctgggaa tcgtggccgc ggttctgggc gtgatcaaga
      961 cgatgagcgc catcgaccag ccacccgagg tgctgggaaa gatgatcggc ggcgcgctgg
     1021 tcggaacctt cctgggcgtg tttcttgcct atggtttcgt ggcgccgctg gccaaccgcc
     1081 ttggtggggt gatcaagcag gatctgggct ttttcgatgt cgtcaagtcg gttctggtcg
     1141 ccggtctgca ccagcacgcc accaaccttt gcgtcgaggt ggggcgacag gcggtgcccg
     1201 agcatgtgcg acccagtttc gatacgcttg agacggcact gcgcgatctg aagaaggcag
     1261 cgtgatgttc tcgttggtac tcatcgcact gagcgcatcg acggcagcgg cggatctgcc
     1321 tttgctgccc gaggccaagg ctttcgccga agaggcgtcg gcctggctgc tcgagggcga
     1381 ggatctgccc tacgactatc gcgtccggct gatgcggatg gcgccccaat cgcgacttca
     1441 ggcgctggtt ttcctgcgcc gcgcggggct tttgaccggt gatgaatggt cgcttcagga
     1501 tgtcttgcgc ccggcgccgg cgatgccagg agaaggcgaa tgaaatcggt tggcgcgatc
     1561 gcatcgcgaa agggcaaatc catcgatgcc tcgatgatgg tgacgagcgg ccttgtgctg
     1621 atcgtcatct cgctggtcat tccgttgccg ccggggctgc tggatctggg gatcgcgctg
     1681 tcgatcgcga ccgcgacgct ggtcctggtc atggcgtcgc tggtcgacaa gccgacggat
     1741 tttcaggcct ttccggtcct gctgctggtc agcctggtca tccgcctgtc gctgaacgtg
     1801 tcgtcgaccc ggctgatcct gacgcagggc cataccggac ccgatgcggc cggtcaggtc
     1861 atcaacggct ttgcggcctt cgtggccggc ggttcgcttc tggtgggtct gacggtgttc
     1921 tcggtgatct cggtggtgaa tttcatggtc atcaccaagg gttcggggcg catggccgag
     1981 gttgcggcgc ggtttgcact tgattcgctg cccggcaagc aattggccat cgacggggat
     2041 ctcaatgccg gcgcgatcga tcatcaggaa gcaaagcgcc gacgtatcca ggaacagcgc
     2101 gagatcagct ttttcggctc gcttgacggt gcgtccaaat tcgtcaaggg cgatgcgatc
     2161 gcgggtatcg tgattacgct gatcaacctt ctgatcggcc tgaccgtcgg gatcgtcgtc
     2221 cacggcatgc ccgtcggcca agcgatgtcc acctattcgc atctgacgat cggcgacggt
     2281 ctggtcagcc agattcccgc ccttatcacc tcgatggctg cggccctgct gctgtcgcga
     2341 ggcggggcga cggataccac ggccgaactt ctgtcgcggc aacttacgcg cggctggcaa
     2401 cccgcggcgg tcgtggcggc ggcgatgctg ctgatgtcct tcgtccccgg catgccacga
     2461 ctgctgtttc ttgccctgac gggcgcgatg tcgttcgcgg cctggcagat cgcgcgccgc
     2521 cagcgcgccg ccgaagaag
//
LOCUS       DTVW01000214            2473 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1281747, whole
            genome shotgun sequence.
ACCESSION   DTVW01000214 DTVW01000000
VERSION     DTVW01000214.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2473)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2473)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2473
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1281747"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..456)
                     /locus_tag="EYO87_02885"
     CDS             complement(<1..456)
                     /locus_tag="EYO87_02885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006611171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HIC64945.1"
                     /translation="MKHFNLKGTRALLLSVTLAGSALLAGGVDAQTLRAVMHSDLRVL
                     DPILTTAYMSRNHGYMIFDTLFALDANLEPQPQMVKDYEVSEDELTYTFTLRDGLKFH
                     DGADVTGADVAASIKRWGERDGMGQVLMSFVDSMEQGAEPNQFVLTLKEP"
     gene            complement(523..2037)
                     /locus_tag="EYO87_02890"
     CDS             complement(523..2037)
                     /locus_tag="EYO87_02890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006469504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M81 family peptidase"
                     /protein_id="HIC64946.1"
                     /translation="MGMSRRVALAGFLHETNTFAPTKARMSDFVQGGGYMPMARGQAV
                     IDQSRGINLGIGGAVEFGESAGWDMVPVLWAGAIPSAHVSRDAYESITEEIISGIHAA
                     GPLDGIFLDLHGAMVAEHEDDGEGRLLARLRAAVGDVPIAAALDLHGNITARMVEAAD
                     MLVGFRTYPHVDMARTGHRAAAQLDRLMAGTRPAKAFRRLPFLVPIAWQSTRGQPGRD
                     IYDLVAKTECSDVTSTSFFFGFPAADFPGCGPTVICYGETQAPADAAADRIERAVRDA
                     EPALAGQTFDPDEGVIEAMRIAADARRPVIIADTQDNPGAGGDSNTTGMLRALVRQGA
                     KRAALGLLVDPGAAAAAHAAGEGTEIDLALGGFSGIQGDAPYEARFAVEKLSEGKLIA
                     SGPFYGGAPLDLGPSACLRVDDVRVVVTSHKAQMADREMYRFVGIEPETQAILVNKSS
                     VHFRADFDHIAETILTCTAPGPMPLSPASLPFRRLAPGMRLEPLGEAFRPQDSP"
     gene            2239..>2473
                     /locus_tag="EYO87_02895"
     CDS             2239..>2473
                     /locus_tag="EYO87_02895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005848788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HIC64947.1"
                     /translation="MQSVEKAMTVLSAFHHADGPLTLTQVAERAGIDRSAAQRMIHTL
                     RVLGYIRRDSDGNGFLPGIRLLDHTLDYLRLDSL"
BASE COUNT          436 a          838 c          768 g          431 t
ORIGIN      
        1 aggctctttc agcgtgagga cgaactggtt tggctctgcg ccctgttcca tgctgtccac
       61 gaaggacatc agcacctggc ccattccgtc gcgctcgccc caacgcttga tcgaggctgc
      121 gacgtccgcg cccgtcacat ccgcgccatc atgaaatttc agcccgtcgc gcagggtgaa
      181 ggtataggtc agctcgtcct cggagacctc gtaatccttc accatctgag gctgcggttc
      241 cagattggcg tcaagcgcga aaagcgtgtc gaagatcatg taaccgtggt tgcggctcat
      301 gtaggccgtg gtcaggatcg ggtccagcac ccgcaggtcc gaatgcatga ccgcccgcag
      361 cgtctgcgcg tccacgccgc ccgccaacag ggccgatccc gccagcgtga cactgagcag
      421 cagcgcccgc gtccctttca gattgaagtg cttcatccgt aacctcccgt ggttgatgaa
      481 aatgcgcccg gctttattgc cttgtgtgac gcggttgtcg gttcatggtg aatcctgcgg
      541 cctgaacgcc tcgcccagcg gttccagccg cattccgggc gccagtcgcc ggaagggcag
      601 gcttgccggg ctcagcggca tcggtccggg ggcggtgcag gtcaggatcg tctcggcgat
      661 atggtcgaaa tcggcgcgaa aatggaccga gctcttgttc accaggatcg cctgtgtctc
      721 gggttcgatc ccgacgaagc ggtacatctc gcgatccgcc atctgggcct tgtggctggt
      781 gacgaccacg cgaacatcgt caacgcgcag gcaggcagag gggccgagat ccagcggtgc
      841 gccgccatag aaggggccgg atgcgatcag cttgccctcc gacagctttt ccacggcgaa
      901 acgcgcttca tagggcgcat cgccctggat cccggaaaag ccgccaagcg cgaggtcgat
      961 ttctgtccct tcgccagccg catgggcggc ggcggccgcc cctggatcta ccagaagacc
     1021 aagggcggcg cgctttgccc cctgccggac aagcgcgcgc agcattcccg tcgtgttgct
     1081 gtcgcccccg gcgccgggat tgtcctgcgt gtcggcaatg atcacggggc ggcgcgcgtc
     1141 cgccgcgatc cgcatggcct cgatcacacc ttcgtcgggg tcgaatgtct gcccggccag
     1201 cgccggctcg gcgtcgcgca ccgcccgttc gatccggtcg gccgcagcat cggccggggc
     1261 ctgtgtttcg ccatagcaga tcaccgtcgg gccgcagccc gggaaatccg cggcgggaaa
     1321 accgaagaag aaggaggtgc tggtgacgtc gctgcattcg gtctttgcga ccagatcgta
     1381 gatatccctt ccgggctggc cgcgcgtgct ttgccaggcg ataggcacca ggaaaggcag
     1441 gcggcggaat gccttcgcag gtctcgtgcc ggccatcagg cgatccagtt gcgccgccgc
     1501 ccgatgcccg gtccgggcca tgtccacatg cggataggtg cgaaagccca ccagcatatc
     1561 cgccgcctcg accatccgag cggtgatgtt gccatgcaga tccagcgcgg cggcgatggg
     1621 cacgtcaccc accgccgcac gcagccgggc cagcagccgt ccctcgccat cgtcctcgtg
     1681 ctcggccacc atcgcgccgt gcaggtcaag aaagatgccg tccagcggcc cggcggcatg
     1741 gatgcccgaa atgatctctt cggtgatgct ttcataggcg tcgcgcgaaa catgcgccga
     1801 cgggatcgct ccggcccaca gcacgggcac catgtcccag cccgccgatt cgccgaattc
     1861 gaccgcgcca ccaatcccca gattgatacc gcgcgactgg tcgatcaccg cctgcccgcg
     1921 cgccatcggc atgtatccac cgccctgcac gaaatccgac atccgcgcct tcgtcggtgc
     1981 gaacgtgttg gtttcatgaa gaaaaccggc cagcgccacg cgcctcgaca tgcccaatcc
     2041 cttcgattcc ccgcgatcgg tccgcaagga cctaagtatt gccaagcaat acaactgcat
     2101 cgtatagaaa ttgtagaagc tggccttacg tcaagtcaac agcgccgtca cgaaggatag
     2161 cacatgccca gaaatacgac gcgggcagaa cccggacggc gcgacctgac cgacgcggcg
     2221 cgggccagcg cgctgttcgt gcagtcggtg gaaaaggcga tgacggtgct gtcggccttt
     2281 caccacgcgg atggcccgct gacgctgacc caggtcgccg agcgcgccgg gatcgaccgc
     2341 tcggcggcgc agcgcatgat ccataccctt cgcgtgctgg gctacattcg ccgcgattcc
     2401 gacggaaacg gattcctgcc gggaatacgc ctgctggatc atacgctgga ctatctgcgg
     2461 ctcgactcgc tgg
//
LOCUS       DTVW01000215            1850 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1284522, whole
            genome shotgun sequence.
ACCESSION   DTVW01000215 DTVW01000000
VERSION     DTVW01000215.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1850)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1850)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1850
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1284522"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..718
                     /locus_tag="EYO87_02900"
     CDS             <1..718
                     /locus_tag="EYO87_02900"
                     /inference="COORDINATES: protein motif:HMM:PF00583.23"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HIC64948.1"
                     /translation="RNAGWTAFLGLSNAGVCFPQMRDADSQDWDALPAVLKNLSITGL
                     NGEAAQIARILAALRLDRHPTRLDRIEPCFALALNDLRMPDAAGLSIRAPRKAELPLL
                     IDWRAAYRIEIMGDDPAQARDNAVAELPLWLARDSLRLATRDGQPVALTGFNARLPEI
                     VQVGGVYVPPTLRGQRLARRALALHLAEARAAGAGRAFLFAASEAAARTYTAIGFVPA
                     GRMRIVIFEQPAEVAPRCGR"
     gene            715..1167
                     /locus_tag="EYO87_02905"
                     /pseudo
     CDS             715..1167
                     /locus_tag="EYO87_02905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998316.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            1290..>1850
                     /locus_tag="EYO87_02910"
     CDS             1290..>1850
                     /locus_tag="EYO87_02910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--cysteine ligase"
                     /protein_id="HIC64949.1"
                     /translation="MSIPQQGGGPIESRDQLAAYIASGEKPREAWRIGTEHEKFGYCK
                     DHKLPLPYEGDCSVKAMLTGLQERFGWSPVLEQGKIIGLERDGANVSLEPGGQLELSG
                     APVENIHQTCDEVNGHLAEVKSVADDMGAGFIGLGAAPIWSQEQMPMMPKGRYRLMTD
                     YMGRVGTLGTQMMYRTCTVQVNLDFAS"
BASE COUNT          260 a          624 c          652 g          314 t
ORIGIN      
        1 gcgcaatgcc ggctggaccg ccttcctcgg cctttcgaat gccggcgtct gctttccgca
       61 gatgcgcgat gccgattcgc aggactggga cgcgctgccc gcggtgctga aaaatctttc
      121 catcaccggt ctcaacggcg aggccgcgca gattgcccgc atccttgcgg cgctgcgcct
      181 cgaccgtcat ccgacgcgcc tcgaccggat cgaaccgtgt ttcgccctgg cgctgaacga
      241 tctgcggatg cccgacgcgg ccggactttc gattcgcgcg ccgcgcaagg cggaactgcc
      301 gcttctgatc gactggcgcg cggcctaccg gatcgaaatc atgggtgacg accctgcgca
      361 ggcgcgcgac aatgccgtgg ccgaactgcc gctgtggctg gccagggatt cgctgcggct
      421 ggccacccgc gacggccagc cggtcgcgct gaccggtttc aacgcgcggc tgcccgagat
      481 cgtgcaggtc ggcggcgttt atgttccccc gacgctgcgc ggtcagcgtc ttgcccgccg
      541 cgcgctggcc ctgcacctgg ccgaggcgcg cgcagcaggc gccggccgcg ccttcctgtt
      601 cgcggcgtcg gaggctgccg cccgcaccta taccgcgatc ggctttgtac cggcggggcg
      661 gatgcggatc gtgatcttcg aacagcccgc cgaggtcgcg ccccgatgcg gccgctgatc
      721 cgccccgaga ttgccgcgtg gctgtcgcgc tggtccgagg ttctggtcgc cggcgccatc
      781 gcgctggcgg gcctgtggct gacgctgcgc ggcggctggt tcttcgccgc gctcgggctt
      841 gcgatgctgc tggtcggcgc gtcgctggcc atcggcgccc ggcgcaggct gccctttcgc
      901 cgcccgatcg aggcgcctgg cgtggtcgaa ctgatcgagg gcgcgatccg ctattacggg
      961 gcgaccgatc cgggcggcga gatcgcgctg cgcgatctgg tcgagatccg ccttttgcgg
     1021 ctgaacgggc aggcgcattg gcggctgcgc agcgccggag gcgaggcgct gctgattccc
     1081 gtcgatgccg ccggggccga ggtcctggcc cacggcttta ccgcgcttcc gggccttgac
     1141 atgggcgccg tctcgcaggc gctggcgcat gtcagcgaac agcccgacgc gacgcggctg
     1201 gtctggcgca ggcccgatca cggcgggttg acttgacggt ccgctgttgc cacctgtgac
     1261 cgaccggcaa tccgcgaaag gtccgtccga tgtcgatacc ccagcagggc ggtggcccga
     1321 tcgaaagccg cgatcagctt gccgcctata tcgcctcggg cgagaagccg cgcgaggcct
     1381 ggcggatcgg caccgagcac gagaaattcg gctattgcaa ggatcacaag ctgccgctgc
     1441 cctatgaggg cgattgttcg gtcaaggcga tgctgaccgg cctgcaggaa cgcttcggct
     1501 ggtcgccggt cctagagcag ggcaagatca tcgggctgga acgcgacggc gccaatgtca
     1561 gcctggaacc gggcggacag ctggaattgt ccggcgctcc ggtcgagaac atccaccaga
     1621 cctgcgacga ggtgaacggc catctggccg aggtgaaatc cgttgccgat gatatgggcg
     1681 cgggcttcat cggtcttggc gccgcgccga tctggtcgca ggagcagatg ccgatgatgc
     1741 ccaaggggcg ctaccggctg atgaccgact acatgggccg ggtcggcacg ctgggcacgc
     1801 agatgatgta tcgcacctgc accgtgcagg tgaacctgga tttcgccagc
//
LOCUS       DTVW01000216            1109 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1285237, whole
            genome shotgun sequence.
ACCESSION   DTVW01000216 DTVW01000000
VERSION     DTVW01000216.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1109)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1109)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1109
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1285237"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..246)
                     /locus_tag="EYO87_02915"
     CDS             complement(<1..246)
                     /locus_tag="EYO87_02915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_351925.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl phosphate synthase small subunit"
                     /protein_id="HIC64950.1"
                     /translation="MAAEPTACLVLADGTIFYGQGFGATGEVLAELVFNTAMTGYQEI
                     LTDPSYAAQIITFTFPHVGNVGSNEEDVETLKPAARGL"
     gene            428..892
                     /locus_tag="EYO87_02920"
     CDS             428..892
                     /locus_tag="EYO87_02920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GatB/YqeY domain-containing protein"
                     /protein_id="HIC64951.1"
                     /translation="MDLRARLQAATKEAMKAKEAHRLSTLRLIAAAVKDREIAARGQD
                     GEGGDLREADLIAILSRMVKQRQESAKAYEEGGRLELAGKEQQEIEIIREFLPRQMDE
                     AETSAAIGAAISDLGASSIRDMGRVMTELRARHAGQMDFGAAGPKVKERLLH"
     gene            944..>1109
                     /locus_tag="EYO87_02925"
     CDS             944..>1109
                     /locus_tag="EYO87_02925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_880802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3008 family protein"
                     /protein_id="HIC64952.1"
                     /translation="MPAKSKAQQRAAGAALSAKRGETKVGDLQGASRDMYDSMSEDEL
                     EDFASTDLDGL"
BASE COUNT          224 a          342 c          385 g          158 t
ORIGIN      
        1 cagcccgcgc gccgccggct tcagggtctc cacatcctct tcattggagc ccacattgcc
       61 cacatgggga aaggtgaagg tgatgatctg tgccgcgtag gacggatcgg tcaggatttc
      121 ctgatagccg gtcatcgcgg tattgaagac cagttcggcc agcacctcgc cggttgcgcc
      181 gaagccctga ccgtagaaga tcgtcccgtc ggcaagcacg aggcaggcgg tcggttctgc
      241 agccatggcg ggcaccctct gtcttgaatc agccggtcaa taggcgcggc cggagcggag
      301 gtcaagtcga agggcaggga acgggcgctt gattcgccgc gccgcagcgc ctacatggcg
      361 gggtccattc tgccgcccgg cgcgtcagtc acgcgcgccg cccggcgcat ccgtcaagga
      421 gaaggccatg gatctgcgag ccagactgca agccgccacg aaagaggcga tgaaagccaa
      481 ggaggcgcat cgcctgtcca ccctgaggct gatcgcggcc gccgtgaagg atcgcgagat
      541 cgcagcgcgc gggcaggatg gcgagggcgg cgatctgcgc gaggcggacc tgatcgcgat
      601 cctctcgcgg atggtcaagc aacgtcagga atcggccaag gcctatgaag agggcgggcg
      661 gcttgaactg gccggaaagg agcagcagga aatcgagatc atccgcgaat tcctgccgcg
      721 ccagatggac gaggccgaga ccagcgccgc gatcggcgcg gcgatttcgg acctgggcgc
      781 atccagcatc cgcgacatgg gacgcgtgat gaccgaattg cgcgcgcgac atgcaggaca
      841 gatggatttc ggcgcggcag ggccgaaggt gaaggaacgg ctgctgcact gacgccgcga
      901 aaccgcatgc gcccgaccgc gttatccgtc aggaggtgta gccatgcccg caaaatccaa
      961 ggcccagcaa cgcgccgccg gggcggccct gtccgccaag cgcggcgaaa ccaaggtcgg
     1021 cgacctgcag ggcgcgtccc gcgacatgta tgacagcatg agcgaagacg agcttgaaga
     1081 tttcgcctcg accgacttgg acggattgc
//
LOCUS       DTVW01000217            1684 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1286599, whole
            genome shotgun sequence.
ACCESSION   DTVW01000217 DTVW01000000
VERSION     DTVW01000217.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1684)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1684)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1684
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1286599"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..546
                     /locus_tag="EYO87_02930"
     CDS             <1..546
                     /locus_tag="EYO87_02930"
                     /EC_number="1.1.1.157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_351737.1"
                     /note="converts (S)-3-hydroxybutanoyl-CoA to
                     3-acetoacetyl-CoA; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxybutyryl-CoA dehydrogenase"
                     /protein_id="HIC64953.1"
                     /translation="ETILTSNTSSISITRLASRTDRPEKFMGFHFMNPVPVMQLVELI
                     RGIATDQATFDLLHEVVRTLGKTAASAEDFPAFIVNRILMPMINEAVYTLYEGVGSVK
                     SIDESMKLGANHPMGPLELADFIGLDTCLAIMNVLHDGLADTKYRPCPLLTKYVEAGW
                     LGRKTGRGFYDYRGETPVPTR"
     gene            628..1569
                     /gene="choX"
                     /locus_tag="EYO87_02935"
     CDS             628..1569
                     /gene="choX"
                     /locus_tag="EYO87_02935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="choline ABC transporter substrate-binding
                     protein"
                     /protein_id="HIC64954.1"
                     /translation="MTIPKTTTLALLLAAVATPILADDPATCKTVRYSDPGWTDITAT
                     NGVAAVLLEALGYTPKIATLSVPVGYEALKNGDTDLFLGNWMPAQQKFRDDLDQTGQI
                     EELARNLEGAKFTLAVNKPGAAAGVKDFADLDARKDEFDGKIYGIEPGAPANQSIQAM
                     IDADAFGLGDWTLVESGEQAMLAQVGRNENAGKPTVFLAWAPHPMNEAIDITYLSGGD
                     EQFGPDFGGATVHTLARSEWVEACPNAAKLFSQLVFDVPMENVLMGKILNDGMDGRQA
                     AKEWIAANPDVAATWLDGVTTLDGQPGDKAVMAAVSK"
BASE COUNT          351 a          526 c          521 g          286 t
ORIGIN      
        1 gagacgatcc tgacctcgaa cacgtcctcg atctcgatca cgcgactggc cagccgcacc
       61 gaccggcccg agaaattcat gggcttccac ttcatgaatc cggttccggt catgcaattg
      121 gtcgaactga tccgcggcat cgccaccgac caggccactt tcgatctgct gcacgaggtc
      181 gtcaggacgc tgggcaagac cgccgccagc gccgaggatt ttcccgcctt catcgtcaac
      241 cgcatcctga tgccgatgat caacgaggcg gtctatacgc tgtacgaggg ggtgggatcg
      301 gtcaaatcca tcgacgaatc gatgaaactg ggcgcgaacc atccgatggg accgctggaa
      361 ctggccgatt tcatcgggct ggatacctgc cttgcgatca tgaatgtgct gcatgacggg
      421 ctggccgaca cgaaataccg tccctgccct ctgctgacga aatatgtcga ggccggctgg
      481 ctgggccgca agaccggccg cggcttttac gactatcgcg gcgaaacgcc cgttccgaca
      541 cgctgagcgt cgtttcctga cgcgcaagaa gtctcggctg acgctggact gcgcagacaa
      601 tcagaaacct gacaggaagg caaacccatg acgattccga agacaaccac cctcgcgctg
      661 ctgctggcgg ccgtggccac gcctattctg gccgacgacc ccgcgacctg caagacggtg
      721 cgctattccg atcccggctg gaccgacatt accgccacca acggcgtcgc ggcggtgctg
      781 ctggaggcat tgggctatac gcccaagatc gccacgctgt cggtgccggt tggctatgag
      841 gcgctgaaga acggcgacac cgacctgttc ctgggcaact ggatgcccgc gcagcagaaa
      901 ttccgcgacg atctggacca gaccggccag atcgaggaac tggcccggaa cctcgaaggc
      961 gccaagttca ccctggcggt gaacaagccc ggcgccgccg ccggcgtaaa ggattttgcc
     1021 gatctcgatg cccgcaagga cgaattcgac ggcaagatct atggcatcga gcccggtgcg
     1081 ccggcgaacc agtcgatcca ggcgatgatt gacgccgacg cattcgggct gggcgactgg
     1141 acgctggtcg aatcgggcga acaggccatg ctggctcagg tcggccgcaa cgagaatgcg
     1201 ggcaagccca cggtcttcct ggcctgggcg ccccatccga tgaacgaggc catcgacatc
     1261 acctacctgt cgggcggaga cgaacaattc ggaccggatt tcgggggcgc cacggtgcac
     1321 acgctggccc gctccgaatg ggtcgaagcc tgccccaacg ccgcaaaact gttcagccag
     1381 cttgtcttcg acgtgccgat ggaaaatgtc ctgatgggca agatcctgaa cgacgggatg
     1441 gatggccggc aggccgcgaa ggaatggatc gccgccaatc ccgacgtcgc ggcgacatgg
     1501 ctggacggcg tgaccacgct ggatggtcag cccggcgaca aggcggtcat ggctgcggtg
     1561 agcaagtgaa gcccaatatc ctgatcctga tggcggaccc gggacggatt tttcagcggt
     1621 aaatgatggc tacgtctcca taacaccgtt gcgtattgat ggtacggacc atagtcagcg
     1681 tgaa
//
LOCUS       DTVW01000218            1666 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1286788, whole
            genome shotgun sequence.
ACCESSION   DTVW01000218 DTVW01000000
VERSION     DTVW01000218.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1666)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1666)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1666
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1286788"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            414..833
                     /locus_tag="EYO87_02940"
     CDS             414..833
                     /locus_tag="EYO87_02940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_004140940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EVE domain-containing protein"
                     /protein_id="HIC64955.1"
                     /translation="MTGPRHWIGVVSRDHVRKGVAGGFAMLNHGKLGPLTALTPGDGL
                     ICYSPKASYPDGPPLKAFTAIGTVRDSQPYKAEMAPGRTGFRRDIDWWKATETLLAPL
                     GDRLEFTRSNWGLVARRGLFEINAADFQTIRDAMTTE"
     gene            839..1093
                     /locus_tag="EYO87_02945"
     CDS             839..1093
                     /locus_tag="EYO87_02945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011746898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64956.1"
                     /translation="MQMIAHYTVKSYAAFRTAFDADAEDRGNNSLNLLQLWRESDSSA
                     WALFDVGNARTAREYLDGAAAVFNSQGGVTATSFHFVETA"
     gene            1093..1482
                     /locus_tag="EYO87_02950"
     CDS             1093..1482
                     /locus_tag="EYO87_02950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007793481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MAPEG family protein"
                     /protein_id="HIC64957.1"
                     /translation="MTAELTVLALAGLLQGLQFAAFSVAANRQIGPRVAMGTRDVKPE
                     LTGTAGRLQRALNNHFEGLVLFTLAVVVVTVPGQSSGLTATSAWIYLLARILYVPAYV
                     FGWVPWRSVIWAVGFATSMIMILASLF"
     gene            1546..>1666
                     /locus_tag="EYO87_02955"
     CDS             1546..>1666
                     /locus_tag="EYO87_02955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011746896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HIC64958.1"
                     /translation="MYDLIVIGAGPGGYVCAIRAAQLGLKVACVEGRETLGGTC"
BASE COUNT          269 a          563 c          541 g          293 t
ORIGIN      
        1 atggatctgt gatttgcgtc ccgggatgcc aggccacggc ccggaagcgg cggacaggtc
       61 cggcggaacc ttcccgtttc gggcctgacc cggcgcgggc gcttcgtgtc ccgttcgcgg
      121 cggatcgacg ccccttgcag atacggaaca ggggtccgat cggcaagggt gacggctgat
      181 cggcctgtgc attcatgcac tgatgcacct gagatccgtt ggaaacgcgc gcgggcgcac
      241 ggaacgatcg gggatcgtgc gttgtcggtg cacgccctgt gcacgcgctg tgcctgtccg
      301 gtggccgtcc ggtgcccccc gaaagccagc atttgctggg ccggacgcgg cagggcccaa
      361 ttccgccccg ccgcgcaacg cgcgcagccg ttgcgcaaca cccggggcgc cgcgtgaccg
      421 gcccccgcca ctggatcggc gtcgtcagcc gcgatcatgt ccgcaagggc gtcgccggcg
      481 gcttcgccat gctgaaccac ggcaagctgg gtccgctgac cgcgttgacg ccgggcgacg
      541 ggctgatctg ttactcgccg aaagcctcct atcccgacgg gccgccgctc aaggccttca
      601 ccgccatcgg cacggtccgg gacagccagc cctacaaggc cgaaatggct ccgggccgga
      661 ccggctttcg ccgcgatatc gactggtgga aggcaaccga aacccttctt gcgccgttgg
      721 gcgacaggct ggaatttacc cgcagcaact ggggcctcgt ggcccggcgc gggcttttcg
      781 aaatcaacgc cgcggatttc cagaccatcc gcgacgccat gacgacggag tgatcccgat
      841 gcagatgatc gcccattaca cggtcaagtc ctatgccgcc ttcaggaccg cctttgatgc
      901 cgatgccgag gatcgtggca acaacagcct gaacttgctg caactttggc gtgaaagcga
      961 cagcagcgcc tgggcattgt tcgatgtcgg caacgccagg acggcgcgcg agtatctgga
     1021 cggcgcggcg gcggtcttca acagtcaggg cggcgtgacc gcgaccagct tccactttgt
     1081 cgagaccgcc tgatgacagc cgaattgacc gttctcgccc ttgcaggtct tttgcagggc
     1141 cttcagttcg cggccttttc ggtggcggcg aatcggcaga tcggaccgcg ggtcgcgatg
     1201 ggcacgcgcg acgtcaaacc cgaactgacc ggaacggcgg gccgccttca gcgcgccctg
     1261 aacaatcatt tcgaggggct cgtcctgttc acccttgccg tggtggtggt caccgtgccg
     1321 ggccagtcca gcggcctcac cgccaccagc gcctggatct acctgctggc gcgcatcctc
     1381 tatgtgccgg cctacgtctt cggctgggtg ccctggcgct cggtcatctg ggcggtcggc
     1441 ttcgcgacca gcatgatcat gatcctggcg agccttttct gatcgcctgc cgggccatat
     1501 atctcgcgac ggcatcgccg caaacactga aaaagggaat accacatgta cgacctcatc
     1561 gtcatcggcg ccggacccgg cggctatgtc tgcgccatcc gtgccgcgca actgggcctg
     1621 aaggtcgcct gcgtcgaggg ccgcgaaacg ctgggtggca catgcc
//
LOCUS       DTVW01000219            1104 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1287052, whole
            genome shotgun sequence.
ACCESSION   DTVW01000219 DTVW01000000
VERSION     DTVW01000219.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1104)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1104)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1104
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1287052"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..423)
                     /locus_tag="EYO87_02960"
     CDS             complement(<1..423)
                     /locus_tag="EYO87_02960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013960456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyketide cyclase"
                     /protein_id="HIC64959.1"
                     /translation="MKGSRPEQAVLSRDTDLSKTDETRAVIEAMVDGLNDHRIDDIGQ
                     FFAESFRWMGNRGCGTKLGLQQFQDNWQRPFQAAFSDKVCVDEARLYMGEWAAAFGRQ
                     EATHSGPFMGIAPTGKRVQIRYMDFWKVVEGRITDNWVM"
     gene            complement(536..>1104)
                     /locus_tag="EYO87_02965"
     CDS             complement(536..>1104)
                     /locus_tag="EYO87_02965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013960455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HIC64960.1"
                     /translation="AFWLLIVALVFRALPHSVLVAGYLPVFINSAEILRPILGDAAPT
                     LYGQPYAVIAVLVAINQPFTIWMLRSFFQNIPTELDEAARVDGCSHFQAFRRVIMPVM
                     WPGVITTGLFSFLLAYNDFLVASLLLDAQNQTMVPAIASYFNRETTTTDQVEAIAAAV
                     SITAPLFLLVMVFQRQIVSGLTAGAVKG"
BASE COUNT          210 a          356 c          352 g          186 t
ORIGIN      
        1 catcacccag ttgtcggtga tgcggccctc cacgaccttc cagaaatcca tgtagcggat
       61 ctgcacccgc ttgccggtcg gggcgatgcc catgaaggga ccggaatggg tcgcctcctg
      121 ccggccgaag gcagcggccc attcgcccat gtaaagccgc gcctcgtcga cgcagacctt
      181 gtcggaaaag gcggcctgga acgggcgctg ccaattgtcc tggaactgct gcaagcccag
      241 cttggtgccg cagccccggt tgcccatcca gcgaaagctt tcggcgaaga actggccgat
      301 atcgtcgatg cggtggtcgt tcagcccgtc caccatcgct tcgatcacgg cgcgggtctc
      361 gtcggtcttg ctcagatcgg tgtcgcggct gagcaccgcc tgttcgggtc tggacccttt
      421 catctgtcgt cgtccttgtc agaaatgtcg cggaatcggt gcggggggat caccacccgc
      481 cgcagatcgt cgcggggcat cctgttccgg gccgggtggc gcgggcggca tgtcatcatc
      541 ccttcaccgc cccggcggtc agccccgata cgatctggcg ctggaacacc atcaccagca
      601 ggaacagcgg cgcggtgatc gatacggccg ccgcgatggc ctcgacctga tcggtcgtgg
      661 tcgtctcgcg gttgaaatag ctggcgatgg ccgggaccat ggtctggttc tgcgcgtcca
      721 gcagcagcga tgcgaccaga aagtcgttat aggcaagcag gaagctgaac agcccggtcg
      781 tgatgacgcc aggccacatc accggcatga tgacgcggcg gaatgcctgg aaatgcgaac
      841 agccatcgac gcgcgcggcc tcgtccagct cggtcgggat gttctggaag aaggaccgca
      901 gcatccagat cgtgaatggc tggttgatcg ccaccaggac cgcgatcacc gcatagggct
      961 ggccatacag cgtcggcgcc gcatcgccca ggatcggacg caggatctcg gcggaattga
     1021 tgaacaccgg cagatagccc gcaaccagca ccgaatgcgg cagtgcccga aagaccagcg
     1081 ccacgatcag caaccagaac gcca
//
LOCUS       DTVW01000220            1935 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1287418, whole
            genome shotgun sequence.
ACCESSION   DTVW01000220 DTVW01000000
VERSION     DTVW01000220.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1935)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1935)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1935
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1287418"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..185)
                     /locus_tag="EYO87_02970"
     CDS             complement(<1..185)
                     /locus_tag="EYO87_02970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017997753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64961.1"
                     /translation="MSADTKAPDAPDYRDTVFLPQTDFPMRAGLPAREPEWLARWARI
                     GIYDALRKASDGRAPFIL"
     gene            395..1204
                     /locus_tag="EYO87_02975"
     CDS             395..1204
                     /locus_tag="EYO87_02975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018001353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64962.1"
                     /translation="MIQSAERLAAVRRFVRARYGLRGTLALHRQALGWDLLRAPVNVA
                     LSPVFLILRLAAALLSRLGARRAGAWLAARRIFLTSNVARRITADLQAFVADLDARGI
                     GPDAPPDLTRARIEAHAEIRNAVAEITTSLIVLGAGLLLFHRATPGIMSLAGPVARMR
                     AEAEALRNFTLGSRLGGVWYSVFPVELSPWQVVATGLALAITASLVTTFAGLIADPIQ
                     LVTGTHRRRLMRMLDRLDRADAAGGLEREHLMARIGDLSDAALSLWRTLRG"
     gene            complement(1201..>1935)
                     /gene="ubiG"
                     /locus_tag="EYO87_02980"
     CDS             complement(1201..>1935)
                     /gene="ubiG"
                     /locus_tag="EYO87_02980"
                     /EC_number="2.1.1.222"
                     /EC_number="2.1.1.64"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 2-polyprenyl-6-hydroxyphenol
                     methylase/3-demethylubiquinol 3-O-methyltransferase UbiG"
                     /protein_id="HIC64963.1"
                     /translation="VPNCIVNGKSIGGGSELDAMQKQGKLRPLHMMNPVRLDYLTAQI
                     AAEFGRDLRGARPFGDLRVLDIGCGGGLVAEPMARLGASVTGADAASGNIEVARLHAE
                     GQGLDISYHVTTAEALAQDGEVFDAVLALEIVEHVADPAAFLATCQALVRPGGLVILS
                     TLNRTARSFGAAIIGAEWVMRWLPRGTHDWQRFITPDELGAMAAACGLEVADRKGMVF
                     NPIGFGWSLSDRDLSVNYLLTARRPA"
BASE COUNT          281 a          674 c          663 g          317 t
ORIGIN      
        1 aggatgaacg gcgcgcggcc atcggacgcc tttcgcaagg cgtcgtagat gccgatccgc
       61 gcccagcggg ccagccattc gggttcgcgg gcgggcaggc ccgcccgcat cgggaaatcg
      121 gtctgcggca ggaagacggt atcgcggtag tcgggcgcgt cgggggcttt ggtatcggcg
      181 ctcatcggcg ggcgttcctt tgtcgggcat tcaggattcg gatcagggca atcccgacgg
      241 cgcgatatct tacgccgccg ggccgctaat tcgaaaggag aaggccgcaa aatccatgcc
      301 tgcctctata ggaaggcggc aggcgggctg caagcggctg ccggtgcgcg cgattgtcat
      361 ggtcgcgtcg gccggcgccg gctagaatcg gcccatgatc cagtccgccg aacgcctcgc
      421 cgctgtcagg cgctttgtcc gcgcccgata cgggctgcgg ggcacgcttg cgctgcatcg
      481 ccaggcgctt ggctgggatc tgctgcgcgc gcccgtcaat gtggcgctgt cgccggtctt
      541 cctgatcctg cggctggctg ccgcgctgct cagccgtctc ggtgcaaggc gggcgggcgc
      601 ctggctggcg gcgcggcgca ttttcctgac ctcgaacgtc gcgcgacgga tcacggccga
      661 tctccaggct ttcgtggccg atctggatgc gcggggaatc gggccggacg cgccgcccga
      721 cctgacccgc gcccggatcg aggcccatgc cgagatccgc aacgccgtgg ccgagatcac
      781 cacatcgctg atcgtgctgg gcgcggggct gctgctgttt caccgcgcaa cgcccggtat
      841 catgtcgctg gcaggcccgg ttgcgcggat gcgggccgag gccgaggcct tgcgcaattt
      901 caccctgggg tcgcgactgg gcggggtctg gtattcggtc ttcccggtcg agctgtcgcc
      961 ctggcaggtc gtcgcgaccg ggctggccct tgcgatcacg gcctcgctgg tgacgacctt
     1021 cgccgggctg atcgcggatc cgatccagct tgtcaccggc acccatcgcc gccgcctgat
     1081 gcggatgctg gaccgcctgg accgcgccga tgccgccggc gggctggagc gggaacatct
     1141 gatggcccgg atcggcgatc tgtccgatgc ggcgctgtcg ctctggcgaa ccctgcgcgg
     1201 ctaggccgga cgccgggccg tcagcaggta attcaccgac agatcgcgat ccgacagcga
     1261 ccagccgaat ccgatcgggt tgaagaccat gcccttgcgg tccgcgacct cgaggccgca
     1321 ggccgcggcc atcgcgccca gttcgtcggg ggtgatgaag cgttgccagt catgcgtgcc
     1381 gcgcggcagc cagcgcatca cccattccgc gccgatgatc gcggcaccga aactgcgcgc
     1441 ggtgcggttc agcgtggaca ggatgaccag cccgcccggc ctgaccaacg cctgacaggt
     1501 cgccaggaaa gccgccggat cggcgacatg ctcgacgatt tccagcgcca gcaccgcgtc
     1561 gaagacctcg ccgtcctggg ccagggcctc ggccgtggtg acgtgatagc tgatgtccag
     1621 cccctgcccc tcggcgtgaa gccgcgccac ctcgatgttt ccgctggccg catccgcacc
     1681 cgtgaccgag gcacccagcc gtgccatggg ttcggccacc agcccaccgc cgcagccgat
     1741 atcgagcacc cgcagatcgc cgaacggacg cgccccgcgc agatcgcgac cgaactcggc
     1801 cgcgatctgc gcggtgagat agtccagccg caccggattc atcatgtgca gcggcctgag
     1861 cttgccctgc ttctgcatcg cgtccaactc tgagccgcca ccaatcgact tgccgttgac
     1921 gatgcagtta ggcac
//
LOCUS       DTVW01000221            1151 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1288012, whole
            genome shotgun sequence.
ACCESSION   DTVW01000221 DTVW01000000
VERSION     DTVW01000221.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1151)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1151)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1151
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1288012"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1085)
                     /locus_tag="EYO87_02985"
     CDS             complement(<1..1085)
                     /locus_tag="EYO87_02985"
                     /inference="COORDINATES: protein motif:HMM:PF01943.15"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flippase"
                     /protein_id="HIC64964.1"
                     /translation="MTAPVQPEGGGGGFRILDNLLALFAAQSVAVVAGLVSTAFLARA
                     LGPEAYGILGFGTAVVSYFGILAVLGTDYYGMREIARDRDRARPLVAQILGLRLVLVA
                     IASILFLMVLSRIDQPDRVKTVMVVQGAGLFVTALTLDFIFQGIQRMRVIAFRQAAAA
                     VLVLIAVLLLIRSPNDLFIAAGIPVAMIALTIIWLAALTHRRIVPLGIDFDPAAWRPI
                     LRASLPIVVAGVMAAIFLNIDIVMLGFLAEQHAVGLYVGVSKIFVIALMMGSLIGGAF
                     SPALAAAWPKSEEMRIRYRDFMAAVMFVGAPVAALGVAFPTDIIAIIFGSEFIGGEAA
                     LILLMTTVIFGHGCIASASALINWNDQT"
BASE COUNT          252 a          377 c          375 g          147 t
ORIGIN      
        1 gtctggtcgt tccagttgat cagggctgaa gccgacgcga tgcagccatg gccgaaaatc
       61 accgtcgtca tcaacaggat aagcgccgcc tccccgccga tgaattcgga cccgaagatg
      121 atggcgatga tgtcggtcgg aaatgcgact cccaatgcgg cgaccggggc gccgacgaac
      181 atcaccgcgg ccatgaaatc gcggtaacgg attcgcatct cctcgctctt cggccaggcg
      241 gcggcaagcg ccgggctgaa ggcgccgccg atgaggctac ccatcatcag ggcgatcaca
      301 aatatcttgg agacgccgac atagagcccg accgcgtgct gctcggcgag aaaacccagc
      361 atgacgatgt cgatattcag gaatatcgcg gccatgaccc cggcaaccac gatcggtagc
      421 gacgcgcgca ggatcggccg ccaggcggcg gggtcgaagt cgatgccgag agggacgatg
      481 cggcggtggg tcagcgccgc gagccagatg atggtcaagg cgatcatcgc aaccggaatc
      541 cccgcggcga taaacaggtc gttcggcgac cggatcagga gcaggacggc aatcagcacg
      601 agcaccgccg ccgccgcctg gcggaacgcg ataacccgca tgcgctgaat tccctgaaaa
      661 atgaaatcga gggtaagggc ggtgacgaac agcccggccc cctgcaccac catgaccgtc
      721 ttcacccgat ccggctgatc gatgcgtgaa agcaccatga ggaacaggat cgaggcgatg
      781 gccaccagca ccagccgcaa ccccaggatc tgcgccacca gcggcctggc gcgatcgcgg
      841 tcgcgggcga tctcgcgcat gccgtagtaa tcggtcccca acaccgccag aattccgaaa
      901 taggaaacca cggcggtgcc gaaaccgagg atgccgtaag cttcggggcc gagggcgcgg
      961 gcgaggaacg cggtcgaaac cagccccgcc acgaccgcca ccgactgcgc ggcgaacagc
     1021 gccagcaaat tatccaggat ccggaatccg ccgcccccgc cttccggttg caccggggcg
     1081 gtcatggcgc ccgccgccgg gcgggggccg atcggcgggg gaacatcatc tccggggccg
     1141 gatacggcgc a
//
LOCUS       DTVW01000222            4158 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1289698, whole
            genome shotgun sequence.
ACCESSION   DTVW01000222 DTVW01000000
VERSION     DTVW01000222.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 4158)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4158)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4158
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1289698"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..921)
                     /locus_tag="EYO87_02990"
     CDS             complement(<1..921)
                     /locus_tag="EYO87_02990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013165026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HIC64965.1"
                     /translation="MKQVEVAVIGAGWCGGIRAETLANSALVDKLHICEIRPDRLEEV
                     RTLTHPATATTDYKAIIANPDISVVYISTTPEQTHYPIARDCLKAGKHVLLEKPISME
                     FWEADELIQLSRDNNLKFTIGYSQRFNTKVAYAKKKIADGTLGKVVNVMVSRHLSRSL
                     GKKIASRVRLSPAAMESTHDLDFVFWMLEPAKPVRVYSQGAYGYMKELNGSYDTMWTT
                     VTMDNGMLVVIGGGWNLPPSYPNFCATWIEITGTEGALFLDDTHRDKWLNTVSDGTRY
                     PMSTMPGEQVDHVFAGQMGPETLHFLESVLL"
     gene            complement(1038..1520)
                     /locus_tag="EYO87_02995"
     CDS             complement(1038..1520)
                     /locus_tag="EYO87_02995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012968484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HIC64966.1"
                     /translation="MLEGPRKAIVSPFVPLMRSPQLMDRVQRVGEYLRYDSVIGRRLT
                     ELAILCTARFWDQPVEWAIHAPIARQEGIDPAIIAALAAARTPDFRREDERVVHATVD
                     ELLRTRRLSDASHAQALRLFGEQGVIDLFGVIGYYTLLSVVMNGAQTAAPDTTAPPLV
                     "
     gene            complement(1598..2164)
                     /locus_tag="EYO87_03000"
     CDS             complement(1598..2164)
                     /locus_tag="EYO87_03000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007836035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavin reductase"
                     /protein_id="HIC64967.1"
                     /translation="MTRHVLSFDKAAPPDSRLFRQALGRFSTGVTVITTRAPGGSRIG
                     VTANSFSAVSLDPPLILWSVRNEAPSLRAFLDAGVFAVNILTQEQADLSHHFATPRAD
                     KFAGIACADGHGGCPVLKGALALFECDLDRSIPAGDHVILLGRVVRASFDDAASPLLF
                     SSGRYAVAARLPNIDASSDLAAMWEGLG"
     gene            2417..3451
                     /locus_tag="EYO87_03005"
     CDS             2417..3451
                     /locus_tag="EYO87_03005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019427109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ldh family oxidoreductase"
                     /protein_id="HIC64968.1"
                     /translation="MQTLAAGVLGAEGLPPQEAAIVAEMMIEADLLGADGHGIFRLPR
                     YLERLRAGGFNARPNIRIARERGAMALVDGDNGFGHLVMKFCADEAVRRARSHGIGWV
                     GAHHSNHAGAAGVYALIPLAHDMIGFYVAVGSANHMAPWGGLEMLLSTNPIAVAIPAA
                     GRRPVLLDMATTVAAYGKVKLAAQRGETMPPDWMIDAQGNPLTDPARAGEGTLMPIGG
                     PKGYGLALIFGLLAGTLNGAAFGRDVIDYNHDDSSVANTGHFVVAIDIASFGDLEHFK
                     AEVARIGDEIAGSVRRPGFDAIRLPGERALSVREKRLAHGIPVPPALLEKLGAIAAAC
                     GLPSLQDQPE"
     gene            3448..3867
                     /locus_tag="EYO87_03010"
     CDS             3448..3867
                     /locus_tag="EYO87_03010"
                     /inference="COORDINATES: protein motif:HMM:PF07883.9"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HIC64969.1"
                     /translation="MTRRTAMIRHLEAIDEFDRGNGVVTRLFCNADICGAQVTTGTTV
                     LPVGKSVAMHYHNCDEQIVILAGRAEAEFQGHRRPIGPMEVAYIPRGEVHCFHNVGDQ
                     PVLMLFIYDAGEVTRTFEATGETVVHLGAGDRAQPKG"
BASE COUNT          723 a         1271 c         1383 g          781 t
ORIGIN      
        1 cagcagcacg ctttccagga aatgcagcgt ctcgggaccc atctggccgg caaagacatg
       61 gtccacctgt tcgcccggca tcgtcgacat gggatagcgg gtgccgtcgg acacggtgtt
      121 cagccatttg tcgcggtggg tatcgtcaag gaacaacgcg ccttcggttc ccgtgatctc
      181 gatccaggtc gcgcagaaat tgggatagct gggtggcagg ttccagccgc cgccgatcac
      241 gaccagcatc ccgttatcca tggtgacggt cgtccacatc gtgtcgtagg aaccgttgag
      301 ttccttcatg tagccgtaag ccccctgcga atagacccgc acgggtttcg ccggttccag
      361 catccagaac acgaaatcca gatcatgcgt ggattccatg gctgcgggcg acaaccgcac
      421 gcgcgaagcg atcttcttgc ccagcgaccg cgaaaggtgt cggctgacca tcacgttgac
      481 caccttgcca agcgtgccat cggcgatctt cttcttcgcg taggcaacct tggtgttgaa
      541 tcgctgcgaa tagccgatcg tgaatttcag attgttgtcc cgcgacagct ggatcagttc
      601 gtccgcctcc cagaattcca tcgaaatggg cttttccagc agcacatgct tgccggcctt
      661 caggcagtcg cgcgcgatgg gataatgggt ctgttcgggg gtggtcgaga tatagaccac
      721 cgagatgtcc ggattggcga tgattgcctt gtagtccgtg gttgccgtgg ccggatgggt
      781 cagggtgcgc acttcttcca ggcgatcggg gcggatctcg cagatatgca gcttgtccac
      841 cagggccgag ttggcaagcg tttccgcgcg aatgccgccg caccaaccgg cgccgatgac
      901 ggcgacctca acctgtttca tgtcgttcct cccgtttgcg cttttccggt gcaagcccgg
      961 ctgtgtggtt ctagcaatcg ctgacagcga aggtcatgat ttgtctggag agcgatgatc
     1021 agcttttctg atgcggctta gaccagcggg ggcgcggtcg tgtcgggcgc cgcggtctgc
     1081 gcgccgttca tgaccaccga tagcagcgtg taatagccga tgaccccgaa cagatcgatc
     1141 acgccctgct cgccgaacag ccgcagggcc tgtgcatgac ttgcgtccga cagccgtctg
     1201 gtgcgcagaa gttcatcgac tgttgcgtgg acgacgcgct cgtcctcgcg ccggaaatcg
     1261 ggcgtccggg ccgccgccag cgccgcgatg attgccgggt ctatgccctc ttgccgggcg
     1321 atgggcgcgt ggatcgccca ttcgaccggc tgatcccaga aacgcgccgt gcacaggatc
     1381 gccaattccg tcaatcgacg cccgatcacg ctgtcatagc gcagatattc gcccacgcgc
     1441 tgcacgcggt ccatcagttg ggggctacgc atgagcggca cgaaggggct gacgatggcc
     1501 ttgcgcggcc cctccagcat gggctctaca tgtctgcgct gcgcgtcggt ccagtcgact
     1561 tcggggatcg gggggtagcg gtcggggcca ggcggtttca accaagaccc tcccacatgg
     1621 cggcaaggtc gctactggcg tcgatattgg gcaggcgtgc cgccaccgca taacgcccgc
     1681 tgctgaacag tagcgggctg gcggcatcgt cgaaagaggc gcgcaccacg cggcccagca
     1741 ggatcacgtg atcgccggcc gggatgctgc gatcgagatc gcattcgaac aaggccagcg
     1801 cgcccttcag cacagggcac ccgccatgcc cgtcggcaca ggcgatgccg gcgaacttgt
     1861 ctgcccgggg ggtggcgaaa tggtgcgaca gatccgcctg ctcctgggtc aggatgttca
     1921 cggcgaacac cccggcgtca aggaatgcgc gcagggacgg cgcctcgttg cgcacgctcc
     1981 acaggatcag cggcggatcc agcgacacgg ccgagaagga attggccgtc accccgatgc
     2041 ggctaccgcc tggcgcgcgg gtggtgatga cggtgacgcc ggtcgagaac cggcccagag
     2101 cctgccggaa caggcgggaa tccggcggcg ccgctttgtc gaaagacagg acgtgtcggg
     2161 tcatgatgtc ctcgcagaca ggaagtcgcc gccatccttt caggttcggc ttcggggggg
     2221 aaacaagaaa atctgctggc ccgcatcaac cgtgcttcaa cctgatgaga gccagaagaa
     2281 aacatgattt caactgcgtc ggcattcttc ataatctttc ccgaacggag gtcgtgatgc
     2341 aggcagcaca ggcagcgggc cgcgctaggt cagcaccggg ggatccggcg tgacgcggca
     2401 tgttacggcg gaacgattgc agacccttgc cgccggggtg cttggggccg agggcttgcc
     2461 gcctcaggag gcggcgatcg ttgccgagat gatgatcgag gccgatcttc tgggggccga
     2521 tggtcacggc atctttcgcc tgccgcgtta tctggagcgc ctgcgcgccg gcggcttcaa
     2581 cgcccggccc aatatccgga tcgcgcgcga gcggggcgcg atggcgctgg tggatggcga
     2641 caacgggttc ggtcatctgg tgatgaagtt ttgcgccgat gaagccgtca ggcgcgcgcg
     2701 cagccacggc atcggctggg tcggggcgca tcactcgaat cacgcgggcg cggcgggtgt
     2761 ctatgccctg atcccgctgg cccacgacat gatcggattc tatgtcgccg tgggcagcgc
     2821 caatcacatg gcgccctggg gcggtctgga aatgctgctc agtacgaatc cgatcgcggt
     2881 ggccatccct gcggcggggc gcaggccggt gttgctggac atggcgacga cggttgcggc
     2941 ctatggcaag gtcaagcttg ccgcgcagcg aggcgagacc atgccgcccg actggatgat
     3001 cgatgcccag ggcaacccgc tgacggatcc cgcgcgtgcg ggcgagggaa cgctcatgcc
     3061 catcggcggg cccaagggat acggcctggc gctgatcttc gggctgctgg ccggcacgtt
     3121 gaacggggcc gccttcgggc gcgatgtgat cgactacaac catgacgatt cgagcgtcgc
     3181 caataccggg catttcgtcg tggccatcga tatcgccagc tttggcgatc ttgaacattt
     3241 caaggccgag gtggcgcgca tcggcgacga aattgcgggc tcggtgcgcc ggcccggttt
     3301 tgatgcgatc cgcctgccgg gcgaacgcgc cctgtccgtg cgcgagaaac gcctggccca
     3361 tgggatcccg gttcctccgg ccctgctgga gaagcttggc gctatcgccg cggcttgcgg
     3421 cctgccaagc ttgcaggatc agccggaatg acgcgccgga ccgccatgat ccggcacctt
     3481 gaggcgatcg acgaatttga ccggggcaac ggtgtcgtca cgcgcctgtt ttgcaacgcg
     3541 gacatttgcg gtgctcaggt gacgaccggg accacggtgc tgcccgtcgg caagagcgtg
     3601 gccatgcatt atcacaactg cgatgaacag atcgtcattc tcgcgggccg cgccgaagcc
     3661 gagttccagg ggcatcggcg tcccatcggc ccgatggaag tcgcctatat tcccaggggc
     3721 gaggtgcatt gctttcacaa tgtcggcgac cagccggtgc tgatgctgtt catctatgac
     3781 gccggcgagg tgacgcggac cttcgaggcc accggagaaa cggtcgttca tctgggtgcg
     3841 ggcgatcgcg cgcagccgaa gggataaggc gacggacccg accgctgcaa gccgcgcagg
     3901 ccggcgcgac tggtcatgtc catctgttcc ggcgcggctt gaaggcgcgc ttgtcctgcc
     3961 cggatcgcgc tttttgcaat tcgggcggcc gggcggggcc ggtgtgacca tcgcggcggt
     4021 gtttctcttc ggtgataggt ccggccatac cctgcgctga tagacatcag cgattctttt
     4081 aatttctgca ggttcatacg cctccttatc ctttcgccaa atgcgagggg aggaatccgc
     4141 atggcggtaa ggaatgaa
//
LOCUS       DTVW01000223            1000 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1289895, whole
            genome shotgun sequence.
ACCESSION   DTVW01000223 DTVW01000000
VERSION     DTVW01000223.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1000)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1000)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1000
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1289895"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..186)
                     /locus_tag="EYO87_03015"
     CDS             complement(<1..186)
                     /locus_tag="EYO87_03015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007117925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit J"
                     /protein_id="HIC64970.1"
                     /translation="MTDVAFYLLSGFAIWTGWRVFRVDSMIRATFLLLLSFTSVGLIG
                     LLLSASYLGAATIFMMAV"
     gene            complement(192..>1000)
                     /locus_tag="EYO87_03020"
     CDS             complement(192..>1000)
                     /locus_tag="EYO87_03020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007117926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit H"
                     /protein_id="HIC64971.1"
                     /translation="VGMAATDPLRAVVADYLRQRTDTEAPDHLNWLLAPGYYFLLAVV
                     GLALVPFAPDQSLIALDTSVVLWGAAEAVVVVAVFLHGWSPNAPFPLIGAYRYVAIGL
                     PVMLLSMFVLIAASIPAQSLDLRAVVESQRGLWNVIRQPLGLPLFLAVVMSLTLRGPF
                     DYADSADLAGGTSAEDGGPRWIAWQTARAAMLVAACAIAATAFLGGYLGPVLPGWLWL
                     SLKTLAVMVAVVLLTHLVPRMPVARMLTLIWIVLLPIAFLDLLIAGLGAL"
BASE COUNT          236 a          349 c          311 g          104 t
ORIGIN      
        1 caccgccatc atgaagatcg tcgcggcacc gagataactg gctgacagaa gcaggccgat
       61 caggccgacc gaggtgaagg acaaaagcag caggaaggtc gcacggatca tcgaatcgac
      121 gcgaaagacg cgccagccgg tccagatcgc aaatcccgaa agcaggtaga atgccacgtc
      181 ggtcatcgtc atcacagcgc ccccagcccg gcgatcagca agtcgaggaa cgcaatcggc
      241 agcagcacga tccagatcag cgtcagcatc cgcgccaccg gcatccgcgg gacaagatgc
      301 gtcagcagga ccaccgccac catcaccgcc agcgtcttga gcgaaagcca gagccagccc
      361 ggcaggaccg gcccaagata gccgccgagg aacgccgtcg ccgcgatcgc gcatgccgcg
      421 accagcatcg ccgcgcgcgc cgtctgccag gcaatccagc gcggtccacc atcctcggcc
      481 gaggtgccgc cggccagatc ggcgctgtcg gcatagtcga acggcccccg cagcgtcagt
      541 gacatcacca ccgccagaaa caacggcaat cccagcggct ggcggatcac gttccacagg
      601 ccgcgctgcg attcgaccac cgcgcgcagg tcaagcgact gggccggtat cgacgccgcg
      661 atcagaacga acatcgacag cagcatcacc ggcagaccga tcgcgacata gcgataggcg
      721 ccgatcagcg gaaacggcgc gttgggcgac cagccgtgca gaaagaccgc gacgacgaca
      781 acggcctcgg ccgcgcccca cagcaccaca ctggtatcca gcgcgatgag ggattggtcc
      841 ggggcgaagg gaaccagcgc caggccgacc accgcaagca gaaaataata acccggcgcc
      901 agaagccagt tcagatggtc gggtgcctcg gtatcggtgc gctggcgaag atagtcggcg
      961 accacggccc gcagcgggtc cgtcgcggcc atgccgaccg
//
LOCUS       DTVW01000224            1186 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1290500, whole
            genome shotgun sequence.
ACCESSION   DTVW01000224 DTVW01000000
VERSION     DTVW01000224.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1186)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1186)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1186
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1290500"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..372)
                     /locus_tag="EYO87_03025"
     CDS             complement(<1..372)
                     /locus_tag="EYO87_03025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobaltochelatase subunit CobS"
                     /protein_id="HIC64972.1"
                     /translation="MLDMNAKPTEEIDLRETFGLDSDMKVRGFAERSDRVPEIDSTYK
                     FDPDTTLAILAGFAYNRRVMIQGYHGTGKSTHIEQVAARLNWPCVRVNLDSHVSRIDL
                     IGKDAIKLVDGKQVTVFHEGIL"
     gene            492..1058
                     /locus_tag="EYO87_03030"
     CDS             492..1058
                     /locus_tag="EYO87_03030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009807464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HIC64973.1"
                     /translation="MNVALKEARRVELEEMIARVALADREAFDALYDATSAKLHAVCL
                     SLLKDRPEAEETLQEVYVRIWQNAARYASNGLSPMTWLITIARNRSIDRLRARKSRPA
                     TAPAEAADAVPSAEPGPEAATIRAQERRMLDECLAQLGEPQAGAVRAVYLEGETYADL
                     AAREGKPINTVRSWLRRSLLRLKDCVGQ"
BASE COUNT          199 a          387 c          397 g          203 t
ORIGIN      
        1 caggatgcct tcgtgaaaca ccgtcacttg cttgccatcg accagcttga tcgcgtcctt
       61 gccgatcagg tcgatgcggc tgacatggct gtccaggttg acgcgcacac acggccagtt
      121 aagccgggcc gccacctgtt cgatatgggt ggacttgccg gtgccgtgat agccctggat
      181 catcacccgg cggttatagg caaagcccgc gaggatcgcg agcgtggtgt cggggtcgaa
      241 cttgtaggtg ctgtcgatct cgggcacccg gtcgctgcgc tcggcaaagc ccctgacctt
      301 catgtcgctg tccagcccga aggtttcacg caggtcgatt tcctcggtgg gtttggcgtt
      361 catgtccagc atcatcgggc cctttcctcg caacgccgcc ttgatcgcgc attcgtgcgg
      421 cgcgcgcaag acagggtcgc gttgacgtgt gcgaagaccc tgcctaatct gccctgcgaa
      481 caaggatggg aatgaacgtg gctttgaaag aggcgcgcag ggtcgagctg gaggaaatga
      541 tcgcgcgggt ggccctggcc gaccgcgagg ccttcgatgc gctgtatgac gcgacctcgg
      601 cgaaactgca tgcggtctgc ctgtcgctgc tgaaggaccg tcccgaagcc gaagagaccc
      661 tgcaagaggt ctatgtcagg atctggcaga atgcggcgcg ctatgcctcg aacggcctgt
      721 cgccgatgac ctggctgatc accatcgccc gcaaccgctc gatcgaccgg cttcgggcgc
      781 gcaagtcccg tcctgccacg gcgccggccg aggccgccga cgcggtcccc tcggccgagc
      841 ccggccccga ggccgcgacg atccgcgccc aggagcgccg gatgctggat gaatgccttg
      901 cacaactggg cgagccgcag gccggtgccg tccgcgccgt ctatctggaa ggggaaacct
      961 atgccgatct ggccgcccgc gagggcaagc cgatcaacac cgtccgcagc tggctgcgcc
     1021 gcagcctgtt gcgcctgaag gattgcgtgg gtcaatgaac gaggacacgc ccctgacccc
     1081 ggaacaggaa gacgacgcgc tggcggcgga actggccctt ggcctgcttg acggggacga
     1141 ggcacaggcc gccgtcgcgc ggctggccgt cgccgatgag ccgccg
//
LOCUS       DTVW01000225            2747 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1290828, whole
            genome shotgun sequence.
ACCESSION   DTVW01000225 DTVW01000000
VERSION     DTVW01000225.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2747)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2747)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2747
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1290828"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(277..960)
                     /locus_tag="EYO87_03035"
     CDS             complement(277..960)
                     /locus_tag="EYO87_03035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008182062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAA hydrolase family protein"
                     /protein_id="HIC64974.1"
                     /translation="MPDHVIPTPQAHVIPAGDGGSFPVRRVYCIGRNFAAHAVEMGHD
                     PDREPPFFFQKNPDNLDPSGEFPYPPHSSDVHHEVELLVGLKSGGTNIPLDRALDHVW
                     GYGVCLDMTRRDLQGEAKKLGRPWEIGKAFERSGPVGPLRPVSELGHPDQGRIELKVN
                     GELRQEGDLNQMIWKVPEMISYLSEYFELAAGDVIMAGTPSGVNAIAKGDVLEAAIEG
                     VGTLTVKVV"
     gene            complement(1146..1820)
                     /locus_tag="EYO87_03040"
     CDS             complement(1146..1820)
                     /locus_tag="EYO87_03040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007204104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FadR family transcriptional regulator"
                     /protein_id="HIC64975.1"
                     /translation="MTTDLTKRLRDLIDDAGYRHNDRIPPERDLCMRLGTTRNQLRKS
                     LSELEAQGRIWRHVGRGTFVGARPVLNLQDVTYLRDQIKPEQVVTVRLNIEPELSRLA
                     AQHAGKTDCEQMKLCAEKCRNAEDWRAYEAWDNHLHHAIARATRNQLYLYFFETLNSV
                     RRSIVWGQPRETRAPATDYSSFREHDEIVAAIIAGQGELAAIAMRHHLRSVYSRVLPD
                     IVPEDG"
     gene            1954..>2747
                     /locus_tag="EYO87_03045"
     CDS             1954..>2747
                     /locus_tag="EYO87_03045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007204103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAA hydrolase family protein"
                     /protein_id="HIC64976.1"
                     /translation="MRLATISVGEQDVCVAILKNGKRLDIAKAARGISGSGADALRAG
                     SMQGLIEGGDQAVAALGRLVADAEAGNHADALAPANAALLAPIPAPRKNVFCVGRNYA
                     EHIAEGDRAQKQDVGVTRHPVFFSKPITSIVPPGGNILVFPDLSECIDYEVELAVVIG
                     TAGRNIAKADAMNHVFGYTILNDISARDIQRRHGGQYFKGKGLDGSCPIGPWIETADA
                     IADPHALSIGTRVNGEQRQDGTTADMIFDIPTLIASLSEGMTLEPG"
BASE COUNT          529 a          827 c          853 g          538 t
ORIGIN      
        1 cgccgaaaag cggctggtct cgatttcgga ggtgctgcct tgagcaaatc gttcgaattc
       61 gtcaccggcc aatgcgcgat cgggcctcca aggtgcaagc cggcgggcgg tgcctggcga
      121 aacccgcgtc cagtccgata atgtcgatcc tgcggcacac gcagcagtat cgcgcagatt
      181 ggtccttgcg ccgagccctt gaaagcaggt gcatggaaaa gacgatggtg aggcatcgca
      241 tgcagcgtcg ccccggccgg atctgtccct gtgaaatcag acgaccttga cggtcagcgt
      301 tccgacgcct tcgatcgcgg cttccagcac gtcacccttc gcgatggcgt tcacacccga
      361 cggcgttccg gccatgatga cgtcgccggc cgccagctcg aaatattctg aaagatacga
      421 gatcatctcg ggcaccttcc agatcatctg gttcaggtct ccctcctgcc gcagctcgcc
      481 gttgaccttc agctcgatcc gtccctgatc gggatggccg agctcggaga caggccgcag
      541 cggaccgacc gggccagagc gttcgaatgc cttcccgatt tcccacgggc gacccagctt
      601 cttcgcctcg ccctgaagat cgcgccgcgt catgtcaagg caaacgccat aaccccagac
      661 gtgatccaga gcccggtcca gcgggatgtt cgtgccgccg gatttcagac cgacaagcag
      721 ttctacctcg tgatgaacat ccgacgagtg gggcggatag ggaaattcgc ccgatggatc
      781 caggttgtcg gggttcttct ggaagaagaa cgggggctcg cgatcgggat catgccccat
      841 ttcgaccgca tgggccgcaa agttgcggcc gatacagtaa acgcgccgca cgggaaagct
      901 gccgccgtcc ccggcgggaa tgacatgcgc ttgcggtgtg gggatgacat gatccggcat
      961 tgctgttctc ctgaacgctt ggtggtcgaa gacccgatcc gtgattgatc gcgcgacgtc
     1021 tttcacgccg gccgagaaga cggcgccttc gaccgattat tcgaagaatt cgcgcatgat
     1081 tggcaagtgg tcgcgagggt cgcacgaaca accattttcc agattggttc cggcatccgg
     1141 cgacctcagc cgtcctcggg gacaatgtcg ggcaagacgc gggaatagac cgaacgaaga
     1201 tgatgccgca tcgcgatggc ggcaagttcg ccctgaccgg cgatgatggc ggcgacgatt
     1261 tcatcgtgtt cgcggaagct ggaataatcg gtggccggcg cgcgggtttc gcgcggttgc
     1321 ccccagacga tggaccggcg caccgagttc agcgtctcga agaaatagag atacagctgg
     1381 ttccgggtgg cccgcgcgat ggcgtggtgc agatggttgt cccatgcctc gtatgcgcgc
     1441 caatcttcgg cgttcctgca tttttcggca catagcttca tctgttcgca gtcggttttg
     1501 ccggcgtgct gtgcggccag ccggctcagt tccggctcga tgttgagccg aacggtcacc
     1561 acctgttcgg gtttgatctg gtcgcgcaga taggtcacgt cctgaagatt gagaacgggt
     1621 cgcgcgccga caaaggtgcc tcgaccgaca tgacgccaga tacggccttg cgcttccagt
     1681 tcggacaagg atttgcgcag ttggttccgc gtcgtgccca ggcgcatgca cagatcgcgt
     1741 tccggcggga tccggtcgtt gtgccgatac ccggcatcgt cgatcagatc ccgaagcctc
     1801 tttgtcagat cggtggtcat gatctctccc aattccctaa ttggttgatt gatcgcttcc
     1861 gagagatatt caaacatttc ctcaagaatg tggcagcgag tcgcagttct gttcgctctg
     1921 acgccacatg ttatcacgag ggagggatgc cgagtgcgac tggcaacgat ttccgtgggc
     1981 gaacaagacg tctgcgtcgc aattctgaag aacggcaaaa ggctggacat cgcgaaagcc
     2041 gctcggggta tttccggatc gggtgccgac gcgcttcggg ccggttcgat gcagggcctc
     2101 atcgaaggcg gcgaccaagc ggttgccgcg cttggacgtt tggtggccga tgccgaggcc
     2161 gggaaccatg ctgacgccct tgcgccggcg aacgcggcct tgcttgcacc gataccggcc
     2221 ccgcggaaga acgtcttttg cgtcggacga aactacgcgg aacacatcgc cgagggcgac
     2281 cgcgcgcaga aacaggatgt gggcgtgacc cggcatccgg tctttttcag caagccgatc
     2341 acgtccatcg ttccgccagg cggaaacatc ctggttttcc cggacctgtc cgaatgcatc
     2401 gactacgagg tcgagttggc cgtcgtgatc gggacggccg gccggaacat cgccaaggcc
     2461 gatgccatga atcacgtctt cggatacacg atcctcaacg acatctctgc acgggacatc
     2521 cagcgtcgcc acggcggcca gtatttcaaa ggcaagggac tggacggatc ctgtccgatc
     2581 ggcccctgga tcgaaaccgc ggacgccatc gccgacccgc acgcgttatc catcgggacc
     2641 agggtcaatg gcgagcaacg tcaggatggc accacggccg acatgatttt cgatatcccg
     2701 acgctgattg cgtcgctgtc ggaaggaatg acgctggagc ccggcga
//
LOCUS       DTVW01000226            3189 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1290977, whole
            genome shotgun sequence.
ACCESSION   DTVW01000226 DTVW01000000
VERSION     DTVW01000226.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3189)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3189)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3189
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1290977"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1361)
                     /locus_tag="EYO87_03050"
     CDS             complement(<1..1361)
                     /locus_tag="EYO87_03050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018001013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-synthetase adenylyltransferase"
                     /protein_id="HIC64977.1"
                     /translation="MKFSARISRQPIPVDDDRARHIREIFDPGGALSDLVAGAAGSSP
                     HLADLIEKEAGWLAGALDDDDVVARETAGFEDLDSAALSVALRRAKRRVALFVALADL
                     GGVWSLEQVTGALSDLADRAVDLALRVHVAQEAGRGKLPENNADCGGVFALAMGKGGA
                     RELNYSSDIDLIVLFDETAYAEADQADARAALIRVTRKMAATLSDVTEHGYVFRTDLR
                     LRPDASVTPVCISTAAALAYYEAEGRTWERAAFIKARAAAGDVAAGLRFLRDLRPFVW
                     RKHLDFAAIQDAHDMRLRIRDHKNLGGRLDVPGHNMKLGRGGIREIEFFTQTRQLIAG
                     GRDPDLRCRDTVGGLAALAAKGWTPDDVAAELADHYRKHREIEHRIQMVHDAQTHSLP
                     RDGEGLARIAALMGEADPAAWAARLKARLARVHELTEAFFAPGEAPDRPEISAGSRAV
                     IDR"
     gene            1552..2391
                     /locus_tag="EYO87_03055"
     CDS             1552..2391
                     /locus_tag="EYO87_03055"
                     /EC_number="2.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginyltransferase"
                     /protein_id="HIC64978.1"
                     /translation="MRHTVPHAPQFYVTAPQPCPYLHGRAERKLFTALHGENAAELNN
                     ALSRQGFRRSQNVLYRPSCESCVACMSARIRVADFEPSRTQRRLARRNEGVRRLATSA
                     WATEEQFDLFRSYLDHRHADGGMADMDIFEFAAMIEETPVKTRVIEYRCDGREPVRLA
                     AGDDHLAAVCLTDVLDDGLSLVYSFYDPDLSSASLGTYLILDHIEIARAAKLPYVYLG
                     YWVPGSRKMDYKARFSALEIYKGGVWQDIGDPADHSNEAHPLSVDPIVEQVARIALPQ
                     FDR"
     gene            2575..>3189
                     /locus_tag="EYO87_03060"
     CDS             2575..>3189
                     /locus_tag="EYO87_03060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018001011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase 3 large subunit"
                     /protein_id="HIC64979.1"
                     /translation="MVVEALRDQGVDTVFGYPGGAVLPIYDEIFQQNDITHVLVRHEQ
                     GAVHMAEGYARSTGKPGVVLVTSGPGATNAVTGLTDALLDSIPLVVLSGQVPTFLIGT
                     DGFQEADTVGITRPCTKHNWLVKDTAKLAETIHKAFHVATSGRPGPVLVDIPKDVQFA
                     TDDYVGPKQLEPSKYQPRMKGDIAAITRLVEMIEQAERPILYTGG"
BASE COUNT          570 a         1062 c         1011 g          546 t
ORIGIN      
        1 cagcgatcga tgacggcgcg cgacccggcc gagatttcag gccggtcggg ggcctctccg
       61 ggcgcgaaga aggcctcggt caattcgtga acccgcgcca gccgggcctt cagccgcgcc
      121 gcccatgccg ccggatcggc ctcgcccatc agggcagcga tgcgggccaa tccttcgcca
      181 tccctgggca gcgaatgggt ttgagcatcg tggaccatct ggatgcgatg ttcgatctcg
      241 cgatgcttgc ggtagtggtc ggccagctcg gcggccacat catccggcgt ccagcccttc
      301 gccgccaggg ccgccaggcc gcccaccgtg tcgcggcaac gcagatcggg gtcgcggccc
      361 ccggcgatca actgccgggt ctgggtgaag aattcgatct cgcgaatgcc gccccgcccc
      421 aacttcatgt tgtggccggg cacatccagc ctgccgccca ggttcttgtg atcacggatc
      481 cgcaggcgca tgtcgtgcgc gtcctgaatg gccgcgaaat ccaggtgctt gcgccagaca
      541 aagggccgca gatcgcgcag gaagcgcagg cccgcggcga catcgcccgc cgccgcgcga
      601 gccttgatga aggcggcgcg ttcccaggtc cggccctcgg cctcgtaata ggccagcgcg
      661 gcggcggtcg agatgcagac cggcgtcacc gaagcgtcgg gacgcaggcg aagatcggtc
      721 cggaagacat aaccatgttc ggtcacgtca gacagcgttg ccgccatctt gcgggtgacg
      781 cggatcaggg cggcgcgggc atcggcctga tcggcctcgg cataggcggt ttcgtcgaac
      841 agcacgatca ggtcgatgtc cgagctgtag ttcagctcgc gcgcgccgcc cttgcccatg
      901 gccagcgcga aaacaccgcc gcaatcggca ttgttttcgg gcagtttgcc gcgcccggcc
      961 tcttgcgcga catggacgcg cagcgccaga tcgacggcgc gatcggccag atcggacaac
     1021 gcccccgtca cctgttccag cgaccagacc ccgcccagat cggccagcgc gacaaacaat
     1081 gccacccggc gcttggcccg acgcagcgca accgacagcg cggcagagtc cagatcctcg
     1141 aaacccgccg tctcgcgtgc gaccacatca tcatcgtcca gcgcgccggc cagccatccg
     1201 gcctctttct cgatcagatc ggccagatgc ggactgctgc cggccgctcc ggccacaagg
     1261 tcggacagcg cgcccccggg atcgaagatt tcgcggatgt gacgcgcacg gtcgtcatcg
     1321 acggggatgg gctggcggct gatgcgtgca gagaatttca tcgccacaga ttagggccgc
     1381 cggacccgcg ggggcaatat ggtgcggcgc gaagctgtta accctttcga tgcttggcct
     1441 gtcatcgaaa cgttgctagg cttcgctcca gtgcaacaat caggcgatcc ccggacgttt
     1501 ctcgcgcatg gcaagccttg acccgtcatc ccgtcgctgg gggcgcaact gatgcgtcat
     1561 accgtccccc atgcgccaca attctatgtc acggccccgc agccgtgccc ctacctgcat
     1621 ggccgggccg agcgcaagct gttcaccgcc ttgcacggcg aaaacgcggc cgagttgaac
     1681 aacgcgctgt ctcgacaagg ctttcgccgg tctcagaacg tcctttaccg tcccagttgc
     1741 gaaagctgcg tcgcctgcat gtcggcccgg atccgggtcg cggatttcga gccctcgcgc
     1801 acccagagga ggctggcgcg ccgcaacgag ggggtgcggc ggctggcgac cagcgcctgg
     1861 gcgaccgaag agcaattcga tctgttccgc agctacctgg accaccgcca cgccgatggc
     1921 ggcatggccg acatggatat cttcgaattc gccgccatga tcgaggaaac gccggtcaag
     1981 acgcgggtga tcgaatatcg ctgcgacggg cgcgagcctg tcaggctggc cgcgggcgac
     2041 gaccatctgg ccgctgtctg cctgaccgac gttctggatg acggtctgag cctggtctac
     2101 agcttctacg atccggacct gagcagcgcc agcctgggca cctatctgat cctcgaccat
     2161 atcgagatcg cgcgcgccgc gaagctgccc tatgtctatc tgggctattg ggtgccgggc
     2221 agccgcaaga tggactacaa ggcccggttc tccgcgctgg aaatctacaa gggcggcgtc
     2281 tggcaggata tcggcgatcc tgcggaccat tcgaacgaag cgcatccgct gtcggtcgat
     2341 ccgatcgtcg aacaggtcgc gcgcatcgcg ctgccgcaat tcgaccgctg agccggtcag
     2401 cgacgaaaga aaattacaat tcccggctgc attgcgtcat tttctccgcc ggatcccatt
     2461 gaccctttcc ggaagcgacc atagtttgcg ccgacgcgcg ggctggatgc tgtggcccgc
     2521 gatgacatat ctgatggagt ggaaacgatg tcccgaacga tgacgggtgc gagaatggtt
     2581 gtcgaggcgc tgcgcgatca gggcgttgat accgtattcg gctatccggg cggagcggtg
     2641 ctacccatct atgacgaaat tttccagcag aacgacatca cccatgttct tgtccggcac
     2701 gaacagggcg cggtccacat ggccgaaggc tacgcccgct cgaccggcaa gccgggtgtc
     2761 gttctggtga catccggccc cggcgcgacc aatgccgtga ccgggctgac cgatgccttg
     2821 ctggattcga ttccgctggt cgtgctgtcg ggacaggttc cgaccttcct gatcgggacg
     2881 gacgggttcc aggaggccga tacggtcggc atcacccgac cctgcaccaa gcataactgg
     2941 cttgtgaagg ataccgcgaa actggccgag acgatccaca aggcattcca tgtcgccacg
     3001 tccggccgtc cgggtccggt gctggtggac attccaaagg atgttcagtt cgccaccgac
     3061 gattatgtcg gccccaagca gctggagccg tcgaaatacc agccccggat gaagggcgac
     3121 atcgccgcga tcacccgtct ggtcgagatg atcgaacagg ccgagcgtcc gatcctctat
     3181 accggcggc
//
LOCUS       DTVW01000227            2085 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1291071, whole
            genome shotgun sequence.
ACCESSION   DTVW01000227 DTVW01000000
VERSION     DTVW01000227.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2085)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2085)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2085
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1291071"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1854
                     /locus_tag="EYO87_03065"
     CDS             <1..1854
                     /locus_tag="EYO87_03065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011747042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4040 domain-containing protein"
                     /protein_id="HIC64980.1"
                     /translation="NHATFKASLFMTAGIIDHETGTRSIRRLGGLRRLMPITFAIGTI
                     AALSLAGIPPLNGFLSKEMMLAELSDLEIARQTFMIVGTVAALFSVGYSLRFIVHTFF
                     GQERDDYPHRPHDPGFGLYSWPALLALLVILIGLFPNTMAGWLVDASAAAVTGEAQSS
                     DIYLWHGVNAALIMSTIAVLGAVVLLGLHRPLLAAWNAAPRPEAKTIYDWLLLRLVFA
                     ARGFTDNMTNGAMPRALAAFTLTTLFAGTLAWYTGAAGPATRDMLPIKLVPAIGWVLA
                     MVATGLMVTFHRVRVLALVLVGIVGLMTSAFFAYFSAPDLALTQISVEVVTVILLLLV
                     LNFLPKRTLVESGATQRGWDAFVATLAGVGFGGLTYAVLRRDFAFDPISGYMLENSYE
                     KAGGTNVVNVILVDFRGYDTFGEITVLGIAALAIFALTQTLLQGKSAKRLRNWTYDQR
                     RAGDRHPLMLVIATRVLLPITLVVGIYIFLRGHNQPGGGFIAGLVVAIALLMQYMASG
                     YAWAQERQTLPYHALIGAGVVAAGATGIGAWFNGRPFLTSAYGYIKLPFLEKIGLSSA
                     IGFDLGVFLSVVGAVMLALNSLSRIARQAGEKVNTKPMDIDLSEDQPEGAK"
     gene            1855..>2085
                     /locus_tag="EYO87_03070"
     CDS             1855..>2085
                     /locus_tag="EYO87_03070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002932377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter subunit C"
                     /protein_id="HIC64981.1"
                     /translation="MELLVATAIGAITAAGVYLILRLRTFAVVLGMTMLTYAINAFLF
                     VTGRLVVNMPPILSSHDNISPADYTDPLPQALV"
BASE COUNT          314 a          689 c          657 g          425 t
ORIGIN      
        1 aaccatgcga ccttcaaggc gtcgcttttc atgaccgccg gcatcatcga ccacgaaacc
       61 ggcacccgct ccatcaggcg gctgggcggg ctgcgcaggc tgatgccgat cacctttgcc
      121 atcggcacca tcgcggcgct gtcgctggcc ggcattccgc cgctgaacgg ctttctgtca
      181 aaagagatga tgctggccga gctgagcgac cttgaaatcg cgcggcagac cttcatgatc
      241 gtgggcaccg tcgcggcgct gttctcggtg ggttattcgc tgcgcttcat tgtccacacg
      301 ttcttcggcc aggaacgcga cgattatccg catcgcccgc acgatccggg attcggcctc
      361 tattcctggc ccgcgcttct ggccttgctg gtcattctga tcggtttgtt tcccaacacc
      421 atggcgggct ggctggtcga tgcctcggcc gccgcagtga cgggcgaggc acaaagttcc
      481 gacatctatc tgtggcatgg cgtgaacgcg gcgttgatca tgtccacgat cgcagtcctg
      541 ggcgccgtgg ttctgctggg cctgcaccgc cccctgcttg cggcctggaa cgccgcgccg
      601 cggcccgagg ccaagaccat ctacgactgg ctgcttctgc gcctggtctt cgcggcgcgg
      661 ggctttaccg acaacatgac caatggcgca atgccgcgcg cgctggcggc ctttaccctg
      721 accacgctgt ttgccggcac gctggcctgg tatacgggcg cagccggtcc ggcgacgcgc
      781 gacatgctgc ccatcaagct ggtccccgcg atcggctggg tgctggcgat ggtggcgacc
      841 gggctgatgg tcacgttcca ccgggtccgc gtcctggcgc tggttctggt cggcatcgtc
      901 gggctgatga cttcggcctt tttcgcctat ttctcggcgc ccgaccttgc cctgacgcaa
      961 atctcggtcg aggtggtgac ggtcatcctg ctgctgctgg tgctgaactt cctgccaaag
     1021 cgcacattgg tcgaatccgg cgcaacgcag cgcggctggg atgcctttgt tgcgacgctg
     1081 gcgggcgttg gctttggcgg gctgacctat gccgtcctgc gccgcgactt cgcctttgac
     1141 ccgatctcgg gctacatgct ggaaaacagc tacgagaagg ccggcggcac caatgtggtc
     1201 aacgtgatcc tggtggattt ccgcggctat gacaccttcg gcgagatcac cgtcctgggg
     1261 atcgcggcac tggccatctt cgcgctgacc cagaccctgc ttcagggcaa atccgccaag
     1321 cgcctgcgca actggaccta tgatcagcgc cgcgccggtg accgccaccc gctgatgctg
     1381 gtgatcgcga cgcgggtgct gctgccgatc acgctggtcg tcggcatcta tatcttcctg
     1441 cgcggccaca accagcccgg cggcggcttt atcgccggtc tcgtcgtcgc catcgccctg
     1501 ctcatgcaat acatggcctc gggctatgcc tgggcgcagg aacgccagac cctgccctat
     1561 cacgcgctga tcggggcggg ggtggtcgcg gcgggcgcca cgggcatcgg cgcctggttc
     1621 aacggccggc ccttcctgac ctcggcctat ggctatatca agctgccatt cctggaaaaa
     1681 atcggactgt cctcggccat cgggtttgat ctgggcgtgt tcctttcggt cgtgggggcg
     1741 gtgatgctgg cgttgaactc gctgtcacgg atcgcgcgcc aggcgggcga gaaggtgaac
     1801 acgaaaccga tggacataga cctcagcgag gatcagccgg agggggcgaa gtagatggaa
     1861 cttctcgtgg ccaccgcgat cggcgcgata accgccgcag gcgtctacct gatcctgcgc
     1921 ctgcgcacct tcgccgtcgt tctgggcatg acgatgctga cctacgcgat caatgcattc
     1981 ctgttcgtca ccggccggct ggtcgtcaac atgccgccga tcctgagcag ccacgacaac
     2041 atttcgccgg ccgactacac cgatcccttg ccgcaggcgc tggtg
//
LOCUS       DTVW01000228            2837 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1292723, whole
            genome shotgun sequence.
ACCESSION   DTVW01000228 DTVW01000000
VERSION     DTVW01000228.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2837)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2837)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2837
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1292723"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..344)
                     /locus_tag="EYO87_03075"
     CDS             complement(<1..344)
                     /locus_tag="EYO87_03075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008282908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HIC64982.1"
                     /translation="MTATKIGYARCSTDRQDLTAQRAALAELGVTEDRIYTDHGLTGT
                     NRDRPGLAQALAAVRAGDVLVVPKLDRLARSVPDARAIAEQLEKKGVKLALGASVYDP
                     SDPMGKMFFNILA"
     gene            510..1709
                     /locus_tag="EYO87_03080"
                     /pseudo
     CDS             510..1709
                     /locus_tag="EYO87_03080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612398.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4158 domain-containing protein"
     gene            1793..2401
                     /locus_tag="EYO87_03085"
                     /pseudo
     CDS             1793..2401
                     /locus_tag="EYO87_03085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_036744399.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5-like element ISPha2 family transposase"
     gene            2506..>2837
                     /locus_tag="EYO87_03090"
     CDS             2506..>2837
                     /locus_tag="EYO87_03090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004118319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HIC64983.1"
                     /translation="MIHMGLLNIIRRMHLRQNLSVREIARRTGLSRNTITKHLAADTI
                     EPKFATPDRPSKLDPFAEKLAGWLKTEAGKSRKQRRTLKQMHADLVKLGFTGSYNRVA
                     AFARQWRT"
BASE COUNT          529 a          864 c          913 g          531 t
ORIGIN      
        1 gcgaggatgt tgaagaacat ctttcccatc gggtcggacg gatcgtagac cgatgcgccg
       61 agggcaagct tgacgccctt cttttccaac tgttccgcga tggcccgtgc gtcagggacc
      121 gagcgcgcga ggcgatcgag tttcggtacg accagtacgt cgccagcgcg cacggcggcg
      181 agggcctggg cgagaccggg ccggtcgcgg ttcgtacccg tcaggccgtg atcggtgtag
      241 atgcggtctt cggtgacccc aagctcagca agggcagccc gctgcgccgt cagatcctgg
      301 cggtcggtgg agcagcgggc atagccaatc ttggtcgcgg tcatgcagcg agtgtacgga
      361 taaggggccg catgtgcgaa tctaatcgta ctatctatac gagatatggc gggatgcgct
      421 ttccttgccg ccctccgcca cctcgaccca tgtccgctga ccgatcctct tacggacggt
      481 cgttcaccgc gatttcctga aagattgcca tgccaagacg cagcatcctg accgaccgcc
      541 aacgggcggc attgttcgat ctgccgaccg atgaagcgtc gatgctgcgc cactacacgc
      601 tggcagacga cgatctggag ctcatccatg cccgtcgccg ttcccacaat cgcttcggtt
      661 ttgcgttgca actatgcgcg ctgcgatatc ccgggcggtt gctggcgccg ggcgaggtca
      721 ttccgttagc agtcacacgc tttctggcag cgcagcttgg gataaggccc gacgaattgg
      781 ccggctacgc cgcccgcgag gagacccggc atgagcacct ggccgccttg cgcgccatct
      841 acggttacaa gatgttcacc gggcggggcg cccgggacct gaaggcctgg cttgaaggcg
      901 cggccgaaac tgcccggtcg aacgaggatc tggcacggcg cttcgtcgag cagtgccggg
      961 cggctcagac catcctgccc ggaatcacgg tcatcgagcg gctttgcgcg gatgcgcttg
     1021 tcgcggctga acggcgggtc gatgccaggg tcgccggtca gttggacgat gacatgcgaa
     1081 cgcggctcga tgcccttctg accgaagatg cgggtggctc ggtcacgcgc ttcgtctggt
     1141 tgcgtcagtt tgagatcggg cggaactcgg ctgatatgaa ccgcctgctc gatcggctcg
     1201 agttcctgca ggctttggcg ctggaccggg gcattctggc gaatgtacag ccacaccgcg
     1261 ttgcccgcct tcgccggcag ggagagcgat acttcgcggg cgatctgcgg gatatctcgg
     1321 gtgaccgccg tctcgccatc cttgcggttt gtgctctgga atggcgcggc gccattgctg
     1381 acgccgtggt cgagacccat gaccggatcg tcggcaagac ctggcgcgag gcgaaatcgc
     1441 gatgtgacgc ccggatggac gatgccaaat tggcgctgaa ggacaccctg cagtccttca
     1501 agacattggg agcggcactc ctggaagcgc atgaggatcg ggcctccctc gaagaggccg
     1561 tcggcaatgc cggtggctgg atatccctca aagggcttgt cgccacggcc gagcaactga
     1621 ccgacacgtt tgccgccgat ccgctggtgc atgtcgttca cggatatcat cgcttccggc
     1681 gttacgcacc gcgcatgctg cgagcattag caggctgctg aaaaaggccg gtctcgacgc
     1741 ggttttgaga acatgattca cttccggcac ggcagcggtg gtgagggtga cgatgcgtgg
     1801 gacggacgaa gcgagcgagt cgctgttcag ctatgttgac cttgaggagc ggatccctgc
     1861 gggtcatccg cttcacaaga tccggcagat cgtgaacgat gcactgacga gcctcgatgc
     1921 cgagtttgac gcgctctata ccgactttgg ccgcccctcc attgcgccag agcgcctgat
     1981 ccgggcgagc cttctccaga tcctgttctc gatccgctcg gaacggcagt tgatggagca
     2041 gatggactat aacctgctgt tccgatggtt cgtcgggctg ggaatcgacg acccggtctg
     2101 ggttcccacg gtgttcagca agaaccgcga ccggctgctg acaaccgaca tgtcgcgcaa
     2161 ggtaatggcc gcgatcctcg cgcaccctca ggtcaagccg ctgctgtcgg acgagcactt
     2221 ctcggtcgac ggcaccttgg tcaaggcgtg ggcgtccatg aagagtttcc agccgaagga
     2281 aggtacagcg ccgccgcaga atgatgatcc cagtgggccg ccatcaccac cagccgacga
     2341 gacctccccg gacaccgacc aggcccagca aaccgagacc cagccgatga ccgacacgcc
     2401 ctgttgattt ccacccagaa gtgagccgga taggcgggta atttccactg agaattgagc
     2461 catgtgaacc tttccccaaa gcgatgagcg gcgggggtaa cgggagtgat ccacatggga
     2521 cttttgaaca taatccgacg catgcacttg cggcagaatc tgtcggtccg cgagatcgca
     2581 cggcgcactg gcctgtcgcg caacacgatc accaagcact tggcggctga cacgatcgag
     2641 ccgaagtttg cgacgccgga tcggccaagc aagcttgatc ctttcgccga gaagctggct
     2701 ggctggttga agacggaggc cggcaagtcg cgcaagcagc ggcggacgct gaagcagatg
     2761 catgccgatc tcgtcaaact tggcttcacc ggctcctaca accgggttgc ggcgtttgca
     2821 cggcaatggc ggacaga
//
LOCUS       DTVW01000229            1532 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1297646, whole
            genome shotgun sequence.
ACCESSION   DTVW01000229 DTVW01000000
VERSION     DTVW01000229.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1532)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1532)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1532
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1297646"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            213..686
                     /gene="smpB"
                     /locus_tag="EYO87_03095"
     CDS             213..686
                     /gene="smpB"
                     /locus_tag="EYO87_03095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011746977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SsrA-binding protein SmpB"
                     /protein_id="HIC64984.1"
                     /translation="MAKEPENKNYKVIAENRRARFDYFIESDLEAGIVLTGSEVKSLR
                     TGQSNIAESYASIEDGELWLINGHIAALSNAGVFGHEERRKRKLLVSRRELSRLWQSV
                     GREGMTLVPLVMYFNHRGLVKLKIGVAKGKKIADKRETSAKRDWNRQKQRLLKQG"
     gene            758..>1532
                     /locus_tag="EYO87_03100"
     CDS             758..>1532
                     /locus_tag="EYO87_03100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_353968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase"
                     /protein_id="HIC64985.1"
                     /translation="MQDDPKTLVSTEWLAAHLNDPDLRVIDASWHMPASGRDGRAEYE
                     AAHIPNARFFDIDAISDKRSTLPHTAPPVEMFISRMRAMGVGDGHQVVVYDNSDVRSA
                     FRVWWNFRLMGKIDVAVLDGGFGKWQAEGRPVEDMAPILRDRHITVQRQAGLIRDVTQ
                     VAAASKLADHQIIDARAPERFRGEVDEPRPGLRAGHIPGSRNLPFARLFNADGTMKNE
                     AAIRAEFETAGVDLSQPAITTCGSGVTAAILSLALERIGH"
BASE COUNT          299 a          505 c          502 g          226 t
ORIGIN      
        1 caagggccgc caggaagctt tcgccgggaa ccgaaaagac ccgctcgacc cgattggcct
       61 tcagcgcctg aaccagtatc gtcccgccat gccgcatcgc cgttcctcca tccgccatca
      121 cgccctagcg cgaagacgcg gccaaaggca atcggccagg aagtccgcgg cgatctttac
      181 agccgcgcgc gccgcgccta tctagcgcgg tcatggccaa ggaacccgag aacaaaaatt
      241 acaaggtgat cgccgagaac cggcgggcgc gtttcgatta cttcatcgaa agcgatctgg
      301 aggcgggcat cgtgctgacc gggtccgagg tcaagtccct gcgcaccggc cagtccaata
      361 ttgccgaaag ctatgccagc atcgaggatg gcgaattgtg gctgatcaac ggccatatcg
      421 cggcgctgtc caatgccggc gtcttcggcc acgaggagcg ccgcaagcga aagctgctgg
      481 tcagccggcg cgaattgtcg cggctgtggc agtccgtggg gcgcgagggg atgaccctgg
      541 tgccgctggt gatgtatttc aaccatcgcg gcctggtgaa gctgaagatc ggcgtcgcca
      601 agggcaagaa gatcgccgac aagcgcgaaa ccagcgccaa acgcgactgg aaccggcaga
      661 aacagcggct tctgaagcag ggctagaaga aagccacgtt gcagccagcg gcttcggcct
      721 gtaaatcgga ccgcgtgcct tgatgcgggg gaagaggatg caggacgatc cgaagacgct
      781 ggtctcgacc gaatggctgg ccgcgcatct gaacgacccc gacctgcggg tgatcgacgc
      841 aagctggcac atgcccgcca gcggccgcga cggacgggcc gaatacgagg ccgcccatat
      901 ccccaatgcg cggttcttcg acatcgacgc gatctcggac aagcgcagca cattgcccca
      961 caccgccccc ccggtcgaga tgttcatcag ccggatgcgc gcgatgggcg tgggcgacgg
     1021 ccatcaggtg gtggtctacg acaattccga tgtgcgcagc gcctttcgcg tctggtggaa
     1081 tttccgcctg atgggcaaga tcgacgtggc ggtgctggat ggcggcttcg gcaagtggca
     1141 ggccgagggc cgcccggtcg aggacatggc cccgatcctg cgcgaccgcc acatcaccgt
     1201 gcagcgccag gccggtctga tccgcgacgt gacgcaggtg gcggcggcca gcaagctggc
     1261 cgatcaccag atcatcgacg cccgcgcgcc cgagcggttt cgcggcgagg tggacgagcc
     1321 gcgccccggc ctgcgcgcgg gccacatccc cggctcgcgc aatctgcctt tcgcacgcct
     1381 gttcaatgcc gacggcacga tgaagaacga ggccgcgatc cgggccgaat tcgaaaccgc
     1441 cggggtcgat ctgtcgcaac ccgccatcac cacctgcggc agcggcgtga ccgccgcgat
     1501 cctcagcctg gcgctggaac ggatcggcca cc
//
LOCUS       DTVW01000230            1446 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1298001, whole
            genome shotgun sequence.
ACCESSION   DTVW01000230 DTVW01000000
VERSION     DTVW01000230.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1446)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1446)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1446
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1298001"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            204..719
                     /locus_tag="EYO87_03105"
     CDS             204..719
                     /locus_tag="EYO87_03105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009157586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CAP domain-containing protein"
                     /protein_id="HIC64986.1"
                     /translation="MTKFTLLALGALVALSACAPITSPSQPGPDGQPVPAASMIDARE
                     AQAIPARVLQQINTLRGNIAAPAMRMNPQLTAAALAHSRDMAAQNRAWHWGSDGSSPL
                     ERVRRQGYSGQLVGENISESYENDIQTLNAWMQTRDTRDVIMDPTATSLGFAWYQEPS
                     GKIWWTLISGT"
     gene            complement(757..1272)
                     /locus_tag="EYO87_03110"
     CDS             complement(757..1272)
                     /locus_tag="EYO87_03110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010393556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64987.1"
                     /translation="MYRANRRVMALSLLAFLGACGSKNTKFKTYSGPPVTQVVINKGQ
                     RRLYLLNNQTVLKSYDIGLGNEPVGDKQFEGDGKTPEGTYFIDRFNPRSRYYLSVGMS
                     YPNAEDNAYAEKMGRKPGGDIFIHGWGPEGRVLAPKKRDWTAGCIAVKDNEIEDIYAM
                     LRPGTPIVINP"
BASE COUNT          265 a          468 c          450 g          263 t
ORIGIN      
        1 ctggcttgtg gcctggcttg cggcctggcc cggcccccgc agggatgcgg gacgggccgc
       61 gccggtcgga cgattcgcgc cgaacggacc gccgtcaatc ggcatcgaag ccacagcgcc
      121 ccggtttcac gcaaacttgc gtttgtggcg cttcgccgcc ttcgctacac ctgcgcagga
      181 aaccgtcagg aaggatggcg acgatgacca aattcacgct gctggccttg ggcgcactgg
      241 ttgcgctttc ggcctgcgcg ccgatcacca gcccgtcgca accgggaccg gacggtcagc
      301 ctgtgcccgc agcctcgatg atcgacgccc gcgaggcgca ggcaattccg gcccgcgtct
      361 tgcagcagat aaacaccctg cgcggcaata tcgccgcgcc cgcgatgcgg atgaacccgc
      421 aactgaccgc ggcggcgctg gcccattcgc gcgacatggc ggcgcagaac cgcgcctggc
      481 actggggctc ggacggctcg tcgccgctgg agcgggtcag gcggcagggc tattccggcc
      541 agctggtggg cgagaacatt tccgaaagct atgaaaacga catccagacg ctgaacgcct
      601 ggatgcagac gcgcgacacg cgcgacgtga tcatggatcc gaccgcgacc agcctgggat
      661 tcgcctggta tcaggaaccc tcgggcaaga tctggtggac gctgatcagc ggcacctgag
      721 ggcgccgcga cagcaggcag gtcaggcggc tatcggtcag ggattgataa cgatcggcgt
      781 gccgggacgc agcatcgcat agatatcctc gatctcgttg tccttcacgg cgatgcagcc
      841 ggcagtccag tcgcgcttct tgggcgccag gaccctgcct tcgggccccc atccgtggat
      901 gaagatgtcg ccacccggct tgcggcccat cttttccgca taggcgttat cctcggcatt
      961 gggataggac atgccgacgg acagataata ccggctgcgc ggattgaaac ggtcgatgaa
     1021 atatgtcccc tcgggcgtct tgccgtcgcc ctcgaactgc ttgtcgccga caggctcgtt
     1081 gcccagcccg atgtcatagg atttcagcac ggtctggttg ttcaaaagat acaaccgccg
     1141 ctgccccttg tttatgacga cctgagtcac cggagggccg ctataggtct tgaatttcgt
     1201 gttcttgctg ccgcaggccc ccagaaaggc cagcagcgac agcgccatca cgcgccggtt
     1261 tgctcgatac atcactgcct ctgcatttta tcgtttttat ggccctgaca tagcatgaag
     1321 accgggtcct tgcctagcgc ctgacgaatt cggccgcggt ttcgatatgg ggcgaccagc
     1381 ggaactgatc gacgatcaga agccgggtca aactgaaacc gccatcggcc agaatccgcg
     1441 catcgc
//
LOCUS       DTVW01000231            1853 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1298719, whole
            genome shotgun sequence.
ACCESSION   DTVW01000231 DTVW01000000
VERSION     DTVW01000231.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1853)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1853)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1853
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1298719"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            47..958
                     /locus_tag="EYO87_03115"
     CDS             47..958
                     /locus_tag="EYO87_03115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017929638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydro-3-deoxygalactonokinase"
                     /protein_id="HIC64988.1"
                     /translation="MPMPDWIAADWGTTHLRVWTMDGQGRVLDRIRSDSGMGQIGPDD
                     YESTLLGLIGSSLPAASRVPVICCGMAGARQGWVEAPYRAVPCPPGTIADAARPSPGD
                     PRLRVFILPGLSQAGPADVMRGEETQIAGYLAAHPGFDGVLCLPGTHSKWVHVSAGEV
                     VSFRSFMTGEIFALLSRHSVLRHSVGSAGHDSGAFADAVAHAMSRPAAIASDLFSLRA
                     QSLLTGLAPVVARSRLSGLLIGIELAAARPYWLGQDVAIVASDSPGDAYAEALLAQGA
                     APHRADAEEMTLNGLRAAWTALRATGG"
     gene            1068..>1853
                     /locus_tag="EYO87_03120"
     CDS             1068..>1853
                     /locus_tag="EYO87_03120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008331983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HIC64989.1"
                     /translation="MGETGSGNDLRCDVAVIGAGTAGISAERAARKAGAKTLLIDPYF
                     AGTVCASVGCMPSKLLIAAAHAAHDLRRAEVFGIEVPPARIDGGKVMQRVRDLRDDFV
                     AGVKRGFDRLPPGTCIRASARFDGPKSLRLDDGRRIEAGAIVITTGAFPLVPGPFTGL
                     GDRLLTNRTVFDLPDLPDRLAVIGAGPIGLELAQAFGRLGVSVTLFDQGRRLGRIRCD
                     RVHRVLRDSLSRDVDLKLGCKVIPEARDEAIHLRWSGDHDGEAD"
BASE COUNT          253 a          626 c          667 g          307 t
ORIGIN      
        1 gggcgaaatc gccatgctgc gcgcgcttgc cgagacggag acgatgatgc ccatgcctga
       61 ctggatcgcc gcagattggg gaaccacgca tctgcgggtc tggaccatgg acggccaggg
      121 ccgggtgctg gatcgtatcc gcagcgacag cggcatgggc cagatcgggc cggacgacta
      181 cgaatccaca ttgctgggcc tgatcggatc gtcgctgccg gccgcaagcc gggtcccggt
      241 catctgctgc ggcatggccg gtgcccggca aggctgggtc gaggcgccct atcgcgcggt
      301 tccctgcccg cccggcacca tcgccgacgc ggcgcgaccc tcgcccggcg atccgcgcct
      361 gcgggtattc atcctgcccg gcctgtccca ggccggccct gccgacgtga tgcgcgggga
      421 agaaacccag atcgcgggct atcttgccgc ccaccccggt ttcgacggcg tgttgtgcct
      481 gcccggcacg catagcaaat gggttcatgt cagcgccggc gaggtcgtca gctttcgcag
      541 cttcatgacc ggcgaaatct tcgcgctgct gtcgcgacat tcggtgctgc gccattccgt
      601 cggctccgcc ggccacgatt cgggcgcctt cgcggatgcg gtcgcccatg ccatgtcgcg
      661 gccggcggcg attgcctcgg acctgttctc gctgcgggcg caatccctgc tgacggggct
      721 ggcgccggtt gtcgcgcgat cacgtctgtc cggtctgctg atcgggatcg aacttgccgc
      781 cgcccggccc tattggctgg gtcaggacgt ggcgatcgtc gcatcggatt cgccgggcga
      841 tgcgtatgcc gaggcgctgc ttgcgcaggg cgcggccccg caccgggcgg atgccgaaga
      901 gatgacgctg aacggtctcc gcgccgcctg gactgcgctg cgcgcgaccg gcggctaagc
      961 cgcctcgccg cgatcccgct ccggccgggc ctgcaagccc accgacgctg cgaggaaccc
     1021 cgacgcgccg ggcttgttct gtctgggtgg acaggaaagg aacggggatg ggcgagacag
     1081 gcagcggcaa cgatctgcga tgcgacgtgg ccgtgatcgg cgcgggcacg gccggcattt
     1141 cggccgaacg cgcggcccgg aaggcggggg cgaaaaccct gctgatcgac ccctatttcg
     1201 cgggcacggt ctgcgccagt gtcggctgca tgccatcgaa gctgctgatc gccgcagccc
     1261 atgccgccca tgacctgcgt cgcgccgagg tcttcgggat cgaggttccg cccgcgcgga
     1321 tcgatggcgg taaggtgatg cagcgggtcc gcgacctgcg cgacgatttc gtcgccgggg
     1381 tgaaacgcgg ttttgaccgg ctgccgcccg gaacctgcat ccgcgccagc gcgcggttcg
     1441 acggtccgaa aagcttgcga ctggacgacg gccgacggat cgaggcgggc gcgatcgtca
     1501 tcaccacggg ggcctttccg ctggtgccgg ggccattcac gggtctcggc gatcggctgc
     1561 tgaccaatcg caccgtgttc gacctgcccg acctgccgga caggctggct gtgatcggcg
     1621 cgggtccgat cgggctggaa ctggctcagg ccttcggccg gctgggcgtt tccgtcacgt
     1681 tgttcgatca gggccgccgc ctgggccgga tccgctgcga ccgggtgcat cgggtgctgc
     1741 gcgactcgct gtcgcgcgac gtggacctga agctgggctg caaggtcatc cccgaggcgc
     1801 gcgacgaggc gatccatctg cgctggagcg gcgatcacga tggcgaggct gat
//
LOCUS       DTVW01000232            1274 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1299790, whole
            genome shotgun sequence.
ACCESSION   DTVW01000232 DTVW01000000
VERSION     DTVW01000232.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1274)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1274)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1274
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1299790"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1076)
                     /locus_tag="EYO87_03125"
     CDS             complement(<1..1076)
                     /locus_tag="EYO87_03125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008027463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-basal body complex protein"
                     /protein_id="HIC64990.1"
                     /translation="MSMSSAMNAGVAGLSANSTRLATISDNIANSGTYGYKRMETDFN
                     AFVLQQNRTAGLYSAGGVRASTQRIIDEDGALVTTSHPLDIAISGRGMLPVTSAVDMD
                     NGFDELPFMMTRTGSFRTDSEGVLRTESGLVLMGWPAQADGTVPLMSRDTMQGLQPVQ
                     ISANQTSGDPTTRVSLGVNLPATETEPTAPGDPMSLKVEYFGNLGTSESLDFTFTPDT
                     TDPTGMSNIWTVEVRDSALDPTANVVGSYRIEFDDSMSDGGSIRSVTTLSGGAYDAAT
                     GNLGLTVAGGPMDVFIGTPGGTTGLRQLSASFSPTNITKNGSPVGQLTTVEVDQDGYL
                     KATYDTGFVRTLYQVPVVDVPNPNG"
     gene            complement(1164..>1274)
                     /locus_tag="EYO87_03130"
     CDS             complement(1164..>1274)
                     /locus_tag="EYO87_03130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein MotB"
                     /protein_id="HIC64991.1"
                     /translation="LDPQRIQRVTGYADRKNRSANPMDPVNNRIELILLR"
BASE COUNT          242 a          388 c          393 g          251 t
ORIGIN      
        1 ccattggggt tgggaacatc gaccacgggc acctgataga gagtgcggac gaagccggta
       61 tcataggtcg ccttgagata accgtcctga tcgacctcga cagtcgtcaa ttgtccgacc
      121 ggagatccgt tcttcgtgat attggtcggt gagaagctgg ccgagagctg gcgcaagccg
      181 gtcgtgccgc cgggcgtccc gatgaacacg tccatcggac cacctgccac cgtcagtccc
      241 agattgccgg tggccgcgtc gtaggcgccg ccactcagcg tggtgacact gcgaatgctg
      301 ccgccatccg acatgctgtc gtcgaattcg atccggtagc tgcccaccac gttcgccgtc
      361 ggatcgaggg cggaatcgcg gacctcgacg gtccagatat tcgacatgcc ggtcggatcg
      421 gtcgtgtccg gggtaaaggt gaaatcgagt gattccgagg ttcccagatt gccgaaatat
      481 tcgaccttca ggctcatcgg atcacccggt gcggtcggct cggtctcggt cgccggcaga
      541 ttgacaccaa ggctgacgcg cgtcgtcggg tcgcccgacg tctggttggc cgagatctgc
      601 accggctgca gaccctgcat cgtgtcgcgc gacatcagcg gcacggtacc atccgcctgc
      661 gccggccagc ccatcaggac aaggccggat tcggtcctca acacgccctc cgaatcggtt
      721 cggaacgagc ctgtccgggt catcatgaag ggcagttcgt caaagccgtt gtccatgtcg
      781 accgccgagg tcacgggcaa cattccgcgc ccgctgatgg cgatatcaag aggatgggac
      841 gtggtgacga gcgcgccgtc ttcatcgatg atccgctgcg tgctggcccg aacaccgccc
      901 gccgagtaaa gcccggccgt gcggttctgc tgcaggacga aagcattgaa gtccgtttcc
      961 atccgcttgt agccgtaggt tccggaattg gcgatattgt ccgaaatggt cgccagacgg
     1021 gtcgaattcg ccgacagacc ggcaacgccg gcattcatcg cggatgacat ggacatgaag
     1081 tgacctttcg tcgagtacag gtttgacagg caccttgcgg cacgggcctt aagattcgcc
     1141 taatcgcggc aggccaaaat cgtctatctc agtaaaatca gctcgatccg gttgttgacc
     1201 gggtccatcg gattggccga gcggttcttg cgatcggcat atcccgtcac acgctggatc
     1261 cgctgcggat ccag
//
LOCUS       DTVW01000233            1082 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1300142, whole
            genome shotgun sequence.
ACCESSION   DTVW01000233 DTVW01000000
VERSION     DTVW01000233.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1082)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1082)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1082
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1300142"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(26..340)
                     /locus_tag="EYO87_03135"
     CDS             complement(26..340)
                     /locus_tag="EYO87_03135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_004139947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ArsR family transcriptional regulator"
                     /protein_id="HIC64992.1"
                     /translation="MDDDKVFKALADPGRRRLLDRLCEQNGQTLGQLCDRMEMTRQSV
                     TQHLGILEDANLISTVRRGREKLHFINPVPLYEVYGRWIRKFEEGRLGLLSDLRQQLE
                     QE"
     gene            complement(461..>1082)
                     /locus_tag="EYO87_03140"
     CDS             complement(461..>1082)
                     /locus_tag="EYO87_03140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019953599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="LamB/YcsF family protein"
                     /protein_id="HIC64993.1"
                     /translation="MARVMRQAQGKGVGIGAHPGFHDLQGFGRRRLRLSAEELGNMVA
                     YQLGAAQGVARSQGAQVRHLKLHGALANMASEDPEIARACYRAALAVDPEIVLVVLAG
                     TPMQQVARDLGAAWAGEIFADRAYNEDATLVDRSQPGAVLHDAAQVGARIETMLRAGA
                     IITASGKQIPCRIDTICVHGDSPGAVAMARALRDHLGAAGIEVARF"
BASE COUNT          175 a          402 c          323 g          182 t
ORIGIN      
        1 agctggctga catgtcggtc atcgctcact cctgttccaa ttgctgtctg aggtcggaca
       61 gaagacccag acggccctcc tcgaactttc ggatccagcg cccatagacc tcgtagagcg
      121 ggaccggatt gatgaagtgc agtttctcgc gcccccgcct gacggtgctg atgaggttcg
      181 cgtcttccag aatccccaga tgctgggtca ccgactggcg cgtcatctcc atccggtcgc
      241 aaagctggcc cagcgtctgg ccgttctgct cgcacagccg atccagcagg cgcctgcggc
      301 cgggatcggc cagcgccttg aagaccttgt cgtcatccat tctcgattcc gcctcgggac
      361 aggaactaat atgcaggtaa aaacctgctt gtcaagacgt gcaggcaaaa aactgcatgt
      421 cttgcgcagc ggcgcatttc cggcggcgcc ccggccccgg tcagaaccgc gcgacctcga
      481 tcccggccgc gcccagatga tcgcgcagcg cccgtgccat cgccaccgcg ccggggctgt
      541 cgccatgcac gcagatcgtg tcgatccggc acgggatctg cttgcccgat gcggtgatga
      601 tcgcgcccgc ccgcagcatc gtctcgatcc gcgcgccgac ctgcgccgca tcatgcagga
      661 ccgcgccggg ctggctgcga tcgaccagcg tcgcatcctc gttataggca cggtcggcaa
      721 agatctctcc ggcccaggcg gcgcccagat cccgggccac ctgctgcatt ggcgtcccgg
      781 ccagcaccac cagcacgatt tccggatcga ccgccagcgc cgcacgatag caggcgcgcg
      841 cgatctcggg gtcttcgctg gccatgttgg ccagggcgcc gtgcagcttc aggtgtcgca
      901 cctgcgcgcc ctgcgaccgc gccacgccct gcgccgcgcc cagctgatag gcaaccatgt
      961 tgccaagttc ctcggccgac aggcgcagcc gccgccgccc gaagccctgc agatcgtgaa
     1021 agcccggatg cgccccgatg ccgacgccct tgccctgcgc ctgccgcatc acgcgcgcca
     1081 tc
//
LOCUS       DTVW01000234            1350 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1300232, whole
            genome shotgun sequence.
ACCESSION   DTVW01000234 DTVW01000000
VERSION     DTVW01000234.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1350)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1350)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1350
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1300232"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1061
                     /locus_tag="EYO87_03145"
     CDS             <1..1061
                     /locus_tag="EYO87_03145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019956294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HIC64994.1"
                     /translation="RERAKELRRAIDEGQDPLAARDEWRGAPRITDMINRYIAEHLPK
                     LAKTNAGDQVSMLKKMVEPAWGNRLVTEITKSDVAKFLDFVAEGRPRPCKAKPNNRAR
                     KLQGHKPTPIRANRMGEVLRKMFTLAVEWEWRTDNPAQGFHRRIEHARERFLSPEELT
                     RLAVVLDTAEDQRAAGIIRMCMLTGARVGEVRTARFEQFNLDYAIWSKPASTTKQRKI
                     HRVPISQDVAAIVRLRQQAVPNGIPWLFPGDTVGQPVREIRRFWAKAQKDAGLADVRI
                     HDLRHTFASLLVSGGASLEMIGKLLGHSQMQTTQRYAHLTDSPLRAGVDTVASLLRPR
                     PRLVHGAAQDGADLPKSA"
     gene            complement(1065..>1350)
                     /locus_tag="EYO87_03150"
     CDS             complement(1065..>1350)
                     /locus_tag="EYO87_03150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019956681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64995.1"
                     /translation="WVRETLQQFEEERDLLRRPASTIGASPRYDWDSMYAWLTVLLFE
                     KGVPDTQTALVSLVQDWFVQNSKSGEVPDESTIRKRLMSLWRKLRGEETV"
BASE COUNT          255 a          453 c          429 g          213 t
ORIGIN      
        1 cgcgcgaacg cgccaaggaa ctgcgccgcg ccatcgacga ggggcaggat cctctggcgg
       61 cgcgcgacga gtggcgcgga gccccgcgca tcaccgacat gatcaaccgc tacatcgccg
      121 agcatctgcc gaaactggcc aagaccaatg cgggcgacca ggtctcgatg ctgaagaaga
      181 tggtcgaacc cgcctggggc aaccggctgg tgacggagat caccaagtcc gacgtcgcga
      241 agttcctcga tttcgtggcc gaggggcgac cacgtccctg caaggcaaag cccaacaacc
      301 gggcccgcaa gctgcagggt cacaagccca ccccgatccg ggccaaccgg atgggcgagg
      361 tgctgcgcaa gatgttcacg ctggcggtgg agtgggaatg gcggacggac aaccccgcgc
      421 aggggttcca tcgtcgcatc gaacacgccc gcgaacgctt cctgtcgccc gaggagctga
      481 cccggctggc ggtcgttctg gatacagctg aggatcagcg cgccgcggga atcatccgca
      541 tgtgcatgct gaccggcgcc cgggtgggcg aggtgcgcac ggcgcggttc gaacagttca
      601 acctcgacta tgccatctgg tcgaaaccag cctcgaccac caagcagcgc aagatccatc
      661 gcgtcccgat ttcgcaggac gttgcggcca tcgtgcggct gcgccaacag gcggtgccga
      721 acggcattcc atggctgttc cccggcgaca cggttggtca acctgtgcgg gaaatccgcc
      781 gcttctgggc caaggctcag aaggatgccg ggctggccga cgtccgcatc catgatctgc
      841 gccacacctt cgcctcgctg ctggtcagcg gcggcgcatc actggaaatg atcggcaagc
      901 tcttgggcca cagtcagatg cagaccaccc agcgctatgc gcacttgacg gattcccccc
      961 tgcgcgcagg cgtcgacacg gtggccagcc tcctgcggcc gcggccgcgc ctcgtgcatg
     1021 gcgcggcgca ggacggggcc gacctgccga aatcggcctg accctcacac ggtctcctcg
     1081 ccgcgcaact tgcgccagag ggacatcagt ctcttgcgga tggtgctttc atccggcact
     1141 tcgcccgact tcgaattctg gacgaaccag tcttgaacca gcgaaaccag cgcggtctgg
     1201 gtgtcgggca cgcctttctc gaacaggaga acggtcagcc atgcatacat ggaatcccaa
     1261 tcgtaacgag gactggcgcc gatggtggac gccggtcgtc gcagcagatc gcgttcttcc
     1321 tcgaactgct gcagtgtttc cctgacccag
//
LOCUS       DTVW01000235            1615 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1302767, whole
            genome shotgun sequence.
ACCESSION   DTVW01000235 DTVW01000000
VERSION     DTVW01000235.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1615)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1615)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1615
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1302767"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            149..1153
                     /gene="dprA"
                     /locus_tag="EYO87_03155"
     CDS             149..1153
                     /gene="dprA"
                     /locus_tag="EYO87_03155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007426410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-protecting protein DprA"
                     /protein_id="HIC64996.1"
                     /translation="MTDYEACPEGVAAAELNAGRKAGARLIRCDSPLYPAQLRQIDGA
                     PPILWVRGDPAWLSRNPVAVIGARNASSLGLRMARGMAAGLGEAGHTVVAGLARGIDT
                     AAHNAALGSGTVAVMAGGVDVIYPAENVVLAAQIAEQGVLVSEQAPGTEPAARHFPTR
                     NRIVSGLSRAVVVIEAAHRSGTLITARNALDQGREVMAVPGHPMDARAAGCNALIRDG
                     ALLVRNSADVAAALMSRPGEAPARSTELSANAGPIPAPRSAAGDAQRSATPSRIADQG
                     GPVNLESRILSRLTPSPTEENDLIRDLGVPAAAACAAILSLELQGRLTRLAGGRLALS
                     "
     gene            1336..>1615
                     /locus_tag="EYO87_03160"
     CDS             1336..>1615
                     /locus_tag="EYO87_03160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008036521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase I"
                     /protein_id="HIC64997.1"
                     /translation="MPVVVVESPAKAKTIEKYLGGDYRVLASFGHVRDLPPKDGSVDP
                     DSEFAMKWEIASDSKKHLKAIRDALKDDQTLILATDPDREGEAISWHLL"
BASE COUNT          262 a          577 c          544 g          232 t
ORIGIN      
        1 attcccacac tgtccacagt gtcggcggtc cgtgtcgctg tcgaggcact cgccaccaca
       61 gctgctggcc tcgccgtcac acacgcaaaa tcttagctcc gcgatccgca aatccccacc
      121 gccgccggaa atcgcggccg aggccgggat gacggattac gaagcctgtc ccgaaggcgt
      181 ggccgcggcc gaactgaatg ccgggcgcaa ggccggggcg cggctgatcc gctgcgattc
      241 cccgctgtat cccgcccagt tgcgccagat cgacggcgca ccgccaatcc tgtgggtgcg
      301 cggcgatccg gcatggctgt cgcgcaatcc ggtcgctgtg atcggggcgc gcaacgcctc
      361 gtcgctgggc ctgcgcatgg cgcgcgggat ggcggcaggt ctgggcgagg ccgggcatac
      421 ggtcgtcgcg ggccttgccc gtggcatcga caccgcagcc cacaacgccg ccctgggcag
      481 tggcaccgtg gcggtgatgg cgggcggcgt cgatgtcatc tacccggctg agaacgtcgt
      541 cctggcagcc cagatcgccg aacagggtgt gctggtttcg gaacaggcgc cggggaccga
      601 acccgccgcc cggcatttcc cgacgcggaa ccgaatcgtg tcgggcctgt cgcgcgcggt
      661 cgtggtgatc gaggccgcgc atcggtcggg cacgctgatc accgcaagga acgcgctgga
      721 tcagggccgc gaggtcatgg cggtgccggg ccacccgatg gatgcccgcg ctgcgggctg
      781 caatgcactg atccgcgacg gagccttgct ggtgcgcaat tccgccgatg tggcggcggc
      841 gctgatgtcg cggcccggcg aagccccggc gcgatcgacc gaattgtccg caaacgccgg
      901 cccgatcccg gcgccccggt ctgccgccgg cgatgcccag cgatcggcca cgccgtcgcg
      961 gatcgcggat cagggcgggc cggtcaacct cgaatcgcga atcctgtcgc gcctgacgcc
     1021 cagcccgacc gaggaaaacg acctgatccg cgatctgggc gtccccgccg ccgcagcctg
     1081 cgcggcgatc ctgtcgctgg aactgcaggg acgtctgacg cggctggcgg gcggcagact
     1141 ggcgctgagc tgatcatcgc cccgcgcgac atccccctgg cacgtcgtcc gccgcgttct
     1201 ggaccaagcg gcgaatgcgg ccggccatcc cccttcgtcc aggcccctgg gagaagccgc
     1261 tgacgcgacg ggcgttgaca ccgcctcggc acacaaccat gttgccgccc cattgcagac
     1321 acccccgagg tcagaatgcc cgttgtcgtc gtcgaatccc cggccaaggc caagaccatc
     1381 gagaaatacc tcggcggcga ctatcgcgtg ctggccagct ttggccacgt ccgcgacctg
     1441 ccgcccaagg acggcagcgt cgatcccgac agtgaattcg cgatgaagtg ggaaatcgcc
     1501 agcgacagca agaagcacct caaggcgatc cgcgacgcgc tgaaggacga ccagactctc
     1561 atccttgcta ccgaccccga ccgcgaaggc gaggcgatca gttggcacct gctgg
//
LOCUS       DTVW01000236            1471 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1303116, whole
            genome shotgun sequence.
ACCESSION   DTVW01000236 DTVW01000000
VERSION     DTVW01000236.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1471)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1471)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1471
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1303116"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1418)
                     /gene="sucA"
                     /locus_tag="EYO87_03165"
     CDS             complement(<1..1418)
                     /gene="sucA"
                     /locus_tag="EYO87_03165"
                     /EC_number="1.2.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011046105.1"
                     /note="SucA; E1 component of the oxoglutarate
                     dehydrogenase complex which catalyzes the formation of
                     succinyl-CoA from 2-oxoglutarate; SucA catalyzes the
                     reaction of 2-oxoglutarate with dihydrolipoamide
                     succinyltransferase-lipoate to form dihydrolipoamide
                     succinyltransferase-succinyldihydrolipoate and carbon
                     dioxide; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase E1 component"
                     /protein_id="HIC64998.1"
                     /translation="MRQEYRGYDSSFLQGHNAAWVEQLYGQWARDPAAVDQAWDEFFR
                     GLGDAQEDALREAEGPSWSRADWPPMPHDDTTAALTGEWPMSGKAEADEAMRKIAGKA
                     AEKGVELTTDQMRQAVLDSIRALMLIRAYRIRGHLHADLDPLKLRHVPDHGELKPATY
                     GFGPGDLDRPIFIDNVLGLEVATMRQICELMKRTYCGTFALQYMHISNPEEAAWLKER
                     IEGYGKEIAFTRNGRRAILNKLVEAEGFEKFLHVKYMGTKRFGLDGGEALIPAMEQIV
                     KRGGALGVKEIVIGMPHRGRLSVLANVMSKPYRAIFHEFQGGSFKPEDVDGSGDVKYH
                     LGASSDREFDGNIVHLSLTANPSHLEAVNPVVLGKARAKQDQLGDRKARTAVLPVLLH
                     GDAAFAGQGVVAECLQLSGIRGHRTGGTIHIVVNNQIGFTTAPHFSRTSPYPTDIALM
                     VEAPIFHVNGDDPEAVVHAARVA"
BASE COUNT          237 a          471 c          480 g          283 t
ORIGIN      
        1 gcgaccctgg ccgcgtggac gacggcctcg ggatcatcgc cgttgacgtg gaagatcggc
       61 gcctcgacca tcagcgcgat atcggtcgga tagggcgagg tgcggctgaa atgcggcgcg
      121 gtggtaaagc cgatctggtt gttcacgacg atatggatcg tgccgccggt gcggtggccg
      181 cggatgcccg aaagctgcag gcattccgcc accacgccct ggccggcgaa ggccgcgtcg
      241 ccgtgcagca ggaccggcag caccgcggtg cgggccttgc ggtcgcccag ctggtcctgc
      301 ttggcgcgcg ccttgcccag cacgaccggg ttcaccgcct ccagatgcga ggggttggcg
      361 gtcagcgaca ggtggacgat gttgccgtcg aattcgcggt cggaggaggc gccgagatgg
      421 tatttcacgt cgcccgatcc gtccacgtcc tcgggcttga agctgccgcc ctggaattcg
      481 tggaagatgg cgcggtaggg ttttgacatc acgttggcca gcaccgacag tcggccgcga
      541 tgcggcatcc cgatgacgat ttccttcacg ccaagcgcgc cgccgcgctt gacgatctgt
      601 tccatcgccg ggatcagcgc ctcgccgcca tcgaggccga agcgcttggt gcccatgtat
      661 ttgacatgca ggaacttctc gaatccctcg gcctcgacca gcttgttcag gatcgcccgg
      721 cggccgttgc gggtgaaggc gatttccttg ccatagccct cgatccgttc cttcagccag
      781 gcggcttcct cggggttcga gatatgcatg tattgcagcg cgaaggtgcc gcaataggtg
      841 cgcttcatca attcgcagat ctggcgcatg gtggcgactt ccagacccag cacgttgtcg
      901 atgaagatcg gccggtccag atcgccggga ccgaagccat aggtggcggg cttcaattcg
      961 ccatgatcgg ggacatggcg cagcttcagc gggtcgagat cggcgtgaag atgaccgcgg
     1021 atccggtagg cgcggatcag catcagcgcg cggatgctgt ccagcaccgc ctgccgcatc
     1081 tggtcggtgg tcagttcgac ccccttttcg gcggcctttc cggcgatctt cctcatcgcc
     1141 tcgtcggcct cggccttgcc ggacatcggc cattcgccgg tcagcgcggc ggtggtgtcg
     1201 tcatgcggca tcggcggcca gtcggcgcgc gaccaggacg ggccctcggc ctcgcgcagc
     1261 gcgtcttcct gggcatcgcc gaggccgcgg aagaattcgt cccaggcctg atcgaccgcg
     1321 gccggatccc tggcccactg gccatagagc tgttcgaccc aggcggcgtt atggccttgc
     1381 aggaaggagg aatcgtaccc cctatactcc tgcctcaata agccattaat taacttatca
     1441 gctacctgtt cttctgaagc tactccaaca a
//
LOCUS       DTVW01000237            1491 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1305767, whole
            genome shotgun sequence.
ACCESSION   DTVW01000237 DTVW01000000
VERSION     DTVW01000237.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1491)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1491)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1491
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1305767"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            12..464
                     /locus_tag="EYO87_03170"
     CDS             12..464
                     /locus_tag="EYO87_03170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009820199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC64999.1"
                     /translation="MALRRYLLFLAAANLLWEFAHLPLYTIWLTAKPPELVFAVLHCT
                     GGDVLIALSAIVLALLLFGNSEWPRLGAGRVLLAVLAFGIGYTIFSEWLNIVVRQAWA
                     YRDLMPVIPVIDTGLSPFMQWLVVPLAAYSYATGWRPWRRKKREPVHA"
     gene            457..1185
                     /locus_tag="EYO87_03175"
     CDS             457..1185
                     /locus_tag="EYO87_03175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005613353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein CcdA"
                     /protein_id="HIC65000.1"
                     /translation="MPDLSLIGLTIVLLAGVISFASPCVLPLVPGYVSYIAGRTVGGA
                     ARPSRGQSVWLSLFFVLGFSTIFMILGASATALGQSLLRWRYELNIIGGGIVVLFGLF
                     MLGAARIQTMQRDFRFQLDLPGGQPVASYVLGLAFGFGWTPCIGPILGAILTASAASA
                     TVGQGVALLGVYSIGLGVPFLIVAAFTDGLAGRLRGARRLGRRLHQIAGVVMIVMGVA
                     MMTGQLSALSYWMLDAFPVLGRIG"
     gene            1397..>1491
                     /locus_tag="EYO87_03180"
     CDS             1397..>1491
                     /locus_tag="EYO87_03180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015943385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65001.1"
                     /translation="MRCPVCDVPLSMADRQGVEIDFCPDCRGVWL"
BASE COUNT          196 a          459 c          509 g          327 t
ORIGIN      
        1 ccgactggcg ggtggcgctg cggcgctatc ttctttttct ggccgccgcg aaccttctgt
       61 gggaattcgc gcacctgccg ctttatacca tctggctgac cgcaaagccc ccggaactgg
      121 tctttgcggt gctgcattgc accggcggcg acgtgctgat cgcgctcagc gcgatcgtgc
      181 tggcgctttt gctgtttggc aattcggaat ggccaaggct gggtgccgga cgcgttcttc
      241 ttgccgttct ggccttcggg atcggctaca ccatcttcag cgaatggctg aacatcgtgg
      301 tccggcaggc ctgggcctat cgcgacctga tgccggtcat tccggtaatc gataccggtc
      361 tcagtccgtt catgcagtgg ctggtcgtgc cgctggccgc ctattcctac gccaccggct
      421 ggcgaccatg gcgccgcaag aaaagagagc ccgtacatgc ctgacctttc cctgatcggc
      481 ctgaccatcg tgctgctggc aggcgtgatt tcctttgcct cgccctgcgt gttgccgttg
      541 gtgccgggct atgtctccta cattgccgga cgaaccgtcg gcggcgcggc gcggcccagc
      601 cgtggtcaat ccgtctggct cagtctgttt ttcgtgctgg gcttctcgac gatcttcatg
      661 atccttggcg cctcggccac ggctttgggc cagtcgcttc tgcgctggcg ctacgagttg
      721 aacatcattg gcggcggcat cgtcgtcctg ttcggattgt tcatgctggg cgcagcgcgg
      781 atccagacga tgcagcggga ttttcgcttt cagcttgatc tgccgggcgg gcagccggtg
      841 gcgtcctatg tgctcgggct tgccttcggc ttcggctgga ccccttgcat cggcccgatc
      901 ctgggcgcga tcctgaccgc cagcgccgcc agtgccacgg tcgggcaggg ggtggcgctg
      961 ctgggcgtgt attccatcgg gctgggcgtg ccgttcctga tcgtggccgc cttcacagac
     1021 ggccttgccg gccgcctgcg cggcgcccgc cggcttgggc gccgcctgca tcaaatcgcg
     1081 ggcgtggtga tgatcgtgat gggcgttgcg atgatgaccg gccagctgag cgcgctgtcc
     1141 tactggatgc tggatgcgtt tcccgtgttg ggcaggatcg gctgaggccg gggaaccggt
     1201 atcaccgcga agctccggcc tcgggacgcg tcaggaaatt tctgccgcgg cccttgaacc
     1261 tcaagctact ggagatccca tcttggggag acgaaaagcg aaggggcggc cgtgcccctg
     1321 atcggaacag gaggatcgac ggatggtggc tgacgtgaat gatgccgggc gcggcccgca
     1381 agggggcggc ggcaagatgc gctgcccggt ctgtgacgtg ccgctgagca tggccgacag
     1441 gcagggtgtc gagatcgatt tctgccccga ttgccggggc gtctggctgg a
//
LOCUS       DTVW01000238            1416 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1305943, whole
            genome shotgun sequence.
ACCESSION   DTVW01000238 DTVW01000000
VERSION     DTVW01000238.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1416)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1416)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1416
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1305943"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(143..397)
                     /locus_tag="EYO87_03185"
     CDS             complement(143..397)
                     /locus_tag="EYO87_03185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65002.1"
                     /translation="MTKPVPLMVCALLILAACGRGDTAYPRLLPTAQALAEPTLPDHA
                     AGGSAAIETATEAEGGALTRRAEALRRPVIEPDLRARMGL"
     gene            474..1061
                     /locus_tag="EYO87_03190"
     CDS             474..1061
                     /locus_tag="EYO87_03190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010394793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HIC65003.1"
                     /translation="MARTQGSRAEITGPLVRAQALRLFARHGYAAVSMRQIAAGVGVQ
                     AGALYAYTPDKQALLADLLETHMRDLLAAWQDDPAQPPLARLEGFVRFHINFSLDHPD
                     AVFLSYMELRNLTPENHGRIAALRTRYEDGLDRILHAGTASGAMQLDDPRLARMALIA
                     MLTGVTNWYREGGRLDRTRIADIYWGLARGAVGAD"
     gene            1125..>1416
                     /locus_tag="EYO87_03195"
     CDS             1125..>1416
                     /locus_tag="EYO87_03195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_353472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HIC65004.1"
                     /translation="MSLPPGFLDEIRNRVPISRVIGRRVVWDQRKSNQARGDWWAPCP
                     FHQEKSASFHCDDQKGFYYCFGCQAKGDVISFLRECDGMEFIEAVKSLASEAG"
BASE COUNT          232 a          475 c          458 g          251 t
ORIGIN      
        1 cataatcgta gaacatccgc ggcgtgcgcg cccggtgcag ccgtttcaga tcctcgatgc
       61 aggtgatgac gggcatggcc gggcctcctc agtgtggtca gaatttctta ccaccggtcg
      121 cgaacctgct caatcgcccc tgtcacaacc ccatccgggc gcgcagatcg ggctcgatga
      181 ccggccttct cagggcttcg gcacggcggg tcagggcacc gccctcggcc tcggtggcgg
      241 tctcgatggc ggctgatccg ccggccgcat gatcgggcag ggtcggctcg gccagggcct
      301 gcgccgtcgg cagcagcctt ggataggcgg tatcgccgcg cccgcaggcg gcaagaatca
      361 gcagggcgca gaccatcaga ggaaccggct tcgtcatgac gcccaggtta gggcgagggc
      421 gcctgtcccg caatcgccct tttcccgccc cggtcgctgg cctagacagg gacatggccc
      481 gtacccaagg ttcccgcgcc gagatcaccg gaccgctggt ccgcgcccag gccctgcgcc
      541 ttttcgcgcg ccacggctat gcggcggtgt cgatgcgcca gattgctgcc ggcgtcggcg
      601 tgcaggccgg cgctctctat gcctatacgc ccgacaagca ggcgctgctg gccgatcttc
      661 tggaaaccca catgcgcgat ctgctggcgg catggcagga cgatccggcg cagccgccgc
      721 tggcgcgact ggaaggattc gttcgcttcc acatcaattt cagcctcgat catccggacg
      781 ccgtcttcct gtcctatatg gaattgcgca acctgacgcc tgaaaaccat ggccgcatcg
      841 cggccctgcg cacccgatac gaggatggtc tggaccggat cctgcacgcg ggcacggcct
      901 caggggcgat gcagctggac gatccgcgac tggcacggat ggcgctgatc gcgatgctga
      961 ccggcgtgac caactggtat cgcgagggcg gccgcctgga ccggacccgg atcgccgata
     1021 tctactgggg tctggcacgc ggcgcggtcg gagcggactg aggggttctt cgttgcccaa
     1081 atacccatct tgccgccgcg ccccgccccc ccgataatcg cgccatgagt ctgcctcccg
     1141 gtttccttga cgagatccgc aaccgcgttc cgatcagtcg cgtgatcggg cgccgcgtcg
     1201 tgtgggacca gcgcaaatcc aaccaggcac ggggagactg gtgggcgccg tgccccttcc
     1261 atcaggaaaa atcggccagc tttcattgtg acgaccagaa ggggttctat tattgctttg
     1321 gctgtcaggc caagggcgac gtgatcagct tcctgcgcga atgcgatgga atggaattca
     1381 tcgaggcggt aaaatccctt gcctccgagg ccgggc
//
LOCUS       DTVW01000239            1593 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1306406, whole
            genome shotgun sequence.
ACCESSION   DTVW01000239 DTVW01000000
VERSION     DTVW01000239.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1593)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1593)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1593
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1306406"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..805
                     /locus_tag="EYO87_03200"
     CDS             <1..805
                     /locus_tag="EYO87_03200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013068775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="polysaccharide export protein"
                     /protein_id="HIC65005.1"
                     /translation="RAVNLQEIQVDSAGYIFVPYAGRVRAAGNSPEQLRQIITQRLST
                     QTPDPQVTVARVAGDGATVSVMGKVVSQGVYPIERPTRALSAMLARAGGVSIAPEIAV
                     VTVKRGNDMGKVWLTDLYSGQNDIALRPGDIILVEEDQRNFTAIGALGGQTRVPLGND
                     MISAVEAIAMVGGLNSNLADPTGVFILRDEPESVASRVLGKRVSGSQRMAYVLDLTKP
                     NGLFLARDFLIRDEDTVYVTEAPYVQWNKVLSAITGGVRQADNLSKLGN"
     gene            831..>1593
                     /locus_tag="EYO87_03205"
     CDS             831..>1593
                     /locus_tag="EYO87_03205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018000446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsular polysaccharide biosynthesis protein"
                     /protein_id="HIC65006.1"
                     /translation="MAAGGEPRRLFVFNGGFFTRPRLRRMMELAGWRIAAGLPRAGDA
                     IGIWGASPTAWRGRAIATRRGCGLITVEDAFLRSILPGRARGAVARRGPIGLLIDPCG
                     VHFDPARPSLLERLIASGVTVAHRQAAIQGIARLRSLDLSKYNFHRPRLAAPPPGYVL
                     VIDQTRGDASLLGAGRSRFLAMLETARAEHPDRPIVLRTHPETAAGLRPGHLTGADLR
                     PGDLLCDAPISPWRLVENAHSVYAISSQLGYEALLA"
BASE COUNT          241 a          548 c          537 g          267 t
ORIGIN      
        1 ccgcgctgtc aacctccagg aaattcaggt cgacagcgcg ggctacatct tcgtgcccta
       61 tgcaggccgc gtgcgggccg cgggcaacag ccccgaacaa ttgcgccaga tcatcaccca
      121 gcggctgtcg acgcagaccc ccgatccgca ggtgacggtg gcgcgcgtcg ccggcgacgg
      181 ggccacggtt tcggtcatgg gcaaggtcgt gtcccagggc gtctatccga tcgaacgtcc
      241 gacccgcgcc ctgtcggcga tgctggccag ggcgggcggt gtctccatcg cccccgaaat
      301 cgcggtcgtg accgtcaagc gcggcaacga catgggcaag gtctggctga ccgatctcta
      361 ttccggccag aacgacatcg cgctgcgtcc cggcgacatc atcctggtcg aagaggatca
      421 gcgcaacttt accgccatcg gcgccctcgg cggtcagacg cgggtgccgc tgggcaatga
      481 catgatcagc gcggtcgagg ccatcgcgat ggtcgggggc ctgaattcaa acctggccga
      541 tccgaccggc gtgttcatcc tgcgcgacga accggaatcc gtcgcaagcc gggttctggg
      601 caagcgcgtc tccggttcgc agcggatggc ctatgtgctg gatctgacca agccgaacgg
      661 attgttcctt gcccgcgatt tcctgatccg cgacgaggat acggtctatg tgaccgaagc
      721 gccctacgtg cagtggaaca aggtgttgtc ggcaatcacc ggcggtgtcc gacaggccga
      781 caatctcagc aaactgggga actagccctg ccatggcggc ggatgagggc atggccgccg
      841 ggggcgaacc ccggcggctt ttcgtgttca atgggggctt tttcacccgc ccgcgcctgc
      901 ggcggatgat ggaactggcc ggctggagaa tcgccgccgg cctgccccgc gcgggcgatg
      961 ccatcggcat ctggggcgcc agtccgaccg cgtggcgcgg tcgcgccatc gcgacgcgcc
     1021 ggggttgcgg gctgatcacg gtcgaggatg ccttcctgcg ttcgatcctt ccggggcggg
     1081 cgcgcggcgc ggtggcgcgg cgcggtccga tcggccttct gatcgaccct tgcggggtgc
     1141 atttcgatcc ggcgcggcca tcgctgctgg aacgactgat cgcctcgggc gtgaccgtcg
     1201 cgcatcgcca ggccgcaatc cagggtatcg cccggctgcg atcgctggat ttgtcgaaat
     1261 acaatttcca ccgtccccgg cttgccgcgc ccccgcccgg ctacgtcctg gtcatcgacc
     1321 agacgcgcgg cgacgcctcg ctgctggggg cgggccgcag ccggttcctg gccatgctgg
     1381 aaacggcacg ggccgaacat cccgaccgcc cgatcgtgct gcgcacccat cccgagacag
     1441 ccgccggcct gcgtccgggc cacctgaccg gcgccgatct gcgccccggc gatctgcttt
     1501 gcgacgcccc gatctcgccc tggcggctgg tcgaaaatgc gcacagcgtc tatgccatca
     1561 gctcccagtt gggctacgag gcgctgctgg cag
//
LOCUS       DTVW01000240            1592 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1311174, whole
            genome shotgun sequence.
ACCESSION   DTVW01000240 DTVW01000000
VERSION     DTVW01000240.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1592)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1592)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1592
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1311174"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(1..441)
                     /locus_tag="EYO87_03210"
                     /pseudo
     CDS             complement(1..441)
                     /locus_tag="EYO87_03210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998255.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="competence/damage-inducible protein A"
     gene            543..1337
                     /gene="map"
                     /locus_tag="EYO87_03215"
     CDS             543..1337
                     /gene="map"
                     /locus_tag="EYO87_03215"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I methionyl aminopeptidase"
                     /protein_id="HIC65007.1"
                     /translation="MDESHITREGIRIHVPADFAGMRKAGAMTAQILDEVGVMVEPGV
                     TTGALDDFIRRRIEEMGATSATIGYRGYQHASCISVNHVVCHGIPGDKVLQNGDILNI
                     DVTVIVDGWYGDSSRMYVAGTPSIKAQRLIQVTYDSLMKGIEAVRPGATFGDIGAAIQ
                     AHAEGQRMSVVRDFCGHGLGRVFHAPPNVLHFGRAGKGPVLEEGMFFTIEPMVNLGRP
                     DTKVLADDWTAVTRDKSLSAQFEHSIGVTSQGFEIFTPSDRFFPDF"
     gene            complement(1404..>1592)
                     /locus_tag="EYO87_03220"
     CDS             complement(1404..>1592)
                     /locus_tag="EYO87_03220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007256941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65008.1"
                     /translation="LALGYAGWGPGQLEDEMLQNGWLTGEGREDLIFGADHDGKWQSA
                     LRAQGIDPSLLSAAAGRA"
BASE COUNT          272 a          526 c          507 g          287 t
ORIGIN      
        1 atggaaaagc ccggcgctgc cgagacggcg ttgtcgatca gcgtcgagcc cagcgggatg
       61 cgcgccatgc gcagccggtt gagcgtcagt tccgttccca tccgttcgca gcgttcctgc
      121 aatagcgcgc gcgcggcttc gttgacctcg gccgtggtgc catgggcgat cgcgacggaa
      181 tcggcagatg tcgtcatggg tcggaccgat cccgcccgag gtgaacagca gatcgaaggc
      241 gccgccaagg cttttgtcca gtgcccgcac ggcctccacg atctgatcct gatcgtcggc
      301 cacgattcgt atctcgcgca ggtcaaaccc ggtcgccgtc agcacctggg ccagatgatg
      361 cgcgttgccc tcgcgcgtgc ggcccgacag gatctcgtcc ccgatgacca ggatcgccgc
      421 gcttggatta tccgattgca tatgccgtcc tccgaaggat gccgtgacgt tctaagcccg
      481 cgcgcggggc tggaacaagg ggccgctcgg gtctatctat gcgccatcag aaaggatccg
      541 cgatggacga aagccacatc acacgagaag gcatccgcat tcacgtcccg gcagatttcg
      601 ccggaatgcg caaggccggc gcgatgacgg cccagatcct cgatgaggtc ggcgtgatgg
      661 tcgaaccggg cgtgaccacc ggcgcgctgg acgatttcat ccgccggcgg atcgaagaga
      721 tgggcgcgac ctcggccacg atcggctatc gcggctatca gcatgcaagc tgcatcagcg
      781 tgaatcatgt cgtctgccac gggattccgg gcgacaaggt gctgcagaac ggtgatatcc
      841 tgaatatcga cgtgaccgtg atcgtggatg gctggtatgg cgacagcagc cgcatgtatg
      901 tggccggcac accctcgatc aaggcgcaaa gactgatcca ggtcacctac gattcgctga
      961 tgaaggggat cgaggcggtc cgccccggcg ccaccttcgg cgatatcggc gcggccattc
     1021 aggcccatgc cgaaggccag cgcatgtctg tcgtgcgcga tttctgcggg cacgggctgg
     1081 gccgcgtctt tcatgcgccg ccgaacgtgc tgcatttcgg ccgcgccggc aagggcccgg
     1141 tgctggagga aggcatgttc ttcaccatcg agccgatggt caacctgggg cgccccgata
     1201 ccaaggttct ggccgacgac tggacagccg tgacgcgcga caaatcgctg tcggcgcagt
     1261 tcgagcattc catcggcgtg acctcccagg ggttcgagat tttcacgccc tcggacaggt
     1321 tctttcccga tttctgaccg tcaggcggac atcgccggtc cctctcggcc ctttcctcgc
     1381 atcacgcggc gcggtcgacg cccctaggca cgcccggccg ctgccgatag cagcgagggg
     1441 tcgattccct gcgcgcgcag cgcggattgc cacttgccgt cgtgatccgc gccgaagatc
     1501 agatcctctc tgccctcgcc ggtcagccag ccgttctgca gcatctcgtc ttccagctgc
     1561 cccggtcccc agccggcata gcccagggcc ag
//
LOCUS       DTVW01000241            1080 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1312955, whole
            genome shotgun sequence.
ACCESSION   DTVW01000241 DTVW01000000
VERSION     DTVW01000241.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1080)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1080)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1080
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1312955"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..539)
                     /locus_tag="EYO87_03225"
     CDS             complement(<1..539)
                     /locus_tag="EYO87_03225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009820257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2493 domain-containing protein"
                     /protein_id="HIC65009.1"
                     /translation="MAYDTANTYETIELFGLTEKDAQLPIPEDHILTDHIIRESFEAL
                     LGQLRGTGLEAEIEPLAHGLATILQRRKVALGKEVDRTADKIGALAKSHDGSEIAETA
                     LEEAQARFVQLREIVSAIEVMSEAAAECYEIETGHAFIPAAGSRASVRAQETGAVFEA
                     RQLLEQHDRDTAEKSKVEGV"
     gene            complement(914..994)
                     /locus_tag="EYO87_03230"
                     /pseudo
     CDS             complement(914..994)
                     /locus_tag="EYO87_03230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017360794.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase subunit sigma"
BASE COUNT          162 a          349 c          348 g          221 t
ORIGIN      
        1 accccctcga ctttcgactt ctcggcggta tcacggtcgt gctgctctag gagctgccgc
       61 gcctcgaaga ccgccccggt ctcttgcgcc cggacgctcg cgcgcgaccc ggctgccggg
      121 atgaaggcgt gaccggtctc gatctcgtag cattccgcag ccgcctcgct catcacttcg
      181 atggcgctga caatctcgcg cagctgcaca aagcgcgcct gcgcctcttc gagcgcggtc
      241 tcggcgatct ccgatccgtc gtgggatttt gccagcgcgc cgatcttgtc ggcggtgcgg
      301 tcgacctcct tgccgagcgc caccttgcgg cgctggagga tcgtggcgag cccatgggcc
      361 agcggttcga tttcggcttc aagcccggtc ccgcgcagct gaccgagcaa tgcttcgaag
      421 ctttcgcgga tgatgtggtc ggtcaggatg tgatcctccg ggatcggcag ctgcgcgtcc
      481 ttctcggtca gtccgaaaag ttcgatggtc tcgtaagtgt tcgcggtgtc gtaagccatg
      541 tctggtctcc agtgttcggt tgcaaggcca ccacgtgagt gtggcggcat ggccgaatgc
      601 ctggtttccg aatctgcccg ggtcagggac ggcgcagccg ccggcttgcc gggcgcaaaa
      661 gttttccgtg cgcggcaccc gacacatgcg cgcgcttgcg cacgggaccg caccgcgcca
      721 aaggccccac cctcgccgaa aagttttgcg atccttgacg cgggctgatt tgggggccat
      781 ccggaggata tgcttccgcg ctcatgtgtg tgtgttttga cggtaggttt gcccgacccg
      841 agcaggcaaa cggccagacc ggacgcgtga gacggatgga gcggcgggat cgttttgccc
      901 cgcaaaacag accagagcgc aatccggcgc ggattcggcc cttgatggtg cccagcggcg
      961 cgctcagacg cgcagcaatc tggtcatggg tcaggcggat ctactgcgct ccgcctcctc
     1021 gtctccacgc tctgtagtac ttgccttgga tcatcaagac agacgcgtgc ggtttgctgc
//
LOCUS       DTVW01000242            1191 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1314189, whole
            genome shotgun sequence.
ACCESSION   DTVW01000242 DTVW01000000
VERSION     DTVW01000242.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1191)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1191)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1191
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1314189"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..173
                     /locus_tag="EYO87_03235"
     CDS             <1..173
                     /locus_tag="EYO87_03235"
                     /inference="COORDINATES: protein motif:HMM:PF06629.10"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MipA/OmpV family protein"
                     /protein_id="HIC65010.1"
                     /translation="AAIKFRARYAINDKTAILGEVEYGKLIGDAADSPIVQDDYQPAL
                     RLGIVRKFSFGF"
     gene            274..681
                     /locus_tag="EYO87_03240"
     CDS             274..681
                     /locus_tag="EYO87_03240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65011.1"
                     /translation="MPIRIPVLRQKERAVSEAAARSAQLRKGLCGLPDRVTVKRTSLE
                     KQSQMEVIWPLQRDREQRHALVEAQPKDRQTLRVDIRAARDRHAAVLRELHHDRTNYR
                     MMKLGLEPLAKRAFSPLKRMMDTAAKAVSPVMA"
     gene            713..1191
                     /locus_tag="EYO87_03245"
                     /pseudo
     CDS             713..1191
                     /locus_tag="EYO87_03245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020042633.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
BASE COUNT          238 a          358 c          396 g          199 t
ORIGIN      
        1 ccgccgcgat caagtttcgc gcgcgctacg cgatcaacga caagaccgcc atcctgggcg
       61 aggttgaata tggcaagctg attggcgatg cggcggattc gcccatcgtg caggatgatt
      121 accagcccgc cctgcgactg ggcatcgtgc gcaaattctc gttcgggttc tgatcggatc
      181 ggctggtccg gcaggcaagg cttcctcggt ggtgtcgcgg cacgctgacc gtcgccggat
      241 ccgggaccct tcgaggggcg gaatggtcgc gccatgccga ttcgcattcc ggtcctcagg
      301 cagaaagagc gagccgtttc cgaagcagcg gcaagatcgg cacaattgcg caaaggctta
      361 tgcggcctac cggaccgcgt gaccgtcaaa cgcacttcgc ttgaaaagca aagccagatg
      421 gaagtcatct ggccgcttca gcgtgatcgt gaacagcgtc atgccctggt cgaagcccag
      481 ccaaaggacc gccagacgct ccgggtcgat attcgggcgg cgcgcgaccg acatgctgcg
      541 gttctacgcg agttgcatca tgaccgaaca aactatcgca tgatgaagct agggctggag
      601 cccttggcga agcgcgcctt ctccccgctg aagcgcatga tggatacagc cgcaaaggct
      661 gtgtcgccgg tgatggcgta gcgccagccg cgcggccgta ggtgacgctg tccaccttgc
      721 ggacaagggt atcggcttgc gctcggggac gctggtggat gcaaggatca tagatgcgcc
      781 gtcctcgacc aagtcgggcg cccgtgaccc ccagatgttg tccacgaaaa agggcaacga
      841 ctggtatttc ggcatgaagg cgcacatcgg catcgatgcc tacaggggcg tgacgcacag
      901 cctcgagacc tcgaccgcca ggctgcacga cagccaggtc tgggacgaac tgctgcatgg
      961 ggaggaaggc tcggtctgga ccgacaaggg atatgtcagc gccgagcgcg aggccgagtt
     1021 caaggggcca ggcaagctct ggggcgtgat gcgcagggct cccaagggga ccaattgcat
     1081 cccgtcgatg cgcggattga ccggatcatc gccaaggtgc gcgccagggc cgagcattcc
     1141 ttccgggtga tcaagcgcca gttcggcggc gcgaagaccc gataccgcgg c
//
LOCUS       DTVW01000243            1050 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1314476, whole
            genome shotgun sequence.
ACCESSION   DTVW01000243 DTVW01000000
VERSION     DTVW01000243.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1050)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1050)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1050
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1314476"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1050)
                     /locus_tag="EYO87_03250"
     CDS             complement(<1..>1050)
                     /locus_tag="EYO87_03250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_353010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="indolepyruvate ferredoxin oxidoreductase family
                     protein"
                     /protein_id="HIC65012.1"
                     /translation="GLNTAGYVTGYRGSPLGGVDLQMMREGKRLSEAGVLFQPGLNED
                     LAATAIWGSQQAELRGEGKHDGVFALWYGKGPGVDRSGDVMRHANMAGSSRHGGVVMA
                     MGDDHTGESSTVLHQSDWAMIDAYIPVLSPAGVQEILDLGLYGFALSRFAGVWTGLKT
                     MKDTVEATAVVNGDPHRLNFVSPDFVMPEGGLNIRLGDTPVAQEARMIDYKRWAAEAF
                     SRANRIDRKHWGKPGAKIGFVAAGKNWLDLVHALSLLGIDEAEAERLGLTTYKVGQTW
                     PLDMKSMQEWSENLDLIVCVEEKRKLIEVQLKEAIFDNRHGRRVHGWKHDRTHEELFP
                     TRYALDPVMIAQKIGG"
BASE COUNT          183 a          378 c          293 g          196 t
ORIGIN      
        1 ccgccgatct tctgcgcgat catcaccgga tccagcgcat agcgtgtcgg aaacagttcc
       61 tcgtgggttc ggtcgtgctt ccatccatgc acccgccggc cgtggcggtt gtcgaagatg
      121 gcctctttca gctgcacctc gatcagcttg cgcttttcct cgacgcagac gatgagatcc
      181 aggttctcgg accattcctg catggacttc atgtccagcg gccaggtctg cccgaccttg
      241 taagtggtca ggcccagccg ttcggcctcg gcctcgtcga tacccagcag cgacagcgca
      301 tggaccagat ccagccagtt cttgccggcg gcgacaaagc cgatcttggc accgggtttg
      361 ccccaatgct tgcggtcgat gcggttggca cgggaaaacg cctcggccgc ccaacgcttg
      421 taatcgatca tccgcgcttc ctgcgccacc ggcgtgtcgc ccaggcgaat gttcagcccg
      481 ccctcgggca tgacgaaatc cgggctcacg aaattcagcc gatgcggatc gccgttcacg
      541 accgcggtgg cctcgaccgt gtccttcatc gtcttcaggc cggtccagac gccggcgaaa
      601 cgcgacagcg cgaaaccata aagcccaaga tcaaggattt cctgcacccc cgcaggcgac
      661 agaaccggga tataggcgtc gatcatggcc caatccgact ggtgcagcac ggtcgagctt
      721 tcgccggtat ggtcgtcacc catcgccatg accacgccgc catgtctcga cgaacccgcc
      781 atgttcgcgt gccgcatcac gtcgccgctg cgatccacgc ccggcccctt gccgtaccac
      841 agcgcgaaca cgccgtcatg cttgccctcg ccgcgcagtt cggcctgctg gctgccccag
      901 attgccgtgg cggcaagatc ttcgttcaat cccggctgaa acagcacgcc ggcttccgac
      961 aagcgcttgc cctcgcgcat catttgcagg tccacaccgc ccaggggcga gccgcgatag
     1021 ccggtcacat agcccgccgt gttcagcccc
//
LOCUS       DTVW01000244            1164 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1314635, whole
            genome shotgun sequence.
ACCESSION   DTVW01000244 DTVW01000000
VERSION     DTVW01000244.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1164)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1164)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1164
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1314635"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            8..84
                     /locus_tag="EYO87_03255"
     tRNA            8..84
                     /locus_tag="EYO87_03255"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:1.23"
                     /anticodon=(pos:42..44,aa:Asp,seq:gtc)
     gene            306..>1164
                     /locus_tag="EYO87_03260"
     CDS             306..>1164
                     /locus_tag="EYO87_03260"
                     /EC_number="1.2.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-5-semialdehyde dehydrogenase"
                     /protein_id="HIC65013.1"
                     /translation="MRPARPAARRKAMKDMDESAALIARMGAAARTASVTLATASAER
                     KHAALIGAAEAIRQRADEVLSANAADLDLARKNGLGGAMLDRLRLDRDRLRGIEDGLR
                     AVAEQPDPVGAVIAEWDRPTGLHIQRVRTPIGVLGVIYESRPNVTADAGALALKSGNA
                     VILRGGSESLNSSVAIHDCMVRGLRQAGLPEDAIQLVPVRDRTAVSAMLQAQGLIDVI
                     IPRGGKGLVGLVQREARVPVFAHLEGICHVYVDAAADPDIARRVVLNAKTRRTGICGA
                     AECLLIDRAA"
BASE COUNT          179 a          356 c          430 g          199 t
ORIGIN      
        1 accgaacgcg ggtgtagctc agttggttag agtgccggcc tgtcacgccg gaggtcgcgg
       61 gttcgagccc cgtcaaccgc gccatccttc atcagccttc cccatctctt ttcccgatac
      121 cggcgcgcct tgcccgggcg caggcatgtc gcgtcatgcg tcgccttgtc acgacgacgg
      181 agttgcgacg gaaggcatgg tccgggacgg gcgggtcatc ggtcatatca ggactcctgt
      241 ttccttgcgg gattgggtat gggtgacatt tcacgcgacc gggcacggat cgaacccgtc
      301 atgcgatgcg acccgcgcgc cctgcagcga ggcgaaaggc gatgaaggac atggatgaat
      361 cggcggccct gatcgcgcgg atgggcgcgg cggccaggac ggcctcggtg acgctggcca
      421 cggcctcggc cgagcgcaaa cacgcggcgc tgatcggcgc ggccgaggcg atccgccagc
      481 gggccgacga ggttctttcg gccaatgccg cggatctgga tctggcccgg aagaacgggc
      541 tgggcggtgc catgctggac cggctgcgac tggaccggga ccgtctgcgc ggcatcgagg
      601 acggcctgcg cgcggtggcc gaacaacctg atccggtggg cgcggtgatc gcggaatggg
      661 atcggccgac gggtctgcat atccagcgcg tgcggacgcc catcggggtg ctgggggtga
      721 tctatgaaag ccgtcccaac gtgacggccg acgcgggcgc gctggcgctg aaatcgggca
      781 atgcggtgat cctgcgcggc ggatcggaaa gcctgaattc cagcgtcgcg atccatgatt
      841 gcatggtgcg gggcctgcgc caggcaggtt tgcccgaaga tgcgatccag cttgtgccgg
      901 tgcgcgaccg gaccgctgtc agcgccatgt tgcaggccca gggattgatc gacgtgatca
      961 ttccgcgcgg tggcaaaggt ctggtcgggc tggtgcagcg cgaggcgcgg gttccggtct
     1021 ttgcgcatct ggaaggcatc tgtcacgtct atgtcgatgc cgccgccgat cccgacatcg
     1081 cccgccgcgt ggtgctgaat gccaagactc ggcggacggg gatctgcggt gcggcggaat
     1141 gtctgctgat cgaccgcgcc gcgg
//
LOCUS       DTVW01000245            2352 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1314926, whole
            genome shotgun sequence.
ACCESSION   DTVW01000245 DTVW01000000
VERSION     DTVW01000245.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2352)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2352)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2352
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1314926"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..417)
                     /locus_tag="EYO87_03265"
     CDS             complement(<1..417)
                     /locus_tag="EYO87_03265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009812835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HIC65014.1"
                     /translation="MSDQSETLAPAKRPVISGRVKAALVLFVLFALLPPLAAALNDPF
                     YVLIGTRILAYAIAAMALDLILGYGAMVSFGHAAYLGFGAYAVAILQRYEVNDLILQI
                     LLAMGLSAVFAFVTGAISLRTRGVYFIMITLAFGQMA"
     gene            complement(414..1331)
                     /locus_tag="EYO87_03270"
     CDS             complement(414..1331)
                     /locus_tag="EYO87_03270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009805914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HIC65015.1"
                     /translation="MVNLFILQLLNGLQLGVLLFLIAAGLTLVFGIMDVINLAHGVLY
                     MVGAYLIATFAAATGSFWWGLLLMLPAAVVVGLVIEFVVMRRLYARSHLDQVLATFGL
                     VMIANEAVRMIWGTSPLAVPLPEIFSGAVPLMGPLQYPVYRIAIIVAGLAVALGLFVV
                     VNYTRVGMLLRAGATNRDTVSALGVNINRLFAIVFTLGAVLACLAGALVAPILSVDTG
                     MGESVLILTFVVVVIGGIGSIKGAFLGALLVAVVDTLGGVFGPIWLRSVMEPSAAGQM
                     GRVLAPMLVYILMAVILFAKPAGLFGRRA"
     gene            complement(1362..>2352)
                     /locus_tag="EYO87_03275"
     CDS             complement(1362..>2352)
                     /locus_tag="EYO87_03275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009209336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HIC65016.1"
                     /translation="ALGGMQTEIIVVDDEGKPDLAAEKARELVERENVDFVVGPIFSN
                     ILMAMVQPVTSTGTILISTNAGTSTLAGESCNKNFFTTSYQNDQNHEVMGAYAEKMGY
                     KNVFLMTPNYQAGKDSQAGFKKAYTGATSGEVYTELGQLDFSSELAQIAAFQPDAVFT
                     FMPGGMGVNLVKQYSQAGLTSIPFLSAFTVDETTLPATQDAALGMLGGANWAPDLDND
                     ANKAFVDAYIAKYNAVPGTYAMQAYDAAQLIDSAVSKLGGDLTDRDAVRAAIHEADFD
                     SPRGDFSFGSNNFPIQDFYLVEAVKREDGMYGTSIKEKIFDDYADNYASQCKM"
BASE COUNT          499 a          730 c          729 g          394 t
ORIGIN      
        1 cgccatctgc ccgaaggcaa gtgtgatcat gatgaaatag accccccgtg tccgcagcga
       61 gatcgcgccg gtcacgaagg cgaaaacggc ggagaggccc atcgccaaga ggatctgcag
      121 gatcaggtcg tttacctcgt agcgttgcag gatcgccacg gcataggcgc cgaagcccag
      181 gtaggcggca tggccgaagc tgaccatcgc gccgtagcct aggatcaggt ccagcgccat
      241 ggcggcgatg gcataggcca gtatccgggt gccgatcaga acgtagaagg gatcattcag
      301 cgccgccgcc aacggcggca gcagcgcaaa caggacaaag agaaccagcg ctgccttgac
      361 gcggcccgag atgaccggac gcttggcggg tgcgagtgtc tcgctctggt cgctcatgcg
      421 cgtcgcccga agaggcccgc aggcttggca aagagaatga cggccatcag gatatagacc
      481 agcatcggcg ccaggacgcg gcccatctgg cctgctgccg acggttccat gaccgaccgc
      541 agccagatcg gcccgaagac acctccgaga gtgtcgacca cggccaccag aagcgcgccg
      601 aggaaggccc ccttgatcga accgatgccg ccgatcacca cgacgacgaa ggtcaggatc
      661 aacacgcttt cgcccattcc agtatcgacc gagagaatcg gtgcgacaag cgcgccggcc
      721 agacaggcca aaaccgcgcc caaggtgaaa acaatggcga acagccggtt gatgttgacg
      781 cccaatgccg agacggtatc gcggttcgtg gcacccgcgc gcaacagcat gccaacgcgg
      841 gtatagttga ccaccacgaa aagccccagg gccaccgcca gccctgcgac gatgatcgcg
      901 atgcggtaaa ccggatattg cagcggtccc atcagcggga ccgcgcccga gaagatctcc
      961 ggcagcggca ccgccagcgg cgaggtgccc cagatcatcc tgaccgcctc gttggcgatc
     1021 atgacaagcc cgaaggtcgc cagcacctga tcgagatgcg agcgggcata taatcgtcgc
     1081 atcacgacga attcgatcac cagccccacg acgaccgcgg ccggcagcat cagcagaagt
     1141 ccccaccaga agcttccggt cgcagccgcg aaggtggcga tcagataggc acccaccatg
     1201 taaaggacgc catgggccag attgatcacg tccatgatgc cgaagaccaa cgtcagcccc
     1261 gcagcaatca ggaacagcag gacgccaagt tgtaacccgt tgagaagctg caagataaac
     1321 aagttcacca tggacgcgat ctcccctgac cggtcagccg gtcacatctt gcactgactg
     1381 gcgtagttat cggcgtaatc gtcgaaaatc ttctccttga tggaggttcc gtacatgcca
     1441 tcttcgcgct tcacggcttc gacaagatag aagtcctgga tcgggaagtt gttcgacccg
     1501 aacgagaaat cgccgcgcgg gctgtcgaaa tcggcttcgt ggatcgccgc ccgcactgcg
     1561 tctcggtcgg tcagatcacc gccaagcttg gacacggcgc tgtcgatcag ctgggccgcg
     1621 tcataggcct gcatggcata ggtgccggga acggcgttgt acttggcgat ataggcatcg
     1681 acgaaggcct tgttggcgtc gttgtcgagg tccggggccc agttcgcgcc gcccagcatg
     1741 cccaaggccg catcctgcgt cgcaggcaac gtggtttcat ccaccgtgaa ggccgacagg
     1801 aacgggatcg aggtcaggcc cgcctgactg tactgcttga cgaggttcac gcccatgccg
     1861 cccggcatga aggtgaagac cgcatcgggc tggaacgccg cgatctgcgc cagctcggag
     1921 gaaaagtcga gttggcccag ttcggtatag acctcgcccg aggtggcgcc ggtataggct
     1981 ttcttgaagc ccgcctggct gtccttgcct gcctgatagt tgggcgtcat caggaagacg
     2041 ttcttgtacc ccatcttttc ggcataggcg cccatcacct cgtggttctg gtcgttctga
     2101 taggacgtgg tgaagaagtt cttgttgcag ctttcgcccg ccagcgtcga ggtgccggcg
     2161 ttggtcgaga tcaggatcgt gccggtcgag gtgacgggct gcaccatcgc catcaggatg
     2221 ttggaaaaga tcgggccgac gacgaaatcg acgttctccc gctcgaccag ttcgcgggcc
     2281 ttctctgcgg cgaggtcggg ctttccctcg tcgtcgacga cgatgatttc ggtctgcatg
     2341 ccgccgaggg cg
//
LOCUS       DTVW01000246            1058 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1315325, whole
            genome shotgun sequence.
ACCESSION   DTVW01000246 DTVW01000000
VERSION     DTVW01000246.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1058)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1058)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1058
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1315325"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..756
                     /locus_tag="EYO87_03280"
     CDS             <1..756
                     /locus_tag="EYO87_03280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008334850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxo-hepta-3-ene-1,7-dioic acid hydratase"
                     /protein_id="HIC65017.1"
                     /translation="AAEDDRTQTGLLSIRHPGITLDDAYAIQSAQMAQKLAAGRKVIG
                     WKIGLTSRVMQEALGIDTPDSGVLYDDMLFQTGAAVSKGRFIQPRVEAEIAFVMKAPI
                     DGTVTRDDVLAATQAVVPSLEILDTRILRSDPATGQLRQIFDTVADNAANAGIVLGRE
                     RHLPDAKDLRWTGAIVRKNGEVVATGLGAAVLDDPVMGIVWLARRMGKYGQRIEAGQV
                     ILSGSFIAPIECPPGTTVDADFGSFGSVSISFN"
     gene            765..>1058
                     /locus_tag="EYO87_03285"
     CDS             765..>1058
                     /locus_tag="EYO87_03285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017528296.1"
                     /note="catalyzes the retro-aldol cleavage of
                     2-keto-3-deoxy-L-rhamnonate to pyruvate and lactaldehyde;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-keto-3-deoxy-L-rhamnonate aldolase"
                     /protein_id="HIC65018.1"
                     /translation="MPPPKNSFKARLKSGDTQIGLWMGLGDPSVAELASGCGFDWMVI
                     DAEHGPNGLRDVLAQLRAVGERSHAVVRTRDDNRAEIKQMLDIGARTLLVPMIE"
BASE COUNT          203 a          323 c          329 g          203 t
ORIGIN      
        1 gccgccgaag acgaccgcac gcagactggc ctgctatcaa tccgccaccc cggtataaca
       61 ctggacgacg cctatgcgat ccagtccgcc cagatggcgc agaagctggc ggccggtcgc
      121 aaggtgatcg gctggaaaat tggcctgacc tccagggtta tgcaggaggc gctcgggatc
      181 gatacgccgg actctggtgt gctctatgac gacatgctgt tccagaccgg cgccgccgtt
      241 tccaagggcc gcttcataca gccgcgcgtc gaggccgaga tcgcctttgt tatgaaggca
      301 ccaatcgacg gtaccgtcac tcgcgacgac gtgcttgccg cgacgcaggc cgttgtgcct
      361 tcgcttgaaa ttctcgacac gcggattctg cggtccgatc cggcgacggg acagctgcga
      421 cagatattcg acactgttgc cgataatgcc gccaacgcgg gtatcgtgct gggccgcgaa
      481 cgccacctgc cagatgcgaa agatctgcgc tggaccgggg cgatcgtgcg caagaacggc
      541 gaggtcgttg caaccgggct tggcgcggcg gtgttggatg atccagtcat gggcatcgtc
      601 tggctggccc ggcgtatggg caaatacggt caacgaatcg aggcaggaca ggtgatcctg
      661 tccggaagct tcatcgcgcc aattgaatgc ccgccgggca ccactgtcga tgcagacttc
      721 ggttcgtttg gctccgtttc catttctttc aactgaggta tcccgtgccg ccccccaaga
      781 acagcttcaa ggctcgcctt aaatccggcg atacacaaat cggtctctgg atggggcttg
      841 gcgatccatc tgtcgctgaa ctcgcttcgg gctgcggctt cgactggatg gtgattgacg
      901 cagagcacgg gcccaacggg cttcgcgacg tgttggccca acttcgcgcc gtgggcgaac
      961 ggtcgcatgc cgttgtgcgc actcgcgacg acaaccgggc cgaaatcaaa cagatgctcg
     1021 acatcggagc gcgcacgcta ctggtgccaa tgatcgaa
//
LOCUS       DTVW01000247            1519 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1316595, whole
            genome shotgun sequence.
ACCESSION   DTVW01000247 DTVW01000000
VERSION     DTVW01000247.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1519)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1519)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1519
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1316595"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(88..666)
                     /locus_tag="EYO87_03290"
     CDS             complement(88..666)
                     /locus_tag="EYO87_03290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine biosynthesis protein ThiJ"
                     /protein_id="HIC65019.1"
                     /translation="MGDPVLKPLLIVLIDGFADWETPLIAGIGGDFYGLNARYVTPGG
                     GDLTSIGGLRVAGLPDFLPRGDEVIVLCGSDGWCRADAPDLSVPLREAHDNGQTVAAI
                     CAATLSLARAGLLEGRAHTSNGLDFLKYHLPDYSAQQTYRDLPHAVADGGIVTAPGTA
                     PVTFAGEVFRAAGLSQDKLAQFRQIATAEHRA"
     gene            complement(680..1102)
                     /gene="dksA"
                     /locus_tag="EYO87_03295"
     CDS             complement(680..1102)
                     /gene="dksA"
                     /locus_tag="EYO87_03295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase-binding protein DksA"
                     /protein_id="HIC65020.1"
                     /translation="MKAQTFLPQDYRPAEDEPFMNERQLEYFRRKLEAWKQELLDQSA
                     ETLEGLQDSARSVPDLADRASEETDRALELRTRDRQRKLVSKIDSALRRIETGEYGYC
                     EMTGEPISLKRLDARPIATMTLEAQERHERRERVHRDD"
     gene            1274..>1519
                     /locus_tag="EYO87_03300"
     CDS             1274..>1519
                     /locus_tag="EYO87_03300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HIC65021.1"
                     /translation="MQFTGTDRYVAPPDLAIAVNAAVTLERPLLVKGEPGTGKTELAR
                     QVAASLGMPIIEWHVKSTTKAQQGLYEYDAVSRLRDSQ"
BASE COUNT          264 a          503 c          486 g          266 t
ORIGIN      
        1 cgccgcgccg cgccagcgcg acggctgccg tcagcccggc gacgcccgcc ccgatgacgg
       61 tcaccgggcg gtccgccagc acccctttca tgcgcgatgt tcggcggtgg cgatctgacg
      121 gaactgggcc agcttgtctt gcgacagacc ggcggcgcga aagacttcgc ccgcgaaagt
      181 gaccggcgcc gtgcctgggg cggtgacgat tccgccgtcg gcgacggcat ggggcaggtc
      241 gcgataggtc tgctgcgccg aataatccgg aaggtgatat ttcaggaaat cgagcccgtt
      301 cgaagtatgg gcgcgtccct ccagcaagcc ggcacgcgca agggacagcg tagccgcgca
      361 gatcgccgcg accgtctggc cattgtcatg cgcctcgcgc agcggaaccg acaggtcggg
      421 cgcatccgct cggcaccagc cgtcgctgcc gcagagcacg atgacctcat caccgcgagg
      481 caggaaatcc ggcagaccgg caacccgcaa accgccgatc gaggtcagat ctccgccgcc
      541 gggcgtgacg tagcgcgcgt tcaggccgta gaaatcccca ccgatccctg cgatcagcgg
      601 ggtttcccaa tcggcgaagc cgtcgatcag gacaatgagg aggggtttca gcaccggatc
      661 gcccatctcg ccgccgcgat caatcgtcgc gatgcacgcg ctcgcggcgt tcgtggcgtt
      721 cctgcgcttc cagcgtcatc gtggcgatgg gacgggcatc cagccgtttc aggctgatcg
      781 gctctccggt catctcgcaa tagccgtatt cgcccgtctc gatccggcgc agcgccgaat
      841 cgatcttgct gaccagtttg cgctgacggt cgcgggtgcg cagttccagc gcgcggtcgg
      901 tttcctcgct ggcccgatcg gccagatcag gaaccgaacg ggcgctgtct tgcagaccct
      961 ccagcgtctc tgcggactga tcaagcaatt cctgcttcca cgcctccagc ttgcgccgga
     1021 aatattcgag ctggcgttca ttcatgaacg gctcgtcctc ggcggggcga taatcttgtg
     1081 gcaggaaggt ctgggctttc atacgtcctc cggctgggcc gggtgggtct gtaatccggc
     1141 accttgcgcg cccccataaa gtatgatggg caccttgtca ctaggtgata ctgccctgat
     1201 cgtgcccgtc tcgcgtcatg gttgcagatt gcacccgttt cgcccaagcg gttcacgcga
     1261 aaggagactt cccatgcagt tcaccggcac ggatcgttat gtcgccccgc ccgatctggc
     1321 catcgcggtc aacgccgccg tgacgctgga acgtccgctg ctggtcaagg gcgaaccggg
     1381 aacgggcaag accgaacttg cccggcaggt ggccgccagc ctgggcatgc cgatcatcga
     1441 atggcatgtg aaatcaacga cgaaggcgca gcaagggctt tacgaatacg atgcggtcag
     1501 ccggctgcgc gacagccag
//
LOCUS       DTVW01000248            1184 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1319020, whole
            genome shotgun sequence.
ACCESSION   DTVW01000248 DTVW01000000
VERSION     DTVW01000248.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1184)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1184)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1184
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1319020"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..813)
                     /locus_tag="EYO87_03305"
     CDS             complement(<1..813)
                     /locus_tag="EYO87_03305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008887930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class IV"
                     /protein_id="HIC65022.1"
                     /translation="MTPQSSSSSQSYVKDPRNDGVEIYVNGEFFSRDEAKVSIFDAGF
                     VLGDGVWEGIRLIKGRLLAIDEHIDRIFEGANALQIDIGFGKAELVDEIWKCLGHNEM
                     EDGVHIRLMISRGRKSTPNQDPRFIVGGATIVIVAEWKQPNPELKASGIKLMTSTIRC
                     STPDVFDLRLNSHSRLNFIQALIQAINMGADEALMLDDRGFVASCNSTNFFIIRGQEL
                     WTSDGQTCFNGITRKKAITLWREAGLVVREKAFTLAEVYAADEAFVTGTLGGI"
     gene            complement(854..>1184)
                     /locus_tag="EYO87_03310"
     CDS             complement(854..>1184)
                     /locus_tag="EYO87_03310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018903453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HIC65023.1"
                     /translation="RLSGGQQQRVAIARALSMQPEILLFDEPTSSLDPELVGEVLRVI
                     NKLAEEGRTMLLVTHELGFAYHFATKVIFLADGVFHEVGTPDEVLKNPRKPRTRDFLR
                     RFGEFAF"
BASE COUNT          228 a          345 c          372 g          239 t
ORIGIN      
        1 gatgccgccg agcgtgccgg tcacgaaggc ctcgtctgcc gcgtagacct cggccagtgt
       61 gaaggccttt tcgcggacga caaggcccgc ctcacgccaa agcgtgatcg ccttcttgcg
      121 cgtgatgccg ttgaagcagg tctgcccgtc cgaggtccag agttcctggc cccggatgat
      181 gaagaagttg gtcgagttgc aggaggcgac gaaaccgcga tcgtcaagca tgagcgcctc
      241 gtccgcgccc atgttgatcg cctggatcaa agcctgaatg aagttgagac gtgagtgcga
      301 attgaggcgc aggtcgaaga catcgggcgt cgaacagcgg atggtcgagg tcatcagctt
      361 gataccgctt gccttcagtt cgggattggg ctgtttccac tcggccacga tcacgatcgt
      421 tgcaccaccg acgataaagc gcggatcctg gttcggcgtc gacttgcgcc cgcgcgagat
      481 catcaggcgg atgtggacgc cgtcctccat ctcgttgtgc ccaaggcatt tccagatttc
      541 atcgaccagt tcggccttgc cgaagccgat gtcgatttga agcgcgttcg caccttcaaa
      601 gatgcggtcg atgtgctcat cgatggccag cagcctgccc ttgatcaggc ggataccttc
      661 ccaaacgccg tcgccgagca cgaaccccgc gtcgaagatc gagaccttgg cctcgtcacg
      721 gctgaagaat tcgccgttca catatatctc gacgccgtcg ttgcgcgggt ctttcacgta
      781 gctctgggaa gaggagctgc tttgaggggt catgatcata ccttggtctt gagatgtctg
      841 gatcgggcgc gtttcagaac gcgaattctc cgaagcgccg gagaaagtcc cgcgtgcgcg
      901 gctttcgcgg gttcttgaga acctcgtcgg gggtgccgac ctcgtggaaa acgccatcgg
      961 cgagaaagat caccttggtg gcgaagtggt aggcaaagcc aagctcatgc gtgacaagca
     1021 gcatagtccg cccttcttcg gccagcttgt tgatgacgcg cagcacctcg cccacaagtt
     1081 cggggtcgag cgatgaggtc ggctcatcaa agagcaggat ctcgggctgc atcgacagcg
     1141 ctcgggcgat ggcgacgcgc tgctgctggc cgccggaaag gcgc
//
LOCUS       DTVW01000249            1295 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1322056, whole
            genome shotgun sequence.
ACCESSION   DTVW01000249 DTVW01000000
VERSION     DTVW01000249.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1295)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1295)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1295
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1322056"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..131
                     /locus_tag="EYO87_03315"
     CDS             <1..131
                     /locus_tag="EYO87_03315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009799743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="XRE family transcriptional regulator"
                     /protein_id="HIC65024.1"
                     /translation="SDLADIIKRHPVEMSALLRTANGLSAEDLARLSREAGKAKGK"
     gene            176..940
                     /locus_tag="EYO87_03320"
                     /pseudo
     CDS             176..940
                     /locus_tag="EYO87_03320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011314551.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ImmA/IrrE family metallo-endopeptidase"
     gene            1021..1239
                     /locus_tag="EYO87_03325"
                     /pseudo
     CDS             1021..1239
                     /locus_tag="EYO87_03325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009799741.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT          252 a          410 c          390 g          243 t
ORIGIN      
        1 catccgatct cgccgacatc atcaagcggc atcctgtcga aatgtctgcg ctgctgcgaa
       61 ccgccaacgg tctgagcgcc gaggacctgg cccggctttc tcgggaggca ggaaaggcca
      121 agggcaagtg aagccaccgg ggcatggccc cgctgatgca gatgaaggat gacggatgag
      181 ccgatttgtt ccctatcttg ccgaagaggc tatcgagcgc gacgccgctt cccttatcgg
      241 agagtatgag cgcgctcggg gcgtgacgat cgagccgccc atccctgttg aggacatcgt
      301 ggaaaagtac ctcaagctgc ggattgattt cgacgacatg cacgcgcgcc acaatgttcc
      361 tcgccctccg aacggccagc ccgacatcct cggcgcgatc tacggcgacg gaagcatatt
      421 catcgacgaa agcctcgatc ctgaggagaa cccctcgcgg gagggccgct atcgcttcac
      481 gctggcccac gagggcggcg ggcactggcg gctgcatcag cacctgatcg tgcaggacgc
      541 ggcgcaaacg tccttccttg atgccgcgag cgaacccaag ttcatctgcc ggtcgcgcga
      601 ggcaaaggag cgggtggaat ggcaggccga tttctatgcc tcctgcctgc tgatgccgcg
      661 caagatggtc tttgccgcgt ggaacgagtt ctttcccgac cggaagcagc gcgtcctcca
      721 accagaaacg ccagttgcgc actccttcgt cgagattccg cgcatccatg cttccgttgg
      781 cgatttcgac atttctgaaa cagaagacga ggcgctggaa cgcttctgca agccgctggc
      841 cgagcgtttc gtcgtttccc caatcgccat gcgcatccgg ctggaaaagc ttggcttgct
      901 tcatcgtatg gtgccgctcc agcggctttt gtccggcagg aaatccggcc ccttttttga
      961 cgagactgta aagtgtaaag tggacaggcg aaatacggca cagcggcgcg ggaggacggg
     1021 ttcgagaccc gagacttcta tctcgcctgc ttcatgcgct gcaccggata cgaactgctc
     1081 gatctgcgcg ccgagggacg gcgcaaggtg ttcgtcttcc gggaccgccc gtcccggcgc
     1141 gaggacatgc tttcgttcta cggcgacggg gcgacggtgc cgcccctcgc gtttttcacc
     1201 accatcaagg acatgaaggc gctgctgcac aatgcgtgag aaaactcccc atcccaacga
     1261 cggcctgtcc aacggccctc aactgcgcca ggcgc
//
LOCUS       DTVW01000250            1267 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1322265, whole
            genome shotgun sequence.
ACCESSION   DTVW01000250 DTVW01000000
VERSION     DTVW01000250.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1267)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1267)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1267
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1322265"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>1267
                     /locus_tag="EYO87_03330"
     CDS             <1..>1267
                     /locus_tag="EYO87_03330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010388764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HIC65025.1"
                     /translation="VLQSIFAQNSAARVVVEPDIANSKIHTLNKRLGFVHTQQIQLGE
                     KAAYLGFCNKAAFDRHSQLFTDSLAPLQTDYVIQPHWQWANRHLQAKALTELVHERLL
                     AAETTKRGFKVNVEGGYFIFNGRAMALNHIDIDEPSLCFYNLNEELQPLDVLHFFSMQ
                     GPALGLTGKRLATYLEELNATLASACFKRENNTLTAAQLANLGLQKIEAAMSEGHPAF
                     VANNGRIGFSKADFLRYAPEVGKPFKVLWLAAHKAVCDFAHSEYFADYPSHISDELDL
                     TTRDAFNKALKAQNLNPGDYLLIPAHPWQYQHKLSVVFANELANQRLVYLGEGDDLYQ
                     AQQSIRTLYNCSHPHKPYLKVALSILNMGFMRGLSRAYMAVTPAINDWVFAKVSQDQQ
                     LAGANFTALREYATLGYAHHTFEQHALGDT"
BASE COUNT          360 a          269 c          289 g          349 t
ORIGIN      
        1 gcgtgctgca aagtattttt gctcaaaaca gtgccgcccg tgttgtggtt gagcccgaca
       61 ttgctaatag taaaattcat acgttaaata aacgtttggg gtttgtgcat acccagcaaa
      121 ttcaactggg cgaaaaagcc gcttatttag gcttttgtaa taaagcagcc tttgataggc
      181 acagccaact atttactgat tcgttagcgc ctttgcaaac tgattacgtg atacagccac
      241 attggcaatg ggcaaatcgg catttacaag ctaaagcact caccgagcta gtgcacgagc
      301 gtttattggc cgcagagaca acaaagcgag gctttaaagt gaatgttgaa ggcggttact
      361 ttatttttaa tggccgtgct atggcactaa accacattga tatagacgag ccaagcttat
      421 gcttttacaa tcttaacgaa gagctgcaac cactagatgt gttgcacttt tttagtatgc
      481 aagggcctgc gctaggttta acgggtaagc gccttgccac ctaccttgaa gagctaaatg
      541 ctactttagc cagtgcgtgc tttaaacgtg aaaataacac gttaacagcg gcgcagttag
      601 ctaatttagg gctgcaaaaa atagaagccg caatgagtga agggcatcct gcctttgttg
      661 ctaataatgg ccgcattggt tttagtaaag ctgacttttt acgttatgcg ccagaagtag
      721 gcaaaccgtt taaagtactg tggttagcag cgcataaagc ggtatgcgac tttgcccata
      781 gtgaatactt tgccgattac ccaagccata taagtgatga gctagattta accacccgag
      841 atgcgtttaa caaagcgcta aaagctcaaa acctaaaccc cggtgattac ttactcattc
      901 ctgctcaccc ttggcagtac caacataaat tgagtgtggt atttgcaaat gagttggcaa
      961 atcagcgatt agtgtattta ggtgaaggtg acgatttata tcaagcgcaa cagtcaattc
     1021 ggaccttata taattgctcg cacccgcata agccgtattt aaaagtggcg ttgtcgattt
     1081 taaatatggg atttatgcgt ggcctatcgc gtgcttacat ggcggtgact cctgccatta
     1141 acgattgggt atttgctaag gttagccaag atcaacaact cgcaggcgct aattttacag
     1201 cgcttagaga atacgccacc ttaggttatg cccatcatac gtttgagcaa cacgcccttg
     1261 gggatac
//
LOCUS       DTVW01000251            1473 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1322896, whole
            genome shotgun sequence.
ACCESSION   DTVW01000251 DTVW01000000
VERSION     DTVW01000251.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1473)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1473)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1473
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1322896"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..504
                     /locus_tag="EYO87_03335"
     CDS             <1..504
                     /locus_tag="EYO87_03335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017928527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogen peroxide-inducible genes activator"
                     /protein_id="HIC65026.1"
                     /translation="PPRNDDLESAPLFVDRFLLAGSAARIARLRDDPPEPRDLDPGQL
                     LLLDEGHCLGDQALEVCGLERGSARLDLGAASLATLCRLAAQGMGLTFLPEIAAAQEI
                     AAAPGLTAIRFPAPQPAREVVLLRRASTPSQGWFEDLAAILADAGAALLGPDDMAVMT
                     PAGSARR"
     gene            556..>1473
                     /gene="lipA"
                     /locus_tag="EYO87_03340"
     CDS             556..>1473
                     /gene="lipA"
                     /locus_tag="EYO87_03340"
                     /EC_number="2.8.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018000503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl synthase"
                     /protein_id="HIC65027.1"
                     /translation="MADTSTVPPQSRIPRLRHPEKAHRPDQDQPKKPAWIRVKAPVSE
                     GYKRTRDIMKEHRLSTVCEEAGCPNVGECWSQGHATMMIMGEICTRGCTFCNVSTGRP
                     DALDVFEPGRVAHAVQKLGLNHVVITSVDRDDLDDGGAEHFAQTIRAIRHRSPASTIE
                     VLVPDFLKSAAGALETVVEARPDVFNHNLETVPGLYPSVRPGARYFHSLRLLQRVKEL
                     DPAMFTKSGIMVGLGEDRQGVLQVMDDMRAADVDFMTIGQYLQPTPKHHRVDRFVTPE
                     EFASYEKTAFGKGFLMVSATPLTRSSYHAG"
BASE COUNT          239 a          493 c          492 g          249 t
ORIGIN      
        1 ccgccccgca acgacgatct ggaatccgcg ccgctgttcg tcgaccggtt cctgctggct
       61 ggcagcgcgg cccggatcgc ccgtcttcgc gacgacccgc ccgagccgcg agatctggat
      121 cccggccagt tgctgctgct ggacgagggg cattgcctcg gcgatcaggc gctggaggtc
      181 tgcgggctgg aacgcggttc ggcgcggctt gatctgggcg cggcatcgct ggcgacgttg
      241 tgccgccttg ccgcgcaggg aatgggcttg accttcctgc ccgaaatcgc cgccgcgcag
      301 gaaatcgcgg cggcgccagg gctgaccgcg atccgctttc ccgcgccaca gcccgcccgc
      361 gaggtggtgc tgctgcgccg cgcctcgacc ccctcgcagg gctggttcga ggatctggcc
      421 gcgatccttg ccgatgccgg ggcggcgctg ctggggcccg atgacatggc cgtcatgacc
      481 ccggcgggca gcgcgcggcg ttgatccgct gcgtctttgt gtttacctag aacgaaaccc
      541 agcgaaagcg ttgacatggc cgataccagc accgtcccgc cgcaatcccg gattccgcgc
      601 ctgcgccacc cggaaaaggc tcaccggccc gatcaggacc agccgaagaa gccggcctgg
      661 atccgggtca aggcgccggt cagcgaaggc tacaagcgca cccgcgacat catgaaggaa
      721 caccgcctct cgaccgtctg cgaagaggcg ggctgcccca atgtcggcga atgctggagc
      781 cagggtcacg ccacgatgat gatcatgggc gagatctgca cccgcggctg cacgttctgc
      841 aatgtctcca ccggccggcc ggacgcgctg gacgtgttcg agccggggcg cgtggcccat
      901 gcggtgcaga agctgggcct gaatcatgtc gtcatcacca gcgtggaccg cgacgacctg
      961 gatgatggcg gggccgaaca tttcgcccag acgattcgcg ccatccgcca ccgcagcccc
     1021 gcgtccacca tcgaggtgct ggtccccgat tttctgaaat cggccgccgg tgcgctggag
     1081 accgtggtcg aggcacggcc ggatgtgttc aaccacaacc ttgaaaccgt gcccggcctc
     1141 tatccttcgg tccggcccgg cgcgcgttat ttccattcgc tgcggctgtt gcagcgggtc
     1201 aaggaactgg atccggcaat gttcaccaaa tcgggcatca tggtcggtct gggcgaggac
     1261 cggcagggcg tgttgcaggt gatggatgac atgcgcgcgg cggatgtgga tttcatgacc
     1321 atcggccagt atctgcaacc gacgccgaaa catcaccgcg tggatcggtt cgtcacgccc
     1381 gaggaattcg caagctacga aaagaccgcg ttcggcaagg ggttcctgat ggtctcggcc
     1441 acgccgttga cgcggtcgtc ctatcatgcg ggc
//
LOCUS       DTVW01000252            1186 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1325529, whole
            genome shotgun sequence.
ACCESSION   DTVW01000252 DTVW01000000
VERSION     DTVW01000252.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1186)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1186)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1186
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1325529"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..776)
                     /locus_tag="EYO87_03345"
     CDS             complement(<1..776)
                     /locus_tag="EYO87_03345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="J domain-containing protein"
                     /protein_id="HIC65028.1"
                     /translation="MAGDPYADLGLTKSASEAEIKKAYRKIAKTDHPDLNPDPAATQR
                     FKAASAAYDLLKDPEQRRRFDAGEIDEQGHERPQRRYYRDHAEAAGNPYAQNYGFEGD
                     PDLSDVFSDLFGRRAAGGFGQGFRQEGGREFHMRGQDYRFALEVDFMTAARGGKTRIS
                     LPEGGDLEVTIPRGVRDGQTIRLKGKGGAGMGQGGPGDAYLTVSVAPHPDFRREGDDI
                     FLTLPITLDEAVLGAKVAAPTVDGPVNLTIPRGATTGQKLR"
     gene            complement(941..>1186)
                     /locus_tag="EYO87_03350"
     CDS             complement(941..>1186)
                     /locus_tag="EYO87_03350"
                     /inference="COORDINATES: protein motif:HMM:PF00248.19"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HIC65029.1"
                     /translation="RLTARAIAAADAFGALASGHGWDRVHMAVLWQATRPFKAIPIIG
                     ATSVTQLDHLLAGMEQALPEDLVRAIDRLHRDHPQPY"
BASE COUNT          177 a          410 c          387 g          212 t
ORIGIN      
        1 cgcagcttct ggcccgtggt ggcgcctctg gggatggtca ggttcaccgg cccgtccact
       61 gtcggcgccg cgaccttggc gcccagaacc gcctcgtcca gcgtgatcgg cagcgtcagg
      121 aagatgtcgt cgccctcgcg acggaaatcg gggtggggcg cgaccgagac ggtcagatag
      181 gcatcccccg gaccgccctg gcccatgccc gcgccgccct tgcccttcag ccggatcgtc
      241 tgcccgtcac gcacgccccg ggggatcgtc acctcgagat cgccgccctc gggcagcgag
      301 atccgggtct tgccgcccct ggccgcggtc atgaaatcaa cctccagggc gaaacggtaa
      361 tcctgtccgc gcatgtggaa ttcgcgcccg ccctcctgcc ggaaaccctg cccgaatcct
      421 ccggccgccc ggcgcccgaa cagatccgag aacacatccg acagatccgg atcgccctcg
      481 aaaccataat tctgcgcata gggattgccg gccgcctccg catgatcgcg gtaatagcgg
      541 cgctgtggcc gttcgtgacc ctgttcgtcg atctcgccgg catcgaagcg gcggcgctgt
      601 tcggggtctt tcaacagatc ataggccgcc gatgcggcct tgaagcgttg ggtggccgcc
      661 ggatcggggt tcaggtccgg atgatcggtc ttggcgatct tgcgataggc tttcttgatc
      721 tcggcctcgc tggccgattt ggtcaatccc agatctgcat atggatcgcc tgccatcttc
      781 tgcccccttt gcccgtcttt cggatcaaca agatagaacc tgcgccggtt tcatcaagcc
      841 tcgcccggcc ggctgtgcgg ggggcggctt cgtcgccttg gcccggcccc gggacgatgc
      901 ccgaccgggc gcggttgcgg acgaaagcgc gacgccggcg tcaatagggt tgcgggtgat
      961 ccctgtgcag ccggtcgatg gcgcggacca gatcctcggg caacgcctgt tccattccgg
     1021 ccagcaggtg atcgagctgt gtcaccgagg tcgcgccgat gatcgggatc gccttgaagg
     1081 gccgcgtcgc ttgccacagc acggccatgt gaacccgatc ccagccgtga cccgaggcca
     1141 gcgcgccgaa ggcgtcggcg gcggcgatgg ctcgggcggt cagacg
//
LOCUS       DTVW01000253            3012 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1332462, whole
            genome shotgun sequence.
ACCESSION   DTVW01000253 DTVW01000000
VERSION     DTVW01000253.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3012)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3012)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3012
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1332462"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..561)
                     /locus_tag="EYO87_03355"
     CDS             complement(<1..561)
                     /locus_tag="EYO87_03355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013960410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HIC65030.1"
                     /translation="MVQPSHLSERRTSVDDIFDYLHDEILSLRLRPGDKISEAEIASR
                     FGVSRQPVRDAFSRLANLDLLLIRPQRATEVRRFSSREIEKSRFIRAAVEKEVLRRAA
                     QHCEAEGAAQLDAALASQEKAIRDSDVEGFGALDYEFHKTLCAIGRADFAFDVIMSEK
                     SKVDRLCTLGLSKEDRMPHLVADHRGI"
     gene            956..1699
                     /locus_tag="EYO87_03360"
     CDS             956..1699
                     /locus_tag="EYO87_03360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013960411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase FabG"
                     /protein_id="HIC65031.1"
                     /translation="MTLKGKTAIVTGGGRDIGRACAMRLAEEGAMVAINYFSSSAGAD
                     SAVEEIRSRGGKAFALCGDLTTRDGADALVKRTLEEFGGIDILVNNTGGLIARKTIPE
                     MSLEHWQAVMDLNVTSTFLMIKSCLPHLKSGSIVNLASQAGRDGGGPGSVAYGASKGA
                     VMTMTRGLAKELGPKIRVNALCPGMIDTDFHNIHTKDEVRRNVEAASPVRRQGTSEDV
                     ANLVYFLVSDEAGFITGANVDINGGMLFS"
     gene            2034..>3012
                     /locus_tag="EYO87_03365"
     CDS             2034..>3012
                     /locus_tag="EYO87_03365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018690457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HIC65032.1"
                     /translation="MTNHFSAGTLLRGVGLACAFVATVSAASAQEITLRGASMFDENH
                     AFTKTMRRFAELVNEKYDGDVTFDLRLNGELGVEADYVTFLQQGVAIDYTIMAPSNMA
                     TFAPSIPLMDMPFLFRDQAQWEAVLSSDVLKPLEDELLEKADIMVIGYTGGGVRNIIS
                     NAPIQNLEELNGFKMRVMGAPIQAQIFSALTAAPSAIAYNEVYNAIQTGVIAGFENEA
                     ASIQNLKFYEVAPYLTLTRHAITVRPIVMSGKTFRNLPEDLQAAVLEAGDEAGAFGRE
                     LESREDAEKLQEMVDAGQLTVLEFEGRDELLKMVVPVQDAYAESLGATDL"
BASE COUNT          627 a          897 c          927 g          561 t
ORIGIN      
        1 gatgccgcgg tgatccgcca ccagatgggg catgcgatcc tctttcgaaa ggcccaacgt
       61 acacagccga tccaccttgg atttctcgct catgatgaca tcgaaggcga agtctgcccg
      121 gccgatggcg caaagcgtct tgtgaaattc atagtcgagc gcgccgaaac cctcgacgtc
      181 gctgtcccgg atcgcctttt cctggctggc aagcgctgcg tcgagctgcg cggcaccctc
      241 ggcttcgcaa tgttgtgccg cccgtcgcag gacttccttt tcgaccgccg cgcggatgaa
      301 acgcgatttc tcgatctctc gggacgaaaa tcgcctgact tccgttgccc gctgcgggcg
      361 gatcaaaaga agatcaaggt tcgcgagacg gctgaatgca tcgcgcacgg gctgacgcga
      421 gacgccgaat cgcgacgcga tctctgcctc ggagatcttg tcaccgggcc gcaggcgcaa
      481 cgacaggatt tcgtcgtgga gatagtcgaa aatgtcatcg acgcttgtcc gccgctcact
      541 caaatggctt ggctgcacca tcgcctcatc tccatcctgt gttcattcga agcctcgacg
      601 cgaaggcaca ccatcgggat ggtggcgtcc atgggtaaac gccaacttcg tcggcgaact
      661 cgatgaccca tcgggctgtt gccttgtttt tcaagggttc cacccgtcga atgaccctac
      721 cttactctca tctagtatac cacaaagatt actagtatac cagaaagaca cgacagcgaa
      781 tcggcttgcc ggttcacagg cgacagatgg aggcgtcgca cagggggagg aagctgatgt
      841 ccgggcgcgg atcgcggtat ttcaaagtcc tgactgcgag gatcggccaa cggcctgacc
      901 cggcggcgtg ttgccgcccg gacagacaga cagaaacgta agagaaggac cagacatgac
      961 gctcaaggga aaaaccgcta tcgtgaccgg cggaggtcgc gacatcgggc gcgcttgcgc
     1021 catgcgtctt gccgaagaag gcgcgatggt cgcaatcaac tacttctcca gcagcgccgg
     1081 ggcggacagc gcggtcgaag aaattcgttc caggggcggc aaggctttcg cgctttgcgg
     1141 cgacctgacc acccgggacg gcgcggatgc gctggtgaag cgaaccctgg aagaatttgg
     1201 cggcatcgac atcctggtca acaacaccgg cggtctgatc gcgcgcaaga ccattccgga
     1261 aatgtcgctg gagcattggc aggcagtcat ggacctgaat gtgacgagca cattcctgat
     1321 gatcaagtcc tgcctgccgc acctgaaatc cggttcgatc gtcaaccttg caagccaggc
     1381 cgggcgcgac ggcggcgggc cgggttcggt cgcctatggc gcgtcgaagg gcgcggtgat
     1441 gacgatgacg cgcggtcttg ccaaggaact tggtccgaag attcgcgtca atgcgctttg
     1501 ccccggcatg atcgacaccg attttcacaa catccacacc aaggacgagg tgcgtcgcaa
     1561 cgtcgaggcg gcatcgccgg tcaggcgcca ggggacatcg gaagatgtcg ccaatctggt
     1621 gtatttcctg gtcagtgacg aagccggttt catcaccgga gccaatgtcg acatcaatgg
     1681 cgggatgctg ttctcctgag gcagggacgg gccgcgccca tgtgccggac cgtcgcggag
     1741 acagggtcgg gcaacaggct ttgccgtagc cgtcaggccc gatcgtccca tccttccgct
     1801 tttggcaagg gggctgaagg gcgttgcaca atcaacgtcc cgacccgtcg atcagcagga
     1861 ccattcggca agattgatct ggtatactag aagacaacat gctagtgcaa agatggggag
     1921 ggggagtccg aatcaatacg gcagtctggt cgatccgttc agccctgact gaagcttcga
     1981 cctgccgcgc cgggccaacg gactcgcgcc ccggaatttt cgaggaggaa cacatgacaa
     2041 accacttttc cgccggaacg ctgctgcgtg gcgtcggcct tgcctgtgca ttcgtggcca
     2101 cggtttcggc cgccagcgcg caggagatca cgctgcgcgg tgccagcatg ttcgatgaga
     2161 accatgcttt caccaagacg atgcgccgtt ttgccgaact ggtgaacgaa aaatatgacg
     2221 gcgacgtcac attcgacctg cgcctgaacg gcgaactggg ggtcgaagcc gactacgtga
     2281 cgttcctgca gcagggtgtc gcgatcgact acacgatcat ggcgccgtcg aacatggcga
     2341 ctttcgcgcc gtccatcccg ctgatggaca tgccgttcct gtttcgcgac caggcccagt
     2401 gggaggcggt cttgtccagc gatgtcctga agccgctgga agacgagctt ctggaaaagg
     2461 ccgacatcat ggtgatcggc tataccgggg gcggggtgcg caacatcatc tcgaacgcgc
     2521 cgatccagaa tctggaagaa ctgaacggct tcaagatgcg cgtcatgggg gccccgatcc
     2581 aggcccagat cttttcggcg ctgaccgccg cgccctcggc gattgcctat aacgaggtct
     2641 acaacgccat ccagaccggc gtcatcgccg ggttcgagaa cgaggctgcg agcatccaga
     2701 acctcaagtt ctatgaggtc gcgccctatc tgacgctgac tcgccacgcg atcaccgtcc
     2761 gcccgatcgt gatgagcggc aagactttcc gcaatctgcc cgaggatttg caggccgccg
     2821 tcctggaagc cggcgacgag gccggagcct tcggacgcga actggaatcc cgcgaggatg
     2881 cagagaaact gcaggaaatg gtcgatgccg gccaactgac cgtcctggaa ttcgaaggtc
     2941 gcgacgaact gctgaaaatg gtggttccgg tgcaggatgc ctatgccgaa agcctgggtg
     3001 cgaccgattt gc
//
LOCUS       DTVW01000254            1336 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1333552, whole
            genome shotgun sequence.
ACCESSION   DTVW01000254 DTVW01000000
VERSION     DTVW01000254.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1336)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1336)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1336
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1333552"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..240)
                     /locus_tag="EYO87_03370"
     CDS             complement(<1..240)
                     /locus_tag="EYO87_03370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011750168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HIC65033.1"
                     /translation="MRDYWHGLRRGRAIPARSDVEPRGISRALDYAFILERIAPGAAR
                     MRLAGRHLIQIGIHIRVIDIAVMVIYRHQPHPVRRI"
     gene            565..1188
                     /locus_tag="EYO87_03375"
     CDS             565..1188
                     /locus_tag="EYO87_03375"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HIC65034.1"
                     /translation="MDRTGLLIILSSPSGAGKSTLARRLMEWDPALRFSVSATTRAPR
                     PGEIDGQHYHFITPRDFQALVSRGQMLEHAEVFGNFYGSPRAPVEAAMNEGRDTLFDV
                     DWQGGQQIRASALGGHVVSIFVLPPSLPELERRLRARGQDSEAVIAGRMAKSRAEISH
                     WAEYDYVLVNDDLDRTEAHLRAILTAERLRRGRQGGLGAFVKRLMEG"
     gene            1194..>1336
                     /locus_tag="EYO87_03380"
     CDS             1194..>1336
                     /locus_tag="EYO87_03380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011750170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma carbonic anhydrase family protein"
                     /protein_id="HIC65035.1"
                     /translation="MIWELDGIAPRLDGDAWAAPDAQLIGRVMLEPGASVWWGAVLRG
                     DNE"
BASE COUNT          223 a          407 c          473 g          233 t
ORIGIN      
        1 aatgcgccgc actgggtgtg gctggtgtcg atagatgacc attacggcta tatcaatgac
       61 ccggatgtgg atgccgatct ggatcaggtg gcggccggca aggcgcatcc gcgcggcccc
      121 gggcgcgatc cgttcaagaa tgaaggcgta gtccagggcg cggctgatcc cgcgcggctc
      181 gacatcgctg cgtgcgggga tggcgcggcc gcgccgcagg ccgtgccagt aatcgcgcat
      241 ctcggcgatg atgtgtccgg gctgcacccg gtcgtaatcg gccagccgca gcaactgggc
      301 cgaaccggat gccggatcgg gcccgtcacg atcgctgttg cccttttcgt ctgccaacgg
      361 aaaaccctca catgtcacct tgcacaggga ccggaaaaca atcggtcccg ctgtgatcct
      421 atgtcaatcg cagcacgctt gccgagtcga ttcctaacga atggttaaga ctttccgcgc
      481 cgcgacgggg ccgggacttg accacgaagg cgggctggtt catccccggc ggcgacacag
      541 ggatgccacc gggaaagggt gccgatggat cgaacgggtt tgctgatcat cctgtcctct
      601 ccctcgggcg cgggcaaatc gacgttggcg cgacggctga tggaatggga tccggccctg
      661 cgcttttcgg tctcggccac gacccgtgcg ccccggcccg gcgagatcga tggtcagcat
      721 tatcatttca tcacgccacg ggatttccaa gccctggtca gccgcgggca gatgctggaa
      781 catgccgagg ttttcggcaa tttctacggc tcgccccgcg cgccggtcga ggcggcgatg
      841 aacgagggcc gcgacacgct gttcgacgtg gactggcagg gcggccagca gatccgcgcc
      901 tcggccctgg gcgggcatgt cgtgtcgatc ttcgtgctgc cgccctcgtt gccggaactg
      961 gaacggaggt tgcgcgcgcg cggtcaggac agcgaggcgg tgatcgccgg ccgcatggcc
     1021 aagagccggg ccgagatcag ccattgggcc gaatatgact atgttctggt caatgacgat
     1081 cttgaccgga ccgaggcaca tctgcgcgcg atcctgaccg ccgagcgtct tcgcaggggt
     1141 cggcagggcg gccttggggc cttcgtgaag cggctgatgg aggggtaggg cgcatgatct
     1201 gggaactgga cggaatcgca ccgcgactgg acggcgacgc ctgggccgcc cccgacgcgc
     1261 agttgatcgg gcgggtgatg ctggaaccgg gtgcatcggt ctggtggggc gcggttctgc
     1321 gcggcgacaa cgagga
//
LOCUS       DTVW01000255            1555 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1335470, whole
            genome shotgun sequence.
ACCESSION   DTVW01000255 DTVW01000000
VERSION     DTVW01000255.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1555)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1555)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1555
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1335470"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(121..396)
                     /locus_tag="EYO87_03385"
     CDS             complement(121..396)
                     /locus_tag="EYO87_03385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HIC65036.1"
                     /translation="MVKSDGAAPKNPQPARVVQKKDFVERVLAATGAKRSEARPIIDA
                     TLAQLGEALSAGQTLAVPPLGRGRVNLEKDLRGGDVITLRLRRKPAS"
     gene            complement(560..>1555)
                     /locus_tag="EYO87_03390"
     CDS             complement(560..>1555)
                     /locus_tag="EYO87_03390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010396324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endopeptidase La"
                     /protein_id="HIC65037.1"
                     /translation="MPGPLLDRMEIIPLAGYTEDEKREIAKQHLLPKQIKANGLRKGE
                     FSVSDAALTHVIRYYTREAGVRSLEREIAKLARKSVTEILKGKVKSVEVTPEKAEEYL
                     GVRRHRYGLAEKEDQVGVVTGLAWTSVGGDLLQIEALRLPGKGRMKTTGKLGDVMKES
                     IDAASSFVRSISPEIGVRPPEFDKRDIHVHVPEGATPKDGPSAGVAMVTSVVSVMTGI
                     PVRKDVAMTGEVTLRGNVLAIGGLKEKLLAALRGGIKTVLIPADNEKDLAEIPDNVKT
                     GLTIIPVGNVREVLKRALVRMPDPVEWDEAAEEAAEAARIASGQGGEKGGATVAH"
BASE COUNT          249 a          544 c          457 g          305 t
ORIGIN      
        1 aactcctgac atcttcgatg tgaacgaagc gctctaccac tgagctaatc acccggtgga
       61 cgggctttta gccgcagggt gctgacgatg caagaccgga tcggcgcgaa atgccgcgtg
      121 tcaggatgcg ggcttgcggc gcaggcgcag cgtgatcacg tcgccgccgc gcagatcctt
      181 ttccagattc acccggcccc ggcccagagg cggcaccgcc agcgtctgtc cggccgacag
      241 ggcctcgcca agctgtgcca gtgtcgcgtc gatgatcggc cgcgcctcgg acctcttcgc
      301 gccggtcgct gccagaaccc gctcgacgaa atcctttttc tggacaaccc gtgcaggctg
      361 cggatttttc ggtgccgccc cgtcgctttt caccatttcc caacccctca atcacaaaac
      421 cggaacattc ggtttagcgt ggcgcatcga ttaaccattg gtcaattatg aatcgcccaa
      481 gttccgtgaa aagaaagcgc cgggccagga aaaccctgac ccggcggctg ccaagttcac
      541 caactgcaag ttgcggcgat caatgcgcga ccgtggcccc gcccttttcg cccccctggc
      601 ccgaggcgat tcgcgccgcc tcggcggcct cttcggcggc ctcgtcccac tcgaccgggt
      661 cgggcatccg aaccagggcg cgtttcagga cctcgcggac attgccgacc gggatgatcg
      721 tcagtccggt cttcacgttg tcggggattt cggccagatc cttttcgttg tcggccggta
      781 tcagcaccgt cttgataccc ccgcgcagcg ccgccagcag tttttccttc aacccgccga
      841 tggccaggac gttgccgcgc aaggtgacct caccggtcat cgcgacgtcc ttgcggaccg
      901 gaatgccggt catcaccgac acgacagagg tcaccatcgc caccccggcc gagggcccgt
      961 ccttgggcgt ggcgccttcg ggaacgtgga catggatgtc gcgcttgtcg aattccggcg
     1021 gcctcacccc gatttcgggc gagatcgagc gcacgaagct ggaggccgcg tcgatcgatt
     1081 ccttcatcac gtcgcccagt ttgccggtcg tcttcatccg acccttgccg ggcaggcgca
     1141 gcgcctcgat ctgcaacaga tcgccgccga ccgatgtcca ggccagcccg gtgacgacgc
     1201 cgacctgatc ctctttctcg gccaggccgt agcgatgccg ccgcacgccc agatattcct
     1261 cggccttctc gggcgtcacc tcgacggact tgaccttgcc cttcaggatc tcggtcacgg
     1321 atttgcgcgc cagcttggca atctcgcgtt ccagcgaccg cacccccgcc tcgcgggtgt
     1381 aatagcggat cacatgggtc agggccgcgt cgctgacgct gaattcgccc ttgcgcaggc
     1441 cgttggcctt gatctgcttg ggcagcaggt gctgcttggc gatctcgcgc ttttcgtcct
     1501 cggtatagcc ggccagcggg atgatctcca tccggtccag cagcggtccg ggcat
//
LOCUS       DTVW01000256            1451 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1335474, whole
            genome shotgun sequence.
ACCESSION   DTVW01000256 DTVW01000000
VERSION     DTVW01000256.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1451)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1451)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1451
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1335474"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..244)
                     /locus_tag="EYO87_03395"
     CDS             complement(<1..244)
                     /locus_tag="EYO87_03395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007792994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructose-bisphosphatase class II"
                     /protein_id="HIC65038.1"
                     /translation="MNAPGDFNDRMLSLGLARVSEAAAHASALLIGRGDEKAADQAAV
                     NAMRDQLNMLDIRGVVVIGEGERDEAPMLYIGEKVGN"
     gene            complement(329..580)
                     /locus_tag="EYO87_03400"
     CDS             complement(329..580)
                     /locus_tag="EYO87_03400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BolA family transcriptional regulator"
                     /protein_id="HIC65039.1"
                     /translation="MIADEMRNRLEALRPERLEIVDDSESHRGHAGFREGGESHFHIR
                     MTAAAFAGLSRIERHRLVHRTLGDIVPRIHALSLDLAEA"
     gene            662..1291
                     /locus_tag="EYO87_03405"
     CDS             662..1291
                     /locus_tag="EYO87_03405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010392443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HIC65040.1"
                     /translation="MSSKDPFGFDISAAKDKKRKNKGRRGMSGAFETSTRICEREGCD
                     EAGQYRAPKNPRNLDDYFWFCKEHVREYNANWNYFQGQSEEEFQQFIDNATVWERPTK
                     PFGRAAEEQKWARHGVSDPHEILGANGTAPEARARVAARKLPPAERKALEILEARDGW
                     SRTEIRRQYKSLVKDLHPDMNGGDRSDEDRLAEVVWAWDQVKDSRYFRD"
BASE COUNT          280 a          493 c          453 g          225 t
ORIGIN      
        1 cattgccgac cttttcgccg atatagagca tcggcgcctc gtcgcgctcg ccctcgccga
       61 tgacgaccac gcccctgatg tccagcatgt tcagctgatc gcgcatggca ttgacggcgg
      121 cctgatcagc ggccttttcg tcgccgcgcc cgatcagcag ggccgaggca tgggccgccg
      181 cctcactgac gcgggccaat cccagggaca gcatgcggtc gttgaaatcc ccgggcgcat
      241 tcatgatcgg ttcctcgtca cctgcctcgt cgctgggctt ctacgcggcg ctcgccgggc
      301 gggcaagcct tgacggcgct aacagcgctc aggcctcggc cagatccagc gacagggcgt
      361 ggatccgcgg cacgatatcg cccagcgtgc ggtgaacaag ccggtgccgc tcgatccggc
      421 tcagcccggc aaaggcggcc gcggtcattc ggatgtgaaa atgactctcg ccgccctcgc
      481 gaaaacccgc atgtccgcga tgggattcgc tgtcgtccac gatctccagc cgttcggggc
      541 gcagagcttc cagcctgttg cgcatctcgt ccgcgatcat ccgcacatcc tttcgtcaag
      601 acctttcatg tcgcccgaaa tagcctaaac tgccgcctcc gagtcgcaaa ggtgcccgag
      661 aatgagcagc aaagacccct tcggattcga catttcggcc gcgaaggaca agaagcgcaa
      721 gaacaaggga cgccgcggca tgtcgggcgc cttcgaaacc tcgacccgca tctgcgaacg
      781 ggaaggatgt gacgaggcgg ggcaataccg ggcgcccaag aacccgcgca accttgatga
      841 ttatttctgg ttctgcaagg aacatgtgcg ggaatacaac gccaactgga actatttcca
      901 gggccagtcg gaagaggaat tccagcagtt catcgacaat gcgacggtct gggaaaggcc
      961 gacgaaaccc ttcggccgcg ccgccgagga acagaaatgg gctcgccacg gcgtcagcga
     1021 cccgcacgag atcctgggtg ccaacggcac cgcgcccgag gcccgcgccc gggtcgcggc
     1081 ccgcaaactg ccgccggccg aacgcaaggc gctggaaatc cttgaagccc gcgacggctg
     1141 gtcacggacc gaaattcgcc gccagtacaa gtcgctggtc aaggatctgc atccggacat
     1201 gaatggcggt gaccgctcgg acgaggatcg tctggccgag gtcgtctggg cctgggatca
     1261 ggtcaaggac agccggtatt tccgcgactg aggcggatca cgccgcgccg gtccctcgcc
     1321 ctctttccaa atacctccgg gggggggcgc gtcagcgacg gggggcggcg ccccccttgc
     1381 gacggaacag ccggggcgcg gcggccgcca tcagcagcac cagcgccacc agcaccacca
     1441 cccgcatcga g
//
LOCUS       DTVW01000257            1149 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1335750, whole
            genome shotgun sequence.
ACCESSION   DTVW01000257 DTVW01000000
VERSION     DTVW01000257.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1149)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1149)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1149
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1335750"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..360)
                     /locus_tag="EYO87_03410"
     CDS             complement(<1..360)
                     /locus_tag="EYO87_03410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011746919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HIC65041.1"
                     /translation="MKLTWLGHSGFRLEIEDAVILIDPWLSGNPVFPEKGRDAAIQGA
                     THILLTHGHGDHSGDTLAIAKELKIPVAGIYDLINGWSTHHGIDGIGFNKGGTVDLGR
                     AKVTMVNAAHSSSLDGAD"
     gene            531..>1149
                     /locus_tag="EYO87_03415"
     CDS             531..>1149
                     /locus_tag="EYO87_03415"
                     /inference="COORDINATES: protein motif:HMM:PF13472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SGNH/GDSL hydrolase family protein"
                     /protein_id="HIC65042.1"
                     /translation="MTIFVSGDSNSVRRDGWVAGLIAHPDTPAEVRNISIGGAPSHMS
                     LLRAMRETGMGRGDVLIWAYGINDALYIRNAGYTVDEMIGVLRQIIAICADRGVVFAP
                     MIFQPRRPSQIRRKSPYRAALHDLFGASGIPYFDVDEAYLAVHPDSATLPVEFYQDYL
                     HYANDPAVFGHIVAGALDLIRRGRVPHHPGADLPSIRLVTDFPGAG"
BASE COUNT          186 a          373 c          361 g          229 t
ORIGIN      
        1 gtccgccccg tccagcgaac tggaatgggc cgcgttcacc atcgtcacct ttgcccggcc
       61 cagatcgacg gtgccgccct tgttgaagcc gatcccgtcg attccgtgat gcgtgctcca
      121 gccgttgatc aggtcataga tgccagcgac cggtattttc agctctttcg caatggccag
      181 cgtgtcgccg gaatgatcgc cgtgcccgtg ggtcagcagg atgtgggtcg cgccctgaat
      241 ggccgcgtca cggccctttt cgggaaagac cggatttccc gacagccagg ggtcgatgag
      301 gatcacggca tcctcgattt caaggcgaaa gccggaatgt ccaagccagg tcagtttcat
      361 cgagacctcc tttgcgatgt cggtcgaagc ctagcggcgc cttgtccgac tgaccagagc
      421 gggcgcggct gttgatttcc tctggccgac cgcttacgcg cacgaaccag tgccggtccc
      481 gcgcggctcg ccgacgacag gatgggccgc cacggcaagg agaggagcgg atgacgatct
      541 tcgtctcggg cgattccaat tcggtccgtc gcgatggctg ggtcgccgga ttgatcgccc
      601 atcccgacac gccggccgag gtgcgcaaca tctcgatcgg cggcgcgccc tcgcatatga
      661 gcttgctgcg ggcgatgcgc gaaaccggca tggggcgcgg cgacgtcctt atctgggcct
      721 atggcatcaa cgacgcgctc tatatccgga atgccggcta tacggttgac gagatgatcg
      781 gggtcttgcg tcagatcatt gcgatctgcg cggatcgcgg cgtcgtcttc gcgccgatga
      841 tcttccagcc gcgccgaccc tcgcaaatcc ggcggaaatc gccctatcgt gccgcgctgc
      901 acgatctgtt cggggcaagc ggcatcccct atttcgatgt cgatgaagcc tatctcgccg
      961 tccatcccga cagcgcgacg ctgccagtgg agttttacca ggactatctg cattacgcga
     1021 atgatccggc ggttttcggc cacatcgtcg ccggggcgct ggatctgatc cggcgcggca
     1081 gggtgcccca ccatcccggc gccgatctgc cctcgatccg cctcgtgacg gattttccgg
     1141 gggccgggc
//
LOCUS       DTVW01000258            1285 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1336146, whole
            genome shotgun sequence.
ACCESSION   DTVW01000258 DTVW01000000
VERSION     DTVW01000258.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1285)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1285)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1285
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1336146"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(26..421)
                     /locus_tag="EYO87_03420"
     CDS             complement(26..421)
                     /locus_tag="EYO87_03420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HIC65043.1"
                     /translation="MTDAHLALVVRDHDEAIGFHVDVLGFRLLEGVHQPEQDKRWVLV
                     QPSGGGVSLLLARATSDAQNAVVGDQTGGRVFLFLETDDLRADLARLRRAGIRIIREP
                     RLADCGIAAVFADLYGNLRDLIQRPAEAG"
     gene            complement(436..1218)
                     /locus_tag="EYO87_03425"
                     /pseudo
     CDS             complement(436..1218)
                     /locus_tag="EYO87_03425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010393514.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid aminotransferase"
BASE COUNT          226 a          442 c          387 g          230 t
ORIGIN      
        1 ggatcaaacg gcctagccgc gcaggtcagc cggcctctgc ggggcgctgg atcagatccc
       61 ggagattgcc gtagaggtcg gcgaaaaccg ccgcgatgcc gcaatccgcc aatctcggtt
      121 cgcggatgat ccggatgcct gcccggcgca gtcgggccag gtccgcgcgt aaatcgtcgg
      181 tttccagaaa aagaaagaca cggccgccgg tctgatcgcc gacgaccgcg ttctgggcgt
      241 cgctggtcgc gcgcgccagc agcaaggaaa cgccgccacc cgacggttgc accagaaccc
      301 atcgcttgtc ctgttccggc tgatggacac cttcaagcag ccggaaaccc aggacatcga
      361 catggaaccc gatcgcctcg tcatgatcgc gcaccaccag cgcgagatgg gcgtcggtga
      421 ttcaagcgcg gagattcaag cgcggaccag cgtctcgtaa tcctcggcga tcttgcgcgt
      481 ggtttcgcca acctggaaat gccagtcgcc gatctggccg accggcgtca cctcggcggc
      541 ggtcccggtc aggaaacatt cctgaaaacc ttccagttct tccggcctga tccggcgctc
      601 gtgaaccgaa acgccgttgt ccttcagcat cccgatgatg gtctgccgcg tgatcccgtt
      661 caggaagcgg tcggccagcg gcgtgtgcac ctcgccatcc ctgatgaaga agatgttggc
      721 gccggtcgcc tcggcgacgt agccttccca atccatgaac agcgcgtccg aacagccctt
      781 ggcctcggcc gcgtgtttgg acatggtgca gatcatgtaa aggccggccg ccttggccgc
      841 ggtcgggatc gtttccgggc tgggccgctt ccacttggcc acgtccagct tggcgccctg
      901 ccatttcgca tcgccgtaat agctgcccca ttcccaggcg cagacggcca tccggaccgg
      961 gttccgcgcg gccgaaacgc ccatgtccgg acccgacccg cgccacatca ccgcgcgcac
     1021 ataggcgttg tcgaacccgt tggccttcag cacggcgtcc ttcgctgcgt cgatttcctc
     1081 ggccgtatag ggcgaggtca tgtccaccag ccgtgccgat tcgatcagcc gcaaagaatg
     1141 ttcgtgcccc ttgaagatct tgccgtcata gcagcgttcg ccctcgaaga ccgaactggc
     1201 gtaatgcagc gcatgggtgc atccccgact gccaggattc accgtagccc gtccgcaggt
     1261 cgtgctcctg gccccaggcc cggga
//
LOCUS       DTVW01000259            1720 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1338897, whole
            genome shotgun sequence.
ACCESSION   DTVW01000259 DTVW01000000
VERSION     DTVW01000259.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1720)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1720)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1720
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1338897"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..160
                     /locus_tag="EYO87_03430"
     CDS             <1..160
                     /locus_tag="EYO87_03430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010395308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cysteine desulfurase"
                     /protein_id="HIC65044.1"
                     /translation="PADIARAAREIYVQAGLTDAMPPANVSFIEPEERARIIRWFRAA
                     GAADTAGM"
     gene            complement(229..924)
                     /locus_tag="EYO87_03435"
     CDS             complement(229..924)
                     /locus_tag="EYO87_03435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65045.1"
                     /translation="MILGLPAAGWTATFKANLVELNNSGVSGSVTFVVNEALTLLTVS
                     ARIMGLEPNALHINHVHGRFNEDGTPKDSILPTADLDTDKDGFVEVLEALPNYGDILL
                     SLEPSLALPSSDPSKVHTGPISDASGNLSYDLDFDLTDDAVFFSPVSRVNYTAADLFP
                     LFLREYVVHGQTVPDGVRQDGEGNLLPAGYDATLPVAAAELSPVPLPATGLLLMGGLG
                     FLGAIRKRRRAAV"
     gene            complement(1118..>1720)
                     /locus_tag="EYO87_03440"
     CDS             complement(1118..>1720)
                     /locus_tag="EYO87_03440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011750485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HIC65046.1"
                     /translation="APLGLGRRLIAPLIPPFCAENPGVDVRLRLSDRNVNIVEDAIDL
                     AFFLGDPADSALKWRKIADAPRVLVAAPTYLAAQGTPKRPEDLADHNCLLLRYPRSPE
                     YFWVLDTAEGPQKMMVGGRYDTDDGDVLTGWALAGHGIANRPRYEVAADLAAGRLVEV
                     LPGTPPPPSQFGCLTPHRRLQDPKVRMFADHSVRELKKIF"
BASE COUNT          317 a          557 c          559 g          287 t
ORIGIN      
        1 ccccgcagac atcgcccgcg ccgcgcgcga gatctatgtg caggcgggac tgaccgacgc
       61 gatgccgccc gccaatgtca gctttatcga accggaagag cgggcccgca tcattcgctg
      121 gttccgggcg gcgggcgccg ccgatacggc cgggatgtag gggtctggcc tctgatgccg
      181 atgccggcgg gggcgcggcg acaggttgcc gccgcgccgg aagatttctc agacagccgc
      241 gcggcggcgt ttcctgatgg cacccagaaa gcccaggcca cccatcagca gcagccccgt
      301 cgcgggcaga ggcacgggcg acaattcggc cgcggcaacg ggcagcgtcg cgtcatatcc
      361 cgccggcagc agattgcctt ccccgtcctg gcgcacgccg tcgggcacgg tctggccgtg
      421 aacgacgtat tcgcgcagga acagcgggaa aagatccgcc gcggtgtagt tgacgcgcga
      481 gaccggactg aagaagaccg cgtcgtcggt cagatcgaag tcgaggtcat aggacagatt
      541 tcccgaagcg tcggaaatcg gcccggtatg aaccttggac gggtcgctcg aaggcagcgc
      601 cagcgacggc tccagcgaca gcaggatgtc gccgtaattc ggcagcgcct ccagcacttc
      661 cacaaatccg tccttgtccg tgtccagatc ggccgtgggc aggatcgaat ccttgggcgt
      721 gccatcttcg ttgaagcggc catggacgtg gttgatgtgc agggcgttcg gctccagccc
      781 catgatccgg gcactgaccg tcagcagagt cagcgcctca ttcaccacga aagtgacgct
      841 tccgctcacc cccgagttgt tcagttcgac cagatttgcc ttgaaggttg cagtccaacc
      901 cgccgccggc aggccgagaa tcatcgccgt ggccgcggcg gctatcgttt tctttttatt
      961 acgcaaagac ttacctcctg ataccggcta tccgacagcg gatgccgccg ttaaccttaa
     1021 ccggctggac aggtcgccca cccgatttct cggactatgc tcatcacctc gtcgtgaagc
     1081 cgtcgtgatg aaggggccat gcgaccggct gcgagggcta gaagattttc ttcaactcgc
     1141 gcacggaatg gtcggcgaac atgcggacct tgggatcctg caaccgacga tgcggggtca
     1201 ggcagccgaa ttgcgagggc ggcggcggcg tgccgggcag aacctcgacc agccggcccg
     1261 ccgccagatc ggcggccacc tcgtatcgcg gccggttggc gatgccgtgt ccggcaagcg
     1321 cccaacctgt cagcacgtcg ccgtcatccg tgtcatagcg gccgccgacc atcattttct
     1381 gcggcccctc ggcggtatcc agaacccaga aatattccgg actgcgcgga tatcgcagca
     1441 gcaggcagtt gtgatcggcc agatcctcgg ggcgtttcgg cgtgccttgc gcggccaggt
     1501 aggtgggcgc ggcgaccagt acacgcggcg cgtccgcgat cttgcgccat ttcagcgcgg
     1561 aatccgcagg gtcgccaaga aagaaagcca gatcaatggc atcctcgacg atattcacgt
     1621 ttcggtcgga caggcgcaag cgcacatcga cgccgggatt ctcggcgcag aagggcggga
     1681 tcagcggcgc gatcagacgc cggcccagac caaggggcgc
//
LOCUS       DTVW01000260            1238 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1340260, whole
            genome shotgun sequence.
ACCESSION   DTVW01000260 DTVW01000000
VERSION     DTVW01000260.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1238)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1238)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1238
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1340260"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..463)
                     /locus_tag="EYO87_03445"
     CDS             complement(<1..463)
                     /locus_tag="EYO87_03445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HIC65047.1"
                     /translation="MFPIRDHNPSQRTPYVTYALIAANIVMYLMTLPGVPGGEWLWAR
                     LALYPLAVVNGQLLWGLLTHMFLHAGLLHVGGNMLFLWVFGDNLEDQMGHRGFLAFYL
                     AAGLAAAAGQIAAAPFSPVPMVGASGAIAGVMGGYLLLFPRARIDVIAIFII"
     gene            601..>1238
                     /locus_tag="EYO87_03450"
     CDS             601..>1238
                     /locus_tag="EYO87_03450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001313407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HIC65048.1"
                     /translation="MTSMTDRRNAAISRGVGMTTQIYAERAENAEIWDKDGNRYIDFA
                     AGIAVVNTGHRHPRVIEAVRAQLDRFTHTCHQVVPYENYVALAERLNSLVPGDFDKKT
                     IFATTGAEAVENAVKIARHHTQRPGIISFAGGFHGRTFMGMALTGKVQPYKAGFGPMM
                     PDIWHLPFPNPLHGVTAEDALRALTGLFKADLEPERVAAIIIEPVLLRRALF"
BASE COUNT          243 a          417 c          381 g          197 t
ORIGIN      
        1 agatgatgaa gatggcgatg acatcgatcc tggcccgcgg aaacagcagc agatagccgc
       61 ccatcacccc cgcgatcgct cccgaagccc ccaccatcgg caccggcgag aagggcgcag
      121 cggcgatctg tcccgccgcc gccgccaggc cggccgcaag gtagaaggcc agaaagccgc
      181 gatggcccat ctggtcctcc agattgtccc cgaaaaccca caggaacagc atgttgccgc
      241 cgacatgcag caacccggca tgcaggaaca tgtgggtcaa cagaccccac agaagttgtc
      301 cgttcaccac cgccagcgga tacagcgcca gccgcgccca cagccattcc ccgcccggaa
      361 ccccgggcag cgtcatcaga tacatcacga tattcgccgc gatcagcgca taggtgacat
      421 agggtgtcct ctgcgaggga ttatggtcgc ggatcggaaa catcgtgcct cgcgggggcc
      481 ttggtccggc cctggtcggg gccatgttcg cccggtgcgc gggcggctgc aagctttccc
      541 tgtcgcggcg ctgcgcggcg cgctagacag gtgccggaca cgcctttccg gagagctttc
      601 atgaccagca tgaccgaccg caggaacgcc gccatctctc gtggtgtcgg catgaccaca
      661 cagatctatg ccgaacgggc cgaaaatgcc gagatctggg acaaggacgg caatcgctat
      721 atcgactttg ccgcgggcat cgcggtggtc aataccggcc atcgccatcc cagagtgatc
      781 gaggcggttc gtgcccaact ggaccgcttt acccatacct gccatcaggt cgtcccctac
      841 gagaattatg tcgcgctggc cgagaggctg aacagcctcg ttcccggcga tttcgacaag
      901 aagaccatct tcgccacgac cggcgccgaa gcggtcgaaa acgcggtcaa gatcgcgcgg
      961 caccatacgc agcggccggg gatcatcagc ttcgcgggcg ggtttcacgg gcgcaccttc
     1021 atgggtatgg cgctgaccgg aaaggttcag ccctacaagg ccggcttcgg gccgatgatg
     1081 cccgatatct ggcacctgcc ctttcccaac ccgctgcacg gagtcacggc cgaggatgcg
     1141 ctgcgcgccc tgaccggtct gttcaaggcc gatctggagc ccgagcgggt ggccgcgatc
     1201 atcatcgagc cggtgctgct gcggcgggcg ctgttcaa
//
LOCUS       DTVW01000261            3013 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1340735, whole
            genome shotgun sequence.
ACCESSION   DTVW01000261 DTVW01000000
VERSION     DTVW01000261.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3013)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3013)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3013
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1340735"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1683)
                     /gene="pnp"
                     /locus_tag="EYO87_03455"
     CDS             complement(<1..1683)
                     /gene="pnp"
                     /locus_tag="EYO87_03455"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_354198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HIC65049.1"
                     /translation="MFDDVKKSIQWGQDTLTLETGKVARQADGSVIATLGETSVMANV
                     TFAKEPKPGQDFFPLTVHYQEKYYAAGKVPGGFFKREARPTEKETLTARLIDRPCRPL
                     FAPGFKHEVLVMCTVLSHDLVNDPDIVAMIAASAALTISGVPFMGPIGAARVGFVDGE
                     YVLNPDVEDMQGLRGNPEQRLDLIVAGTKDAVMMVESEAYELTEDEMLGAVKFGHEAM
                     QPVIDLIVDLAEAAAKEPFDFQSPDYSALYARVKSLGEADMRAAYAIKDKSDRQDAVA
                     AVKAKVRDALSDEDLEDPNLGSALKKLESAILRGDIINGGARIDGRDTRTVRAIESEV
                     GFLPRTHGSALFTRGETQALVVTTLGTGDDEQIIDALHGNFRSNFLLHYNFPPYSVGE
                     VGRVSGPGRREIGHGKLAWRALQAVLPAATDFPYTIRVVSEITESNGSSSMASVCGGS
                     LSMMDAGVPLKAPVAGVAMGLILEDDGKYAVLTDILGDEDHLGDMDFKVAGTQAGITS
                     LQMDIKVAGITPEIMQQALAQAKDGRMHILSEMSKAISEAGSFSAHAPRIETM"
     gene            1917..2528
                     /locus_tag="EYO87_03460"
     CDS             1917..2528
                     /locus_tag="EYO87_03460"
                     /inference="COORDINATES: protein motif:HMM:PF03567.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65050.1"
                     /translation="MPIFQNAGKLLYFAHVPKCAGTSIENYLTRRFGPAALLDRRFVP
                     GRQRNWTSTSPQHVPAAQLERLFPEGFFDAGFAFVRDPLARATSAFHFHQSNRGKIDA
                     DLSLADWIRRIPGFKADMHDRYDGHFRSQSHIVPQWCRVFRLEDGFDEFIAWLDAWSA
                     STHGAGMAHTLAGRYEAGSLDKVTLGLFHNLYRDDYDRFGYDI"
     gene            2497..>3013
                     /locus_tag="EYO87_03465"
     CDS             2497..>3013
                     /locus_tag="EYO87_03465"
                     /inference="COORDINATES: protein motif:HMM:PF04577.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF563 domain-containing protein"
                     /protein_id="HIC65051.1"
                     /translation="MIMTDSAMISDSGKWPPPRCETGWSRTVLRLRNVVVDPSNAALY
                     HHGRHVPEGALYRNGSIYRGNAAQAPSAVNRTQGRHLWGGPLFSHFGHFLTESLSRLW
                     AVRDSGVQSIVFSPKDPGRKRQDRLPDHQDLLLKCLHIDLPVRIVHEPEEFEDLLIAG
                     PGFGLGPMAAGT"
BASE COUNT          519 a         1015 c          890 g          589 t
ORIGIN      
        1 catcgtctcg atccgcggcg cgtgggccga gaacgagccc gcttcgctga tcgccttgga
       61 catctcggac aggatatgca tccggccgtc cttcgcctga gccagcgcct gttgcatgat
      121 ctcgggggtg atgccggcaa ccttgatgtc catctgaagg ctggtgatcc cggcctgggt
      181 tcccgcgacc ttgaagtcca tgtcgcccag gtgatcctcg tcgcccagga tgtcggtcag
      241 gaccgcatat ttgccgtcat cttccagaat caggcccatc gcgacaccgg cgaccggcgc
      301 cttcagcggc acacccgcat ccatcatcga cagcgaaccg ccgcagaccg acgccatcga
      361 ggacgagccg ttggattcgg tgatctcgct gaccacccgg atcgtgtagg ggaaatccgt
      421 cgccgccggc agcaccgcct gcaacgcgcg ccaggccagt ttgccgtgcc cgatctcgcg
      481 ccggccgggg ccggacacgc gaccgacctc gccgaccgaa tagggcggga aattgtagtg
      541 cagcaggaaa ttgctgcgga aattgccatg cagggcgtcg atgatctgtt cgtcgtcgcc
      601 ggttcccagc gtggtcacca ccagcgcctg ggtttcgccg cgcgtgaaca gggccgagcc
      661 atgcgtccgc ggcaggaagc ccacttcgct ttcgatcgcg cgcaccgtcc tggtgtcgcg
      721 gccgtcgatc cgggcaccgc cattgatgat atcgccgcgc aggatggccg attccagctt
      781 tttcagcgcc gagcccagat tcggatcctc cagatcctca tccgacagag cgtccctgac
      841 cttcgccttg accgcagcaa ccgcgtcctg gcggtcggac ttgtccttga tcgcataggc
      901 cgcgcgcatg tcagcctcgc ccagcgactt cacgcgggca taaagcgcgc tgtaatcggg
      961 cgactggaag tcgaacggct ctttcgccgc ggcctcggcc agatcgacga tcaggtcgat
     1021 cacgggctgc atcgcctcgt ggccgaattt gaccgcaccc agcatctcgt cctcggtcag
     1081 ctcataggct tccgattcga ccatcatcac ggcgtccttg gtgcccgcca cgatcagatc
     1141 cagccgttgc tcggggttgc cgcgcagccc ctgcatgtcc tcgacgtccg ggttcagaac
     1201 atattcgcca tcgacgaacc cgacccgcgc ggcgccgatc gggcccatga acggaacgcc
     1261 cgagatcgtc agcgcggcac tggcggcgat catcgcgacg atgtcggggt cattgaccag
     1321 atcgtggctc agcacggtgc acatgaccag cacttcgtgc ttgaagcccg gcgcgaacag
     1381 cggtcggcag ggacggtcga tcagacgcgc ggtcagcgtc tctttctcgg tcgggcgcgc
     1441 ctcgcgcttg aagaaaccgc ccggcacctt gccggcggca tagtattttt cctggtagtg
     1501 gaccgtcagc gggaaaaagt cctgtcccgg cttcggttcc ttggcgaagg tcacattggc
     1561 catcacgctg gtctcgccca gggtggcgat cacgctgcca tcggcctgac gggcgacctt
     1621 gcccgtttcc agcgtcaggg tatcctgccc ccactggatc gatttcttca catcatcaaa
     1681 catctgattt cctcataggc acgccagccc tctggccgcg ccttgtccta tggcggcccc
     1741 attgccgccg tcccgatcct caggcgtcac cccggagccg ggtatcacgt cacagatttg
     1801 tggcacgtac aggaaaatac gcagaatgga aagatgtctg acgtcccgcc ccacagggcc
     1861 atcgcagcgt gcaggaacgg cttgacggcg cccgtccggc gatcagtatt actgcgatgc
     1921 cgatctttca gaatgccgga aagctgctgt attttgcgca tgttccgaaa tgcgcgggca
     1981 ccagcatcga aaattatctg acccggcggt ttggtccggc cgcgctgctg gatcgtcgct
     2041 tcgttccggg ccggcaacga aactggacca gcacctcgcc ccagcacgtg cccgcggcgc
     2101 aactggaacg tctgtttccc gaaggtttct tcgatgcggg tttcgccttc gtccgcgacc
     2161 ctcttgcccg cgccacgagc gcgtttcatt tccaccagtc caatcgcggc aagatcgacg
     2221 ccgatctgtc ccttgccgac tggatccggc gcattcccgg cttcaaagcc gacatgcatg
     2281 accgatatga cgggcatttc cgcagccaat cccacatcgt tccgcaatgg tgccgcgtct
     2341 tcaggctgga ggacggattc gacgaattca tcgcctggct ggacgcatgg tccgccagca
     2401 cgcatggtgc gggcatggct cacacccttg cgggacgata tgaagccggc agcctggaca
     2461 aggtgacgct cgggcttttc cacaatctct accgcgatga ttatgacaga ttcggctatg
     2521 atatctgatt cggggaaatg gccgccgccg cgctgcgaaa caggctggtc ccgcaccgtg
     2581 ctgcggttgc gcaatgtcgt cgtcgatccc tccaacgcgg cgctctatca tcatggccgc
     2641 cacgtgcccg agggcgccct ctatcgcaac ggctccatct atcgcgggaa cgcggcgcag
     2701 gctccttctg cggtgaacag gacacaggga cgccaccttt ggggcggtcc cctcttttcc
     2761 catttcgggc atttcctgac ggaatccctg tcccggctct gggccgttcg ggacagcggg
     2821 gtccagtcga tcgtcttctc gccaaaggat cccggcagaa agcgccagga ccgtctgccg
     2881 gaccatcaag acctgctgct gaaatgtctg catatcgatc tgcccgtccg catcgtccat
     2941 gagcctgaag aattcgagga tctgctgatc gcaggccccg gtttcggcct tgggccgatg
     3001 gcggcgggaa cgc
//
LOCUS       DTVW01000262            2060 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1341216, whole
            genome shotgun sequence.
ACCESSION   DTVW01000262 DTVW01000000
VERSION     DTVW01000262.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2060)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2060)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2060
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1341216"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..536)
                     /locus_tag="EYO87_03470"
     CDS             complement(<1..536)
                     /locus_tag="EYO87_03470"
                     /EC_number="1.6.5.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352580.1"
                     /note="part of NADH-ubiquinone oxidoreductase complex I;
                     shuttles electrons from NADH, via FMN and iron-sulfur
                     (Fe-S) centers, to quinones in the respiratory chain; NuoF
                     is part of the soluble NADH dehydrogenase fragment, which
                     represents the electron input part of NADH dehydrogenase;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit F"
                     /protein_id="HIC65052.1"
                     /translation="MLQDQDRIFTNLYGMGDLGLDAAKKRGNWDGTADLIGLGRDKIV
                     EIVKASGLRGRGGAGFPTGLKWSFMPKESDGRPAYLVINADESEPATCKDREIMRHDP
                     HTLIEGALIASFAMGAHACYIYIRGEYIREREALQAAIDECYDAGLLGRDAAGSDWDF
                     DLYLTHGAGAYICGEETAL"
     gene            complement(564..779)
                     /locus_tag="EYO87_03475"
     CDS             complement(564..779)
                     /locus_tag="EYO87_03475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009570864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65053.1"
                     /translation="MAGRPDRDTAQIRQAAVVIAVAMTAWIVVQWLGARYGWAARWAF
                     LADLAAIGAFVWSLIVTWRIWRRRNDS"
     gene            complement(779..1546)
                     /locus_tag="EYO87_03480"
     CDS             complement(779..1546)
                     /locus_tag="EYO87_03480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease"
                     /protein_id="HIC65054.1"
                     /translation="MADANCNRNCWIAGAGLGLLVWIFSAGIGSAGWLGGLFLGIIAG
                     VLLALLLIWALCHGHAAMDGSHWHPGSRPTRAADPVETPRPRGSESEAAMAFAGAATA
                     SPVPAAQPDHPAPQADPAPQADVAPSGEAQAGRGGPRPEPEKNDIHSSASDPARATDA
                     GAAATGPTDADPAAADDLKQIKGVGPKLEETLHEHGVTRFAQIAAWDEAEIDRFAEIL
                     GRMGTRIRSEDWVDQARVLASGGETEFSARVEKGDVY"
     gene            complement(1578..2042)
                     /locus_tag="EYO87_03485"
     CDS             complement(1578..2042)
                     /locus_tag="EYO87_03485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65055.1"
                     /translation="MDEAEVIVKRLKQAAEKARAQELARLEREAEEKRQASARKADGD
                     TAAPADAGRRPEGLDAPRDGSADDLKLIKGVGPKLEEMLNGMGFYHFDQIAAWGPEEL
                     AWVDANLEGFKGRAGRDDWTGQARALADDGETGSSRRAAQDGGRDGEESGKD"
BASE COUNT          314 a          732 c          646 g          368 t
ORIGIN      
        1 agcgccgttt cctcgccgca gatataggcg ccggcgccgt gggtcaggta gaggtcgaaa
       61 tcccaatccg aaccggccgc atcgcgcccc agcagccccg cgtcataaca ttcgtcgatc
      121 gccgcctgca gcgcctcgcg ctcgcggata tattccccgc ggatatagat atagcaggca
      181 tgggcgccca tcgcgaaact ggcgatcagc gcgccttcga tcagcgtgtg cggatcatgg
      241 cgcatgatct cgcggtcctt gcatgtcgcg ggttcggatt cgtcggcatt gatgaccaga
      301 taggcgggcc ggccatcgct ttccttgggc atgaaggacc atttgagacc ggtgggaaag
      361 cccgcgccgc cccgcccgcg aagccccgat gccttgacga tctcgacgat cttgtcgcgg
      421 cccagcccga tcagatcggc ggtgccgtcc cagttgccgc gctttttcgc ggcatcgagg
      481 cccagatcgc ccatgccata gagattggtg aaaatgcggt cctggtcttg cagcatcaga
      541 ctcttgttcc tctcatccac gggctaggag tcgttcctgc gccgccagat acgccaggtc
      601 acgatcagcg accagacaaa agcgccgatc gcggccagat cggccaggaa tgcccaccgc
      661 gccgcccagc catagcgcgc gcccagccat tgcacgacga tccaggcggt catcgccacc
      721 gcgatgacca cggccgcctg ccggatctgg gcggtgtcgc ggtccggccg tcccgccatc
      781 aatacacgtc acccttctcg acccgggcgg aaaattcggt ctcgccgccc gaggccagca
      841 ccctggcctg atcgacccag tcttcgctgc ggatccgcgt tcccatgcgg ccgaggatct
      901 cggcgaaacg gtcgatctcg gcctcgtccc aggcggcgat ctgcgcgaaa cgggtcacgc
      961 cgtgttcgtg cagcgtttcc tccagcttgg gtccgacgcc cttgatctgc ttcagatcat
     1021 ccgctgcggc aggatccgcg tccgtcggtc cggtggcggc cgcgccggca tcggttgccc
     1081 gtgccggatc gctggcggag gaatggatgt cgttcttctc gggctcgggc cgcgggccgc
     1141 cacggccggc ctgcgcctcg ccagagggcg cgacatcggc ttgcggcgca ggatcggcct
     1201 gcggcgcggg gtggtcgggc tgcgcggccg gaacgggtga cgcggtggcg gcgcccgcga
     1261 aggccatcgc cgcctcggat tcgctgccac gcggacgggg cgtctcgacc ggatcggcgg
     1321 cgcgggtggg ccgggaaccg ggatgccagt gcgaaccgtc catcgccgcg tgtccgtggc
     1381 acagcgccca gatcagcagc agcgccagaa gcacaccggc gatgatgccg agaaacaatc
     1441 cccccagcca gccggccgag ccgatgcccg cgctgaaaat ccagaccaga aggcccagcc
     1501 cggccccggc aatccaacaa tttctgttgc agttcgcatc cgccatgtgc ctgtccccgt
     1561 gtcagacccg tatcaggtca atccttgcct gactcctcgc cgtcccggcc tccgtcctgc
     1621 gcggcgcggc gcgacgatcc ggtctcgccg tcatcggcca gcgccctggc ctgtccggtc
     1681 cagtcgtcgc ggccggccct tcccttgaaa ccttccagat tggcatcgac ccaggccagt
     1741 tcctcgggac cccatgcggc gatctggtcg aaatggtaaa agcccattcc gttcagcatc
     1801 tcctccagct tcggcccgac ccccttgatc aatttcagat cgtcggcaga gccgtccctc
     1861 ggggcatcga gcccctcggg ccggcggccc gcatcggcgg gtgcggcggt gtcgccgtca
     1921 gccttgcggg cggaggcttg gcgtttttct tcggcttcgc gttcaagacg cgccagttct
     1981 tgggcgcggg ctttttcggc ggcctgtttc aggcgcttaa ctataacttc agcctcatcc
     2041 atcatcatct catcgaggtg
//
LOCUS       DTVW01000263            2920 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1341309, whole
            genome shotgun sequence.
ACCESSION   DTVW01000263 DTVW01000000
VERSION     DTVW01000263.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2920)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2920)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2920
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1341309"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..457)
                     /locus_tag="EYO87_03490"
     CDS             complement(<1..457)
                     /locus_tag="EYO87_03490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006938002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HIC65056.1"
                     /translation="MSVLNNAADVLRLFASGHTDLTVSEVTTQLAIPKANASRLLKAM
                     REAGMLETVGDTRRHRPGKLMLDVASAFKHASGLIRRASEVVAEVSARYGHTGYVSLR
                     VGREVTGVADFSGTNTLRVMGAVGRRLKAEESATGRSLLARMTDAEIAEL"
     gene            complement(635..1786)
                     /locus_tag="EYO87_03495"
     CDS             complement(635..1786)
                     /locus_tag="EYO87_03495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018431185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HIC65057.1"
                     /translation="MPPLDRIAEFADDLTAVRRDFHQHPELGFQEHRSSDRIAKMLEC
                     WGIEVTRHVGGTGVVGVLDGARPGRSIGLRADMDALPMDEQTNLPYRSQTPGVFHGCG
                     HDGHMTMLLGAARYLAETRNFAGRVVFIFQPAEEGLGGARTMLADGLFDRFPCDELYG
                     LHNSPYGSPSQVSIRPGRAQAGAAFFDITIRGRGSHGAMPNMSIDPVAIGAALVSDLQ
                     TIVSRNMDPLHAAVLSVTEFHAGSAYNVIPDEAVLRGTFRFFDKSDGDLIETRMRRLC
                     EGVALSHEARIDIDVRRVFDVLVNDPDRAADAISAARDIVGDLAQMDAEPTMGSEDMA
                     DLLRVVPGAFFNLGHAGGVPLHNPGFVFDDSILPVGASIFARIVETRGG"
     gene            complement(2017..>2920)
                     /locus_tag="EYO87_03500"
     CDS             complement(2017..>2920)
                     /locus_tag="EYO87_03500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008335981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65058.1"
                     /translation="AVIEDWAKAEGVHAARLARVAGRLGALDDRLLRGPEGWRHRLAL
                     IEAADLSWFAGDRVSSDRLALWISMRLSGAQDDPNALARVGWAVRRLTGGPGPEDDLA
                     AFLDRRDPENIEDSAERLKDRAGGWLEVMAAAADLHPITRACMGFHLWSLAGLGQHDD
                     QLEAAVTASRSAASDGGGAIFAPLAMGGAGGLRVSGSPPERLARWLDGMNSAILTAMR
                     HLDDTQTWSARAEGAMSQLSGRTPAALRSTLTEWPLVSAPMAEVLTGASRAAVQRNLA
                     WMEERDLIREVTQQGRFRMWRIKD"
BASE COUNT          581 a          991 c          822 g          526 t
ORIGIN      
        1 aaagctcggc aatctctgca tcggtcatcc gcgccagcag cgaccggcca gtcgcgcttt
       61 cctcggcctt caggcggcgc cccaccgcac ccatgacgcg cagcgtgttg gtgccggaga
      121 aatccgcaac gcccgtgacc tcacggccca cacgcagcga gacatacccg gtgtgcccgt
      181 accgcgccga aacctcggcc acgacctcgg acgcgcgccg gatcaggcct gaggcgtgtt
      241 tgaacgccga ggccacatcc agcatcagct tgccgggccg atgccgccgc gtgtcgccga
      301 cggtctcgag catgcccgcc tcgcgcatcg ctttcagcag gcgggacgca ttggctttcg
      361 ggatcgccaa ctgtgtcgtc acttccgaga cggtcagatc cgtgtgaccc gacgcgaaaa
      421 gtctcaggac atctgctgcg ttgttcaaga ccgacattgc gtcctttgtt ccattttatg
      481 gatcatgcat tccgttaatc gaaactagat ccagaaattc cctgtggtca agaggattcc
      541 tgtgccaacc aagggcgtgg gcgcgcgtct gcccgtccgg acagcggtaa ctgtcctgaa
      601 gagttcaaag tttcagcggt gaaaaaagtg tggctcagcc gccgcgcgtt tcgacgatcc
      661 gggcgaagat gcttgccccg accggcaaga tcgaatcgtc gaagacgaat cccggattgt
      721 gcaacggaac acctccggca tgcccgagat tgaaaaacgc acccggcaca acgcgcagca
      781 ggtcggccat atcctcggac cccatcgtcg gttcggcatc catctgagcc aggtcaccca
      841 cgatgtcccg cgcagcagaa atggcgtcgg cggcacggtc cggatcgttg accaacacgt
      901 cgaacacccg tcgcacgtca atgtcgatcc gggcttcatg cgacagggcg accccttcgc
      961 acagccgccg catccgggtt tcgatcagat cgccgtcgct cttgtcgaag aaccggaacg
     1021 tgccgcgcag caccgcctcg tccgggatca cgttataggc cgatccggcg tggaactcgg
     1081 tcaccgacag gacagcggcg tgcagcggat ccatgttgcg cgacacgatg gtctgaagat
     1141 ccgagaccag cgccgcgccg atggcgacgg ggtcgatgct catgttcggc attgcgccat
     1201 ggcttccgcg accccggatc gtgatgtcga agaacgccgc gcccgcctgc gcccgtccgg
     1261 gccggatgct cacttgcgag ggtgatccgt acggagaatt gtgcaaaccg tacaactcgt
     1321 cacaagggaa gcggtcgaac agcccgtccg caagcatcgt ccgcgctccg cccaaccctt
     1381 cctcagcggg ctggaagatg aacacgaccc ggcccgcgaa gttgcgcgtt tccgccagat
     1441 accttgccgc gcccagaagc atcgtcatgt gcccgtcatg cccgcaacca tggaacacgc
     1501 ccggagtctg cgaccggtaa ggcaggttgg tctgctcgtc catcggcagg gcgtccatat
     1561 cggcgcgcaa cccaatgctg cgccccggcc ttgcgccgtc aagaacgccg accacgcccg
     1621 tcccgcccac gtgacgggtg acctcgatcc cccagcattc gagcatcttc gctatccggt
     1681 ccgaactgcg gtgttcctga aagccaagtt cgggatgctg atgaaaatcc cgccgaacag
     1741 ccgtcaggtc atctgcaaat tcggcaattc tatcaagcgg tggcatttca gcctcatcgt
     1801 tgtgtcagct accgtctcga gtaaagttgc ctgattcatc caaagaagcc aaacgccgcg
     1861 agcatgccat tctcaatcgt ctcgatagga agcaatgtgc cagccgagta tgggtggcgg
     1921 cgcacggaac agatcaagaa cttcttgaag cgcaccgaat tgccagccac caatcaccga
     1981 tgaagggaag catcggtgcg aagcgtacac aacgacctag tccttgatcc gccacatcct
     2041 gaaccgtcct tgttgcgtca cttctcggat caggtctctc tcttccatcc aggcgaggtt
     2101 cctttgaacc gccgcgcgac ttgcgcctgt taagacctct gccatcgggg ccgacaccaa
     2161 aggccactct gtcaacgtcg aacgaagagc ggccggagtt cgccccgaaa gctgagacat
     2221 ggctccttcc gcccgagcac tccatgtctg ggtatcatct agatgacgca tcgccgttag
     2281 aattgcgctg ttcatcccat ccaaccagcg ggccaagcgt tcgggtggcg agcccgagac
     2341 acgcagcccc cctgccccgc ccatagcgag cggtgcgaat atggcgccgc ctccatcgct
     2401 ggccgcgctc ctggacgcgg tgacggcggc ttccaactgg tcgtcgtgct gcccaagacc
     2461 cgccaggctc cagagatgaa agcccatgca agctcgcgta attgggtgga gatcggctgc
     2521 ggctgccatg acttccagcc atccacccgc gcgatctttg agccgctcgg cactgtcttc
     2581 aatgttctcg ggatcgcggc gatccaggaa ggcggccaag tcatcctccg gtccgggacc
     2641 tcctgtcagg cgccgaacag cccatccaac tcttgccagg gcatttgggt catcctgtgc
     2701 acctgacaac cgcatcgata tccagagcgc cagacgatca gaactcaccc gatcccctgc
     2761 gaaccagcta aggtccgctg cctcgataag agcgaggcga tgccgccagc cttccgggcc
     2821 acgcagcagc ctgtcatcca gagcacccag gcgtccagcc actcttgcca gtcgcgcagc
     2881 gtgaacgcct tctgcctttg cccagtcttc gatgacggca
//
LOCUS       DTVW01000264            1022 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1342500, whole
            genome shotgun sequence.
ACCESSION   DTVW01000264 DTVW01000000
VERSION     DTVW01000264.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1022)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1022)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1022
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1342500"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>1022
                     /locus_tag="EYO87_03505"
     CDS             <1..>1022
                     /locus_tag="EYO87_03505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017997766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase"
                     /protein_id="HIC65059.1"
                     /translation="ALAAAGLRGSDFIKGWKRREDGLDVGLIDEASMLDERQFEDLRE
                     IFPVLILFGDPAQLAPVGQSGEMVFDRLAERQRLILNRVHRQEDDSPILDLAHALSDE
                     TLDFAGFERMVRDAAAVDDRVIWAERVESDLMARSPVLVWRNATRIRLIHAFRTAFGA
                     PGDALLPGEPLICDGLELPLKHRKKRIDLEARGLIKGAQVVYLGPGRKPGFSRLHMIG
                     AEDPRLSVASIVKIEMPEAEDPFIPFAAQMGAAFLHGAAVTIHKAQGSQWPDVQVFGP
                     DISAAAWSNRTEAGIALWKRLAYVAITRAQNRLFWITRARLARPSAPLGVDDLEVPIP
                     ALELGA"
BASE COUNT          154 a          338 c          362 g          168 t
ORIGIN      
        1 gcgctggcgg cggcggggct gcgcggatcg gatttcatca agggctggaa gcggcgcgag
       61 gacgggctgg atgtcggcct gatcgacgag gcctcgatgc tggacgaaag acagttcgag
      121 gatctgcgcg agatctttcc cgtcctgatc ctgttcggcg atccggccca gttggcgccc
      181 gtgggccagt cgggcgagat ggtgttcgat cgactggcgg agcgccagcg tctgatcctg
      241 aaccgcgtcc accggcagga agatgacagc ccgatcctgg atctggccca tgccctgtcc
      301 gacgaaacgc tggatttcgc ggggttcgag cggatggtcc gtgacgccgc cgcggtcgat
      361 gaccgcgtga tctgggccga acgtgtcgaa tcggacctga tggcacgcag cccggtcctg
      421 gtctggcgca acgccacccg gatccggctg atccatgcct tccgcaccgc gttcggcgca
      481 ccgggcgacg cgctgctgcc cggcgagccg ctgatatgcg acggcctgga actgccgctg
      541 aagcaccgca agaagcgcat cgaccttgaa gcgcgggggc tgatcaaggg cgcgcaggtg
      601 gtttatctgg ggccggggcg caagcccggc ttttcccgcc tgcacatgat cggcgccgag
      661 gatccgcgcc tgtccgtggc gagcatcgtc aagatcgaga tgcccgaggc cgaggatccc
      721 ttcattccct tcgccgccca gatgggcgcg gccttcctgc acggggcggc ggtgacgatc
      781 cacaaggcgc agggctcgca atggcccgat gtgcaggtct tcggccccga catcagcgcc
      841 gccgcctggt cgaaccggac cgaagccggg atcgcgctgt ggaagcgcct ggcctatgtt
      901 gccatcaccc gcgcccagaa ccgcctgttc tggatcacgc gcgcccggct ggcgcggccc
      961 tcggcgcctc tcggggtgga cgatctggag gttcccatcc cggcgctgga actgggcgcc
     1021 ga
//
LOCUS       DTVW01000265            5938 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1344294, whole
            genome shotgun sequence.
ACCESSION   DTVW01000265 DTVW01000000
VERSION     DTVW01000265.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 5938)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5938)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5938
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1344294"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1216
                     /locus_tag="EYO87_03510"
     CDS             <1..1216
                     /locus_tag="EYO87_03510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008551176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HIC65060.1"
                     /translation="RAREEGQVNLYYWGGNDNLNVWMDSVVAPAMAGEGITLNAVRIT
                     GTKDAVDLVLAEKNAGKMAGAGSVDAIWLNGENFSTLKRRDALFGAFARKLPNAEFIE
                     WDESDPRSLLNLRDFGVPTEGKEMPWSGEQYVCAVNADQVSEADRPRTFEALRTYLEG
                     NPGKFIYTKPPDYEGNTFVQSVVYAFNPDGNGAEPFQQSLDELGAEELARLIEPGMKF
                     LKNLQPLLLGGESGRPRYPEDAASLNGLFLNGEVNFNCKFGLYAVAVGLSTGTYPEAA
                     EQMIFPEGGMIKNKNYLAVPSNTPNPAAAMVFVNYMTSPEAQTSKLQFAGMPAGIDGW
                     KLSDEQAAALAEASPGTVGVTQEELDANVTPDTNATLVDVIEATWLEYIERDSQAPIA
                     DIVTRAAGNLSK"
     gene            1277..2182
                     /locus_tag="EYO87_03515"
     CDS             1277..2182
                     /locus_tag="EYO87_03515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008551185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HIC65061.1"
                     /translation="MNRHIRRRRSMRRERLFLALQMTPIMVVLFLLFGGALVLAIVQS
                     LGYAPWFGVNTFPDLSYFRALWSSPSFWQSLGLTMYYATVSTFLALVGGILLALALIK
                     TFPGKTLYKYLYKLPLMIPYTVGIALAVLMLGNGGVLSRFAALFGLIDDPGQFPQILK
                     THYGWGIIAVYVWKQLPFITLAIYAVLLGIGRETEEAAAILGAKRRTIFFRVTLPQIL
                     PGIVSSTLICFAFNVGAFEAPFILGGGFPDTLPVVAWRYFNDADYTLQLQGMATVVSI
                     GLIAGVILFGYLAAYRRFEKRMGRN"
     gene            2244..3044
                     /locus_tag="EYO87_03520"
     CDS             2244..3044
                     /locus_tag="EYO87_03520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014290292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HIC65062.1"
                     /translation="MIIVAGFVLGPFIPLIIQSLAFRWAWPDMLPGTWWLEQRGKSMM
                     PLAWDYVLSPYSRIWEATLNTVGIGLAVTVICLAISLPAARVLARERFRGKSAFEFFL
                     SMPLIVPEAAIGIALLMMFIRLDLAGSYFGIIIAHLIPTIPYMVRMLTAVYQGLGRDF
                     EEQAIILGASRWQVLRLVTLPMLLPSVVAGALFTFLVSTNIFLLTFFLGQGKIITLPT
                     LLFSKIAGGTLDASAAGITLIVTLPGIILLIISERFIKEEAFGKGFGN"
     gene            3057..4166
                     /locus_tag="EYO87_03525"
     CDS             3057..4166
                     /locus_tag="EYO87_03525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020028402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65063.1"
                     /translation="MTIPEQVLARFPRLDPDFVKARLQRPENPARVIIDTDTANEIDD
                     QYALAWALLSPDRLKLEGVTAEPYSFAHHREGMLRSVRILKRGGPGNAEEEKFMGGFA
                     GWAQRIVETGTDPESIKFVLPDEGAEQSYHEIIRVFGHCGVDPDGMVHRGSPAYLDDF
                     DSPLDTEAARFIIDRARAAPDEPLYILAMGALTNIASALLMAPDIINTIVVVWTASFP
                     SYAPFCNAPSLNLVQDRLSSRLLFDCGVPHVYLPGYHVGAQLRISLPEMERFVKGKGS
                     IGDYLHHLYTHNPLHEKYVITEPETKTWVLWDIINVAWLFDATYVSTHMTRSPVLDPE
                     LYWQHPAGRHPMLEAYDVNRDAIFEDFYRALERAP"
     gene            complement(4249..5031)
                     /locus_tag="EYO87_03530"
     CDS             complement(4249..5031)
                     /locus_tag="EYO87_03530"
                     /EC_number="4.2.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008887515.1"
                     /note="Catalyzes the reversible hydration of unsaturated
                     fatty acyl-CoA to beta-hydroxyacyl-CoA; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase"
                     /protein_id="HIC65064.1"
                     /translation="MADAAGKGDVHLRIDGPVAHVTFDRPAARNAMTFAMYARLGEVC
                     DQLEARDDLRAIVFRGAGGAFVAGTDISEFTAFDSGADGVAYEDRIDATLARLTHLPA
                     PTLAVIEGAAVGGGLAIAAACDLRIVTPEAKFGVPIARTVGNTLSAANIARLVRAFGD
                     GPVRRMLLLSEFLDGETVHRLGFSGACVLPDRIEAEADRQIRRLTEAAPLTVAACRDL
                     FGRLADAAPDDRDVIARIYGSRDFREGVGAFLAKRKPEWSGT"
     gene            complement(5024..>5938)
                     /locus_tag="EYO87_03535"
     CDS             complement(5024..>5938)
                     /locus_tag="EYO87_03535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009340177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HIC65065.1"
                     /translation="FLELAKTADVIVENYRPGVVKRLGIDYDTVAAINPGIIYASISG
                     FGQTGPWSQRPGFDLMAQAASGIMSITGHPDGPPAKSGGPLADIGCSLFTVYAILAAH
                     IGKQKTGEGQFIDASLYEAGLSFAVWDICDYWGTGIVPGRIGTANRMAAPYQAVRAKD
                     GHFVLGANNDRLYRRLCETMGREDLTDHPDYATNALRMKNRDALIADLETTLVTRTRQ
                     EWVQALLDAGIPAGPILDYAEALGNEHADARDMVMPINHPIEGEVRNIGFPVKLRGTP
                     QRVRRHPPLLDEHRAELLRELGIEVANG"
BASE COUNT         1027 a         1928 c         1875 g         1108 t
ORIGIN      
        1 ccgcgcccgc gaggaaggcc aagtcaacct gtattactgg ggcggcaacg acaatctgaa
       61 tgtctggatg gacagcgtcg tggccccggc gatggccggc gaaggcatca cgctgaacgc
      121 cgttcggatc accggcacca aggatgcggt cgatctggtt ctggccgaga agaacgccgg
      181 caagatggcc ggcgcgggca gcgtcgatgc gatctggctg aacggcgaga atttcagcac
      241 gctgaagcgt cgggacgcgc tgttcggcgc ctttgcccgg aaactgccga atgccgagtt
      301 catcgaatgg gacgaaagcg atccccggtc gctgttgaac ctgcgcgatt tcggcgttcc
      361 gaccgagggt aaggagatgc cctggtccgg cgaacaatat gtctgtgccg tcaacgccga
      421 ccaagtttcc gaggcagatc gcccccggac gttcgaggcg ctgcgcacct atcttgaggg
      481 caacccgggc aagttcatct ataccaagcc gccagattat gagggcaaca ctttcgttca
      541 atcggtggtc tatgcgttca accccgatgg taacggcgcc gagccattcc agcaatcgct
      601 tgacgaactg ggggccgagg aactggcgcg cctgatcgag cctggcatga aattcctcaa
      661 gaatcttcaa ccgctgctgc tgggcggcga aagcggccgg ccccggtatc ccgaggatgc
      721 ggcgtcgctg aacggattgt tcctgaacgg cgaagtcaac ttcaactgca agttcggcct
      781 ctatgccgtc gccgtcggcc tgtccaccgg cacctatccc gaagcggccg aacagatgat
      841 ctttcccgaa ggcgggatga tcaagaacaa gaactatctc gcggtgccca gcaacacgcc
      901 caacccggcg gcggcgatgg tcttcgtcaa ttacatgacc tcgcccgagg cgcagacctc
      961 gaagctgcaa ttcgcgggaa tgccggcggg catcgacggc tggaaactgt ccgatgaaca
     1021 ggccgcagcc ctggccgagg cgtcgcccgg caccgtgggc gtgacgcaag aggaactgga
     1081 cgcgaacgtg acgcccgata ccaatgccac cctggtcgat gtgatcgagg cgacctggct
     1141 ggaatatatc gaacgcgaca gccaggcacc gatcgccgat atcgtcaccc gcgccgccgg
     1201 caatctgtcg aagtgaccgc atgccgccgc cgggccattc ccggcggcgg cacgacatcc
     1261 cgatgcgagg gcgccgatga acaggcacat cagaagaagg cgcagcatgc ggcgtgaacg
     1321 gctgtttctt gccctgcaga tgacgccgat catggtggtc cttttcctgc tgttcggcgg
     1381 tgcgctggtt ctggcaatcg tgcagtcgct tggctatgcg ccctggttcg gcgtcaacac
     1441 ctttcccgac ctgtcttatt tccgggcgct gtggtcgtcg ccgtccttct ggcagtctct
     1501 ggggctgacc atgtattacg ccacggtgtc gacctttctt gcgctcgtgg gcggcatcct
     1561 tcttgcgctg gcgcttatca agacctttcc cggaaagacc ctctacaagt atctctacaa
     1621 gctgccgctg atgatcccct acacggtcgg gatcgcgctg gcggtgctga tgctcggcaa
     1681 tggcggcgtg ctgtcgcgct ttgcggcgct gttcgggctg atcgacgatc cgggccagtt
     1741 tccgcagatc ctcaagaccc attatggctg gggcatcatc gccgtctatg tctggaaaca
     1801 gctgcccttc atcacccttg cgatctatgc ggtgctgctt ggcatcggcc gcgaaaccga
     1861 agaggccgcg gcgatcctgg gtgcgaagcg acgcaccatc ttcttccggg tgaccctgcc
     1921 gcagatcctg cccggcatcg tgtcgtccac gctgatctgc tttgccttca acgtgggcgc
     1981 gttcgaggcg ccgttcatcc tgggcggcgg ctttcccgat acgcttccgg tggtggcctg
     2041 gcgctatttc aacgacgccg actatacgct gcagctgcag gggatggcga cggtggtgtc
     2101 gatcgggctg atcgccgggg tgatcctgtt cggctatctc gcggcgtatc gacggttcga
     2161 aaaacggatg ggacggaact gacatggccc gcagaagcac cgaaagcctg gcatctcgcc
     2221 tgtcgccgtt ccagaagttc tatctgatca tcgtcgccgg tttcgttctg ggccctttca
     2281 ttcccctgat catccagagc cttgccttcc ggtgggcctg gcccgacatg ctgcccggca
     2341 cctggtggct ggagcagcgc ggcaaatcca tgatgccgct ggcctgggat tatgtcctgt
     2401 cgccctacag ccgcatctgg gaagcaacgt tgaacaccgt gggcatcgga ctggccgtga
     2461 ccgtgatctg ccttgcgatc agcctgccgg cggcacgggt gctggcccgc gaacggttcc
     2521 gcggcaaaag cgcgttcgag ttcttcctgt cgatgccgct gatcgtgccc gaggccgcca
     2581 tcggcatcgc gctgctgatg atgttcatcc ggctggacct ggcgggcagc tatttcggca
     2641 tcatcatcgc gcacctgatt cccacgatcc cctacatggt ccgcatgctg accgccgtct
     2701 atcaggggct gggacgcgat ttcgaggaac aggcgatcat cctcggggcc agccgctggc
     2761 aggtgctgcg tcttgtgacg ctgccgatgc tgctgcccag cgtggtggcc ggggcgctgt
     2821 tcacctttct cgtctcgacc aacatcttcc tgctgacctt ctttctgggt cagggcaaga
     2881 tcatcaccct gccgacgctg ctgttctcga agatcgcggg cggcacgctg gatgcatcgg
     2941 cggcagggat caccctcatc gtcaccttgc cggggatcat ccttctgatc atctcggagc
     3001 gcttcatcaa ggaagaggcg ttcggcaagg ggttcggcaa ttaaggagcc cgtcacatga
     3061 ccatccccga acaggtgctt gcccgtttcc cgcggctgga ccccgatttc gtcaaggcgc
     3121 gcctgcaacg gccagagaat ccggcgcggg tgatcatcga caccgacacc gccaacgaga
     3181 tcgacgatca atatgcgctg gcctgggcgc tgttgtcgcc cgaccggctg aagctggagg
     3241 gcgtgaccgc cgaaccctat tccttcgcgc atcatcgcga gggcatgctg cgcagcgtcc
     3301 ggatcctgaa gcgcggcggg ccgggcaatg ccgaggaaga aaagttcatg ggcggcttcg
     3361 ccggctgggc gcaacgcatc gtcgagacag gcaccgaccc tgaatccatc aagttcgtgc
     3421 tgcccgacga gggcgccgaa caatcctatc acgagatcat ccgggtgttc ggccattgcg
     3481 gcgtcgatcc cgacggcatg gtccatcgcg gatcgccggc ctatctggac gatttcgaca
     3541 gcccgctgga caccgaggcg gcacgattca tcatcgaccg cgcacgtgcc gcacccgacg
     3601 agccgctgta tatccttgcg atgggcgcgc tgaccaacat tgcctcggcc ctgttgatgg
     3661 cgcccgacat catcaacacc atcgtcgtgg tctggacggc gtccttcccg tcctacgcgc
     3721 cgttctgcaa cgcaccgtcg ctgaacctcg tgcaggacag gctgtcctcg cggctgctgt
     3781 tcgattgtgg cgtgccgcat gtctatctgc cgggatacca tgtcggcgcg cagcttcgga
     3841 tatcactgcc cgagatggaa cggttcgtga agggcaaagg gtcgatcggc gactatctgc
     3901 accatcttta cacccacaac ccgctgcacg agaaatacgt catcaccgaa cccgagacga
     3961 agacttgggt tctgtgggac atcatcaatg tcgcatggct gttcgacgca acctacgtct
     4021 cgacgcacat gacccgttcg ccagtcctgg atcccgaact gtactggcag catcccgcgg
     4081 gtcgccaccc gatgctggaa gcctatgacg tcaaccgcga tgcgatcttc gaagacttct
     4141 acagggcgct tgagcgcgcg ccctgacgga tcgggatcct tcacggttcg gcgccgcgtc
     4201 cctggttgcg cgacgggcag caatttgcca ggttcaacgc ccggtgccct aggtcccgct
     4261 ccattccggt ttgcgcttgg ccagaaacgc gccgacgccc tcgcggaagt cgcggctgcc
     4321 atagatgcgc gcgatcacgt cgcggtcatc gggggcggca tcggccagcc ttccgaacag
     4381 gtcgcggcag gcggcgacgg tcagcggcgc ggcctcggtc agccggcgga tctggcggtc
     4441 ggcctcggcc tcgatccggt cgggcagcac gcaggcgccg gagaatccca gacggtggac
     4501 cgtctcgccg tccagaaact ccgacagcag cagcatccga cgcaccggac catcgccgaa
     4561 ggcacggaca agccgggcga tattggcggc cgacagcgtg ttgccgaccg tgcgggcgat
     4621 cggcacgccg aatttcgcct cgggcgtgac gatccgcaga tcgcaggcgg ctgcgatggc
     4681 cagcccgccg ccgacggccg cgccctcgat caccgccaag gtcggcgcgg gcagatgcgt
     4741 cagccgggcc agcgtggcat cgatccggtc ttcgtaggcg acgccgtccg cgccgctgtc
     4801 gaaggcggtg aattcggaaa tgtcggtgcc ggcgacaaag gccccgcccg cgccgcgaaa
     4861 gacgatggcg cgcagatcgt cgcgggcctc cagctggtcg cagacctcgc ccagccgcgc
     4921 atacattgcg aaggtcatcg cgttgcgggc ggcgggccgg tcaaaggtga catgcgcgac
     4981 cgggccatcg atgcgcagat ggacatcgcc ttttccggcg gcatcagcca ttggcgacct
     5041 cgatccccag ttcgcgcagc aattcggcgc ggtgttcgtc cagcagtggc ggatggcggc
     5101 gcacccgctg gggcgtgcca cgcagcttga ccggaaagcc gatattcctc acctcgcctt
     5161 cgatcgggtg gttgatcggc atgaccatgt cgcgcgcgtc ggcatgttcg ttgcccagag
     5221 cctcggcgta atcgaggatc gggccggcgg gaatccctgc atccagcagc gcctgcaccc
     5281 attcctggcg cgtgcgcgtc accaacgtcg tttccagatc cgcgatcagc gcatcgcggt
     5341 tcttcatccg cagcgcgttc gtcgcgtaat cggggtggtc cgtcagatcc tcgcggccca
     5401 tcgtctcgca gaggcggcga tacaggcggt cgttgttggc gcccagcacg aaatggccat
     5461 ccttggcgcg gaccgcctga tagggcgcgg ccatgcggtt ggcggtgccg atccgtccgg
     5521 ggacgatgcc ggtgccccag taatcgcaga tgtcccagac ggcaaaggac agcccggcct
     5581 cgtagagcga ggcgtcgatg aactgcccct cgcccgtctt ctgcttgccg atatgggcgg
     5641 cgaggatcgc gtagacggtg aacagcgaac agccgatatc ggccagcggc ccgcccgatt
     5701 tcgcgggcgg gccatcggga tggccggtga tcgacatgat cccggatgcc gcctgcgcca
     5761 tcaggtcgaa acccggccgc tgcgaccacg gcccggtctg cccgaagccc gagatgctgg
     5821 catagatgat gcccggattg atcgccgcca ccgtgtcgta atcgatgccc agcctcttca
     5881 cgacgccggg tcgataattc tcgacgatca cgtcggcggt cttggccagt tccagaaa
//
LOCUS       DTVW01000266            1287 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1345224, whole
            genome shotgun sequence.
ACCESSION   DTVW01000266 DTVW01000000
VERSION     DTVW01000266.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1287)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1287)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1287
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1345224"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            44..361
                     /locus_tag="EYO87_03540"
     CDS             44..361
                     /locus_tag="EYO87_03540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65066.1"
                     /translation="MSTQYASKRGGARDEFTDPTAFDAWAEGWRRSDPDPALMAHANP
                     RRIPRNHRIEAAIASAVAGDMAPFEHLFLAVTHPREDRADWADLARAPLPEQAVRQTF
                     CGT"
     gene            449..1129
                     /locus_tag="EYO87_03545"
     CDS             449..1129
                     /locus_tag="EYO87_03545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020040757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease"
                     /protein_id="HIC65067.1"
                     /translation="MKLASYNLHKCRGVTGPHAPERNLAVIAALRPDIIALQEVDFRF
                     GARPEALPRGLIRDATGLVAVEITGRTGEQSLGWHGQTILMRPDLAAAATVRRLPLPG
                     LEPRGAVAVRLPGLTVIGMHLGLARSSRRAQLQRITAQAARIAGDHVVMMGDFNEWRD
                     DRGLESLAGFRVIAPGPSYPAPLPRLALDRIAMSRHLHLLDSGVFAGARARDASDHLP
                     IWAEIALP"
     gene            1197..>1287
                     /locus_tag="EYO87_03550"
     CDS             1197..>1287
                     /locus_tag="EYO87_03550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011750294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enolase"
                     /protein_id="HIC65068.1"
                     /translation="MSAIIDIFAREILDSRGNPTVEVDVTLEDG"
BASE COUNT          191 a          448 c          448 g          200 t
ORIGIN      
        1 ccccgccgta tgaagagtcg cccgatcgcg tgatccggcc cgagtgagca cacagtacgc
       61 atcgaagcgt ggcggcgccc gcgacgaatt caccgatccg acggccttcg atgcctgggc
      121 agagggctgg cgaaggagcg atcccgaccc ggcgctgatg gcccatgcca atccgcggcg
      181 cattccgcgc aaccaccgga tcgaggcggc catcgcctcg gccgtggccg gcgacatggc
      241 gcccttcgaa catctcttcc tggccgtgac ccacccccgc gaggatcgcg ccgactgggc
      301 cgacctggcc cgggcgccgc tgccggaaca ggcagtcaga cagacttttt gcggaacctg
      361 atggcggcgg gggggcgttg ccccccatcc tcttgcagag gattcccccc aaggtatttt
      421 gaaagagtgc gaggggacgg gccgggtgct gaaactggca agctacaatc ttcacaagtg
      481 ccggggcgtg accggacccc acgcgcccga gcgcaatctg gcggtcatcg ccgcgctgcg
      541 gcccgacatc atcgccctgc aggaggtgga tttccgcttc ggtgcccgcc ccgaggcgct
      601 gccgcgcgga ttgatccgcg acgccacggg gctggtcgcg gtcgagatca ccggtcggac
      661 cggcgagcag tcgctgggct ggcatgggca gaccatcctc atgcgcccgg atcttgccgc
      721 ggccgcgacc gtccggcgtc tgcccctgcc ggggctggag ccgcgcggcg ccgtggcggt
      781 gcggctgccg gggttgacgg tgatcggaat gcatctgggt ctggcgcgat cctcgcgccg
      841 ggcccagttg cagcgcatca ccgcgcaggc ggcgcggatc gcgggtgatc atgtggtgat
      901 gatgggcgat ttcaacgaat ggcgcgacga tcgcggcctg gaatcgctgg ccggattccg
      961 ggtgatcgcg ccgggcccct cgtatcccgc ccccctgccc cggctggctc tggaccggat
     1021 cgccatgtca cggcacctgc acctgctgga cagcggcgtc ttcgcgggcg cacgggcgcg
     1081 cgacgcctcg gaccaccttc cgatctgggc cgagatcgcc ctgccctgac gaaagcggct
     1141 ttcggcctgc cgccttcgcg ggtatgcagg cgccgacaca gcaacggagg ggcttcatgt
     1201 ctgccatcat cgatatcttc gcccgcgaga tcctggacag ccgcggcaat ccgaccgtcg
     1261 aggtcgatgt gacgctggag gacggca
//
LOCUS       DTVW01000267            1522 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1346915, whole
            genome shotgun sequence.
ACCESSION   DTVW01000267 DTVW01000000
VERSION     DTVW01000267.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1522)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1522)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1522
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1346915"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1368)
                     /locus_tag="EYO87_03555"
     CDS             complement(<1..1368)
                     /locus_tag="EYO87_03555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011750358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing protein"
                     /protein_id="HIC65069.1"
                     /translation="MAGSASGLSWDRLARIRLPRQWRGFLTWSVLGLGAVLAVATMTV
                     LGPFSQGAASRMLRLILLLDLVYLIVLLGLVVLRMARLIAARRASAAGSRLHARLVAI
                     FAGLALVPTVLVALFAGFLVNIGLEGWFSGRVQQVVTTSQAAAEAYQEEHRRDLTEDA
                     RALAGVLTQAGRVNPMIEDAEMRQLLVQGQALIQRGLREAYIINGAGEIRARGERSYL
                     FWYEQPTAEDLDRAQRDGLVLLEDWKNNEFRALVALPPLVDRYLYVTRDVDGNLLGLL
                     DDTRATVGDYRQLEQTRGQVLFEFSLVYLGFALLLVAAAIWMGLWFASRLSRPIGALA
                     LASERVGRGDLDVQVPEPDTGDEIQTLGESFNRMTRQLKAQRQELVDSYRASDDQRRL
                     FDNVLTSVTSGVIGLDAAGEIDFVNRSATRLLGLDPGGDIDALLSEAVPEFAPMFDRL
                     SASVAE"
BASE COUNT          283 a          560 c          447 g          232 t
ORIGIN      
        1 ctcggccacc gatgccgaca accggtcgaa catcggcgcg aattccggca ccgcctcgga
       61 caagagcgcg tcgatgtcgc cgccgggatc cagccccagc aaccgcgtgg ccgagcggtt
      121 gacgaaatcg atctcgcccg ccgcgtccag tccgatcacc ccggaagtga ccgaagtcag
      181 cacattgtcg aaaagccgac gctgatcgtc gctggcccga tagctgtcca ccagttcctg
      241 ccgctgcgcc ttcaattgcc gggtcatgcg gttgaagctt tcgcccaggg tctggatctc
      301 gtcgccggta tcgggctcgg gcacctggac gtccagatcg ccgcgcccga cccgttcgct
      361 ggccagggcc agcgcgccga taggccgcga caggcggctg gcgaaccaca gccccatcca
      421 gatcgcggcc gcgaccagca gcagcgcgaa gcccagatag accagcgaga attcgaacag
      481 aacctgcccg cgcgtctgtt ccagttggcg gtaatcgccc accgtcgcgc gggtatcgtc
      541 aagcaatccc agaaggttgc cgtccacgtc ccgcgtgaca tagagatagc ggtcaaccag
      601 cggcggcagc gccaccagcg cgcggaattc gttgttcttc cagtcctcca gcagcaccag
      661 cccgtcgcgc tgcgcgcgat ccagatcctc cgccgtcggc tgttcgtacc agaacagata
      721 gctgcgttcg ccgcgcgcgc ggatctcgcc cgcgccgttg atgatatagg cctcgcgcag
      781 cccgcgctgg atcagggcct ggccctggac cagcaattgc cgcatctcgg catcctcgat
      841 catcggattg acacgtccgg cctgcgtcag caccccggcc agcgcgcgcg cgtcctcggt
      901 cagatcgcga cgatgttctt cctgataggc ctcggccgcg gcctgcgagg tcgtcaccac
      961 ctgctgcacc cgccccgaga accagccctc gagaccgata ttgaccagaa aacccgcgaa
     1021 cagcgcgacc agcaccgtcg gcaccagcgc cagacccgcg aagatcgcca ccagccgcgc
     1081 atgaagacgg gatcctgccg ccgaagcccg cctggccgcg atcagccgcg ccatgcgcag
     1141 cacgacaaga cccagaagaa cgatcagata gacaagatcc agcagcagga tcagccgcag
     1201 catccggctg gccgcgccct ggctgaatgg accaagcacg gtcatcgttg ccacggccag
     1261 caccgcgccc agcccgagaa cggaccaggt caggaaacca cgccattgcc gcggcaagcg
     1321 gatgcgcgcc aacctgtccc agctcagccc tgatgcggac cctgccataa cccccactcg
     1381 ccgtctctcg cggctttgct gttgccgggc cgtaactgcg gcgcggcacc ctgtggcggt
     1441 tttacatcag tttgcggcgc cgtgtcacct cgatattcaa ctcggtcagc ttcttgcgca
     1501 gcgtattgcg gttgatgccc ag
//
LOCUS       DTVW01000268            2881 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1347717, whole
            genome shotgun sequence.
ACCESSION   DTVW01000268 DTVW01000000
VERSION     DTVW01000268.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2881)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2881)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2881
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1347717"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1617)
                     /locus_tag="EYO87_03560"
     CDS             complement(<1..1617)
                     /locus_tag="EYO87_03560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014198248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-dependent synthetase"
                     /protein_id="HIC65070.1"
                     /translation="MSAAELPDFAWRVPRHFNIGEAVCDHWIGRDPGRVAIIEVDEDG
                     HSTRHSYRELGQRAARLSHVLARHGIALRRTDAPGDRVGVLLPQSIETAVAHVAVTRM
                     GGISLPLFTLFGPQALLHRMRDSGARAIVTDAARLELLAGIATDLPDLTLILCKGLPP
                     DAAAGFGKVAVLDLDDACAVMPDTYPAEPTLADDPAMIIYTSGTTGSPKGALHAHRVL
                     LGHLPGVEVSHNLMPQPGDRLWTPADWAWIGGLLDVLMPGLYHGIPVVACRFRKFTAR
                     AAFDLMRDHGVRNAFLPPTALKMMRLEPDAGRWNLTLRSVASGGEPLGAELLEWGRRV
                     FGTTINEFYGQTECNMTVSCCDAVEAAVPGAMGRAAPGHDVAVIDAATGNVLPDETEG
                     EIAVRWPDPVMFLRYWNNPRATEAKFLSAPSGRWLLTGDRGRRRADGRLHFVGRDDDV
                     ISSAGYRIGPAEIEDCLLRHPAVHLAGVVGQPDPIRGHIVAAFVTLTPGHVASADLAD
                     QISDHVRRHLAAYEYPRAVHFIDEMPMTTTG"
     gene            1757..2440
                     /locus_tag="EYO87_03565"
     CDS             1757..2440
                     /locus_tag="EYO87_03565"
                     /inference="COORDINATES: protein motif:HMM:PF00440.21"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HIC65071.1"
                     /translation="MRTIDRLPQVSAEDGKLRQRTIDQIRVAGLQLIYERGYEGMGLR
                     LLARKAGIGQSTLYGHFATKQDLLLDLICLHMDDLLTSLRRHVPEAGPPLPRFLAFVR
                     FHLAYHLRRHREVFICYSELRSLNPDNHARVTKLRGIYEHVLIGIIREGIETGIMRRA
                     DARVAAYGILSLLSGVTAWFDSDGPLSEVEVCDEYTRLALAAVTDPLGAVMSMGGTAL
                     SPDDGPIRD"
     gene            2629..2718
                     /locus_tag="EYO87_03570"
                     /pseudo
     CDS             2629..2718
                     /locus_tag="EYO87_03570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018000522.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type I-E CRISPR-associated endoribonuclease
                     Cas2"
BASE COUNT          520 a          942 c          919 g          500 t
ORIGIN      
        1 gccggtggtg gtcatcggca tctcgtcgat gaaatgaaca gcgcgcggat attcataggc
       61 cgccagatgc cgccgcacat ggtccgagat ctggtcggcc aggtcggcgc tggccacatg
      121 gcccggcgtc agcgtcacga acgccgccac gatgtgccct cggattgggt cgggctgccc
      181 caccacgccc gccagatgca cagcgggatg gcgcagcagg caatcctcga tctcggccgg
      241 gccaatccgg tagccggcgg acgagatcac gtcgtcgtcg cggccgacga agtgcagccg
      301 cccgtcggca cgccgcctgc cccggtcgcc ggtcagcagc cagcgtcccg atggcgcgct
      361 gagaaacttg gcctctgtcg cccggggatt gttccaatag cgaaggaaca tcaccgggtc
      421 aggccaacgc accgcgatct ctccctcggt ttcgtcgggc aagacgttgc cggtggccgc
      481 gtctatcacc gcgacgtcgt ggccgggcgc ggcacgaccc atcgcacccg ggaccgccgc
      541 ctcgaccgca tcgcagcacg aaaccgtcat gttgcattcg gtctggccgt agaattcatt
      601 gatcgtggtg ccaaagaccc gccggcccca ttccagcagt tcggcgccca gcggctcgcc
      661 tccgctggcg accgaccgca gcgtcaggtt ccaccttccg gcgtccggtt ccaggcgcat
      721 catcttcaac gcggtgggcg gaagaaatgc attgcgaacg ccgtgatcgc gcatcagatc
      781 gaaggccgcg cgggccgtga acttgcgaaa ccggcacgcg acgaccggaa tgccgtgata
      841 gagccctggc atcaggacat ccagcagacc cccgatccag gcccagtccg cgggcgtcca
      901 caagcggtcg ccgggctgcg gcatcaggtt gtggctgacc tcgactcccg gcagatgacc
      961 cagcagaacg cggtgtgcgt gcaaagcacc cttggggctg ccagtggtcc ccgaggtata
     1021 gatgatcatg gccggatcgt cggccagggt cggctcggcg ggataagtat cgggcatgac
     1081 ggcacaggca tcgtccagat caaggaccgc gacctttccg aaacccgcgg ccgcgtcagg
     1141 cggcaagccc ttgcacagga tcagcgtcag gtcgggcagg tcggtggcaa tgccggccag
     1201 aagttccaga cgcgcggcgt cggtgacgat tgcacgggcc ccggaatcgc gcatacgatg
     1261 caacagcgcc tggggaccga agagcgtgaa cagcggcaag gagatgccgc ccatccgggt
     1321 caccgcgaca tgagcgacgg cagtctcgat cgattgcggc aacagcacgc cgacccggtc
     1381 gccgggcgca tccgtccgtc gcagcgcgat accgtgcctc gccagaacat gcgacaggcg
     1441 ggctgcccgc tggccaagtt cgcgatagct gtgccgcgtg ctgtgaccat cctcgtcgac
     1501 ctcgatgatc gcgacccggc ccggatcgcg gccgatccag tgatcgcaga ccgcctcacc
     1561 gatgttgaaa tgccgtggca cccgccatgc gaagtccggc agttccgccg ccgacatcgc
     1621 ccgtccctgc aagactgatc tccctcccac cggtcatgtc cgcgccccac gcggcgatca
     1681 cttgatcgat ccgacgctag attgcggggc caattactgt caataaggaa gtcgggaggc
     1741 ggagggtcga tggaaaatgc gaacgattga tcgcctgccg caggtttcag ccgaggatgg
     1801 caagctgcgc cagcgcacaa ttgaccagat ccgcgtggcc ggcctgcaac tgatctatga
     1861 acgcggctac gaaggaatgg ggttgcggct tctggcacgg aaggcgggca tcgggcaaag
     1921 caccctctac ggccatttcg cgaccaagca ggatcttctg ctggatctga tctgcctgca
     1981 catggacgat ttgctgacca gcctgcgccg ccatgttccc gaggcaggtc cgccgcttcc
     2041 ccgtttcctg gccttcgtgc ggtttcatct ggcctatcat ctgcgccgtc atcgagaagt
     2101 cttcatctgc tattccgaat tgcgcagcct gaaccccgac aaccatgccc gcgtgacgaa
     2161 actgcgcggc atctatgaac atgtcctgat cggcatcatc cgcgaaggga tcgaaaccgg
     2221 catcatgcgg cgcgccgatg ctcgcgtcgc ggcctatggc atcctgtcgc tgctgtcagg
     2281 ggtgaccgcc tggttcgatt ccgatggccc gctgtctgaa gtcgaggtct gcgacgaata
     2341 tacccgtctg gcgcttgccg ccgtgaccga tccgctgggc gcggtcatgt ccatgggcgg
     2401 cacggctctg tcgccggacg atgggccgat ccgagactga tgacacgagc atcagacccc
     2461 gtcccgatgg cttttgtcgc aaactccggc gccgatcagg tgatgccttt gttttcggcc
     2521 ggttatgcgg ccagcgcggc gaattgggca aacgggcaca gtccgggcgt cagctgaccc
     2581 tagcggatca tggtcgcgac ctcgatacct tcgagtgctg ccgaggctca gggttccgat
     2641 ttccttacgc cgggccgcaa ccgcctgccc gtcgatttcg acgggttgaa gctggtatcc
     2701 ctttcccccc ggaaataggc tgcgcaaagg gtcggaaatg ccggtggatc cggggacatc
     2761 gtgaatatcg tttcctgaca aggagttctg agaagtctgt tccctgtacg tgcggggatg
     2821 aaccggagat cggaaagggg gcagggtggt gctggaagcg tcggacaaca tgcgcctctc
     2881 c
//
LOCUS       DTVW01000269            2025 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1347930, whole
            genome shotgun sequence.
ACCESSION   DTVW01000269 DTVW01000000
VERSION     DTVW01000269.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2025)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2025)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2025
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1347930"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            405..641
                     /locus_tag="EYO87_03575"
     CDS             405..641
                     /locus_tag="EYO87_03575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65072.1"
                     /translation="MTRKDKPSPLFGQFFKPTETLQDRTTAAAKLIIDEDRTRRDELS
                     AKLKEARLKRDEKRAAEAAAAAAPKKRASRKKSG"
     gene            complement(785..1348)
                     /locus_tag="EYO87_03580"
     CDS             complement(785..1348)
                     /locus_tag="EYO87_03580"
                     /EC_number="2.7.7.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014889798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin adenylyltransferase"
                     /protein_id="HIC65073.1"
                     /translation="MTDQRRTARIAILTVSDRAAAGEYPDKGGPGAEDWLRDVIISPV
                     EIARHIVPDGREGVASRLRELAEDGADLILVTGGTGPAPRDQTPEAVMDVAEREYPGF
                     GEEMRRASLREVPTAILSRQTAVSRDATLIITLPGKPSAIATCLNAVFAAVPYCLDLL
                     GAGRIETDPAKIDAFRPQAKSAASDPA"
     gene            complement(1416..1925)
                     /locus_tag="EYO87_03585"
     CDS             complement(1416..1925)
                     /locus_tag="EYO87_03585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007423243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="damage-inducible protein DinB"
                     /protein_id="HIC65074.1"
                     /translation="MPNAEYVHAMARYNLWQNDNLVSAATRIGPAARQRDRGAFFGSI
                     EKTFFHVCWADRIWMSRFTDLAAPAGGLAESTAFEGDWDDFRKARAASDQLILSWAAS
                     VDPDWFAGELSWFSGAAGRNMSRPKPLVVMQLFNHQTHHRGQIHAMLTAAGEKPGATD
                     IAFMPAEDP"
BASE COUNT          351 a          685 c          684 g          305 t
ORIGIN      
        1 ccggcctctc cgccgctgcg aaggcgctgc ggcggagagg ccggcgatgg tcatcagaag
       61 attgcgcgcg ctcatatact cggcagcgca gttcctttat agaggtatca gtcgggcggt
      121 tctgccgcgg cgtcacggcg cccggccgat aggcggcctc caggaccgtg accatgcgcg
      181 ccggatcatt gaccgggcgc gaaccgcggc ccgcaggccg ccggaacagg acaagcctgt
      241 cgatgccgga ggaaagccgg ccgcggggcc acgcagcaga tcggcgacag ggcagcaatc
      301 cgatccgcag ggacggaccc gccgaatcgc ggtccgccca gccccaaacg accgaaccgc
      361 ctctgccgcc cgatatgaaa cgccacattg tgaggaagat ccgagtgaca cgcaaagaca
      421 agccgagccc gctgttcggc caatttttca agccgaccga aacccttcag gaccgcacca
      481 cggcggcggc aaagctgatc atcgacgagg accgcacgcg ccgggacgaa ctgtccgcca
      541 agctgaagga agcacggttg aagcgcgacg aaaagcgcgc cgccgaggcc gcggcggcag
      601 ccgcgcccaa gaagcgcgcg tcccggaaga agtcgggctg ataccatcct gcgatgcccg
      661 gcccggagcc ccgcgccgct tcgcccgcaa ggcggtcgcc ggaacctttc gccctggcac
      721 gaacagcatc gcatcctccc gcccccgatt atagacgatt gtggccgagg ttgccggcgg
      781 ggcctcaggc ggggtctgac gcggcgcttt tcgcttgcgg cctgaacgca tcgatctttg
      841 ccgggtcggt ctcgatccgt cccgcgccca gcaggtcaag gcaatagggc acggccgcaa
      901 agaccgcatt gaggcaggtg gcgatggccg acggcttgcc gggaagcgtg atgatcagcg
      961 tggcatcgcg gctgaccgcc gtctggcgcg acaggatcgc ggtcggaacc tcgcgcaggc
     1021 tggcgcggcg catttcctcg ccgaagcccg gatattcgcg ttcggccacg tccatcaccg
     1081 cctcgggcgt ctggtcgcgc ggcgcggggc cggtgccgcc ggtgacgagg atcaggtccg
     1141 ccccgtcttc ggccagttcg cgcagcctgg acgccacgcc ctcgcgcccg tcgggaacta
     1201 tgtgccgggc gatctccacc ggcgagatga tgacatcgcg cagccagtct tccgcgccag
     1261 ggccgccctt gtcgggatat tcaccggctg ctgcacggtc gctgacggtc aggatggcga
     1321 tgcgggcggt ccgccgctgg tcggtcatgg caaggccctt tcggttgcgg catggtggtt
     1381 cccggaacag atcgccggaa atccggggaa gcgcgtcacg gatcctcggc gggcatgaag
     1441 gcgatatccg tggcaccggg cttttctccg gcggcggtca gcatggcgtg gatttgtccg
     1501 cggtgatggg tctggtggtt gaaaagctgc atcaccacaa gcggcttggg ccgggacatg
     1561 ttccggccgg ccgcgccgga gaaccaggaa agttcgccgg cgaaccagtc gggatcgacc
     1621 gacgcggccc aggacaggat caactggtcg gaggcggcgc gcgccttgcg aaaatcgtcc
     1681 caatcgccct cgaacgcggt cgactcggcc agaccgcccg cgggcgcggc cagatcggtg
     1741 aagcggctca tccagatgcg gtcggcccag cagacatgga aaaacgtctt ctcgatcgac
     1801 ccgaagaagg ccccgcggtc acgctgccgc gcggctggtc cgatccgcgt cgccgcgctg
     1861 accagattgt cgttctgcca cagattgtat cgcgccatcg catgcacata ttcggcattg
     1921 ggcattccag atctcctttc ccaaccgacc gcgggccgtc gtcacttcac ccgcgcgttg
     1981 cgattcgcca ccagtttcag ccgcagggcg ttcaggcgga tgaag
//
LOCUS       DTVW01000270            1272 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1349542, whole
            genome shotgun sequence.
ACCESSION   DTVW01000270 DTVW01000000
VERSION     DTVW01000270.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1272)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1272)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1272
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1349542"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..546)
                     /locus_tag="EYO87_03590"
     CDS             complement(<1..546)
                     /locus_tag="EYO87_03590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013301494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HIC65075.1"
                     /translation="MKDIDRNADGSGGYDLIVIGAGSAGFSAAITAAEAGRRVALVGH
                     GTIGGTCVNVGCVPSKAMIRAAEAVHGGAAAGRFPGIDPCAPRVDWTALVNGTADLVA
                     GMRQKKYADLLPQYDGVDYIEDGAALLTESGVVVGERTLTADRIVIATGSRSDSPDIP
                     GIETVEVLDSTGLLALPERPDS"
     gene            complement(682..1068)
                     /gene="merF"
                     /locus_tag="EYO87_03595"
     CDS             complement(682..1068)
                     /gene="merF"
                     /locus_tag="EYO87_03595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007803570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mercury resistance system transport protein
                     MerF"
                     /protein_id="HIC65076.1"
                     /translation="MTDHAENPDRLLKWGLGGALFAALCCFTPLLVVVVAGVGLSALT
                     GWLDYALFPLLFFCLAVVAQALWLRAGRPGPTPKRWATAIAALLSVLIIWIEFRFALR
                     ITLGAFAVVGIYAFFLNRMKSKGATQ"
BASE COUNT          255 a          418 c          400 g          199 t
ORIGIN      
        1 gctgtcaggg cgctctggca gggcaagcag gccagtgctg tcaagcacct cgaccgtttc
       61 gatacctgga atatcaggac tgtcggaccg cgaaccagtt gcgatgacga tccggtcggc
      121 ggtaagcgtc cgctctccga ccacaacccc ggattccgtc agcagtgccg ccccgtcctc
      181 gatgtaatcg acgccgtcgt actggggcag caggtcggca tattttttct gccgcatccc
      241 ggccaccaga tcggcggtgc cgttcaccag ggctgtccag tcgacccttg gcgcgcaagg
      301 atcgatgccc gggaaacggc cggctgcggc gccgccatga acggcctcgg ccgcgcggat
      361 catcgccttg gacggcacgc agccgacatt gacgcacgtc ccgccgatgg tgccgtggcc
      421 gaccaacgcc acgcgcctgc cagcctcggc cgcggtgatc gcggcggaaa agccggccga
      481 accggcgccg atgacaatca ggtcgtagcc gccgctgccg tcggcattcc tgtcgatatc
      541 cttcatgtca ccgtgcctct tgcaggtcgg ggtttttccg cttggcgacg atcagataga
      601 tgatcgcgcc gatggcgatg agcggtgtca gcattccaag tacgccaaaa aacatgccgg
      661 ctgccgtgca ggatcccatc atcattgagt tgctcctttg gatttcattc gattgaggaa
      721 gaaggcgtag atgccgacaa cagcaaaagc gcccaaagtg atccgcagcg cgaagcggaa
      781 ctcgatccag ataatgagca ccgacagcag agcggcaatc gccgtcgccc agcgcttcgg
      841 ggtaggcccc ggccgccctg cgcgcagcca gagcgcctga gccacgacgg cgaggcagaa
      901 gaacagcagc gggaacagcg catagtcgag ccagccggtc agggccgaca ggccgacgcc
      961 agcaacgacg acgacaagaa gtggtgtgaa acagcacagg gccgcaaaaa gtgcgccgcc
     1021 cagcccccat ttcagcaagc ggtcggggtt ctcggcgtga tcggtcaagt tgcagtcctt
     1081 ttgtgtggag tcgtcttggt ggaagaccgt cgtgcgccgg acctccggaa ttcgcgggcg
     1141 atgaggaaaa cgagcgccgc caggagtgcg acggctatcc agccgggccc cgacatccac
     1201 gcaccgaacc cgcctaatgt cgccgccaga agtgccgttc cgcccccgca gcacacgatc
     1261 acgaccgggg cc
//
LOCUS       DTVW01000271            4932 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1353300, whole
            genome shotgun sequence.
ACCESSION   DTVW01000271 DTVW01000000
VERSION     DTVW01000271.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 4932)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4932)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4932
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1353300"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..137)
                     /locus_tag="EYO87_03600"
     CDS             complement(<1..137)
                     /locus_tag="EYO87_03600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002719248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1127 domain-containing protein"
                     /protein_id="HIC65077.1"
                     /translation="MQENRARRAVYRQTVRELNALTARDHDDLGINRSMITRLAHEAA
                     WG"
     gene            554..1651
                     /locus_tag="EYO87_03605"
     CDS             554..1651
                     /locus_tag="EYO87_03605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HIC65078.1"
                     /translation="MPTDREVALAAIADIALPDGRTLGQADLIRAFAVERDTVRFVLE
                     VADAEAARALAPVEAEARRRLEALDGVAKAQIVMTAAASKGQPARSSGGGQDAPPSLQ
                     VGRHPTAQAGPQPIAGVKHIVAIGSGKGGVGKSTVSANLAVALARAGRKVGLLDADIY
                     GPSQPRMMGVSGRPASPDGQRIEPLRAHGVTVMSIGLMLREGEAVVWRGPMLMGAMQQ
                     MLQQVNWGELDVLLIDLPPGTGDVQLSLCQKASVSGAIIVSTPQDVALLDARRAIDMF
                     NKLKAPILGLIENMSTYICPNCGHEAHLFGHGGVAREAEMLGLPFLGEIPLELEVRLA
                     SDSGRPIALGEGAVSDAYARLADRLVQAGTA"
     gene            2276..2791
                     /locus_tag="EYO87_03610"
     CDS             2276..2791
                     /locus_tag="EYO87_03610"
                     /inference="COORDINATES: protein motif:HMM:PF02381.16"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division/cell wall cluster transcriptional
                     repressor MraZ"
                     /protein_id="HIC65079.1"
                     /translation="MARKFRGTDSVRIDGKGRMSIPARFRKVFDAGDPSFATSNTGRT
                     QLVAVYGPDWWNWLELYTIEAIEEIDQQIDRLTRGSNKRRWLEQLMNGQSVDLEIDRE
                     GRLVLPQKLREKLGFDNGVETTFASHGDYMKVYLPDSPPKDVEELEDFAASKGRGFDP
                     RVFLSETGEED"
     gene            2795..3763
                     /gene="rsmH"
                     /locus_tag="EYO87_03615"
     CDS             2795..3763
                     /gene="rsmH"
                     /locus_tag="EYO87_03615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011746928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1402)-N(4))-methyltransferase
                     RsmH"
                     /protein_id="HIC65080.1"
                     /translation="MGQPHVPVLLKPLIRAVAPVGGRWLDGTFGAGGYARGLLDAGAQ
                     EVIGVDRDPSVFRIAEGWAGQYGDRLRLVQGTFSDLDRLAAEPLDGVVLDLGVSSMQL
                     DQPERGFSFLRDGPLDMRMGGDGPSAADLLNESDEAVIADVLFHYGEERASRRIARAI
                     VASRPLGRTGQLAEIVASCLPRAKPGQSHPATRSFQAIRIWVNDEFRQLVEGLSAAER
                     ALKPEGYLAVVSFHSLEDRIVKRFMQARSNSAGGGSRHAPVSDTAPPAFRLPFRRAIG
                     PDPDEMAVNPRARSALLRVAIRTEAPAGEIGAGALAMPRLPAKGGA"
     gene            3763..4107
                     /locus_tag="EYO87_03620"
     CDS             3763..4107
                     /locus_tag="EYO87_03620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007254691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsL"
                     /protein_id="HIC65081.1"
                     /translation="MRSLTYLACVLTVMALAFWAYRENYRTQAAIDDMGKIRREIAGL
                     REDLGVLRAEWAYQNRPERLRQLVDLNFERLLLVPQEMGQVVELGHVDYPKPAAPVEE
                     PNVDPASEEQKP"
     gene            4104..>4932
                     /locus_tag="EYO87_03625"
     CDS             4104..>4932
                     /locus_tag="EYO87_03625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011746930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HIC65082.1"
                     /translation="MIRTPLRPLARILRARERGENPDEIEAENRRRRHEAIQDKARRR
                     AEGRLVLLAGCFVLAFGTVGARMAALANSQPSEPRAEVMSSQIMSQRADIVDRRGRVL
                     ATNLLTYSLYARPQDMIDPTRAAQGLTKVFPDLDLARLTKDFTGKRKFLWIKRKISPE
                     QMQAVHDLGEPGLLFGPREMRIYPNGNIASHILGGSRFGKEGVSSAEVLGVAGVEKAF
                     DGWLRDPSNEGAPLELSIDLTVQTALEEVLASGMKLMSAKGAAAILMEVKTGEIVAMA
                     "
BASE COUNT          852 a         1545 c         1671 g          864 t
ORIGIN      
        1 ccccaggccg cttcgtgggc caggcgggtg atcatcgacc ggttgatccc gaggtcgtcg
       61 tggtcacgcg ccgtcagggc gttcagttcg cgaacggtct gccgatagac ggcgcgacgg
      121 gcgcggtttt cctgcatccg ctgaaccgca ttcagcaggc gggtccgcag gccggtttcg
      181 gcaacgttct gagcctgagc gataacagcc atgatatttt cctttcacat ctctcgcggc
      241 ttgcacccga cccggatggt ccggtgcttt cgatgaccca aagatggccc ctatgctgcg
      301 gatgcacaat ggacggtttt caaatgctgc catgcagcga ccgcaaggct cggccaattt
      361 attcatgatt attaacgtca tgaagaagca gaaaattcga tctcaagttg acgtttgcga
      421 taacgctgca tcggcaaaaa ggtccattcc ttggtgggtt gcaggttctg cggacagatt
      481 gtcgcggggg tgcttgcccc ggtgtcggcg atgcttcatg gtcccggaaa acccagagca
      541 agagcctttc gccatgccga cagatcgcga agttgcccta gcggcaatcg ctgacatagc
      601 ccttccagac ggccgcacgc tgggccaggc ggacctgatc cgcgcctttg ctgtcgagcg
      661 cgataccgtg agattcgttc tcgaggtggc ggatgccgag gccgcacggg cgctggcccc
      721 ggtcgaggcc gaggcgcgcc ggcggctgga ggcgttggat ggcgtcgcga aggcgcagat
      781 cgtgatgacc gccgcggcgt ccaaagggca gccggcacgc agttccggcg gcggacagga
      841 cgcgccgcca tccttgcagg tcggacgcca ccccaccgca caggcggggc cgcagccgat
      901 cgcgggcgtc aagcacatcg tcgccatcgg atcgggcaag ggcggtgtcg gcaaatcgac
      961 ggtctcggcc aatctggccg tggccctggc gcgcgcgggc cgcaaggtcg ggttgctgga
     1021 tgccgacatc tatgggccct cgcagccgcg catgatgggc gtgtcaggcc ggcccgccag
     1081 ccccgatggg caacggatcg agcccttgcg cgcgcatggg gtcacggtga tgtccatcgg
     1141 cctgatgctg cgcgagggcg aggcggtcgt ctggcgcggc ccgatgctga tgggcgcgat
     1201 gcagcagatg ttgcagcagg tgaactgggg cgaactggac gtgctgctga tcgacctgcc
     1261 gcccggcaca ggcgacgtgc agttgagcct gtgtcagaaa gcctcggtca gcggggcgat
     1321 catcgtctcg acgccgcagg acgtggcctt gctggatgcg cgtcgcgcca tcgacatgtt
     1381 caacaagctc aaggcgccga tcctgggcct gatcgagaac atgtccacct atatctgtcc
     1441 caattgcggc cacgaggcgc atcttttcgg ccatggcggc gtggcccgcg aggccgagat
     1501 gctgggcctg ccctttctgg gagagattcc gctggaactg gaggttcgtc tggcgagcga
     1561 ttcgggccgg cccatcgcat tgggcgaggg tgcggtctct gatgcctatg cccggctggc
     1621 cgaccggctg gttcaggccg gaacagcctg aaagggcggc ccctgggaat gtccgggatc
     1681 gccccgcgaa aggggctggg actggatggg accgctccga atctccccct cccgcattcg
     1741 tgattcggcg tgattcccgc ggtcttttcc gtgaatcggc cctgccaatc ctgcccttgc
     1801 gcaaccgctt gatgcggttt ttgccctgat gtgggatttt ccgccacacc tcatcgatcg
     1861 ctagatatgg tgccggtttc gccgcttctt accagaagga gtgcgaatcg gagcgtggct
     1921 ttgccaaaag gctggaatag ctgtgtcccg tcgacaattt tctgcaatca tggggtgaag
     1981 aattccattg cttcccatga attcccatgt cacaacagga tcacgaagac gggcagtgaa
     2041 ggggcgtcaa gacccctcga ggcgaagcag gtttcataca ggcacccgtt ttccaaacaa
     2101 gaccgtccgc gcgtgcgagc agcacctccc ccaggtggcg cgcgacaggg cgggaaaccc
     2161 cgaaaagggg cccagtcgat gggaacgagg gcggcggatc gggcagtggc agcagcccga
     2221 tccgcccttt ctctgtcggg cggacggcac ggacggacag tgaggcggga cacgggtggc
     2281 gcgcaagttc agaggcaccg acagcgtcag gatcgacggg aaggggcgga tgtccatccc
     2341 ggcgcgcttt cgcaaggtgt tcgacgccgg agacccctcc tttgccacca gcaataccgg
     2401 ccgcacccaa ctggtcgcgg tctatggtcc ggactggtgg aactggcttg aactctacac
     2461 catcgaagcc atcgaagaaa tcgaccagca gatcgacaga ctgacccgcg gcagcaacaa
     2521 gcgccgctgg ctggagcaat tgatgaacgg ccagtcggtg gatttggaga tcgaccgaga
     2581 gggtcgcctc gtcctgcccc agaagctgcg cgagaaactg ggtttcgaca acggggtcga
     2641 gaccaccttc gcctcgcatg gcgactacat gaaggtctat ctgcccgatt cgccgccgaa
     2701 ggatgtcgag gaactggagg atttcgccgc ctcgaagggc cgcggattcg atccccgcgt
     2761 cttcctgtcg gaaaccggcg aggaggacta gccgatggga cagccgcatg ttccggtcct
     2821 gctgaagcca cttatccggg cggtcgcgcc ggtcggcgga cggtggctcg acggcacctt
     2881 cggcgcgggc ggctatgcgc gcggtctgct ggatgccggg gcgcaggagg tgatcggcgt
     2941 ggatcgcgac ccttccgtct ttcgcatcgc cgagggctgg gccgggcaat acggcgaccg
     3001 gctgcgcctg gttcagggca ccttttcgga tctggaccgc ctggccgctg agccgctgga
     3061 cggtgtcgtc ctggacctcg gggtcagttc gatgcagctg gatcagcccg aacgcggttt
     3121 ttccttcctg cgcgacgggc cgctggacat gcgcatgggc ggcgacggac cctcggccgc
     3181 cgatcttctg aacgaatcgg acgaggccgt gatcgccgat gtgctgttcc actatggcga
     3241 ggagcgcgcc tcgcgccgga tcgcgcgcgc catcgtcgcc tcgcgtccgc ttggccgcac
     3301 cgggcagctg gccgaaatcg tcgcatcctg cctgccgcgc gccaagccgg gccagagcca
     3361 cccggccacc cgaagctttc aggcgatccg gatctgggtg aacgacgaat tccggcaact
     3421 ggtcgagggc ctgtcggcgg ccgagcgcgc tttgaaaccg gaaggatacc tggccgtggt
     3481 cagttttcat tcgctggagg accggatcgt caagcgattc atgcaggcgc ggtcgaacag
     3541 cgccggcggc ggcagccgac acgcgccggt cagcgacacg gcgcctccgg ccttccggct
     3601 gccgttccgc cgcgccatcg gacccgaccc cgacgagatg gcggtcaatc cgcgcgcacg
     3661 ttcggcgctg ttgcgcgttg ccatccgcac cgaggcgccc gcgggcgaga tcggggcagg
     3721 ggcgcttgcg atgccgcgac ttcccgcgaa aggcggtgcc tgatgcggtc gctgacctat
     3781 cttgcctgcg tgctgaccgt catggccctg gccttctggg cctaccgcga aaactatcgc
     3841 acccaggccg cgatcgacga tatggggaaa atccggcgcg agattgccgg gctgcgcgag
     3901 gatctgggcg tcctgcgcgc cgaatgggcc tatcagaatc gccccgaaag gctgcgtcag
     3961 ctggtcgatc tgaatttcga gcgcctgctg ctggtgcctc aggaaatggg gcaggtcgtg
     4021 gaattgggtc atgtcgacta tcccaagccc gccgcgcctg tcgaagaacc gaacgtcgat
     4081 cccgcctccg aggagcaaaa gccatgatcc gaacccccct gcgccctttg gcccggatcc
     4141 ttcgcgcccg cgagcggggc gagaacccgg acgagatcga ggccgagaac cgtcgccgcc
     4201 gtcacgaggc gatccaggac aaggcccgca ggcgggccga gggacggctg gtccttctgg
     4261 ccggctgttt cgtgctggcc tttggcaccg tcggcgcgcg catggcggcg ctggccaaca
     4321 gccagcccag cgagccacgg gccgaggtca tgtcctcgca gatcatgtcg cagcgtgcgg
     4381 acatcgtcga tcggcgcggg cgggttctgg ccaccaatct gctgacctat tcgctttatg
     4441 cccgtccgca ggacatgatc gacccgaccc gcgcggccca ggggctgacg aaggtctttc
     4501 ccgatctgga tcttgcgcga ttgaccaagg atttcaccgg caaacgcaaa ttcctgtgga
     4561 tcaagcgcaa gatcagtccc gaacagatgc aggcggtcca tgatctgggc gaaccgggac
     4621 tgctgttcgg cccgcgcgag atgcggatct atcccaacgg aaacattgcc agccatatcc
     4681 tgggaggatc gcgatttggc aaggagggcg tcagcagcgc cgaggtgctg ggcgtggcgg
     4741 gcgtcgagaa ggcgttcgac ggctggctgc gcgatccatc gaacgagggc gcgccactgg
     4801 aattgtccat cgacctgacc gtgcagacgg cgctggagga ggttctggcc tcggggatga
     4861 aactgatgag cgccaagggc gccgccgcga tcctgatgga ggtcaagacc ggcgagatcg
     4921 tcgccatggc ca
//
LOCUS       DTVW01000272            1833 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1354756, whole
            genome shotgun sequence.
ACCESSION   DTVW01000272 DTVW01000000
VERSION     DTVW01000272.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1833)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1833)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1833
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1354756"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1668
                     /locus_tag="EYO87_03630"
     CDS             <1..1668
                     /locus_tag="EYO87_03630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010392894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease J"
                     /protein_id="HIC65083.1"
                     /translation="KWGHDPRSTPPGIHTEHSVHGYGAPGKERLILVDLGVTFGDMDS
                     SPGIDLIMPDLTWLEQNRDRLEAIFVTHGHEDHIGALGHLWSRLDVPIYARQFTGTLC
                     RLKLEEQGLPGEAVNITGPRPEVTQVGPFTVQFVPVSHSIPESAALIIDTPAGRIVHT
                     GDFKLDGTPVVGDSFDPILWHDVASEGQGIKVLTCDSTNVFSTHPGRSEALLANPILE
                     WVMAQKNMVVATTFASNIARLKTLSEAAIASGRKVCLLGRAMRRMVSVGLETGVLTDF
                     PDTIGPDEAANLSRDKVMLIVTGSQGERRAASAQLSRGRYLGLSLKDGDSFLFSSKTI
                     PGNERAVGRIMNALSESGVNVYDADDGLFHVSGHANRPDIEALHDLLKPEIVIPMHGE
                     HLHLREHMLLARDKGLGSTIAVNGTMLDLTGERPKVVDQVETGRLYLDGTVLIGAMDG
                     IVRDRIRMALNGHALVSVIVDEDDNALPDAWVELMGLPGRTRSGDDLARHIEGELADF
                     LEGADARVVRDDAKMDEALRKITRQVAMEEIGKKPEVTVIISRLMAD"
BASE COUNT          352 a          558 c          593 g          330 t
ORIGIN      
        1 aagtggggac atgatcctag atcgactcct cccggcatac atacggaaca cagtgtacac
       61 ggctatggtg cgccgggcaa ggaacggctg atccttgtcg atctcggggt gaccttcggc
      121 gatatggaca gcagtcccgg catcgacctg atcatgcccg atctgacctg gctcgaacag
      181 aaccgcgacc ggctggaggc gatcttcgtc acccacggcc acgaggatca catcggtgcc
      241 ctgggccatc tttggtcgcg tctggacgtg ccgatctacg cccgccagtt caccggcacg
      301 ctgtgccgcc tgaaactgga agagcaggga ctgccgggcg aggccgtgaa catcaccggc
      361 ccccgtcccg aagtcacgca ggtcggtccc ttcaccgtgc aattcgtgcc ggtcagccat
      421 tcgatccccg aaagcgcggc gctgatcatc gacacgccgg cgggacggat cgtgcatacc
      481 ggcgacttca agctggacgg cacaccggtc gtgggcgatt ccttcgatcc gatcctgtgg
      541 catgacgtcg ccagcgaggg gcaggggatc aaggttctga cctgcgattc gaccaatgtc
      601 ttctcgaccc atcccggccg gtccgaggcg ctgctggcca acccgatcct ggaatgggtg
      661 atggcgcaga agaacatggt ggtggccacg acatttgcca gcaacatcgc gcggctcaag
      721 accctgtccg aggccgcgat cgcgtcgggg cgaaaggtct gcctgctggg ccgggcgatg
      781 cggcgaatgg tttcggtcgg actggaaacc ggcgtcctga ccgattttcc cgatacgatc
      841 ggccccgacg aggccgcgaa cctgtcgcgc gacaaggtca tgctgatcgt taccggttca
      901 cagggcgaac gccgcgccgc cagcgcgcaa ttgtcgcgcg gccgctatct gggcctgtcg
      961 ctgaaagacg gtgacagctt cctgttcagt tcaaagacca ttccgggcaa tgaacgcgcc
     1021 gtcggccgga tcatgaacgc gctcagcgaa tcgggcgtca atgtctatga cgccgatgac
     1081 gggctgttcc atgtctcggg ccacgccaac cgccccgata tcgaggcgct gcacgatctg
     1141 ctgaagcccg agatcgtgat tccaatgcat ggcgagcatc tgcacctgcg cgaacacatg
     1201 ctgctggcgc gcgacaaggg ccttggctcg acgatcgcgg taaacggcac gatgctcgat
     1261 ctgacgggcg agcggccgaa agtggtcgat caggtcgaga cggggcggct ctatcttgac
     1321 ggcacggtgc tgatcggggc gatggacggg atcgtgcgcg accggatccg catggcgctg
     1381 aatggacatg ccctggtcag cgtcatcgtg gacgaggatg acaatgcgtt gcccgatgcc
     1441 tgggtcgaac tgatgggcct gcccggccgc acccgcagcg gcgacgatct ggcgcggcat
     1501 atcgagggcg aactggccga tttcctggaa ggcgccgacg cgcgcgtggt ccgcgacgat
     1561 gccaagatgg acgaggcatt gcgcaagatc acccgccagg tagcgatgga agagatcggc
     1621 aagaagcccg aagtaacggt catcatcagc cgcctcatgg ccgactgagc cgcgcgggcc
     1681 gctattgtgt aactattaat tctggcatgt aaccaattat tctagcgatt gatgtgcgaa
     1741 gacccatgaa tttctcgcgc ttatccgata tcgtcagggg ccgtcgcaag atgtgtcagc
     1801 ggcgtttctg cgcccaatgg tggacggtgg cgt
//
LOCUS       DTVW01000273            2942 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1355990, whole
            genome shotgun sequence.
ACCESSION   DTVW01000273 DTVW01000000
VERSION     DTVW01000273.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2942)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2942)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2942
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1355990"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..706
                     /locus_tag="EYO87_03635"
     CDS             <1..706
                     /locus_tag="EYO87_03635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012077157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="alkene reductase"
                     /protein_id="HIC65084.1"
                     /translation="SAIRPEGHVSLVRPQQEYVTPRALETDEIPAIVEAYRQGAQNAR
                     AAGFDGVEIHGANGYLIDQFLQDSTNRRTDRYGGSLENRTRFLEDVADAAIGVWGADR
                     VGLHLAPRADSHDMGDSDRSALFTRVADQMRQRGLAFLCLREHPAEDSLLDAIKAAFG
                     GPIIANEGLTRDSARSLVGQGRADAAAFGRDFIATPDLPRRFREGLPLNPQDPSTFYA
                     GGEKGYIDYLPAEAAA"
     regulatory      965..1078
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            1071..1679
                     /locus_tag="EYO87_03640"
     CDS             1071..1679
                     /locus_tag="EYO87_03640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007199360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HMP/thiamine-binding protein"
                     /protein_id="HIC65085.1"
                     /translation="MFTGAQISLYPMTDRFIDVITDALAALGPYRDRLRIETDDISTL
                     LVGPPEVLFPAIRDLFVAAAATRTHVVLHATLSRGCPGEPDDPMCRSDAMDTSREPLA
                     LRQAAAQEALRDAPETGETAAAQLSLYVMGGGDHMAEIYGCIEFLRDSGVFDRAKNFC
                     TRLGGDAGPVFAALAQAFCRFGPPEGHVTIDLTVSANSPSAA"
     gene            1684..2466
                     /locus_tag="EYO87_03645"
     CDS             1684..2466
                     /locus_tag="EYO87_03645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007007340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HIC65086.1"
                     /translation="MPKPTMRERVTRALPAILSVGTLIALWQIHVCLSGIPPSVLPSP
                     GRVAGQLAANRQVIWANTVPTIQATLLGFAVSLGAAFAFSVLIDFARPLRRALFPVFI
                     ISQTLPLVAIAPLVVLWFGFGLGPKIALVALVTFFPMLVALVDGYEATEPEIEQLLAT
                     MGASRATIFRRARLPSALPFFFAGLRISITYAVVAAIFAEYAGAARGLGIYILNAKNN
                     FRPDLVLAAVFVSAALTLVLFATTVLLQHLSMPWRQVEEQRP"
     gene            2463..>2942
                     /locus_tag="EYO87_03650"
     CDS             2463..>2942
                     /locus_tag="EYO87_03650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_004142164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HIC65087.1"
                     /translation="MSLLDIRDAAVRLGGTAVLDGVSLHVERGEFVSILGPSGAGKST
                     LFRLMTGGLAPDRGEILVSGRPLAAGNRPFAFMPQRDALMPWRRIIDNVTLGLEVQGL
                     PRREARARVAPLFAQFDLDGFERHWPAQLSGGMRQRAALLRTVVQQRPVMLLDEPFGA
                     "
BASE COUNT          429 a         1012 c          984 g          517 t
ORIGIN      
        1 aagcgcgatc cggcccgagg gccatgtcag cctggtgcgg ccgcagcagg aatatgtcac
       61 cccccgggca ctggagacgg atgaaatccc ggcgatcgtc gaagcctatc gccagggcgc
      121 gcagaacgcg agggcggcgg gcttcgatgg ggtcgagatt catggcgcga acggttatct
      181 catcgaccag ttcctgcaag acagcaccaa caggcggacc gaccgctatg gcggaagcct
      241 tgaaaaccgc acccgtttcc tggaggacgt ggcagatgcg gcaatcgggg tctggggcgc
      301 ggatcgggtg ggccttcacc ttgccccgcg cgccgattcg cacgacatgg gcgacagcga
      361 ccgcagcgcc ctgttcaccc gcgtcgccga ccagatgcgc cagcgcggcc tggccttcct
      421 gtgcctgcgc gaacatccgg ccgaagacag cctgctggac gccatcaagg ccgccttcgg
      481 tggtccgatc atcgccaatg aagggctgac ccgggacagc gcccgcagcc ttgtgggcca
      541 gggccgcgcc gatgcggcgg ctttcggacg cgatttcatc gccactccgg acttgccgcg
      601 ccggttccgc gagggactgc ccctgaaccc gcaggatccc tcgaccttct atgcgggcgg
      661 cgaaaagggc tatatcgact atctcccggc ggaagccgca gcgtaacgcg gaaacggccg
      721 gcgcgaggcg ccggccgcga cgccccggcc tcggcaggct tcattcatgg gccggatccc
      781 gcgctgcttg tgccctccgg tcattgccgg gcgcgaccgc aggattggcg atcccgcggc
      841 ggtcgcggca ggggcgacgc cgccttgacc ggcggcagcc tgatctggtc cgatgagcct
      901 tcgcgcgcgc cgcgatcggt ccgagcgaat cggttgcgcc cggctgcggt ctgtgatcac
      961 ttcaagccat ccacaggggt gccccgtatg gccggggctg agatgcgggc gcgacgcctg
     1021 cggaccctca aagctgatct gggtcatgcc agcggagcaa ggaggaacga atgttcaccg
     1081 gcgcacagat ttccctttac ccgatgacgg acaggttcat cgacgtcatc accgatgcgc
     1141 tggccgcgct tgggccctat cgcgaccggc tgcggatcga aaccgacgat atctccaccc
     1201 tgctggtcgg tccgccagag gtgctgtttc ccgcgatccg cgaccttttc gtcgccgccg
     1261 ccgccacgcg cacccatgtc gtcctgcacg caaccctgtc gcgcggctgc ccgggcgagc
     1321 ccgacgatcc gatgtgccgc agcgacgcga tggacacatc ccgcgagccc ctggccctgc
     1381 gccaggcggc agcgcaagag gccttgcgcg acgcccccga aaccggagaa accgcagccg
     1441 cgcagctttc gctctatgtc atgggcggcg gcgaccacat ggccgaaatc tatggctgca
     1501 tcgagtttct tcgcgacagc ggcgtcttcg atcgcgcaaa gaacttctgc acgcgactcg
     1561 ggggcgatgc cggtcccgtc ttcgccgcgc tcgcccaggc gttctgccgc ttcggtccgc
     1621 ccgaagggca tgtgaccatc gacctgaccg tgtcggccaa tagtccctcc gcggcctgat
     1681 ccgatgccca aacccacgat gcgcgagcgc gtcacgcgcg cgctgcccgc gatcctgtcg
     1741 gtcggcacgc tgatcgcgct gtggcagatc catgtctgcc tgtcggggat cccgccgagc
     1801 gtcctgccat cgcccggccg ggtcgccgga caactggcgg cgaaccgaca ggtgatctgg
     1861 gcgaatacgg tgccgacgat ccaggcgacg ctgctgggct ttgcggtctc gctgggcgcg
     1921 gcctttgcgt tctcggtcct gatcgatttc gcgcgtccgc tgcgccgggc gctgtttccg
     1981 gtcttcatca tcagccagac gctgccgctg gtggcgatcg cgccgcttgt cgtgctctgg
     2041 ttcggcttcg gccttggccc caagatcgcg ctggtcgcgc tggtcacgtt ctttccgatg
     2101 ctggtggcgc tggtcgatgg ctacgaggcg accgagcccg agatcgagca gcttctggcg
     2161 acgatgggcg cttcgcgggc gaccatcttt cgccgcgcgc ggttgccctc ggcactgccc
     2221 tttttcttcg ccggtctgcg catttcgatc acctatgccg tcgtcgcggc gatctttgcc
     2281 gaatatgccg gggcggcgcg cgggctgggc atctacatcc tgaatgccaa gaacaatttc
     2341 cgtcccgacc tcgttctggc ggcggtcttc gtcagcgccg ctctgacgct ggtcctgttc
     2401 gcgacgacgg tgctgctcca acacctgtca atgccctggc ggcaggtcga ggagcagcgg
     2461 ccatgagcct gctcgacatc cgcgacgccg cggttcggct gggcggaacg gcggttctgg
     2521 acggcgtgtc gctgcacgtg gagcgcggcg agttcgtttc gatcctcggt ccctcgggcg
     2581 cgggcaaatc gacgcttttc agactgatga ccggcggact tgcacccgat cgcggcgaaa
     2641 ttctggtctc cgggcgcccg ctggcagcgg gtaataggcc gtttgccttc atgccgcagc
     2701 gcgatgcgct gatgccgtgg cggcggatca tcgacaacgt gacgctgggg ctggaagtgc
     2761 agggcctgcc acggcgcgaa gcgcgcgccc gcgtcgcccc gcttttcgcg cagttcgacc
     2821 tggacggatt cgaacgtcac tggccggcac agctttcggg cgggatgcgc cagcgcgcag
     2881 cacttttgcg gaccgtcgtg cagcagcggc cggtgatgct gctggacgaa cccttcggcg
     2941 cg
//
LOCUS       DTVW01000274            1028 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1357281, whole
            genome shotgun sequence.
ACCESSION   DTVW01000274 DTVW01000000
VERSION     DTVW01000274.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1028)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1028)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1028
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1357281"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            24..932
                     /locus_tag="EYO87_03655"
     CDS             24..932
                     /locus_tag="EYO87_03655"
                     /inference="COORDINATES: protein motif:HMM:PF13692.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HIC65088.1"
                     /translation="MAPAAEPNRTVLEAAITNYAAQYCRNPPIAIIGGVFWWNVLSDS
                     LKARSIYDCMDYVAGFTSSSQPLIELEKSMIAEAPIAVSSSRALIETIQDSGRSGPVF
                     HIPNATDSAMFATSRPRWRPDGGRRLVIGYIGAIEDWFDADLVIALARRRPEWRFELT
                     GNVGPAHDELRSRKNRPANIECFGEVPFERLRESMARIDVGIIPFVDNALTRHTNPVK
                     VYEFLAAGRPVVSVPLGELEQFGDAVLPASGAAEFEAAIERAKNLLTESDCRKRQYLA
                     VPHTWEARAGLWNGVIQMAAIASGEA"
BASE COUNT          213 a          314 c          311 g          190 t
ORIGIN      
        1 agccccccca tccgcaaccc aatgtggccc cggcggcgga accgaaccgc acagtactgg
       61 aagccgcgat caccaactat gccgcgcaat attgccggaa tccgcccatc gcgattatcg
      121 gcggcgtgtt ctggtggaac gtcttgtccg acagcctgaa ggcgcgaagc atttacgatt
      181 gcatggacta tgtcgcgggg ttcacgtcct ccagccagcc cttgatcgaa ctggaaaaat
      241 caatgatcgc cgaggcgccg attgccgttt ccagttccag ggcgctgatc gaaaccatcc
      301 aggatagcgg ccggtccggg ccggtgttcc atatccccaa tgcgacggat tcggccatgt
      361 tcgcaacatc ccggccacgc tggcggcccg atggcggccg ccgcctggta atcggctata
      421 tcggcgccat cgaagactgg ttcgatgccg atctggtcat cgcactggcc aggcgccggc
      481 cggaatggcg cttcgagctg accggcaatg tcgggccggc ccatgacgaa ttgcggtcca
      541 ggaaaaatcg cccggccaac atcgaatgtt tcggggaagt gccgttcgag cgcctgcgcg
      601 aatcgatggc gcggatcgat gtcggcatca tcccctttgt cgataacgcg ctgacccggc
      661 acaccaatcc ggtgaaagta tacgaattcc tggccgccgg aaggcccgtg gtatcggtgc
      721 cgcttggcga actggaacaa ttcggcgacg ctgtattgcc ggcaagtggt gcggcggaat
      781 tcgaagccgc catcgagcgg gcgaaaaatc tattgaccga atcggattgc cgaaagcgcc
      841 aatatctggc cgtcccgcat acctgggaag cccgcgccgg gctgtggaac ggggtcattc
      901 aaatggcggc cattgcttca ggcgaagcat aaagccgatc agaaaccgac ttttatatcc
      961 agccagcgtt gcggcgtgat tgtcgcccga tcgccagggc ggaggattac agtcgtcgaa
     1021 tcagactc
//
LOCUS       DTVW01000275            1791 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1357395, whole
            genome shotgun sequence.
ACCESSION   DTVW01000275 DTVW01000000
VERSION     DTVW01000275.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1791)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1791)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1791
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1357395"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1459)
                     /locus_tag="EYO87_03660"
     CDS             complement(<1..1459)
                     /locus_tag="EYO87_03660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65089.1"
                     /translation="MRRIIHNTTAIAACLSLLAPQIAMAQAAKPDANSDQPAQSAQGE
                     QPAIVPEVDATAAQPCADGSAAPCGTEQPAANAGAEETAAPEQSAADEMPATDGSVDA
                     SGTVAPEAKAEAAAGQGDAGGSTAAPAAPADATMAEDPAAAPEAPAADPAMTDTADPA
                     ASEETTATGDAATGEDALADALAKESDQSGSVKAQDTEATLTGETTGGAKASGEATTT
                     SGDMTATGEAQSSGAAEADAAAQQPDATETNAAGAEVTTDQKAETDAREPAKAADSEG
                     ADPASDEDALAKALAEESDKTTEADKPADSGAGSGAPEAEASADTKAATEAETTTTTD
                     ASGQEAAVPEQDVTETEAAREAAATTEAPTAAALDENAADAEVTEEKVTEDNSRSSSE
                     DFTTNLRDALNSTTGQQNAAQDSNGGDDGKNDLAKALLLGLGGVAVGAMLNNNRQVAL
                     SAPDRVVVTRSDGSQQVIKDEVALLRQPGSTVSTEN"
BASE COUNT          207 a          596 c          616 g          372 t
ORIGIN      
        1 aattctcggt gctgacggtc gagcccggct gacgcagcag cgcaacttcg tccttgatga
       61 cctgctggct gccatccgac cgggtcacga caacgcgatc cggcgcgctc agcgcgacct
      121 ggcggttgtt gttcagcatc gcgccgacgg cgacgccgcc cagacccaga agcagggcct
      181 tggccagatc gttcttgccg tcgtcaccgc cattcgaatc ctgcgccgcg ttctgctgac
      241 cggtcgtgga gttcagggca tcgcgcagat tcgtcgtgaa atcctcggac gaggaccggc
      301 tgttgtcttc ggtcaccttt tcttcggtca cctcggcatc ggccgcattc tcgtccagag
      361 cggcggctgt cggcgcttcg gtcgtcgccg cagcctccct cgcggcttcg gtttcggtca
      421 cgtcctgttc cgggacggcc gcctcttggc cggaggcatc cgtggtggtg gttgtctcgg
      481 cctcggtggc agccttggtg tcggccgatg cttcggcttc gggggcgcct gatccggcgc
      541 cgctgtcggc gggcttatcc gcttcagtcg tcttgtccga ttcctcggcc agggccttgg
      601 ccagcgcgtc ttcgtcgctg gccggatcgg cgccctcgct gtcggcggcc ttggcaggct
      661 cgcgggcgtc ggtttcggcc ttctggtccg tggtcacctc ggcaccggcc gcattggttt
      721 cggtcgcgtc cggttgctgc gcggcggcgt cagcttccgc tgcgccagag gattgcgcct
      781 cgccggtcgc cgtcatgtcg ccggaggtcg tcgtcgcttc accggatgcc tttgcgccgc
      841 cggtcgtctc accggtcaac gtcgcctcgg tgtcctgcgc cttgaccgaa ccggattgat
      901 ccgattcctt ggccaatgcg tccgcaaggg catcctcgcc cgtcgcggcg tccccggttg
      961 cggtggtttc ttccgaggcc gcgggatctg ccgtatccgt cattgcgggg tccgctgccg
     1021 gcgcctctgg cgcggcggcg gggtcttcgg ccattgtcgc atcggccggt gcggccggcg
     1081 cggccgtaga gcctccggca tccccctgcc ctgccgctgc ctcagccttg gcttcaggcg
     1141 caacggtgcc cgacgcatcg acagagccgt ccgttgccgg catctcgtcg gcggcggatt
     1201 gttctggagc ggccgtttct tcggcaccgg cattggctgc gggctgttcg gtgccacagg
     1261 gtgccgcact gccgtcggca cagggctggg ccgctgtggc atcgacctcg ggcacgattg
     1321 cgggctgttc gccctgggcg ctctgcgcgg gctggtcgga attggcatca ggcttggccg
     1381 cctgggccat ggcaatctgc ggcgccagca gagacaggca ggccgcgatt gcggtggtgt
     1441 tgtgaatgat gcggcgcatg ggtgctcctt cattgccgtt tggcgattgt tcgagcgaca
     1501 aacagtcgca gtggaccgtc agttccaaac aagcgcgtga tcaccgcgtc gcgacgccgc
     1561 cgaaaacggg tctgaaggtc gggcttcttt cgcctggcgg gctggaattc ccgttcgctg
     1621 caaagacgtt ggcgcacgac gcgcgtcggc agcaggcaat ccgcaatgcg tcatggatgg
     1681 cccgtgagct cgctgcctgc caatcaaggg cagatccgtc acctgcgggc gaggcaggct
     1741 ggcgcgtcgc gatgcggaaa aactggtcgg agcgagagga ttcgaacctc c
//
LOCUS       DTVW01000276            2196 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1357537, whole
            genome shotgun sequence.
ACCESSION   DTVW01000276 DTVW01000000
VERSION     DTVW01000276.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2196)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2196)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2196
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1357537"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..504)
                     /locus_tag="EYO87_03665"
     CDS             complement(<1..504)
                     /locus_tag="EYO87_03665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010393335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase XerC"
                     /protein_id="HIC65090.1"
                     /translation="MTAAPGPLALAPAMAAALARWLETEAATRDRSDHTIRAYRADLL
                     AFLAFLGGHQGAPATPKSLAALRQTDMRAFAAAERARGLGPRSLARRQSAVRSFLRWI
                     SDREGFDLSPALSSRSPKYARSLPRPLSPAEARDALEVVADGHGSPWVAARDVAVMTL
                     LWGCGLRI"
     gene            complement(501..1214)
                     /locus_tag="EYO87_03670"
     CDS             complement(501..1214)
                     /locus_tag="EYO87_03670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF484 family protein"
                     /protein_id="HIC65091.1"
                     /translation="MSVESTAEAQQDPGLDPETRDRLLADPGILLADRDLMRALVAAR
                     ESEIGENVIDIRGRAMEALETRLDRLESQHENVIAAAYDNQSGTAVVHRAVVGLMESA
                     DLTELVDSLQADIAPLLRVETLRLVVEEEPEIAHLPEDVVIAPEGALGRIVTAGRRVP
                     RGDDIVLRPASPITRPIHGRDVASEALLPLDLGARRPRAMLVMGSADPARFMPAQGTD
                     LLRFFGQVFRLILLGRLKS"
     gene            complement(1248..1901)
                     /gene="fsa"
                     /locus_tag="EYO87_03675"
     CDS             complement(1248..1901)
                     /gene="fsa"
                     /locus_tag="EYO87_03675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005795071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructose-6-phosphate aldolase"
                     /protein_id="HIC65092.1"
                     /translation="MKFFVDTADVDAIRELNELGVLDGVTTNPSLILKAGRNIEEVTR
                     EICDIVDGPVSAEVVAEKAEDMIREGKHLAKIADNIAVKVPLTWDGLKACKALSSEGQ
                     MVNVTLCFSPAQAILAAKAGATFISPFIGRLDDIHLDGVDLIADIREIYDNYGYETQI
                     LAASIRSVNHIIEVAKIGSDVITAPPAVIKAMAKHVLTDKGLEQFTADWEKTGQKIG"
BASE COUNT          346 a          759 c          739 g          352 t
ORIGIN      
        1 aatccgcaat ccgcaacccc agagcaacgt catcaccgcc acgtcgcggg ccgcgaccca
       61 ggggctgcca tgcccgtcgg ccacgacttc cagcgcgtcc cgcgcctcgg ccggcgacag
      121 cggccggggc agcgaccggg cgtatttcgg gctgcggctg gacagcgcgg gcgacaggtc
      181 gaacccctcg cgatccgaga tccagcgcag aaaactgcgc accgccgatt gccgccgcgc
      241 aagcgaccgt gggcccagtc cccgcgcccg ttcggcggcg gcaaaggccc gcatgtcggt
      301 ctgtcgcagc gcggccagcg atttcggcgt ggcgggcgcg ccctgatggc cacccaggaa
      361 ggccaggaag gccagcaggt cggcacgata ggcccggatc gtatgatcgg agcggtcgcg
      421 cgtcgcggcc tcggtttcca gccagcgcgc cagggccgcc gccatggcgg gggcaagggc
      481 cagcgggccg ggcgccgcgg tcacgatttc aggcggccca gcaggatcag ccggaacacc
      541 tgcccgaaaa agcgcagcag gtcggtgccc tgcgcgggca tgaagcgcgc cggatcggcg
      601 ctgcccatga ccagcatcgc ccgcggccgc cgcgcgccca gatccagcgg cagcagcgcc
      661 tcggacgcca cgtcgcggcc atggatcggg cgggtgatgg gcgaggccgg tcgcagcacg
      721 atgtcgtcgc cgcgcggcac ccgccttccc gcagtgacga tccggcccaa cgcgccttcg
      781 ggggcgatca ccacatcctc gggcagatgc gcgatctcgg gttcttcctc gaccaccagc
      841 cgcagggttt cgacccgcag cagcggcgcg atatcggcct ggagactgtc caccagctcg
      901 gtcagatcgg ccgattccat cagcccgacc acggcgcgat gaacgaccgc cgtgcccgac
      961 tggttgtcat aggcggcggc gatgacgttc tcgtgctgcg actcgagccg gtccagccgg
     1021 gtctccagcg cctccatcgc acggccgcga atgtcgatca cgttctcgcc gatctcggat
     1081 tcgcgggcgg cgaccagcgc ccgcatcagg tcgcgatcgg ccagcaggat tcccggatcg
     1141 gccagcaacc ggtctcgggt ttccggatcc agacccggat cctgctgtgc ctcggcggtc
     1201 gattcgacgc tcattctgcc cctttccgcc gccttgccgc ggctgtttca gccgatcttc
     1261 tgaccggtct tttcccaatc ggcagtgaac tgctccagcc ccttgtcggt caagacgtgc
     1321 ttggccatcg ccttgataac ggccggaggt gcggtaatca cgtcactgcc gatcttggcg
     1381 acctcgatga tgtgattgac cgaacggatc gaggcggcga ggatctgcgt ctcgtagccg
     1441 taattgtcat aaatctcgcg gatatcggcg atcaggtcca cgccatccag gtgaatgtcg
     1501 tccagccgcc cgatgaacgg gctgatgaag gttgccccgg cctttgccgc caggatcgcc
     1561 tgggcggggc tgaagcacag ggtgacgttg accatctggc cttcgctgga cagcgccttg
     1621 caggccttca gcccgtccca ggtcagcggc accttgacgg cgatgttgtc ggcgatcttg
     1681 gccaggtgct tgccctcgcg gatcatgtcc tcggccttct cggcgacgac ctcggcgctg
     1741 acgggtccgt ccacgatatc gcaaatctcg cgggtgacct cttcgatgtt gcggccggcc
     1801 ttcaggatca gcgagggatt ggtggtgacg ccgtccagca cacccaactc attcaactcc
     1861 ctgatggcat ccacatcggc ggtatcgaca aagaatttca tggcccggct cctctgatag
     1921 gctacgggcc gggtgatagc gcaaaagccg tggcccggaa aggggcggcg ggccgcgccc
     1981 gggaatggcg cgaagggctg cggccgtccg cgggcgggcg cagccatgat cgtgtcaggc
     2041 catgcatgat ccgggcatgc cttgcatgcg atgtcacgcg catggcggcg tccgggcgcc
     2101 ggtcccatgg ggcggatggg cgcggccggg gcggggctga tacattgcgg gccgaccgca
     2161 agccctggac ggtcgagaac cccttgcaac ctgcat
//
LOCUS       DTVW01000277            3325 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1357783, whole
            genome shotgun sequence.
ACCESSION   DTVW01000277 DTVW01000000
VERSION     DTVW01000277.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3325)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3325)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3325
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1357783"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..853)
                     /locus_tag="EYO87_03680"
     CDS             complement(<1..853)
                     /locus_tag="EYO87_03680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011750270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein RodA"
                     /protein_id="HIC65093.1"
                     /translation="MSYLDYQVLQTPTGWRKLLYLNWPLILLITAVAGIGFLMLVSVA
                     GGDVDRWAKPQMYRFAAGMVIMIGLGFVPMWFWRGISVAAYIGCFLLLVGVEVAGEVG
                     MGARRWIDFGPIRVQPSELMKIALVLLLAAYYDWLPLNRVSRPLWVLLPVVLILAPTG
                     LVIIQPDLGTSIMLVAGGGIVMFAAGVSLWYFGAVIGMAVGLVATVLESRGTDWQLLK
                     DYQFRRIDTFLDPAADPLGAGYNIIQSQIALGSGGWSGRGFMQGTQSRLNFLPEKHTD
                     FIFTVLAE"
     gene            complement(869..2815)
                     /gene="mrdA"
                     /locus_tag="EYO87_03685"
     CDS             complement(869..2815)
                     /gene="mrdA"
                     /locus_tag="EYO87_03685"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011750269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HIC65094.1"
                     /translation="MKKTERQIVDSARLIGRRGLLLGTVQLGVVTTLALKLRSMQVEQ
                     ADEYRMLADGNSIKIRLLPPARGLIHDRNGLVIAGNEQNYRVTLTREEAGGDVEPVLR
                     RLSQLIPIGDDRMAELLEEFSRRSAVTPVVLADRLTWEQFSSIAVNAPALAGVTPESG
                     LSRIYPRAGDLAHVLGYVGPVSDYDLSKIEDPDPVLMLPDFQLGKVGMEAKMEADLRG
                     KAGARRVEVNSTGREMRELSRQEGQQGATIQTTLDARLQNYAAQRLGQESAAAVVMDV
                     QTGDIVAICSSPSFDPNKFVRGISSADYRGLMQHELRPLADKTVQGLYPPGSTFKPAP
                     LLAGLESGLINENTRFYCPGYIEVGGRRFHCWKRSGHGSMNPIQSMEQSCDVFYYELA
                     QRVGIDRIAAMARRLGIGVEHDLPMSAVAEGIAPDRAWKAARYGQDWQIGDSLNSSIG
                     QGYVLASPLQLALMTARVASGKVVVPRLIRSVDGIPRPLAEFPDLGVDPGLMRLAQGG
                     MEAVMNGARGTARRSRIIREDWRMAGKTGTSQVRNITAAERARGVVSNEDLPWSRRDH
                     ALFICYAPYQAPRYAVSVVVEHGGGGSTVAAPIGRDILLFALAGGLPPLDAIPDSERA
                     AMQERHAAMNLYVPDPPRATRSRA"
BASE COUNT          638 a         1144 c         1052 g          491 t
ORIGIN      
        1 cctcggccag cacggtgaag atgaagtcgg tatgcttttc cggcaagaag ttcagccgcg
       61 actgcgtgcc ctgcatgaag ccgcggcccg accagccgcc cgaaccaagc gcgatctggc
      121 tctggatgat gttgtagccc gcgcccagcg gatcggcggc ggggtcgagg aaggtgtcga
      181 tccggcggaa ctgataatcc ttcaaaagct gccagtcggt gccccggctt tccagcaccg
      241 tggcgacgag gccgacggcc atgccgatca ccgcgccgaa ataccacagc gacacgccgg
      301 cggcgaacat cacgattccg ccgcccgcga ccagcatgat cgacgtgccg aggtcgggct
      361 ggatgatgac cagcccggtc ggcgccagga tcagcaccac cggcagcagc acccagagcg
      421 ggcgcgagac ccggttcagc ggcagccagt cgtaataggc ggccagcagc aggaccaggg
      481 cgatcttcat cagttccgag ggttgcacgc gaatcggtcc gaaatcgatc cagcgccgcg
      541 cgcccatgcc gacctcgcca gcgacctcga cgccgacaag cagcaggaag cagccgatat
      601 aggccgcgac cgagatcccg cgccagaacc acatcggaac gaagcccagg ccgatcatga
      661 tcaccatgcc ggccgcgaaa cgatacatct gcggcttggc ccagcgatcg acatcgccgc
      721 ccgcgacgga aaccagcatc agaaagccga tcccggcaac ggcggtgatc agcaggatca
      781 gcggccagtt cagatacagc agcttgcgcc acccggtcgg ggtctgaagc acctgataat
      841 cgagatagga cattccggac cgttcccgtc aggcgcgcga gcgcgtggcg cgcggcggat
      901 cgggcacgta gagattcatc gcggcatggc gttcctgcat cgcggcgcgt tcgctgtcag
      961 gaatggcatc cagcggcggc agaccgccgg ccagcgcgaa cagcaggatg tcgcgaccga
     1021 tcggcgcggc cacggtcgaa ccgccgccgc catgttccac gaccacggaa accgcatagc
     1081 gcggcgcctg atagggggcg tagcagatga acagcgcgtg atcgcggcgg ctccagggca
     1141 gatcctcgtt cgacacgacc ccacgcgcgc gttcggcagc ggtgatgttg cgcacctggc
     1201 tggtgccggt cttaccggcc atgcgccagt cctcgcggat gatgcgcgat cgtcgcgcgg
     1261 ttccgcgcgc gccgttcatc accgcctcca ttccgccttg tgccagccgc atcaggcccg
     1321 gatcgacgcc cagatcggga aattcggcca gcggccgggg gatgccgtca acgctgcgga
     1381 tcaggcgcgg caccacaacc ttgccgctgg ccacgcgcgc cgtcatcaac gccagttgca
     1441 gcggcgaagc cagcacatag ccctgcccga tcgaagagtt caggctgtcg ccgatctgcc
     1501 aatcctgtcc ataacgcgca gccttccagg cccggtcggg cgcgatgcct tctgccaccg
     1561 cggacatcgg cagatcatgc tctaccccga ttcccagtcg ccgcgccatc gcggcgatcc
     1621 ggtcgatgcc gacccgctgg gccagttcgt aatagaacac gtcgcagctt tgctccatgc
     1681 tctggatcgg gttcatgctg ccgtgtccgc tgcgcttcca gcaatgaaag cggcggccgc
     1741 cgacctcgat gtaaccggga cagtagaagc gggtattttc gttgatcagc cccgattcga
     1801 gcccggccag cagcggcgcc ggcttgaagg tcgagcccgg cggatagagc ccctgaaccg
     1861 tcttgtcggc cagcggccga agttcgtgct gcatcagccc gcgataatcg gccgaggata
     1921 tgccgcggac gaacttgttc ggatcgaaac tgggcgagga acagatcgcg acgatatcgc
     1981 cggtctgcac atccatgacc acggccgcgg cgctttcctg gcccagccgc tgcgccgcgt
     2041 aattctgcag ccgggcatcc agtgtggtct ggatcgtcgc gccctgctga ccctcttgcc
     2101 ggctcagttc gcgcatctcg cggccggtgc tgttgacctc gacccgccgc gccccggcct
     2161 tgccgcgcag atcggcctcc atcttggctt ccatgccgac cttgccaagc tggaagtcgg
     2221 gcagcatcag caccggatcg ggatcctcga tcttcgagag atcgtaatcc gacacaggtc
     2281 cgacatagcc cagcacatgc gccagatcgc cggcgcgcgg ataaatccgc gaaaggcccg
     2341 attccggcgt cacaccagcc agcgcggggg cattcacggc gatcgaactg aattgttccc
     2401 atgtcaggcg gtcggccagc accacggggg tgacggcgct gcgtctggaa aattcttcca
     2461 gaagctcggc catgcgatcg tcgccgatcg ggatcagttg cgacaggcgc cgcaggaccg
     2521 gctcgacatc gccgccggcc tcttcgcggg tcagggtgac gcgatagttc tgttcgtttc
     2581 cggcgatgac cagcccgttg cggtcatgga tcagaccgcg cgcgggcggc aaaaggcgga
     2641 tcttgatcga attgccatcc gccagcattc gatattcgtc ggcctgctcg acctgcatcg
     2701 agcgcagctt cagcgccagc gtcgtgacca cgccaagctg gacggtgccc aacagcagac
     2761 cgcgccgccc gatcaggcgg gcgctgtcga cgatctgacg ttcggtcttc ttcatctcgc
     2821 gaatctcgtc cgttcggccg cgcccgggct gacccgccgc aacccgacca gccagcgcgc
     2881 cgcaaacacc gtgaccgggt aggcggcgat gctggccaga tattgcagga tcgcctggcc
     2941 cagggccggg accggcagga agaacaccac ctgaatgacc cggtagccca gcatcatcgc
     3001 cccgatcagg atcgcgacgc gcagccattc aaccatgaaa gactgatcgc gccaacgggg
     3061 ctcacgcagg cgtgcggcct cgctgcccag aagcacgatc agcggccaca ggcccagcgg
     3121 acgatagaga aaaacatctt ccagcaggaa ggccgcgacg atcacgaggg cgggcaactg
     3181 gtcggggcgg cgcagcaccc aggcgaaggt caggcccagg gcaacgtccg gacccggcca
     3241 gcccgtcagc ccggtcgaaa gcggcagcag gcgcacgaaa agcagcacgg caaagcacag
     3301 cccgaacagg accgtgccac cgaag
//
LOCUS       DTVW01000278            1270 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1357881, whole
            genome shotgun sequence.
ACCESSION   DTVW01000278 DTVW01000000
VERSION     DTVW01000278.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1270)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1270)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1270
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1357881"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1250)
                     /gene="mnmG"
                     /locus_tag="EYO87_03690"
     CDS             complement(<1..1250)
                     /gene="mnmG"
                     /locus_tag="EYO87_03690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009825713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis enzyme MnmG"
                     /protein_id="HIC65095.1"
                     /translation="MKHFDVIVIGAGHAGLEAAGAAARMGADVALITMRREDIGALSC
                     NPAIGGLGKGHLVREIDALDGLMGRIADRAGIQFRLLNRRKGPAVQGPRAQMDRAIYR
                     KVAHDLMSRLPGLTLIYGCVEALAGDESRVTGIEMEDGTAYSACATVLTTGTFLNGTI
                     HIGDVSHAAGRWGDENARGLATSLRRFDLPLGRLKTGTPPRLDGRTIDWSRLDRQPGD
                     DEPTLFSYLSTGVSGPQISCGITHTNPETHDIIRENLSRSAMYGGHISGKGPRYCPSI
                     EDKVLRFSEKKSHQVFLEPEGLNDPTIYPNGISTSLPAGIQEAYVRTITGLEQAVILQ
                     PGYAVEYDYVDPRALSSSLQLRAVSGLFLAGQINGTTGYEEAAAQGLVAGLNAALLAQ
                     RKPAIKFSRSESYIGVMIDDLVSRG"
BASE COUNT          258 a          405 c          352 g          255 t
ORIGIN      
        1 ccccgggaca ccagatcgtc gatcatgacg ccgatatagc tctctgatcg gctgaatttg
       61 atcgcgggtt tccgctgtgc caacaaagca gcattcagtc ctgcaaccaa accttgcgcg
      121 gcggcctctt catatcccgt cgtgccgttg atctgtccag caaggaaaag gccgctgaca
      181 gctcgaagtt gaagcgatga cgacagcgca cgaggatcga cgtagtcgta ttcaacggcg
      241 taaccgggct gaagtattac agcctgctcg agccccgtga tcgttcggac ataggcttcc
      301 tgaatcccag ccggcagcga tgtcgaaatt ccgttgggat aaatcgtcgg atcgttcagc
      361 ccctcgggtt caagaaaaac ctggtgcgat ttcttttccg agaaccgaag aaccttgtcc
      421 tcgatcgacg ggcagtatcg agggcccttc ccggaaatgt gtccgccata cattgcggaa
      481 cgagataggt tttctctaat gatgtcatgt gtttccgggt ttgtatgtgt gataccgcaa
      541 gagatctgcg gcccactcac gcctgtgctg agataggaaa acagcgtcgg ctcatcgtct
      601 ccgggctgcc gatcaaggcg ggaccaatcg atcgtccgcc cgtctagccg aggcggcgtt
      661 cccgtcttca ggcgacccag cggaagatcg aaacggcgaa gcgacgtcgc caagcctctc
      721 gcattctcgt caccccagcg accggctgca tgcgatacgt cgccgatatg aatggtcccg
      781 ttgaggaacg tcccggtggt cagcacggtg gcacatgccg aataggcggt cccgtcctcc
      841 atctcgatcc cggtcacgcg gctctcgtcg ccggccagcg cctcgacgca tccgtagatc
      901 aacgtcagtc cgggaagacg ggacataaga tcatgcgcga ccttgcgata gattgcgcgg
      961 tccatctggg cgcgcggccc ctgaaccgcg ggccccttgc gtcgattgag cagccggaac
     1021 tgaatcccgg cccggtcagc gatccgcccc atcagtccgt caagcgcgtc tatttcccgg
     1081 acaagatgtc ctttgcccaa cccgccgatc gccgggttgc aggacaatgc gccaatatcc
     1141 tcgcgccgca ttgtgatcag cgcgacatca gcccccatgc gcgccgccgc gcccgcggct
     1201 tcaagtccgg cgtgaccggc tccgatcaca atcacatcaa aatgtttcac gtgaaacgcc
     1261 ctatttcccg
//
LOCUS       DTVW01000279            4752 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1359220, whole
            genome shotgun sequence.
ACCESSION   DTVW01000279 DTVW01000000
VERSION     DTVW01000279.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 4752)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4752)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4752
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1359220"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..215)
                     /locus_tag="EYO87_03695"
     CDS             complement(<1..215)
                     /locus_tag="EYO87_03695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007204747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF21 domain-containing protein"
                     /protein_id="HIC65096.1"
                     /translation="MDDPPISFDAAIWLTAAAIVVLLALSAFFSGSETALTAASRSKL
                     RSRADRGDAGAIAALNVTEDSEKLIGA"
     gene            complement(196..1197)
                     /locus_tag="EYO87_03700"
     CDS             complement(196..1197)
                     /locus_tag="EYO87_03700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352898.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine recombinase"
                     /protein_id="HIC65097.1"
                     /translation="MTPDYRAISAFLDAQAAEAGAARNTLLAYGRDLRDLSDWLARRE
                     SSLALLGRETIESYLAHCDAQGLSRATRARRLSSIRQFTRFALEEGWRQDDPAIRITG
                     PGRAHRLPATLDRAEIEAMLRVAPEIGRTRTDRTRNRCLIELLYATGMRVSELVALPV
                     ASCRGDPAVLLIRGKGGKERMVPLTGPARTALAEWLRIRDRADRSSPLGRAIADKGAR
                     WLFPAPGAAGHLPRQGLGRILNDMAARAGVDPSRVTPHVIRHAFATHLLEGGADLRSI
                     QSLLGHADLGTTEIYTHVLDERMRDLVLNHHPLAGVPAPDESLPANQDRQDHGRPSD"
     gene            complement(1194..2705)
                     /locus_tag="EYO87_03705"
     CDS             complement(1194..2705)
                     /locus_tag="EYO87_03705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017997987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65098.1"
                     /translation="MRGATLALMLGLPAAAQQQPLSASDWLSGSLKAPPRESSSWRPG
                     QKPPPGVEGAAGNPRPVAPSGSVGQVQVTRLGHGDPDAAGTQSPRRAGLPADLWQGSA
                     TADLLDPIRQTPARLPAMTALMLRLLTAQLPPPIPGPADAPADTDSGADTGAGPAAVE
                     SGQLLLARADRLLDMGALDRAQALLMATGAGDPQIFRRLFDIALLEGDESRACDIMNT
                     TPGIAPSFAARIFCLAQTGDWAAAAISLSGAERLRLISADQALLMQHFLDDTFVDSGE
                     VLEPSQPMTPLNFRIFEAIGQPLPSLGLPIAFAQSDLRANNGWKTRLEAAERLARIGA
                     IDPGRLRAIYAEQKPPASGGVWERAGAMRTLEAALAQGDPAAALPAAFDQFRAAGMAD
                     VLAAMVADELPPNLEGRAGEVASWLRQWQGLPAATPLPTDPVLLSGQTPPPAQRRGEA
                     LLAAMADIDAGLDGDLARAGRGLAVLRGLGLEADADLAAAQLSLLPVMTKAPQ"
     gene            2994..3545
                     /locus_tag="EYO87_03710"
     CDS             2994..3545
                     /locus_tag="EYO87_03710"
                     /EC_number="2.7.1.71"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009562151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase"
                     /protein_id="HIC65099.1"
                     /translation="MAQRLGRHILLIGMMGAGKTAVGHELARRLRVPFTDSDTEIEAA
                     AAMTISEIFARDGEAFFRDRESQVIARILGQGPGVISTGGGAWMQARNREMIRRRAMS
                     VWLNCDLEILWHRVRQRATRPLLQTADPKGTLEHLLAQRAPVYAMADLDFRVRSGDSI
                     EQSATRLLQAIRHADADLLQETK"
     gene            3542..4663
                     /locus_tag="EYO87_03715"
     CDS             3542..4663
                     /locus_tag="EYO87_03715"
                     /EC_number="4.2.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012178280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase"
                     /protein_id="HIC65100.1"
                     /translation="MTAAEDPVAVHVPLGARAYEVRIGAGLIRRAGAEIAPLLIRPRL
                     AVVTDENVARLHLATFRDALSAAGIACEALVLPAGEGTKSWPHLTRVVEWLLENRIER
                     RDMVVAFGGGVIGDLVGFAAAILRRGVRFVQVPTSLLAQVDSSVGGKTGINSAHGKNL
                     IGAFHQPALVLADIALLDSLETRDFLAGYGEVAKYGLLGDADFFAWLETNAPRLRSDP
                     AARQHAVAHSVAMKAAIVSRDETEQGERALLNLGHTFGHALEAATGYSGRLLHGEGVA
                     IGCALAFDLSARMGLCSQEAPSRVAQHLRQMGMPARLSEIPGDLPDDAALVALMGQDK
                     KVLDGRLRFVLARDIGAAFVCDQVPGDLLRQLLRESRDG"
BASE COUNT          737 a         1577 c         1714 g          724 t
ORIGIN      
        1 atcgcgccga tcagcttttc gctgtcctcg gtcacgttca gcgcggcgat cgcgcccgca
       61 tcgccgcgat cggcgcgcga gcgaagcttg gaccggctgg cggccgtcag cgcggtctcg
      121 gatcccgaga agaaggcgga cagggccagc aggaccacga tggcggcggc ggtcagccag
      181 atggcggcgt cgaaactaat cggagggtcg tccatggtcc tgtcggtcct ggttggcggg
      241 aagggattcg tccggcgccg gaacgccggc cagcggatga tggttcagca ccagatcgcg
      301 catccgctcg tccagcacat gggtatagat ttcggtggtg cccagatcgg catggcccag
      361 aagggactgg atgctgcgca gatcggcgcc accctccagc agatgggtgg caaaggcatg
      421 gcggatcaca tgcggcgtca cgcgggacgg atcgacgccc gcccgggcag ccatgtcgtt
      481 caggatgcgc ccaaggccct gcctcggcag atgaccggcg gcgccggggg cgggaaacag
      541 ccagcgcgcg cctttgtcgg caatcgcccg gcccagcggg ctggacctgt cggcccgatc
      601 gcggatccgc agccattccg caagcgccgt cctggccggt ccggtcagcg ggaccatgcg
      661 ttccttgccg cccttgcccc ggatcagcag cacggcagga tcgccccggc aggacgcgac
      721 cggcagcgcg accagttcac tgacgcgcat tccggtggca tagagcagct cgatcaggca
      781 ccggttgcgg gtccgatcag tccgggtccg gccgatctcg ggggcgaccc gaagcatggc
      841 ctcgatctcg gcccggtcca gcgtcgcggg caggcggtgg gcgcggccgg gaccggtgat
      901 gcggatggcc gggtcgtcct ggcgccaacc ctcttccagg gcaaagcggg tgaactggcg
      961 gatcgaggac agccgccttg cgcgcgtggc ccgcgacagg ccctgggcgt cgcaatgggc
     1021 gagatagctt tcgatcgttt cgcgacccag tagcgccaga gaggattcgc gccgggccag
     1081 ccagtcggac agatcgcgca gatcgcggcc ataggccagc agcgtattgc gcgcggcccc
     1141 ggcttcggcg gcctgggcgt ccagaaacgc cgagatggcg cggtaatcgg gcgtcattgc
     1201 ggcgctttcg tcatcaccgg cagcagcgaa agctgcgcgg cggcaagatc ggcatccgcc
     1261 tcgaggccca gtccgcgcaa gaccgccagc ccgcgcccgg cgcgggccag atcaccatca
     1321 agtccggcat cgatatcggc catcgcggcc agcagcgcct cgccgcgccg ttgggccgga
     1381 ggcggggtct gaccgcttag aagcacggga tcggtcggca gtggcgtcgc ggcgggcagg
     1441 ccttgccatt ggcgcagcca gctcgcgacc tcgcccgcgc ggccttccag gttcggcggc
     1501 aattcgtcgg ccaccatcgc ggccagcaca tccgccatgc cggccgcgcg gaactgatcg
     1561 aaggccgccg gcagggcggc ggcgggatcg ccctgtgcca gggccgcctc aagcgtgcgc
     1621 atggccccgg cgcgttccca gaccccgccc gaagccgggg gtttctgttc ggcatagatc
     1681 gcgcgcagac gaccggggtc gatggcgccg atccgggcca gacgctcggc cgcttccagg
     1741 cgcgtcttcc agccattatt ggcgcgcagg tcggactggg cgaaggcgat gggcaggccc
     1801 aggctgggca gcggctggcc gatcgcctcg aagatgcgga aattcagcgg cgtcatcggc
     1861 tgcgacggtt ccagcacctc gccgctatcg acgaaggtat cgtcaaggaa atgctgcatc
     1921 agcagcgcct gatcggcgga aatcagacgc aggcgttcgg ccccgctcag gctgatcgcg
     1981 gcggcggccc agtcgccggt ctgggccagg cagaagatgc gcgcggcaaa gctgggcgcg
     2041 atgccgggcg tggtgttcat gatgtcgcag gcgcggctct cgtcgccctc gagcagcgcg
     2101 atatcgaaca ggcggcgaaa gatctgcgga tcgcccgcgc ccgtcgccat cagcagcgcc
     2161 tgggcccggt ccagcgcgcc catgtccagc aatctgtcgg cccgcgccag cagcagttgc
     2221 ccgctttcca cggcagccgg gccggcaccg gtatcggcac cgctatcggt atcggccgga
     2281 gcatcggcgg gcccggggat cggcggcggc aattgcgcgg tcagcaggcg cagcatcagc
     2341 gcggtcatcg ccggcaggcg cgcgggcgtc tgtcggatcg gatccagcag atcggccgtc
     2401 gcgctgccct gccacagatc ggcgggcaga cccgcgcggc gcggcgattg cgtgcccgcc
     2461 gcatccggat cgccatggcc aagccgcgtc acctgaacct gcccgaccga gccggaaggg
     2521 gccaccgggc gcggatttcc ggccgcgcct tccacaccgg gcggcggttt ctgccccggc
     2581 cgccaggacg aactttcgcg cggcggcgcc ttcaggctgc ccgacagcca gtcgcttgcc
     2641 gacaggggct gttgctgggc ggcggcaggc aggcccagca tcagcgccag ggtcgcgccg
     2701 cgcatcaggc gaaaggaaag gtctctagtc accggaaccg cccatggtcg ggatcggttt
     2761 gcggacttcc tgtcggtcgg cctgcatgtc gccgaaatag gcgtaaccga ccagcccgaa
     2821 cagagccgcc agaatcagca ccaccagaac cttgatcaac cgcatcgaat cttgcctcgc
     2881 tcgccgtgaa atttcgtgtc tttcggccgg tctttcgccc gctcggcctg aatatatatg
     2941 gcaatttccg aaagatcacg ccattcagtc agcccagaac aggggagacg ggaatggcgc
     3001 agcgtctggg tcggcatatt ctgctgatcg gcatgatggg ggcgggcaaa accgccgtgg
     3061 gccatgaact ggcccgccgt ctgcgcgtgc ccttcaccga ttccgatacc gagatcgagg
     3121 ccgccgcggc gatgaccatc tcggaaatct tcgcccgcga cggcgaggcc ttcttccgcg
     3181 accgcgaatc acaggtcatc gcgcgaatcc tgggtcaggg accgggcgtg atctcgaccg
     3241 ggggcggggc ctggatgcag gcgcgcaatc gcgagatgat ccgccggcgg gccatgtcgg
     3301 tctggctgaa ttgcgatctg gagatcctgt ggcatcgggt gcggcaacgc gcgacccggc
     3361 cgttgttgca gaccgccgat cccaagggca cgctggagca tctgctggcg cagcgcgcac
     3421 cggtctatgc gatggcggac ctggactttc gggtccgctc gggcgacagc atcgaacaat
     3481 ccgcgacccg gctgttgcag gcgatccgcc acgccgatgc cgaccttttg caggagacga
     3541 aatgactgcc gccgaagacc ctgttgccgt tcatgtgccg ctgggcgcgc gtgcctacga
     3601 ggtgcgcatc ggcgcgggtc tgatcagacg cgcgggggcc gagatcgcgc cgctgctgat
     3661 ccgcccgcgt ctggccgtcg tcaccgacga aaatgtcgcg cgactgcacc tggcgacgtt
     3721 tcgcgacgcg ctctcggcgg cgggcatcgc ctgcgaggcg ctggtgctgc cggcgggcga
     3781 gggcaccaaa agctggccgc acctgacccg cgtggtggaa tggctgctgg aaaaccggat
     3841 cgaacgacgc gatatggtgg tcgcgttcgg cggcggcgtg atcggcgatc tggtgggttt
     3901 cgcggccgcg atcctgcggc gcggagtgcg cttcgtccag gtcccgacgt cgttgctggc
     3961 gcaggtcgac agcagtgtcg gcggcaagac cggtatcaac tccgcccatg gcaagaacct
     4021 gatcggcgcc ttccaccagc cggcgctggt cttggccgat atcgcgctgc tggacagcct
     4081 ggagacgcgc gattttctgg ccggctatgg cgaggtggcg aaatacgggc tgctggggga
     4141 cgcggatttc ttcgcctggc ttgaaacgaa cgcgccgcgg ctgcgatccg atccggcggc
     4201 acggcaacat gcggtggccc attcggtggc gatgaaggcc gccatcgtca gccgcgacga
     4261 gaccgagcag ggtgagcgcg cgcttttgaa cctgggccac accttcggac acgcgctgga
     4321 agccgcgacc ggatattccg gccggttgct gcatggcgag ggggtggcga tcggctgcgc
     4381 gttggccttc gatctgtcgg cgcggatggg gctgtgcagc caggaggcgc catcgcgggt
     4441 ggcccagcat ctgcggcaga tggggatgcc cgcgcgcctg tcggagattc cgggcgatct
     4501 gcccgatgat gcggcgctgg tcgcgctgat ggggcaggac aagaaggtgc tggacgggcg
     4561 gcttcgcttt gtcctggccc gcgatatcgg cgcggctttc gtctgcgacc aggttccggg
     4621 cgatctgctg cgccaattgt tgcgcgaatc ccgcgacggg tagtggcggc gccggtcccg
     4681 acggcgaaac ggcgggcacg gtcggcaagc cggggggcga agccgcgcca gcctgcgcca
     4741 gcctgcgccg gg
//
LOCUS       DTVW01000280            1351 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1359239, whole
            genome shotgun sequence.
ACCESSION   DTVW01000280 DTVW01000000
VERSION     DTVW01000280.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1351)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1351)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1351
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1359239"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..633
                     /gene="ccoP"
                     /locus_tag="EYO87_03720"
     CDS             <1..633
                     /gene="ccoP"
                     /locus_tag="EYO87_03720"
                     /EC_number="1.9.3.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit III"
                     /protein_id="HIC65101.1"
                     /translation="QRADWTQALATLPAEDIRQDPALMARVAQTAPALFGDNCAACHG
                     TNAAGGPGFPSLVDDAWLWGGDTATIMETLRVGINAPHPDSRSSQMLAFGETGILTRP
                     QIRTVVNYVQSLSGRETQADAQQLAEGATIFAENCASCHGENAMGNQDIGAPNLTDDF
                     WIYGGDDAAMFTTIDLGRQGWMPAWEGRLTTAERMALTIYIQDLGAEQGK"
     gene            794..>1351
                     /locus_tag="EYO87_03725"
     CDS             794..>1351
                     /locus_tag="EYO87_03725"
                     /inference="COORDINATES: protein motif:HMM:PF09955.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2189 domain-containing protein"
                     /protein_id="HIC65102.1"
                     /translation="MLSDRTDPPPPDNPHAGGVIPKVVPPLPRENPHARNLPWRTALR
                     WLRAGWSDLWTNPVPSLLYGAGVFAVSLLVVLALFQFRYEYTLFPALAGFMVLGPLIA
                     NGLYEKSRRRETGEKIGLGGMIFVRPRSGYQALFMGVMLLGLFLLWLRAAVLIYALFF
                     GMVPFPGTDELVPMLFLTPTGWALLL"
BASE COUNT          206 a          452 c          446 g          247 t
ORIGIN      
        1 caacgcgccg actggaccca ggcgctggcc acgctgccgg ccgaggacat ccgccaggat
       61 cccgcattga tggcgcgggt cgcacagacc gcaccggcgc ttttcggcga caattgcgcc
      121 gcctgccacg ggacgaatgc cgccggcggg ccggggttcc ccagccttgt cgacgatgcc
      181 tggctgtggg gcggtgatac tgccacgatc atggaaaccc tgcgcgtggg gatcaatgcg
      241 ccccatcccg acagccgcag ttcccagatg cttgccttcg gcgagaccgg gatcctgacg
      301 cggccgcaga tccgcaccgt cgtgaactac gtccagtccc tgtccggccg agaaacgcag
      361 gccgatgcgc agcaactggc cgagggcgca acgatctttg ccgagaactg cgccagttgt
      421 catggcgaga acgccatggg caaccaggac atcggtgcgc cgaacctgac cgacgatttc
      481 tggatctatg gcggcgacga tgccgcgatg ttcacgacga tcgacctggg ccggcagggc
      541 tggatgcccg cctgggaggg ccggctgaca acggccgagc gcatggcgct gacgatctac
      601 atccaggatc ttggcgcgga gcaaggcaaa tgacccgccc gcgtcttgtc gccttcggct
      661 ctgccgggtt gctggttgcg gggtttgtcg cggccaatgc ccatctcgtt ctgaccgcga
      721 tcggctcgca gcccgattgc gtcctcgaag ccccaccgaa agaaggcgcc gcgccccgag
      781 cggcggaacc gtcatgctga gcgaccgcac cgatccgccc ccgcccgaca acccccatgc
      841 ggggggcgtc atccccaagg tggttccacc tctcccgcgc gagaacccgc acgcccgcaa
      901 cctgccatgg cggacagccc tgcgctggct tcgggcgggc tggtccgatc tgtggaccaa
      961 tcccgtgccc agcctgcttt acggcgcggg tgtctttgcg gtttcgctgc tggtggtcct
     1021 ggcgctgttc cagttccgct atgaatatac gctgttcccg gcgctggcgg gattcatggt
     1081 cctgggtccg ctgatcgcga acggcctcta cgaaaaaagc cgccgacggg agacgggcga
     1141 aaagatcggg ctgggcggca tgatcttcgt gcgcccgcgt tctggctatc aggcgctttt
     1201 catgggcgtc atgttgctgg ggctgttcct cttgtggctc agggcggcgg tgctgatcta
     1261 tgcgctgttc ttcggcatgg tgccgtttcc gggcaccgat gaactggtcc cgatgctgtt
     1321 tctgaccccg acgggctggg cgctgcttct g
//
LOCUS       DTVW01000281            4040 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1359283, whole
            genome shotgun sequence.
ACCESSION   DTVW01000281 DTVW01000000
VERSION     DTVW01000281.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 4040)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4040)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4040
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1359283"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..143
                     /locus_tag="EYO87_03730"
     CDS             <1..143
                     /locus_tag="EYO87_03730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013068483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HIC65103.1"
                     /translation="AYPIAAGYFILATLVLIGLFGVANRRLNRHLPGATRGLKYRPQL
                     LR"
     gene            149..1480
                     /locus_tag="EYO87_03735"
     CDS             149..1480
                     /locus_tag="EYO87_03735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018000403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine synthetase"
                     /protein_id="HIC65104.1"
                     /translation="MEWLRQHPDVKTIRVAAADLNGVARGKRVAARFVDKLVDEGTKF
                     PFSVMNLDIWGEDIEDSPLVFEAGDPDGLLLPTERGFLPMPWLDAPTALLPLWMFHPD
                     GRPYDGDPRQALARVVDRYKAAGLVPVVATELEFFLIDDSGRTLRVPPSPRSGKRRTG
                     GEVLSLRALDAFDQFFTTLYDACESMDIPVDTSISEAGPGQFEINLMHQADPLKAADD
                     TWLFKMLVKGVARSYGFAASFMAKPYDAWPGNGMHMHFSVLAKDGRNIFDNGGDEGTE
                     ALRHAVAGCLRAMPGSTLLFAPHENSYDRLVPNAHAPTGIGWSYENRTAAIRIPSSGP
                     KARRIEHRVAGGDVNPYLTVAAILGAALNGIEDRLQAPAPFKGNAYDQQLAQLPADWG
                     EAIEAFDTCPEIRRIFPEHLIDNYLRTKRQELHYMAELSDEETVELYLDTV"
     gene            1665..2591
                     /locus_tag="EYO87_03740"
     CDS             1665..2591
                     /locus_tag="EYO87_03740"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I fructose-bisphosphate aldolase"
                     /protein_id="HIC65105.1"
                     /translation="MQMTDTVRRILAHYEGETPGVKAQLARMLMTGRLAGTGKMIILP
                     VDQGFEHGPARSFAPNPAAYDPHYHYQLAIDAGLNAYAAPLGMIEAGADSFAGQIPTI
                     LKVNSANSLMSDTAGKNQAVTASVDDALRLGCAAIGFTIYPGSDMALDMFEEIVAMRK
                     EAAAKGVATVIWSYPRGEAITKDGETAIDIAAYAAQIAALIGAHVIKIKLSTDHLMLP
                     EAKKVYEDKKIDIATQAKRVEHCMQAAFAGRRIVVFSGGAAKGADAVYDDARAIRDGG
                     GNGSIIGRNSFQRSREDALEMLGKLVDIYKGA"
     gene            2785..>4040
                     /locus_tag="EYO87_03745"
     CDS             2785..>4040
                     /locus_tag="EYO87_03745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013067796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4445 domain-containing protein"
                     /protein_id="HIC65106.1"
                     /translation="MADDPLVIFTPSGRRGRVPVGTPVLEAARRLGVDLDSVCGGRGI
                     CSKCQVEPGHGAFPKHGVTVACDALSPFNAVEERYDRIRGLKPGRRLGCQARIQSDLV
                     IDVPPESQLHRQVIRKSAAERVMAMDPAVRPFYVEVAEPDLDDPTGDFQRLSAALASA
                     WGIEGLRADLPVLARIQQVLRKAGWKVTAVVRDDGQRAPLLVDLWPGLSESPLCGVAV
                     DLGSTTIAGHLVALDDGRVLASSGLMNPQIRFGEDLMSRVSYAMMNAGGAAEMTRAVR
                     EGLGHLIGTLAAEAGIEAARIVDAVIVCNPVMHHLMLGIDPVELGQAPFAPATSDALT
                     VAAAELGLGISPAARAYVLPIIAGHVGADAAAVVLSEQPQKSRNPVLIVDVGTNAEIV
                     LGDCRRVLACSSPTGPAFEGAQISSG"
BASE COUNT          666 a         1269 c         1399 g          706 t
ORIGIN      
        1 tcgcctatcc catcgcggcc ggatatttca tccttgccac gctggtcctg atcggcctct
       61 tcggggtcgc caacaggcgg ctgaaccgcc atctgcccgg cgccacccgc ggtttgaaat
      121 accgcccgca actgctgaga tgatcccgat ggaatggctg cgacaacatc ccgacgtcaa
      181 gaccatccgc gtcgccgccg ccgacctgaa cggcgtcgcg cgcggcaagc gggtggcggc
      241 gcgtttcgtc gacaagctgg tggacgaggg cacgaaattt ccgttctcgg tgatgaacct
      301 ggatatctgg ggcgaggata tcgaagacag cccgctggtc ttcgaggccg gcgatcccga
      361 cggtctgctg ctgccgaccg aacgcggctt tctgccgatg ccctggctgg acgcgccgac
      421 cgcgttgctg ccgctgtgga tgttccatcc cgacgggcgg ccctatgacg gcgatccgcg
      481 tcaggccctg gcccgcgtcg tggaccgcta caaggccgcc ggcctcgttc ccgtcgtggc
      541 gaccgagctg gaatttttcc tgatcgacga ttccggccgc accctgcgcg tgccgcccag
      601 cccgcgctcg ggcaagcgcc gcaccggggg cgaggtgctg agcctgcgcg cgctggatgc
      661 cttcgaccag ttcttcacca cgctctacga tgcctgcgaa tcgatggaca tcccggtcga
      721 tacttcgatt tccgaggccg gaccgggaca gttcgagatc aacctgatgc accaggccga
      781 tccgctgaag gccgccgacg acacatggct gttcaagatg ctggtcaagg gcgtggcgcg
      841 gtcctacggg ttcgcggcca gtttcatggc caaaccctat gacgcctggc cgggcaacgg
      901 gatgcacatg catttttcgg tgctcgcgaa ggatggccgg aacatcttcg acaatggcgg
      961 cgacgagggc acggaagccc tgcgccatgc cgttgcgggc tgtctgcgtg ccatgccggg
     1021 atcgacgctg ctattcgcgc cgcacgagaa ttcctatgac cggctggtgc ccaacgccca
     1081 tgcaccgacc gggatcggct ggtcctatga aaaccggacg gcggcgatcc gcattccgtc
     1141 ttcgggcccc aaggcccggc ggatcgaaca tcgcgtcgcg ggtggcgatg tgaaccccta
     1201 tctgacggtc gcggcgatcc ttggcgcggc actgaacggg atcgaggaca ggcttcaggc
     1261 ccccgcgccc ttcaagggca atgcctatga tcagcaactg gcccagcttc cggctgattg
     1321 gggcgaggcg atcgaggcct tcgatacctg ccccgagatt cgtcggatct ttcctgaaca
     1381 tctgatcgac aattatctgc gcaccaagcg gcaggaattg cactacatgg ccgaattgtc
     1441 cgatgaggaa acggtcgaac tgtatctcga cacggtctga tggccgacgg gcgcggaccg
     1501 tttggcacgg tcccgcggcc gccgggctgc atcgccgtcg gccgggaggg cgccggatca
     1561 tcacctcagg ttgaaaaccg ttgcccgccc cggctgttag cgtcaccagc gttgccagtc
     1621 ccggcgccta tgctattcaa ccgccagcac aaaggagttt ttcgatgcag atgaccgaca
     1681 cggtgcgccg gatcctggcc cattacgagg gcgagacgcc gggggtgaaa gcgcaactgg
     1741 cgcggatgct gatgaccggc aggctggcgg gcaccggcaa gatgatcatc ctgcccgtcg
     1801 atcagggttt cgaacacggg ccggcgcggt cattcgcgcc caaccctgcc gcctatgatc
     1861 cgcattacca ttatcagctg gccatcgacg cggggctgaa tgcctatgcc gcgccgctgg
     1921 gcatgatcga ggccggggcg gacagcttcg cgggccagat cccgaccatc ctgaaggtca
     1981 acagcgccaa cagcctgatg tccgacacgg ccggcaagaa ccaggcggtc acggcctcgg
     2041 tcgacgacgc gctacggctg ggctgcgcgg cgatcggctt cacgatctat ccgggcagcg
     2101 acatggcgct ggacatgttc gaagagatcg tcgcgatgcg caaggaagcc gcagccaagg
     2161 gtgttgccac cgtgatctgg tcgtatccgc gcggcgaggc gatcaccaag gacggcgaga
     2221 ccgccatcga catcgccgcc tatgccgccc agatcgcggc gctgatcggc gcgcatgtga
     2281 tcaagatcaa gctgtccacc gatcacctga tgctgcccga agccaagaag gtctacgagg
     2341 acaagaagat cgatatcgcg acgcaggcga agcgtgtcga gcactgcatg caggcggcct
     2401 tcgcggggcg ccggatcgtg gtcttttcgg gcggcgccgc caagggcgcg gatgcggtct
     2461 atgacgatgc ccgcgcgatc cgcgacggcg gcggcaatgg cagcattatc ggccgtaaca
     2521 gctttcagcg ttcgcgcgag gatgcgctgg aaatgctggg caagctggtg gacatctaca
     2581 agggcgcctg agggccgcga cattgcgcct gcgggcgcgc ggggaggggg cgctcgcgcc
     2641 ccctcttgcg ttgcgggcaa cgcaattcac cccccgaggg tatttgtcca acgaagacgt
     2701 cggaaacgcg ccgatttgag gcggattgcg gtgttgcgac gcgcgcgacc cggcgataat
     2761 cggggcgttg aagcgaggtt ttccatggcc gacgatcctc ttgtcatctt cacgccgtcg
     2821 ggcaggcggg gtcgggtgcc ggtgggcacg ccggtgctgg aagccgcgcg gcggctgggt
     2881 gtcgatctgg attcggtctg cggcggacgt ggcatatgtt ccaaatgtca ggtcgagccg
     2941 ggccatgggg cgtttcccaa acacggcgtg accgtggcct gtgacgctct gtcgccgttc
     3001 aacgcggtcg aggaacgtta tgaccgcatc cgcgggctga aaccggggcg gcggctgggc
     3061 tgtcaggcgc ggatccagtc ggatctggtg atcgacgtgc cgccagaaag tcagttgcac
     3121 aggcaggtga tccgcaaatc cgcagccgaa cgggtgatgg cgatggatcc cgccgtgcgg
     3181 cccttctatg tcgaggtggc cgagcccgat ctggatgatc cgaccgggga tttccagcgc
     3241 ctgtcggcgg ccctggcctc ggcctggggg atcgaggggc tgcgggcgga tctgcccgtt
     3301 ctggcgcgga tccagcaggt tctgcgaaag gcggggtgga aggtcacggc ggtggtgcgc
     3361 gatgacgggc agcgggcacc gctgctggtc gatctgtggc ccggtctgtc cgagtcgccg
     3421 ctttgcgggg tggcggtcga tctgggatcg accaccattg cggggcatct ggtggcgctg
     3481 gatgacggtc gggtgctggc ctcgtcgggt ctgatgaacc cgcagatccg ctttggcgag
     3541 gatctgatga gccgggtcag ctatgcgatg atgaatgcgg gcggcgcggc cgagatgacg
     3601 cgcgcggtcc gcgaaggtct gggccatctg atcgggacgc tggcggcgga ggccgggatc
     3661 gaggcggcgc gtatcgtgga tgccgtcatc gtctgcaatc cggtcatgca tcacctgatg
     3721 ctggggatcg acccggtcga actgggacag gcgcccttcg cgcccgcgac ctcggacgcg
     3781 ctgacggtcg cggcggcgga actgggtctg ggcatttccc cggccgcccg cgcctatgtg
     3841 ctgccgatca tcgccggcca tgtcggcgcg gatgcggcgg cggtggtgct gtcggaacag
     3901 ccgcagaaat cccggaaccc ggtcctgatc gtcgatgtgg gcaccaatgc cgaaatcgtt
     3961 ctgggcgatt gcaggcgggt gctggcctgt tcctcgccca ccggcccggc cttcgagggc
     4021 gcccagatca gcagcggtca
//
LOCUS       DTVW01000282            3662 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1359689, whole
            genome shotgun sequence.
ACCESSION   DTVW01000282 DTVW01000000
VERSION     DTVW01000282.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3662)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3662)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3662
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1359689"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..152)
                     /locus_tag="EYO87_03750"
     CDS             complement(<1..152)
                     /locus_tag="EYO87_03750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008553945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kynureninase"
                     /protein_id="HIC65107.1"
                     /translation="MTDFSRTKRAFHLPSGVTYLDGNSLGPMPRAAQQRVAAMMADEW
                     SDMLITG"
     gene            219..1010
                     /locus_tag="EYO87_03755"
     CDS             219..1010
                     /locus_tag="EYO87_03755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011924644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HIC65108.1"
                     /translation="MLYRITDWDDAYANARHIPDGEAWPARWAEAAAAFRQRHMPQPL
                     GQGHLFRPDGDVQGLVVFVHGGYWMRFDPSLWSHLAAGPLAHGWAVALPAYTLAPAAR
                     IPGITQEVARTIAQAAAAIAGPIALTGHSAGGHLAARMICDDGTLPAPLAARVSACVP
                     ISGLFDLRPLMRTRLNDTLRLDPAEAAAESPALLTPRADIPVTAWVGGAERPEFLRQA
                     RLLADIWAGLGAATQCVIAPGRHHFDVMESLACPDSAMTRALLSR"
     gene            complement(1000..1824)
                     /locus_tag="EYO87_03760"
     CDS             complement(1000..1824)
                     /locus_tag="EYO87_03760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016473165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HIC65109.1"
                     /translation="MTQPILTLNDHRPMPQLGLGVWQMPEGRTAEAVGEALRTGYRLI
                     DGAAMYGNEAGMGQAVRASGLPLDEVFVTSKLWNDQQGRDRTLRAFDATMQRLGLDHL
                     DLYLIHWPCPDRGLYVETWKTLIELRDAGRVRSIGVANFLPPHLIRLIDETGVAPALN
                     QIELHPGFNQADLRAENRRLGIVTQSWAPLGRGEDLAAAPIRRIAERLQATPAQVVLA
                     WHLAHGLSAIPKSQDPGRQRGNFGALQVTLSDDDMAAIDALDTGRRTGPDPASFNG"
     gene            complement(1874..2347)
                     /locus_tag="EYO87_03765"
     CDS             complement(1874..2347)
                     /locus_tag="EYO87_03765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012177758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaK/EbsC family protein"
                     /protein_id="HIC65110.1"
                     /translation="MSKSLNRVRAALVAAGAPVEIVEMGESTRTAAEAARAAGCGIDQ
                     IAKSVIFRGEESGHVVLFLTAGGNRVDPARAAAVAGQALGKADAALIRSETGFAIGGV
                     APLGHLKPVTAYFDPRLSDFDRVWAAAGTPRHIFAIAPDRLLAITGAVVADFSGR"
     gene            2450..3187
                     /locus_tag="EYO87_03770"
     CDS             2450..3187
                     /locus_tag="EYO87_03770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_354215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF421 domain-containing protein"
                     /protein_id="HIC65111.1"
                     /translation="MDQPVTPFDLQRMFLGEQPLLFYAEILVRTLIIYAYTLVMIRWI
                     GGRGVAQLSMVEFVLVIALGSAVGDAMFYPDVPLLAAMLVITGVIGMNKVLDLLILRS
                     DSAKHMIDGRAVALVHDGRLLPEGMDACDMGSAEIKALLRQNGVRNLGAVEHAYLESS
                     GGLSVFRFPSPRPGLSLVPPHSVVPDQPGAAPLTDPALAPGGLTCCARCGAIEAAHVA
                     LPDGRCGHCGGKVWVAPETPMAGTERS"
     gene            3184..3513
                     /locus_tag="EYO87_03775"
     CDS             3184..3513
                     /locus_tag="EYO87_03775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018302789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65112.1"
                     /translation="MNVYTLLVEVGRRTGDGLPGGSRGAALVCYASGRNEDEAVRETV
                     AILKQAGMAPLDVTGYGTREERLADGHEIDDEERALMNRARDENAVIIAQVQPFFDEA
                     RGSSDDD"
BASE COUNT          570 a         1303 c         1201 g          588 t
ORIGIN      
        1 cccgtgatca gcatgtccga ccattcatcg gccatcatcg ccgccacccg ctgctgcgcc
       61 gcccgcggca tcggccccag cgaattgccg tccagatagg tcacaccgga gggcaggtgg
      121 aaggcgcgtt tcgttcggct gaaatcggtc atgcgcgtct ccctgctctt gacccaaggc
      181 taccagccgc gtgacctgcg cggaagagga gcaccgccat gctgtatcgg atcaccgact
      241 gggacgacgc ctacgccaat gcccgccata ttcccgacgg cgaggcatgg cccgcccgct
      301 gggccgaggc ggcggcagcc ttccgccaac gccacatgcc gcagcccctt ggccaggggc
      361 atctgttcag gccggacggg gatgtgcaag gactggtggt cttcgttcat ggcggctact
      421 ggatgcggtt cgacccttcc ttgtggtcgc atctggcggc gggtccgctg gcccatggct
      481 gggcggtcgc cctgcccgcc tataccttgg ccccagccgc ccgcatcccc gggatcacgc
      541 aagaggtcgc ccgaacgatc gcccaggccg ccgccgcgat cgcgggcccg atcgcgctga
      601 ccggccattc cgccggcggc catcttgccg cgcggatgat ctgcgacgac ggcaccctgc
      661 ccgcgccgct ggccgcgcgc gtctcggcct gtgtgccgat ctcggggctg tttgacctgc
      721 gcccgctgat gcgcaccagg ttgaacgaca cgttgcggct cgacccggcc gaggccgccg
      781 ccgaaagccc ggccttgctg acgccccgcg cggatatccc ggtcacggcc tgggttggcg
      841 gcgccgaacg gccggaattc ctacgccagg cgcgccttct ggccgatatc tgggcgggcc
      901 tgggggcggc cacgcaatgc gtgatcgcgc ccggccgtca ccatttcgat gtgatggaat
      961 cgctggcatg ccccgacagc gcgatgacgc gggcgctgct cagccgttga aactcgcagg
     1021 atcggggcca gttcgccgcc ccgtgtccag ggcatcgatg gcggccatgt catcatcgga
     1081 cagcgtgacc tgcaaggcgc cgaaattccc gcgctggcga cccggatcct gcgatttcgg
     1141 aatcgccgac agaccatgcg ccaaatgcca cgccagcacc acctgcgccg gcgtggcctg
     1201 cagccgttcc gcgatccgcc tgatcggcgc ggcggccaga tcctcgccgc ggcccagcgg
     1261 tgcccaggac tgcgtcacga tccccagacg ccggttctcg gcccgaaggt cggcctggtt
     1321 gaagccggga tgcaactcga tctgattcag cgccggggcc acgccggtct cgtcgatcag
     1381 ccggatcagg tgcggcggca ggaaattggc gaccccgatc gacctgaccc gcccggcatc
     1441 gcgcaattcg atcagcgtct tccaggtttc gacatagagc ccgcggtccg gacagggcca
     1501 gtggatcaga tacagatcca gatgatcgag gcccagccgc tgcatcgtcg catcgaacgc
     1561 ccgcagggtc cggtcccgcc cctgttggtc gttccacaat ttcgaggtca cgaaaacctc
     1621 gtcgagcggc aggccggacg cgcgcaccgc ctgccccatc cccgcctcgt tgccatacat
     1681 cgccgccccg tcgatcagcc ggtagccggt tcgcagcgcc tcgcccaccg cctcggcagt
     1741 ccggccttcc ggcatctgcc agacacccag gccaagctgc ggcatcgggc ggtgatcgtt
     1801 cagggtcaga atgggttggg tcatgtctac actcctttgg cagcgggtga acgcggccgg
     1861 ggcgcggccc gtttcaccgg ccgctgaaat ccgccaccac cgctccggtg attgccaaca
     1921 gacgatcggg cgcgatggcg aagatgtggc gcggcgtgcc cgccgcggcc cagacccggt
     1981 cgaaatccga caggcgcgga tcgaaatagg ctgtgaccgg cttcagatgc cccagcggag
     2041 ccaccccgcc gatcgcgaac ccggtctcgg accgaatcag cgccgcatcc gccttgccca
     2101 gggcctgccc ggcgaccgcg gccgcccggg ccggatcgac ccggttgccg cccgccgtca
     2161 aaaatagcac gacatgaccg ctctcctcgc cgcgaaagat gaccgatttc gcgatctggt
     2221 cgataccgca gcccgccgcc cgcgccgcct cggccgcggt gcgggtagat tcgcccattt
     2281 cgacgatctc gaccggcgcg cccgccgcca ccagcgcggc gcgcacgcgg ttcaggctct
     2341 tgctcacgcc gccctccgct tctctgttgt ccaaataccc acaaccgcgc cgccggggaa
     2401 cccggcccga gaaggcgcgt tcggccacac ctatccacga gcgcccggca tggaccagcc
     2461 cgtcaccccc tttgacctgc aacgcatgtt cctgggcgaa cagccgctgc tgttctatgc
     2521 cgaaatcctt gtgcggacgc tgatcatcta tgcctatacg ctggtcatga tccgctggat
     2581 cggcgggcgc ggcgtggcgc aattgtcgat ggtggaattc gtcctggtca tcgctctcgg
     2641 ctccgcggtg ggcgatgcga tgttctaccc cgatgtgccg ttgctggcgg cgatgctggt
     2701 gatcaccggc gtcatcggca tgaacaaggt tctggacctg ctgatcctgc gatccgacag
     2761 cgccaagcat atgatcgacg gccgcgcggt ggcgctggtc catgacgggc gcctgctgcc
     2821 cgaggggatg gatgcctgcg acatgggctc ggccgaaatc aaggccctgc tgcgccagaa
     2881 cggcgtgcgc aatctgggtg cggtcgaaca tgcctatctc gaaagcagcg gcgggctgtc
     2941 ggtatttcgc tttccgtcac cgcgccccgg cctgtcgctg gtgccgcccc attccgtggt
     3001 ccccgaccag cccggcgccg cgccgctgac cgatccggcc cttgcgccgg gcggcctgac
     3061 atgctgtgcc agatgcggcg cgatcgaggc ggcgcatgtc gccctgcccg acggcagatg
     3121 cggccattgc ggcggcaagg tctgggttgc gccggagacg ccaatggcag ggaccgagcg
     3181 atcatgaatg tctatacgct gctggtcgag gtcggacgca ggacgggcga cgggttgccc
     3241 ggcggcagcc ggggcgcggc gctggtctgc tatgcctctg gccgcaacga ggacgaggcc
     3301 gttcgcgaaa ccgtggcgat cctgaaacag gccgggatgg cgccgctgga cgtcaccggc
     3361 tatggcacgc gcgaggaaag gctggccgat ggtcacgaga tcgacgacga ggaacgcgcg
     3421 ctgatgaatc gcgcgcgcga cgaaaacgcg gtcatcatcg cccaggtgca gcccttcttc
     3481 gacgaggccc gcggatcgtc cgacgatgac tgagccgatc aaccgcccgt gtggcggttg
     3541 tggcgcgggc cgcgatggct tatttgcggg ggcgaaaccc aaaggtgccg catgtcgctg
     3601 aacccgatcc gcccctggcg caatatcgag cggcggaaat cccgccagat catggtcggc
     3661 aa
//
LOCUS       DTVW01000283            1025 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1360770, whole
            genome shotgun sequence.
ACCESSION   DTVW01000283 DTVW01000000
VERSION     DTVW01000283.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1025)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1025)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1025
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1360770"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(155..952)
                     /locus_tag="EYO87_03780"
     CDS             complement(155..952)
                     /locus_tag="EYO87_03780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014247642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HIC65113.1"
                     /translation="MPDSLTDAARAVITEPGPAAKVALTRRFAAAWARGDIAGVGRTP
                     LPDRPARPAAPELRPPRDMAKRNPRSEAGRVAFLHAISHIELNAIDLAWDIVGRFTAE
                     DLPRAFYDDWVGVAKDEAEHFDLLSRRLGELGAAYGDLPAHDGLWEAATSTNDDLLAR
                     LALVPMVLEARGLDTTPTAVRRLRDAGDGASADILEIIGVEEIPHVAAGVRWFEFICA
                     KRGLDPVPAFRRLVAERFQVSLKPPFNETARGEAGFSSRYYQPLVER"
BASE COUNT          156 a          326 c          367 g          176 t
ORIGIN      
        1 ccgttttcac cgttttgcgg tgcatcttcc ggggcgtcgt cgccattgtt ttcgtcggcg
       61 ggctcttcgc tcatgaattt ctccatttca gtcggacgat ttcagggtaa cgcagtcggt
      121 ggaaggcggg aagactccaa tgcgtggatc gtggtcaacg ttccaccagc ggttggtagt
      181 atcgcgatga aaatccggcc tcgccgcggg cggtttcgtt gaatggcggc ttcaggctga
      241 cctggaagcg ttcggcgacg aggcggcgaa aggccgggac aggatcgagc ccgcgtttgg
      301 cgcaaataaa ctcgaaccag cgcacaccgg cggcgacgtg gggaatttcc tccaccccga
      361 tgatctccag aatatcggcg ctggccccgt cgccggcgtc gcgcaaacgg cggaccgccg
      421 tcggcgtggt gtccaggccg cgggcctcca gcaccatcgg caccagggcc aggcgcgcca
      481 acaggtcgtc attggtgctt gtcgcggcct cccataaccc gtcatgggcg ggaagatcgc
      541 cataggccgc gccgagctcg ccgagccgcc gggacaacag gtcgaagtgt tcggcttcgt
      601 ccttggcgac gccgacccaa tcgtcgtaaa aggcgcgcgg caggtcttcg gcggtgaagc
      661 gcccgacaat gtcccaggcc agatcgatgg cgttcagttc gatatggctg atggcatgga
      721 gaaaggcgac gcgcccggcc tcgctgcgcg gattgcgttt cgccatgtcg cggggcgggc
      781 gcaattccgg cgccgccggc cgcgccgggc gatcgggcag gggggtccgg ccgacgccgg
      841 cgatgtcgcc gcgcgcccag gcggcggcga agcgccgggt caacgccacc ttggccgccg
      901 ggccgggctc ggtgatgacg gcgcgggcgg cgtcggtcag gctgtcaggc atcggcgggg
      961 cggccttata gggcctggac cgcgctcaac acggcgtcgg cgtggccctt gaccttgacc
     1021 ttgcg
//
LOCUS       DTVW01000284            1334 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1361852, whole
            genome shotgun sequence.
ACCESSION   DTVW01000284 DTVW01000000
VERSION     DTVW01000284.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1334)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1334)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1334
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1361852"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..544
                     /locus_tag="EYO87_03785"
     CDS             <1..544
                     /locus_tag="EYO87_03785"
                     /inference="COORDINATES: protein motif:HMM:PF00682.17"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hydroxymethylglutaryl-CoA lyase"
                     /protein_id="HIC65114.1"
                     /translation="ALAAVASEAGRDVTAVIATAYGCPFEGEISEARVAAMAKAVIAA
                     GAGQVVLADTIGVAAPADIRRVHRAMAPVLGGTGWGVHLHNTRGTGMANLIAAIELGA
                     EVADTSIGGLGGCPFAPRATGNIATEDANYLLTRQGMATGLSHDRLAAQIDWLDQRVP
                     GRVTGQMSRAGWFGAAEGAA"
     gene            541..>1334
                     /locus_tag="EYO87_03790"
     CDS             541..>1334
                     /locus_tag="EYO87_03790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009210397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HIC65115.1"
                     /translation="MIEPLIVLVTLLALIAIGAPIFLALGAAGMIGLYMARGSMALFF
                     GPSSLFAQLNSFELLALPLFVLMGNFLSATPVGANLYRAAALWFNRLRGGLAIATVGA
                     STVFGAVSGVSIAGVAAIGSIAVPEMLARGYSHRLAAGAVVSSGALAMLIPPSVPLII
                     YGAVSGVSVADLFIGGIVPGVILAMALAGYIWIRASLNPSEAPRETEATHWGARLRSL
                     GGLWHAALLVLLVLGVIYSGVATPSEAGAFGALGALALAALVFRSLT"
BASE COUNT          159 a          426 c          485 g          264 t
ORIGIN      
        1 ggcgctcgcg gccgtcgcca gcgaggccgg gcgcgatgtg acagccgtca tcgccaccgc
       61 ctacggttgc cccttcgagg gcgagatatc cgaggcccgc gttgccgcca tggcaaaggc
      121 cgtgatcgcg gccggcgcag ggcaggtggt gctggccgac acgatcggcg tcgccgcccc
      181 ggcggatatc cgacgggtcc atcgcgcgat ggctccggtt ctgggcggca cgggctgggg
      241 cgtgcatctg cacaataccc gcgggaccgg tatggcgaac ctgatcgcgg cgatcgaact
      301 gggcgccgag gttgcagaca catccatcgg cggcctgggc ggctgtccct tcgcgccgcg
      361 cgcaaccggc aatatcgcga ccgaggatgc gaattatctg ctgacgcggc aaggcatggc
      421 gacgggtctg tcgcatgacc ggctggccgc gcagatcgac tggctggatc agcgtgttcc
      481 ggggcgcgtg accgggcaga tgtctcgcgc cggctggttc ggcgccgccg agggcgccgc
      541 atgatcgaac cgctgatcgt tctggtcacc cttctggcgt tgatcgccat cggcgccccg
      601 atctttctgg ctcttggtgc ggccgggatg atcggactct atatggcgcg cgggtcgatg
      661 gcgctgttct tcgggcccag ttcgcttttc gcgcagctga acagctttga actgctggct
      721 ctgccgctgt tcgtgctgat gggaaatttc ctgtcggcaa cgccggtcgg ggccaatctc
      781 taccgtgcgg cggcgctgtg gttcaaccgc cttcgcggcg gactggcgat cgcgaccgtc
      841 ggcgcctcga cggtgttcgg cgcggtctcg ggggtctcga tcgcaggggt cgcggccatt
      901 ggatcgatcg ccgttccgga aatgcttgcg cgcggctatt cgcatcggct tgcggccggg
      961 gcggtcgtca gttcgggcgc gcttgccatg ctgatcccgc ccagtgtccc gctgatcatc
     1021 tatggcgccg tctccggcgt ctcggtcgcg gatcttttca ttggcgggat cgtgccgggg
     1081 gtgatcctgg cgatggccct ggcgggatat atctggatcc gcgccagttt gaatccgtcc
     1141 gaggcgccgc gggaaaccga agccacgcac tggggggcac gcctgcgttc gcttggcggc
     1201 ttgtggcacg cggctttgct ggtgcttctg gttctgggcg tcatctattc cggcgtcgcc
     1261 acgccaagcg aggcgggcgc ctttggcgcc ctgggcgcgc tggcgctggc ggcgctggtg
     1321 tttcgcagcc tgac
//
LOCUS       DTVW01000285            2009 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1361855, whole
            genome shotgun sequence.
ACCESSION   DTVW01000285 DTVW01000000
VERSION     DTVW01000285.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2009)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2009)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2009
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1361855"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            108..515
                     /locus_tag="EYO87_03795"
     CDS             108..515
                     /locus_tag="EYO87_03795"
                     /inference="COORDINATES: protein motif:HMM:PF04940.10"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BLUF domain-containing protein"
                     /protein_id="HIC65116.1"
                     /translation="MSEGLEYSLYRSTASRALRAGELEDILAAARARNQAMSLTGCLH
                     YEDGLFFQWLEGPADALREVLGSILRDDRHRDIAVLVEGALEHRRFQDWRMRFSDRDR
                     ASLLDWLASAEVSTMDRRDYAAAVMSFLQSVEA"
     gene            605..>2009
                     /gene="rmuC"
                     /locus_tag="EYO87_03800"
     CDS             605..>2009
                     /gene="rmuC"
                     /locus_tag="EYO87_03800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017997878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA recombination protein RmuC"
                     /protein_id="HIC65117.1"
                     /translation="MPQDFSARIIAWSGDLQTVQALLALLAVGLLMLVVLALRLRRAL
                     SAGGARETALQSRLQDADGRVHALELQIGQHEVRAETQRARLGELAEERDGLTDALHQ
                     ARQEIAQMRTQLAETRLAAQKDHESATREIAALRELREEMTGQFRLLAAETLRVQQTD
                     MQKAQGEQLSALLTPFRDQVHRFQSELQVRNKVLDEEGARLREQIAFLHQRSEDISRE
                     AVNLTRALKGEKQRQGAWGEMVLERILEESGLASGIHYDIQNSWTDEDGRRWRPDVVV
                     RMPREKIMVIDSKVSLNDYEVAVNSDDPAQADAALRRHVAAIRAHVTTLGEKGYHRMN
                     DASVDYVLMFIPIEGAFSEALRADPGLARFAMERRVGLTTPTTLMLTLRTVEHIWAVE
                     RRETNAMEIAKRAGALYDKVAGFVEAMEGVGKALDQAGRAHGQALDRLSRGPGNVIRQ
                     VEMLRELGARNQKQIGLD"
BASE COUNT          363 a          625 c          688 g          333 t
ORIGIN      
        1 gcgtcacccg cgagcgcatc cgccagatcg aggccaaggc gctgcgcaag ctgaagcacc
       61 cctcgcgcag ccgcaagctt cggtcctttc tcgatcagta acccgtcatg tcggaaggac
      121 tggaatattc gctgtatcgc agcaccgcca gtcgcgcgct tcgggcgggc gaacttgagg
      181 acattcttgc cgccgcccgc gcgcgcaacc aggcgatgtc gctgacgggc tgtctgcact
      241 acgaggatgg gctgttcttt caatggctcg aaggaccggc ggatgcgctg cgcgaagttc
      301 tgggttcgat cctgcgtgac gaccggcacc gagatatagc ggtgctggtg gagggcgcgc
      361 tggaacatcg gcgctttcag gactggcgga tgaggttttc cgatcgcgac cgggcctcgc
      421 ttctggattg gcttgccagc gccgaggtct cgaccatgga ccgccgggat tatgccgccg
      481 cagtgatgtc gtttctgcaa tcggtcgagg cctgacagcg gtgtcctgac aacggcgccc
      541 ggatgggttg tgtcgcggca caaaaagtga acactaagcc cgacgcgcag caatcggagc
      601 cttcatgccg caggattttt ccgcccggat catcgcatgg tccggcgatc tccagaccgt
      661 ccaggccctg ctggccctgc ttgccgtcgg attgctgatg ctggtcgtcc tggcgctgcg
      721 cctgcgtcgc gccttgtcgg cgggcggggc acgcgagacg gcgctgcaat ccagactgca
      781 agacgccgat ggccgggttc acgcgctgga attgcagatc ggccagcacg aggtccgtgc
      841 cgagacgcag cgggcgcgct tgggcgaact ggcggaggaa cgcgacgggc tgaccgacgc
      901 gctgcaccag gcccggcagg agatcgcgca gatgcgcacg caattggccg aaacccggct
      961 ggcggcgcag aaggatcacg aatccgccac gcgcgagatt gcggcgctgc gcgagctgcg
     1021 cgaggaaatg accggccagt tcaggctgct ggcggccgaa accctgcgcg tgcagcaaac
     1081 cgacatgcag aaggcgcagg gcgaacagct ttccgcgctg ctgaccccgt ttcgcgacca
     1141 ggtgcaccgt ttccaatcgg aattgcaggt ccgcaacaag gttctggacg aggagggcgc
     1201 gcgtctgcgc gaacagatcg ccttcctgca tcagcggtcc gaggacatct cgcgcgaggc
     1261 ggtcaacctg acccgcgcgc tgaagggcga gaagcagcgt caaggcgcct ggggcgagat
     1321 ggtgctggag agaattctcg aggaatccgg gcttgcatcc ggtattcact acgacattca
     1381 gaacagctgg accgacgagg atggccggcg ctggcgcccc gacgtggtag tcaggatgcc
     1441 gcgcgaaaag atcatggtga tcgacagcaa ggtgtcgctc aacgattacg aggtcgcggt
     1501 gaattccgac gatcccgccc aggcggatgc cgccctgcgt cgccatgtgg ccgcgatccg
     1561 tgcccatgtc accacactgg gcgagaaggg ctatcaccga atgaacgatg cttcggtcga
     1621 ctacgtgctg atgttcatcc cgatcgaggg cgcgttttcc gaggctttgc gcgccgatcc
     1681 gggcctggcc cgcttcgcga tggaacgccg ggtcggcctg accacgccca ccacgctgat
     1741 gttgaccctg cgcacggtcg aacatatctg ggccgtcgag cgtcgcgaaa ccaacgccat
     1801 ggagatcgcg aaacgggccg gcgcgcttta tgacaaggtg gccggtttcg tcgaggcgat
     1861 ggaaggggtc ggcaaggcgc tggaccaggc cggccgcgcg catggccagg cgctggaccg
     1921 tctgtcgcgc gggcccggca atgtcatccg ccaggtcgag atgctgcgcg aactgggcgc
     1981 gcgcaaccag aaacagatcg gtctggacc
//
LOCUS       DTVW01000286            1233 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1362222, whole
            genome shotgun sequence.
ACCESSION   DTVW01000286 DTVW01000000
VERSION     DTVW01000286.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1233)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1233)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1233
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1362222"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..487
                     /locus_tag="EYO87_03805"
     CDS             <1..487
                     /locus_tag="EYO87_03805"
                     /EC_number="5.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352299.1"
                     /note="catalyzes the formation of
                     5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l-
                     (5-hosphoribosyl)imidazole-4-carboxamide from
                     1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]
                     imidazole-4-carboxamide; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="1-(5-phosphoribosyl)-5-((5-
                     phosphoribosylamino)methylideneamino)imidazole-4-
                     carboxamide isomerase"
                     /protein_id="HIC65118.1"
                     /translation="QLGGGIRDMATIETWLNRGLRRVILGTVAVENPDLVREAADAFP
                     GRIAVGIDARAGRVATRGWATETAVSATDLANRFEDAGVAAIIYTDIDRDGAMGGPNL
                     AATEALARAVNIPVIASGGVASLADLQALAGTRVIAGAISGRALYDGALDLGAALAAL
                     R"
     gene            441..>1233
                     /locus_tag="EYO87_03810"
     CDS             441..>1233
                     /locus_tag="EYO87_03810"
                     /inference="COORDINATES: protein motif:HMM:PF13454.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD/NAD(P)-binding protein"
                     /protein_id="HIC65119.1"
                     /translation="MTGRWIWARRWRPCADATWRRQPGLPAARCAARQEMERQDMTTG
                     TETCRIAVIGAGPRALGALEALIRHDRDAAFRIEIFDPRPWPGAGPNFSPDQSGLCKL
                     NLPLRSIDLGRAPWDGADFAEGTGGPAAAERFPARAELGGYLAARLARLMARTGIAVT
                     PRRITGIRRRDEAWFLEDGALRHGPYDEVLLAQGQPATMPDKQLKTWRDHAERHGLDL
                     VAAYPDHRLLRQAQNWAGKPVGVRGLGLSTLDVVRLLTLGLGGRFA"
BASE COUNT          173 a          408 c          458 g          194 t
ORIGIN      
        1 ccagctgggc ggcggcatcc gcgacatggc caccatcgaa acctggctga atcgcggtct
       61 gaggcgggtg attctgggca ccgtcgcggt cgagaatccc gatctcgtgc gcgaggcggc
      121 ggatgccttt ccgggccgga tcgccgtcgg catcgacgcc cgcgccggcc gtgtggcgac
      181 gcgcggctgg gccaccgaaa ccgccgtcag cgcgaccgat ctggccaatc gcttcgagga
      241 cgcgggcgtg gctgcgatca tctataccga cattgaccgc gacggcgcga tgggtgggcc
      301 caacctggcc gcgaccgagg cattggcgcg ggcggtcaac attcctgtca ttgcctcggg
      361 cggggttgct tcgctggcgg atttgcaggc tctggccgga acgcgggtga tcgcgggcgc
      421 gatttcggga cgcgcgcttt atgacggggc gctggatctg ggcgcggcgc tggcggccct
      481 gcgctgacgc cacatggcgc cggcaacccg gcctgcccgc cgcgcgttgt gccgcgaggc
      541 aggaaatgga acggcaggac atgacgaccg gaaccgaaac atgccggatc gcggtgatcg
      601 gcgcgggtcc gcgcgccctt ggcgcgcttg aggcgctgat ccgccacgac cgggacgcgg
      661 cctttcgaat cgagattttc gacccccgtc cctggcccgg cgccgggccg aatttcagcc
      721 cggatcaaag cggtctttgc aagctgaacc tgcctctgcg atcgattgat ctgggccgcg
      781 cgccctggga cggagctgat ttcgcggaag gaacgggcgg cccggcagcg gccgaacgct
      841 ttccggcgcg ggccgaactg ggcggttatc tggccgcgcg gctggcacgg ctgatggcgc
      901 ggaccgggat cgctgtcacg ccgcgccgga tcaccggcat ccggcgccgc gacgaggcct
      961 ggtttctgga ggatggcgcg ttgcgtcacg gcccctatga cgaggtgctg ctggcgcagg
     1021 gccagcccgc cacgatgccc gacaaacagt tgaagacatg gcgcgatcat gccgaacggc
     1081 acggccttga cctggtcgcg gcctatcccg atcaccggct gctgcgtcag gcgcagaact
     1141 gggccggcaa gcccgtcggc gtgcgtggtc tcggcctgtc gacgctggac gtggtgcggc
     1201 tgctgacgct gggcctgggc ggacgcttcg ccg
//
LOCUS       DTVW01000287            1369 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1362447, whole
            genome shotgun sequence.
ACCESSION   DTVW01000287 DTVW01000000
VERSION     DTVW01000287.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1369)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1369)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1369
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1362447"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(1..91)
                     /locus_tag="EYO87_03815"
                     /pseudo
     CDS             complement(1..91)
                     /locus_tag="EYO87_03815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008100251.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(241..663)
                     /locus_tag="EYO87_03820"
     CDS             complement(241..663)
                     /locus_tag="EYO87_03820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007425723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PaaI family thioesterase"
                     /protein_id="HIC65120.1"
                     /translation="MTDAPGTIRDETGTQRTLGYVLDVGQGDGRARCTLTLDERHTNR
                     HGVLHGGLVSVMLDNAMGATGSLAVDDSGLYPMLTISMTTNFLASARVGDTLTATGWV
                     TGGGRRIKFIDGEIRDAGGTVIATATGVFKPLPKERMA"
     gene            complement(660..>1369)
                     /locus_tag="EYO87_03825"
     CDS             complement(660..>1369)
                     /locus_tag="EYO87_03825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017928479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="pimeloyl-CoA dehydrogenase small subunit"
                     /protein_id="HIC65121.1"
                     /translation="EAGVPVVPGFADPVTNGAEADLLVVSARTGGEVGDTDGISLFLV
                     PKDTDGLDIRDYPLAGGGRGAEIVMEDVRLPADALLGEKGGAFGAIEHANARGVCALT
                     AEALGLMERARKLTADYLAQRTQFGQPIGKFQALQFRMADLIIEIEQSRSAVINLAGH
                     LDDARDDRELHVSATKQLVGQTAKLVVEESIQLHGGIGMTMEYDLGHFARRLTMTDHR
                     LGDALYHLGRFTRLRAA"
BASE COUNT          202 a          477 c          468 g          222 t
ORIGIN      
        1 cgatacggcc ccagttgggg tcgcttccat accatgatgt tttgaccaac agggaattcc
       61 cgatggctcg ggcgatgcgc tccgagatgc ggaacatcag gcggcggtac accagcacat
      121 acaggcgcgg atcgcaggcg tcccgcaccg cggcatagta gcccggcgtc agcgcgttgc
      181 gcttgccggg gttgtcgttc cagacgatca ccgcgtgatg ctcccgctcg atgcgcgcgc
      241 tcatgccatc cgttccttgg gcagcggctt gaacacgccg gtggcggtgg cgatgacggt
      301 gccgccagcg tcgcggatct cgccgtcgat gaacttgatc ctgcggccgc cgccggtgac
      361 ccagcccgtg gcggtcagcg tgtcgcccac gcgcgcggac gccaggaagt tggtcgtcat
      421 cgaaatcgtc agcatcggat agagcccgct gtcgtcgacc gccagcgagc ccgtggcgcc
      481 catggcgttg tccagcatca ccgacaccag cccgccgtgg agcaccccat ggcggttggt
      541 gtggcgctca tccagggtca gggtgcagcg cgcgcgcccg tcgccctggc cgacatcgag
      601 cacgtagccc aaggtgcgct gggtgccggt ctcgtcgcgg atggtgccag gcgcatcggt
      661 catgccgcgc gcagccgggt gaaccggccc agatggtaga gcgcgtcgcc caggcggtgg
      721 tcggtcatgg tcaggcgccg ggcgaaatgg cccaggtcgt attccatggt catgccgatc
      781 ccgccgtgga gctggatcga ctcctccacc accagcttgg cggtctggcc cacgagctgc
      841 ttggtggccg acacgtggag ctcgcggtcg tcgcgcgcgt cgtcgagatg cccggcgagg
      901 ttgatgacgg cggaccgcga ctgctcgatc tcgatgatga gatccgccat ccggaactgg
      961 agcgcctgga acttcccgat cggctgaccg aactgggtgc gctgcgcaag gtaatccgcc
     1021 gtcagcttgc gcgcgcgttc catcaggccc agcgcctcgg cggtcagcgc gcagaccccg
     1081 cgtgcgttgg cgtgctcgat cgccccgaag gcgccgccct tctcgccgag cagcgcatct
     1141 gcgggcaggc ggacgtcctc catgacgatc tcggcgccgc gtccgccccc cgccagggga
     1201 tagtcgcgga tgtcgagccc gtcggtgtcc ttcggcacca gaaacagcga gattccgtcg
     1261 gtgtcgccga cctctccacc ggtccgggcc gagaccacca gcaggtcggc ctcggcgccg
     1321 ttggtcaccg gatcggcgaa accgggaacc accgggaccc cggcctccc
//
LOCUS       DTVW01000288            2103 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1363832, whole
            genome shotgun sequence.
ACCESSION   DTVW01000288 DTVW01000000
VERSION     DTVW01000288.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2103)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2103)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2103
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1363832"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            14..310
                     /locus_tag="EYO87_03830"
     CDS             14..310
                     /locus_tag="EYO87_03830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008232406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65122.1"
                     /translation="MRAGSARSACKGGIVVKLRLTETGVEVAAEDLAPLLELDPSDLR
                     RQMRDGAVTTRYEVGQDADAGRFRVTFQSADWRVRFTCASDGTVLKRLRNRRGG"
     gene            343..1014
                     /locus_tag="EYO87_03835"
     CDS             343..1014
                     /locus_tag="EYO87_03835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012495117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NnrU family protein"
                     /protein_id="HIC65123.1"
                     /translation="MTGWIEFAAAIAVFFLSHSLPLRPAVRARGVEYLGRGGFGLLYS
                     ALSIAALAWMIGAAGRAPFVQLWPRQTWQTLVPLIAMALACLIAAFSIARPNPFSFGG
                     GSSGFDPARPGIVRWLRHPMLAALALWAASHMVPNGDLAHVLLFGIFAAFAVLGMRLV
                     DRRKQRQMGVAQWAALRRAAGTGPFVPRPVSSAHAAIRFGIAAALYVTLIVLHPVVIG
                     VSPLP"
     gene            1242..1964
                     /locus_tag="EYO87_03840"
     CDS             1242..1964
                     /locus_tag="EYO87_03840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013897064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HIC65124.1"
                     /translation="MRMDIHNADVPVLCRACEARHRGICGALDAPELLRLGRTSSRHE
                     YGAGTTLVAAGERPEHCSNILSGVVKLSKLLPDGRQQVVELQFAPDFLGRPFGGESDV
                     LVEAATDVRLCSFPLDMLQTMMAGSAAFETRMHRQALRQLDDARDWMMTLGRKNAAEK
                     VASFLLMLSRHVRPQQEGYSTSFALPMGRSDIADFLGLTTETVSRQLTRLRKDGAIAI
                     ERTRHVEVLDLDELKEVAAGGT"
BASE COUNT          337 a          642 c          727 g          397 t
ORIGIN      
        1 tcaccctggc cgattgcgcg ctggatccgc gcggtcggcc tgtaaaggag gcattgtcgt
       61 gaagctgagg ctgaccgaaa cgggcgtcga agtcgccgcg gaagaccttg ccccgcttct
      121 ggaactggat ccgtccgatc tgcgccgtca gatgcgcgac ggagcggtga caacccggta
      181 cgaggtcggc caggacgcgg atgcgggccg gttccgtgtc acctttcaat ccgccgattg
      241 gcgggtcagg ttcacatgcg ccagcgatgg aaccgtgctg aaacgactgc gcaacaggcg
      301 cggcggatga tgtcgtccgg gacagcggct gcatccgaag tcatgacagg ctggatcgaa
      361 ttcgccgccg cgatcgcggt gttctttctc agccattcgc tgccgttgcg tccggccgtc
      421 cgcgcgcgtg gcgtcgaata tctgggccgc ggcggctttg gcctgctgta ttcggcgctg
      481 tcgattgcgg cgctggcctg gatgatcggc gccgcgggtc gcgcgccctt cgtgcagctt
      541 tggccgcggc agacctggca aaccctggtg ccgttgatcg cgatggcact ggcatgcctg
      601 attgccgcct tctccatcgc ccggcccaat cccttttcct tcggcggcgg gtcttcgggt
      661 ttcgatcccg ccaggccggg gatcgtgcgc tggctgcggc accccatgct ggcggcgctg
      721 gcattgtggg ctgcaagcca catggtgccc aacggcgatc tggcgcatgt cctgcttttc
      781 ggcatattcg cggccttcgc cgttctggga atgcgcctcg tggaccggcg caagcagcgc
      841 cagatgggtg tcgcgcagtg ggccgcgctg cgacgcgcgg cagggaccgg acccttcgtg
      901 ccgcgtcctg tctcgtccgc ccatgccgcg atccgctttg ggatcgcggc ggctctgtat
      961 gtgacgctga tcgtgttgca tccggtggtg ataggcgtgt cgcctctgcc ctgacaggga
     1021 tcggtctggc cgtttgcgcg aaaagatgcg tttccgaaag acctgtctgc cgcgcaggat
     1081 tgcagaattg cgcccgtgga tgtcgggtga cgctggtgcc gtgcggcggg aaggttgcat
     1141 agagaatggc aggcgaataa attgacatcc atgataccga tttacggcgg cccgtgacgc
     1201 cgtagaatga cagggacggt cgaggacgga cggagcgaca tatgcgcatg gacattcaca
     1261 acgccgacgt ccccgtgctg tgtcgcgcct gcgaagcacg gcatcgcgga atctgtggcg
     1321 cgcttgatgc gccggaactg ttgcggctgg gtcggaccag cagcagacac gaatacggtg
     1381 ccggaacgac ccttgtcgcc gccggggaac gccccgaaca ttgttcgaac atcctcagcg
     1441 gagtcgtgaa gctttccaag cttctgcccg acgggcgcca gcaggtcgtc gagttgcagt
     1501 tcgcgccgga ttttctgggc cggccgttcg gcggcgaaag cgatgtcctg gtcgaggcgg
     1561 cgaccgatgt gcggctgtgc tcgttcccgc tcgacatgct tcagacgatg atggccgggt
     1621 cggcggcctt cgagacgcgg atgcatcgcc aggcgctgcg tcagctggac gatgcccgcg
     1681 actggatgat gacgctgggt cgcaagaacg cggccgagaa ggtggcctcg ttcctgctga
     1741 tgctttcgcg ccatgtccgt cctcagcaag aggggtattc aacctccttc gcgctgccga
     1801 tggggcgatc ggacatcgcc gattttctcg gcctgacgac cgagacggtc agccgccaat
     1861 tgaccaggtt gcgaaaggac ggcgccatcg cgattgaaag aacgcggcat gtcgaggttc
     1921 tggacctgga cgaattgaaa gaggtcgcgg cgggcggaac ctagtcgcgc cgcgacagcg
     1981 cctgccggta gagaggcagg atcacgtccc gatcgaaagc cgagtgccgc atcagcggcc
     2041 ggaacaggcc gcgcaggaga tagccgagct gatcggcctc cgcatgtctc cgcgaccgga
     2101 cga
//
LOCUS       DTVW01000289            1824 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1364185, whole
            genome shotgun sequence.
ACCESSION   DTVW01000289 DTVW01000000
VERSION     DTVW01000289.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1824)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1824)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1824
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1364185"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            138..548
                     /locus_tag="EYO87_03845"
     CDS             138..548
                     /locus_tag="EYO87_03845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020039403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HIC65125.1"
                     /translation="MKIMHSGRAPSGPGPENYFTGQVRIDPLFQAEPPGRAVGAHVTF
                     EPGARTAWHTHPAGQTLIVTFGRGLAARDGGPVEEIRQGDVVWIPAGEKHWHGAAPDT
                     AMSHIAIQEAVDGSAVTWLEKVTETEYDGRSASG"
     gene            complement(603..809)
                     /locus_tag="EYO87_03850"
     CDS             complement(603..809)
                     /locus_tag="EYO87_03850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_353462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HIC65126.1"
                     /translation="MATGTVKWFNATKGYGFIAPDDGGKDIFVHISAVERAGLTGLKD
                     NQKIAYELQSGRDGRASASDLKLL"
     gene            complement(1017..>1824)
                     /locus_tag="EYO87_03855"
     CDS             complement(1017..>1824)
                     /locus_tag="EYO87_03855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008883688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="threonine--tRNA ligase"
                     /protein_id="HIC65127.1"
                     /translation="HGIMRVRGFTQDDAHIFCTEDQIEAETKKFIEFLARIYADLGFA
                     DWTIKLSTRPEKRIGSDESWDRAEAALGNACIAAGHDYTLFPGEGAFYGPKLEFVLTD
                     AIGRDWQCGTLQVDPNLPERLDAEYVGQDGAKHRPIMLHRAVLGSFERFIGILIENSA
                     GKLPLWLAPRQVVVASIVSDADDYVHEVVETLRAAGLRAEADTRNEKINYKIREHSVA
                     KVPAILAIGMKEVEDRTVSIRRLDQQGSKSLSLEQAAEMLKTEATPPDLR"
BASE COUNT          323 a          578 c          574 g          349 t
ORIGIN      
        1 ccctgcggga ggttccgatg atagggctgg cgcgaccgac ctgcaactcg gcccatggcg
       61 gacttgatcc gtgggggcaa gaaccgagct tgccattgcc gacaggccca tgtcaccctg
      121 cgccagagga ggccgccatg aagatcatgc attcgggccg cgcgccatcg gggcccggcc
      181 ccgaaaacta cttcaccggt caggtgcgga tcgatccgct gtttcaggcc gagcctccgg
      241 gacgcgcggt gggcgcccat gtcaccttcg agcccggcgc ccgcaccgcc tggcacacgc
      301 atccggccgg gcagaccctg atcgtcacgt tcgggcgtgg actggccgcc cgcgatggcg
      361 ggccggtcga ggagatccgt cagggcgatg tcgtctggat tccggctggc gagaaacact
      421 ggcacggcgc cgcgcccgat accgcgatga gccatatcgc cattcaggaa gccgtcgatg
      481 gcagtgcggt gacatggctg gagaaggtga ccgaaaccga atatgacggc cggtccgcaa
      541 gcgggtgaca caaaagaacg gcccgcgcga agcgggccgt gaatgccgag gatcccctgg
      601 gatcagagca gtttgagatc gctggccgat gcgcggccgt cgcggcccga ttgcagttcg
      661 tatgcgattt tctggttgtc cttgaggccc gtcagcccgg cgcgttccac cgccgagatg
      721 tggacgaaga tgtccttgcc gccatcatcg ggggcgatga agccatagcc cttggtggcg
      781 ttgaaccatt tcaccgttcc ggtcgccata accgttctct ccttcaagtc atcccgacgc
      841 ccgattgcgc caggccgtgc agcccgcttt cggtattccg gctgcccatc gaaagggagg
      901 cggtagaaag tccttgctca cgcaggtttg aggatgaccg aatcgttaag aaacgcaagg
      961 ggtatcgcgc gcggaatcgt gtgccgcgcg tgaagtcccg gcgacattgg cgcatttcag
     1021 cgcagatccg gcggtgtggc ttcggtcttc aacatctcgg cggcctgttc cagtgacagg
     1081 gacttgctgc cctgctggtc cagacggcgg atcgagaccg tccgatcctc tacctctttc
     1141 atgccgatgg caagaatcgc gggcactttt gccaccgaat gttcgcggat cttgtagttg
     1201 atcttttcgt ttcgcgtatc cgcctcggcc cgcaatcccg ccgcgcgcag ggtttcgacc
     1261 acttcgtgga cgtaatcatc ggcgtccgag acgatcgagg cgacgacaac ctgacgcggc
     1321 gccagccaca gcggcagctt gccggcgctg ttttcgatca gaatgccgat gaatcgctcg
     1381 aaactgccca gcacggcgcg gtgcagcatg atcgggcgat gtttcgcgcc gtcctgtccg
     1441 acatattccg catccagccg ctctggcagg ttcggatcca cctgcaaagt gccgcattgc
     1501 cagtcgcgac cgatggcatc ggtcagcacg aattccagct ttggcccgta gaaggcgcct
     1561 tcgccgggaa acagcgtgta atcatggccc gccgcgatgc aggcattacc aagcgcggcc
     1621 tcggcccggt cccagctttc gtccgagccg atgcgctttt cggggcgggt ggacagcttt
     1681 atggtccagt cggcgaagcc cagatcggcg tagattctgg ccagaaactc gatgaatttc
     1741 ttcgtttccg cctcgatctg atcctcggtg cagaagatat gcgcatcgtc ctgcgtgaaa
     1801 ccgcgcaccc gcatgatgcc atgc
//
LOCUS       DTVW01000290            4096 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1366953, whole
            genome shotgun sequence.
ACCESSION   DTVW01000290 DTVW01000000
VERSION     DTVW01000290.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 4096)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4096)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4096
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1366953"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..901)
                     /locus_tag="EYO87_03860"
     CDS             complement(<1..901)
                     /locus_tag="EYO87_03860"
                     /inference="COORDINATES: protein motif:HMM:PF04393.11"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF535 domain-containing protein"
                     /protein_id="HIC65128.1"
                     /translation="MSYSRALALVLRSMKDVAPADRPGHRRLRLKLCLAAARHGPALA
                     ALSATPSPALSRILEERPQTVAGLLVWPYLCAAWGVGERLRRIGAHYRIVDRLGAPLP
                     FAADQRLVLADLSDLWPGLAVVLDQPPWFMREGGLTISLFVADFRAYSLAFSFTEAAG
                     DGGIDCLIGALQGRQDDAAADLYRDLTRAAHGLRPRDLLIEIGRILCRHWQVRALFAV
                     ADDYRHHRHPFFGTKTQAMQDYDAIWRDRGGVRENAHFFRLALQSERRADEAIKPNKR
                     SLYRRRYRFLDRLEDEIRANLPAL"
     gene            complement(1027..2004)
                     /locus_tag="EYO87_03865"
     CDS             complement(1027..2004)
                     /locus_tag="EYO87_03865"
                     /inference="COORDINATES: protein motif:HMM:PF13641.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HIC65129.1"
                     /translation="MSSIAVIIVNYGTADLSIAGVDSVLARGHGDHRVEIHLLDNASP
                     GGDGARLAQAHRARGWGGRVSLWQERTNHGFGRANNLVIRALAGRDEAPDYIFLLNPD
                     ARLQNEALSILADHLDRHPAAAAAGAGIALPSGVPVTAAFRFPSMLSEFVQAVNLGAL
                     SRLCRSRLVPLPADHPEGPVDWVSGAAVMMRLPVIAALGGFDPDFFLYYEEVELMHRI
                     RRAGHRIDYVPAARVIHAEGAATDVRSSRPDRVARPAYWYDSWRLYHLKTRGRAGALA
                     AGLGWLGGALLNALLALPRGQRLKAPKGFLRDFPRRVLWPLIRGGQGAP"
     gene            complement(2125..3087)
                     /locus_tag="EYO87_03870"
     CDS             complement(2125..3087)
                     /locus_tag="EYO87_03870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001033804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RepB family plasmid replication initiator
                     protein"
                     /protein_id="HIC65130.1"
                     /translation="MQDFFVCDFLAPVPKHDLASMEHPIFSLSTRPDRRVVSYDHNGA
                     TLTVTPSVKGRATIFDADILIFCISQLMAALNAGRAVSRKLTLTAHDLLQATNRETSG
                     DGYKRLRDAFERLAGTRITTNIVTGEQEITSGFGLIEAWEIVRRTRAGRMVAVSITLS
                     DWLFQAVLSRSVLTLSRDYFRMRKPLERRIYELARKHCGRQPEWQISVAVLAKKTGST
                     SPVRVFRAMLRQMIRENRLPDYLLAEAPGDILRVTPRALVLEPGAGPHLSPETLERAR
                     ALRPGADVHALAAQWRGWWASSGRKRLRDADKAFLGWLARTRQQ"
     gene            3653..>4096
                     /locus_tag="EYO87_03875"
     CDS             3653..>4096
                     /locus_tag="EYO87_03875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017929929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome partitioning protein"
                     /protein_id="HIC65131.1"
                     /translation="MSGQDLPPYFNISPDRALSLLGEPTDTGGLARIAENYRRGRADL
                     TGRGLEENGDRRLRMFSTWEITKYLIPVAPQHFRRVLRARPDLPQGRSETGAGAKWFT
                     LDEVQRLRAHFGAEGSKSKEYLPYRPKDLPAKIVAVANFKGGVGKT"
BASE COUNT          666 a         1428 c         1417 g          585 t
ORIGIN      
        1 ccagcgccgg caggttcgcg cggatttcgt cttccagccg gtccaggaac cggtagcgcc
       61 gccgatacag cgaccgcttg ttcggcttga tcgcctcatc cgcgcggcgt tccgattgca
      121 gggccaggcg aaagaaatgc gcgttctcgc gcaccccgcc ccggtcgcgc cagatggcgt
      181 cgtaatcctg catggcctgg gtcttggtgc cgaagaacgg atggcggtga tggcgataat
      241 catcggccac cgcgaacagg gcgcgcacct gccagtgccg gcacaggatc cggccgatct
      301 cgatcagcag atcgcgcggc cgcagcccgt gggcggccct ggtcagatcg cggtagagat
      361 cggcggccgc gtcatcctgg cgcccctgga gggcgccgat caggcaatcg atcccgccgt
      421 ccccggccgc ctcggtgaac gagaaggcca gcgaataggc ccggaaatcg gcgacgaaca
      481 ggctgatcgt cagcccgccc tcgcgcatga accagggcgg ctggtccagc accaccgcaa
      541 ggccgggcca gagatcggac agatcggcca ggaccaggcg ctgatcggcg gcgaagggca
      601 gcggcgcgcc cagccggtcc acgatccggt aatgcgcccc gatccgccgc agccgttccc
      661 cgacgcccca ggcggcgcag agatagggcc agaccagcag ccccgccacc gtttgcggac
      721 gctcctcgag gatccgcgac agggcggggg atggcgtcgc ggacagcgcc gccagggcgg
      781 gcccgtggcg ggccgcggcc aggcacagtt tcagccgcag cctgcgatgg ccgggccgat
      841 cggccggcgc cacgtccttc atgctgcgca gaacaagggc caaggcccgg ctgtaagaca
      901 tggtctgttc cctgccttcc cgcccgcccg gacgttccgg ccgcctgcca cactagcacg
      961 gcgccgcggc gatacgccat ggccatcgtc cggccggtcg cggcgcgcgg ggtcacggca
     1021 ccggggtcac ggcgccccct gcccgccgcg gatcagcggc cacaggacgc ggcggggaaa
     1081 atcgcgaaga aagccctttg gcgccttcag cctctgcccc cgcggcagcg ccagaagcgc
     1141 attcagcaac gcccccccca gccagcccag ccccgccgcc agggcgcccg cgcggccccg
     1201 ggtcttcaga tgatacagcc gccatgaatc gtaccaatag gccgggcgcg cgacgcggtc
     1261 ggggcggctg cttctgacat cggtcgcggc cccctcggca tggatcacgc gcgcggccgg
     1321 gacataatcg atccggtggc cggcgcggcg gatgcgatgc atcagttcga cctcttcgta
     1381 atagaggaag aaatccggat cgaacccgcc cagagccgcg atcaccggca ggcgcatcat
     1441 caccgccgcc ccgctgaccc aatcgaccgg gccttcgggg tgatcggccg gcagcggcac
     1501 caggcgggac cggcaaagcc gcgacagggc ccccagattc accgcctgga cgaattcgct
     1561 cagcatcgag ggaaagcgga aggccgccgt caccggcacg cccgagggca gcgcgatgcc
     1621 cgccccggcc gcggccgcgg ccgggtggcg gtccagatga tcggccagga tcgacagggc
     1681 ctcgttctgc agccgcgcat cgggattgag caggaagatg taatcgggcg cctcgtcgcg
     1741 gccggccagg gcgcggatga ccaggttgtt ggcgcggccg aagccgtgat tggtccgttc
     1801 ctgccacagg ctgacccgtc cgccccagcc ccgggcccga tgcgcctggg ccagccgcgc
     1861 cccgtcgccg cccggcgagg cattgtccag caggtgaatc tcgacccggt gatcgccatg
     1921 gccgcgcgcc agcacgctgt cgaccccggc aatcgacaga tcggccgtgc cgtaattgac
     1981 gatgatgacg gcgatgctgg acatggtcga aacgggcccc ctggcgatcc agtctgctgg
     2041 ttcgggcaga atccgccaaa aggcaagcgc ccatgggctc tgaaccgccg cccccgccgc
     2101 cttcgggctc ttttcccgcc gcgcctattg ctgccgggtc cgggccagcc agcccaggaa
     2161 cgccttgtcg gcatcgcgca gccgcttgcg ccccgaggag gcccaccagc cgcgccattg
     2221 cgcggccagg gcatggacat cggcgccggg acgcagggcg cgggcgcgct ccagcgtctc
     2281 gggcgacaga tgcgggcccg cgcccggttc caggaccagc gcgcgggggg tgacgcgcag
     2341 gatgtcgccc ggcgcctcgg ccagcaggta atcgggcagc cggttctcgc ggatcatctg
     2401 gcgcagcatg gcgcggaaga cccggaccgg gctggtcgag ccggtcttct tggccagcac
     2461 cgcgaccgag atctgccatt ccggctggcg gccgcaatgc ttgcgcgcca gttcgtagat
     2521 gcgccgctcc agcggttttc gcatgcgaaa gtaatcgcgg ctcagcgtca gcaccgaccg
     2581 cgacaggacc gcctggaaca gccagtccga cagggtgatg ctgaccgcca ccatccggcc
     2641 ggcgcgggtc ctgcgcacga tctcccaggc ctcgatcagg ccgaagccgg atgtgatctc
     2701 ctgctcgccg gtgacgatat tggtggtgat gcgggtgccg gccaggcgtt cgaaggcgtc
     2761 gcgcagccgc ttgtagccat cgcccgaggt ctcgcggttg gtggcctgca acaggtcatg
     2821 cgcggtcagg gtcagcttgc gcgacaccgc ccggcccgcg ttcagcgccg ccatcagctg
     2881 gctgatgcag aagatcagga tatcggcatc gaagatcgtc gcccggccct tgacgctggg
     2941 ggtgacggtc agggtggcgc cgttatggtc atagctgacc acccggcggt cggggcgcgt
     3001 ggacagcgag aagatcggat gttccatcga ggccaggtcg tgcttgggca cgggggccag
     3061 gaaatcgcag acgaagaaat cctgcatggc ggcgggcgcg cccgcctgcg gggctgtccc
     3121 cggttgcaag gatgcggcca tgcccctgcc cttcccgtcc cctgggccgg ccgggttttc
     3181 ccggtcgcgg ccacgctgct gctgcctctg gcgatccggg ccggcggcct tttcggtccc
     3241 ggccggattc gtcgtttcat tgacacccag cctacgtgtc cacagccgat gcgtccagcg
     3301 cgggggcgcg aaagcggcgg cccggatcgg gggatcggaa tcgccttgtc gggggatcgg
     3361 agtcgcatca tcgtgggatc ggaatcgccc cagcccccgc accggatgcg gaaaggccgc
     3421 aagatcagca gcttgcggta aatcctggca aggccggcag gtccgtaaca gataactaac
     3481 tggattctaa caaggcagga tcggcggaat tgccacagtt gcgcgaaccg aagccccgga
     3541 tttgcccaga aaacagcggc gatgttgcga tttgcatggc atgtatcgcg ttttcgcgta
     3601 tgatgcgtca aaagcgttac atcaaggcgc gggcatctct ttcggaggca tgatgagcgg
     3661 acaggacctt cctccctatt tcaacatctc gcccgaccgg gcgctgtcgc tgctgggcga
     3721 gccgaccgat accggggggc tggcacggat cgccgagaat taccgccgcg ggcgggccga
     3781 cctgaccggg cgcgggctgg aagagaacgg cgaccgccgg ctgcggatgt tttccacctg
     3841 ggagatcacc aaatacctga tccccgtcgc gccgcagcat ttccgccgcg tgctgcgcgc
     3901 ccgccccgac ctgccgcagg gccggtccga gaccggggcc ggcgccaagt ggttcaccct
     3961 ggacgaggtg cagcgcctgc gcgcgcattt cggcgccgag gggtcgaagt cgaaggaata
     4021 cctgccctat cgcccgaagg acctgcccgc caagatcgtc gcggtggcga atttcaaggg
     4081 cggggtcggc aagacc
//
LOCUS       DTVW01000291            2151 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1367614, whole
            genome shotgun sequence.
ACCESSION   DTVW01000291 DTVW01000000
VERSION     DTVW01000291.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2151)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2151)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2151
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1367614"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..137)
                     /locus_tag="EYO87_03880"
     CDS             complement(<1..137)
                     /locus_tag="EYO87_03880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_351625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroline-5-carboxylate reductase"
                     /protein_id="HIC65132.1"
                     /translation="MTTQNKFFDDISKMMTNAMGVAQGAKSEAETAMKGWVDRWLADR
                     D"
     gene            269..1147
                     /locus_tag="EYO87_03885"
     CDS             269..1147
                     /locus_tag="EYO87_03885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010392857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HIC65133.1"
                     /translation="MIPFPDISPEIFTIDLGGLSLSLRWYALAYLAGLLLGWRLLIRM
                     MRNDAVWGDRAPMRPEAVDDLLTWVILGVILGGRLGFVLFYQPGYYLSNPAEILKVWE
                     GGMSFHGGFAGVILATWIFCRRHDIPPLRVADAMSVVAPIGLFFGRIANFINAELWGR
                     PTDMPWGVIFPGEAAQSCPGVEGICARHPSQLYEAGLEGLLLGLILWAVLRAGGLRRP
                     GLLFGVFLVGYSLARFFVEFFRVADPQFITPDNPLGHVIGGPVIGLSMGQLLSLPMLL
                     VGLFFVLWARRRPAIA"
     gene            1144..>2151
                     /locus_tag="EYO87_03890"
     CDS             1144..>2151
                     /locus_tag="EYO87_03890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HIC65134.1"
                     /translation="MTPLARVIAQRIRVAGPMTLADYMELCLMHPRHGYYASRDPFGA
                     AGDFTTAPEISQIFGELCGLALAQAWMDQGRPAPFTLAEPGPGRGTLMADMLRAIRAV
                     PGMSDAAEVALIEASPFLRQVQKDRLGAIRHLDHVEELPDKPLFLIANEFFDALPIRQ
                     FQRLDDGWAERVVSGDENGLRMGLAPPVLLPREGQVGEVIEDRPAATAIVTAIASRVA
                     SHGGAAILVDYGGWNGVGDTFQALRAHRPEDPLAHPGEADLTAHVDFAPLAAASIQAG
                     AVASRPIHQGDWLLSLGAADRARRLAAAGDRGAMVALDRLTAADKMGHLFKAMAIWPR
                     GA"
BASE COUNT          284 a          711 c          727 g          429 t
ORIGIN      
        1 aagtcgcgat ccgccagcca gcgatcgacc cagcccttca tcgcggtctc ggcctcggat
       61 ttcgcaccct gggccacgcc catcgcgttg gtcatcatct tggagatatc gtcgaagaac
      121 ttgttctgcg tggtcatgaa tcgctcctgc ctttgcgacc ttatatgggc gtggcggcgc
      181 gggcttcaac gccgcggggt gcggcgaagc gccggttgac accgcatcct gcgccgctag
      241 cgtgcgcccc gcattccgcg aggcccccat gattcccttt cccgacattt cgcccgagat
      301 cttcaccatc gatctgggcg gcctttcgct gtcgctgcgc tggtatgcgc tggcctatct
      361 ggcggggctg ctgctgggct ggcggctgct gatacgcatg atgcgcaacg acgcggtctg
      421 gggcgaccgg gcgccgatgc gtccggaggc ggtcgacgat ctgctgacct gggtcatcct
      481 gggcgtgatc ctgggcggcc gcctgggctt cgtgctgttc tatcagccgg gctattatct
      541 ttcgaacccc gccgagatcc tcaaggtctg ggagggcggg atgagctttc acggaggctt
      601 cgcgggcgtc atcctggcca cgtggatctt ctgcaggcgc cacgacatcc cgcctctgcg
      661 cgtggccgac gcgatgtcgg tcgtggcccc gatcgggctg ttcttcggcc gcatcgcgaa
      721 tttcatcaac gccgaactct ggggccggcc gaccgacatg ccgtggggcg tgatctttcc
      781 cggcgaggcc gcgcaatcct gtccgggcgt cgaagggatc tgcgcccgcc atcccagcca
      841 gctctacgag gccgggctgg agggcttgct gctgggtctg atcctctggg ccgtgctgcg
      901 cgccggcggc ctgcggcggc ccggcctgtt gttcggggtg ttccttgtcg gatacagcct
      961 ggcccgcttc ttcgtggaat ttttccgggt cgccgatccg caattcatca cgcccgacaa
     1021 tccgctgggc catgtgatcg gcgggccggt gatcggactg agcatgggtc agcttctgtc
     1081 gctgccaatg ctgctggtgg gtctgttctt cgtcctctgg gccagacgtc gccccgccat
     1141 cgcatgacgc cgctggcgcg cgtgatcgca cagcgtatcc gcgtcgccgg gccgatgacg
     1201 ctggccgatt acatggaatt gtgcctgatg catccgcgtc atggctatta tgccagccgc
     1261 gatcccttcg gggccgcggg cgatttcacc accgccccgg aaatctctca gatcttcggc
     1321 gagttatgcg ggctcgccct ggcgcaggcc tggatggatc agggccgccc cgcgcccttt
     1381 accctggccg agccggggcc gggacgcggg acgctgatgg cggacatgct gcgtgcgatc
     1441 cgggccgtgc ccggcatgtc ggacgcggcc gaggtggcgc tgatcgaggc atcgcccttt
     1501 ctacgccagg tccagaaaga ccggctgggc gcgatccggc atctcgatca cgtcgaggaa
     1561 ctgccggaca agccattgtt cctgattgca aacgaatttt tcgatgcctt gccgatccgg
     1621 cagtttcagc gcctggatga cggctgggcc gaacgtgtcg tcagcggcga tgaaaacggc
     1681 ctgcgcatgg gtcttgcgcc gccggtcctt ctgccgcgtg aaggacaggt cggcgaggtg
     1741 atcgaggatc ggcccgccgc gaccgccatc gtcactgcca tcgcctcgcg cgttgccagc
     1801 catggcggcg cggcgatcct tgtcgattac ggcggctgga acggtgttgg cgatacgttt
     1861 caggccctgc gcgcgcatcg ccccgaggat ccgctggccc atcccggcga ggccgatctg
     1921 accgcccatg tcgatttcgc accgctggcg gcggcctcca tccaggcggg cgcggtggca
     1981 tcgcgcccga tccatcaggg tgactggctg ctgtctctgg gcgccgcaga tcgggcgcgc
     2041 aggctggccg cggccgggga tcggggtgcg atggtcgcac ttgatcgctt gaccgccgca
     2101 gacaaaatgg gtcacttgtt caaggcgatg gccatctggc cccgcggggc g
//
LOCUS       DTVW01000292            4591 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1369079, whole
            genome shotgun sequence.
ACCESSION   DTVW01000292 DTVW01000000
VERSION     DTVW01000292.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 4591)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4591)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4591
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1369079"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..860)
                     /gene="rsmI"
                     /locus_tag="EYO87_03895"
     CDS             complement(<1..860)
                     /gene="rsmI"
                     /locus_tag="EYO87_03895"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018001276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HIC65135.1"
                     /translation="MATGSGGDGVKGREIEPARPLAARIEASALQAGLYLVATPIGTA
                     RDITLRALDVLNSADLLAAEDTRVMRHLMAIHGIPLRGRRVLSYHDHNAEKARPALMA
                     ALARGQSVAYASDAGTPLVADPGYRLAREAAEAGARVHAIPGPSAPLVALSLSGLPSD
                     RFLFAGFPPHAKAARAAWLRQWAGVDATLILFESPRRVKQTLAELCEIDANRVTVVAR
                     ELTKKFEEVIRGRAEDLAVDPRLDGLKGEVVMLLDRPTMREAGEDDLRAALLQRLSRM
                     SVKDAAREVA"
     gene            970..2184
                     /locus_tag="EYO87_03900"
     CDS             970..2184
                     /locus_tag="EYO87_03900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007816329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein activator"
                     /protein_id="HIC65136.1"
                     /translation="MFASATTRPATGLRRLFTAGAAMLSALVLAACEPTGGRDNDVAT
                     GPAIGPLIEPGQPVRVALLTPAGSGSDNLEWLSRSLKNAARMAASDAQGAAIDLRVYD
                     TGGSTERAVQQANAAADAGAQIIVGPLFAEAANAVGNAMRDRNINVLSFSNNAEIAGG
                     NVFILGNSFANVADRLVGYGVRQGKRNIYVVAEDDVAGQLGGRAIETAIARNGARLAG
                     RTNHPVSVSGIDAVIPQIAAAAQSGRVEAVFMTANNQAVLPYLTEKLAASGIRSPVTQ
                     MMGLTRWDQPPSRVGLPQLQNGWFAIPDQGLKTQFDARYRAAYGEAPHELAGLGYDGV
                     AAIASLVRTGRRNALTTTGLTQRSGFSGVGGVFRLRGNGTSQRALAVATLRGNQVVIL
                     DPAPRGFGGYGF"
     gene            2187..>4591
                     /locus_tag="EYO87_03905"
     CDS             2187..>4591
                     /locus_tag="EYO87_03905"
                     /EC_number="2.7.7.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018001278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="[protein-PII] uridylyltransferase"
                     /protein_id="HIC65137.1"
                     /translation="MAAAATGPIVQSAPALPGAHAVFDPDAFLPDLHRALDGIGEPRR
                     IRAVTVDLLAGARAAAMADIEAGFASHPRAARETVRAIASLTDGIVTIVHHIATGYLH
                     PVRNASEGERLAVLAVGGYGRAEMAPFSDVDLLFLTPYKITAWAESVVESMLYMLWDL
                     KLKIGHSIRSVDDCLRLGAADMTIRTSLVEHRLVTGHAPLAEELRQRLWSDLFAKSVP
                     EFVEAKLEERAQRHQRQGGQRYVLEPNVKEGKGGLRDLQTLYWIAKYIHRVDRAVELV
                     DLGVFTREEHLSFWQAEDFLWAARCHLHLIAGRPVDMLSFDMQVEVARRMGYHDTQAR
                     RGVEYFMQDYFRHATRVGELTRVFLTELESRHVRSAPILGRIFRRRRKLKAGFVDQLG
                     RLAIQDEAGFLADPLNILRLFEEALRTGILIHPDAMRLIAANLDRIDDRMRQDPEAIR
                     LFMELLIRHGNPERALRRMNELGVLAAFIPEFEPVVAMMQFNHYHHYTVDEHSIQCVA
                     ALAEIERGEHPEDLPLSHAIMDSGINRRVLYLATLLHDIGKGRPEDHSILGARLARRV
                     ASRFGFSQDDIDNVEWLVRNHLLMSDVAQKRDISDPRTLRDFAKAVKTRRRLDMLLVL
                     TVCDIRGVGPGVWNNWKAVLLRKLHTETATALDNGLEELNRDKRQNEAKRSLRHLLIA
                     KGWEARAIRAEIARHYDNYWPGLPSETQAVFAELLSGIDADEIRTDLRADHDRDATRA
                     AFVLADHPGIFSRLCGALTLMGANVVDARTYTTRDGYATAVFWVQDADGHPFAEDRLP
                     RLR"
BASE COUNT          753 a         1623 c         1452 g          763 t
ORIGIN      
        1 tcggccacct cgcgcgcggc atccttcaca ctcattcggc tcagcctctg caacagggcc
       61 gcgcgcagat cgtcttcgcc ggcctcgcgc attgttggcc tgtccagcag catgaccacc
      121 tctcccttca gcccgtccag ccgcggatcg accgccagat cctccgcccg gccccggatc
      181 acctcttcga acttcttggt cagttccctt gccaccactg taacccgatt cgcgtcaatc
      241 tcgcacaatt ctgccaatgt ttgcttaacg cgcctggggc tttcgaacag gatcagtgtg
      301 gcatccacgc cggcccattg ccgcagccag gcggcgcgcg cggccttggc atggggcgga
      361 aagcccgcga acaggaaccg gtcgctgggc aggcccgaca ggctcagcgc aaccagcggc
      421 gccgaggggc cggggatcgc atggacccgc gcgcctgctt cggcggcctc gcgcgccaga
      481 cggtagcccg gatccgccac cagcggcgtg cccgcatccg aggcataggc gacgctttgg
      541 ccccgggcca gtgccgccat cagcgcgggg cgggcctttt cggcattgtg gtcgtgatag
      601 gacagcaccc ggcggccgcg cagcggaatg ccgtgaatcg ccatcagatg ccgcattacc
      661 cgcgtgtcct cggcggccag cagatcggcc gaattcaaca cgtccagcgc gcgcaaggtg
      721 atgtcgcgcg ccgtcccgat gggggtggcg accagataca gacccgcctg cagcgccgat
      781 gcctcgatcc gcgcggccag tgggcgcgcg ggctcgatct cgcggccttt cacgccgtct
      841 ccgcctgacc cggtggccat gacatttccc cctctgctga cgcggtcggg ctgattgcca
      901 agcgatccgg ttggacctag gctgcccgca actcgtcgcg acgacaaaca caaagcaggg
      961 aggttccaca tgtttgcatc cgccacaacc cggcccgcca ccggactgcg ccgcctgttc
     1021 acagccggag ccgcgatgct gtcggccctt gtccttgccg cctgcgagcc gaccggaggc
     1081 cgtgacaacg atgtcgcgac cggccccgcc atcgggccgc tgatcgaacc gggacagccc
     1141 gtgcgcgtcg cccttctgac acctgccggc agcggatcgg acaatctgga atggctgtcg
     1201 cgaagcctga agaacgcggc gcgcatggcc gcatcggacg cgcagggtgc ggccatcgac
     1261 ctgcgcgtct atgacaccgg gggcagcacc gaacgggccg tccagcaggc caatgccgcc
     1321 gccgatgccg gcgcccagat catcgtcggc ccgctgttcg ccgaggccgc caacgccgtc
     1381 ggcaacgcca tgcgcgatcg caacatcaac gtgctgtcct tctcgaacaa tgcggaaatc
     1441 gccggcggca acgtcttcat tctgggcaac agtttcgcca atgtggccga ccggctggtc
     1501 ggctatggcg tccgccaggg caagcgcaac atctatgtcg tcgccgaaga tgacgtcgcg
     1561 ggccagcttg gcggccgcgc catcgagacc gccatcgccc gcaacggtgc gcgcctcgcg
     1621 gggcgcacca accaccccgt ctcggtcagc ggcatcgacg cggtgatccc gcagatcgcc
     1681 gccgcggcgc agtcggggcg ggtggaggcg gtcttcatga ccgccaacaa tcaggccgtg
     1741 ctgccctatc tgacggaaaa actggccgcc tcgggcatcc gttcgccggt cacgcaaatg
     1801 atgggcctga cccgctggga ccagccgccg tcgcgcgtcg gcctgccgca gcttcagaac
     1861 ggctggttcg cgatccccga tcagggcctg aagacgcaat tcgacgcacg ttatcgtgcc
     1921 gcctatggcg aggcgccgca cgaactggcc ggtcttggct atgacggcgt ggccgccatt
     1981 gcctcgctgg tccgcacggg caggcgcaat gcgctgacca cgaccggact gacacagcgt
     2041 tcgggatttt ccggcgtcgg cggcgtcttc cgcctgcgcg gcaacggcac ctcgcaacgc
     2101 gcgcttgccg tggcgacgct gcgcggcaat caggtggtga tcctcgatcc cgcaccgcgc
     2161 ggcttcggcg gatacgggtt ctgatcttgg ccgccgccgc gaccggcccg atcgtgcaaa
     2221 gcgcccccgc cctgcccggg gcgcacgcgg tcttcgaccc cgacgccttt ctgcccgacc
     2281 tgcaccgggc gctggacggg atcggcgagc cgcgccggat ccgggcggtc acggtcgatc
     2341 ttctcgccgg tgcccgcgcc gccgccatgg ctgatatcga ggccggattc gccagccatc
     2401 cccgcgccgc ccgcgaaacc gtgcgcgcca tcgccagcct gacggatggc atcgtcacca
     2461 tcgtgcacca catcgcaacc ggctatctgc acccggtccg caacgcatcg gagggcgagc
     2521 gtctggccgt tctggccgtc ggcggctacg ggcgggccga gatggcgccg ttctcggatg
     2581 tcgatctgct gttcctgacg ccctacaaga tcaccgcctg ggccgaaagc gtggtcgaat
     2641 ccatgcttta catgttgtgg gatctgaagc tgaagatcgg gcattcgatc cgcagcgtgg
     2701 acgattgcct gcgcctcggc gccgccgaca tgacgatccg cacctccctg gtcgaacatc
     2761 gtctcgtcac cggccacgcg ccgctggccg aggaattgcg tcagcggctg tggtcggatc
     2821 tgttcgcgaa atcggttccc gaattcgtcg aggccaagct ggaggaacgc gcccaacgcc
     2881 atcagcggca gggtgggcag cgctatgtcc tggaacccaa tgtcaaggag ggcaagggcg
     2941 gcctgcgcga tctgcaaacg ctttactgga tcgcgaaata catccaccgc gtcgatcgcg
     3001 ccgtggaact ggtcgatctg ggtgtcttca cccgcgaaga gcacctgtcc ttctggcagg
     3061 ccgaggattt tctctgggcc gcgcgctgcc atctgcatct gatcgcggga cgccccgttg
     3121 acatgctgtc cttcgacatg caggtcgagg tggcgcgacg catgggatat cacgacaccc
     3181 aggcccggcg cggagtcgaa tatttcatgc aggattactt ccgccacgcc acccgcgtcg
     3241 gcgaactgac ccgcgtcttc ctgaccgaac ttgaatcccg ccatgtgcgc agcgcgccga
     3301 tcctgggccg catcttccgc cgccggcgca agctgaaggc gggcttcgtc gatcagcttg
     3361 gccgtctggc catccaggac gaggcgggct ttctcgccga tccgctcaac atcctgcgtc
     3421 tcttcgaaga ggcgttgcgc accggcatcc tgatccaccc cgatgcgatg cgcctgatcg
     3481 ccgccaacct ggaccggatc gacgacagga tgcgccagga tcccgaggcg atccgactgt
     3541 tcatggaatt gctgatccgc cacggcaatc ccgaacgcgc gctgcgccgc atgaacgaac
     3601 tgggcgtgct ggcagccttc attccggaat tcgagccggt ggtggcgatg atgcagttca
     3661 accactatca tcactacacc gttgacgaac attcgatcca atgcgtcgcc gccctggccg
     3721 agatcgagcg cggcgaacat cccgaagacc tgccgctgtc ccacgcgatc atggattcgg
     3781 gcatcaaccg ccgcgtcctg tatctggcga cgctgctgca cgacatcggc aagggccgcc
     3841 ccgaggatca ctcgatcctg ggcgcccgcc tcgcccgccg cgtggccagc cgcttcggct
     3901 tttcccagga cgatatcgac aatgtcgaat ggctggtgcg caatcacctg ctgatgtcgg
     3961 acgtggcgca gaaacgcgat atttccgacc cccgcacgtt gcgcgatttt gccaaggcgg
     4021 tgaagacacg ccggcggctg gacatgttgc tggtgctgac cgtctgcgac attcgcggcg
     4081 tcgggccggg cgtctggaac aactggaagg cggtattgct gcgcaagctg cataccgaaa
     4141 ccgccacggc gctggataac ggcctggaag aactgaaccg tgacaagcgc cagaacgagg
     4201 ccaagcgatc cctgcgccac ctgctgatcg ccaagggctg ggaggcccgc gcgatccggg
     4261 ccgagatcgc gcgccactac gacaattact ggcccggcct gccctccgag acgcaggcgg
     4321 tctttgcgga attgctgagc ggcatagacg cggacgagat caggaccgac ctgcgcgccg
     4381 atcatgaccg cgacgccacc cgcgcggcct ttgttctggc cgatcatcca ggcatcttct
     4441 cgcggctctg cggggcgctg acgctgatgg gcgccaatgt cgtggacgcg cgcacctata
     4501 ccacgcgcga cggctacgcg accgcggtgt tctgggtgca ggatgccgat ggccatccct
     4561 ttgccgagga tcgcctgccg cgcctgcgcc a
//
LOCUS       DTVW01000293            3388 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1373102, whole
            genome shotgun sequence.
ACCESSION   DTVW01000293 DTVW01000000
VERSION     DTVW01000293.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3388)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3388)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3388
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1373102"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..803
                     /locus_tag="EYO87_03910"
     CDS             <1..803
                     /locus_tag="EYO87_03910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009571852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF2156 domain-containing protein"
                     /protein_id="HIC65138.1"
                     /translation="ALVWSFLEYAAQSNGRPVFYEISGRNLALWVEMGLTLHKTGEEA
                     IIRLSDFSLSGGRFKTMRAAMNKRQRDGYECALLSAPHDPALMAELRQISEAWLGGKA
                     GHEKGFSVGRFDPDYLALFDIAVVRKDGRIAAFANIMESCGGRRVSVDLMRYLPGEAS
                     GLMEYMFLCLIQHYKARGAEEFSLGTAPLSGLSERSVARSWNRFGGLIYRHARAFYNF
                     EGLRAFKQKFQPEWRPRYLALPPNVSPMLAMGDVALLIAGSARGLISR"
     gene            808..2880
                     /locus_tag="EYO87_03915"
     CDS             808..2880
                     /locus_tag="EYO87_03915"
                     /inference="COORDINATES: protein
                     motif:HMM:PF09335.9,HMM:PF14067.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HIC65139.1"
                     /translation="MNLSLDQILPSLQALGVLGYWLIGLASMLEAFFLTGVVVPGTLI
                     VDAGGVLVQRGLLDFFDLVWFVAIGSVLGSELGYWIGRLAMNRLPGRRRIGDSAAFAR
                     ATRLFERRGGMALIIGRFLGPVAGLVPLAAGMAGMKRRQFLIWNLAGSLPYALSHVAI
                     GYFLGDVMGRIGGSLTRLAVLGGGVGLLLIVLWVMLYAALRLVPLAWAVISAALGNLA
                     DSPAIGRRIAAHPQAARWVLARFDGTSFTGLPLSLLMVIFFYIGAVWLDSAVDFLAGN
                     PMLQLDMRLAQLIHHFQSPGPIRIASLITALGGWHVVVPVFGAAMLWLLLSGRRALAA
                     GLAVSVIGNTISVALLKLAFARPRSPLGVFAETSGSFPSGHAAASVAAYGMILYVIWR
                     AGRLRAETALLLAGFLAFAIGGSRIYLIEHYLSDVLNGWLVGALWVTMGVAIAEWRLS
                     ERPEPHRGARGSARIVGVALMLGLIGLAAANVWRYDHPRNTPTQTADRILPDAGGLAG
                     IAGLPASTESLMGSPVHPISLIVLARDEAALSEAMRAAGWDASRLPSAGLVFDALYAA
                     LAGEEDPTIETVSHFWRGQPNDLAFVQRRPDGATRSIAAPKARFWRSEYVTAQGFRAF
                     FGTVGQDEAAEPGSGRPFASDPAIRDRLEQQLLALQATRVTRIALPRPRDAAATAEQA
                     DAVVLALP"
     gene            3014..>3388
                     /locus_tag="EYO87_03920"
     CDS             3014..>3388
                     /locus_tag="EYO87_03920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65140.1"
                     /translation="MNATFRNLLLSAVLIAVPAGGFTLAEMYISPTAQDASATQASAG
                     LGDLSAYKTIVTDTQAIAATGDYTAAERRITDLETLWDKNAAALRQGDRGAWNNVDAA
                     ADGAFKALRADAPDKATVDVALA"
BASE COUNT          484 a         1107 c         1122 g          675 t
ORIGIN      
        1 aggcgctcgt ctggtccttt ctcgaatacg ccgcccagtc aaacgggcgg cccgtcttct
       61 acgagatcag cggacgcaac ctcgcgctgt gggtcgaaat ggggctgacg ctgcacaaga
      121 cgggcgagga agcgatcatc cgcctgtccg atttcagcct ctcgggcggc cggttcaaga
      181 ccatgcgcgc cgcgatgaac aagcgccagc gggacggtta tgaatgcgcg cttctgtccg
      241 cgccgcacga ccccgcgctg atggccgaac tgcgccagat ctcggaggcc tggcttggcg
      301 gcaaggccgg tcacgagaag ggcttttcgg tcggccggtt cgacccggac tatctggcgc
      361 tgttcgacat cgccgtggtg cgcaaggatg gccgcatcgc agcctttgcg aatatcatgg
      421 aatcctgtgg cgggcggcgg gtcagcgtcg atctgatgcg atacctgccc ggagaggctt
      481 cgggcctgat ggaatacatg ttcctctgcc tgatccagca ctacaaggcg cgcggcgccg
      541 aagaattcag ccttggcaca gcgccgttgt cgggcctgtc cgaacgttcg gtcgcgcgat
      601 cctggaatcg ctttggcggg ctgatctatc gtcatgcgcg cgccttctac aacttcgagg
      661 gcctgcgcgc cttcaagcag aaatttcagc ccgaatggcg cccgcgctat ctggcgctgc
      721 cacccaatgt gtcacccatg cttgcaatgg gcgatgtcgc gctgctgatt gcgggttcgg
      781 cgcgcggact gatttcaaga taggccgatg aacctttcac ttgatcaaat tcttccctcg
      841 ctccaggcgc ttggcgttct tggctactgg ctcatcggtc ttgcatcgat gctcgaggcg
      901 ttcttcctga ccggggtcgt ggttcccgga accctgatcg tggatgccgg cggcgttctg
      961 gtgcagcggg gtcttctgga tttcttcgat ctggtctggt tcgtcgcgat cggctctgtc
     1021 ctcggttcgg aactgggcta ctggatcggc aggctggcca tgaaccggct gcccggccgg
     1081 cgtcggatcg gcgattcggc cgcctttgca cgggctaccc gcctgtttga aagacgcggc
     1141 ggaatggcgc tgatcatcgg ccgctttctg gggccggtcg caggtctcgt accgctggcc
     1201 gccggcatgg cgggaatgaa gcgacgccag tttctgatct ggaacctggc gggcagcctt
     1261 ccctatgcgc tgagccatgt cgccataggc tattttctgg gcgacgtcat gggcaggatc
     1321 ggcggatcgc tgacgcgcct cgccgtcctg ggcggcggtg tcggcctgtt gctgatcgtg
     1381 ctttgggtca tgctttatgc ggcgctgcgg ctggttcccc tggcatgggc ggtcatttct
     1441 gccgccctcg gcaatctggc cgacagcccc gcgatcggga gacgcatcgc agcccacccg
     1501 caagcggcgc gttgggttct ggcccgtttc gacggcacct ccttcaccgg attgccgctg
     1561 agtcttctga tggtgatctt cttttatatc ggcgcggtct ggctggattc cgccgtcgat
     1621 ttcctggctg gcaacccgat gcttcaactc gacatgcggc tggcccagct gatccaccac
     1681 ttccagtcgc cggggccgat ccggatcgcc tcgctgatca ctgcattggg gggatggcat
     1741 gtcgtggtgc cggtcttcgg cgcggcgatg ctgtggctgc tgctgtccgg tcggcgcgcg
     1801 cttgccgcgg ggctggccgt atcggtgatc gggaacacga tctcggtggc cttgctgaag
     1861 cttgccttcg cgcgaccgcg ttccccgctg ggcgtcttcg ccgaaacctc gggcagcttt
     1921 ccgtcgggtc atgcggccgc gtcggtcgcg gcctacggga tgattctcta tgtcatctgg
     1981 cgggccggaa ggctgcgcgc cgagacggcg cttctgctgg cgggttttct ggccttcgcc
     2041 atcggcggaa gccggatcta tctgatcgag cattacctca gcgatgtcct gaacggctgg
     2101 ctggtcggcg cgctgtgggt caccatgggc gtggccatcg ccgaatggcg gctgtcggaa
     2161 cggcccgagc cgcaccgggg cgcccgcgga tccgcgagga tcgtgggcgt tgcgctgatg
     2221 ctgggactga tcggcctggc cgccgcgaat gtctggcgct atgaccatcc gcgcaatacc
     2281 ccgacccaga cggccgatcg gatcctgccg gatgccgggg gcctggccgg gatcgcgggg
     2341 cttcccgcct cgacggaatc gctgatggga tcgccggttc atcccatctc gctgatcgtc
     2401 cttgcgcggg acgaagccgc cctgtccgag gccatgcggg cagcgggttg ggacgcatcc
     2461 cggttgccct cggccggcct tgtcttcgac gccctctatg ccgccctcgc cggcgaggaa
     2521 gacccgacca tcgagaccgt gtcgcatttc tggcgcggcc agccgaacga tctggctttc
     2581 gtccagcggc ggccggatgg tgcaacacgg tcgatcgccg ctccgaaggc acggttctgg
     2641 cgcagcgaat atgtcaccgc ccagggattt cgcgcctttt tcgggaccgt cgggcaggac
     2701 gaggccgcgg agccaggatc cgggcggccc ttcgcgtccg accccgccat tcgcgaccgg
     2761 ctggaacaac agcttcttgc cctgcaggcg acccgtgtga cccgcatcgc gctgccacgg
     2821 ccgcgcgatg ccgccgcgac ggcagaacag gctgacgcgg tcgttttggc cctgccctga
     2881 ccggccacgc accaaggcgg cgcgggctta ccaaaccgta agaaccgcgt cagaccttgc
     2941 gggaaagatt ctgtcatctc ttgcgctgcg gacctcggat cgaggccgcc ttgaacaaga
     3001 caggatgctt ttcatgaacg ccacctttcg aaacctgctc ttgtcggcgg tgctgatcgc
     3061 cgttccggcc ggcgggttca ccctggccga gatgtatatc tcgccgacag cgcaggacgc
     3121 ttctgccacg caggcctcgg ccggtcttgg cgatctgtcc gcctacaaga ccatcgtgac
     3181 cgacacgcag gccatcgccg ccaccggcga ttacaccgcg gccgagcgcc ggatcaccga
     3241 tctcgaaacc ctgtgggaca agaacgccgc cgccctccgc cagggcgatc gtggcgcttg
     3301 gaacaacgtc gacgcggccg cggacggcgc cttcaaggcg ctgcgcgccg atgcgccgga
     3361 caaggcgacg gtcgatgtgg cgctggcc
//
LOCUS       DTVW01000294            2409 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1373417, whole
            genome shotgun sequence.
ACCESSION   DTVW01000294 DTVW01000000
VERSION     DTVW01000294.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2409)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2409)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2409
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1373417"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..791
                     /locus_tag="EYO87_03925"
     CDS             <1..791
                     /locus_tag="EYO87_03925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007791710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HIC65141.1"
                     /translation="SIPRLFSAGLVPGLLMALAFIAVTAAICWVRPGLGGPSRGFSWA
                     ERARSLTQLVPIVVLFVVVIGSIYAGWATPTESAAIGVAIAALIAILLGDGLGPRALS
                     EALHGTIRISAMIMLVVTGATFLNFAMTSAGLGRQLTDLIGGSGLSPFGTLLLVIALY
                     LVLGFFIETLSLMVATIPIVVPIIAGLGYDKVWFGVLLIVLIEMALITPPVGLNLFVV
                     QGARKSGPMSDVIMGVIPYVLVMLTMIAALVALPGLALWLPSVL"
     gene            805..1470
                     /locus_tag="EYO87_03930"
     CDS             805..1470
                     /locus_tag="EYO87_03930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009814631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2848 domain-containing protein"
                     /protein_id="HIC65142.1"
                     /translation="MRFSAGGEALDLDLKHLVVAGWTGRDPSAIRHHIEELAAIGVSP
                     PSATPLYYRVSAALLTQAGRIQVVGYGSSGEVEPLLLQSGGRRWLGLASDHTDRALEA
                     HSVALSKQVCAKPCAAEVWPWEDVADRLEAIVLESWIDDSGEWVLYQQGTLASIRPLT
                     ELAAGAGLDDLAAEGVAMLCGTFGARGGVRPAARFRMMMRDPATGREIRHDYAVQTLP
                     EIA"
     gene            1529..2266
                     /locus_tag="EYO87_03935"
     CDS             1529..2266
                     /locus_tag="EYO87_03935"
                     /inference="COORDINATES: protein motif:HMM:PF02682.14"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxyltransferase domain-containing protein"
                     /protein_id="HIC65143.1"
                     /translation="MSDARSPEVLPAGPDGVLVRFGLTPDPDAMAAAQVLAAELQDDA
                     PAAAVEIAPALVSVLVRFDPGRSDRGAVARDLAARAERIAAARPVLPDPPRRWTIPAA
                     FGGDHGPQLAEVAEKLGMSEDRAVQQICESDLRVLAIGFAPGQPYIGLLPRAWNLPRL
                     AEMTPNVPVGAVVVAVRQIVIFGAASTTGWRQVARTGFRTFVPDRETPMLLKAGDAIR
                     YAPIGAAEIEGLMTPDGMGGARLEILL"
     gene            2263..>2409
                     /locus_tag="EYO87_03940"
     CDS             2263..>2409
                     /locus_tag="EYO87_03940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007791699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urea amidolyase"
                     /protein_id="HIC65144.1"
                     /translation="MSRLTISRADGLLSVQDMGRPGHLGQGLSCGGAMDRMALIEAAA
                     LLGAD"
BASE COUNT          303 a          753 c          912 g          441 t
ORIGIN      
        1 cctcgatccc gcgcctgttt tcggccgggc tggtccccgg cctgctgatg gccctggcct
       61 tcatcgcggt cacggcggcg atctgctggg tgcggccggg gctgggcggg ccttcgcgcg
      121 gcttttcctg ggccgaacgg gcgcggtcgc tgacccagct tgtgccgatc gtggtgctgt
      181 tcgtggtcgt gatcgggtcg atctatgcgg gttgggcgac gcccacggaa agcgcggcca
      241 tcggcgtggc catcgcggcg ctgatcgcga tcctgctggg tgacggtctg ggtccacgcg
      301 ccctgtccga ggcgctgcac ggcaccatcc gcatctcggc gatgatcatg ctggtggtga
      361 cgggggcgac gtttctgaac tttgccatga catcggccgg gctggggcgg caactgaccg
      421 atctgatcgg gggatcgggg ctgtcgccct ttggcacgct gctgctggtc atcgcgctgt
      481 atctggtgct gggctttttc atcgagacct tgtcgctgat ggtcgcgacc atccccatcg
      541 tggtgccgat cattgccggg ctgggctatg acaaggtgtg gttcggggtg ctgttgatcg
      601 tgctgatcga gatggcgctg atcacgccgc cggtgggcct gaacctgttc gtggttcagg
      661 gggcgcggaa atccggcccc atgagcgacg tgatcatggg cgtgattccc tatgttctgg
      721 taatgctgac gatgatcgcg gcactggtcg cgttgccggg gctggccttg tggttgccct
      781 cggtgctgtg aaaggaaatg gaagatgcga ttttcggccg ggggcgaggc cctcgatctg
      841 gacctgaaac acctggtcgt ggcgggctgg accggccgcg acccctccgc gatccggcac
      901 catatcgagg aactggccgc gatcggggtc agcccgcctt ctgcgacacc gctgtattac
      961 cgggtctcgg cggcgctgct gacgcaggca ggccggatcc aggtggtggg ctatggctca
     1021 tccggcgagg tcgagccgct gctgctgcaa tcgggcgggc gacgctggct tggccttgcc
     1081 tcggaccata ccgaccgggc gcttgaggcg cattcggtcg ccttgtcgaa acaggtctgc
     1141 gccaagccct gcgcggccga ggtctggccg tgggaggatg tcgccgaccg gctggaggcg
     1201 atcgttctgg aaagctggat cgacgacagc ggggaatggg tgctgtatca gcagggcacg
     1261 ctggcctcga tccggccgtt gacggaactg gccgcggggg ccggtctgga cgatctggcc
     1321 gccgagggtg tggcgatgct gtgcgggacg ttcggcgcca ggggtggcgt gcgcccggcg
     1381 gcacggtttc gcatgatgat gcgcgatcct gcgacaggac gcgagatccg ccacgattat
     1441 gctgttcaga ccctgcccga gatcgcatga cggccgccct tccagatgac cgcgagggca
     1501 cccgcccgat ggcaaggatc gcgccgcgat gagcgacgcg cgctcgcccg aggtgctgcc
     1561 cgcggggccg gacggggttc tggtccgctt cggcctgacg cccgatcccg acgcgatggc
     1621 ggcggcgcag gttctggctg cggaattgca agacgacgca ccggccgccg cggtcgagat
     1681 cgccccggcg ctggtttcgg tcctggtgcg gttcgatccg ggccgctcgg atcggggcgc
     1741 ggtggcgcgc gatctggcgg cgcgggccga acggatcgcg gccgcgcgtc cggtgctgcc
     1801 cgatccgccc cggcgctgga ccatcccggc ggctttcggc ggcgatcacg gcccgcaact
     1861 ggccgaggtg gccgaaaagc tgggcatgtc cgaagatcgt gcggtgcagc agatctgcga
     1921 gtcagatctg cgggttctgg ccatcggctt cgcccccggc cagccctata tcgggctgtt
     1981 gccccgtgcc tggaacctgc cgcggctggc cgagatgacg ccgaacgtgc cggtcggcgc
     2041 cgtcgtcgtc gccgtgcgcc agatcgtgat cttcggcgcg gcctcgacca cgggctggcg
     2101 tcaggtggcg cggaccgggt tccgcacctt cgttccggat cgcgagacgc cgatgctgct
     2161 gaaggcggga gatgcgatcc gctatgcccc gatcggcgcg gccgagatcg aggggctgat
     2221 gacgcccgat ggcatgggcg gcgcgcggct ggagatcctg ctatgagccg gttgaccatc
     2281 agccgcgccg acgggctgct gtcggtgcag gacatggggc ggcccggcca tctggggcag
     2341 ggcctgtcat gcggcggtgc gatggaccgg atggccctga tcgaggccgc cgcgcttctg
     2401 ggcgcggac
//
LOCUS       DTVW01000295            1317 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1373823, whole
            genome shotgun sequence.
ACCESSION   DTVW01000295 DTVW01000000
VERSION     DTVW01000295.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1317)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1317)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1317
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1373823"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..380)
                     /locus_tag="EYO87_03945"
     CDS             complement(<1..380)
                     /locus_tag="EYO87_03945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013912958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase"
                     /protein_id="HIC65145.1"
                     /translation="MHSPAGAVRTTCPYCGVGCGVLATPTPEGGLTVAGDPDHPANFG
                     RLCVKGAALAETVGLRGRLLAPQIDGRPAGWDAALDLVARRFARTVARHGPDSVAFYV
                     SGQLLTEDYYVANKLMKGFIGSAN"
     gene            complement(550..885)
                     /gene="nirD"
                     /locus_tag="EYO87_03950"
     CDS             complement(550..885)
                     /gene="nirD"
                     /locus_tag="EYO87_03950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010394469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrite reductase small subunit NirD"
                     /protein_id="HIC65146.1"
                     /translation="MTRYVDIASLEDIPAQGARLIRTTDGCVALFRTADNRVFALDDR
                     CPHKGGPLSEGIVHGHQVTCPLHDWVFDLTTGAARGADQGAVRTWPVRVERGRILISA
                     ESLMRGKAA"
     gene            complement(882..>1317)
                     /locus_tag="EYO87_03955"
     CDS             complement(882..>1317)
                     /locus_tag="EYO87_03955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011750678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="nitrite reductase large subunit"
                     /protein_id="HIC65147.1"
                     /translation="KVKLGVSGCPRNCAEATCKDVGIVCVDSGYNISVAGAAGMEVKQ
                     TEHLAATPSEDEAVEIVTAFIQLYREHARYLDRPYKWVAKVGLDWVIAQVVDDPRNRR
                     ALVKRFETSQSVYRRDPWAEHSTPSETPRWAPLADLTLEAAE"
BASE COUNT          210 a          437 c          460 g          210 t
ORIGIN      
        1 atattggcgc tgccgataaa gcccttcatc agcttgttgg cgacatagta atcctcggtc
       61 agcagctgcc ccgagacgta gaaggcgacc gaatccggac cgtgccgggc gacggtccgg
      121 gcaaagcgcc gcgccaccag gtccagcgcc gcgtcccagc cggccgggcg cccgtcgatt
      181 tgcggggcca gaagccggcc ccgcaaaccc acggtttcgg ccagggcggc acccttgacg
      241 caaagccttc cgaaattcgc cggatgatcg gggtcgccgg cgacggtcag gccgccttcc
      301 ggtgtcggtg tcgccagcac gccgcaaccg acgccgcaat agggacaggt cgtgcgaacc
      361 gcgccggccg gggaatgcat gttcatggcg caatctgtcc ttgtggcgcc aggacggctg
      421 tgcgccggac ggtcgcaatc gggccgcgcg acaggccgga caacccgcgg tggcgggtcg
      481 cagcgatcat cgcggtggcg tcgccgcgcg tgatttcgcc aatggcaggc gtgatcatcg
      541 gctttccttt caggcggcct tgccgcgcat gaggctttcg gcggaaatca ggatgcgacc
      601 gcgttccacc cggaccggcc aggtgcggac cgccccctga tcggcgcccc gggccgcccc
      661 ggtggtcagg tcgaacaccc agtcatgcag cgggcaggtg acctgatggc catgcacgat
      721 gccttcggac agcgggccgc ccttgtgcgg gcagcggtca tccagcgcga agacgcggtt
      781 gtcggcggtg cggaacagcg cgacgcagcc atcggtggtg cggatcagcc gtgcgccctg
      841 ggcggggatg tcttccagcg atgcgatatc gacatagcgc gtcattcggc ggcctccagg
      901 gtcagatcgg caagcggggc ccagcggggc gtttccgaag gcgtcgaatg ttcggcccaa
      961 ggatcgcggc gatagaccga ctggctggtc tcgaaccgct tgaccagcgc gcggcggttt
     1021 cggggatcat ccacgacctg cgcgatgacc cagtccaggc cgaccttggc gacccacttg
     1081 tagggccggt cgagataacg ggcgtgttcg cgatagagct ggatgaaggc ggtgacgatc
     1141 tcgaccgcct cgtcctcgga gggggtcgcg gccagatgct cggtctgctt cacctccatg
     1201 ccggcggcgc cggcgacgct gatgttgtag ccgctgtcca cgcagacgat gcccacatcc
     1261 ttgcaggttg cctcggcgca gttgcgcggg cagcccgaaa cccccagctt gaccttg
//
LOCUS       DTVW01000296            1946 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1374514, whole
            genome shotgun sequence.
ACCESSION   DTVW01000296 DTVW01000000
VERSION     DTVW01000296.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1946)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1946)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1946
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1374514"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            1..969
                     /locus_tag="EYO87_03960"
     CDS             1..969
                     /locus_tag="EYO87_03960"
                     /inference="COORDINATES: protein motif:HMM:PF00534.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HIC65148.1"
                     /translation="MGGTEASILRVAASLKPRFDVAHYQNGRRSEHLSDVGRLCPLDQ
                     IDRQPALQHDALIVINRWKVALRLRKLFPQAPILLWLHVYPGRHNRGMGALLRAANID
                     VICVSRSHAKRFLEFVVDGSEPRTHIIYNPIADELVPDTTVRDPNRLLFASSPHKGLA
                     QVFAQFAALKRHLPDLTLAIADPGYLKWDTGPAPEGAVFLGSLSHAALVQEMRSCLCL
                     FYPQTTFAETFGLVLTEANAVGTPVLVHDGLGANAEIVADMQQRVNGHDDADIRARII
                     SWRQSLPRVTANPGFRLSRVTEAWHQLLVQTALTRTHSFKSCRLTA"
     gene            966..>1946
                     /locus_tag="EYO87_03965"
     CDS             966..>1946
                     /locus_tag="EYO87_03965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
                     /protein_id="HIC65149.1"
                     /translation="MNSVYHVPHYALEPEPSQTIPLDVLAKLAFAATAENRGDRPISH
                     SIDLLRNTGLLCDDGSRNPQRTAKALMQIGAANLSVGRLVEGHLNALFLVHRYGTPRQ
                     KETIIRQIEQGAFLGVWAADAMAPVVVDPGGETLRGRKNYASGLGTLSHAIVTVDTGA
                     QVRMALIDVSDPLRADLTTWNMPGMNATASGNFDCHELPLAHITWIGAPGDYLQEPHF
                     VGGVWRIAALQAGASLGLLDAAAAELRRTERMSSEAQKARLMGAVATVWAGMALTDRA
                     AEATAAHASEAEMIVSTSIAARLFTENAALDAIRVVEQSLGLQHFAESSRT"
BASE COUNT          378 a          577 c          570 g          421 t
ORIGIN      
        1 atgggcggca ccgaagcaag catcctccgt gtggctgcat cgctgaagcc tcggtttgat
       61 gtcgcgcact accaaaacgg acgcaggtcc gaacacttgt cggacgtggg aaggctttgc
      121 cctctcgacc agatcgaccg tcaacctgca ttgcaacacg atgctttgat cgtgatcaat
      181 cgttggaagg tcgctctcag gctgcggaaa cttttccctc aagcccctat tttgctttgg
      241 ctgcatgtct atcccggccg acataaccgg gggatgggcg cgttgttgag ggctgcgaac
      301 atcgacgtga tctgcgtttc gcggtcccat gcgaagcggt ttctggaatt cgttgtggat
      361 ggttccgaac cgcgaacgca tatcatctac aatcctatcg cggacgaact tgttcctgac
      421 accacggtgc gcgatccgaa ccggctcctg ttcgcgagtt cgccccacaa ggggttggca
      481 caggtcttcg ctcagttcgc ggccctgaag cgccatcttc cggacctcac cttggcgatt
      541 gccgatccgg gctatctgaa atgggatacc gggccagctc cggagggggc tgttttcctc
      601 ggttccctgt ctcatgccgc gcttgttcag gagatgcgca gttgcctttg tcttttctat
      661 cctcagacca catttgccga aaccttcgga ctcgtcctga cagaagcgaa tgccgtgggt
      721 acccccgtcc tggtccacga tggattgggc gcaaatgccg aaatcgtcgc tgacatgcag
      781 cagcgggtaa atggccacga tgatgccgat atccgtgcgc ggattatcag ctggcgtcaa
      841 tcactcccgc gcgtgactgc caatcccgga tttcgcctgt ctcgggtgac cgaagcgtgg
      901 caccagcttc ttgtccaaac cgccttgacc cgaactcatt ctttcaaaag ctgcaggctg
      961 acggcatgaa ctcggtgtat cacgttcccc attacgcgtt ggagccggaa cccagtcaga
     1021 cgatccccct tgatgttctg gccaaactgg catttgccgc cactgccgag aatcgcggcg
     1081 accgtccgat aagccattct atcgatctgc tgcgaaatac cggacttctt tgcgatgacg
     1141 gttctcgaaa cccacaacga acagccaagg cactcatgca gatcggcgcg gccaatctga
     1201 gtgtcggacg tttggtagag gggcatctca atgcgctgtt ccttgttcat cgctacggaa
     1261 cgcccaggca gaaagaaacg attattcggc agatcgaaca aggcgcgttt ctgggtgtct
     1321 gggccgcgga tgcgatggcg cctgtcgtcg tggacccggg cggcgagacg ctgcgcggga
     1381 ggaaaaacta tgcttcgggt ctcggcactc tctcgcatgc catcgtgaca gttgataccg
     1441 gcgcgcaggt ccggatggcg ctcatcgacg tatccgatcc gctgcgtgcg gatctgacca
     1501 cctggaacat gcccggcatg aacgcgacag catccggcaa tttcgattgt cacgaacttc
     1561 cgctggccca tatcacctgg atcggcgcac ccggcgatta tctgcaggaa ccgcacttcg
     1621 tgggcggcgt ttggcgtatc gcggctttgc aggcaggcgc ttccctggga ctgcttgatg
     1681 cagcggcagc agagcttcgt cggacggaaa gaatgtcatc cgaggctcag aaggcgcggc
     1741 tcatgggcgc agtcgcgacg gtgtgggcgg gaatggcgct gacagatcgt gcggcagagg
     1801 caactgcggc tcatgcctcg gaagccgaaa tgatcgtcag cacctcgatc gcggctcgac
     1861 tgttcacgga aaacgccgcg ctcgatgcca tacgggtcgt cgagcagagt cttggcctgc
     1921 aacattttgc cgaaagttcg agaacc
//
LOCUS       DTVW01000297            3219 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1375000, whole
            genome shotgun sequence.
ACCESSION   DTVW01000297 DTVW01000000
VERSION     DTVW01000297.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3219)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3219)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3219
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1375000"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..859)
                     /locus_tag="EYO87_03970"
     CDS             complement(<1..859)
                     /locus_tag="EYO87_03970"
                     /inference="COORDINATES: protein motif:HMM:PF07690.14"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HIC65150.1"
                     /translation="MRLRLSPPRAAVSVLFFANGLMIGSWAPKLPALMARLGIGEALA
                     GLVVLCLGLGSLLVMPVFGAMVARRGSAAAVGLAGWLAAPTLILITLAPNLALVALAV
                     GLFGGTLGGMDVAMNANAVAVERARRRAIMSSCHGFWSLGGVLGAGIGGVVLARLGEA
                     AHAVLATLVFIAVLVFAQRRLLRDAPAEGTRKTPLRLPRSPLPYVIGIMALFSMVPEG
                     AILDWAAVYLQREMGASLALAGWGFAACAAAMAAMRFAGDAIRQRLGAVSTLRISALA
                     AIAGLGMAGL"
     gene            complement(929..1930)
                     /locus_tag="EYO87_03975"
     CDS             complement(929..1930)
                     /locus_tag="EYO87_03975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycerate dehydrogenase"
                     /protein_id="HIC65151.1"
                     /translation="MPGQSPSRPRMRVAVTRRLPEAVETRMTELFDVALREDDRKLGR
                     DELVALMKDCDVLVPTVTDQIDANMLAQAGERLKLIANYGAGIDHLDVMSARQRGVLV
                     SNTPGVVTEDTADMAMALILAVTRRIPEGLAEMQAGRWGGWAPTAHLGGRVGGRRLGI
                     LGMGRIGQAVARRANVFGMQVHYHNRRRLRPEIEDDLHATWWESLDQMLARMDIVSVN
                     APHTPSTFHLLNARRLKLMKPSAVVVNTSRGEVIDENALTRMLRAGEIAGAGLDVFEH
                     GHEINPRLRELPNVVLLPHMGSATVEGRAEMGEKVIINIKTFADGHRPPDLVVPSML"
     gene            2151..2771
                     /locus_tag="EYO87_03980"
     CDS             2151..2771
                     /locus_tag="EYO87_03980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017929294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65152.1"
                     /translation="MTFQGGKGGAALVLALVLAIAAPTIGGGAARAEPPVPADPQPAQ
                     IRRLADAGIVRSQDGDEAATDRGPVTNLPLPRYVSLKGSEGNARRGPSLSHRIDWVFR
                     HAGMPLRVVAEFGHWRRVEDKDGAGGWVHYAMLSGVRTALVTEDMVQLRSRPNPDADV
                     VARAEVGAILRLGECNPTWCRISGGGQRGWVPKSAIWGVDPDEIRD"
BASE COUNT          536 a         1183 c         1049 g          451 t
ORIGIN      
        1 ccagccccgc catgccaagc cccgcgatcg ccgcaagcgc actgatccgc agggtgctga
       61 ccgcccccag tcgctgccgg atcgcgtcac ccgcgaaacg catcgcggcc atcgccgcgg
      121 cacaggccgc aaagccccag cccgccagcg ccagcgacgc ccccatttcg cgctgcagat
      181 agaccgcggc ccagtcgagg atcgcccctt cgggcaccat gctgaacagc gccatgatcc
      241 cgatcacata gggcaagggc gaacgcggca gccgcagagg cgtcttccgc gtcccctccg
      301 ccggcgcatc ccgaagcagc cggcgctgcg cgaagaccag caccgcgatg aacacaagcg
      361 tcgccaggac cgcatgcgcc gcctcgccca gccgcgccag cacgacaccg ccgatcccgg
      421 cgccaagaac gcccccaagg ctccagaaac cgtgacagga cgacatgatc gcgcggcgcc
      481 gcgcgcgttc gaccgcgacg gcattggcat tcattgccac gtccatgccg ccgagcgtgc
      541 cgccgaacag accgaccgcc agggcaacca gggcaagatt gggcgccagc gtgatcagga
      601 tcagcgtggg cgcggccagc cagcccgcaa ggccgaccgc cgcggccgag ccgcgccgcg
      661 ccaccatcgc cccgaagacc ggcatcacca gcaacgagcc aagtcccagg cacagcacga
      721 ccagcccggc cagcgcctcg ccgatgccca gacgcgccat cagcgccggc aatttcggcg
      781 cccacgaacc gatcatcagc ccgttggcaa agaacaggac cgataccgcc gcgcgcggcg
      841 ggctgagacg cagacgcatc gcaaacctct tcttcgatgt ccaaataccc cgggggaatc
      901 cccggcacgg ggatgggggc agcgccccct acagcatcga cggcacgacc agatccggcg
      961 gcctgtgccc gtcggcgaag gtcttgatgt tgatgatcac cttctcaccc atctcggccc
     1021 gtccctcgac cgtggcgctg cccatatgcg gcagcagcac cacattcggc aattcgcgca
     1081 ggcgcgggtt gatctcgtgg ccgtgttcga acacatccag ccccgcgccc gcgatttcgc
     1141 ccgcgcgcag catccgtgtc agcgcattct cgtcgatcac ttcgccgcgc gaggtgttca
     1201 ccacgacagc cgagggtttc atcagcttca gccgccgcgc gttcaacaga tggaaggtcg
     1261 agggcgtgtg cggcgcgttg accgaaacga tgtccatccg cgccagcatc tgatccaggc
     1321 tttcccacca ggtggcgtgc agatcgtcct cgatctcggg gcgcaggcga cggcgattgt
     1381 ggtaatggac ctgcatcccg aagacattgg cccgccgcgc cacggcctga ccgatccggc
     1441 ccatgcccag gatgcccagc ctgcgcccgc caacccggcc gcccagatgc gcggtgggcg
     1501 cccatccgcc ccagcggcct gcctgcatct cggccagccc ctcaggaatg cgacgggtga
     1561 cggccaggat cagcgccatc gccatgtcgg cggtatcctc ggtcacgacg cccggcgtgt
     1621 tgctgacaag cacaccgcgc tggcgggccg acatcacgtc cagatgatcg attccggcgc
     1681 cgtaattcgc gatcagcttc aatctttcgc ccgcctgggc cagcatgttg gcgtcgatct
     1741 gatcggtcac cgtcggcacc aggacgtcgc aatccttcat cagcgcgacc agttcgtccc
     1801 gtcccagctt gcggtcgtcc tcgcgcagcg ccacgtcgaa caattcggtc atgcgggttt
     1861 cgacggcttc gggcagacgg cgggtgacag ccacgcgcat tctgggtcgc gagggggact
     1921 ggcctggcat gataacctca ctttctcgaa accgtgtcgg cggccgcact tccaaagccc
     1981 ggcggctttt ggcaaactgc ccgcgttgag gggaaggcac aagtcccccg acggcgacaa
     2041 gcgacgggac ggacgaggcc gcggcggaat gcggacgggc cggttccctt ccgtcggagg
     2101 cagggacgac cgctgcggcg ggtctgtcgg acaggaacgg acgggacatg atgacatttc
     2161 aagggggcaa gggcggcgcg gcgctggtgc tggcgctggt gctggcgatc gcggcgccga
     2221 cgatcggtgg cggcgcggcc agggccgagc cacccgtgcc ggcggatccg caaccggcgc
     2281 agatccggcg tctggcggat gccggcatcg tccggtctca ggatggcgac gaggccgcga
     2341 ccgaccgggg ccccgtgacc aacctgccgc tgccgcgcta tgtcagcctg aagggcagcg
     2401 aaggcaacgc ccgccgcggc cccagcctgt cgcaccggat cgactgggtg tttcgccatg
     2461 ccgggatgcc gctgcgcgtg gtggccgaat tcggacattg gcgccgggtc gaggacaagg
     2521 acggtgcggg cggatgggtc cactacgcca tgctctccgg tgtccgcacg gcgcttgtga
     2581 ccgaggacat ggtccagctg cgcagccggc ccaacccgga cgccgatgtc gtcgcccgcg
     2641 ccgaggtcgg ggccatcctg cggctgggcg agtgcaatcc gacctggtgc cgcatctcgg
     2701 gcggcggcca gcgtggctgg gtgcctaaat cggcaatctg gggcgtcgat cccgacgaga
     2761 tccgggactg agccgcgacc gggcggcccc gttcggcccc cggaccgcca gcgggcgtcg
     2821 tcgcggccgc cgcggtcttc gatgatccgc agattgccgt catccgcctg cggccgcgcg
     2881 gaccgcgcag attctgcgga tcgcggtcgc cgcagaatcc cggacgcggg tggcagcgtc
     2941 cgtcgatcag cggcagctgc gcgccctgtc ttcctgcatg cagcccgcag ggatccggac
     3001 cgacaggaac aacgcgccat gcctgatcat cttccgcgtc tccctgttgc cggacgacgc
     3061 gctcagatca gcccgcgccc ccgcaacaaa gcatccacac ccggcatccg gtccctgaaa
     3121 tccagccata gccggtcggc gggggccgag ccgccctttg acaggatggt ccgttccagt
     3181 ttccgggcgg tgtgcctgtc gaagatgtcg cccgcctcc
//
LOCUS       DTVW01000298            1437 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1376436, whole
            genome shotgun sequence.
ACCESSION   DTVW01000298 DTVW01000000
VERSION     DTVW01000298.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1437)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1437)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1437
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1376436"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            248..631
                     /locus_tag="EYO87_03985"
     CDS             248..631
                     /locus_tag="EYO87_03985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008225172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HIT domain-containing protein"
                     /protein_id="HIC65153.1"
                     /translation="MPRAYDDDNIFARILRGEIPNDTVAENDHALAFRDIAPKAPSHV
                     LVIPKGRYVSFEDFAAHGTEAEITGFMRLCAEVVAIEGLGLEAGNQGFRAITNAGAHG
                     VQEVAHFHLHIMGGRMMGPMLSLRD"
     gene            complement(635..>1437)
                     /locus_tag="EYO87_03990"
     CDS             complement(635..>1437)
                     /locus_tag="EYO87_03990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009572205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIC65154.1"
                     /translation="LGPNGAGKSTLINILAGLVNKSAGKVGIWGFDQDVNPRQSRAAI
                     GVMPQELNMDPFFSPRASLEVQAGLYGVPKSERWTDELLDLVGLRDQANAYARNLSGG
                     MRRRLLLAKALVHRPQILVLDEPTAGVDITLREMLWQNVRRLNEAGMTVILTTHYLGE
                     AEQMCDEIAIINHGELIVRQGTRELLARTDGKTLVIDAGGRIEIPPLPEGASAEWRAD
                     GRLAISYPPSRIRADQLLDALRGAGVPIIDVASEQPDLEDVFVEMTRG"
BASE COUNT          245 a          468 c          466 g          258 t
ORIGIN      
        1 acgaggccga gcaggtgcgc gacatgggat tcgagaggtt tcaggtgctg tcgaacgacc
       61 agggcgcgga tgaaaacgcc gccgccattg ccggtttcct ggacatcgac cgggcagccg
      121 gcgccgccct gatcgcgcat ctggatctgc gctgagccgg gcggcggggc attgtgaagc
      181 gtgccacgtc ctgacaggat gccgccagcc aggggcctgc gcgccccgtg ccgagaaagg
      241 gattgccatg ccacgtgcct atgacgacga caacatcttc gcaagaatcc tgcgcggcga
      301 gattccgaac gataccgtgg ccgagaacga tcacgccttg gcgtttcgcg acatcgcgcc
      361 caaggcaccc tcgcatgtgc tggtgatccc caagggcagg tatgtcagtt tcgaggattt
      421 cgcggcccat ggcacggaag ccgagatcac cggtttcatg cgcctttgcg ccgaggtggt
      481 ggccatcgag gggctgggcc tggaagccgg caaccagggc tttcgcgcca tcaccaatgc
      541 cggggcacat ggcgtgcagg aggtggcgca tttccacctc catatcatgg gcggccggat
      601 gatgggaccg atgctcagcc tgcgggactg aatttcagcc gcgtgtcatc tcgacgaaga
      661 catcttccag atcgggctgt tcgctggcca cgtcgatgat cggcacgccc gctccgcgca
      721 gcgcgtccag caactgatcg gcccggatcc gcgagggcgg atagctgatc gccagccgcc
      781 cgtctgcccg ccattcggcg cttgcgcctt cgggcagggg cgggatctcg atccgtccgc
      841 cggcatcgat caccagcgtc ttgccatccg tgcgcgccag caattcgcgg gtgccctggc
      901 ggacaatcag ttcgccatgg ttgatgatcg cgatctcgtc acacatctgc tcggcctctc
      961 ccagataatg cgtggtcagg atgacggtca tgccggcctc gttcaggcgg cggacattct
     1021 gccacagcat ttcgcgcagg gtgatgtcca cacctgccgt gggttcgtcc aggaccagga
     1081 tctgcgggcg gtggaccagc gccttggcaa gcagcagccg ccggcgcatc ccgcccgaaa
     1141 gattgcgcgc ataggcattg gcctggtccc tcagcccgac gagatccagc aattcgtctg
     1201 tccagcgttc ggatttcggc accccgtaaa gacccgcctg cacctccagg ctggcgcggg
     1261 ggctgaagaa cgggtccatg ttcagttcct gtggcatgac cccgatcgcg gcgcgggact
     1321 ggcgcgggtt cacatcctga tcgaaacccc agatgccgac cttgccggcg ctcttgttga
     1381 ccagacccgc gaggatgttg atcagggtgg acttgccggc cccgttcggc cccagca
//
LOCUS       DTVW01000299            1445 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1376461, whole
            genome shotgun sequence.
ACCESSION   DTVW01000299 DTVW01000000
VERSION     DTVW01000299.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1445)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1445)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1445
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1376461"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            78..1016
                     /locus_tag="EYO87_03995"
     CDS             78..1016
                     /locus_tag="EYO87_03995"
                     /inference="COORDINATES: protein motif:HMM:PF01717.16"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine synthase"
                     /protein_id="HIC65155.1"
                     /translation="MRRLSFQSQMTEAISGFGQWDLDAFLWGDWFAEDGAPPVSRQRP
                     EKLGVTGKLRSKRFLSAQEYSFLAANTSQIPKITLPSPGLFANFYDPDLSGPVYPTLE
                     SLIEDLVDILAAEVRELARLGARYIQIDAPHYPLLMQSETRAFYEGLGWDLEQWLSLG
                     IAADNAVMDAAPDVCFALHLCRGNQQGRWLAEGGYDAIARQIFAGTHATRLLLEYDDR
                     RSGDFAPLAQVPEDKWVVLGLISTKHPELEDQDMLCRRIEAAARYVGLDRLAISPQCG
                     FSPSVLPGGLSQTDQAAKLDLLVSTARKMWGYTKDQ"
     gene            complement(1010..>1445)
                     /locus_tag="EYO87_04000"
     CDS             complement(1010..>1445)
                     /locus_tag="EYO87_04000"
                     /inference="COORDINATES: protein motif:HMM:PF07683.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HIC65156.1"
                     /translation="VTFDALMKPASGADARRRGLLGEEEDAPLHDADIASCWLQFGAP
                     MARADFEAAFAGLLDQFGPDILRAKGLVEFAGNGPSFVQYVGGGVLQIEAANLAPDPA
                     RPSGIVVIGSNVTTGALADIFAAHGLGQYFIKEDHSGHAHAH"
BASE COUNT          269 a          477 c          441 g          258 t
ORIGIN      
        1 ctgccgaaga ccgcgcggtt cgagacgcca tccaattgca ggaatccgcc gggctcgaaa
       61 taatcaccga cggagaaatg cgccgcctgt cctttcaaag ccagatgacc gaggccattt
      121 ccgggttcgg tcaatgggac ctggatgcct ttctttgggg cgactggttc gccgaagacg
      181 gcgccccgcc agttagccgc caacggcccg aaaagcttgg cgtcaccggg aaattgcggt
      241 caaaacggtt cctgtcggcc caggaatatt cgtttctggc cgccaacacc tcccaaatcc
      301 ccaagatcac cctgcccagc cccggcctgt tcgcgaattt ctacgacccg gacttgtcgg
      361 gcccggtcta tcccaccctg gaatccctga tcgaagacct ggttgatatc ctggccgccg
      421 aggtgcgcga gctggcccgc ctcggcgccc gttatatcca aatcgacgcg ccccactatc
      481 ccctgttgat gcagtccgaa acccgcgcct tttacgaagg cttgggctgg gatttggagc
      541 aatggctaag cctcgggatc gccgccgaca atgcagtcat ggacgcggcg cccgacgtgt
      601 gtttcgccct ccatctctgc cgcggcaacc agcaggggcg ctggctggcg gaaggcggct
      661 acgatgccat cgcaaggcag atatttgccg gcacccacgc cacgcgcctg ctcctggaat
      721 atgacgatcg gcgctcgggc gattttgcgc ccctggccca ggtgccggag gataaatggg
      781 tggtgctggg cctgatctcc accaagcacc cggaacttga agaccaggac atgctgtgcc
      841 gccgcatcga ggcggccgcc cgctacgtag ggctggaccg gctggcgatc agcccccaat
      901 gcggtttctc gccctcggta ttgcccggcg gcctctcaca aaccgatcag gccgccaagc
      961 tggaccttct ggtcagcacc gccaggaaga tgtggggcta taccaaggat cagtgagcat
     1021 gtgcatgtcc gctgtgatcc tctttaataa aatattggcc gaggccgtgg gcggcgaaaa
     1081 tatcggcgag ggctccggtg gtgacgttgg atccgataac cacgatgccg gacggccggg
     1141 ccgggtccgg ggcaagattt gcggcctcga tctgcaggac gccgccgcca acatattgca
     1201 cgaatgacgg cccgttgccg gcgaattcga caaggccctt ggcgcgcagg atgtccggcc
     1261 cgaactgatc cagcaggccc gcgaaggccg cttcgaagtc cgcccgcgcc atgggcgcgc
     1321 cgaattgcag ccagcagctg gcaatgtcgg cgtcgtgcag gggggcatcc tcctcttcgc
     1381 ccaacaatcc ccggcgcctg gcatcggcgc ccgatgcggg cttcatcagc gcgtcaaagg
     1441 tcaca
//
LOCUS       DTVW01000300            1287 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1378378, whole
            genome shotgun sequence.
ACCESSION   DTVW01000300 DTVW01000000
VERSION     DTVW01000300.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1287)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1287)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1287
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1378378"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..592)
                     /gene="hisB"
                     /locus_tag="EYO87_04005"
     CDS             complement(<1..592)
                     /gene="hisB"
                     /locus_tag="EYO87_04005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazoleglycerol-phosphate dehydratase HisB"
                     /protein_id="HIC65157.1"
                     /translation="MRKATITRNTAETRIEVAIDLDGTGTYDNRTGVGFFDHMLDQLS
                     RHSLIDMTIRATGDLHVDDHHTIEDTGIAIGQALTKALGDKTGIRRYGSFLLAMDDAL
                     VRAALDLSGRPYLVWNVDFPSARIGGFDTELVREFFQALATHGGISLNLARLDGINSH
                     HIAEAAFKAVARALREAVEPDPRMSGALPSTVNVRIL"
     gene            complement(638..>1287)
                     /locus_tag="EYO87_04010"
     CDS             complement(638..>1287)
                     /locus_tag="EYO87_04010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008280234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TrkH family potassium uptake protein"
                     /protein_id="HIC65158.1"
                     /translation="LVGTAALIVIGVGLTAILEWNNPLTLAQYDGPVARMTVAWFQGV
                     TPRTAGFNTVDIGGLHDSTSLLYMALMIIGAGPTSTGGGLKVTTIVVMLLATLAFFRR
                     RTEIWAFGRSIGLDEVLKVMALIAIASVLIFTAVFLMMASHDGYFLDISFEVASAFGT
                     TGLSRGYTSELNPFGRIIIITVMFLGRVGPLTLGFFLATRTTPRVRYPEGQVHLG"
BASE COUNT          249 a          413 c          416 g          209 t
ORIGIN      
        1 aaagaattcg cacgttcacg gtcgagggca gggcgccgga catgcgcggg tcgggttcga
       61 ccgcctcgcg cagcgcgcgg gcgaccgcct tgaaggcggc ctcggcgatg tgatgggaat
      121 tgatcccgtc caggcgcgcg agattcaggc tgattccgcc atgcgtggcc agcgcctgga
      181 aaaattcgcg caccagttcg gtatcgaagc cgccgatcct tgccgacggg aaatcgacgt
      241 tccagaccag atagggccgc cccgacaaat ccagcgcggc gcggaccagc gcatcatcca
      301 tcgccaggag aaagctgccg tagcggcgga tgccggtctt gtcgcccaga gccttggtca
      361 gcgcctgacc gatggcgatg ccggtatcct cgatcgtgtg gtggtcgtcg acatgcagat
      421 cgcccgtcgc ccggatcgtc atgtcgatca gggaatggcg cgacaactgg tccagcatgt
      481 gatcgaaaaa acccacgccg gtccggttgt cataggttcc ggtgccgtcc aggtcgatcg
      541 ccacctcgat ccgggtctcg gcagtgttgc gggtgatggt cgccttgcgc atggaatttc
      601 ctttcacgac gcgggcctta tagggcggcg cggcggatca gccaagatgg acctgtcctt
      661 cgggatagcg cacgcggggc gtcgtgcgcg tcgccaggaa aaagcccagt gtcagtggcc
      721 cgacccggcc caggaacatc accgtgatga tgatgatccg gccgaagggg ttcagttccg
      781 aagtgtagcc gcgcgacagg ccggtagtgc cgaaggccga ggcgacctcg aagctgatgt
      841 cgagaaaata gccgtcgtgg ctggccatca tcagaaacac cgccgtgaag atcagcaccg
      901 aggcgatggc gatcagcgcc atcaccttca gcacctcgtc aagcccgatg gaccgcccga
      961 aggcccagat ctcggtccgg cggcggaaga aggccagggt cgccagcaac atcaccacga
     1021 tggtcgtgac cttcagcccg cccccggtcg aggtcgggcc ggcgccgatg atcatcagcg
     1081 ccatgtagag caacgaggtc gaatcgtgta gcccaccgat atcgacggtg ttgaagccgg
     1141 ccgtgcgggg cgtcacaccc tggaaccagg ccaccgtcat ccgcgcgacc gggccgtcat
     1201 attgcgccag cgtcagcgga ttgttccatt ccaggatcgc cgtcagaccc accccgatca
     1261 cgatcagcgc cgccgttccc accagca
//
LOCUS       DTVW01000301            2167 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1383366, whole
            genome shotgun sequence.
ACCESSION   DTVW01000301 DTVW01000000
VERSION     DTVW01000301.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2167)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2167)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2167
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1383366"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..125)
                     /locus_tag="EYO87_04015"
     CDS             complement(<1..125)
                     /locus_tag="EYO87_04015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome partitioning protein ParB"
                     /protein_id="HIC65159.1"
                     /translation="MSDARTAKKGLGRGLSALMADIDLGETNVATAPSRDRSLIP"
     gene            complement(125..910)
                     /locus_tag="EYO87_04020"
     CDS             complement(125..910)
                     /locus_tag="EYO87_04020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HIC65160.1"
                     /translation="MSRYSIVAIANQKGGVGKTTTAINLGAALAMAGHRTILVDLDPQ
                     GNASTGLGIDEDRRQLTVYDLLAGEESLQDCAIPTQIDNLHIVPATADLSSADVDLSQ
                     TQDRTRLLRRKLEGAPDGSIVLIDCPPALGLLTVNAMVAADSVLVPLQAEFYALEGLS
                     QLLTTVKHVRASGNPALRIAGILLTMSDYRNNLSQQVEADARNTLGDLVFPTVIPRNV
                     RVSEAPSHAQPVLLYDPASKGSGAYRQFAEEFAARLKIVREEV"
     gene            complement(903..1493)
                     /gene="rsmG"
                     /locus_tag="EYO87_04025"
     CDS             complement(903..1493)
                     /gene="rsmG"
                     /locus_tag="EYO87_04025"
                     /EC_number="2.1.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011746355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(527)-N(7))-methyltransferase
                     RsmG"
                     /protein_id="HIC65161.1"
                     /translation="MHVSRETWDELDVYAAMIRKWNARINLVAPSSVPHLQERHIADS
                     LQLVELSQPEAGLWADLGSGGGFPGLVAAIACRDRMTDFILVESDQRKSAFLRSVIRE
                     LGLKRAEVISARIEDLNSLKAAYISIRALAPLPRLMPYLVQHLEKNGQAWLMKGRQWQ
                     AELDETASHWRFSVESHPSKTDQSAAILKIWGLDHV"
     gene            complement(1493..>2167)
                     /locus_tag="EYO87_04030"
     CDS             complement(1493..>2167)
                     /locus_tag="EYO87_04030"
                     /inference="COORDINATES: protein motif:HMM:PF13932.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis enzyme MnmG"
                     /protein_id="HIC65162.1"
                     /translation="AIKFSRSESYIGVMIDDLVSRGVTEPYRMFTSRAEFRLTLRADN
                     ADRRLTRMGRNIGCVGDERWRHFDSREKRYIAGRDIAEARAFSPNELSGRGLHVRQDG
                     QRRSAFELMGMAAISDAQIVEIMPELSAVHPETMAQLRADALYHQYLDRQERDAKALK
                     NDENIVLPTSLDYFTMSGLSGELAAKLSEARPESLASAARIEGMTPAALTLILAMAKN
                     ERCRTA"
BASE COUNT          431 a          651 c          654 g          431 t
ORIGIN      
        1 atcggaatca ggctgcggtc ccgcgacggc gctgtcgcga cgttggtttc gcccagatcg
       61 atatcggcca tcagcgccga taacccccgt cccaggccct tcttggctgt tctggcatcc
      121 gacatcacac ttcctctcgc acgatcttca ggcgcgccgc gaattcctcg gcgaattgac
      181 gataggcacc actgcccttc gaggccgggt catagagcag cacgggctgg gcatgcgacg
      241 gagcctccga aacgcggaca ttgcgcggaa tgacggtggg aaagaccaga tcgcccagcg
      301 tgttgcgggc atcggcctcg acctgctgcg aaagattgtt gcggtagtcg gacatggtca
      361 gcagaatacc tgcgatccgc agggccggat taccgctggc ccggacgtgc ttgaccgtcg
      421 tcaagagctg cgacagcccc tcgagcgcat agaactccgc ctgcagcggg acaagaaccg
      481 aatcggcggc aaccatggca ttgacggtga gaaggccgag ggccggcgga cagtcgatca
      541 ggacaatgct gccatcaggt gcaccctcaa gcttgcggcg aagcaggcgg gtgcggtcct
      601 gagtctggga cagatccaca tcggccgaag aaagatcggc agtcgcgggc acgatgtgga
      661 ggttgtcgat ctgggtcgga atggcgcaat cctgaagact ttcctcgccg gcaagcaggt
      721 catagacggt caactgccgg cgatcctcgt cgatgcccag cccggtggaa gcgttgccct
      781 gcggatcgag atcgacaaga atcgtccgat gcccggccat cgcaagggcc gcgcctaggt
      841 tgatcgcagt cgtggtcttg ccgacgccac ctttctggtt cgcgattgcc acgatactgt
      901 atctagacat gatcaagccc ccagattttg aggatagccg cagactgatc tgtcttgctg
      961 ggatggctct cgacggagaa gcgccagtgt gacgccgtct cgtcaagttc cgcctgccac
     1021 tgcctgccct tcatcaacca cgcctgcccg ttcttttcga gatgttgcac cagatatggc
     1081 atgagacggg gaagcggggc aagcgcccga atgctgatat aggcggcttt cagcgaattc
     1141 agatcctcga tgcgggcaga gatgacctct gcccgcttca ggccgagttc gcgaatgacg
     1201 cttcgcagaa aagccgattt tcgctgatcg ctttcgacga gaatgaaatc cgtcatgcga
     1261 tcgcggcatg cgatcgccgc gaccaggccg ggaaagccgc ctccgctacc taaatcggcc
     1321 caaagaccag cctcgggctg gctgagttcg acaagctgca ggctgtcggc aatatgccgc
     1381 tcttgcagat ggggaacgga tgacggcgcc acgagattga tccgagcatt ccacttccgg
     1441 atcatagcgg catagacatc cagttcatcc catgtttcac gtgaaacatg catcatgcgg
     1501 tccggcaccg ctcgttcttt gccatggcaa ggatcagggt cagcgcggcg ggggtcatgc
     1561 cttcaattct ggcggccgag gcgaggctct ctggccgcgc ttccgaaagc ttcgcggcca
     1621 gttcgcccga aagtccggac attgtgaagt agtccaggga ggttgggagc acaatgtttt
     1681 cgtcgttttt cagcgccttc gcgtcacgtt cctggcgatc gagatattga tggtagagag
     1741 cgtcagcgcg caactgagcc atggtttccg ggtgaaccgc cgacaattct ggcatgattt
     1801 caacaatctg cgcatcgctg atcgccgcca ttcccatcaa ttcgaatgcc gagcgccttt
     1861 ggccgtcctg tcgaacatga agccccctgc ctgaaagctc gttcggcgaa aaggctcgcg
     1921 cctcggcgat gtcgcgtccg gcgatatacc gcttttcccg gctgtcgaaa tgccgccagc
     1981 gctcatcgcc gacgcagccg atgttccggc ccatacgggt cagccggcga tcggcgttgt
     2041 cggcccgaag cgtcaagcga aattctgctc tggaggtgaa catgcggtaa ggttcggtca
     2101 caccccggga caccagatcg tcgatcatga cgccgatata gctttctgat cggctgaatt
     2161 tgatcgc
//
LOCUS       DTVW01000302            2878 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1385330, whole
            genome shotgun sequence.
ACCESSION   DTVW01000302 DTVW01000000
VERSION     DTVW01000302.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2878)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2878)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2878
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1385330"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..543
                     /locus_tag="EYO87_04035"
     CDS             <1..543
                     /locus_tag="EYO87_04035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010398430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
                     /protein_id="HIC65163.1"
                     /translation="GCRVADQAVQVHGGMGYIEETGAAQYLRDVRITPIYEGTNGIQA
                     MDLVGRKLSDEGEAAMRLLDEVLDCAKSAQADHPRLANDLWQAAETLREATQTLLDRD
                     LPDRFAGAVPYLTAFARVLGGCYHLRAAQAGGGAHLALARIFMARVLPRNSGDLAEAL
                     AGLDDLSAISDAALAGDFGA"
     gene            579..1562
                     /locus_tag="EYO87_04040"
     CDS             579..1562
                     /locus_tag="EYO87_04040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009813968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HIC65164.1"
                     /translation="MAVEVAPGILWMRLPLPMALDHVNVYALDDGDGWTIVDTGFDTG
                     RGRAIWDVLRAGPLAGRRINRVVGTHHHPDHIGLAGWFMDRDGAELAISRTAWLMARM
                     LQLDVQERPSPQALDFWRRAGMPPAMLAERAAQRPYNSADVVHPLPLGFTRIAEGDEI
                     AVGGRRWRVAMGHGHAPCHATLWSLDDDLVIGGDQLLPSISPNLGVYPTQPEADPVGE
                     WLESCTRLAGLARPGHLVLPGHKLPFTGLPDRLRQLIDNHHGALRRMREALAERPRSA
                     VECFDILFKRRIGPAEYGLALVEAVAHVNHLRRSGAIRAVGTRQGATLWGA"
     gene            1625..1777
                     /locus_tag="EYO87_04045"
     CDS             1625..1777
                     /locus_tag="EYO87_04045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_041529744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aa3-type cytochrome c oxidase subunit IV"
                     /protein_id="HIC65165.1"
                     /translation="MASEHDNQDHKHGSMDISQQQATFHGFIRFATWVVILSLLALIF
                     MALTNA"
     gene            1798..2424
                     /locus_tag="EYO87_04050"
     CDS             1798..2424
                     /locus_tag="EYO87_04050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010398437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65166.1"
                     /translation="MKRRVFLAASLPALLTACGADNIWASDERVRAARYVSPEPPSIA
                     LFTVIGIPRGQGGHSALMINGSQRVIYDPAGSWSHPQIPERYDVLYGITDNFKRFYID
                     YHARSTFWVAQDTVPVSREVADLAIRRAEENGAANKAFCAIETSAVLRGVPGFEGAPF
                     GFSPIRLRNWFLTLPGVQSQKFQDGDPANNHDVLIRQKNGVLTGYPRT"
     gene            complement(2409..2744)
                     /locus_tag="EYO87_04055"
     CDS             complement(2409..2744)
                     /locus_tag="EYO87_04055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012179740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AzlD domain-containing protein"
                     /protein_id="HIC65167.1"
                     /translation="MSPVTSDLSIWIVILALGIGTFLIRWSFLATLGDRDLPPIVIRM
                     LRYTAVAVLPALVAPLVMWPAATGGQPEPARLSAAAVTIAVGVLTKNVILSIVAGATV
                     LFAMLYVLG"
     gene            complement(2741..>2878)
                     /locus_tag="EYO87_04060"
     CDS             complement(2741..>2878)
                     /locus_tag="EYO87_04060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010140146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HIC65168.1"
                     /translation="GVAIVLALVFAGLPSGLGLMIAALAGMATGALVETVMERGKATQ
                     G"
BASE COUNT          472 a          944 c         1012 g          450 t
ORIGIN      
        1 ggctgccgcg tcgccgatca ggcggtgcag gttcatggcg gcatgggcta catcgaggaa
       61 accggggcgg cgcaatatct gcgcgacgtg cggatcacgc cgatctacga gggcaccaac
      121 ggcattcagg cgatggacct ggtcgggcgc aagctgtcgg acgagggcga ggcggcgatg
      181 cgcctgctgg acgaggtgct ggattgcgcc aaatcggcgc aggccgatca tccgcgactg
      241 gccaatgacc tgtggcaggc ggccgaaacc ctgcgcgagg cgacgcagac gctgctggac
      301 cgcgatctgc cggaccggtt cgcaggggcc gtgccctatc tgacggcctt cgcgcgggtt
      361 ctgggcgggt gctatcacct gcgggcggcg caggcgggtg gtggggcgca tctggcactg
      421 gcgcggatct tcatggcccg cgtgctgccg cgcaactcgg gcgatctggc cgaggcgctg
      481 gccgggctgg acgacctctc ggcgatcagc gatgcggcgc ttgccggcga tttcggcgcg
      541 tgatccacta tccctggcag gagcccccgg cggagggcat ggcggtcgag gtcgcgccgg
      601 gcatcctgtg gatgcggctg ccgctgccga tggcgctgga tcacgtcaat gtctatgcgc
      661 tggacgacgg cgatggctgg acgattgtcg ataccggctt cgacaccggt cgcggccgcg
      721 cgatctggga cgtgctgcgg gctggtccgc tggcggggcg gcggatcaac cgggtggtcg
      781 ggacgcatca ccatccggat catatcgggc tggcaggctg gttcatggat cgcgacggcg
      841 ccgaactggc catcagccgc actgcctggc tgatggcgcg gatgctgcaa ctggacgtgc
      901 aggaacggcc cagcccgcag gcgctggatt tttggcgccg cgccggaatg ccgcccgcga
      961 tgctggccga acgcgcggcg cagcggccct ataactcggc cgatgtcgtc catccgctgc
     1021 ccctcgggtt cacgcgcatc gccgagggag acgagatcgc ggtgggcggg cggcgctggc
     1081 gggttgcgat gggccatggc catgcgccct gccatgcgac cctctggtcg ctggatgacg
     1141 atctggtgat cgggggcgac cagcttctgc cctcgatctc gcccaatctc ggcgtctatc
     1201 cgacccagcc cgaggccgat cccgtcggcg aatggctgga aagctgcacc cggctggccg
     1261 gtctggcgcg gcccggtcac ctggtcctgc ccggccacaa gctgcccttc accgggctgc
     1321 ccgaccggct gcggcaattg atcgacaacc atcacggcgc gttgcggcgg atgcgcgagg
     1381 cgctggcaga aaggccgcgc agcgcggtcg agtgtttcga catcctgttc aagcgccgca
     1441 tcggtccggc ggaatacggg ctggcgctgg tcgaggcggt ggcgcatgtg aaccatctgc
     1501 ggcgatcggg cgcgatccgg gccgtcggca caaggcaggg tgcgaccctt tggggggcgt
     1561 gacaggacgg cgggcatccg ctatggcagg acaggaccag gaaagatcgc ggagagcagg
     1621 gaacatggcg agcgaacacg acaatcagga tcacaagcac ggctcgatgg atatcagcca
     1681 gcagcaggcg accttccacg ggttcatccg tttcgcgacc tgggtggtga tcctgtcgct
     1741 gctcgccctg atcttcatgg cgctgaccaa cgcctgaacc attcggaacc aatccccatg
     1801 aaaagacgtg tcttcctggc ggcctcgctg ccggcccttc tgacagcctg cggcgccgac
     1861 aacatctggg ccagcgacga gcgggtgcgc gctgcccgct acgtctcgcc cgagccgcct
     1921 tcgatcgcgc tgttcaccgt gatcgggatt ccgcgcggcc agggcgggca ttcggcactg
     1981 atgatcaatg gcagccagcg ggtgatctat gatccggccg gcagctggag ccatccgcag
     2041 atccccgaac ggtatgacgt gctttatgga attaccgaca atttcaagcg gttctatatc
     2101 gattatcacg cccgcagcac gttctgggtc gctcaggaca cggttccggt cagccgcgag
     2161 gtcgccgacc tggcgattcg ccgggccgag gagaacggcg ccgcgaacaa ggcgttctgc
     2221 gcgatcgaaa ccagcgccgt gctgcgcggc gtcccgggat tcgaaggcgc gcccttcggt
     2281 ttctcgccga tcaggctgcg caactggttc ctgaccctgc cgggcgtgca gtcgcagaaa
     2341 ttccaggacg gcgacccggc caacaaccat gacgtcctga tccgccagaa gaacggcgtg
     2401 cttaccggct atcccagaac gtaaagcatc gcgaacagca ccgtcgcgcc tgccacgatc
     2461 gaaaggatca cgttcttcgt cagcacgccg acggcgatcg tgaccgcggc ggcggacagg
     2521 cgggcgggtt cgggctggcc cccggtcgcg gcgggccaca tcaccagcgg cgcgaccagc
     2581 gcgggcagaa ccgcgacggc ggtatagcgc agcatccgga tgacgatggg cggcagatcg
     2641 cggtcgccca gcgtcgcgag aaacgaccag cggatcagga atgtcccgat cccgagcgcc
     2701 aggatcacga tccagatgga caggtccgag gtgaccgggc tcatccctgg gtcgcctttc
     2761 cgcgttccat gaccgtctcg accagcgcgc cggtcgccat gcctgcgagg gccgcgatca
     2821 tcagccccag ccccgagggc aggcccgcga agaccagcgc cagcacgatc gccacccc
//
LOCUS       DTVW01000303            1038 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1388594, whole
            genome shotgun sequence.
ACCESSION   DTVW01000303 DTVW01000000
VERSION     DTVW01000303.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1038)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1038)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1038
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1388594"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(92..>1038)
                     /locus_tag="EYO87_04065"
     CDS             complement(92..>1038)
                     /locus_tag="EYO87_04065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_879322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HIC65169.1"
                     /translation="MGNACVLKPAEDACLTPLRLAQILCDAGLPAGALNCVPGRGDRA
                     GAALAAHRGIDFISFTGSPEVGAAVQQAAAGHHIGCTLELGGKSPQILFDDADLDRAM
                     PVVLKAITQNAGQTCSAGARLLVQDGIAEAVTERLRRDFPALTAAPQDADRDLGPLIS
                     PKQMQRVRRFCDRADADGIPLIAEGRIDPQAARDGNFVAPRAYGPVPRDHPLAQQEVF
                     GPILSLMTFSDEADAIALANDTDYGLVAGVWSRDGSRAIRVARQIMVGQVFVNAYGAG
                     GGIELPFGGMKKSGHGREKGFDALYEFAATRTMVIRHD"
BASE COUNT          162 a          370 c          354 g          152 t
ORIGIN      
        1 cccggcgcgc cagcgcgcgc cgggttgtcg ctgcgggcgc cgggattcgg cgtccaagcc
       61 gcgcacccgg cggtggtgcc gacgccgacc cctagtcgtg gcggatcacc atggtccggg
      121 tcgcggcaaa ttcgtagagc gcatcgaacc ccttttcgcg gccatggcct gatttcttca
      181 tgccgccgaa cggcaactcg atcccgccgc ccgcgccata ggcgttcacg aagacctgcc
      241 cgaccatgat ctgccgggcg actcggatgg cgcggctgcc atcgcgcgac cacaccccgg
      301 cgacaaggcc gtaatcggta tcgttggcaa gggcgattgc atcggcttcg tcggaaaagg
      361 tcatcaacga caggatcggg ccaaacacct cctgctgcgc cagcgggtga tcgcgcggaa
      421 ctgggccgta ggcgcggggg gcgacgaaat tgccgtcccg cgcggcctgc ggatcgatcc
      481 ggccctcggc gatcagcggg atgccatcgg catcggcgcg atcgcaaaag cggcggaccc
      541 gctgcatctg tttcggcgag atcagcggcc cgagatcgcg atccgcatcc tgcggggctg
      601 cggtcagggc gggaaaatcg cgacgcaggc gttccgtcac cgcctcggcg atgccgtcct
      661 gaaccagaag ccgcgccccg gccgaacagg tctgtcccgc attctgggtg atcgccttca
      721 ggaccaccgg catggcgcgg tccagatcgg catcgtcgaa caggatctga ggcgatttgc
      781 cgcccagttc cagcgtgcag ccgatatggt ggccggccgc cgcctgctgg accgccgcgc
      841 ccacctcggg gctgccggtg aagctgatga agtcgatgcc gcggtgcgcg gccagcgccg
      901 ccccggcccg atcaccgcgt cccggcacgc agttcagcgc cccggcgggc agccccgcat
      961 cgcacaggat ctgggccagg cgcagcggcg tcaggcaggc atcctcggcc ggtttcagca
     1021 cgcaggcatt gcccatcg
//
LOCUS       DTVW01000304            1911 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1389041, whole
            genome shotgun sequence.
ACCESSION   DTVW01000304 DTVW01000000
VERSION     DTVW01000304.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1911)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1911)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1911
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1389041"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..287
                     /locus_tag="EYO87_04070"
     CDS             <1..287
                     /locus_tag="EYO87_04070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005849405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="3-deoxy-8-phosphooctulonate synthase"
                     /protein_id="HIC65170.1"
                     /translation="IMARSGYPVIMDATHSVQQPGGQGGSSGGQREFAPVMARAAVSL
                     GVAGVFIETHEDPDNAPSDGPNMIPLQQMPALIASLMAFDRLAKADPLTA"
     gene            284..1597
                     /locus_tag="EYO87_04075"
     CDS             284..1597
                     /locus_tag="EYO87_04075"
                     /inference="COORDINATES: protein motif:HMM:PF00924.16"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel"
                     /protein_id="HIC65171.1"
                     /translation="MIRALLLSILLVLPFAAVSQAREDGGVITAPSGTIPVGDNAASD
                     AAIRTRIDSILSQVSAFDKVRARVDAGIVRLTGEVTEQVQIDRLDALMARVDGVVAIQ
                     DDVILTTDIGLRLGTVRDRFLQRLNQVIAGLPFVALGLVVGAVILLVGSWISRRERTL
                     ARVAPNPFIAGFLAQVIRLIAWIVALVVALDLMGATALLGTLLGAAGIFGLSLSFAAR
                     DTIEGLVATILLSLRQPFGPNDLIEVNDQRGRVIRMTSRGTTLLTLDGNHIRIPNQII
                     YKAVLTNYTRNPERRFLVDLVIDPVSDLGRARDLALRVLAGMSFVLQRPEPVAWVEAT
                     SPETLVIRAGGWVSQDGTDFDLARGEAFRLLRRAMDAEGFGLPEPIHRIHVEGADPSP
                     AAQPVPRPAATRREKPPDLSPDATFEELLDRERGDGRNLLTPVGE"
     gene            complement(1601..>1911)
                     /locus_tag="EYO87_04080"
     CDS             complement(1601..>1911)
                     /locus_tag="EYO87_04080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011747555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="aminoacetone oxidase family FAD-binding enzyme"
                     /protein_id="HIC65172.1"
                     /translation="AAEAGLTDARLADQGNRVLDSVGARINRWQVRPVGTEGYRTAEV
                     TLGGVDTRDLDARSLQARRVPGLFFIGECVDVTGWLGGYNFQWAWASADAAARGMERG
                     "
BASE COUNT          290 a          666 c          625 g          330 t
ORIGIN      
        1 cgattatggc gcgcagcggc tacccggtga tcatggacgc cacccattcg gtgcagcagc
       61 cgggcggcca gggcggctcg tccggcggcc agcgggaatt cgcaccggtc atggcgcgcg
      121 ccgcggtgtc gctgggcgtg gccggcgtct tcatcgagac gcacgaggat cccgacaacg
      181 cgccctcgga cggtcccaac atgatcccgc ttcagcagat gcctgccctg atcgcctcgc
      241 tgatggcgtt cgaccgcctg gccaaggccg atccgctgac agcatgattc gggcgctgct
      301 gctgtcgatt cttcttgtcc tgccgtttgc cgcggtttcg caggcgcggg aggatggcgg
      361 cgtgatcacc gcgccttcgg ggacgattcc ggtcggcgac aacgcggcgt cagacgcagc
      421 gatccggacc cggatcgaca gcatcctgtc gcaggtcagc gccttcgaca aggtgcgcgc
      481 gagggtcgat gcgggcatcg ttcggctgac cggcgaggtg accgagcagg tgcagatcga
      541 tcgactggat gcactgatgg cgcgcgtgga cggggtcgtg gcgattcagg acgacgtgat
      601 cctgaccacc gatatcgggt tgcggctggg caccgtccgc gaccgtttcc tgcaacggct
      661 gaaccaggtg atcgccggcc tgcccttcgt tgccctggga ctggtcgtcg gtgcggtgat
      721 cctgctggtc ggcagctgga tctcgcgccg cgaacgaacc ctggcgcggg tcgcgccgaa
      781 ccccttcatc gccggttttc tggcccaggt catccgcctg atcgcctgga tcgtggcgct
      841 ggtggtggca ctggatctga tgggcgcgac cgcacttctg ggcacgctgc tgggcgcggc
      901 agggattttc ggcctgtcgc tcagcttcgc ggcccgcgac acgatcgagg gccttgtcgc
      961 aaccatcctg ctgtcgctgc gccagccctt cggtcccaac gatctgatcg aggtaaacga
     1021 ccagcgcggc cgcgtcatcc gcatgaccag ccgaggcacc acgctgctga cgctggatgg
     1081 caatcatatc cgaatcccga accagatcat ctacaaggca gtgctgacca actatacccg
     1141 caaccccgag cgtcgcttcc tcgtcgatct cgtgatcgac ccggtctcgg atctcggccg
     1201 cgcccgcgat ctggccctga gggtgctggc gggaatgagc ttcgtgctgc aacgccccga
     1261 acccgtcgcc tgggtcgagg cgaccagccc cgaaaccctc gtcatccggg ctggcggctg
     1321 ggtctctcag gacggaaccg atttcgatct ggcccgcggc gaggcctttc ggctgctgcg
     1381 ccgggccatg gacgccgagg ggttcggtct gcccgagccg attcatcgca tccatgtcga
     1441 gggggccgat ccgtcccctg ccgcccagcc ggtgcccagg cccgcggcca cgcgtcgtga
     1501 aaagcctccc gatctcagcc ccgacgcgac tttcgaggaa cttctggacc gcgaaagggg
     1561 tgatggccgc aatctgctga cgccggtcgg cgagtgaaga tcaaccccgt tccatgcccc
     1621 gggctgccgc atcggccgac gcccaggccc attggaaatt gtatccgccc agccagcccg
     1681 tcacatcgac gcattcgccg atgaagaaca atcccggcac ccgccgcgcc tgcaggctgc
     1741 gggcatccag gtcgcgggta tcgacgccgc ccagcgtgac ttcggcagtc cgatagcctt
     1801 cggtcccgac cggccggacc tgccagcggt tgatgcgcgc gccaaccgaa tccagcacgc
     1861 gattgccctg atcggccagc ctggcatccg tcagcccggc ttcggccgcc a
//
LOCUS       DTVW01000305            2968 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1389898, whole
            genome shotgun sequence.
ACCESSION   DTVW01000305 DTVW01000000
VERSION     DTVW01000305.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2968)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2968)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2968
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1389898"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..123)
                     /locus_tag="EYO87_04085"
     CDS             complement(<1..123)
                     /locus_tag="EYO87_04085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIC65173.1"
                     /translation="MRIELRGKSFAGRAVLGPIRLTIGRGRRVAVLGPSGIGKST"
     gene            complement(113..826)
                     /locus_tag="EYO87_04090"
     CDS             complement(113..826)
                     /locus_tag="EYO87_04090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HIC65174.1"
                     /translation="MLALWFVLALLSDNPRAVPGPGAVWSELVAIAASGELWFHAGMT
                     LFRVLASFVLAMAVGLALGLWMGRSRTADHWLNPGLVIALNLPALVVIVLAYIWIGLN
                     EVAAIVAVALNKIPVVTVMLREGARALRPDLDDMAQAFRMTAPARLRHVVLPQLAPHV
                     AAAARAGISLIWKIVLVVELLGRSNGVGFKIYLLFSSFDVAGVLAWALTFVAVMLAID
                     LAVLRPWEARANRWRRDAD"
     gene            complement(888..1865)
                     /locus_tag="EYO87_04095"
     CDS             complement(888..1865)
                     /locus_tag="EYO87_04095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009466028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HIC65175.1"
                     /translation="MMDIIRRQIARAALALVLTVAPAFAAVPVITIGALENGTVNWEL
                     QTIIGRGLDRKNGFSLKVLPLAGNPATQIAMQGGQVDSIVSDWLWVARQRAAGADFTF
                     LPYSTAVGGLVVPKDSPARTPGDLEGQKIGIAGGPVDKSWLILRAWNRQRNGVDLADA
                     TRQVFGAPPVIRNAAETGQVAGAVNFWHYLARMKAAGMREIISVSQAATDLGLDPATP
                     LLGYVLREDWIAAHPDLARGFARASRQAKDLLARDDAAWEDLRPIMNADSEAEFRALR
                     DGWRAGIPPDRPVDAANAQKMFSVMADLGGEDLTGGLTRLPEGLFWSGD"
     gene            2043..2750
                     /locus_tag="EYO87_04100"
     CDS             2043..2750
                     /locus_tag="EYO87_04100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HIC65176.1"
                     /translation="MTAAAMQARQSPSPRPSADQVREILIVDDHPLMCDALALTLKIS
                     FGLKNVRTARSLAAAMEQIKAQGAPDAVILDLNLPDARGSEGIVTLRRQLPDVPITMI
                     SADLEHAMIAAAMAAGAQGYISKSLSREALVDSLRRMWGGEHVTPDSYHPGEPDAEDT
                     ARAELARRFSTLTPQQMKILRLICQGKANKEISYELSIAEATVKTHITAIMSKINARR
                     RTQAVLLANSVRLFEAG"
     gene            2750..>2968
                     /locus_tag="EYO87_04105"
     CDS             2750..>2968
                     /locus_tag="EYO87_04105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65177.1"
                     /translation="MDTGPASKEGVAGPVAVQAGRGAANPASILLDGLRGARPALVLV
                     FGAKGDELAPLGDALKAGLPGDCIIAGCS"
BASE COUNT          518 a         1060 c          979 g          411 t
ORIGIN      
        1 cgtcgatttg ccgatccccg acggccccag gacggcgacc cgccggccgc gcccgatggt
       61 cagccggatc ggccccagca ccgcgcgccc ggcaaaggat ttgccgcgca gctcaatccg
      121 catcgcgcct ccagcggttt gcccgcgcct cccaggggcg cagcacggcc aggtcgatcg
      181 ccagcatgac cgcgacgaag gtcagcgccc aggccagcac gccggccacg tcgaagctgg
      241 aaaacagcag gtagatcttg aagccgaccc cgttcgagcg gcccagaagc tcgaccacca
      301 ggacgatctt ccagatcagc gaaattcccg cccgcgccgc cgccgcgaca tgcggcgcca
      361 gctgcggcag cacgacatgg cgcaaccggg ccggcgccgt catgcgaaag gcttgggcca
      421 tgtcgtccag atcgggccgc agggcgcgcg cgccctcgcg cagcatcacg gtcacgaccg
      481 ggatcttgtt cagcgccacg gcgacgatgg ccgcgacctc gttcaggccg atccagatat
      541 aggccagcac gatcaccacc agcgcaggca ggttcagcgc gatcaccagg cccggattca
      601 gccaatggtc ggcggtgcgc gaccggccca tccacagacc caaggccagc cccaccgcca
      661 tcgccagcac gaagctggcc agcacccgga acagcgtcat tccggcatga aaccacagct
      721 cgcccgacgc ggcgatcgcc accagttcgg accagaccgc gcccggcccc ggcacggcgc
      781 gcggattgtc cgacagaagg gccagcacga accacagcgc cagcatcgcc gtcagcgaca
      841 aaagcccggg caccgtgccg ggggcttgcc atggatatcg gggccgccta gtcaccggac
      901 cagaacagcc cctcgggcag ccgcgtcaag ccgccggtca gatcctcgcc gcccagatcg
      961 gccatgaccg aaaacatctt ctgcgcattc gccgcatcga ccggccggtc gggcgggatc
     1021 cccgcgcgcc agccgtcgcg cagggcccgg aactcggcct cggaatcggc attcatgatc
     1081 gggcgcagat cctcccaggc ggcatcgtcg cgcgccagca ggtccttggc ctgccgcgag
     1141 gcccgcgcga agccgcgcgc cagatcggga tgcgccgcga tccagtcctc gcgcaggaca
     1201 tagcccagaa gcggggtggc ggggtccagc cccagatcgg tcgcggcctg gctgacgctg
     1261 atgatctcgc gcatccccgc cgccttcatc cgggcgagat agtgccagaa attgaccgcg
     1321 ccagcgacct gacccgtttc ggcggcgttg cggatcaccg gcggggcgcc gaagacctgt
     1381 cgcgtcgcat cggccagatc gacgccgttc cgctgccggt tccaggcccg caggatcagc
     1441 cagctcttgt ccaccgggcc acccgcgatg ccgatcttct gcccctccag atcgcccggc
     1501 gtccgcgccg gactgtcctt cggcacgacc agcccgccca cggcggtcga atagggcagg
     1561 aaggtgaaat cggcgccggc cgcgcgctgc cgggccaccc acagccagtc cgagacgatg
     1621 ctgtccacct ggccgccctg catggcgatc tgcgtcgcgg gattgccggc cagcggcaga
     1681 accttcagcg aaaagccgtt cttgcggtcc agaccccggc cgatgatggt ctgcaattcc
     1741 cagttgaccg tgccgttttc cagcgcgccg atggtgatga ccggcacggc cgcgaaggcg
     1801 ggcgcgaccg tcagcacaag cgccagggcc gcgcgggcga tctgcctgcg gatgatgtcc
     1861 atcatctcga tccttcccgg ttgcggtcag ggtgtcatgg cccgggcggg ctcgcaaggc
     1921 gggcgatgct agaccttggt cgcagatcag ggttgcttta ccacgccgca gttctacaat
     1981 cgcggcatat tgttgcgact tcgggagggc cgcgacaagg gggatctcgg ggaggaaatg
     2041 tgatgaccgc cgcagccatg caggcgcgac aatcgccgtc gccacgacca agcgcggatc
     2101 aggtgcgcga aatcctgatc gtggacgatc atccgctgat gtgcgacgcg ctggcgctga
     2161 cgctgaagat cagctttggc ctgaaaaacg tgcgcaccgc gcgcagcctt gccgccgcca
     2221 tggaacagat caaggcgcag ggtgcgcccg atgccgtgat cctggatctg aacctgccgg
     2281 atgcgcgcgg ttcggaaggc atcgtcaccc tgcgccggca gcttcccgac gtgccgatca
     2341 cgatgatctc ggccgatctg gaacatgcca tgatcgcggc cgcgatggcc gcgggggcac
     2401 agggctatat cagcaagtcg ctgagccgcg aggcgctggt ggacagcctg cgccgcatgt
     2461 ggggcggcga acacgtgacc cccgacagct atcatcccgg cgaaccggat gccgaggaca
     2521 cggccagggc cgaactggcc cgccgctttt ccacgctgac accgcagcag atgaagatcc
     2581 tgcggttgat ctgccagggc aaggcgaaca aggaaatcag ctacgaattg tcgatcgccg
     2641 aggcgaccgt gaagacccac atcacggcga tcatgtccaa gatcaacgcg cgccgccgca
     2701 cccaggcggt gcttctggcg aattcggtca ggctgttcga ggccggctga tggataccgg
     2761 cccggcttcg aaggagggcg tcgccgggcc ggtggccgtg caggccggcc gcggggcggc
     2821 caacccggcc tcgatcctgc tggacggcct gcgcggagcc cggcccgccc tggttctggt
     2881 cttcggcgcg aagggggacg agcttgcacc tctgggcgat gcgctgaagg ccggcctgcc
     2941 cggcgactgc atcatcgcgg gctgttcc
//
LOCUS       DTVW01000306            2884 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1392180, whole
            genome shotgun sequence.
ACCESSION   DTVW01000306 DTVW01000000
VERSION     DTVW01000306.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2884)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2884)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2884
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1392180"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..937)
                     /locus_tag="EYO87_04110"
     CDS             complement(<1..937)
                     /locus_tag="EYO87_04110"
                     /EC_number="1.1.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998817.1"
                     /note="catalyzes the formation of D-ribulose 5-phosphate
                     from 6-phospho-D-gluconate; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent phosphogluconate dehydrogenase"
                     /protein_id="HIC65178.1"
                     /translation="MTDKAQIGLIGLGTMGAALALNIAEKGFPIAVWNRTTSVTHRFK
                     AEAAALADRVIATETLAQLVAAIQPPRAIILMVPAGQPVDDQLEALSPLLDAEDLVID
                     AGNADFRDTDRRAAAGLPFHFLGMGVSGGEEGARHGPSIMGGGTQADWDRVAPILTAI
                     SAKAEDGTPCAARMGDAGAGHFVKMVHNGIEYADMQMIAEIYGIMRDGMGMDAAAISG
                     IFAGWDKGVLQSYLVEISARVTAAADSHTCKPVIDMILDRAGQKGTGRWTAIEAQHLA
                     APIPVIEAAVMARNVSARLEERRSWQDRFGAAPQPC"
     gene            849..1520
                     /locus_tag="EYO87_04115"
     CDS             849..1520
                     /locus_tag="EYO87_04115"
                     /inference="COORDINATES: protein motif:HMM:PF13463.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HIC65179.1"
                     /translation="MGKPFSAMFSARAAPMVPKPINPICALSVMAKASDSDGSASHNP
                     RGGGSHATALLQNVHFFLFFIRTLIICARMKTQSESFEAKKRCGLLLQEAAALLRREF
                     EHAAGPEGLTLTQWRVMGQLAQHPDGLRQAALGKAINASAMTVSDVAERLEGAGFIRR
                     EPDPGDSRAKLVRVTQQGAVLLDRMRETASGILGRALAGLAEDDRTMLADLLGQVIAN
                     LQDRP"
     gene            1517..2644
                     /locus_tag="EYO87_04120"
     CDS             1517..2644
                     /locus_tag="EYO87_04120"
                     /inference="COORDINATES: protein motif:HMM:PF13533.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HIC65180.1"
                     /translation="MTERANGMNAETGKMKDAEAVPASAAVAAQAAPVPKRRKGRRRM
                     LMAAVPLALVLAGGGYWLTGGRYVTTDNAYVHQPMIPVSADVSGRITEVDVTENQQIA
                     AGAPIFRLDPEPYRIAVAQAEAALASARLAVEQQRAAYATAEAQLEAARSILEVQNRE
                     QERRQALVKRGVNSAASLDDATVATRNASNDVAIARRQRDAAAAALGGDPTAQTDDLP
                     AVRAAIARLDAARRDLAKTRIDAPVSGTVAQVGSLNVGQFVQAGSGIATLVDANDTWI
                     EANFKETQLQGIRTGQPVSVELDAYPDLELRGKVGSIGAATGSQFSLIPAQNATGNWV
                     KVVQRLPVRIQLDGAPAGVLRNGFSARVSIDTGKSRLDQLR"
     gene            2641..>2884
                     /locus_tag="EYO87_04125"
     CDS             2641..>2884
                     /locus_tag="EYO87_04125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012977658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HIC65181.1"
                     /translation="MSAAPVLSAPNLRVAAPGWLTAAIIIATVMQVLDTTIANVALPH
                     MAASLGATQEESTWVLTSYIVAAAIATPLTGWAADRF"
BASE COUNT          463 a          945 c         1011 g          465 t
ORIGIN      
        1 ggcagggctg gggcgcggcg ccgaatcggt cctgccagct gcgccgttcc tccagccggg
       61 ccgaaacatt gcgcgccatc accgccgcct cgatcaccgg aatcggtgcc gccagatgct
      121 gggcttcgat ggcggtccag cgaccggtgc ccttctggcc ggcgcggtcc aggatcatgt
      181 cgatgaccgg cttgcaggta tggctgtctg cggccgccgt gaccctggcg gaaatctcga
      241 cgaggtagga ttgcaggacg cccttgtccc agcccgcgaa gatccccgag atcgcggcgg
      301 catccattcc catcccgtcg cgcatgatgc catagatctc ggcgatcatc tgcatgtcgg
      361 catattcgat gccgttatgg accatcttga cgaaatggcc cgccccggca tcgcccatcc
      421 gcgcggcgca gggggtgccg tcttccgcct tggcgctgat ggcggtcagg atcggggcca
      481 cgcggtccca gtcggcctgg gtgccaccgc ccatgatcga ggggccgtgc cgggcgcctt
      541 cctcgccgcc cgatacgccc atgccgagaa aatggaaggg caggccggcg gcagcgcggc
      601 ggtcggtgtc gcggaaatcg gcattgccgg cgtcgatgac cagatcctcg gcgtccagca
      661 aagggctcag cgcctcaagc tgatcgtcca ccggctgacc ggccggcacc atcaggatga
      721 tggcccgcgg cggctggatg gcggccacca gctgggccag ggtttcggtc gcaatcaccc
      781 ggtccgccaa cgcggccgct tcggccttga aacggtgcgt gacgctggtc gtgcggttcc
      841 agacggcgat gggaaagccc ttctcggcga tgttcagcgc cagggccgcg cccatggtgc
      901 ccaagccgat caatccgatt tgtgccttgt ccgtcatggc gaaagcctcc gattccgatg
      961 gttccgcaag ccataatccg cgcggcggcg gaagtcacgc gacagcgctt ttgcagaacg
     1021 tgcatttttt ccttttcttt atacgaacac ttattatatg tgcccgtatg aaaacgcaaa
     1081 gcgagtcgtt cgaggccaag aagcgctgcg gtctgctgtt gcaggaggcc gcagccctgc
     1141 tgcgccgcga attcgagcat gcggccggcc ccgaggggct gacgctgacc cagtggcggg
     1201 tcatgggcca gcttgcgcag cacccggacg ggctgcggca ggcggcgctt ggcaaggcga
     1261 tcaatgcctc ggcgatgacg gtcagcgatg tggccgaacg gctggagggc gcgggcttca
     1321 tccgtcgcga acccgatccc ggcgacagcc gcgccaagct tgtgcgcgtg acgcagcagg
     1381 gcgcggtttt gctggaccgg atgcgcgaga cggcttcggg catcctgggg cgggcgctgg
     1441 ccgggctggc cgaggatgac aggacaatgc tggccgatct gcttgggcag gtcatcgcga
     1501 accttcagga tcggccgtga cggaaagggc gaacgggatg aatgccgaga cgggaaagat
     1561 gaaggatgcc gaggccgtgc ccgcaagtgc ggcggtcgcg gcgcaggccg cgcctgtgcc
     1621 gaaaaggcgc aaggggcggc ggcggatgct gatggctgcg gtgcctctgg cgctggtgct
     1681 ggccgggggc ggttactggc tgacgggcgg gcgctacgtg acgaccgaca atgcctatgt
     1741 gcatcagccg atgattccgg tctcggccga tgtcagcggt cgcatcaccg aggttgatgt
     1801 gaccgaaaac cagcagatcg cggccggcgc gccgatcttc cggctggatc ccgaacctta
     1861 ccggatcgcg gtggcacagg ccgaggcggc gctggcgtcg gcgcggctgg ccgtcgaaca
     1921 gcagcgcgcc gcctatgcca cggccgaggc gcagctcgag gcggcccgga gtatcctcga
     1981 ggtgcagaat cgtgaacagg aacgccggca ggcgctggtc aagcggggcg tcaattccgc
     2041 cgcttcgctg gatgacgcga ccgtggccac gcgcaatgcc agcaacgatg tcgccatcgc
     2101 ccggcgtcag cgcgatgcgg cggcggcggc cctgggcggc gatccgacgg cacagaccga
     2161 cgatctgccc gccgttcgcg ccgccatcgc gcgactggac gcggcccgtc gcgacctggc
     2221 caagacccgg atcgacgcgc cggtttccgg caccgtggcc caggtcggca gcctgaatgt
     2281 cggccagttc gtgcaggccg gatcggggat cgccaccctg gtcgatgcca acgacacctg
     2341 gatcgaggcg aatttcaagg agacccagct tcaggggatc cggaccggtc agcccgtctc
     2401 ggtcgaactc gatgcctatc ccgatctgga attgcgcggc aaggtgggca gcatcggcgc
     2461 cgcgaccgga tcgcagttct cgctgatccc ggcgcagaat gcgaccggca actgggtcaa
     2521 ggtggttcag cgtctgcccg tgcgcatcca gcttgacggc gcgcctgcgg gcgttctgcg
     2581 caacggcttt tcggcccggg tctctatcga taccggcaag agccgcctgg accagctgag
     2641 atgagcgccg cgcccgttct gtccgcaccc aacctgcgcg tggcggcgcc gggctggctg
     2701 acggccgcga tcatcatcgc gaccgtgatg caggtgctgg acaccaccat cgccaatgtc
     2761 gcgctgccgc acatggcggc cagtctgggc gccacgcagg aggaaagcac ctgggtgctg
     2821 acctcttata tcgtggccgc tgccatcgcc acgccgctga ccggctgggc cgccgaccgg
     2881 ttca
//
LOCUS       DTVW01000307            1721 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1392814, whole
            genome shotgun sequence.
ACCESSION   DTVW01000307 DTVW01000000
VERSION     DTVW01000307.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1721)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1721)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1721
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1392814"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..202)
                     /locus_tag="EYO87_04130"
     CDS             complement(<1..202)
                     /locus_tag="EYO87_04130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease"
                     /protein_id="HIC65182.1"
                     /translation="MAILVLGAGLQAWNSRGGPVPPSRPVTLRIATMNIHYIALAAND
                     DDRWSAAGWQRRRGAAADVLGRL"
     gene            351..1079
                     /locus_tag="EYO87_04135"
     CDS             351..1079
                     /locus_tag="EYO87_04135"
                     /inference="COORDINATES: protein motif:HMM:PF11249.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3047 domain-containing protein"
                     /protein_id="HIC65183.1"
                     /translation="MGQDYPWPARPRKTGETVDRRSFLIATAAAASATTAALPAAAQS
                     PRMVPVAFDARWRALTFPGRTPTRYKLGGTTLTIEADASSSLIYRPAPDAARGATTAR
                     WSWSVSASVPPTDLSRKGGDDRNLSVYFVFMDPQAAARLSPDTSPRRLLANRSARALI
                     YVWGGQRAPGSLIPSPYMRGRGVTVVLRGPGTGRAQARVDLAADHASAFRTAPGVLVG
                     LAVSADSDDTDTALRASLSNLALG"
     gene            complement(1129..1707)
                     /locus_tag="EYO87_04140"
     CDS             complement(1129..1707)
                     /locus_tag="EYO87_04140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010153129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HIC65184.1"
                     /translation="MRPLAQALSERGIGADAISLAGFAVGLLAIPALAAGWFAAAAVL
                     IVVNRTMDGLDGAVARIAGPTDRGAFLDIALDFVFYALVPLGFALNDPAANALPAAAL
                     IAAFVGTGSSFLAFAAIAAKRGREASAFPQKGIYYLGGLTEGFETIVIFLLMCLLPGR
                     FPILACIFAAACALTTVLRWRMGWKTFGRGEP"
BASE COUNT          289 a          617 c          580 g          235 t
ORIGIN      
        1 cgaggcggcc cagcacgtcg gccgccgcgc cgcgccgcct ctgccagccc gctgccgacc
       61 agcgatcgtc gtcattcgcc gccaaggcga tgtaatggat gttcatcgtc gcgatacgca
      121 gcgtgacggg acgcgacggc ggaaccgggc caccgcgcga attccacgct tgcaatccgg
      181 cgcccagaac caggatcgcc atcacggcac ccgcgagaca ccgaataatc catcgcgaag
      241 acatcgtgcc aaggtgacgg gaatcgcgcc gctgtcaatt cacgctgtct tgcgacgccc
      301 agtgccgcgc gctgaagcaa ggcttgtaac atttcggccc gtcccgtcga atgggacagg
      361 actacccctg gcctgcaagg ccgcgaaaga caggagagac cgtggacaga cgcagctttc
      421 tgatcgcgac cgccgcggcc gcatcggcca cgaccgccgc cctgcctgcc gccgcgcaat
      481 caccgcggat ggtgccggtg gccttcgatg cgcgctggcg ggcgctgacc tttccgggcc
      541 ggacgccgac gcgctataag ctgggcggaa cgacattgac gatcgaggcg gatgcaagct
      601 cgtcgctgat ctaccggccg gcgccggacg ccgcgcgcgg cgccacgacc gcccgctggt
      661 cctggtcggt ctcggccagc gttccgccga ccgatctgtc gcgcaagggg ggcgacgacc
      721 gcaatctgtc tgtctatttc gtcttcatgg atccgcaggc ggcggcgcgg ctgtcacccg
      781 acacctcgcc ccgccggctg ctggccaacc gttcggcgcg ggcgctgatc tatgtctggg
      841 ggggccagcg ggcgccgggc agcctgattc ccagccccta catgcgcggg cgcggggtga
      901 cggtggtgct gcgcgggccg gggacgggtc gggcccaggc gcgtgtggac ctggccgccg
      961 atcatgcaag cgccttccgc accgcgccgg gcgttctggt ggggctggca gtctcggccg
     1021 acagcgacga taccgacaca gcgctgcgcg ccagcctgtc gaatctggct ttgggataga
     1081 tcggccgggc gccgctcggg cacgcccgtc cctgcagacc gtcgcgcgtc agggctctcc
     1141 tcgaccgaag gtcttccatc ccatgcgcca gcgcagcacc gtggtcaggg cgcaggccgc
     1201 cgcgaagatg caggccagga tgggaaaccg gcccggcagc aggcacatga gcaggaagat
     1261 gacgatcgtt tcgaagcctt cggtcagccc gcccagataa tagatcccct tctgcggaaa
     1321 ggccgatgct tcccggcccc gtttggcggc aatggcggca aaggccagaa acgacgaacc
     1381 cgtgcccacg aaggcggcaa tcagtgccgc ggccggcagc gcgttcgctg ccggatcgtt
     1441 cagcgcgaag cccagcggaa ccagggcgta aaagacgaaa tccagcgcga tgtccaggaa
     1501 cgccccgcga tcggtcggac ccgcgatccg cgccaccgcg ccgtccagcc cgtccatcgt
     1561 gcgattgacg acgatcagca cggccgccgc ggcgaaccat cccgcagcca gggccggaat
     1621 ggccagcagc cccaccgcaa acccggccag gctgatcgcg tcggcgccga tgccacgctc
     1681 ggacagggcc tgtgccagcg gacgcatcgc cgcgcgttgc a
//
LOCUS       DTVW01000308            1123 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1392854, whole
            genome shotgun sequence.
ACCESSION   DTVW01000308 DTVW01000000
VERSION     DTVW01000308.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1123)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1123)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1123
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1392854"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..484)
                     /locus_tag="EYO87_04145"
     CDS             complement(<1..484)
                     /locus_tag="EYO87_04145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012111854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase"
                     /protein_id="HIC65185.1"
                     /translation="MTEKVRSTAKDWSSAPLDREIVITRVVDADRATVCAAWTDPEQI
                     VKWFGPEGFRCKTHEIDIRTGGVWRFDMTSPDGTNFSNGMDFVRVEAPDLIEAVHGKD
                     EANDPDRFRLLVTFDEQENGKTVVTLRQIHPTPERRNTVIAFGAVELGGQTLSKLAAQ
                     V"
     gene            complement(477..821)
                     /locus_tag="EYO87_04150"
     CDS             complement(477..821)
                     /locus_tag="EYO87_04150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012111855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HIC65186.1"
                     /translation="MANFDTVIETTFSALSDPTRCAVVKALSQGPAAVSKLAQPFEMA
                     LPSFTQHLAVLEDAGLISSERQGRTRICSLDPDALRRAEDWLATYRRQAEERLDRLEA
                     HPDQQKKDNPDD"
BASE COUNT          232 a          314 c          319 g          258 t
ORIGIN      
        1 cgacttgtgc agccagtttc gagagggtct gaccaccaag ttcgacggcg ccaaaggcaa
       61 tgacggtgtt ccggcgttcc ggcgtcggat ggatctgtcg cagggtaacg accgtttttc
      121 cgttttcctg ctcatcaaag gttacaagca gacggaaccg atccggatcg ttggcttcgt
      181 ccttgccatg gaccgcctcg atcaggtccg gagcttcgac gcggacgaaa tccatcccgt
      241 tcgagaagtt cgtgccatca ggtgaggtca tgtcgaaccg ccacacgccg cccgtccgga
      301 tgtcgatttc atgagtcttg catctgaaac cctccggccc gaaccatttc acgatctgtt
      361 cgggatccgt ccacgccgca cagacagttg cgcgatccgc gtctaccacg cgggtgatga
      421 cgatttcacg atcaagcggg gccgatgacc aatcctttgc tgtgcttctg actttttcag
      481 tcatcgggat tatccttctt ttgctggtcc ggatgtgcct caagacgatc gaggcgttct
      541 tctgcctgcc ggcggtatgt tgccagccaa tcttcagccc tgcgaagtgc atctggatca
      601 agagaacaga tgcgcgttcg tccctgccgt tccgatgaga taagcccagc gtcctccaga
      661 actgccaagt gctgtgtaaa ggatggcaag gccatttcga agggctgtgc cagcttcgag
      721 accgccgccg gtccttggct gagggctttc accactgcgc accgcgtcgg gtcggaaagt
      781 gcgctgaatg ttgtttcgat cacggtatca aagttggcca tcagccagaa ctaggcgggc
      841 ggaacatatt aggtcaacac ctgactatca cggcacgatt ttcgggaagg ggtcaatcgg
      901 cgtcagtgtt gtgcctgaaa acaggggctc ggacttgccg ttcgccgcaa ggatggaaaa
      961 aaagatgcgc ctctgttcag tcagataccg atgatcccgg actagacgcg gctgccttgt
     1021 tcatcgttgt gacaaaaagt cgagacgatc tggcaggtat cattttcggg aaaacctggt
     1081 ggagccaagg ggagtcgaac ccctgacctc ttgaatgcca ttc
//
LOCUS       DTVW01000309            2397 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1394371, whole
            genome shotgun sequence.
ACCESSION   DTVW01000309 DTVW01000000
VERSION     DTVW01000309.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2397)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2397)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2397
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1394371"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..355)
                     /locus_tag="EYO87_04155"
     CDS             complement(<1..355)
                     /locus_tag="EYO87_04155"
                     /inference="COORDINATES: protein motif:HMM:PF01212.19"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low specificity L-threonine aldolase"
                     /protein_id="HIC65187.1"
                     /translation="MNFSSDNAWGAHPAVMAGLVACNDGAMMAYGADDVTRRAEAAIR
                     AALDAPQAVVRFVATGTAANALVCAQLCPAGGRIYCHQDAHVETSECGAPEFFSHGGK
                     LIGLPGDAGRVAPAPL"
     gene            complement(352..792)
                     /locus_tag="EYO87_04160"
     CDS             complement(352..792)
                     /locus_tag="EYO87_04160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010396202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcgN family cysteine cluster protein"
                     /protein_id="HIC65188.1"
                     /translation="MRDRFWDMPLERLTPAEWEALCDGCGKCCLNKIEYEDTEELAFT
                     RVACKLLDGQDCRCMSYADRHRYVPECVVLTPKKLKDIAWWLPATCAYRLRAEGKPLY
                     DWHHLISGDPESVHRAGVSVRGWTISETELSEDDWEEHIIEDPS"
     gene            complement(792..1721)
                     /locus_tag="EYO87_04165"
     CDS             complement(792..1721)
                     /locus_tag="EYO87_04165"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011749898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional riboflavin kinase/FAD synthetase"
                     /protein_id="HIC65189.1"
                     /translation="MQIHHDWVGLPANARGATVAMGNFDGIHLGHRAVIDAAREALDA
                     PLGVITFEPHPREFFAPDAPPFRLMNSESRANRLARLGVEQLYELPFGPVLAGLSPEA
                     FAREVLVDGLGVGHVTVGADFCFGKKRAGNAATLAELGRHMGFGVTAVPLVGVKGRDY
                     SSTAIRTALAEGRVREAETMLGHWHRIEGEVVHGDKRGHDFGWPTANMQVENLHLPRL
                     GVYAVLVDVLTGPERLSCQGVASLGVRPMFGRNAPNLEVHLFDFDGDLYGQHLSVALV
                     DFLRDEARFDSVDALIDQIARDAEDARAILAGA"
     gene            complement(1754..2197)
                     /locus_tag="EYO87_04170"
     CDS             complement(1754..2197)
                     /locus_tag="EYO87_04170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase"
                     /protein_id="HIC65190.1"
                     /translation="MLDNLSRGTIVIEDLEIGMTRHLQKRITDRDIELFAEVSTDRNP
                     VHLDDTYAQDTIFEGRIAHGMLTAGLVSAVIGEQLPGHGTVYLGQTLKFMAPVRPGDV
                     VRAEVTVDAIDHAKRRVTLATRCLVGDTLVLKGEAVVLAPSRKFD"
BASE COUNT          448 a          813 c          734 g          402 t
ORIGIN      
        1 ccagcggcgc gggcgcgacc cggccggcgt cacccggcag cccgatcagc ttgccgccat
       61 ggctgaagaa ttccggcgct ccgcattcgc tggtctcgac atgggcatcc tgatgacaat
      121 aaatgcgccc acccgcaggg caaagctggg cgcagaccag cgcattggcg gccgtcccgg
      181 tcgccacgaa gcgcaccacc gcctgcgggg catccagtgc cgcacggatc gcggcctcgg
      241 cccgcctcgt cacatcatcc gcgccatagg ccatcatcgc accgtcattg caggcgacca
      301 gccccgccat gaccgcggga tgcgcgcccc aggcattgtc ggacgaaaag ttcacgacgg
      361 atcctcgatg atatgttcct cccagtcatc ctcggacaat tcagtctcgc tgatggtcca
      421 gccgcgcacg ctgacgcccg cgcgatgcac cgattcagga tcgcccgaga tcaggtgatg
      481 ccaatcgtag agcggcttgc cctcggcgcg caggcgatag gcgcaggtcg ccggcagcca
      541 ccaggcgatg tccttcagct tcttcggcgt caggaccacg cattccggca catagcgatg
      601 gcggtcggca taggacatgc agcggcagtc ctgaccgtcc agcagcttgc aggcgacgcg
      661 cgtgaaggcc agttcctcgg tatcctcgta ttcgatcttg ttgaggcagc atttcccgca
      721 gccatcgcag agcgcctccc attcggcggg ggtcaggcgc tccagcggca tgtcccagaa
      781 ccgatcgcgc atcatgcgcc cgcaaggatc gcgcgggcat cttcggcgtc ccgcgcgatc
      841 tggtcgatca acgcatccac actgtcgaac cttgcctcgt cgcgcaggaa atcgaccagc
      901 gcgacggaca aatgctggcc gtagagatcg ccgtcgaaat cgaacagatg cacttccaga
      961 ttgggggcgt tgcggccgaa catcgggcgc acgcccaggc ttgcgacgcc ctggcaggac
     1021 agccgctcgg ggccggtcag cacatcgacc agcacggcat agacgccaag acgcggcagg
     1081 tgcagattct cgacctgcat attcgccgtg ggccagccga aatcatgccc gcgcttgtcg
     1141 ccgtgaacca cctcgccctc gatccgatgc caatggccca gcatcgtctc ggcctcgcgg
     1201 acccggccct cggccagagc ggtgcggatc gcggtcgagc tgtagtcgcg tcccttcacg
     1261 cccaccagcg gcacggcggt gacgccgaaa cccatgtgac ggcccagttc tgccagggtt
     1321 gcggcattgc ccgcgcgttt cttgccaaag cagaaatcgg cgcccacggt gacatggccg
     1381 acgccaagcc cgtccaccag aacctcgcgc gcgaaagcct cgggtgacag gccggccaga
     1441 accgggccga agggcagttc gtaaagctgc tcgaccccca gccgggccag ccgattggcg
     1501 cgggattccg aattcatcag ccggaagggc ggcgcgtcgg gggcgaagaa ttcgcgggga
     1561 tgcggttcga aggtgatgac gcccaggggt gcgtcaagtg cctcgcgggc cgcgtcgatc
     1621 accgcacgat ggcccagatg gatgccgtcg aaattgccca tcgcaacggt cgcgccgcgc
     1681 gcattggctg gcaatccgac ccaatcgtga tggatttgca aacgcgcccc cttcgagggg
     1741 cgcaaccgcc ccttcagtcg aacttgcggc ttggggccag cacgaccgcc tcgcctttca
     1801 gcacgagcgt atcgcccacc agacatcggg ttgcaagcgt gacccgccgt ttcgcgtggt
     1861 cgatcgcatc gaccgtcacc tcggcccgga ccacgtcgcc gggcctgacc ggggccatga
     1921 atttaagcgt ctggcccagg tagacggtgc cgtgaccggg aagctgttcg ccgatcacgg
     1981 ccgagaccag tccggccgtc agcatcccat gcgcgatccg cccctcgaag atcgtgtcct
     2041 gcgcataggt atcgtccaga tgcaccggat tgcggtctgt cgaaacctcg gcgaacaact
     2101 cgatatcgcg atcggtgatc cgtttctgaa gatggcgggt catgccgatt tccagatcct
     2161 cgatgacgat cgtgccgcgg gaaagattgt ccagcatcgg ggtgtccatc tgatgtaagc
     2221 cagaatcctt catcgtcatg ctgcatagca gcaaaacaga cttcgcgcaa taaagtatca
     2281 caaataccgt ataaaaggat ggttttgttt ctcggccagc gcgtcaagct cctccgctat
     2341 cggcctttgc ccgcagtctg gcgggaaacg ctcagcgcag ccggccgatg ctgtagg
//
LOCUS       DTVW01000310            1852 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1396096, whole
            genome shotgun sequence.
ACCESSION   DTVW01000310 DTVW01000000
VERSION     DTVW01000310.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1852)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1852)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1852
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1396096"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(175..>1852)
                     /locus_tag="EYO87_04175"
     CDS             complement(175..>1852)
                     /locus_tag="EYO87_04175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014528152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="selenocysteine-specific translation factor"
                     /protein_id="HIC65191.1"
                     /translation="DARRVELRAQIRATLAPTGLANAAIVPVSSLTGEGIAPLRLLLI
                     EAEAATAPRRDDAPFRLAVDRSFTLAGVGTVVTGTVISGRVDIGDPVTISPRGLAARV
                     RGIHSQNRPAETGSAGQRCALNLSGEGIGKDAVARGDMILSPPLHAPTDRIDAWLDVM
                     ANEPKSIGNWFPARLHTHAAEAGARIVPLSEPIPPGASGPVQIVLDRPVAAAIGDRFI
                     LRDVSASRSLGGGVFLDLRPPARKRRAPARLALIEAARDRNDGAALAAMLAVAPVDLP
                     VFTRDRALSIPDAQNAIRTAGAVILGDLALSHDHLDGLRTQLQQALARFHEQNPDMAG
                     LGREKLRLTLMPRLPKPEFLSFLRDEAGAGRAVMDGAFLRLPGHEVRLSPEDEALWLR
                     IVPALTGDGRFRPPRVRDFATETGVEEREVRRVLKLTQKLGRTDQIAHDHFFARTVTA
                     EMVAIAVDVAAKTEDGWFGAPAFRDRMGNGRKVAIEILDFLDRLGVTLRRGDLRRINP
                     HRVDLFGTAEQRDGRESSPVGRPDFKSGWGSEPVPGGFDSHSLPPEKWRG"
BASE COUNT          285 a          640 c          655 g          272 t
ORIGIN      
        1 gggggggggg cgatggccgg ggggcggcct gcgcaacccg attccgcggc cggttgcatc
       61 acggatcgcg gcccataccg ccatgcgggc ggcctgccgg ggcgcaagga caacgcgcct
      121 tcggttccgg gcctgcggga ccgatccgtt cgagccggaa tccagagccg cgcgtcagcc
      181 ccgccacttt tctggcggaa gggaatggga gtcgaaccca cccgggacag gctcgctgcc
      241 ccaaccggat ttgaagtccg gccgccccac cggggacgat tcccttccat cgcgctgttc
      301 cgccgtgccg aacagatcca ccctgtgggg attgatgcga cgcaaatcgc cgcggcgcaa
      361 ggtgacccca aggcgatcca gaaaatccag gatctcgatg gcgaccttgc gtccgttacc
      421 catcctgtcg cggaaggcag gggcgccgaa ccagccgtct tcggtcttcg ccgcgacatc
      481 gaccgcgata gccaccattt cggcagtgac ggtgcgggcg aagaaatggt catgcgcgat
      541 ctggtcggtg cgccccagct tctgcgtcag cttcagcacc cgccgcacct cgcgttcctc
      601 cacacccgtc tcggtcgcga aatcgcggac gcgcggcggg cggaaacggc catcgcctgt
      661 cagggccggg acgatgcgca gccacagcgc ctcatcctcg ggcgacaggc gaacctcgtg
      721 accgggcagg cgcagaaagg caccgtccat gaccgcgcgc ccggccccgg cctcgtcgcg
      781 cagaaaggac aggaattcgg gcttgggcag gcgcggcatc agtgtcaggc gcagtttttc
      841 gcggcccagg cccgccatgt cggggttctg ttcgtgaaat cgggccagcg cctgttgcaa
      901 ctgcgtccgc agcccgtcca ggtgatcgtg cgacagggcc agatcgccca ggatgaccgc
      961 gcccgcggtt cggatcgcgt tctgcgcgtc cggaatcgag agggcccgat cccgcgtgaa
     1021 gaccggcaga tcgaccggcg cgacggccag catcgcggca agggcggcgc cgtcattccg
     1081 gtcgcgcgca gcctcgatca gcgccagcct tgccggtgcg cgccttttgc gggccggcgg
     1141 acgcaggtcc aggaagacac cgccgccaag cgaccggctg gccgaaacgt cgcgcaggat
     1201 gaagcggtcc ccgatcgcgg cggcgaccgg gcgatccagc acgatctgga ccgggccgct
     1261 ggcgccgggc ggaatcggtt ccgacaatgg cacgatccgc gcgccggcct cggccgcgtg
     1321 ggtgtgcagg cgggcgggaa accagtttcc gatggatttc ggttcgttcg ccatcacatc
     1381 cagccaggcg tcgatgcggt cggttggggc gtgaagcggt ggtgacagga tcatgtctcc
     1441 gcgagcgacg gcatctttcc cgatcccctc gcccgacagg ttcagtgcgc agcgttgtcc
     1501 ggccgatcct gtctcggcgg gccggttctg gctgtggatg ccacgcaccc gcgccgccag
     1561 gccccgcggg ctgatcgtga ccggatcgcc gatatcgacg cgcccgctga tgaccgtgcc
     1621 ggtgacgacg gtgccgacac ccgcaagggt gaagcttcga tccacggcca gccggaacgg
     1681 ggcgtcgtcc cgccgtggcg cggtggcggc ctcggcctcg atcagcagaa ggcgcagcgg
     1741 cgcaatcccc tcgccggtca gggacgagac cgggactatg gcggcgttgg ccagtccggt
     1801 cggcgccagc gtcgcgcgga tctgggcgcg gagttccacg cggcgtgcgt ca
//
LOCUS       DTVW01000311            5943 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1397131, whole
            genome shotgun sequence.
ACCESSION   DTVW01000311 DTVW01000000
VERSION     DTVW01000311.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 5943)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5943)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5943
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1397131"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..5820
                     /locus_tag="EYO87_04180"
     CDS             <1..5820
                     /locus_tag="EYO87_04180"
                     /inference="COORDINATES: protein
                     motif:HMM:PF06165.9,HMM:PF10091.7,HMM:PF17167.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein ndvB"
                     /protein_id="HIC65192.1"
                     /translation="EVVCLLYDRSLPSRERLAVSRRNLLEWTPSQLIGDRDDPRLAAE
                     YRRMIVSPLIGGGAILASAAVNPSALPVAVIFAALWIAAPWITFRASRSLETVDQLQI
                     SAEDKAELRRIARRIWRYFDEFVDQTTNHLPPDNYQELPAPKLAERTSPTNIGLYLMS
                     VMSAHDFGWIGLDTALKRIEATIATLERMQRFRGHFFNWYDTRTLSVLPAPYLSSVDS
                     GNLAGMLIALSSGLRGWAAHAPSVRVPATAGLRDTLDILRAELELLRDDRRALRDLHG
                     AMSEAIDGYARSVAHSLPGSLADPVAAGQLISRAATIRRLAGDLHAATPRGDAAEILA
                     WSTALVRDTADVLNPVTTRPEALDKFVLQTRLLAERARNLAFGMDFSLFVDREKSLMS
                     IGYRTDAQALDGSRYDLLASEARLTSFLAIAKGDLGKEHWSRLGRPFAMVGHRGALLS
                     WSGSMFEYLMPPLLLKERQGGILNLADKMAVAIQMEWGRSHGLPWGISESAFNARDRD
                     MNYQYYAFGVPNLALKRSGGDYVVAPYASILAAQIDPQAAIRNLAALRELGAEGRFGF
                     YDAVDFSPRRQREGANHSVVKNVMAHHHGMSMLAIGNAVLDGIHRERFHADPVVRASE
                     LLLQEKSPRDITPVTRATTAFGPGRDTLLSSGDTLTVVSDPGRAEREVALMSTGAFTM
                     FVSSTGAGRAMLGNIALNRWSADPTRDDGGIHLLMRDIQSGEWWSATHAPCSGADERS
                     TVIFSDHKAEFFKTANAIESRLEIIAATEGNADGRRLTLRNLSGRDRTIEVTSYGEIV
                     LDDPASDRAHPAFSKMFVETEIRDEGALIMARRRPRDPRGQSLYMAHLVTGPDGALTP
                     AAEAETDRRAFLGRGRSLADAAAMKSGATLSGRQGHTLDPIFAIRRHIRVPAGKSASI
                     TFWTLIADSAEDCARLATHFTRPGCFEHELRLAWTYSQVQLRHLGVSLDEAKLYRQFA
                     SLLIWPDLRLAATPQRRRDIGRQNELWPMGISGDVPILLLRIDNEADLPIIRNAMRMH
                     TFLQSRGVLHDLVILNERPTSYAQDLQHGIQTLVDAAVHAAGQSGPHHAHAVRRDQIS
                     QGSFDTLISAARIMLHTRNGKLFEQLARLRETPPAPARLRGCGERRRDDPRPRPASRS
                     QLEFWNGFGGFASDGREYVLRITHDRQTPHPWINVIARDDFGFHVSAEGASYTWAVNS
                     RDYRITPWTNDPVINAPGETILVHDPETGCVASPFLATSEPGDAVFEAAHGLGYSRFT
                     ADYGWVVVEAVMTLARDVPARLTRLRVTNRTRRHLRLRGVAYAQLVLGTDAAVAGPMV
                     RTGFDTGLAAAIGRNPYSADFADRITALACDREVDAHCGSRTAFLGREGAISYPAALE
                     SWPRPAAQGGGGAQDVEAAGDPCAAIRWPLSVAPGETAETTLILANGDAETLPRVLAA
                     ARSPGAFDAAMNAARDEWDSVLGTLQIDTPDDKLNLLVNTWLPYQALACRIRARTAFY
                     QASGAFGFRDQLQDTSALILQDPSLCRRQILNAAGRQFTSGDVQHWWLPRTGAGVRTT
                     ISDDVVWLGHVTALYIAATGDRAILDEPVEYLSGPELDQGEHDRFFVPDSSGLRSPLY
                     DHCARALDLAVARTGRNGLPLILGGDWNDGMNRVGEAGQGESVWLGWFLCATIDAFAP
                     LAEARGDAARAAAWSAHRQSVAAALDKAGWDGAWYRRGYFDDGTPLGSADSDECRIDS
                     IAQSWALISGAGREDRAQQGVAQALSHLFDREARIMRLFTPAFRDTPREPGYIKSYPP
                     GVRENGGQYTHAAAWMVYALALSGDGNRAHGLFDALNPITHSHDPSAAEVYRVEPYVV
                     AADVYGARDKLGRGGWTWYTGSAGWMYRAAVEGILGIARRPGGFAVDPRLPDEWPGYE
                     ATLCLDGKTRRIAVDRDGEDGELRIRVDGTGVAAGATIG"
BASE COUNT          912 a         2021 c         2024 g          986 t
ORIGIN      
        1 gaggtggtct gcctgctcta tgaccgcagc ctgccctcga gggagcggct ggccgtcagc
       61 aggcgcaacc tgctggaatg gacgccatcg cagctgatcg gcgacaggga cgacccccgg
      121 cttgcggccg aatatcgccg gatgatcgtg tcgcccctga tcggcggcgg cgcgatcctg
      181 gcctctgccg cggtcaatcc atccgccctt ccggtcgcgg tgattttcgc cgcgctgtgg
      241 atcgccgcgc cctggatcac ctttcgcgcc tcgcggtcgc tggaaacggt cgaccagttg
      301 cagatctcgg ccgaggacaa ggccgagttg cggcgcatcg cccgccgcat ctggcgctat
      361 ttcgacgaat tcgtcgacca gacgaccaac catctgccgc ccgacaatta tcaggaactg
      421 ccagccccga aactggccga acgcacctcg ccgaccaata tcgggctgta tctcatgtcg
      481 gtcatgtcgg cgcatgattt cggctggatc ggcctggaca cggcgctgaa acggatcgag
      541 gccaccatcg ccacgcttga acggatgcag cggtttcgcg ggcatttctt caactggtat
      601 gacaccagaa cgctgtcggt gctgcccgcg ccctatctgt cttcggtcga cagcggcaat
      661 cttgccggga tgctgatcgc gctgtcctcc ggtctgcggg gctgggcggc gcacgcgcct
      721 tcggtgcgcg tgcccgccac ggcggggctg cgcgacacgc tggacatcct gcgcgccgag
      781 ctggagctgc tgcgcgacga tcgccgtgcg ctgcgcgacc tgcacggcgc gatgagcgag
      841 gcgatcgacg gctatgcccg gtcggtggcg cacagcctgc ccggatcgct ggccgatccg
      901 gtcgcggccg ggcagttgat cagccgcgcc gcgaccatcc ggcgactggc gggcgatctg
      961 cacgcggcga ccccgcgcgg cgacgcggcc gagatcctgg cctggtccac ggcattggtg
     1021 cgcgacaccg ccgatgtcct gaacccggtc acaacccggc ccgaggcgct ggacaagttc
     1081 gtcctgcaga cccggcttct ggccgagcgg gcgcgcaacc ttgccttcgg gatggatttc
     1141 agcctgttcg tcgatcgcga aaagtcgctg atgtcgatcg gctatcgcac cgatgcgcag
     1201 gcgcttgacg gcagccgcta tgacctgctg gcctcggagg cgcggctgac cagtttcctg
     1261 gccatcgcca agggcgatct gggcaaggaa cattggtcgc gtctgggccg gcccttcgcg
     1321 atggtcggcc atcgcggcgc gcttctgtcc tggtcgggca gcatgttcga atacctgatg
     1381 ccgccgctgc tgctgaagga acgtcagggc ggcatcctca acctcgccga caagatggcg
     1441 gtcgcgatcc agatggaatg ggggcggtcg cacggcctgc cctggggcat ctcggaaagc
     1501 gcgttcaacg cccgcgaccg ggacatgaac tatcaatatt acgccttcgg cgttcccaac
     1561 ctggcgctga agcgttcggg cggcgattac gtggtggcgc cctatgcctc gatcctggcg
     1621 gcacagatcg acccgcaggc ggcgatcagg aacctggccg cgctgcgcga actgggcgcc
     1681 gagggccgct tcgggttcta tgacgcggtc gatttctcgc cacgccgcca gcgcgagggc
     1741 gccaatcaca gcgtcgtgaa gaacgtcatg gcccatcatc acggcatgtc gatgctggcg
     1801 atcggaaacg ccgttctcga cggcattcat cgcgaaaggt tccacgccga tccggtcgtg
     1861 cgcgcatcag aattgctgct gcaggaaaag tcgccgcgcg acatcacgcc ggtgacgcgc
     1921 gcgaccacgg ctttcggacc ggggcgggac acgctgctga gcagcggcga taccctgacc
     1981 gtggtcagcg atccgggccg ggccgaacgc gaggtggccc tgatgtcgac cggcgccttc
     2041 accatgttcg tgtcctcgac cggcgccggg cgcgccatgc tgggcaatat cgccctgaac
     2101 cggtggtccg ccgatccgac ccgggacgat ggcggtatcc atctgctcat gcgcgacatc
     2161 cagtcggggg aatggtggtc ggcgacccac gccccgtgca gcggggccga cgaacgcagc
     2221 acggtgatct tttccgatca caaggccgaa ttcttcaaga ccgccaacgc gatcgaaagc
     2281 cggctggaaa tcatcgcggc gaccgaaggc aatgccgacg gacgccgcct gaccctgcgc
     2341 aacctgtcgg ggcgcgaccg gaccatcgag gtgacctcgt atggcgagat cgtgctggac
     2401 gatccggcct cggaccgggc ccatcccgcc ttttccaaga tgttcgtcga aaccgagatc
     2461 cgcgacgagg gcgcgctgat catggcgcgg cgccggcccc gcgatccgcg cggccagtcg
     2521 ctgtatatgg cccatctggt gaccgggccg gatggtgcgc tgaccccggc cgccgaggcc
     2581 gaaaccgacc ggcgcgcctt tcttggccgc ggtcgcagcc tggccgacgc cgccgcgatg
     2641 aagagcggcg caaccctgtc ggggcgccag ggccatacgc tggatccgat cttcgccatt
     2701 cgcaggcata tccgcgtgcc ggccggaaaa tccgcctcga tcaccttctg gacgctgatc
     2761 gccgacagcg ccgaggactg cgcccggctg gccacccatt ttacccgccc cggctgtttc
     2821 gaacacgagt tgcggctggc atggacctat tcgcaggtcc agctgcgcca tctcggggtt
     2881 tcgctggatg aggcgaagct gtaccggcaa ttcgcaagcc tgctgatctg gcccgatctg
     2941 cgtcttgccg cgacgccgca gcggcgccgg gacatcggcc ggcagaacga attgtggccg
     3001 atgggaattt caggcgatgt tccgatcctg ctgctgcgga tcgacaacga ggccgatctt
     3061 ccgatcatcc gaaatgccat gcgcatgcat accttcctgc aaagccgggg cgtcttgcat
     3121 gatctggtga tcctcaacga acgcccgacc agctatgccc aggatctgca gcacggaatt
     3181 cagaccctgg tcgatgccgc cgtccacgcg gccggccagt ccggccccca tcatgcccat
     3241 gccgtgcgtc gcgatcagat aagccagggc agcttcgaca cgctgatatc ggcggcgcgg
     3301 atcatgctgc acacccgcaa cggcaagctt ttcgaacaat tggcgcggct gcgcgagacg
     3361 ccgccggctc cggcgcgcct tcggggctgt ggcgaacgcc ggcgcgacga tccccggcca
     3421 aggcctgcgt cccgatcgca gctggaattc tggaacggat ttggcgggtt cgcatccgac
     3481 ggtcgcgaat atgtgctgcg catcacccat gaccggcaga ccccccatcc ctggatcaac
     3541 gtgatcgcgc gtgacgattt cggcttccac gtctcggccg aaggggcgtc ctacacatgg
     3601 gcggtcaatt ctcgcgatta ccggatcacg ccctggacga acgatccggt catcaatgcg
     3661 ccgggcgaga cgatccttgt ccacgacccc gagaccggct gcgtcgccag ccccttcctg
     3721 gccacgtccg agccgggcga cgcggtcttc gaggcggcgc atggtctggg atattcgcgc
     3781 tttaccgccg attatggctg ggtcgtggtc gaggcggtga tgacgctggc ccgcgacgtt
     3841 ccggcgcggc tgacccggct gcgggtcacc aaccggacca ggcgacacct gcggctgcgc
     3901 ggcgtcgcct atgcccagct tgtccttggc accgacgcgg cggttgcggg cccgatggtc
     3961 cggaccggct ttgataccgg gcttgcggcc gccatcgggc gcaatcccta ttcggcggat
     4021 ttcgccgatc ggatcaccgc gctggcctgc gatcgcgagg tggacgccca ttgcggttcc
     4081 cggaccgcct ttctgggccg cgagggcgcg atttcctatc cggcggcgct ggaatcatgg
     4141 ccccgtcctg ccgcgcaggg cggcggcggc gcgcaagacg tcgaggcggc gggcgatccc
     4201 tgcgccgcca tccgctggcc gctgtccgtg gcgccgggcg agaccgccga gaccacgctg
     4261 atcctggcca atggcgacgc cgaaacgctg ccccgggtgc ttgccgccgc gcgcagcccc
     4321 ggcgcgttcg atgcggcgat gaacgccgcg cgggacgaat gggacagcgt tctgggaacg
     4381 ctgcagatcg acacgccgga cgacaagctg aacctgctgg tcaacacctg gcttccctat
     4441 caggcgctgg cctgccggat ccgggcgcgg accgcctttt accaggcatc gggggcgttc
     4501 gggttccgcg accagttgca ggataccagc gcgctgatcc tgcaggatcc gtccctgtgt
     4561 cgcaggcaga tcctgaacgc ggccgggcgc cagttcacca gcggcgatgt gcagcattgg
     4621 tggctgcccc gaacgggcgc cggtgtgcgc acgacgatct cggacgatgt ggtctggctg
     4681 ggccatgtga ccgcgcttta tattgccgcg acaggggacc gcgcgatcct ggacgagccg
     4741 gtggagtacc tttcgggccc cgaactggat cagggcgaac atgaccgctt cttcgtgccc
     4801 gattcctccg gcctgcggtc cccgctctat gaccattgtg ccagggcgct ggatctggcg
     4861 gtcgcgcgca ccggccgcaa cggattgccg ctgatcctgg gcggcgactg gaatgacggc
     4921 atgaaccgcg tcggcgaggc cggccaggga gaaagcgtct ggctgggctg gttcctgtgc
     4981 gccaccatcg atgccttcgc gccgctggcc gaggcgcgcg gcgacgcggc gcgtgcggcg
     5041 gcatggtcgg cgcatcgcca atcggtcgcg gcggcgctgg acaaggccgg ctgggatggc
     5101 gcctggtatc ggcgcggcta tttcgacgat ggcacgccgc tgggatccgc cgacagcgac
     5161 gaatgccgca tcgacagcat tgcccaaagc tgggcgctga tctcgggcgc ggggcgcgag
     5221 gatcgcgcgc agcagggtgt cgcccaggcg ttgtcgcatc tgttcgaccg cgaggcgcgg
     5281 atcatgcggc tgttcacgcc ggccttccgc gacacgccgc gcgagccggg ctatatcaag
     5341 tcctatccgc ccggcgtccg cgagaatggc gggcaatata cccatgcggc ggcctggatg
     5401 gtctatgcgc tggcgctgtc gggcgacggc aaccgcgccc atgggctgtt cgacgcgctg
     5461 aacccgatca cgcattcgca cgacccgagc gccgccgagg tctatcgcgt cgaaccctat
     5521 gtcgtcgccg ccgatgtcta cggcgcgcgc gacaagctgg gtcgcggggg ctggacctgg
     5581 tataccggat cggctggctg gatgtatcgc gcggcggtcg agggaattct gggcattgcc
     5641 cgcaggcccg gcggtttcgc ggtcgatccg cgcctgcccg acgaatggcc gggctatgag
     5701 gcgaccctgt gccttgacgg caagacccgc cgcatcgccg tcgatcgcga cggcgaggat
     5761 ggcgagctgc ggatccgtgt cgatggcacc ggtgtcgcgg ccggcgcaac aatcggctga
     5821 gccggcgagg cccgatcagc gccggcaatc cggcgcgcgc gcaaggccgt cgcggccggc
     5881 cagccagccg ggcggcgcgg tcggggggca tgtccggccg ccggaaccgc cgccttgcgt
     5941 gcc
//
LOCUS       DTVW01000312            1326 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1397298, whole
            genome shotgun sequence.
ACCESSION   DTVW01000312 DTVW01000000
VERSION     DTVW01000312.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1326)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1326)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1326
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1397298"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1132
                     /locus_tag="EYO87_04185"
     CDS             <1..1132
                     /locus_tag="EYO87_04185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011455071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="alpha-glucosidase"
                     /protein_id="HIC65193.1"
                     /translation="PDGTPPNNWLSLFGGSAWQWEGRREQYYLHNFLSAQPDLNFHNP
                     EVQDALLEMTAFWLDKGVDGFRLDTINFYFHDRKLRDNPPLAPELRKADTAPAVNPYN
                     HQSHRYDKSQPENLKFLERFAAMLKPHGAVVVGEIGDSERGLELLEDYTGVPGRVQMS
                     YVFDFLSGDGLQAARVVEVFDRLHSIAPNAWPCWAMSNHDVMRHISRWSLTDQAAKAY
                     CTLLMCLRGSVCLYQGEELGLPEAELQFEDLRDPYGIEFWPEYKGRDGSRTPMVWDMG
                     VNGGFSTSQPWLPVPHAHLQRTVVAQEADAQSVLHHYRWAIGLRNKHSALRLGSMSDM
                     KADGPILSFTRADSEQTLRIRANLSEEEVGGLAPWQVQVIEG"
     gene            1151..>1326
                     /locus_tag="EYO87_04190"
     CDS             1151..>1326
                     /locus_tag="EYO87_04190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HIC65194.1"
                     /translation="MADLKLKDIAKSYGDVQVLRDIDLEIASGEFIVFVGPSGCGKST
                     LLRMIAGLERITGG"
BASE COUNT          244 a          409 c          445 g          228 t
ORIGIN      
        1 gcccgacggg acgccgccga acaactggct gtcgctgttc ggcggcagtg cctggcaatg
       61 ggaaggccgg cgcgaacaat actacctgca caacttcctg tcggcgcaac cggatctgaa
      121 tttccacaac cccgaggttc aggacgcgct gctggagatg acggccttct ggctggacaa
      181 gggcgtggac ggctttcgtc tggacacgat caatttctat ttccacgacc ggaaattgcg
      241 cgacaacccg ccgctggcgc cggagctgcg caaggccgat accgcgccgg cggtgaaccc
      301 ctacaaccat caaagccacc ggtacgacaa gtcgcagccc gagaacctga aattcctcga
      361 acgctttgcg gcgatgctga aaccgcatgg cgccgtcgtc gtgggcgaga tcggcgacag
      421 cgagcgcggg ctggagctgc tggaggatta tacgggcgtg cccggccggg tgcagatgtc
      481 ctatgtgttc gatttcctgt cgggcgacgg cttgcaggcg gcgcgcgtgg tcgaggtctt
      541 tgaccggctg cacagcatcg cgccgaacgc atggccctgc tgggcgatgt cgaaccacga
      601 cgtgatgcgc catatcagcc gctggagcct gaccgatcag gccgccaagg cctattgcac
      661 gctgctgatg tgcctgcgcg gcagcgtctg cctgtatcag ggcgaagagc tgggcctgcc
      721 cgaggccgaa ttgcagttcg aggatctgcg cgatccctat gggatcgaat tctggcccga
      781 atacaagggg cgcgacggat cccggacgcc gatggtctgg gatatgggcg tgaatggcgg
      841 cttctcgacc agccagccct ggctgcccgt gccgcatgcc catctgcaac gcaccgtcgt
      901 cgcgcaagag gccgatgcgc aatcggtgct gcatcattat cgctgggcca tcggcctgcg
      961 caacaagcat tcggcgctgc gcctgggcag catgagcgac atgaaggccg acggcccgat
     1021 cctgtccttc acccgcgccg acagcgaaca gaccctgcgg atccgcgcca atctttcgga
     1081 ggaagaggtc ggcgggctgg cgccgtggca ggtccaggtc atcgagggct gaacggggag
     1141 gaaacgcggg atggccgatc tgaaactgaa ggacatcgcc aagtcctatg gcgacgtgca
     1201 ggttctgcgc gatatcgacc tggagatcgc ctcgggcgag ttcatcgtct ttgtcgggcc
     1261 ttcgggctgc ggcaagtcca cgctgctgcg catgatcgcg gggctggaac ggatcaccgg
     1321 cggcga
//
LOCUS       DTVW01000313            2169 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1398921, whole
            genome shotgun sequence.
ACCESSION   DTVW01000313 DTVW01000000
VERSION     DTVW01000313.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2169)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2169)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2169
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1398921"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..801)
                     /locus_tag="EYO87_04195"
     CDS             complement(<1..801)
                     /locus_tag="EYO87_04195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent class II
                     aminotransferase"
                     /protein_id="HIC65195.1"
                     /translation="MDRDHGGDIDRAARRFGTGDWLDLSTGINRRPWPVGTLPDHVWR
                     ALPTAAARDRLISVAAGRLGCDPSRVLPVAGASAAIQLLPRLLPRGRASVLAPSYNEH
                     AASLRAAGWTVDEVKDPQDMAGADLAVLVNPNNPDGREWRPQTLGRLAGRVGHLLVDE
                     SFADPRPDLSLAATCPDNTLILRSFGKFWGLAGLRLGFVIAAPAILSRIAEESGPWPV
                     NGPALEIGARAMADRDWAEDAILYHSEASLHLDHVAQRAGWQPLGGTHL"
     gene            975..1478
                     /locus_tag="EYO87_04200"
     CDS             975..1478
                     /locus_tag="EYO87_04200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018000860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglyceryl transferase"
                     /protein_id="HIC65196.1"
                     /translation="MAQTDHFIPSDEIHPIDIVEAVAAHHEWDFDRLADDQIAMVVEG
                     QWRSYSLTLAWSPREEVLRLICTFDMDPPADKLPLVYETLNLANDQVWDGGFTFWAQQ
                     RLMVWRYGLVLAGDQVASAEQVDRMIGNALIGCERFYPSFQLVGWGNAEPAAALDIAL
                     GEAFGRA"
     gene            1518..1847
                     /locus_tag="EYO87_04205"
     CDS             1518..1847
                     /locus_tag="EYO87_04205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012641087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-binding protein"
                     /protein_id="HIC65197.1"
                     /translation="MIGFDDFMKVDIRVGTIVRAEPFPEARKPAIKLWLDLGELGQRK
                     SSAQITKHYTPEALVGRQALCVVNFPPRQIGPVMSEVLVLGVPDDAGEVVLIAPDLSV
                     PDGGRLF"
     gene            1847..>2169
                     /locus_tag="EYO87_04210"
     CDS             1847..>2169
                     /locus_tag="EYO87_04210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010392818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycerate dehydrogenase"
                     /protein_id="HIC65198.1"
                     /translation="MKLLVTRPMTDRATASIAAQFDATFRDNTPLDEAGAARALRDYD
                     AILPTLGDAFTAGAFAGGDLRCRMLANFGAGYNHIDIAAARAAGVAVSNTPDVVTNAT
                     ADIALT"
BASE COUNT          364 a          700 c          741 g          364 t
ORIGIN      
        1 caggtgagtg ccgcccaagg gctgccatcc ggcgcgctgc gccacatggt ccagatgcag
       61 gctggcctcg gaatgataaa ggatcgcatc ctcggcccag tcgcgatcgg ccatggccct
      121 ggcgccgatc tcgagcgcgg ggccgttgac gggccagggc cccgattctt cggcgatccg
      181 cgaaaggatg gcgggggcgg cgatgacgaa gccgaggcgc aggcccgcga ggccccagaa
      241 cttgccgaag ctgcgcagaa tcagggtatt gtcgggacat gtggcggcca gcgacaagtc
      301 cgggcgtgga tcggcgaaac tttcgtccac cagcagatgg ccgacccggc ccgcgaggcg
      361 gccgagggtt tgcggccgcc attcgcggcc gtcggggttg ttcgggttca cgagaaccgc
      421 cagatccgcc cccgccatgt cctgcgggtc tttcacctcg tcgaccgtcc agcccgccgc
      481 gcgcaggctg gccgcgtgtt cgttatagct gggcgccagg accgaggcgc gtccgcgcgg
      541 cagcagccgt ggcaacagct ggatcgccgc cgaggcgccg gcgaccggca gcacgcggga
      601 aggatcgcaa cccagccggc cggcggcgac actgatcaga cgatcgcggg ccgcggcggt
      661 cggcagggcc cgccagacgt gatcgggaag ggtgccaacc ggccatggcc tgcggttgat
      721 cccggtcgaa aggtccagcc agtcccccgt gccaaagcgc cgcgccgcgc ggtcgatatc
      781 gcccccgtga tcgcggtcca tgccgttctc cccgttccgt ccacgccatt cgttaacgaa
      841 ttttcacttt actcgcgaga gattcgcgcc cacgatatat ggtaggaaca ttcgggcacc
      901 tatgcccggt attgtccaca gaccgagggt tagcggcgac agaatcgctc ccgcagagag
      961 gcaggatcca ggctatggct cagaccgatc atttcattcc cagcgacgag atccatccca
     1021 tcgatatcgt agaggctgtc gccgcccatc acgaatggga tttcgaccgt ctcgccgacg
     1081 accagatcgc gatggtggtc gaggggcagt ggcgcagcta ttcactgacg ctggcatggt
     1141 cgccgcgcga agaggtgctg cgcctgatct gcaccttcga catggacccg ccagccgaca
     1201 agctgccgct ggtctacgag acgctgaacc tggccaatga tcaggtctgg gacgggggct
     1261 tcaccttctg ggcgcagcaa cggctgatgg tctggcgcta tgggctggtt ctggccggcg
     1321 atcaggtcgc ctcggccgag caggtcgacc ggatgatcgg caatgccctg atcgggtgcg
     1381 aacggttcta tccctcgttc cagctggtcg gctggggcaa cgcggaaccc gcagccgcgc
     1441 tggacatcgc cctgggcgaa gccttcggac gggcctgagg gtccgttgcg ccctgccgat
     1501 gcgagaaacc gcgcatgatg atcggtttcg acgatttcat gaaggtcgat atcagggtcg
     1561 gcacgatcgt ccgggccgaa cctttccccg aggcgcgaaa gccagccatc aaactgtggc
     1621 tggatcttgg ggaactgggc cagcgcaaat cctcggccca gatcacgaaa cattatacac
     1681 ccgaagccct ggtcggaagg caggccctgt gcgtggtgaa ttttccgccg cgccagatcg
     1741 gtccggtcat gtccgaggtg ctggttctgg gcgtgcccga cgatgccggc gaggtggtgc
     1801 tgatcgcgcc ggatctgtcc gtgcctgacg ggggaaggtt gttctgatga agcttctggt
     1861 cacgcgcccg atgacggatc gggcgaccgc atccatcgcc gcgcagttcg atgcgacctt
     1921 ccgcgacaac acgccgctgg acgaggcggg cgcggcgcgg gccttgcgcg actatgacgc
     1981 gatcctgccg acgctgggcg acgccttcac ggcgggtgcc tttgccggcg gcgatctgcg
     2041 ctgccggatg ctggcgaatt tcggcgccgg ctacaaccat atcgacattg ccgcggcgcg
     2101 ggcggcgggg gttgcggttt cgaacacgcc ggacgtggtg acaaacgcca ccgccgatat
     2161 cgcgctgac
//
LOCUS       DTVW01000314            2567 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1400495, whole
            genome shotgun sequence.
ACCESSION   DTVW01000314 DTVW01000000
VERSION     DTVW01000314.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2567)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2567)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2567
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1400495"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(55..294)
                     /locus_tag="EYO87_04215"
     CDS             complement(55..294)
                     /locus_tag="EYO87_04215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65199.1"
                     /translation="MSRIVTRPEGERKQVTAVFLDLVGFSEVASTSDAEDLQDWLEEY
                     YRRCGEIVEINGGEVSASSAWTVRRSVIWGKGISV"
     gene            complement(325..>2567)
                     /locus_tag="EYO87_04220"
     CDS             complement(325..>2567)
                     /locus_tag="EYO87_04220"
                     /inference="COORDINATES: protein motif:HMM:PF01593.22"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65200.1"
                     /translation="ADLGGGDTARRIGYLVSLSLAFCRGAIDNGLFREGFDAIDDQEI
                     STWLLQCGASREAVCSAVFRGCYDYVFGYPGGVTDDREVGAGTAIRGLLRLAFTYKGA
                     LFYKMQAGMGDTVFAPYYQVLKSRGVRFRYFNAATNLALAPDGNAVVAIDMVEQAKVL
                     SGDYEPLVDVRGLPCWPSEPDWSQLRDGAALKAEGVDFESEKSVPSGRAYRLEQGRDF
                     DLVILGASLGSLHYLTPELAAASTRWNAMLKNLPTVATQAAQFWCTKTPEELGWNALV
                     AAHNSGDQGDLRTVITSFAEPLDTWADMSDLLTREDWPADGPTAIAYFCSPAQDAGTG
                     PDRWPDAVRNWADADLTRLWPGAGKAGKFDASILYADGARTPDDKFAGQYFRQNFYGS
                     ERYVLSVPNTVQYRLPPDESGFENLYLAGDWTRCGINAGCVEAATISGLMAARGLTGA
                     DFKIVGEGDLAPDAGPTDATKLSSPYAQSAPWPLTPVYGTGQIDGWFSFHAVDARALE
                     AVLPDGMSLHPQTLTPEGQHPVAILANQQVGVRASILPKIMGYRNYCEAIIAINFVQV
                     EGHEGVFSYLPNLYLTNNWARLAGIWWYGYNKRMGRLQMGNGHYSVAATDGRPIWSGR
                     YQQKDFARPLTHSPDCGLVQSLAEQIVVSEGKFSRWQFSSFDFNLTSAYVAGVSARID
                     VTDAALANIPQGRMTAQPLAMGAVQENGLHKLPGAFRIWTSWTLSNPLDNSRIAQLEG
                     ERTKLP"
BASE COUNT          473 a          861 c          780 g          453 t
ORIGIN      
        1 ccgagagccc acaagggtgg catcgtccgt cccgctgttc ccccatttca cgagctagac
       61 ggagattccc ttcccccaga tcaccgaccg gcgcaccgtc caggctgatg acgccgacac
      121 ctcgccgcca ttgatctcga cgatctcgcc gcagcgccgg taatattcct cgagccagtc
      181 ctgcaaatct tccgcatcgg aggtgcttgc gacttcgctg aacccgacca gatccagaaa
      241 gaccgccgtg acctgcttcc gctcgccctc ggggcgggtc acgatccggg acattgcggc
      301 tcctctcgac ccttgccgct gacgctacgg caatttcgtt ctttcccctt ctagttgagc
      361 tatcctgctg ttgtccaacg gattcgacag ggtccagctg gtccagatcc ggaatgcgcc
      421 gggcaattta tgcaaaccgt tctcttgcac cgcgcccatg gcaaggggct gcgcggtcat
      481 cctgccctgg ggaatattgg ccaatgcggc atccgtcacg tcgatccgcg cgctgacccc
      541 ggcgacatag gccgaggtca gattgaaatc gaaggacgag aattgccagc ggctgaactt
      601 gccttccgac accacgatct gctcggcaag tgattgcacc aggccgcaat cgggcgaatg
      661 cgtcagcggc cgcgcgaaat ccttctgctg gtagcggccc gaccagatcg ggcgcccatc
      721 ggtggcggcg accgagtagt gaccattgcc catctgcaac cggcccatcc gcttgttgta
      781 gccataccac catatcccgg ccagccgcgc ccaattgttg gtgaggtaga gattgggcag
      841 atagctgaac acgccctcat gcccctcgac ctgcacgaaa ttgatcgcga tgatcgcctc
      901 gcagtagttg cgatagccca tgatcttggg aaggatcgag gcccgcacgc cgacctgctg
      961 attggccagg atcgcgaccg ggtgctgacc ctcgggcgtc agcgtctggg gatgaaggct
     1021 cattccgtca ggcagaaccg cctcgagcgc gcgggcatcg acggcatgaa agctgaacca
     1081 gccgtcgatc tggccggtgc catagaccgg cgtcagcggc cagggcgcgg actgggcata
     1141 ggggctggac agtttcgtgg catccgtcgg tcccgcatcg ggggcaagat caccctcgcc
     1201 gacgatctta aagtcggccc cggtcaatcc gcgcgcggcc atcaacccag agatggtcgc
     1261 ggcctcgacg caaccggcat tgatcccgca gcgtgtccag tcaccggcca gatagaggtt
     1321 ttcaaagccc gattcatcgg gtggcaggcg atactggacc gtgttcggca cggacagcac
     1381 atagcgttcc gaaccgtaga agttctgccg gaaatattgt ccggcaaact tgtcatcggg
     1441 ggtccgggcg ccgtcggcat aaagaatcga ggcgtcgaat ttgccggcct ttcccgcccc
     1501 gggccagagc cgggtcaggt ccgcatcggc ccagtttcgc accgcatcgg gccagcggtc
     1561 gggaccggtg cccgcatcct gcgccggact gcaaaaatag gcgatggcgg ttggcccatc
     1621 cgccggccag tcctctcgcg tcagcagatc ggacatgtcg gcccaggtat cgagcggctc
     1681 ggcgaaactg gtgatcaccg ttctcagatc gccctggtcg ccggaattat gcgccgcgac
     1741 cagggcgttc cagcccagtt cctcgggcgt tttggtgcac cagaactgcg cggcctgcgt
     1801 tgccacggtg ggcaggttct tcaacatcgc attccagcgg gtcgaggccg cggccagttc
     1861 cggcgtcaga taatgcagcg atcccagcga cgcacccaga atcaccaggt cgaaatcccg
     1921 tccctgctcc aggcgatagg cgcgccccga cggcaccgat ttctcggatt cgaaatcgac
     1981 gccctcggcc ttcagcgccg ccccgtccct gagctggctc cagtcaggtt ccgagggcca
     2041 gcagggcaag cccctgacat cgaccagcgg ctcgtagtcg cccgacagga ccttggcctg
     2101 ttcgaccatg tcgatggcga cgacggcgtt cccgtccggc gcaagggcaa ggttggtggc
     2161 ggcattgaag tatctgaacc gcaccccgcg cgatttcagc acctgataat agggcgcgaa
     2221 gaccgtgtcc cccatgccgg cctgcatctt gtagaacagc gcgcccttgt aggtgaaggc
     2281 caggcgcagc aggcccctta tggcggtgcc cgcgccgacc tcgcgatcgt ctgtcacgcc
     2341 gccgggatag ccgaaaacgt aatcgtagca gccccggaac acggcggaac agacggcctc
     2401 gcggctggcc ccgcattgca gcagccaggt gctgatttcc tgatcgtcga tcgcgtcgaa
     2461 gccctcgcga aacaggccgt tgtcgatggc accgcgacag aaggccagcg acaggctgac
     2521 cagatagccg atccggcgcg ccgtgtcgcc gccacccaga tcggcgg
//
LOCUS       DTVW01000315            1997 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1401640, whole
            genome shotgun sequence.
ACCESSION   DTVW01000315 DTVW01000000
VERSION     DTVW01000315.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1997)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1997)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1997
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1401640"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..609)
                     /gene="pgk"
                     /locus_tag="EYO87_04225"
     CDS             complement(<1..609)
                     /gene="pgk"
                     /locus_tag="EYO87_04225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010392592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HIC65201.1"
                     /translation="MADFHTIDDMDLEGKIVLTRVDLNVPVAEGRVTDATRIEKIVPT
                     VKDIQARGGIPVLLAHFDRPKGRRVESMSLKQIVPALEQALGQGVVFAEDCIGGPAKR
                     AVSALNPGDVALLENTRFHEGEETNDPTFAASMGALGGAYINDAFSASHRAHASTEGL
                     ARLLPAGAGRLMESEMKALDAALGHPERPVMAVVGGAKVSTKL"
     gene            781..1287
                     /locus_tag="EYO87_04230"
     CDS             781..1287
                     /locus_tag="EYO87_04230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020040159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HIC65202.1"
                     /translation="MAEIKDPENTVIIALKDGPVVVELLPDVAPRHAERMKELARAGK
                     YDNVAFHRVIDGFMAQTGDVEHANMEQDYNPGRAGTGGSDLPDLPAEFSKLPHDRGTL
                     GAARSQNPNSANSQFFINFGDNHFLNGQYTVYGRVIEGMEHVDKIARGEPPASPDRMI
                     SVKVAADA"
     gene            1280..1873
                     /locus_tag="EYO87_04235"
     CDS             1280..1873
                     /locus_tag="EYO87_04235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010392590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HIC65203.1"
                     /translation="MRSLILIPALALMAGAALAQEAPKAEDGPGPNMVIEVAAADGTP
                     KGTITLDLFADKAPNHVARLVELTKEGAYDGVVFHRVIDGFMAQTGDVEYGQRDGETA
                     MAGTGGSDKPDLQAEFNDVSFQAGTVGMARAQDPDSANSQFFIDLAPATFLDGEYTVV
                     GQLIEGWDVLNSIKKGDADANGAVENPDYMAKVTIAE"
BASE COUNT          360 a          653 c          654 g          330 t
ORIGIN      
        1 cagcttggtc gagaccttgg ctccgccaac gaccgccatc accgggcgtt cgggatggcc
       61 aagcgccgca tccagggcct tcatctcgga ttccatcagg cgcccggcac cggcgggcag
      121 cagccgcgcc agcccctcgg tcgaggcatg ggcgcgatgc gaggccgaaa aggcgtcgtt
      181 gatataggcc ccgccaagcg cgcccatcga ggccgcgaag gtcgggtcgt tcgtctcctc
      241 gccctcgtga aaacgggtgt tttccagcaa ggccacatcg ccgggattca gcgcggagac
      301 ggcgcgcttg gccggcccgc cgatgcagtc ctcggcgaag acgacgcctt ggccaagcgc
      361 ctgttccagc gccgggacga tctgtttcag gctcatcgac tcgacgcgac ggcccttggg
      421 acggtcgaaa tgggccagca ggaccggaat gccgcccctg gcctggatgt ccttgacggt
      481 cggcacgatc ttctcgatcc gggtggcatc ggtgacgcgg ccctctgcga ccggcacgtt
      541 cagatcaacg cgggtcagca cgatctttcc ctccagatcc atgtcgtcga tggtgtggaa
      601 atctgccatg gcgcgtcctt tcgatctctg ccgtcgccga ggcttgtccc gcaggacgaa
      661 gcgcgcgtca actgcgccgg tcggctgacg gcagcgtgat cccgccgtca cgggcttgcg
      721 cgttgccctt gtgccgcgaa agccctagat cacgggtgaa cctgtggaaa ggaggcccgt
      781 atggccgaga tcaaggatcc cgagaatacc gtcatcatcg cgctgaagga cggcccggtc
      841 gtggtcgaac ttctgcccga cgtggcgccc agacatgccg agcggatgaa agagctggcc
      901 cgcgcgggca aatacgacaa tgtcgccttt caccgggtga tcgacggttt catggctcag
      961 accggcgacg tggaacacgc caatatggaa caggattaca atcccggccg cgcgggcacg
     1021 ggtgggtcgg acctgcccga cctgccggcc gaattctcga agctgccgca tgaccgtgga
     1081 acgctgggcg cggcgcgatc gcagaatccg aacagcgcca acagccagtt cttcatcaat
     1141 ttcggcgaca atcatttcct gaacggccag tataccgtct atggccgcgt gatcgagggg
     1201 atggagcacg tggacaagat cgcccgcggc gaaccgcccg caagtcccga ccggatgatc
     1261 tcggtcaagg tggctgccga tgcgtagcct gatcctgatc cccgccctcg cgctcatggc
     1321 cggtgcagcc ctcgcccagg aggctccgaa agccgaggat ggccccggcc cgaacatggt
     1381 gatcgaagtg gccgccgccg acggcacgcc aaagggtacg atcaccctgg acctgtttgc
     1441 cgacaaggcc ccgaaccatg tcgcccgcct ggtcgaactg acgaaagagg gcgcctatga
     1501 cggcgtcgtc ttccatcgcg tcatcgacgg gttcatggcc cagaccggcg acgtggaata
     1561 tggccagcgc gatggcgaga ccgcgatggc gggcaccggt ggctcggaca agcccgacct
     1621 tcaggccgag ttcaacgatg tctcgtttca ggccggcacg gtcggcatgg cccgcgcgca
     1681 ggatcccgac agcgccaaca gccagttctt catcgacctt gcgcccgcga cctttctgga
     1741 tggggaatat acggtcgtgg gtcagctgat cgagggatgg gacgtgctga attcgatcaa
     1801 gaagggcgac gccgacgcca atggcgcggt cgaaaatccc gattacatgg ccaaggtgac
     1861 catcgccgag tgatcggcgc cagaattccg gatgcagcgg ggtccgcctg acgggccccg
     1921 atttccttgc gcggcattcg gtcttcggcg gcgtgcgctg caggcggccg gttcggccgg
     1981 caaggccccg cgcgaca
//
LOCUS       DTVW01000316            2528 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1402242, whole
            genome shotgun sequence.
ACCESSION   DTVW01000316 DTVW01000000
VERSION     DTVW01000316.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2528)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2528)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2528
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1402242"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            18..404
                     /locus_tag="EYO87_04240"
     CDS             18..404
                     /locus_tag="EYO87_04240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003598532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2380 domain-containing protein"
                     /protein_id="HIC65204.1"
                     /translation="MLPVKLLDTSREPGDQGAAHEARLLLLADVLKAETKGAILLDAA
                     AIADCQPQTTACLLDKARATGADRALFVVVQKTSTLILQIFANLVDVGTGDLIVSRNL
                     NFRGDNDESWRRAARFLARQLRDASN"
     gene            complement(401..871)
                     /locus_tag="EYO87_04245"
     CDS             complement(401..871)
                     /locus_tag="EYO87_04245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016918088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HIC65205.1"
                     /translation="MNRKVATCFWFDHQAMEAAEFYVSLLPDSRIVDVSHYIEEQDMA
                     PAGRVLAVDFTLAGTPYMALNGGPHFTLSEAASIRVMTEDQAETDRLWAALIADGGAE
                     SRCGWLKDRFGMSWQIVPRRAMALITGSEAGRVWPALMAMGKIDIAALESAARG"
     gene            complement(946..1410)
                     /locus_tag="EYO87_04250"
     CDS             complement(946..1410)
                     /locus_tag="EYO87_04250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014198212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyketide cyclase"
                     /protein_id="HIC65206.1"
                     /translation="MKDAEFELVLDRVMGAPREAVWRCWTDPHLLEQWFCPRPWHVTD
                     AVLELRPGGQFSTVMHGPDGEEFPTMGVFLEVVEGRKLVSTDAFTPGWRPAGKPFMAS
                     EAVLDDAGEGRTRYIARAMHWNAETLKEHEAMGFHEGWGRAADQLEALAKSL"
     gene            complement(1407..2042)
                     /locus_tag="EYO87_04255"
     CDS             complement(1407..2042)
                     /locus_tag="EYO87_04255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001328100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HIC65207.1"
                     /translation="MGRKTRHDPDRGDARTRLLEAARDIVRAQGFAATSVDQLCRAAG
                     VTKGAFFHHFASKEALGVAAAEYWTEMTGSLFEAAPYHDHDDPLDRVLAYVDFRREII
                     AGDPAAFTCLAGTMTQEAFHLHPAIRDACAASIFGHAATLEPDIAAAMAARGLTGISP
                     ASLAAHMQAVLQGAFILAKAADDPSVARDSVDHLQRYLRLLFSTPPEGRTT"
     gene            complement(2109..2435)
                     /locus_tag="EYO87_04260"
     CDS             complement(2109..2435)
                     /locus_tag="EYO87_04260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014880327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="competence protein TfoX"
                     /protein_id="HIC65208.1"
                     /translation="MDSDLVTIGNIGPATARALTAAGVADAASLRRIGAHEAYRALLV
                     AGGRPHFIGYYVLHMALQGRPWNDCRGEEKVALRRRFDSLVAEMKGVSRSEIDAALDQ
                     IGLRRG"
BASE COUNT          442 a          859 c          790 g          437 t
ORIGIN      
        1 ccgccgagcc gctggcgatt ctgccggtca agctgctgga cacgtcgaga gagcccggcg
       61 atcagggcgc ggcgcacgag gcgcggctct tgttgctcgc cgatgttctg aaggccgaga
      121 cgaagggagc gattctgctg gacgcggcgg cgatagccga ttgccagccg cagaccaccg
      181 cctgcctgct ggacaaggcc cgcgcgaccg gggccgaccg ggcgctgttc gtggtggtgc
      241 agaagaccag cacgctgatc ttgcagattt tcgccaatct cgtcgatgtc gggacgggcg
      301 acctgatcgt cagccgcaac ctgaatttca ggggcgacaa tgatgaaagc tggcgccgcg
      361 cggcccgctt tctggcgcgg cagttgcgcg atgcctcgaa ctagccgcgg gcggcggatt
      421 ccagcgcggc gatgtcgatc ttgcccatcg ccatcagcgc cggccagacc ctgcctgcct
      481 ccgatccggt gatcagcgcc atcgcccggc gcgggacgat ctgccaggac atgccgaaac
      541 ggtccttcag ccaaccgcat cgcgattccg ccccgccatc cgcgatcaat gccgcccaga
      601 gccggtcggt ctcggcctgg tcctcggtca tcacgcggat cgaggcggcc tcggacaggg
      661 tgaaatgcgg ccccccgttc aatgccatgt agggcgtgcc ggccagcgtg aaatcgaccg
      721 ccagaacgcg tcccgccggc gccatgtcct gttcctcgat ataatggctg acgtcgacga
      781 tgcggctgtc gggcagcagc gagacataga attccgccgc ttccatcgcc tgatgatcga
      841 accagaaaca tgtcgcaacc ttgcggttca tcgctgctct cccgtcgcca ggtgtccgcc
      901 atcggttcca ggggattccc gatcaccaat gtttcgctgc gcgcgtcaca gggatttcgc
      961 cagcgcctcc aactggtcgg cggctctgcc ccagccttcg tgaaagccca tggcctcgtg
     1021 ttccttcagc gtctcggcgt tccagtgcat ggcgcgggcg atatagcggg tgcgcccctc
     1081 gccggcatcg tccagcacag cctcggaggc catgaagggt ttgcccgccg gacgccagcc
     1141 gggcgtgaag gcgtcggtcg aaaccagctt gcgcccctcg accacttcca ggaacacgcc
     1201 catcgtggga aactcctccc cgtcaggacc gtgcatcacg gtcgagaatt gcccacccgg
     1261 acgcaattcc agaactgcat cggtgacatg ccacggcctg gggcagaacc attgttccag
     1321 caggtgcgga tcggtccagc agcgccagac ggcctcacgc ggggcgccca tcacgcggtc
     1381 cagaaccagt tcgaattcgg cgtccttcat gtggttctcc cttcgggtgg tgttgaaaac
     1441 agcaacctca gatagcgttg cagatgatcg acgctgtctc tggcgaccga gggatcatcg
     1501 gcagccttgg caaggatgaa cgccccctgc aataccgcct gcatatgggc ggcaaggctg
     1561 gcggggctga taccggtcag gccgcgggcc gccatcgcgg cggcgatgtc cggctccagc
     1621 gtggcggcgt ggccgaagat cgaagcggcg caggcgtcgc gaatcgccgg atgcaggtga
     1681 aacgcctctt gtgtcatggt gcctgcgagg caggtgaagg ccgcgggatc gccggcgatg
     1741 atttcgcggc gaaaatcgac ataggccagc acccggtcca gcgggtcgtc atggtcgtga
     1801 tagggcgcgg cttcgaacag cgacccggtc atctcggtcc agtattccgc cgccgccacg
     1861 cccagggcct ccttgctggc gaaatggtga aagaacgccc ccttcgtcac acccgccgcc
     1921 ctgcacaact gatcgacact ggtcgcggca aagccctgtg cccggacgat gtcgcgcgcc
     1981 gcctccagca gccttgtccg cgcatcgccc cgatccggat catgccgtgt cttgcgtccc
     2041 atgtcctgaa tataccaacc ggttggtatc tacgacaaga aaaaatttcc ctctggtttc
     2101 agggtcaatc agcctcgtcg caggccgatc tggtccaggg cagcgtcgat ttccgaccgt
     2161 gaaacgcctt tcatttcggc cacgagcgaa tcgaaccggc gacgcagcgc gaccttttcc
     2221 tcgccccggc aatcgttcca cggccgaccc tgcaaggcca tgtgcagcac gtaatagccg
     2281 atgaaatgcg gccgcccgcc cgcgaccagc agcgcgcgat aggcctcgtg cgcgccgatt
     2341 cggcgcaggc tggctgcgtc ggccacccct gcggcggtca gcgccctcgc ggtcgcgggg
     2401 ccgatattgc cgatagtgac gagatcgctg tccatggccg cctttccaag acccgccctt
     2461 tgctgtatca gcacccggat tccaaggaca gcatgacatg agcgacaagg ccagcaccgc
     2521 gccggtga
//
LOCUS       DTVW01000317            1051 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1402499, whole
            genome shotgun sequence.
ACCESSION   DTVW01000317 DTVW01000000
VERSION     DTVW01000317.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1051)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1051)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1051
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1402499"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            372..>1051
                     /locus_tag="EYO87_04265"
     CDS             372..>1051
                     /locus_tag="EYO87_04265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HIC65209.1"
                     /translation="MEKPLNNRAWLLVLPVLALVAFSAVLPLMTVVNYSFQDTFGGNQ
                     FFWAGLEWFDETIRSDRVRAALGRQILFSAIILAIEIPLGIFVALNMPKKGVWASFCL
                     VLMALPLLIPWNVVGTIWQVFGRVDIGLLGYTLSKLGIDYNYVNDAFDAWITVIVMDV
                     WHWTSLVALLCYAGLQSIPDAYYQAARIDQASRWKVFRHIELPKMRGVLLIAILLRFM
                     DSFMIYTEP"
BASE COUNT          160 a          335 c          338 g          218 t
ORIGIN      
        1 atcggctcgc ccggcatgaa cctgctggat gcgcgggtcg agggcgcgac ggcgcaggtg
       61 gcgggcgtgc cgatcgcgct ggcgcggggc tatgggccgc tatcgggcag gatccggatc
      121 ggcatccgcc ccgaattcat gcgcctcggc accggcggcg agggcctgcc cttcatgctg
      181 caccggatcg aggatgtggg caatcaccgg atcgtacgcg gccatgtcga aggcgctgcg
      241 gtcaacgtca tcgtccccga gggccagccc attcccgccg gggcggaccg gatcatcccc
      301 gatcccgcct tcatccatgt ctatgccgat gactggcgcg tcgatccggc cgccgtggaa
      361 agggccgcct gatggaaaaa cccctcaaca accgcgcctg gctgctggtt ctgccggtcc
      421 ttgcgctggt cgccttctcg gcggtgctgc cgctgatgac ggtggtgaat tactcgttcc
      481 aggatacgtt cggcggcaac cagttcttct gggcgggcct cgaatggttc gacgagacga
      541 ttcgctcgga ccgcgtccgc gcggcccttg gccggcagat cctgttctcg gcgatcatcc
      601 tcgccatcga gattccgctg ggcatcttcg tggcgctgaa catgccgaaa aagggcgtct
      661 gggcctcttt ctgcctggtg ctcatggcgc ttccgctgct gatcccgtgg aacgtggtcg
      721 gcacgatctg gcaggtcttc ggccgcgtcg atatcggcct tctgggctat acgctgtcga
      781 aactgggcat cgactacaat tatgtgaacg acgccttcga tgcgtggatt acggtgatcg
      841 tgatggatgt ctggcactgg accagcctgg tcgcactgct gtgctatgcc gggctgcaat
      901 ccatccccga cgcctattat caggccgcgc ggatcgacca ggcttcgcgc tggaaggtat
      961 tccgccatat cgagcttccc aagatgcggg gcgtgctgct gatcgcgatc ctgctgcgct
     1021 tcatggacag cttcatgatc tataccgaac c
//
LOCUS       DTVW01000318            1169 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1402954, whole
            genome shotgun sequence.
ACCESSION   DTVW01000318 DTVW01000000
VERSION     DTVW01000318.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1169)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1169)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1169
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1402954"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            46..717
                     /locus_tag="EYO87_04270"
     CDS             46..717
                     /locus_tag="EYO87_04270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008242945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanine-N2)-dimethyltransferase"
                     /protein_id="HIC65210.1"
                     /translation="MGTEERLKRIDDSLSHKQPTLQVMLANVHSSQNLSAIIRSADAV
                     GVLDIFYSSKENKTLRIHKTITQGAHRWTHRHRITDGHTVKFLQEKKNEGFQVIVTHL
                     EERAVSFRDIDYTKPTLLVMGNEKEGVSSEIIAEATDVIVIPMQGMVQSLNVSVATAL
                     ILYEAQRQLEDAGKYLTPQLIQKRREEIKAAWVYRDTVARRSKGQIALEFQENIIDFS
                     LGNSH"
     gene            complement(733..>1169)
                     /locus_tag="EYO87_04275"
     CDS             complement(733..>1169)
                     /locus_tag="EYO87_04275"
                     /inference="COORDINATES: protein motif:HMM:TIGR02481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65211.1"
                     /translation="LYAEQVEYMDVNEMQETHDEEIAILNEVDKLATYYWMDKSKDKM
                     EALEAKLDEYLAHVKVHFANEERLMNKYDFPNYEMHKMAHDMFLMDISLAIKQWKHSG
                     NIDKIIRFIRNSPEWIVMHINTVDAPTSIYLSREMAKEAKKK"
BASE COUNT          376 a          226 c          217 g          350 t
ORIGIN      
        1 gatggtaggt aaaacaaaac ttctaagagt tgatggtatt tagacatggg cacagaagaa
       61 agactgaaac gcattgacga cagtctttct cacaaacaac ccacactaca agtgatgtta
      121 gccaatgtac atagctcaca aaacctctca gctatcatac gctctgctga tgcagtgggt
      181 gtcttagaca tcttttactc tagcaaagaa aataaaacgt tgcgtataca caaaaccatc
      241 actcaagggg cacatcgttg gacacataga catcgtatta cagatggaca tactgtaaaa
      301 tttttacaag aaaagaaaaa tgaaggtttt caagtcatag tgacacattt agaagaacgt
      361 gcagtatcat ttagagacat tgactatacc aaacctacct tgcttgtaat gggcaatgaa
      421 aaagaagggg taagttctga aatcatcgct gaagctacag atgtcattgt catccctatg
      481 caaggtatgg tacaaagcct caatgtctct gtagccacag ccctcatact ctatgaagca
      541 caaagacagt tagaagatgc aggcaagtac cttacaccac aactgattca aaaaagaaga
      601 gaagagataa aagctgcatg ggtttatcgt gatactgtcg cacgtagaag taaagggcaa
      661 atagccttag agtttcaaga aaatattatt gatttttctt tgggcaattc tcactaaatc
      721 ttctagtgag ctttactttt tctttgcttc tttagccatc tcacgtgaga ggtagattga
      781 tgtgggggca tccacggtgt taatgtgcat cactatccac tctggtgagt tacgtataaa
      841 acgaataatc ttatctatgt tacctgaatg cttccattgt ttgatggcaa gagaaatatc
      901 cattaaaaac atgtcatgtg ccattttatg catctcatag ttaggaaaat catatttatt
      961 cataagacgt tcttcattag caaagtgtac tttgacatgc gcaagatact catcaagctt
     1021 tgcttctagt gcttccattt tgtctttgct tttatccatc caataatagg tagcaagttt
     1081 atcgacttca tttaagatgg ctatctcttc atcatgtgtc tcttgcattt cattaacatc
     1141 catgtattca acttgctctg cgtatagta
//
LOCUS       DTVW01000319            1436 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1405661, whole
            genome shotgun sequence.
ACCESSION   DTVW01000319 DTVW01000000
VERSION     DTVW01000319.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1436)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1436)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1436
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1405661"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..301
                     /locus_tag="EYO87_04280"
     CDS             <1..301
                     /locus_tag="EYO87_04280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007798700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HIC65212.1"
                     /translation="KQMVVAAASDQILYTPLFSGTHANYLAASIEAAGVDLDEARLAQ
                     PRRMGAKTDPDRPRAWSQVWSAGQAVAQSRALQPAAEVVARLEREYHAAKTALCG"
     gene            316..>1436
                     /locus_tag="EYO87_04285"
     CDS             316..>1436
                     /locus_tag="EYO87_04285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014995683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA alkylation response protein"
                     /protein_id="HIC65213.1"
                     /translation="MSQTNESNVPDSRGMNAYHADPTFAALLSLYVPNSLHRVLELQL
                     ARMGALVGDRLEQLALAADKNPPTLSLRDRTGAAVERIEKHPAYEELERYAFGEFGLA
                     AMSHRGGVFGEPDKLHPMAKYALVYLFVQAEFGLCCPLSMTDSLTRTLRKFGSNELVS
                     RYLDRLTSQDMDSLYQGAMFMTEQAAGSDVGAVETVARQQDGGWKLYGDKWFCSNPDA
                     ALAMVLARPEGGETGTRGLSLFLLPRHLPDGRLNDYRIIRLKDKMGTRSMASGEIVLE
                     GAEAYLVGEAGQGFKQMTDMINMSRLANGVRSAGLMRRSVAEALHISRHRRAFGKSLM
                     DMPLMRRQLAKMLLAAEQGRSMVFHTAQVLDAADRGDAE"
BASE COUNT          250 a          459 c          496 g          231 t
ORIGIN      
        1 caagcagatg gtcgtcgcgg cggcgtcgga ccagatcctc tatacaccgc tgttctcggg
       61 cacccatgcc aactacctcg cagcgagcat cgaggcggcg ggtgtcgatc tcgatgaggc
      121 gcggctggcg cagccgcgcc gcatgggggc caagaccgat cccgacaggc cgcgcgcctg
      181 gtcgcaggtc tggagcgcgg gacaggcggt ggcgcaatcg cgcgcgctgc agcccgctgc
      241 cgaggtcgtg gcgcggctcg agcgcgaata tcacgccgcg aaaacggcgc tctgcggctg
      301 aggaggagac gcaccatgag ccagaccaac gagagcaatg tccccgacag ccggggcatg
      361 aatgcctatc acgcggatcc gacctttgcg gcgctgctgt cgctctatgt gccaaactcc
      421 ctgcaccggg ttcttgagct gcagctggcg cgcatgggcg cgctggttgg agaccggctc
      481 gagcaactgg cactggccgc agacaagaac ccgcccaccc tgtcgctgcg cgaccggacc
      541 ggcgcggcgg ttgagcgtat cgagaaacac cccgcctatg aggagctcga gcgttatgcc
      601 ttcggcgagt ttggcctagc cgccatgtcg caccgcggcg gagtctttgg cgagcctgac
      661 aagctgcacc cgatggcgaa atacgcgctg gtctatctct ttgtgcaggc ggagttcggg
      721 ctgtgctgtc cgctcagcat gacagactcg ctgacccgca ccctgcgcaa gtttggctcg
      781 aatgaactgg tctcgcgcta tctcgaccgg ctcaccagtc aggacatgga cagcctgtac
      841 caaggcgcga tgttcatgac cgagcaggcg gctggatccg atgttggcgc ggtcgagacc
      901 gtggcgcgcc agcaggacgg cggctggaag ctctatggcg acaaatggtt ctgttcgaac
      961 cccgacgcgg cgctggcaat ggtgctcgcg cggccagagg gcggcgagac cgggacccgc
     1021 ggcttgtcgc ttttcctgct gccacggcac ctgccggacg ggcggctcaa cgattaccgg
     1081 atcatccggc tcaaggacaa gatgggcacg cggtccatgg cttcgggcga gatcgtcctc
     1141 gaaggcgccg aggcctatct ggtcggcgag gcggggcagg gcttcaagca gatgaccgac
     1201 atgatcaaca tgtcgcggct cgccaacggc gtacgcagcg ccgggctgat gcggcgctcg
     1261 gttgccgagg cgctgcacat ctcacggcac cgccgcgcct ttggcaaatc cctgatggac
     1321 atgccgctga tgcggcggca actggcaaag atgcttctgg ccgcggagca ggggcgcagc
     1381 atggtgttcc ataccgcgca ggtgctcgat gcggcggacc gcggcgatgc cgagaa
//
LOCUS       DTVW01000320            2691 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1406312, whole
            genome shotgun sequence.
ACCESSION   DTVW01000320 DTVW01000000
VERSION     DTVW01000320.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2691)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2691)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2691
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1406312"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(61..531)
                     /locus_tag="EYO87_04290"
     CDS             complement(61..531)
                     /locus_tag="EYO87_04290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008280663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein MmcB-related protein"
                     /protein_id="HIC65214.1"
                     /translation="MEYPTDANDLPALAGQRLARGVARLLRSMDHAALTEFVPARGLR
                     VDVISLAPGGDLWIVECKSSRADFASDRKWQGYLEWCDRYFWAVDHDFPVELLPPETG
                     LICADPYGAEIQRMAPETRLSGARRARMTRDFARAAALRLQNLADPRAAPSLIV"
     gene            complement(925..1863)
                     /locus_tag="EYO87_04295"
     CDS             complement(925..1863)
                     /locus_tag="EYO87_04295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018000455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF481 domain-containing protein"
                     /protein_id="HIC65215.1"
                     /translation="MKKVTLLTGTAAILAVLSVPAFAQTEIATGADAVGVSAIDEQIT
                     DIEDNVRDDFNRSADADRFGSSDRRQGLFGNMSLQYSGSTGNSEGQDLAIAGRVSYNQ
                     APFAQSVGLAIYFGEDDNGNKDQEDVDAIYDAQYYFNDRFYAFALGRLSVNGLVDGQR
                     NSAAQSDEDLNAEFNDLRRDAFLGFGPGYRILNTPDTTWRVQAGVGVRYTQTGAQSLG
                     FDENGNTVGDSSDTSVGYIASSRLYHRFNDMIFITNDTDYLGSKDANDVISNEFGVNF
                     KMSNQLATRVSYMTEYQENRDIRTNNTLGVAIVYGF"
     gene            complement(2519..>2691)
                     /locus_tag="EYO87_04300"
     CDS             complement(2519..>2691)
                     /locus_tag="EYO87_04300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002720941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HIC65216.1"
                     /translation="RAGGAELAGARTPPKVVITEYVRIAEAFFPDGREPKFVNGVLDH
                     MARDLRPDAFDG"
BASE COUNT          544 a          787 c          837 g          523 t
ORIGIN      
        1 ggcagggaat cacattacag ccaatctgga aatcctgaat cggacaggct gcgacacgct
       61 ctagacgatc aaggatggtg ccgcccgagg gtcggccaga ttttgcagcc gcagcgctgc
      121 cgcccgcgca aagtcgcgtg tcatccgcgc gcggcgcgca cccgaaagcc gggtttccgg
      181 ggccatgcgc tgaatctcgg cgccataggg gtcggcgcag atcaagccgg tttccggcgg
      241 cagcagttca accggaaaat catgatcgac agcccagaaa tagcgatcgc accattccag
      301 atagccctgc catttacggt ccgacgcgaa atcggcgcga ctgctcttgc attccacgat
      361 ccagagatcg ccccccggtg ccagcgagat cacatcgacg cgcaggcccc gcgcggggac
      421 gaattcggtc agcgccgcat gatccatgct gcgcagcaga cgcgccacgc cgcgcgcaag
      481 gcgctgaccg gccaatgccg gcagatcatt cgcatcagtc ggatattcca ttgccgcaga
      541 atagaacgaa agcaaaacat cgtgcaagcc ctgcggcctg ccgtaccgga agcttgaaac
      601 ggcggcgcgg cttgcctatc tgttcgtctt ggcgggcttc tgctcttccc gcgcgcggcc
      661 atttttccac tggcctataa cttttccgag ggggctggcc ctgtcgtgac cctggtcacg
      721 ttatccggcg cccacctggt actccaggct ttcgggaaat ctcgcgctgc cgcggttgct
      781 gcggttcccg ccacctcacg aaagaaccgc cctgccatcc ggcagcggcg gttttttcgt
      841 ggccggccgg gaccggttcc ggcaccaaga aagggcggcc tttcgaccgc cctgtccaga
      901 gagactttcg atccagggaa gggatcagaa gccgtagacg atcgcgacgc ccagggtatt
      961 gttcgtgcgg atgtcacgat tttcctggta ctcggtcatg tagctcacgc gggtcgccag
     1021 ctggttcgac atcttgaagt tgacgccgaa ttcgttgctg atcacgtcat tcgcatcctt
     1081 cgacccaaga tagtcggtgt cgttggtgat gaagatcatg tcgttgaagc ggtgatacag
     1141 ccgcgacgac gcgatgtagc cgaccgaggt atccgacgaa tcgccaaccg tgttgccgtt
     1201 ctcgtcaaag cccagggatt gcgcaccggt ctgggtgtag cggacgccga caccggcctg
     1261 gacgcgccag gtcgtatccg gcgtgttcag gatgcgatag cccggaccaa agcccaggaa
     1321 ggcgtcgcgg cgaaggtcat tgaactcggc attgagatct tcgtccgact gggcggcgct
     1381 gttgcgctgg ccatcgacaa gaccgttcac gctgagccgg cccaaggcga aggcatagaa
     1441 acgatcgttg aagtagtatt gcgcatcata gatcgcatcc acatcttcct gatccttgtt
     1501 gccgttgtcg tcttcgccga aatagatggc aaggccgacg ctttgcgcga agggagcctg
     1561 attatacgag acgcggccgg cgatggccaa atcctggcct tcggaattgc cggtcgagcc
     1621 gctgtattgc agcgacatgt tgccgaaaag gccttggcgg cgatcggacg aaccgaaccg
     1681 gtcggcatcg gccgagcggt tgaaatcatc gcggacgttg tcttcgatgt cggtgatctg
     1741 ttcgtcgatg gccgagacgc ccacggcatc ggcgccggtt gcaatttcag tctgggcgaa
     1801 agccggaacc gacaagacgg ccaggatcgc ggcggtgccg gtcagcagcg taactttttt
     1861 cataatgtgt tcctcacgag ctgagtttcg ttgtcctggc ctcgaagcga cgccagagca
     1921 tctctgctgg gtatcaatta tcgctgagcg ggtctggttc aaagacccgt ggaaaacatg
     1981 gtgaaatgtc gaaaacgtga gcaacggcac gacacggcgc tgtcggcgga aaaacgctga
     2041 catgaaatcg tgaattgaac ggatggaaca aaattctctt tctcggaaag tattggttaa
     2101 tatggctaaa ccgatttgag atcgaaaggg atcgtgataa tctgatcgct cgttttcaga
     2161 aatgcacacg ttactgcgca tgaaaaaggc aggcaagcct ggtccggcag cgcggcgtgt
     2221 tgttgcaaaa tcgacacgga agccacgggc gagcgcgatc ggtgaggcgc atttacatca
     2281 ccatcggccg tctgatggcg acgcatcgcc ggcgcgaggt gttcttcttt cggttgaagg
     2341 cgggggtggg ggcgccccac cgcacaggcg attcggccag aggcgggttc ctgcgatgcg
     2401 cgttcggtca ccgcgcggca ccggtatggc gagcctgcgg caaacgatcg gcctgcgact
     2461 tcggcaaatg ttgatgacgg gcgcggacaa gacgtgtggc aggccgcccg gcgtcacatc
     2521 atccgtcgaa tgcatccggg cgcagatcgc gcgccatgtg atccagcacc ccgttcacga
     2581 atttcggctc gcggccgtcg ggaaaaaagg cctcggcgat gcggacatat tcagtgatga
     2641 cgacttttgg cggggtcctg gcgcccgcaa gttcggcgcc acccgcgcga a
//
LOCUS       DTVW01000321            2060 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1407370, whole
            genome shotgun sequence.
ACCESSION   DTVW01000321 DTVW01000000
VERSION     DTVW01000321.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2060)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2060)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2060
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1407370"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1050)
                     /locus_tag="EYO87_04305"
     CDS             complement(<1..1050)
                     /locus_tag="EYO87_04305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CCA tRNA nucleotidyltransferase"
                     /protein_id="HIC65217.1"
                     /translation="MTRLPADILRDPALIAVLDAIEAGGHRALLVGGAVRNALLACPV
                     EDIDIATDASPDDVMRLVRAAGLKAVPTGIDHGTITVVSDTRGFEVTTFRHDLETDGR
                     HAVVAFSDDLAEDARRRDFTINALYAGRDGKVVDPVGGLPDLAARRLRFVGQAQARIR
                     EDYLRILRFFRFLAWYGRDANPEAVAACSALKDGLARIARERIGAEMKKLLAASDPAP
                     AMALMAETGVLARILPAATVDDLPALIAAEGPRPPSWRRRLACLADRNSADLLRLSRD
                     EARAQQVLRGALDAGWSLNEAGYRLGFRNLGNETDSDVSYDDPADAGRKDLTSVDTTT
                     SGYHQEALVPLSSETH"
     gene            complement(1047..1610)
                     /locus_tag="EYO87_04310"
     CDS             complement(1047..1610)
                     /locus_tag="EYO87_04310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA pyrophosphatase"
                     /protein_id="HIC65218.1"
                     /translation="MRRALSIPAGPSSDYDLNADPAPETALRPAGVLAAFHEDDGRIL
                     MTKRASGLRHHPGQIALPGGKVDPGDTDETAAALREAREEVGLDPAQIDLIGTLPPHR
                     TVTGFAMTAVLAVIRGPFTPIAEPGEVEEVFSLPFAHIADPAHYRIEGRRWRGGWRYY
                     YVAPYGPYYLWGATARVLLQLARRMAA"
     gene            complement(1634..>2060)
                     /locus_tag="EYO87_04315"
     CDS             complement(1634..>2060)
                     /locus_tag="EYO87_04315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Hsp33 family molecular chaperone HslO"
                     /protein_id="HIC65219.1"
                     /translation="GSGEGGLIEAADILQGGESEDWNRANLLLDTVETLELIGPRVGP
                     TDLLLRLFHEEAPRVFDAQRVEFGCSCTAGRVRDTLSIYSAKDIAHMTTDEGIVTADC
                     QFCGAHYEFDPNSLGFEATLDAEGNPIDPDDDAQNRAAE"
BASE COUNT          343 a          720 c          686 g          311 t
ORIGIN      
        1 atgcgtttct gaactgagcg gcaccagcgc ctcctggtga taaccgctag tggttgtatc
       61 aacagaggtc agatctttac gcccggcatc agcaggatcg tcataactga catcggagtc
      121 tgtttcattg cccagattcc ggaagcccag ccggtagccc gcctcgttca gcgaccaccc
      181 ggcatccagc gccccgcgca aaacctgctg tgccctggcc tcgtcgcgcg acaggcgcag
      241 cagatcggcg ctgttgcgat cagccaggca ggccagacgg cgccgccacg agggcgggcg
      301 cgggccttcg gcggcgatca gcgcaggcag gtcatcgacg gtcgcggcgg gcaggatccg
      361 cgccagaacg ccggtttcgg ccatcagcgc catcgcgggc gcgggatcgg acgcggccag
      421 cagctttttc atctcggccc cgatccgttc gcgcgcgatc cgcgccagac catccttcag
      481 cgcgctgcag gcggcgacgg cctcggggtt cgcgtcacgc ccataccagg ccaggaagcg
      541 gaaaaaccgc aggatgcgca ggtaatcctc gcggatccgg gcctgtgcct ggcccacgaa
      601 gcgcagccgc cgcgccgcca gatcgggcag gccgcccacc gggtcgacga ccttcccgtc
      661 gcggccggca taaagcgcgt tgatggtgaa atcacgccgc cgcgcatcct cggccagatc
      721 gtccgagaag gccacgaccg cgtggcggcc gtcggtttcg agatcgtggc gaaaggtcgt
      781 cacctcgaag ccgcgcgtgt ccgagaccac tgtgatcgtg ccatggtcga tcccggtcgg
      841 cacggccttc aacccggctg cccgcaccag ccgcatcacg tcgtcgggac tggcatccgt
      901 ggcgatgtcg atatcctcga ccggacaggc cagcagcgcg ttgcgcaccg ccccgccgac
      961 cagcagggcg cgatggccgc cggcctcgat ggcgtcaagc accgcgatca gcgccggatc
     1021 gcgcaggatg tcggcgggca ggcgggtcac gccgccatcc tgcgcgccag ttgcagcagc
     1081 acccgcgccg tcgcgcccca caggtaatag ggtccatagg gcgccacgta atagtatcgc
     1141 cagccgccgc gccagcgccg tccctcgatg cggtaatggg cggggtcggc gatatgggcg
     1201 aagggcagcg aaaagacctc ttcgacttcg ccgggctccg caatgggtgt gaaggggccg
     1261 cggatcacgg ccagcaccgc agtcatggca aatccggtca cggtccggtg cggcggaagc
     1321 gtgccgatca gatcgatctg cgcgggatca aggccgactt cctcgcgggc ctcgcgcagc
     1381 gcggccgcgg tctcgtcggt atcgccggga tcgaccttgc cgcccggcag cgcgatctgg
     1441 cccggatgat ggcgcaaccc cgatgcgcgc ttggtcatca ggatacgccc gtcatcctcg
     1501 tggaaggcag ccagaacgcc ggccggccgc aacgcggtct cgggggccgg atcggcgttc
     1561 aggtcatagt ccgaactggg ccccgccgga atcgacaggg cccgccgcag ccggtcctcg
     1621 gaccagccgc cggtcactcg gccgccctgt tctgagcatc gtcatcgggg tcgatgggat
     1681 tgccctcggc atccaacgtc gcctcgaaac ccagcgaatt cggatcgaat tcgtaatgcg
     1741 cgccgcagaa ctggcaatcg gcggtgacga tcccctcgtc ggtggtcatg tgcgcgatgt
     1801 ccttggccga atagatcgac agggtgtcgc gcacccggcc cgcggtgcag gagcagccga
     1861 attccaccct ctgcgcatcg aagacgcgcg gagcttcctc gtggaacagg cgcagaagca
     1921 ggtcggtcgg accgacgcgg ggaccgatca gttccagcgt ctcgaccgtg tccagcagca
     1981 ggttggcacg gttccaatcc tcggattcgc cgccctgcag gatgtcggcg gcctcgatca
     2041 gcccgccttc gccactgccg
//
LOCUS       DTVW01000322            1724 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1407545, whole
            genome shotgun sequence.
ACCESSION   DTVW01000322 DTVW01000000
VERSION     DTVW01000322.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1724)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1724)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1724
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1407545"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(165..944)
                     /locus_tag="EYO87_04320"
     CDS             complement(165..944)
                     /locus_tag="EYO87_04320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2030)-N(6))-methyltransferase
                     RlmJ"
                     /protein_id="HIC65220.1"
                     /translation="MLSYQHAYHAGNLADLHKHALIAAALDYLTRKDKPLSYLETHSG
                     RGLYHLDSDEARKTGEAEAGILRARQQGWLPPTHPLIAAIDATRRLHGTQAYPGSPLI
                     AAHFLRPGDSAHLAELHPVEHAALSRVAGFATLHRQDGFRMAQAVCPPAPRRGVLLVD
                     PSYEVKADYDTIPRQIAQIARKWNVGIIALWYPILTDDRHRAMLDTLMQAGPQALRTE
                     IRFAPARPGHGMVGSGMWVLNPPFGLDAEARRLEATFRARL"
     gene            complement(984..1202)
                     /locus_tag="EYO87_04325"
     CDS             complement(984..1202)
                     /locus_tag="EYO87_04325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_356899.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2945 domain-containing protein"
                     /protein_id="HIC65221.1"
                     /translation="MQKFREGTKVRWNWGQGHGTGKVTESFTEDVERRIKGQAIRRKA
                     SKDEPAYLIEQDDGDRVLKSHSELSGAD"
BASE COUNT          280 a          527 c          628 g          289 t
ORIGIN      
        1 cggcggcaaa agcgaaatag aggcccagcg agagggtcag cacgatgaag atcgtggcgc
       61 tgatcgaaag tctctgtgac atggcctgcc cggtgcctgt gcctgtttgg gtcttgttcc
      121 ggcgtgatca tgccacagcc ggatggaaag gggaatcccc gccatcacag ccgcgcgcgg
      181 aacgtggcct ccagtcggcg ggcctctgcg tcaaggccga agggcgggtt cagcacccac
      241 atccccgacc cgaccatgcc gtgtccgggg cgcgcgggcg caaagcgtat ttccgtccgc
      301 aatgcctgcg ggccggcctg catcagcgtg tccagcatcg cgcggtgccg gtcatcggtc
      361 aggatgggat accacagcgc gatgatgccg acattccatt tgcgtgcgat ctgcgcgatc
      421 tggcgcggga tggtgtcgta atccgccttc acttcgtagc tgggatcgac cagcagcacc
      481 ccgcgccgcg gcgcgggcgg acacacggcc tgcgccatcc ggaagccgtc ctgacgatgc
      541 agcgtggcga agcccgcgac acgcgacagc gctgcatgtt ccaccgggtg cagttcggcc
      601 aggtgggcgc tgtcgccggg gcgcaggaaa tgcgccgcga tgagcggaga gccgggatag
      661 gcctgtgtgc catgcaggcg gcgcgtggca tcgatcgcgg cgatcagcgg atgggttggc
      721 ggcagccagc cttgttgccg ggcccgcagg atcccggcct cggcctcgcc cgtcttacgg
      781 gcctcgtcgc tgtccagatg atagaggccg cgtccggaat gggtctccag ataggacagg
      841 ggcttgtcct tgcgcgtcag gtaatccagc gccgcggcaa tcagcgcgtg cttgtgcaga
      901 tcggccaggt ttccggcgtg ataggcgtgc tgatagctga gcatgacccg ccatagcgcg
      961 cccgcgcgcg ccgcgaaaga ggatcagtcg gccccggaca attccgaatg gcttttcagg
     1021 acgcgatcgc cgtcgtcctg ttcgatcagg taggcgggtt catccttact ggccttgcgc
     1081 ctgatggcct gacccttgat ccgacgctcg acatcctcgg taaagctttc cgtcaccttg
     1141 ccggtgccgt gaccctgtcc ccagttccag cggaccttcg tgccctcacg gaatttctgc
     1201 atcgtcgcct ccatcgcgat tccaggcgca atgcgcaggg cgggtggcgg ttccatcggc
     1261 tgaaaagaaa cgcggcggcg cccagggagg aggaaggggc gccgccgctc aacgctgacc
     1321 cagggaggag ggagggccgc gtatggggtg cggtgcaggc cagggaggag gagaggccga
     1381 caccgcttgc gatgcgggct cgggagggag gaggagtgag cccgtcgcat cggtttgccg
     1441 cagaacaagg cggctatggg gtgcggcgcg ggccagggag gagcgggcct tcgccgcgga
     1501 cggcagccgt gggaggagga atgggctgcc gtgtgcggtc gccacgatcg acgtggctat
     1561 gttctttggc ggcgacctcc ggggaggagg agaggaggtc gccgctgatc ccgacccagg
     1621 gaggaggaga gggccgggag ttcgaattcc ttacttcgct tcgccccagg ccgcttcgtg
     1681 ggccaggcgg gtgatcatcg accggttgat cccgaggtcg tcga
//
LOCUS       DTVW01000323            1018 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1408166, whole
            genome shotgun sequence.
ACCESSION   DTVW01000323 DTVW01000000
VERSION     DTVW01000323.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1018)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1018)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1018
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1408166"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..712)
                     /locus_tag="EYO87_04330"
     CDS             complement(<1..712)
                     /locus_tag="EYO87_04330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2793 domain-containing protein"
                     /protein_id="HIC65222.1"
                     /translation="MSDTTTHLGLPYLLAAQAQKHVTHNEALRLLDAMVQLSVLDRTR
                     TTPPASPADGDRHLVTSGATGIWAGWDLNIAFWVDGAWIRLVPRTGWLVWVAAESLFL
                     VWTGSAWEVLGEPRDVSDAVFSLVNDTDPTKKATFSLAGISTGTTRSFTLPNTSSELA
                     ILAGTQTFTGNKTFSGTLTASGTVTVSAASASIGTATTTATYGIGTGATTTGVTKTVN
                     IGTGGASGSTTVVNIGSTT"
     gene            complement(724..>1018)
                     /locus_tag="EYO87_04335"
     CDS             complement(724..>1018)
                     /locus_tag="EYO87_04335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011910625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65223.1"
                     /translation="DLTIRWTRRSRALVADAWEQVEVPLAEDMESYDVQILDGAAIKR
                     TLTSATTFVLYTDAQQSADWGAPLGPGQTLAIRIYQLSNRLGRGTPATVTLQF"
BASE COUNT          148 a          324 c          371 g          175 t
ORIGIN      
        1 ccgtggtcga gccgatgttc acgacggtgg tcgatccgga cgcgccgccg gtgccgatgt
       61 tcacggtctt tgtgacgcct gtcgtcgtgg ccccggtgcc aatcccgtag gtggcggtcg
      121 tcgttgccgt gccgattgag gcgctggctg cagacaccgt cacagtcccg gacgccgtca
      181 gcgtccccga gaaggtcttg ttgccggtga aagtctgcgt gcccgcgagg atcgccagtt
      241 cggacgaggt gttcggcagg gtgaagctgc gcgtggtgcc cgtgctgatc cccgccagcg
      301 agaaggtcgc cttcttcgtc ggatcggtgt cgttcaccag gctgaagacc gcgtccgaca
      361 cgtcgcgtgg ctcgccgagc acttcccagg cgctgccggt ccagacgagg aacaggctct
      421 cggccgcgac ccagaccagc cagccggtgc gcggcaccag cctgatccat gcgccgtcca
      481 cccagaaggc gatgttcagg tcccacccgg cccaaatgcc tgtggcaccg gaggtcacca
      541 ggtgccggtc gccgtctgcc gggctggcgg gtggcgtggt gcgcgtccga tcaaggacgg
      601 aaagctgcac catggcgtcg agcaggcgca gcgcctcgtt gtgggtgaca tgcttctgcg
      661 cctgcgccgc caggaggtaa ggcaggccca gatgggtggt ggtgtcggac atgggaaatc
      721 ccgtcagaac tggagggtca cggtcgcggg tgtgccgcgc ccgaggcggt tcgagagctg
      781 gtagatgcgg atcgccagcg tctggccagg cccaagcggc gcgccccaat cggcgctctg
      841 ctgggcgtcg gtgtagagga cgaaggtcgt ggcgctggtc agcgtgcgct tgatcgcagc
      901 gccgtcgagg atctggacgt cgtagctttc catgtcctcg gcgagcggca cctcgacctg
      961 ttcccaggca tcggcgacca gcgcgcggga ccgccgggtc cagcggatgg tcagatcg
//
LOCUS       DTVW01000324            1032 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1409301, whole
            genome shotgun sequence.
ACCESSION   DTVW01000324 DTVW01000000
VERSION     DTVW01000324.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1032)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1032)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1032
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1409301"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1032)
                     /locus_tag="EYO87_04340"
     CDS             complement(<1..>1032)
                     /locus_tag="EYO87_04340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011747004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DNA topoisomerase I"
                     /protein_id="HIC65224.1"
                     /translation="KLPGAKSAGRVQSVCLRLIVDREMEIEAFKAREYWSVHARLATP
                     GGQEYDAQLVSLAGSKLDRFDLPDAERAAMAVSAVTSRDLRVASVTAKPASRNPWPPF
                     MTSTLQQEASRKLGMGARACMSTAQRLYEAGLITYMRTDGIDMAPEAVMAARDAIKTK
                     FGEKYLPKSPRMYKNKAKNAQEAHECIRPTDMMLSPDRLKVSADDQRKLYDLIWKRTI
                     ASQMEAARMERTTAEIESPDGQVGLRATGQVMLFDGFLRVYDQGRDDDEGEDSARLPA
                     ITEGEAAKLVGKAFDAEFSKARDKGDDLPEAPQGQRAAPGLLVNDAASTAARQHFTQP
                     PPRYTEATLV"
BASE COUNT          140 a          335 c          353 g          204 t
ORIGIN      
        1 accagagtcg cctcggtata gcggggcggg ggctgggtga aatgctggcg ggcggcggtg
       61 ctggcggcgt cgttgaccag aaggccgggg gcggcgcgct ggccctgcgg cgcctcgggc
      121 agatcgtcgc ccttgtcccg cgccttcgag aactcggcat cgaacgcctt gccgaccagt
      181 ttcgcggcct cgccttcggt gatcgccggc aggcgggcgc tgtcttcgcc ctcgtcatcg
      241 tcgcggccct ggtcatagac gcgcagaaaa ccgtcgaaca gcatcacctg accggtcgcg
      301 cgcaggccga cctggccatc ggggctttcg atttcggctg tcgtgcgctc catcctggcg
      361 gcttccatct ggctggcgat ggtgcgcttc cagatcaggt catacagctt gcgctggtca
      421 tcggcgctga ccttcagtcg gtccggcgac agcatcatgt cggtcgggcg gatgcattca
      481 tgggcttcct gcgcgttctt ggccttgttc ttgtacatgc gcggcgattt cggcaggtat
      541 ttttcgccga acttggtctt gatcgcgtct cgggcagcca tcaccgcctc gggggccatg
      601 tcgatcccgt cggtccgcat ataggtgatc aaaccggcct cgtagagacg ctgcgccgtg
      661 gacatgcagg cccgcgcgcc catgcccagc ttgcggctgg cctcttgctg cagcgtcgag
      721 gtcatgaagg gcggccaggg attgcggctg gcgggcttgg cggtgacgct ggcgacacgc
      781 agatcgcggc tggtgaccgc gctgacggcc atcgcggccc tttcggcgtc gggcaggtcg
      841 aatcggtcca gcttcgagcc ggccagcgac acgagttgcg cgtcgtattc ctgtcccccc
      901 ggcgtcgcaa gacgggcatg gacggaccag tattcgcgcg ccttgaatgc ctctatctcc
      961 atctcgcgat cgacaatcag gcgcaggcag acggactgga cgcgacccgc cgatttcgcg
     1021 ccgggcagct tg
//
LOCUS       DTVW01000325            1766 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1410620, whole
            genome shotgun sequence.
ACCESSION   DTVW01000325 DTVW01000000
VERSION     DTVW01000325.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1766)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1766)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1766
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1410620"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1340)
                     /locus_tag="EYO87_04345"
     CDS             complement(<1..1340)
                     /locus_tag="EYO87_04345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008757132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3D-(3,5/4)-trihydroxycyclohexane-1,2-dione
                     acylhydrolase (decyclizing)"
                     /protein_id="HIC65225.1"
                     /translation="MTASNDTIRLTTAQAIIRWLSNQFIEIDGREMRVCGGGFGIFGH
                     GNVTCLGEALNRVHDQLPLYRGQNEQGMGFAAAGYAKQWLRQRFMFCTASAGPGTANL
                     LTAAGLAHANRLPILMLCGDTFITRLPDPVLQQMENFNDPTFGVNDAFKSVSRYWDRI
                     CHPAQVIQSLPAALATMLDPADCGPAFIGLPQDVQGWTYDYPARFFDRKVHRIRRQAP
                     DVAEIADAVAALKGAERPMIIAGGGVQYSRAVAELTAFAQAHRIPVVETIAGRANLVA
                     AHPLNIGPIGVTGSTSANAVAEAADVILAVGTRLQDFTTASWTAFAKDAKIVSINAAR
                     HDASKHMSLPVVGDARLALDALAETLDYTAPEGWVRFAQDERKKWDAYVAENVKPGNR
                     PNSYAQAIGVVNAHCDPRDRVVAAAGGLPAEVTANWRTLETGTVDVEFGFSCMG"
     gene            1459..>1766
                     /locus_tag="EYO87_04350"
     CDS             1459..>1766
                     /locus_tag="EYO87_04350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008236319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HIC65226.1"
                     /translation="MTQIGIGILGGGYMGKAHAVAMSAVGAIFDTTLRPRLEMVCASS
                     PDSAERYRAAYGFARATSDWKALVDDPGVEAIVIATPQETHRMISEAAFAQGKAVFCE
                     "
BASE COUNT          304 a          555 c          585 g          322 t
ORIGIN      
        1 taacccatgc aggaaaaacc gaactcgaca tccaccgtgc cggtctcgag ggtgcgccag
       61 ttcgcggtca cttcggccgg cagcccgccg gcggcggcca ccacccggtc tcgcggatcg
      121 caatgggcat tcacgacgcc gatggcctgg gcataggagt tgggccggtt gccgggtttg
      181 acgttctcgg caacgtaggc gtcccatttt ttccgttcgt cctgcgcgaa gcgcacccag
      241 ccttcggggg cggtgtaatc gagtgtctcg gcaagggcgt cgagcgccag cctggcatcg
      301 ccgaccaccg gcagggacat gtgcttgctt gcgtcgtggc gggcggcgtt gatcgaaacg
      361 atcttcgcgt ccttggcaaa ggcggtccag gaggcggttg taaagtcctg aagccgcgtg
      421 ccgacggcaa ggatcacgtc cgctgcctcg gccaccgcgt tggcgctggt cgatccggtc
      481 acgccgatcg gtccgatatt gagcggatgc gcggccacca gattggcgcg cccggcgatg
      541 gtctcgacca cggggatccg gtgcgcctgg gcaaacgcgg tcagttcggc cacggcgcgg
      601 gaatattgca ccccgccacc ggcgatgatc atcggccgtt cggccccctt cagcgccgcg
      661 acggcatcgg cgatttcggc gacgtcgggt gcctggcggc ggattcggtg caccttcctg
      721 tcgaagaacc tggccggata atcataggtc cagccctgca cgtcctgcgg caatccgata
      781 aaggccggtc cgcaatcggc gggatccagc atggtcgcaa gggccgcggg cagcgactgg
      841 atgacctgcg ccggatggca gatgcggtcc cagtagcggc tgaccgactt gaaggcgtcg
      901 tttaccccga aggtcgggtc gttgaaattc tccatctgct gaagcaccgg atcgggcagg
      961 cgggtgatga aggtatcccc gcagagcatc aggatcggca gccggttggc atgggcaagc
     1021 cctgccgcgg tcaagaggtt ggccgtgccc ggcccggccg aggcggtgca gaacatgaag
     1081 cgttggcgaa gccattgctt ggcataaccc gcggcggcaa agcccatccc ctgttcgttc
     1141 tgtccgcgat acagcggcaa ctggtcatgg acgcggttca gggcttcgcc caggcaggtg
     1201 acgtttccat gcccgaagat gccgaagccg ccgccgcaga cgcgcatttc ccgtccgtcg
     1261 atctcgatga actggttgga cagccagcgg atgatcgcct gggccgtggt cagccggatg
     1321 gtgtcgttgg acgcggtcat ctctgcgcga acccccgttg aatatttccg atcgctgacg
     1381 aaagcagctt gcgagttgtc gattctcacg atacgttttt tgcaaccggt tgcaatcaaa
     1441 atctggcagg aggacagctt gacccaaatc ggcatcggca ttctgggcgg cgggtatatg
     1501 ggcaaggcac atgccgtggc catgtccgcg gtcggcgcga tcttcgacac gaccctgcgg
     1561 ccccggctcg aaatggtctg cgcctcgtcc cccgacagcg cggaacgcta tcgcgccgcc
     1621 tacggctttg cccgcgccac ttcggattgg aaggccctgg tcgacgatcc cggcgtcgaa
     1681 gccatcgtca tcgccacgcc gcaagagacg catcgaatga tttccgaggc ggctttcgcg
     1741 cagggcaaag cggtcttctg cgaaaa
//
LOCUS       DTVW01000326            1190 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1410638, whole
            genome shotgun sequence.
ACCESSION   DTVW01000326 DTVW01000000
VERSION     DTVW01000326.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1190)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1190)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1190
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1410638"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>1190
                     /locus_tag="EYO87_04355"
     CDS             <1..>1190
                     /locus_tag="EYO87_04355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HIC65227.1"
                     /translation="AGIATQMVVERQMAQRQEPNRREIGRDAFVEKIWAWKQESGDTI
                     INQLQRLGASCDWSRNAFTMSGAPGAPDGEEGNFHDAVIRVFVDLYNKGIIYRGKRLV
                     NWDPHFETAISDLEVENREVPGHMWHFKYPLAGGETYEYVERDEDGNVTLRETRDYIS
                     IATTRPETMLGDGAVAVHPGDARYAPIVGKLCEIPVGPREHRRLIPIITDEYPDPDFG
                     SGAVKITGAHDFNDYGVATRNGIPLYALMDTKGAMREDGMPYADSAAIATRAAKGEDV
                     GDVSGVNLVPDHLRGLDRFEARRQVIDEITAEGLAVTDANGAPVIDSKPIMQPFGDRS
                     GVVIEPMLTDQWFVDTKRIVQPAIDAVRDGRTQILPEQHKKVYFNWLENIEPWTISRQ
                     LWWG"
BASE COUNT          237 a          386 c          390 g          177 t
ORIGIN      
        1 gccggcatcg ccacgcagat ggtggtggaa cgacagatgg cgcagcggca ggaaccgaac
       61 cgccgcgaga tcgggcgcga cgcctttgtc gagaagatct gggcgtggaa acaggaatcc
      121 ggggacacga tcatcaacca gttgcagcgt ctgggcgcct cctgcgactg gtcgcgcaac
      181 gcctttacca tgtccggcgc gccgggcgcg cccgacggcg aggagggcaa tttccacgac
      241 gcggtgatcc gggtcttcgt cgacctctac aacaagggca tcatctatcg cggcaagcga
      301 ctggtgaact gggacccgca tttcgaaacc gcgatcagcg atctggaggt cgagaaccgc
      361 gaggttcccg gccatatgtg gcatttcaaa tacccgctgg ccggcggcga gacctatgaa
      421 tacgtggagc gcgacgaaga cggcaacgtc accctgcgcg agacgcggga ctacatcagc
      481 atcgccacga cgcggcccga aaccatgctg ggcgacggcg cggtcgcggt ccatccgggc
      541 gacgcccgct atgccccgat cgtgggcaag ctgtgcgaga tcccggtcgg ccccagggaa
      601 catcgccggc tgatcccgat catcaccgat gaataccccg atcccgattt cggcagcggc
      661 gcggtcaaga tcaccggcgc gcatgatttc aacgattacg gcgtcgccac ccgcaacggc
      721 atcccgcttt acgcgctgat ggacacgaaa ggcgcgatgc gcgaggacgg gatgccctat
      781 gcggacagcg ccgccatcgc gacccgcgcc gcgaagggcg aggatgtggg cgacgtgtcg
      841 ggcgtcaatc tcgtccccga ccatctgcgc gggctggacc ggttcgaggc ccgccggcag
      901 gtcatcgacg agatcaccgc cgaggggctt gccgtcaccg atgccaacgg cgcgccggtg
      961 atcgacagca agccgatcat gcagcctttc ggcgaccgtt ccggcgtggt gatcgagccg
     1021 atgctgaccg atcagtggtt cgtggacacg aaacggatcg tccagcccgc catcgacgcc
     1081 gtacgcgacg ggcgcacgca gatcctgccc gagcagcaca agaaggtcta tttcaactgg
     1141 ctggaaaaca tcgagccctg gaccatcagt cgccagcttt ggtggggaca
//
LOCUS       DTVW01000327            2411 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1412143, whole
            genome shotgun sequence.
ACCESSION   DTVW01000327 DTVW01000000
VERSION     DTVW01000327.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2411)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2411)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2411
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1412143"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     regulatory      complement(105..203)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            272..2371
                     /gene="mutS"
                     /locus_tag="EYO87_04360"
                     /pseudo
     CDS             272..2371
                     /gene="mutS"
                     /locus_tag="EYO87_04360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011747167.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
BASE COUNT          380 a          813 c          832 g          386 t
ORIGIN      
        1 cggtcagcac gggcttgtcc tgcgcggcgg cgggggtcgc ggccagcagg gcgaggatca
       61 gggtcttctt catcgctgcc tcctttcaga cggggtttcg aaagaaaggg cagcgtcacc
      121 ttccctccgc cggtgttagc cggatcaggt tcaacgggtc cgcgcgtcgc gtctcagccg
      181 gtatggcccc ccgaggtggg tctgaatgta gtggttccac agcccggcgc aagcggatag
      241 aaccgccggc aaggacagac gaaggaccgg catgagcgat cagcccacac cgatgatggc
      301 gcagtatctg gcgatccggg acgccaatcc cggcgcgctt ctgttctatc gcatgggcga
      361 tttctacgag atgttcttcg acgacgccgt ggccgccgcc gccgccctgg acatcgcgct
      421 gacgaaacgc ggcacccatg agggccagcc catcccgatg tgcggggtgc cggtccatgc
      481 cgccgaaagc tatctgctga cgctgatccg caaggggttc cgcgtcgcca tcgccgaaca
      541 gatggaagat ccggccgagg ccaggaaacg ggggtccaag tcggtcgttg cccgcgacgt
      601 ggtgcggctg gtcacgcccg gtaccctgac cgaggaatcg ctgctggagg cacggcgcca
      661 caatttcctg gccgccttcg cgaccgtacg ccaggacagc gcactggcct gggtcgatat
      721 ctcgaccggc gcgtttcagg taatggaatg tccgctgccg cgcctcggac ccgaactggc
      781 caggcttgca ccgcgtgaaa ttctggcctg cgaaggtgcg ggcctcggcg atctggcggc
      841 ggaatcaggc gccgccctga ccgatcgtca cgccggcgcc ttcgacagcg gcgcgggtgc
      901 tcgtcggctc tgcgcgcttt acggggtcga gacgctggac ggattcggca ccttcgggcg
      961 cgcggaactg tcggcgatgg gggcgatcgt cgagtatctg gagatgacgc agaaaggcag
     1021 gttgccgctg ttgcgcccgc ctgcgcgcga acgccacggc gccgcgatgc agatcgacgc
     1081 ctcgacccgg cgcaatctgg aattgaccca ggccttgtcg ggcgggcgcg agggatcgct
     1141 gctggctgcc atcgaccgaa ccgtcacggc ggcgggggcg cggctgctgg aacgccgcat
     1201 cagcgccccc agccgcgatc tggcgctgat ccatgcgcgg cacgacgcgg tggcgcagat
     1261 ggtcgatgat ccgcgcctcg cgaccgatct gcgcgaggca ctggcccgtg tgcccgacat
     1321 ggaccgcgcc ctgtcccgtc tggcgctgga ccggggcgga ccgcgcgatc tggccgcgat
     1381 ccgtgccggc ctgacccagg gtgcccggat cgccgcgcgg ctgtccggcg atgtcgcgcc
     1441 gatcctgcgc gacgccgcac gcgatctggc cggacatgac gatttgatcc atcttctgga
     1501 acaggcattg gtggccgagc cgccgctgct gggtcgcgat ggcggtttcg tcgcgcccgg
     1561 tcacgacgcc gatctggacc agacccgccg cctgcgcgac gaggggcgcg gcgtgatcgc
     1621 cgggatgcag gccgattacg ccgccagggc cggggtgcaa agcctgaaga tcaggcacaa
     1681 caacgtgctg ggatatttca tcgagaccac caccacccat gccgaccgga tgctggcgat
     1741 ggcggacacc ttcatccacc gtcagaccac cgccaaccag atccgcttta ccacggtcga
     1801 gctttcggaa ctggagacgc gcatcctcaa cgcccgcgac cgcgcgctgg aaatcgagcg
     1861 cggcatcttc gatgggcttc gcgccgcggt gctggatcat gcgccgcgga tcgggcaggc
     1921 ggcgcgcgcg ctggccgaga tcgaccttgc cggcgccttc gccgatatcg cgacaggcga
     1981 gggctgggtg cgtccccgcg tcgatggcag ccgcgccttt cggatcgagg gcggccggca
     2041 ccctgtggtg gaacatgcgc tgaagcgcag ggcagaggga ttcgtcgcca atgactgcga
     2101 tctgaccgcc gccgagacgc ccgcgatctg gctgctgacc gggcccaaca tggccggcaa
     2161 atcgaccttc ctgcgccaga acgcgctgat cgccgtgctg gcgcaggccg gggccttcgt
     2221 gcccgcgcgc gatgcccata tcggcatggt cagccagctt ttcagtcgtg tgggcgccgc
     2281 cgacgatctg gcgcggggcc ggtccacctt cctggtcgaa atggtcgaga ccgccgcgat
     2341 tctcaatcag ggcgaatcgt acatggtcat cgccgtattc gccaaagcca attcccggtg
     2401 acacggccac c
//
LOCUS       DTVW01000328            1534 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1412217, whole
            genome shotgun sequence.
ACCESSION   DTVW01000328 DTVW01000000
VERSION     DTVW01000328.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1534)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1534)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1534
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1412217"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..353)
                     /locus_tag="EYO87_04365"
     CDS             complement(<1..353)
                     /locus_tag="EYO87_04365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_353227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyisobutyrate dehydrogenase"
                     /protein_id="HIC65228.1"
                     /translation="MKIGFIGLGNMGAPMAANLAEAGHEVVGYDTAAPEPAGVIAAAS
                     AAEAVRGAEVIITMLPNGAILRSVADQVIPAMQPGAVFCDCSTVDVDSARAVADQARA
                     AGLGALDAPVSGGIGG"
     gene            complement(350..1357)
                     /locus_tag="EYO87_04370"
     CDS             complement(350..1357)
                     /locus_tag="EYO87_04370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007119925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HIC65229.1"
                     /translation="MDDLNIRKRDHAGRITLTRPRALNALTHEMAVAIRTALEDWRDD
                     ADVDLIIIDAEGDRAFCAGGDIAAVYRAGLQGDHRTGREFFRDEYRMNAAIADYPKPV
                     VAFMQGFVMGGGVGVGGHAAHRIVGDTTRIAMPESGIGLIPDVGGSWLLGRAPGRIGE
                     YLALTGDRMGPGDAIHAGFADSYLPEAEWPSLIEDLERTGDATRIVGVAPPSAPLARR
                     DLSAFGERRVGDIAAALEKIGQEDALKPIRRNSPLSMAVGLALVRTSRGDRRMQDSLS
                     REYRFTYRATEESDFLEGVRAQIIDKDRDPKWAADASDAHVQALMAPLGDEELIWEEG
                     S"
     gene            complement(1362..>1534)
                     /locus_tag="EYO87_04375"
     CDS             complement(1362..>1534)
                     /locus_tag="EYO87_04375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008328362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
                     /protein_id="HIC65230.1"
                     /translation="AFEVANQCLQLHGGYGYLADYGIEKIVRDLRVHQILEGTNEIMR
                     LIVSRAMLAERG"
BASE COUNT          246 a          537 c          493 g          258 t
ORIGIN      
        1 ccgccgatcc cgccagagac cggcgcatcc agcgcgccca gtcccgcagc gcgggcctga
       61 tcggccaccg cgcgggcgct gtccacatcc accgtcgagc agtcgcagaa cactgcgccc
      121 ggctgcatgg cggggatgac ctgatcggcg acggatcgca ggatcgcacc atttggcagc
      181 atggtgatga tcacctccgc gccgcgcacg gcctcggctg cgctggcggc ggcgatgacg
      241 ccggccggtt cgggggcggc ggtgtcgtaa cccaccactt catgtccggc ctcggccaga
      301 ttggcggcca tcggcgcgcc catgttgccc agcccgatga atccgatttt catgatcctt
      361 cctcccagat cagttcctca tcccccagcg gcgccatcag cgcctggaca tgcgcatccg
      421 acgcatcggc ggcccatttc ggatcgcgat ccttgtcgat gatctgcgcg cgcacgccct
      481 ccagaaaatc gctttcctcg gtcgcgcgat aggtgaaccg gtattcgcgg ctcagcgaat
      541 cctgcatccg cctgtcgccg cgcgaggtcc gaaccagcgc caggccgacc gccatcgaca
      601 ggggagagtt gcggcggatc ggtttcagcg catcctcctg accgatcttt tccagggcgg
      661 ccgcgatgtc gccgacgcgg cgctcgccga aggccgacag gtcgcgacgg gccagggggg
      721 cagagggcgg cgccacgccc acgatccttg tcgcatcgcc ggtccgttcc agatcttcga
      781 tcagggaagg ccattccgcc tcgggcaggt agctgtcggc gaaacccgca tggatcgcgt
      841 caccggggcc catccggtcg ccggtcaggg ccagatattc gccgatcctt cccggtgcgc
      901 ggcccagaag ccaggagccg ccgacatcgg ggatcagccc gattccggat tcgggcatgg
      961 cgatccgggt cgtgtcgccc acgatccggt gggccgcatg gccgccgacg ccaacgccgc
     1021 cgcccatcac gaagccctgc atgaaggcga cgacaggttt gggataatcc gcaatggcgg
     1081 cattcatccg gtattcgtcg cggaaaaact cgcggcccgt ccggtgatcg ccttgcaggc
     1141 cggcgcgata gaccgcggcg atgtcgccgc cggcgcagaa ggcgcgatcg ccttcggcat
     1201 cgatgatgat cagatcgacg tccgcgtcgt cgcgccagtc ttccagagcg gtgcggatcg
     1261 ccaccgccat ctcgtgggtc agcgcgttca gcgcccgcgg ccgggtcaag gtgatccggc
     1321 cggcgtggtc gcgtttgcgg atgttcagat cgtccaaagc cttacccccg ttcggccagc
     1381 atggcacgtg agacgatcag tcgcatgatc tcgttggtgc cttcaaggat ctggtgcacc
     1441 cgcagatcgc gcacgatctt ctcgatcccg taatcggcca gatagccgta gccgccatgc
     1501 agttgcaggc attgattggc cacctcgaag gcgc
//
LOCUS       DTVW01000329            1644 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1412313, whole
            genome shotgun sequence.
ACCESSION   DTVW01000329 DTVW01000000
VERSION     DTVW01000329.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1644)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1644)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1644
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1412313"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..199)
                     /locus_tag="EYO87_04380"
     CDS             complement(<1..199)
                     /locus_tag="EYO87_04380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018229418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="selenide, water dikinase SelD"
                     /protein_id="HIC65231.1"
                     /translation="MDDQSPTEPRLTSLSHGGGCGCKIAPGVLTGLLRGTAMLPVPDE
                     LLVGIETSDDAAVYRLNDQQAL"
     gene            316..1077
                     /gene="hisF"
                     /locus_tag="EYO87_04385"
     CDS             316..1077
                     /gene="hisF"
                     /locus_tag="EYO87_04385"
                     /EC_number="4.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008032096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisF"
                     /protein_id="HIC65232.1"
                     /translation="MLKTRIIPCLDVADGRVVKGVNFVDLIDAGDPVAAARAYDAAGA
                     DEICFLDIHATHENRGTMFDLVTRTAEQCFVPLTVGGGVRTAEDVRALLLAGADKVSF
                     NSAAVADPDVIARAADRFGSQCVICAIDAKTVAGGGWEIFTHGGRRPTGIDAVAFART
                     VAERGAGEILLTSMDRDGTRAGFNLALTRAIADAVQIPVIASGGVGTLDHLVEGVTQG
                     HASAVLAASIFHFGTYSITEAKAHMAAAGIPMRLT"
     gene            1074..1388
                     /locus_tag="EYO87_04390"
     CDS             1074..1388
                     /locus_tag="EYO87_04390"
                     /EC_number="3.6.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017927081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyl-ATP diphosphatase"
                     /protein_id="HIC65233.1"
                     /translation="MSAIDRLAATIATRRWADPESSWTAKLLAGGPEKCAEKFGEEAV
                     EAVIEAVRGDRARLTAEAADVIFHLLVMLAARDVALADVEAELARREGLSGLAEKAAR
                     GD"
BASE COUNT          281 a          541 c          563 g          259 t
ORIGIN      
        1 ccagtgcctg ctgatcgttc agccgataga ccgcggcatc gtcggatgtc tcgatgccca
       61 ccagcagctc gtccgggacc ggcagcatcg cggttccgcg caacaggccg gtcagcacgc
      121 cgggcgcgat cttgcacccg cagccgccgc catgggacag cgaggtcagg cgcggttcgg
      181 tcgggctttg gtcgtccatc ggagcctccg gaattttggt gaagactagc accgcctccg
      241 gtcggcggca atcgaacgcc tctggcccgc gccgccgttt ccgcctatca ggggcgccac
      301 gaacgaggat cggccatgct gaagacccgc atcattccct gcctcgacgt ggccgatggc
      361 cgcgtggtca agggcgtcaa cttcgtcgat ctgatcgatg cgggcgatcc ggtcgcggcg
      421 gcgcgcgcct atgacgcggc gggcgcggac gagatctgct ttctggacat ccacgccact
      481 cacgagaacc gcggcaccat gttcgatctt gtcacgcgca cggccgaaca atgtttcgtg
      541 ccgctgacgg tgggcggcgg tgtgcgcaca gccgaggacg tgcgcgccct gttgctggcg
      601 ggcgcggaca aggtcagctt caactccgcc gccgtcgccg atcccgacgt gatcgcgcgg
      661 gccgccgacc ggttcggcag ccaatgcgtg atctgcgcca tcgacgccaa gaccgtcgcc
      721 ggcggcggtt gggagatttt cacccatggc gggcgcaggc cgaccggaat cgacgcggtc
      781 gccttcgcgc ggaccgtcgc cgaacgcggc gccggggaaa tcctgctgac ctcgatggac
      841 cgcgacggca cgcgcgctgg cttcaacctg gcgctgaccc gtgccatcgc cgatgcggtg
      901 cagataccgg tcatcgcatc gggcggggtc ggcaccctgg atcacctggt cgagggcgtg
      961 acccagggcc atgccagcgc cgtcctggcc gcctcgatct tccatttcgg cacctattcc
     1021 ataaccgagg ccaaggccca catggccgca gccggcattc cgatgagact gacatgagcg
     1081 ccatcgacag acttgccgcc accatcgcga cgcgccgatg ggccgatccg gaaagcagct
     1141 ggacggcgaa actgctggcc ggggggccgg aaaaatgcgc cgagaaattc ggcgaagagg
     1201 ccgtcgaggc ggtcatcgaa gcggttcgcg gcgaccgcgc ccggctgacc gcggaggccg
     1261 ctgacgtgat cttccatctg ctggtcatgc tggccgcgcg cgatgtggcg ctggccgatg
     1321 tcgaggcgga actggcgcgg cgcgaaggcc tgtcgggcct tgcggaaaaa gccgcgcggg
     1381 gcgactgaag gcgggatcaa ggcgcggcaa gacagggttc tggcgcgaat cccttcccct
     1441 cgggcaggct tgggggctat aagcggcgaa accgccgcga caggcaggca gacggcagtg
     1501 aaaacatgac agaggatggc atgagcgacg attcgatgaa cggcaagcat cacgaaggga
     1561 agtcccggtt caaattcatg tcgtgggcca tgtagacttt cttcttgccg ccctcgccca
     1621 ggaatcgctt gatctggtac ccgc
//
LOCUS       DTVW01000330            1524 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1412413, whole
            genome shotgun sequence.
ACCESSION   DTVW01000330 DTVW01000000
VERSION     DTVW01000330.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1524)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1524)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1524
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1412413"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..791
                     /gene="nadE"
                     /locus_tag="EYO87_04395"
     CDS             <1..791
                     /gene="nadE"
                     /locus_tag="EYO87_04395"
                     /EC_number="6.3.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="NAD(+) synthase"
                     /protein_id="HIC65234.1"
                     /translation="KKSVVRISHALPDAMIGIGPENVRCVMLPSQYTSQASLDDAADC
                     ARRLGTRLDTVHIEGARDAVTDALAHLMAGTAPDTTEENIQSRLRGVMLMAISNKFNE
                     MLLTTGNKSEVAVGYATIYGDMAGGYNPIKDLYKTRVFETCRWRNANHRDWMMGPEGE
                     VIPPQIIDKPPSAELRPDQKDQDSLPPYEVLDAILEGLVEKDLALKDLVARGFDAETV
                     RKVETLLYVSEWKRYQAAPGPRISTRAFWLDRRYPLVNRWRDEV"
     gene            complement(1026..>1524)
                     /locus_tag="EYO87_04400"
     CDS             complement(1026..>1524)
                     /locus_tag="EYO87_04400"
                     /EC_number="1.1.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008886793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glucose 1-dehydrogenase"
                     /protein_id="HIC65235.1"
                     /translation="VNNAGVTHLPTPMEEVSEADFDRVLAINCKSIYLIARKIVPLMK
                     QAGRGAIVNVASTAGVSPRPKLSWYNASKGWLITATRAMAVELAPFGIRVNALNPVAG
                     ETPLLKSFMGEDTPEMRAKFLSTIPLGRFSTPEDLGNAACFLASDEASMITGVAMEVD
                     GGRCI"
BASE COUNT          303 a          492 c          481 g          248 t
ORIGIN      
        1 acaagaagag cgtggtgagg atatcccacg ccctgcctga tgcaatgatc ggtatcgggc
       61 cggaaaacgt ccgctgcgtg atgctgccat cgcaatacac ctcgcaggcc agcctggatg
      121 atgccgccga ttgtgcacgg cgtctgggca cgcggctcga taccgtccat atcgaagggg
      181 cccgcgacgc ggtgaccgat gcgctggccc atctgatggc cggcaccgcg cccgacacca
      241 ccgaggaaaa catccagtcc cgcctgcggg gcgtgatgct gatggcgatc agcaacaagt
      301 tcaacgagat gctgctgacc acgggcaaca agtccgaggt cgcggtcggc tacgccacga
      361 tctacggtga catggccggc ggctataacc cgatcaagga tctctacaag acccgcgtgt
      421 tcgagacctg ccgctggcgc aacgccaatc accgcgactg gatgatgggt ccggagggcg
      481 aggtgattcc gccgcagatc atcgacaagc ctccctcggc ggagctgcgc cccgaccaga
      541 aggatcagga ttcgctgccg ccctacgagg tgctggacgc gatcctcgaa gggctggtcg
      601 aaaaggatct ggccctgaag gatctggtcg cccggggctt tgacgccgaa accgtcagga
      661 aggtggaaac gctgctctat gtcagcgaat ggaaacgcta tcaggccgcg cccggcccgc
      721 gtatctcgac cagggccttc tggctggacc ggcgctatcc gctggtcaac cgctggcgcg
      781 acgaggtgta gacaaaaaag ggggctccgc ccccgtccct tcaggactcc ccggggatat
      841 ttcacgacca aggcaaaatg gaaaacgcct catccgcgcg ggatgaggcg cctgcttcgg
      901 gggcggtcat cggcatcccc gcccgaaccg caagacaatt catatgctgc cagggtcggg
      961 gaaaggcgaa ccgcctgctt tgaacggcga ataacccgcc ggggtgcaaa acgccggccg
     1021 cgccatcaga tgcaacggcc gccatccacc tccatcgcga cgccggtgat catcgaggcc
     1081 tcgtccgagg ccaggaaaca ggcggcgttg cccagatcct cgggtgtcga gaagcggccc
     1141 agcgggatcg tggacaggaa tttagcccgc atctcgggcg tgtcctcgcc catgaaactt
     1201 ttcagcagcg gcgtttcgcc cgcgaccggg ttcagcgcgt tcacccggat gccgaaaggg
     1261 gccagttcca ccgccatggc gcgggttgcg gtgatcagcc agcctttcga ggcattgtac
     1321 cagctcagtt tcggccgcgg cgaaaccccc gcggtcgagg ccacgttcac gatggcgccc
     1381 cgcccggcct gcttcatcag cggcacgatc ttgcgcgcga tcagatagat cgacttgcag
     1441 ttgatcgcca gaacccggtc gaaatcggct tcggaaacct cttccatcgg ggtaggcaga
     1501 tgggtgacgc cggcattgtt cacc
//
LOCUS       DTVW01000331            2551 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1416062, whole
            genome shotgun sequence.
ACCESSION   DTVW01000331 DTVW01000000
VERSION     DTVW01000331.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2551)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2551)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2551
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1416062"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            634..855
                     /locus_tag="EYO87_04405"
     CDS             634..855
                     /locus_tag="EYO87_04405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65236.1"
                     /translation="MAQELDSIVEALAQARLNLNTAVEGMTSGAAASKLSDSQLSRLK
                     ALSDQNTGCQNSGCGGAEAALRDKSGIAK"
     gene            960..2321
                     /locus_tag="EYO87_04410"
     CDS             960..2321
                     /locus_tag="EYO87_04410"
                     /inference="COORDINATES: protein
                     motif:HMM:PF04055.19,HMM:TIGR04085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HIC65237.1"
                     /translation="MQKLSRYVIASPVFAEGEENRHVLFSTRTGQIFEVPQAIWTVLR
                     EGGFDKLNSDVLTQLSEAEILVPEAEAELSTILDRNRDGIRVNPHLNYVIQPTAHCQL
                     GCGYCGQTHERTNLSRANEADILRDVEARLDRGPFAELNLCWFGAEPLSGIQQMRSLT
                     PQLRSLCQERGVEYRASIITNGLAMSRKIGADLVGPLGVVSVTVSLDGTAPHHDRRRH
                     TKSGKPTFDRILANLVQLVATTQDAPIEIKVRCNVDRENASDVVPLLRRLRDEGLERA
                     VQFYTAPIHSWGNDAQRRSLEPADYAERELSWFVEMKRMGFSVPLVPKRQPVVCLAVQ
                     PDAALVDAHGTLFNCTEVSYVPSYGTPNRFAIGDLTTGERQAEVRDILGSFNDQVEAG
                     AFGCSRCPLLPVCGGACPKEWIEGRAPCPSSKRNIAQRLLLAAAFERMDRAAGDPSLP
                     AVA"
     gene            2340..>2551
                     /locus_tag="EYO87_04415"
     CDS             2340..>2551
                     /locus_tag="EYO87_04415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65238.1"
                     /translation="MRLLRDRIHLQPDGVLTLTGAGPVMLHGGAIREMVETLLSDGID
                     AARGDSTASFRELIDFLETAGLTGLA"
BASE COUNT          493 a          773 c          788 g          497 t
ORIGIN      
        1 tagaaaaggc ctgggatgtt tacaagttcc ttggcttccg atggtctcgt gaggttccta
       61 cacgaacctg ggtaggatag ctttccctgg tttttgaggg gcggctcacc agcccgcccg
      121 gcggccgatg tgccggtatg agggcggcgt cgatctcggt cttggccaga gccccgacac
      181 cctccggatt tgcgggaaat ccgcgcccac cgccctgcct gccgattccc ggatcgccgc
      241 aagctggaaa ttccggcccc tgtcacggcg gcgcggctgc tgccaccacc ggaagcaacc
      301 ttgcgatcgg ggcggtttat cctgtcgcgc tgcggaatca acccgaccga aggtgacccg
      361 tggcttcggc gattgcgtga ttcctggcaa gcagatagtg aacaccattg gcattccgaa
      421 aattattcaa ttatccaatg caatttatta tttgcgtcct gtcaatatat aaattcctgg
      481 ctaatttaat atgtattgac gaacagataa taatatagat aatcattgaa gcctgcttaa
      541 aaatcaggct ggaaagcaaa agaaaaagtc tcgcgccacg gatattcaaa ggatgctggg
      601 cgcggttctt cactcgtatc aaaggtgcgt agaatggctc aagaactcga ttccatcgtc
      661 gaagcccttg cccaggcaag gctcaatctg aataccgctg tagaaggcat gaccagtggc
      721 gcggctgcct cgaaactgtc cgattcgcag ctcagccggc tgaaggcgct gtccgaccag
      781 aacaccggct gccagaacag cggctgcggc ggtgccgaag cggcccttcg cgacaagtcg
      841 ggcatcgcga aataagacca ttgcggtctt gcgtcggcgg atacgcttgc gatccgccgg
      901 ccatccgatg tcatcacgcg ctggctgccc cgaaactcat tttccagagg catgggatca
      961 tgcagaaact ctccagatat gtcattgcgt cgccggtttt cgcggaagga gaggaaaatc
     1021 gtcatgtcct cttctcgacc cggacggggc agatcttcga agtgccgcag gccatatgga
     1081 cggtcttgcg cgaaggcgga ttcgacaagc tgaacagcga tgtcctgacc cagctttccg
     1141 aggccgaaat cctggtgccc gaggccgagg cagaattatc caccattctg gaccggaacc
     1201 gggacgggat ccgggtcaat ccgcatctga attatgtcat tcagccgacg gcacattgtc
     1261 agttgggctg cggttattgc ggtcagaccc acgagcgcac aaatctgagc cgcgcgaacg
     1321 aggccgatat cctgcgcgat gtcgaggcgc ggctggaccg cggtcctttc gccgagctca
     1381 acctgtgctg gttcggcgca gagcccttgt cgggcattca gcagatgcgt tcgctgacgc
     1441 cgcagttgcg cagcctgtgt caggaacgtg gcgtcgaata tcgcgccagc atcatcacga
     1501 acgggctggc catgtcgcgg aagatcggtg ccgatctggt cgggccgctc ggggtcgtct
     1561 cggtcactgt ctcgctggac gggacagccc cgcatcacga ccggcggcgc cacacgaaat
     1621 ccggcaagcc gaccttcgat cggatcctcg ccaatctggt tcagcttgtg gcgacgaccc
     1681 aggatgcgcc gatcgagatc aaggtgcgct gcaatgtcga tcgggaaaac gcctcggacg
     1741 tggtgccgct gctgcgacga ctgcgcgacg agggactgga gcgcgcggtt cagttctaca
     1801 ccgcccccat ccattcctgg ggcaatgacg cacagcgccg cagcctggag cccgcagact
     1861 acgccgaacg ggaattatcc tggtttgtcg agatgaagcg gatgggcttt tccgtgccac
     1921 tggttcccaa acggcagccc gtggtctgtc ttgcggtgca gcccgacgcg gcgctggtcg
     1981 atgcgcatgg cacgctgttc aactgcaccg aggtctctta cgtgcccagc tatggcacgc
     2041 cgaaccgctt tgccatcggc gatctgacca cgggcgagcg gcaggccgag gtgcgcgaca
     2101 ttctcggcag tttcaacgat caggtcgagg ccggcgcctt cggatgcagc cgctgtcccc
     2161 tgctgcccgt ctgcggcggc gcctgcccga aggaatggat cgagggccgg gcgccctgcc
     2221 ccagctcgaa acggaacatc gcccagagat tgcttctggc cgctgccttc gagcgaatgg
     2281 acagggccgc cggtgatccg tccctgcccg ctgtggcctg agaccggggc gcggcgatca
     2341 tgcgcctgct gcgggaccgg attcaccttc agccggacgg tgtgttgacc ctgaccggcg
     2401 ccggccccgt catgctgcac ggcggggcga tccgggaaat ggtcgaaacg ctgctgtcgg
     2461 acggaatcga tgccgcgagg ggcgactcaa cggcctcgtt ccgcgagctg atcgactttc
     2521 tcgagactgc gggtctgacc gggctggcag a
//
LOCUS       DTVW01000332            3858 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1416596, whole
            genome shotgun sequence.
ACCESSION   DTVW01000332 DTVW01000000
VERSION     DTVW01000332.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3858)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3858)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3858
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1416596"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(141..941)
                     /locus_tag="EYO87_04420"
     CDS             complement(141..941)
                     /locus_tag="EYO87_04420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019873359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HIC65239.1"
                     /translation="MRRGLAAIKSCKSVSLGLEIRHGWGPMAPLRAPTQHFMRRDGGD
                     YCTGAKTEKGRFGFSDDVIMLSTHGTTHIDALCHVFCDGMMFGDIPASEVSSSGAGKL
                     GAETIPPIATRAIIVDAVTDGRDWLDAGEEVHAADLRDRIRNAGLALEPGDALLVRTG
                     SLRAFQNGVVQDRSWPGLSADCIDWLRTEKVAVVGADNLAVEVNPSKVEGLATPLHQT
                     LMREDGVMLVELLDLEVFAGRTLEGFLTINPLRIVGGTASPVNPVLML"
     gene            1188..1991
                     /locus_tag="EYO87_04425"
     CDS             1188..1991
                     /locus_tag="EYO87_04425"
                     /inference="COORDINATES: protein motif:HMM:PF00378.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65240.1"
                     /translation="MSEPVASGDVVVRESRGPCAILRINRPEQRNALSNEVIAKLRAG
                     IAEIRDDPAVRVLVLAGAGEYAFCAGGDLRQMGDKVPDAFDSHLGRSQLASLFRDLWG
                     CGKPTIARVQGYAFAGGFGLAAACDFIVASEKAKFCIPEINIGLWPYMISVPLLHSMS
                     PKQALRLMMTGDRVSAEEGYRLGFVTEVTPHEELDARLEAFAAKLAKASPQAMTLGKR
                     AFYTVLNNDIDAKLGMLEALLTVSLGMPDAEEGLAAFAEKRKPVWGADR"
     gene            1927..2970
                     /locus_tag="EYO87_04430"
     CDS             1927..2970
                     /locus_tag="EYO87_04430"
                     /inference="COORDINATES: protein motif:HMM:PF00682.17"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylglutaryl-CoA lyase"
                     /protein_id="HIC65241.1"
                     /translation="MRKRGWPRLPKSASPSGVRTADMTEDRAATAWSLSGLGKVTLCE
                     CWLRDGIQGWPDVIPTDRKIAVLEAMIDAGVAEADVTSFVSRRLVPQMADGEDLLFAI
                     GERLRTRVLTVTVEGARRVADAHRTSGRIDRCGIPFSVSEAHNLANLRRTHADNRQVL
                     PEIFAILRDAGIEPLLGVVTAFGCPIRGRVAQQEALDVAAWGVDHGIRSLMFGDTTGM
                     ANPGAAFAMFSAATGLWPEVELIAHFHDNRGCGIANSLAALAGGAQTVDGSFGGCGGE
                     PKGVQQNVVGDQGNTASEDLLAVLDELGVQTGIDTERFLAAGLLAEQALGTALFSRVQ
                     RSGLAAHVGQERH"
     gene            2970..3728
                     /locus_tag="EYO87_04435"
     CDS             2970..3728
                     /locus_tag="EYO87_04435"
                     /inference="COORDINATES: protein motif:HMM:PF00378.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HIC65242.1"
                     /translation="MGQVHLDIDGAVAVITLDNPAHHNAVDAPMRDGLARAYDQIEAD
                     DALRVAIIRGAGTGSFCAGGSIDGYLEAGVFGPGAAHLPRIPRPSASRKPYIAAMCGH
                     ALGGGFSLALTCDIRVAGRGASMGPTGLKMGAVQGAETITRLTRLIGQSRATDVLLQS
                     RRLSGEEAGAIGLVQHVIDDDAVMQTARHIAGRIAGFSPWTVQMTKELVSRTLDLTLE
                     ASIAREDAVASEGYGRPDALEGFRAFKEKRKPRF"
     gene            3728..>3858
                     /locus_tag="EYO87_04440"
     CDS             3728..>3858
                     /locus_tag="EYO87_04440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013285325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HIC65243.1"
                     /translation="MAQPGTVRPLDGIRVVHLASLGPGPYAAMLLADMGAEVVIADRT
                     "
BASE COUNT          648 a         1204 c         1325 g          681 t
ORIGIN      
        1 atacatggag ccggccacgc ccggcgagcc gttcaagatc tgaacacgca caggaattgg
       61 cggccccgca gagcggggcc gttttgcttt ggcgctacgt cagaggtcag gcgtcggctc
      121 cagtccggcg agtgccggga tcagagcatg aggactgggt tcaccgggct ggccgtgccg
      181 cccacgatcc gcaggggatt gatcgtcagg aagccctcca gcgtcctgcc ggcaaagacc
      241 tcgaggtcca gaagctcgac cagcatcacg ccgtcctcgc gcatcagggt ctgatgcagg
      301 ggcgtggcca gtccttcgac cttggacggg ttgacctcga ccgcgaggtt gtccgcgccg
      361 acaaccgcca ccttttcggt gcgcagccag tcgatgcagt cggccgagag ccctggccag
      421 gaccgatcct ggacgacgcc gttctggaag gcacggagcg atccggtgcg gaccagcaga
      481 gcgtcacccg gttccagggc cagcccggca ttccggatgc ggtcgcgcag gtcggcggca
      541 tggacctctt cgccggcgtc cagccagtcg cgcccgtcgg tgacggcatc cacgattatg
      601 gcccgtgtcg cgattggcgg gattgtctcc gctcccagtt tgccggcccc ggagctgctc
      661 acttccgagg cgggaatgtc gccgaacatc atgccgtcgc agaacacgtg gcacagggcg
      721 tcaatgtggg tcgtgccgtg cgtggacagc atgatcacgt cgtccgaaaa tccgaatcgg
      781 cccttctcgg tcttggcacc agtgcagtag tcgccgccgt cccgccgcat gaaatgttgc
      841 gtgggggcac gcagcggggc catggggccc cagccgtgcc ggatctccag ccccagtgag
      901 acactcttgc aagacttgat cgccgcaagc ccgcgacgca ccgcggcctc gtcgatgtaa
      961 cggagcgcac cttcggatgt ggtcggatat gagtctgtcg tcttcacgtt tcggacgcct
     1021 tctctggatc aggggtctac cctgtattgg gaaccgatcc atccggcttg cgatgccggg
     1081 gctggacttg ccccccacaa tagtccggat acaaatttat tgtaaacaca tgtgttgacg
     1141 atttgcgggc cgttctctaa aaccgtggcg atatcgagga ggatgaaatg tcggaaccgg
     1201 tcgcatctgg cgacgtcgtc gtgcgggaaa gtcgtggtcc ttgcgctatc ctgcgcatca
     1261 accgtcccga acaacgcaat gcgctgtcga acgaggtcat tgcaaaattg cgcgccggaa
     1321 tcgccgagat ccgcgacgac cctgcggtcc gcgttctcgt gctggccggt gcgggcgagt
     1381 atgcattctg cgccggtggc gatcttcggc agatgggcga caaggtccct gacgcctttg
     1441 actcccatct cggcagaagt cagcttgcat ctctcttccg cgatctctgg gggtgcggca
     1501 agccgaccat cgcccgcgtg caagggtatg cctttgcggg tgggttcggc cttgcggcag
     1561 cctgcgactt catcgtcgcg tctgaaaagg ccaagttctg catcccggag atcaacatcg
     1621 ggctatggcc ttacatgatc tcagtgccgc tgctgcacag catgtccccg aaacaggcgc
     1681 tgcgcctgat gatgaccggc gacagggtgt ccgcagaaga aggctataga ctgggcttcg
     1741 tgaccgaggt cacgccccac gaagaacttg acgcacggct ggaggccttt gccgcgaagc
     1801 tcgcgaaggc gtctccgcag gcgatgacgc ttggcaagcg ggcgttctat acggtgctga
     1861 acaacgacat cgacgccaag ctggggatgc tggaggcgct gctgaccgtc agcctgggca
     1921 tgccggatgc ggaagagggg ctggccgcgt ttgccgaaaa gcgcaagccc gtctggggtg
     1981 cggaccgctg acatgacaga ggaccgggcc gccactgcct ggagtttgtc aggtctcggc
     2041 aaggtcacgc tgtgcgaatg ctggctgcgc gacggcatcc agggatggcc ggatgtcatt
     2101 ccgaccgacc gcaagatcgc ggtgctggag gcgatgatcg atgccggcgt tgcagaggcc
     2161 gacgttacat ccttcgtgtc gcggcgcctc gtgccgcaga tggcggatgg cgaagacctg
     2221 ctctttgcta ttggcgaacg gctcagaacc cgtgtcctga ccgtcaccgt ggagggggcg
     2281 cggcgcgttg cggacgcaca ccggacgtcg ggacggatcg accgctgcgg catcccgttc
     2341 tcggtcagtg aggcgcacaa ccttgctaac ctgcgccgca cgcatgctga caacaggcag
     2401 gtgcttcccg agatcttcgc gatcctgcgc gacgccggaa tcgagcccct tcttggagtc
     2461 gtgaccgcgt tcggatgtcc catccgcgga cgcgtcgcgc agcaggaggc gctggacgtc
     2521 gcggcctggg gcgtcgatca tggcatccgc tcgctgatgt tcggcgacac cacgggcatg
     2581 gccaatccgg gcgctgcctt cgccatgttc tcggccgcga ctggactgtg gccggaggtc
     2641 gagctaatcg cgcattttca cgacaaccgg ggctgcggca tcgccaattc gctggccgcg
     2701 ctggcgggcg gggcgcagac agtcgacggg tctttcggcg gctgtggcgg cgagccgaag
     2761 ggcgtccagc agaacgttgt gggagaccaa gggaacacgg caagtgagga ccttctcgca
     2821 gtgttggacg agctgggggt gcagaccggc atcgacacgg agcgcttcct tgctgcgggc
     2881 ctattggccg agcaggccct cgggacagcg ctgttcagcc gggtccagcg atccggactg
     2941 gcggcgcatg tgggacagga aaggcactga tgggtcaggt tcatctcgac atcgacggcg
     3001 cggtcgcggt catcaccctc gacaaccctg cgcatcacaa tgccgtagac gcacccatgc
     3061 gcgacgggct ggctcgcgcc tacgatcaga tcgaggccga cgatgccctg cgggtcgcca
     3121 tcatccgggg cgccgggacc gggtcgttct gcgcgggcgg ttccatcgac ggctatctag
     3181 aggcgggcgt gttcggaccg ggggctgcgc atctgccgcg gattccgcgg ccatccgcct
     3241 cgcgtaagcc ctatattgcc gcgatgtgcg gccatgccct gggcggcggg ttcagcctgg
     3301 cgctgacctg cgacatccgc gtggccgggc gcggcgccag catgggaccg accggtctga
     3361 agatgggtgc cgtgcagggg gccgagacga tcactcgcct gacgcggttg atcgggcaga
     3421 gccgtgcgac cgatgtcctg ctgcaatccc gccgcctgtc cggcgaggaa gccggggcga
     3481 tcggcctggt gcagcacgtc atcgacgatg atgcggtcat gcagacagcc cggcacatcg
     3541 ccgggaggat cgcggggttc agcccctgga ccgtacagat gaccaaggag ctggtgtcga
     3601 ggacgctcga cctgacgctg gaggcctcga tcgcgcgcga ggatgccgtg gcgtccgaag
     3661 gctatggccg accggatgcg ctggaaggct tccgggcgtt caaggaaaag cggaagccga
     3721 ggttctgatg gcgcaaccgg ggactgtcag gccgttggac gggatccgcg tggtgcacct
     3781 cgcctcgctc ggaccgggac cctatgccgc catgctgctg gccgacatgg gcgccgaggt
     3841 cgtcatcgct gatcggac
//
LOCUS       DTVW01000333            1012 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1418117, whole
            genome shotgun sequence.
ACCESSION   DTVW01000333 DTVW01000000
VERSION     DTVW01000333.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1012)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1012)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1012
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1418117"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
BASE COUNT          514 a          100 c          187 g          211 t
ORIGIN      
        1 atataggaag attggaagaa agtgtaaaga aacaagaaga aaatatctta gaagctgaaa
       61 aaaaacatga agaagaaata gaagaaaata ataaaaccat tcttaatctt aaagatgaag
      121 ttaataccct gataagaaat cttgacgaca aagataacaa gataaaacat cttaacgcta
      181 tatatgaaga gagtaaagaa aatattttta ctttaaagaa aaatgttgaa attaaagaaa
      241 cagaacataa acaaattcag caagaaatgt taagcagaat aaaagggcaa gatgaagtca
      301 taagagaggc agaagaaaag catacaagat taacacaaat tcttagtgaa aagaaagcac
      361 atataggaag attggaagaa agtgtaaaga aacaagaaga aaatatctta gaagctgaaa
      421 aaaaacatga agaagcagca gaagaaaata ataaaagttt agaggaaaaa gataaacata
      481 tattggtatt gaaagaacaa atagcatata aggatgaaga acttatagca cttcaaaagg
      541 cacatgaatc aaatatagaa aaacttgata ctttagtaga agagaaagct aaagaaataa
      601 aaaagcttta tctgacaaat aaagactacg agaataagga aaaagaatat agtgagagtg
      661 tgctaactct aaagaaatct ttgctagaaa aaaatgaaga gattcagtca ctacagcatt
      721 tgcagaaaaa acaaagtgag gaggcatcat tcttattaag aaaaattact aaagagaacg
      781 atgaaaatat tttaaccctt aaaaaagagt atgatgcagc agtcaagaaa aatagattag
      841 atatagaagt tacgggagaa acacttcttg acaaagaaga ggtaataaaa aagttaaaat
      901 tagaagtaga agaaaagcag gcaggtatag atgagttaaa gtctgtaaaa gacaacgatc
      961 ttttagaaat gacaaagaat atcaatgaac taaaagaaca acttgcaata ag
//
LOCUS       DTVW01000334            2435 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1418591, whole
            genome shotgun sequence.
ACCESSION   DTVW01000334 DTVW01000000
VERSION     DTVW01000334.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2435)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2435)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2435
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1418591"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..263)
                     /locus_tag="EYO87_04445"
     CDS             complement(<1..263)
                     /locus_tag="EYO87_04445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011750184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HIC65244.1"
                     /translation="MLPPRNPDERLKARGADTRPVGRFEVHSRAREHDGWEIPEDETL
                     LRTEVVTEQPRSIITRNTSPDISFDRSINPYRGCEHGCIYCYAR"
     gene            407..1111
                     /locus_tag="EYO87_04450"
     CDS             407..1111
                     /locus_tag="EYO87_04450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005860959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin-binding protein"
                     /protein_id="HIC65245.1"
                     /translation="MAQNDDEIILSELDDDELVQQMMDDLYDGLKDEIEEAVHILLDR
                     GWAPYDVLTKALVAGMTIVGHDFRDGILFVPEVLLAAGAMKGGMAILKPLLAETGAPR
                     MGKMVIGTVKGDIHDIGKNLVSMMMEGAGFEVVDLGINNPVENYLEAIAREEADILGM
                     SALLTTTMPYMKVVIDTMKERGIRDDYIVLVGGAPLNEEFSRAIGADAYCRDAAVAVE
                     TAKTFIARRHNQLSAG"
     gene            1216..2085
                     /gene="yghU"
                     /locus_tag="EYO87_04455"
     CDS             1216..2085
                     /gene="yghU"
                     /locus_tag="EYO87_04455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018001604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-dependent disulfide-bond
                     oxidoreductase"
                     /protein_id="HIC65246.1"
                     /translation="MNDDYTPPKVWTWEKENGGQFASTNRPVAGPTHDKPLPVGKHPL
                     QLYSLATPNGQKVTILLEELLEAGKSADYDAWLIRIGDGDQFGSGFVEVNPNSKIPAL
                     MDHSVTPPRRVFESGAILLYLAEKFDAFLPHDPSLRTETLNWLFWQMGSAPYLGGGFG
                     HFYHYAPTKIEYAIDRFAMEVKRQLDVLDRHLADHRFMAGDEYTIADMAIWPWYGRLI
                     RGGAYGDAATFLDGASYTSVARWEAEIAARPAVKRGIMVNRTSGEPSGQLWERHDASD
                     FATRTQDKLDPQS"
     gene            complement(2139..>2435)
                     /locus_tag="EYO87_04460"
     CDS             complement(2139..>2435)
                     /locus_tag="EYO87_04460"
                     /EC_number="1.1.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011454362.1"
                     /note="catalyzes the formation of
                     (R)-2,3-dihydroxy-3-methylbutanoate from
                     (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and
                     isoleucine biosynthesis; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketol-acid reductoisomerase"
                     /protein_id="HIC65247.1"
                     /translation="GIANMNYSISNTAEYGEYVSGPRILPYDETKARMKAVLRDIQSG
                     KFVRDFMQENSVGQPSFKATRRINDEHQIEKVGAKLREMMPWISKGKMVDRARN"
BASE COUNT          467 a          742 c          757 g          469 t
ORIGIN      
        1 cgcgcatagc aatagatgca gccgtgttcg cagccgcgat agggattgat cgaccggtcg
       61 aacgagatat cgggcgaggt gtttcgggtg atgatgctgc gcggctgttc ggtcacgact
      121 tcggtgcgca gcagcgtctc gtcctcgggg atctcccagc cgtcatgctc gcgcgcgcgg
      181 ctatggacct cgaaccggcc aacgggccgg gtatcggcgc cgcgggcctt cagacgctca
      241 tcgggatttc tgggcggcaa catgcggcaa atctagaaca ttatggcaac actttccagc
      301 gattcgacac acaagtcgcg cgcgggatcc gccatgtcgc tttgcagctt tccaatttcg
      361 tcaaatcgcg tccatttcgc ggtgaaacgc atcaggagtc gtgccgatgg cccagaacga
      421 cgacgagatc atcctgtccg aactggatga cgacgagctt gtccagcaga tgatggacga
      481 cctctatgac ggtctgaagg acgagatcga ggaagccgtc cacatcctgc tggaccgtgg
      541 ctgggcgccc tatgacgtgc tgaccaaggc gctggtcgcg ggcatgacca tcgtcggcca
      601 tgatttccgc gacggcatcc tgttcgtgcc cgaagtgttg ctggcggcgg gtgcgatgaa
      661 gggcggcatg gccattctga aaccgcttct ggccgaaacc ggcgcgccgc gcatgggcaa
      721 gatggtgatc ggaaccgtca agggcgacat ccacgacatc ggcaagaacc tggtctcgat
      781 gatgatggag ggcgccggct tcgaggtggt cgatctgggc atcaacaacc cggtcgagaa
      841 ttatctggaa gccattgcgc gggaagaggc cgacatcctg ggcatgtcgg ccctgctgac
      901 caccaccatg ccctatatga aggtcgtgat cgacacgatg aaggaaaggg gtattcgcga
      961 cgactacatc gtgctggtcg gcggcgcgcc cctgaacgag gaattcagcc gtgccatcgg
     1021 cgccgacgcc tattgccggg atgcggccgt cgcggtggaa accgccaaga ccttcatcgc
     1081 gcgcaggcac aaccagcttt cggcgggttg atgtccttcg gacgggcgca catgacctgt
     1141 gcgacgcctt cacgttgaac ttcggccgcg cgcatcacat cttggctgca accacggcag
     1201 ccgacaggag atgtgatgaa cgacgactac accccgccga aggtctggac ctgggaaaag
     1261 gaaaacggcg gacaattcgc cagcaccaac cgaccggtcg ccgggccgac ccatgacaag
     1321 cccctgcccg tcggcaagca tcccctgcag ctttattcgc tggccacgcc gaacgggcag
     1381 aaggtcacga ttctgctgga ggaattgctg gaggccggca aatccgccga ctacgacgcc
     1441 tggctgatca ggatcggcga tggcgaccag ttcggcagcg gtttcgtcga ggtgaacccc
     1501 aattcgaaga tccccgccct gatggatcat tccgtgacgc cgccgcgccg cgtcttcgaa
     1561 tcgggcgcga tcctgctgta tctggccgaa aagttcgatg ccttcctgcc gcatgacccc
     1621 agcctgagga ccgagaccct gaactggctg ttctggcaaa tgggttcggc cccctatctg
     1681 ggcggcggtt ttggccattt ctatcattat gcgccaacga agatcgaata tgcgatcgac
     1741 cgtttcgcga tggaggtgaa acgccagctt gacgtgctgg accgccatct ggccgatcat
     1801 cgtttcatgg cgggcgatga atacacgatt gccgatatgg cgatctggcc ctggtatggt
     1861 cggttgatca gaggcggcgc ctatggcgac gcggcaacct tccttgacgg cgccagctat
     1921 accagcgtcg cccgctggga agccgaaatt gccgcccgcc ccgccgtcaa acgcggcatc
     1981 atggtgaaca ggacctcggg cgagccgtcc gggcagttgt gggaacgcca cgacgcatcg
     2041 gatttcgcga ccaggacgca ggacaagctg gatccgcaat cctgacagcg gaaagcccgg
     2101 gaccggcccg ggctttccct gttttccgtc ccccgcgatc agttgcgggc gcgatccacc
     2161 atcttgccct tgctgatcca gggcatcatc tcacgcagct tggcgccgac cttttcgatc
     2221 tggtgttcgt cgttgatccg gcgcgtggcc ttgaacgacg gctgaccgac gctgttttcc
     2281 tgcatgaaat cgcgcacgaa cttgcccgac tggatgtcgc gcagaaccgc cttcatccgc
     2341 gccttggttt cgtcataggg caggatgcgc gggccgctga catattcgcc gtattcggcc
     2401 gtgttgctga tcgaatagtt catgttggcg atgcc
//
LOCUS       DTVW01000335            1811 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1421687, whole
            genome shotgun sequence.
ACCESSION   DTVW01000335 DTVW01000000
VERSION     DTVW01000335.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1811)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1811)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1811
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1421687"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..756
                     /locus_tag="EYO87_04465"
     CDS             <1..756
                     /locus_tag="EYO87_04465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009803530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiolase family protein"
                     /protein_id="HIC65248.1"
                     /translation="PYSVFMDVYAGFARLHMKTFGTTQEQFAAVAAKNHAHSVHNPLA
                     QYREAMSVDRVLAAPPITYPLTLPMCAPISDGAAAAVLCTGEGIKRLGLDPARAIKVK
                     AAILRSGTDRPPEDYKNHLTRLAALEAYEQAGIGPEDISVAEVHDATAVGEVIQIENL
                     GFVEFGEGGPASLRGETKIGGRIPVNPSGGLESKGHPVGATGIGQVFELVTQLRGEAG
                     ARQVEGAKNAIAENGGGLHGVEEAAACVTILGR"
     gene            773..>1811
                     /locus_tag="EYO87_04470"
     CDS             773..>1811
                     /locus_tag="EYO87_04470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009506052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
                     /protein_id="HIC65249.1"
                     /translation="MENVIAAAQAIYTDEQRMLLENFRKMAEAEFAPLAEKYENLGHP
                     PDAKTLKSLFAKVEEFGLISGLIPEEDGGAGIDRMTYGILYEELARIWADLAIAVLIQ
                     GHAVFAVNLLGNVAQKEAYLKPLLRSERICATCISEPEVGSNVREVKTRADREGDKIF
                     VTGQKLWISNGAQSDFAIVVCNLDDGISMVIVDRDTGNYESRELRKLGLVGASTCELF
                     FDRAETSADHVLGNAGGGLFQTLKLFESARVFVGLTSIGIAQAALECAVKYAQDRQQH
                     GKPIGGHQLIQGYLADMATHLDAARLLCQRGLQLLDLGVRCDTQTSMAKWYATEMAVE
                     IAGKAVQIHGGN"
BASE COUNT          384 a          529 c          575 g          323 t
ORIGIN      
        1 ccctacagcg tgttcatgga tgtctacgca ggcttcgccc ggctgcacat gaagaccttt
       61 ggcacaactc aggaacagtt cgccgccgtc gccgccaaga accatgcgca ttccgtgcat
      121 aatccactgg cgcaataccg agaagccatg agcgtcgatc gggtattggc cgcgccgccg
      181 atcacctatc cgctgaccct gccgatgtgc gccccgatct cggacggggc cgctgcggcc
      241 gttttatgca ccggcgaggg gataaaacgt ctgggcctag atcccgcgcg cgcgatcaag
      301 gtcaaggccg cgatcctgcg ctcgggcacc gatcgtccgc cggaagatta caagaaccac
      361 ctgacccggc ttgccgcgct tgaggcctat gaacaggccg ggatcggccc cgaggatata
      421 tcggtggccg aagtgcatga cgccacggcc gtgggcgaag tgatccagat cgagaacctc
      481 ggatttgtcg aattcggcga gggcggtccc gccagtctgc gcggcgagac aaagatcggt
      541 ggacgcattc cggtgaaccc ctcgggcggg ttggaatcca agggccaccc ggtcggtgcc
      601 acagggatag ggcaggtttt cgaactggtc acgcaactac gcggcgaagc tggcgcgcgt
      661 caggtcgaag gggcaaagaa cgccatcgcc gaaaacggcg gggggttgca cggggtagaa
      721 gaagcggccg cctgcgtcac cattctgggc cgttgaaaca aggagacgaa ccatggaaaa
      781 cgtgatcgcc gccgctcagg caatctatac agatgagcaa cgcatgttgc tggaaaactt
      841 ccgcaagatg gccgaggcag agttcgcgcc gctggccgag aaatacgaga acctcggcca
      901 cccccccgat gcgaaaaccc tgaagtccct gttcgccaag gtcgaggaat tcgggctgat
      961 cagcggcctg atccccgaag aggacggcgg tgccggaatc gaccgcatga cctatggcat
     1021 cctatacgag gaactggccc ggatatgggc cgatctggca atcgcggtgc tgattcaggg
     1081 tcatgccgtg ttcgcggtca acctcttggg aaatgtggcg cagaaagagg cctatctgaa
     1141 gccgctcctg cgcagcgaac ggatctgtgc cacctgtatt tccgaaccag aggtcggttc
     1201 gaacgtacgc gaggtcaaga cacgtgcgga ccgcgagggc gataagattt tcgtcactgg
     1261 ccagaagctc tggatttcca atggggccca gtcggatttc gccatcgttg tctgcaatct
     1321 ggacgacggt atttccatgg tcatcgtcga ccgcgatacc ggcaactacg agagccgcga
     1381 attgcgcaag ctggggcttg tcggtgcatc gacctgcgaa ttgtttttcg accgtgccga
     1441 aaccagcgct gaccatgttc tgggtaatgc aggcggcggc ctgttccaga cattgaaact
     1501 gtttgagagc gctcgcgtgt ttgtcggcct gacgagcatt ggcatagcgc aggcggcgtt
     1561 ggaatgtgcc gtcaaatatg cgcaggatcg ccaacaacat ggtaagccga tcggcgggca
     1621 ccagttgatt caaggctacc tggccgacat ggccacgcac ctggatgccg cgcgcctgtt
     1681 gtgccagcgc gggctgcaac ttctggacct gggcgtgcgc tgtgacaccc agacctcgat
     1741 ggcgaaatgg tatgcaaccg aaatggccgt cgaaatcgcc ggcaaagcgg tgcagatcca
     1801 cggcggcaac g
//
LOCUS       DTVW01000336            1781 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1422791, whole
            genome shotgun sequence.
ACCESSION   DTVW01000336 DTVW01000000
VERSION     DTVW01000336.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1781)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1781)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1781
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1422791"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..206)
                     /locus_tag="EYO87_04475"
     CDS             complement(<1..206)
                     /locus_tag="EYO87_04475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008887352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HIC65250.1"
                     /translation="MNIKGLLAAAVMAALGMATQAAAQTEIKFGHVGEPGSLMDLSAT
                     EFAKRANEKLGDKAKVVVYGSSQLG"
     gene            complement(711..1061)
                     /locus_tag="EYO87_04480"
     CDS             complement(711..1061)
                     /locus_tag="EYO87_04480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018149423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two pore domain potassium channel family
                     protein"
                     /protein_id="HIC65251.1"
                     /translation="MNLVMRFGDSPGLSGSGRVLVALYTLGIAHVVEAGLYAVGFSMG
                     EALGIGGFEQDIVDSFMDVFYFSLVNYSSLGLGDIYPTGHLRFLAGIEALNGFLLISC
                     SASTIFLVVTKRGN"
     gene            complement(1142..1561)
                     /gene="cueR"
                     /locus_tag="EYO87_04485"
     CDS             complement(1142..1561)
                     /gene="cueR"
                     /locus_tag="EYO87_04485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018065824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cu(I)-responsive transcriptional regulator"
                     /protein_id="HIC65252.1"
                     /translation="MNIGDVATLSGLPAKTIRYYEDIGFVKPLRSQNGYRIFRESDAH
                     KLAFLGRARALGFSIEDCRNLLALYEDERRASAEVKDIAGQHLKRIDRKIAELVEMRA
                     TLAHLFEACAGDHRPDCPILADLATKGPDGEVLDRTG"
     gene            complement(1575..>1781)
                     /locus_tag="EYO87_04490"
     CDS             complement(1575..>1781)
                     /locus_tag="EYO87_04490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009820194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase"
                     /protein_id="HIC65253.1"
                     /translation="LIPVAAGVIYPVSGLLLSPMLAAGAMALSSVFVLTNALRLRRVR
                     PVMEETGKGPERSGSPTVSPVAAE"
BASE COUNT          355 a          585 c          520 g          321 t
ORIGIN      
        1 cccagctgac tggatccata gaccacgacc ttggccttgt cgcccagctt ctcgttcgcg
       61 cgcttggcga attcggtggc gctgagatcc atcagcgaac ccggctcgcc gacatggccg
      121 aacttgatct cggtctgcgc ggcagcctgc gtggccatgc ccaaggctgc catgactgcg
      181 gcagccagca atcccttgat attcatcttg tctcctccct gtttgcgttg ttttcgcctg
      241 ttggcccgcc cctcgtcctc ctctgacaag ggcgggaagc accgctgacc ggatgatggc
      301 aagcagtcct gaaccagatc cttggttcgc gcggccgctg ttgcggcggc ttcgtgcctc
      361 gcccccgtca aggctggaca gcgcaccgca ttcgccgtgg ggtaaccgcc atttcggccg
      421 cgcgaaccac ccgatgtccc tcctccgaca atctggcgta attttgtatt atgtataatg
      481 aatgattccg cagccggtca acccgcttcg caccggtccg caatccggcc gggttgcggc
      541 atgggtattg acgctgccgg cgatggaatc tgaaaggcga aagcgcgccc tgacgatggg
      601 cgcgcgcagt gcatgaaccg gtccagcctc gtcgtccgca agcttgggaa ccaggcgcgc
      661 agactgcgcc gacccggacc ggcgccagac agcgagggac gtgcgatccg tcagttcccg
      721 cgcttggtca ccaccaggaa aatcgtcgag gccgaacagc tgatcagaag aaatccgttc
      781 aaagcctcga tgccggcgag gaaccgcaaa tgcccggtgg gatagatatc gcccagccca
      841 agagacgaat aattgacgag cgagaagtag aagacatcca tgaacgaatc gacgatatcc
      901 tgttcaaaac ccccgatgcc caatgcctca cccatgctga agccgaccgc atagaggccg
      961 gcttcaacga catgggcgat ccccagcgta tagagtgcca ccagaacccg ccccgatccc
     1021 gacaatccgg ggctgtcgcc gaatctcatc accagattca tcgcgcgaag atgaaccagc
     1081 ccgctcagcc cgaacagggc gaccgccaga aaaagggacc agaccaaatt ctcggattcc
     1141 ctcagccggt cctgtccagc acctcgccgt ccgggccttt cgtggcaagg tcggcgagga
     1201 tgggacaatc cggtcggtgg tctccggcgc aggcctcgaa aagatgcgca agggtcgcgc
     1261 gcatttccac aagttccgcg atctttctgt cgatccgctt caggtgctgg ccggcgatat
     1321 ccttcacctc ggcgcttgcg cgtctttcgt cctcgtagag cgcaagcaga ttgcggcaat
     1381 cctcgatgga aaagcccagg gcgcgcgcac ggccgagaaa ggcaagcttg tgcgcgtcgc
     1441 tttccctgaa gatccgatag ccgttctggc tgcgaagcgg cttcacgaaa ccgatatcct
     1501 cgtagtagcg gatcgtcttg gccggcaggc cggacagggt ggcaacatct ccgatattca
     1561 tgtcgtggcc ctttctattc tgcggcgacc ggggaaacgg tgggcgaccc cgacctttcg
     1621 ggacccttgc cggtctcttc catgaccgga cggacccggc gcagccgcaa ggcgttggtc
     1681 aggacaaaga ccgaactcag cgccatggcg ccggcggcca gcatcggcga cagcagcaat
     1741 cccgataccg gatagatcac gcccgccgcg accgggatca g
//
LOCUS       DTVW01000337            3336 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1424704, whole
            genome shotgun sequence.
ACCESSION   DTVW01000337 DTVW01000000
VERSION     DTVW01000337.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3336)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3336)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3336
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1424704"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(74..2341)
                     /locus_tag="EYO87_04495"
                     /pseudo
     CDS             complement(74..2341)
                     /locus_tag="EYO87_04495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005848479.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
     gene            complement(2357..2536)
                     /locus_tag="EYO87_04500"
     CDS             complement(2357..2536)
                     /locus_tag="EYO87_04500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005848478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65254.1"
                     /translation="MKDGIAMIGTAPDDERERENGVMNNGFGGGMMFGMGLFWLIALV
                     VAVLVVAALIKYLRK"
     gene            complement(2957..>3336)
                     /locus_tag="EYO87_04505"
     CDS             complement(2957..>3336)
                     /locus_tag="EYO87_04505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009449870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIC65255.1"
                     /translation="NRYPHEFSGGQRQRIGIARALALEPSIIIADEAVSALDVSIQAQ
                     VLDLLAELKARLNLSMLFITHDLRVAARICDRIIVMQKGAIVEVGPTGKVLHDPDTAY
                     TRSLLDAIPGQEYERALAAGGDF"
BASE COUNT          629 a         1100 c         1044 g          563 t
ORIGIN      
        1 aagcagcggc gaccgtagtc ggcggtcagc ggattgtcga ggccgtagtt tttcttggtc
       61 tcctcggttt cgcgcgagag aacatcagga agataccgat cccggcgctg agcgcgaggg
      121 tccagggcac gatgacgccg cgcgcgcctt gccgaaagac cgccaggacg ccggcgtcga
      181 agctcatgtc tccgcccttg ctgctgccgg gcagcgcgtc gccgcggaag aaggcacgcc
      241 agaaggggcg gccgcgccgg gtgttccaga ccatgaactg gatcatggcc acgatctcgt
      301 ccagcgagaa ggggatcatg atcagcatcg ccagcgcagc catcaggcag atggtacaat
      361 aggtgccgat ggtgatcggc tggatgatga tgaaatagat gctcacgatg ccgagcggcc
      421 cgaccacgat cccgaacagc gccaccatcc acggcatcgt ccgccagcgc aggcggctac
      481 ccatgacgcc catcaggatc tcgaacatgt agctcatggc gccaagtccg ccatcggcga
      541 tgggccaggc tttcgagaca tccgaggtga cgatgtattc ggtgccgttc aggcccgagg
      601 gcgaggagaa gaacggctcc cagacgccat cgacatggcc aagctgatag gccgcgagga
      661 tccgcgacag gatgaacccc acagcgccca gtgcgatgat cggaaggcgc tggacatagg
      721 tcgagggaca ataggtccat ccgggaggga tgtcgccatc gtccatcatc ccctcgcgcg
      781 acatgcccgg catcatcggg atcaggatgg tcagcgcgat caccagcgcg ccgatcaggg
      841 tgtcgttggc atagaccgac gcattcggcg tccagaagat cagcggggcg gccagcagcc
      901 agacgccaag cgcggcattc gcccattgcg cccagcccat gccggggcga agcgacagcc
      961 cggcaaagac catgatgagc agtccggtga aaacatcgtt ccaggcggtc agccaactgc
     1021 gcgtggcagc gtcccaaagt ccgcgatcct cggtcacgcg ctggactgcg gcgctgaact
     1081 cggtctggtc gaacgtgccg aagaccgacg gcgcggttgc cagccagagg cccagcccca
     1141 tcaccagcca gtgaacccag agcatcgaga aatgcatctg ccgcatctgg gcggcatggt
     1201 cgcgttcggc cgtatcctgt tcggcggcgg gcggcgcgta ttccgccgcc tcctcggcgg
     1261 cggctttctc gacctttgcc gccgaaacgc gggcggcatt caggccattg ccgcgatacc
     1321 aggcataggg atcgtccttc agcccctgaa ggatcttcgg catgtcgtcg cgcaggctgt
     1381 gctgcggcgt ccatccgaga tgcttcttgg cggccgaaag atccagttca tagtgatcgc
     1441 ttgaaatgtc caccatccag gcgcggatga aggcattctc gccgaagacc cggttctcga
     1501 tccacgcccc tgccttggcc aggcgcggcg gcacgttcca ggtgatccag tcctcgccat
     1561 gcagttcccg gccgatcaaa cgctgcaact cgccgaaggg gacgggatct tcctcgccca
     1621 gcagcaccgg gaagatgtcc ggcagatcgg cgcgcctgtc cacgatccgc tccaccgcgt
     1681 cgagcagatc ctccagatgc aggaatgcct gcccgcgtgc cagatcgccg ggatagacct
     1741 tgccgctgaa ccgcttttcg tggacgcggg cgatctgatg ggcgaggaag gtcgaacggc
     1801 cgctgtcgtc atagacgccc gcagggcgca tcagcacaag cttctcgtgg ccccgctgtt
     1861 cgcgcaacat ggcctcggtg cggatcttgg aggcgcgata gggcagcttc ggatcgaagg
     1921 gatcatcctc ggcgatcggc cgccccggtt cggtgggtgc gtgggccagc atggtcgagg
     1981 cgaagacgaa ctgctccagc tcgaattcct gcaagccggt cagaagacgt ttcgtcccat
     2041 cgaccgtcac cgcgtcatag gcgccgcttt cctttcccgt caggtcgaaa taggcggcaa
     2101 gatggacgca ggcggcgatg cggtcgccat aggcgagacg caggcgggac agcgccttgt
     2161 ccacgctatc ctggtcggtg atgtcgaaac agatgcattc ggcctgatgc ggcggatgcg
     2221 gcggcgaatg caggtccaga cccacgaccc gatagcgccg gtgcaggcgc cgcaccaccg
     2281 cgccgcccag atacccgctt gatccggtta cgacgacaag aggtttttcg cgatcatcca
     2341 tccggccttc cgccccctat ttccgcaggt acttgatcaa ggcggccacg accaggaccg
     2401 ccaccaccaa tgcgatgagc cagaaaaggc ccatcccgaa catcatgccg ccgccaaatc
     2461 cgttgttcat cacgccattc tccctttccc gttcgtcgtc tggggccgtg ccaatcatcg
     2521 cgatgccgtc tttcaacggc tgaaagcgat gtgattttga tcgggatcga cctggtgcga
     2581 ccctgcgcct gcccttcaat ctgcccgatc cccggccgcc cgtgaagcct gttcgcggac
     2641 cggcggagtt tcgcgacatc gccgggacca aggatcaccc cgccttgccc gtcgccttct
     2701 gaaaaggctt tgtcctggca gccggaaggt caagccccgc cgcaggtcat tttccttctt
     2761 gaccgtgcgc ctgcccgccc cccgtgccgg cgcgcaggcc gtgcggggaa caaggtcacg
     2821 ggcggcaggc ccagccagga aaaacgatgc ccacgtctgc catttcagct tgaatcccaa
     2881 gtgccgctag gcgaggccgg atgcgcaagt tgaagatcag cgccctgacc cgtgcaacag
     2941 gccatcggcc gcgcgtctag aagtcgccac ccgccgccag cgcgcgttcg tattcctggc
     3001 ccggaatcgc gtccagcagg ctgcgcgtat aggccgtgtc ggggtcgtgc agcaccttgc
     3061 ccgtcggtcc cacttcgacg atggcacctt tctgcatgac gatgatccgg tcgcagatgc
     3121 gggcggcaac gcgcaggtcg tgggtgatga acagcatcga caggttcagc cgcgccttca
     3181 attcggccag cagatccaga acctgcgcct gtatcgacac atccagcgcc gagaccgcct
     3241 cgtccgcgat gatgatcgac ggttccagcg ccagcgcacg ggcgatgccg atccgctgac
     3301 gctggccgcc ggaaaattca tgagggtagc gattat
//
LOCUS       DTVW01000338            1246 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1425097, whole
            genome shotgun sequence.
ACCESSION   DTVW01000338 DTVW01000000
VERSION     DTVW01000338.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1246)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1246)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1246
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1425097"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..144)
                     /locus_tag="EYO87_04510"
     CDS             complement(<1..144)
                     /locus_tag="EYO87_04510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008887979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/methenyltetrahydrofolate cyclohydrolase"
                     /protein_id="HIC65256.1"
                     /translation="MTAHLIDGKSFAATLRDRITAEVAALADRGITPGLAVVLVGEDP
                     ASQV"
     gene            complement(141..443)
                     /locus_tag="EYO87_04515"
     CDS             complement(141..443)
                     /locus_tag="EYO87_04515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011747036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate mutase"
                     /protein_id="HIC65257.1"
                     /translation="MTRTDDIPDMPALRARIDALDAQLIALFAERSALIDRAARIKAE
                     RGLPARIDWRVEEVVANARRNAADAGLDGALFAQIWRQLVDAAIDQEERHLNGDRP"
     gene            complement(700..>1246)
                     /locus_tag="EYO87_04520"
     CDS             complement(700..>1246)
                     /locus_tag="EYO87_04520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011747035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cell division protein FtsH"
                     /protein_id="HIC65258.1"
                     /translation="VSLPEMDRLNFHKDEAKQKLAMTMAGKAAEIIKYGEDGVSNGPA
                     GDIQQASQLARAMVMRWGMSDKVGNIDYAEAHEGYSGNTGGFSVSAATKELIEEEVRT
                     LIEEGYQEARRILIEKEEEYERLAKGLLEYETLTGEEIGKVIRGEQLGGDDDMPGSSI
                     PSVTSIPKAGKPAPGGDPAPA"
BASE COUNT          186 a          406 c          412 g          242 t
ORIGIN      
        1 gacctggctg gccggatcct cgcccaccag caccacggcc aggcccggag tgatgccgcg
       61 atccgcaagc gcggcgactt cggccgtgat gcggtcgcgc agggtggcgg cgaaggactt
      121 gccgtcgatc agatgggcgg tcatggacgg tctccgttga ggtggcgttc ttcctggtcg
      181 atggcggcgt ccaccagctg gcgccagatt tgcgcgaaaa gtgcgccgtc cagtcccgca
      241 tcggcggcat tgcggcgtgc atttgcgacg acttcctcga cccgccagtc gatccgcgcg
      301 ggaagtccgc gttccgcctt gatccgagcg gcgcggtcga tcagcgcgct gcgttcggcg
      361 aacaatgcga tcaactgcgc gtccagggcg tcgattcggg cgcgcagggc gggcatgtcg
      421 gggatgtcat cggtgcgggt catctgacct tggacatgca ccggcgggca ggcgggtgca
      481 agagccgcag gcgctgcgcg gcttggctcg ctttgtcacg aagccgccgg cagcgtgcgg
      541 gtctcggccg ggcctggcct gcgcggggaa aggggtttcg cgctgaaggt cgaaatcaat
      601 caccggcctg ccagatgccg atccggcggc gagcctgcaa aaaaaaaccg gcccatcatg
      661 agggccgggg ggaatcgtcc tgttcctggt cgagaatcct caggccgggg cgggatcacc
      721 gccgggcgcg ggttttccgg ccttcgggat cgatgtgacc gaggggatcg agcttcccgg
      781 catgtcgtca tcgccgccaa gctgttcgcc gcggatgacc ttgccgatct cttccccggt
      841 cagcgtctcg tattccagca agcccttggc gagacgctcg tattcctctt ccttctcgat
      901 caggatccgg cgggcctcct gataaccttc ctcgatcagg gtgcggacct cttcctcgat
      961 cagttccttg gtcgcggccg agaccgagaa accgccggta ttgccggaat agccctcatg
     1021 cgcctcggca tagtcgatat tgccgacctt gtccgacatg ccccaccgca tgaccatggc
     1081 ccgggccagt tgactggcct gctgaatatc gccggcgggg ccgttcgaca caccatcctc
     1141 gccgtatttg atgatctcgg cggccttccc cgccatggtc atggccagtt tctgcttggc
     1201 ctcgtccttg tggaaattca gccggtccat ttccggcagg ctgacc
//
LOCUS       DTVW01000339            1442 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1425678, whole
            genome shotgun sequence.
ACCESSION   DTVW01000339 DTVW01000000
VERSION     DTVW01000339.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1442)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1442)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1442
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1425678"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            215..676
                     /locus_tag="EYO87_04525"
     CDS             215..676
                     /locus_tag="EYO87_04525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010398729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HIC65259.1"
                     /translation="MEQLDATDRRILALLQKEGRISNADLALRVNLSASACHRRVQRL
                     EAAGVISAYVALLDARKLRRQTTVFVEITLSGQTDDVLDGFERGVRAIPDVLECHLMA
                     GTADYLLKIVVEDTDDFARIHRQFLAKLPGVQQMHSSFALRTVFRTTALPV"
     gene            complement(629..1366)
                     /locus_tag="EYO87_04530"
     CDS             complement(629..1366)
                     /locus_tag="EYO87_04530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65260.1"
                     /translation="MSVLNRRDWQPGSLLRQMRDGIHRPTLMALLSVDLGLVLLHSAL
                     GYLLMVNALDAIPDLLRIDRDFGLGETFGYAKWAALVAIMVAAYLRSRAPVFLALAAL
                     WLFALADDSLQLHENVALAVLSRLPSKTIDTGVIEVAFFIAAGAILMLPASLALIRST
                     ARQRLQIAPLILLFAGVVACGMGVDFVHSLVEGNTLIAGILGIIEDGGEMVFMSAMLA
                     YALGTFGLPARASDRQRGGAKDGAQRE"
BASE COUNT          309 a          445 c          454 g          234 t
ORIGIN      
        1 cgaccgcctc ggcggcggcg gcgggggtca gacccacgcg aaattcctgc ggcttgatct
       61 ctgccgggca accgatcttc atgatgttct cctctcgctg cgtgccagtg tgccagcggc
      121 gggcgcgaag gtgctgcgaa cctgtccgcg cgccatcgcc ggcgatcgaa gaaaacgctg
      181 gaatggcggc gaatcttcga agaaattgcc cagcatggaa cagttggacg caacagaccg
      241 ccggattctc gccttgctgc agaaagaggg gcgaatcagt aatgccgatc tggcgttgcg
      301 ggtgaatctt tcagcctcgg cctgccaccg gcgcgtgcag cggctggagg cggcgggagt
      361 catctcggcc tatgtcgcgc ttctggacgc gcgcaagctg cgccgtcaga ccacggtttt
      421 cgtcgaaatc acgctgtcgg ggcagacaga cgacgtgctg gacggatttg aacgcggcgt
      481 gcgcgcgatt ccggatgtgc tggaatgtca tctgatggcg ggaacggcgg attacctgtt
      541 gaagatcgtg gtcgaggata ccgacgattt cgcccgcatc caccggcaat tccttgccaa
      601 gctgcccggc gtccagcaga tgcattcgtc attcgcgctg cgcaccgtct ttcgcaccac
      661 cgcgttgccg gtctgaggcc cgcgcgggca ggccgaatgt gcccagggca taggccagca
      721 tggccgacat gaagaccatc tcgccgccat cctcgatgat tcctaggatt ccggcgatca
      781 gcgtattgcc ttcgaccagc gaatgcacga agtcgacgcc cattccgcaa gcgaccaccc
      841 ccgcgaaaag caggatcagg ggcgcgatct gcaaccgctg ccgcgccgtg ctgcgaatca
      901 gggcaaggct tgccggcagc atcaggatgg cgccggcggc gatgaagaag gcgacctcga
      961 tcactcccgt gtcgatcgtc ttcgacggca gccgggacag gaccgcaagg gcgacattct
     1021 cgtgcaattg caggctgtca tcggccagcg cgaaaagcca aagcgcggcc agtgcaagaa
     1081 agaccggcgc gcggctgcgc agataggctg cgaccatgat cgcaaccagc gcggcccatt
     1141 tcgcatagcc gaaggtttcg cccagaccga aatcacggtc gatccgcagc agatcgggaa
     1201 tcgcgtccag cgcgttcacc atcagcagat atccaagagc agaatgcagc aggacaaggc
     1261 caagatcgac cgacagaagc gccatcagcg tgggccggtg aatgccatcg cgcatctgcc
     1321 gcagaagcga gcccggctgc caatcgcggc ggttcaggac agacatgcca ggttccggaa
     1381 cagacagatg tgagacaagg aaaccaacca gatccgtaac aaaagtgttg caaacactaa
     1441 cg
//
LOCUS       DTVW01000340            1624 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1428126, whole
            genome shotgun sequence.
ACCESSION   DTVW01000340 DTVW01000000
VERSION     DTVW01000340.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1624)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1624)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1624
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1428126"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..869
                     /locus_tag="EYO87_04535"
     CDS             <1..869
                     /locus_tag="EYO87_04535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009504854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HIC65261.1"
                     /translation="LPIPGIVHIDQPDWWSEGGDMTPEEFGLERARQLEAKIEEIGPD
                     KVAAFIAEPVQGAGGVIVPPETYWPEINRILAKYDILLIADEVICGFGRTGNWFGSQT
                     MGMTPDIMTIAKGLTSGYAPMGGSILSDRVAKVINETGEFAHGYTYSAHPVAAAVALE
                     NLRILDEDGIVDRVAKVTAPYLKARWESLTDHPMVGEAKIVGMMGSIALTPDKDSRAR
                     FAADAGTVGLICRERCFANNLVMRHVGDRMIISPPLVISESEIDLLIERARTSIDQAC
                     QLVREQGLWQAA"
     gene            1064..>1624
                     /locus_tag="EYO87_04540"
     CDS             1064..>1624
                     /locus_tag="EYO87_04540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_354237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease D"
                     /protein_id="HIC65262.1"
                     /translation="MSIHLYPNDLPDDVNLGPVVAIDTETMGLDPRRDRLCLVQMSAG
                     DGDAHLVQIERGQTEAPNLCRILTDPKVVKLFHFGRFDIAALENAFGVVTSPVWCTKI
                     ASKLVRTFTDRHGLKYLLNELADVDVSKQQQTSDWGQPDLTDAQLEYAASDVLHLHKL
                     KAALEERLKRENRMGLAQACFDFLPAR"
BASE COUNT          304 a          510 c          537 g          273 t
ORIGIN      
        1 gcctgccgat ccccggcatc gtccatatag accagccgga ctggtggtcg gaaggcggcg
       61 acatgacgcc cgaggaattc ggcctcgaac gcgcccgcca gcttgaggcg aagatcgagg
      121 aaatcggccc cgacaaggtc gcggccttca tcgccgagcc ggtgcagggt gcgggcggcg
      181 tgatcgtgcc gcccgaaacc tactggcccg agatcaaccg catccttgcc aaatacgaca
      241 tcctgctgat cgcggacgag gtaatctgcg gcttcgggcg gaccggcaac tggttcggct
      301 cgcagacgat ggggatgaca cccgacatca tgaccatcgc aaagggcctg acctcgggct
      361 atgcgccaat gggcggatcc atcctgtcgg accgggtggc gaaggtcatc aacgagacgg
      421 gtgaattcgc ccatggctat acctattccg cccatcccgt cgccgccgcc gtggcgctgg
      481 aaaacctgcg catcctggac gaggatggca ttgtcgatcg cgtggccaag gtgacggcgc
      541 cttatctgaa ggccaggtgg gaaagcctga cggatcaccc gatggtgggc gaggccaaga
      601 tcgtcggcat gatggggtca atcgcgctga cgccggacaa ggacagccgg gcgcgctttg
      661 ccgcggatgc ggggaccgtg gggctgatct gccgcgaacg ctgtttcgcc aataatctgg
      721 tcatgcgcca tgtcggcgac aggatgatca tctcgccgcc gctggtcatc agcgaatccg
      781 agatcgacct gctgatcgaa cgggcgcgaa cctcgatcga ccaggcctgc cagctggtcc
      841 gggaacaggg gctgtggcag gccgcatgat cgggcgcctg ccgcgccgaa gcccggcccg
      901 cctgcggacc cttgcgccgt ggcgtgggcg tgaggatcgg ttcgacgccg atgccgtgcg
      961 acgcaccgtc atcttcctcg cggggcgcgg cgattcttct ggaatgccgc gacggtttct
     1021 ggtcagagag gcgcaaaacc ggaacccaag cagaaaaagg ccgatgagca tccatcttta
     1081 tccgaacgac ctgcccgacg acgtgaacct tggccccgtt gtggccatcg acaccgaaac
     1141 gatggggctg gatcctcgcc gcgaccggtt gtgtctggtg cagatgtcgg cgggcgacgg
     1201 cgatgcccat cttgtccaga tcgagcgcgg tcagaccgag gctcccaacc tgtgccggat
     1261 cctgaccgat cccaaggtgg tgaagctgtt ccatttcggc cgtttcgaca tcgcggcgct
     1321 ggaaaacgct ttcggcgtcg tgacctcgcc ggtctggtgc accaagatcg cctcgaagct
     1381 ggtgcgcacc ttcaccgacc ggcacgggct gaaatacctg ttgaacgaac tggcggatgt
     1441 cgatgtcagc aagcagcagc agaccagcga ctgggggcag ccggatctga cggacgcgca
     1501 actggaatac gcggcctccg acgtcctgca cctgcacaag ctgaaggccg cgcttgagga
     1561 acggctgaag cgcgagaacc ggatggggct tgcgcaggcc tgtttcgatt tccttcccgc
     1621 ccgc
//
LOCUS       DTVW01000341            1286 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1430026, whole
            genome shotgun sequence.
ACCESSION   DTVW01000341 DTVW01000000
VERSION     DTVW01000341.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1286)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1286)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1286
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1430026"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..269
                     /locus_tag="EYO87_04545"
     CDS             <1..269
                     /locus_tag="EYO87_04545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017980457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="beta-carotene hydroxylase"
                     /protein_id="HIC65263.1"
                     /translation="GIAAYGAIYFGFHDIIVHQRIPTRYLPKSSYMKRIVQAHRLHHV
                     VVTREGNVSFGFLVAPRPEALKAELKRRGRQGVRAPAGEPLAEK"
     gene            294..644
                     /locus_tag="EYO87_04550"
     CDS             294..644
                     /locus_tag="EYO87_04550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017980458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HIC65264.1"
                     /translation="MEQPTFTPPYQPIALNGTEEGAESRRSLRKAVTMRAHLRDRGQT
                     RFEIDVTDLSLMGFRAETSFTLWPGTIVWLTLPGLAGLEAVVAWRDKTQYGCAFAKPL
                     HPAVFDHIIALSQR"
     gene            complement(754..>1286)
                     /gene="prs"
                     /locus_tag="EYO87_04555"
     CDS             complement(754..>1286)
                     /gene="prs"
                     /locus_tag="EYO87_04555"
                     /EC_number="2.7.6.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010542779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ribose-phosphate diphosphokinase"
                     /protein_id="HIC65265.1"
                     /translation="DIPTDNLYAAPVMSADIHARFKGRNLMVVSPDVGGVVRARQLAK
                     RLDNAPLAIVDKRRERAGESEVMNIIGDVEGRFCILVDDIVDSAGTLCNAAAALRQAG
                     AEDVVAYVTHGVLSGGAVARVEGSVLTELVITDSIGNHESIGATSKIRHLPIAPLLGE
                     AIKRIADETSVSSLFD"
BASE COUNT          213 a          437 c          428 g          208 t
ORIGIN      
        1 cgggaatcgc ggcctatggc gcgatctatt tcggcttcca cgacatcatc gtccatcagc
       61 ggatcccgac gcgctatctg cccaagtcca gctacatgaa gcggatcgtc caggcgcatc
      121 ggctgcacca tgtcgtcgtg acgcgcgaag gcaacgtcag cttcgggttc ctggtcgctc
      181 cccggcccga agccttgaag gccgaactca agcggcgcgg gcggcagggg gtgcgggcgc
      241 ccgccgggga gccgttggca gaaaagtaac gccttccgtg gcacgataca gccatggaac
      301 agccgacctt cacgccgccg taccagccca tcgccctcaa cggaacggag gagggcgccg
      361 agtcgcgccg atcgctgcgc aaggcggtga cgatgcgcgc gcatctgcgc gatcgcgggc
      421 agacccggtt cgagatcgac gtgaccgacc tgtcgctgat ggggttccgc gccgaaacgt
      481 ccttcacgct gtggccgggc acgatcgtgt ggctgacgct gccggggctg gccggtctgg
      541 aggccgtggt cgcgtggcgg gacaaaacgc aatatggctg cgccttcgcc aagccgctgc
      601 acccggcggt gttcgaccat atcatcgcgc tcagccagcg ataggcgctg acgccagcaa
      661 agccgccgtc agtcgggtcg cgctgcgcgc ccgctggcca tgccgggcgc ggcgcttcgc
      721 gcatcggcgc tggcgtagcc gcgcctgcac ccgtcagtcg aacagcgacg acacgctcgt
      781 ttcgtcggcg atgcgcttga tcgcctcgcc cagcagcggc gcgatcggca ggtggcggat
      841 cttcgacgtc gcgccgatcg attcgtgatt gccgatcgaa tcggtgatga cgagttcggt
      901 cagcaccgat ccctcgacgc gcgcgaccgc accgcccgac aggacgccgt gcgtgacata
      961 ggcgacgaca tcctccgccc ccgcctgccg cagcgccgcc gccgcattgc acagcgtacc
     1021 cgccgaatcg acgatatcgt cgaccaagat gcagaagcgt ccttcgacgt cgccgatgat
     1081 gttcatcact tccgattcgc cggcgcgctc gcggcgcttg tcgacgatcg cgagcggggc
     1141 gttgtcgagt cgcttggcga gctggcgcgc acgcacgacg ccgccgacgt cgggtgagac
     1201 gaccatcaga ttgcgaccct tgaagcgcgc atggatatcc gcgctcatta cgggtgcggc
     1261 atagagattg tcggtcggga tatcga
//
LOCUS       DTVW01000342            1126 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1430169, whole
            genome shotgun sequence.
ACCESSION   DTVW01000342 DTVW01000000
VERSION     DTVW01000342.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1126)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1126)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1126
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1430169"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..375
                     /locus_tag="EYO87_04560"
     CDS             <1..375
                     /locus_tag="EYO87_04560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011746396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HIC65266.1"
                     /translation="ELVARIRARLRRPAAVQGCGAAKARFAGWTADFDRYMLTAPDGA
                     QTPLSHAEAEVLRLFTDHPRRLITRAQMLETLGGAAGDSFDRAMDVRISRLRNKLCED
                     PKNPRLIKTIYGAGYIFLAETS"
     gene            498..>1126
                     /locus_tag="EYO87_04565"
     CDS             498..>1126
                     /locus_tag="EYO87_04565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007427368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HIC65267.1"
                     /translation="MALAPQHPDDAARLAALRSYEILDTDPEAEYDEIAHLAGAICDM
                     PVALISFVDADRQWFKSATGIDRRETSLTESICTHAFLGDDILEIADTQDDPRTIDNP
                     LCTGREGFRFYAGAVLKTSDGLPLGTLCVLGRRPAKLTPLQRDTLRVLAAQIMARMEL
                     RKSLAHAEMLRKEVDHRVKNSLQSLASLVRLAARRARHRETAEALSTLQS"
BASE COUNT          196 a          384 c          358 g          188 t
ORIGIN      
        1 gaactggtgg cccgcatccg cgcccggctg cgccgccccg ccgcggtgca gggctgcggg
       61 gcggcgaaag cacgctttgc aggctggacc gccgatttcg atcgctacat gctgaccgcg
      121 cccgatggcg cccagacgcc gctcagccat gccgaggccg aggtgctgcg tcttttcacc
      181 gatcatccgc gccgcctgat cacccgcgcg cagatgctgg aaacgctggg cggcgcggcc
      241 ggcgacagct tcgaccgggc gatggatgtg cgcatctcgc gcctgcggaa caagctgtgc
      301 gaggatccga agaacccgcg gctgatcaag acgatctacg gtgcgggcta tatttttctt
      361 gccgaaacct cctgaaccgg ttcgcggcgg ttgtttcgcc gccgacaagc cgataagcgg
      421 ttcgtcaatc cccggcgaga ccagagaacg ccgccacagc ccgcggcacg ctgccgcctt
      481 ctttccagag attcgtgatg gcgcttgccc cccagcatcc cgacgacgcc gcccggcttg
      541 cggcgcttcg gtcctacgag atcctcgata ccgatcccga agcggaatat gacgagattg
      601 cgcatcttgc gggcgcgatc tgcgacatgc ccgtcgcgct gatcagcttc gtcgatgccg
      661 accggcaatg gttcaagtcc gcgaccggga tcgaccggcg cgagacctcg ctgacggaat
      721 ccatctgcac ccatgcgttt ctgggcgacg acattctgga aatcgccgac acgcaggacg
      781 atccgcgcac catcgacaac ccgctttgca cgggccgcga gggatttcgc ttctatgccg
      841 gcgccgtgtt gaagaccagc gacggcctgc cactgggcac cctgtgcgtg ctgggcagga
      901 gacccgcgaa gctgaccccg ctgcaacgcg acacgctgcg ggtgctggcc gcgcaaatca
      961 tggcacggat ggaattgcgc aaatcgctgg cccatgccga aatgctgcgc aaggaggtcg
     1021 atcaccgggt caagaattcg ctgcaatcac tggcttcgct ggtccgtctg gccgcaaggc
     1081 gggcgcgtca ccgcgagacg gccgaggcgc tttcgacgct gcaatc
//
LOCUS       DTVW01000343            1389 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1431135, whole
            genome shotgun sequence.
ACCESSION   DTVW01000343 DTVW01000000
VERSION     DTVW01000343.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1389)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1389)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1389
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1431135"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..906)
                     /gene="pcaQ"
                     /locus_tag="EYO87_04570"
     CDS             complement(<1..906)
                     /gene="pcaQ"
                     /locus_tag="EYO87_04570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011749735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pca operon transcription factor PcaQ"
                     /protein_id="HIC65268.1"
                     /translation="MDRRIKIRHLQTFTEIVRQRSLKGAARRLLLTQPAISRTLSELE
                     EILGAELLTRGRGGIALTPEGEFFLPHAQTSLAALEQGLAGIAQAGGAGAAQMRLGAL
                     PSVAARLMPEVLVELGRMEADLRLVITDGPHGYLTALLRDGQLDAVIGRLGAPETMRG
                     LSFTQLYLERVAVVVRPGHPILADPDLRRIGDWPVIYPPPGSAIRPFVERLLIAQGIP
                     VPRRRVESVSGEFGRVQTRHSDAIWFISAGVVARDISEGTLTRLPVETAMTEGPIGLM
                     RRADARPDPAQDMFALAVRRALARPD"
     gene            1000..>1389
                     /locus_tag="EYO87_04575"
     CDS             1000..>1389
                     /locus_tag="EYO87_04575"
                     /EC_number="1.14.13.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007204126.1"
                     /note="catalyzes the formation of protocatechuate from
                     4-hydroxybenzoate; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxybenzoate 3-monooxygenase"
                     /protein_id="HIC65269.1"
                     /translation="MRAQVVIIGGGPAGLLLGQLLHRRGIEAVVLERKTRDYVLGRIR
                     AGVLESGLVALLEEAGVANRLRAEGFVHDGTRIAAGGEIFHVDFKALTGKPVIVYGQT
                     EMTRDLYDARAATGARTVFELGSGFGYS"
BASE COUNT          220 a          470 c          469 g          230 t
ORIGIN      
        1 atccggccgg gccagcgccc gccgaacggc caaggcgaac atgtcctgcg ccggatcggg
       61 ccgtgcatcg gcgcgccgca tcaggccgat cgggccttcg gtcattgccg tctcgaccgg
      121 cagccgcgtc agcgtgcctt cactgatgtc gcgggccacg accccggccg agatgaacca
      181 gatggcgtcg ctgtgtcgcg tctggacgcg gccgaattcg cccgagacgc tttccacccg
      241 gcgccgcgga accgggatgc cctgcgcgat cagcaatcgt tccacgaatg gccggatggc
      301 cgaaccgggc ggcggataga tcaccggcca atcgccgatc cgccgcaggt cgggatcggc
      361 caggatcgga tggccgggcc gcaccaccac cgccacccgc tccagataaa gctgggtaaa
      421 gctgaggccg cgcatcgtct cgggcgcgcc cagccgcccg atcacggcat caagctggcc
      481 gtcgcgcagc agcgccgtca gatagccgtg cggcccgtcc gtgatgacca gccgcagatc
      541 ggcctccatg cgaccgagtt cgaccagcac ctcgggcatc aatcgcgccg cgaccgaagg
      601 cagcgccccc agtcgcatct gcgccgcccc cgcgccgccg gcctgtgcga ttcccgccag
      661 gccctgttcc agcgccgcga ggctggtctg cgcatggggc aggaagaatt cgccctcggg
      721 cgtcagcgcg ataccgccgc ggccgcgggt cagcagctcg gcgcccagga tttcctccag
      781 ttccgacagc gttcgcgaga tggccggctg ggtcagcaaa agccgccggg ccgcgccttt
      841 cagactgcgc tggcgcacga tctcggtgaa ggtctgcaag tggcggatct tgatgcgtcg
      901 gtccatgatt gcgctttctg gtaagtattc tgccacatat ctcattttac ctttcgattt
      961 ccatatgcaa gtcttgcgac cggagagggg aagggcatca tgcgcgcaca ggtcgtgatc
     1021 atcggcggcg gtccggcggg cctgcttctg ggccagcttc tgcacaggcg cggcatcgag
     1081 gccgtggtgc tggaacgcaa gacccgcgac tatgtgctgg gtcggatccg cgcgggcgtg
     1141 ctggaatcgg gactggtcgc gttgctggaa gaggccgggg tcgccaaccg gcttcgcgcc
     1201 gaaggtttcg tgcatgacgg cacccggatc gccgccggag gcgaaatctt tcatgtcgat
     1261 ttcaaggcgc tgaccggcaa gccggtgatc gtctatggcc agaccgagat gacgcgcgat
     1321 ctctatgatg cacgggcggc gacgggcgcg cggaccgtct tcgagctcgg ttccgggttt
     1381 ggctactcg
//
LOCUS       DTVW01000344            1725 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1435674, whole
            genome shotgun sequence.
ACCESSION   DTVW01000344 DTVW01000000
VERSION     DTVW01000344.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1725)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1725)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1725
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1435674"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1393)
                     /locus_tag="EYO87_04580"
     CDS             complement(<1..1393)
                     /locus_tag="EYO87_04580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009803508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long-chain fatty acid--CoA ligase"
                     /protein_id="HIC65270.1"
                     /translation="MLTDVIRAGRADLYSIFRTRAQDCARALAIEDGSRKLTYAELLE
                     RVDRLAAVFLARGVAPGDRIAILSHNRSEYLEVELAAAGIGAIVACLNWRLASDELRH
                     CIDLVAPVLAVVEPDLSEAYRAVAATPCLIIGPDLETAIAAAGPDPRIGTMVDDPEAG
                     LTILYTSGTTGLPKGALISHRAHIARSMAFAAQLALDPGDGFIAWAPMFHMASTDHGL
                     ATVLRGGTVVMVDGLQPAVINEALSRHRIGWFVMMPGALDAFIAERRANPLPLKGIKV
                     CGAMADLVPPHQIAELTALLHTPYLNSFGATETGLPPGSADLIAPGVTPDRLSKRISA
                     LCEVRLVDPDDQEVTDGTPGEMAVRGPTLFSGYWNADDANAHDFRNGFFHMGDLFRRN
                     ADGTIDFVDRAKYLIKTGGENVYPAEIERVLLSHPGVVDAAVVRAFDVKWGESPVAFV
                     ARGKDGPDAEALMN"
     gene            complement(1420..>1725)
                     /gene="fadH"
                     /locus_tag="EYO87_04585"
     CDS             complement(1420..>1725)
                     /gene="fadH"
                     /locus_tag="EYO87_04585"
                     /EC_number="1.3.1.34"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009803509.1"
                     /note="catalyzes the formation of trans-2- enoyl-CoA from
                     2,4-dienoyl-CoA; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent 2,4-dienoyl-CoA reductase"
                     /protein_id="HIC65271.1"
                     /translation="LGVSTGWILRNALRKHGVEAMGGVTYERIDDAGLHIVADGMPKV
                     IAADTIVLCTGQEPERTLAQELAARGVPVTMIGGAKEAAELDALRAIDEGVRLAQGL"
BASE COUNT          331 a          566 c          518 g          310 t
ORIGIN      
        1 aattcatcag cgcttcggca tccggcccgt ccttgccgcg ggcgacaaag gccaccggac
       61 tttcgcccca tttcacgtca aatgcccgta cgactgcggc atcgaccacc ccgggatgag
      121 atagaagaac acgctcgatc tccgcaggat agacgttctc gccgccggtc ttgatcaagt
      181 atttggcccg gtccacaaag tcgatggttc cgtccgcatt gcgccggaac aagtcgccca
      241 tgtggaaaaa gccgttgcga aagtcatggg cattggcgtc gtccgcgttc cagtaccctg
      301 aaaacaatgt cggaccccgc acagccattt cgcctggcgt tccatccgtc acttcttggt
      361 cgtcgggatc gacgagccga acctcgcaaa gtgcgctgat gcgcttggaa aggcggtccg
      421 gagtcacacc tggcgcaatt agatcggcgg accccggcgg caggccggtt tcggttgcgc
      481 cgaaggaatt cagatagggc gtgtggagaa gggctgtcag ttccgcgatc tgatgcggcg
      541 gcaccagatc ggccatggcg ccgcaaactt tgataccctt cagcggcaaa gggttggcgc
      601 gtcgttctgc gataaaggcg tccagcgcac cgggcatcat cacgaaccag ccgatccggt
      661 ggcgcgacag agcctcgttg atgaccgcag gctgcaaacc gtcaaccatc accacggttc
      721 cgccccgcag gaccgtcgcc aacccatgat cggtggacgc catgtggaac attggcgccc
      781 aggcgataaa cccgtcgccg gggtccagcg ccagctgcgc cgcaaaagcc atggatctgg
      841 cgatatgcgc gcggtggctg atgagcgcgc ccttgggcag gcccgtggtc cctgaggtat
      901 aaaggatcgt cagaccagcc tctggatcgt cgaccatggt tccgatgcgc gggtccggtc
      961 cggccgcggc aatggccgtt tccaaatccg gcccgataat cagacagggc gttgccgcga
     1021 cggcccggta agcttctgaa aggtccggtt cgacgaccgc gagaaccggc gcgaccagat
     1081 ctatgcagtg ccgcagttca tcggaagcaa gccgccagtt cagacaggcg acgatcgcgc
     1141 cgattcccgc tgcggcgagt tcgacctcca ggtattcaga gcggttgtgc gacaggatcg
     1201 caatcctgtc gcccggcgca acgcccctgg ccagaaacac ggcagccaga cgatcgaccc
     1261 gctccagcag ctcggcatag gtcaatttcc tgctgccgtc ctcgatggcc agggcgcggg
     1321 cgcagtcttg cgcgcgggtt cgaaagatcg aatacagatc agcgcgcccc gcgcggatga
     1381 cgtcggtcag catggtttac cccttgcccg gccttcggtt cagagaccct gcgccaggcg
     1441 cacgccctca tcaatggcgc gcagcgcatc cagttcagcg gcctcttttg ccccgccgat
     1501 catcgtaacc gggacgccgc gcgcggcaag ctcttgggcc agggtccgtt ccggttcctg
     1561 accggtgcat agcacaattg tatcggccgc aatgaccttt ggcattccgt ccgcgacgat
     1621 atgcagtccc gcatcgtcga tacgttcata ggtcacgccg cccattgcct cgaccccatg
     1681 tttgcgcagc gcgttgcgca ggatccaccc tgtcgaaaca ccaag
//
LOCUS       DTVW01000345            2924 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1437446, whole
            genome shotgun sequence.
ACCESSION   DTVW01000345 DTVW01000000
VERSION     DTVW01000345.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2924)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2924)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2924
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1437446"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            1..88
                     /locus_tag="EYO87_04590"
                     /pseudo
     CDS             1..88
                     /locus_tag="EYO87_04590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_878984.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(307..948)
                     /locus_tag="EYO87_04595"
     CDS             complement(307..948)
                     /locus_tag="EYO87_04595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007117786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCO family protein"
                     /protein_id="HIC65272.1"
                     /translation="MTSTTRNLRHVRLATLAAAAALLLLTGGALILRAYTPSPPSLAT
                     TVGEADVRSEFSLIDQTGTAVTEADFAGRWQLVFFGFTNCPDICPTTLAYIASVLDLL
                     GPRAEQVAPLFITVDPARDTVPVMAEYVSNFHPRLVGLTGSDAQVADAAQSFRTWYTR
                     VEEKTAPDGYLMAHAGYIYLMRPDGRFETVVQERDQPPEELARRMSTLIDESI"
     gene            complement(1010..1333)
                     /locus_tag="EYO87_04600"
     CDS             complement(1010..1333)
                     /locus_tag="EYO87_04600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007117787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65273.1"
                     /translation="MKTNTRFGLAAALAAMIAAPTAFAQDTAAPGDMKPGESMNGEMT
                     GGDMSGMQGMEGMQGMQGMEGMQGMMPMMQMMQQMGPMMAACTEMMQTMTEQMKSSAS
                     GQKEG"
     gene            complement(1360..1548)
                     /locus_tag="EYO87_04605"
     CDS             complement(1360..1548)
                     /locus_tag="EYO87_04605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009824505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65274.1"
                     /translation="MVLVGAGLWLNWGWVAAIGAAPLILALAPCAVMCGLGYCATCKS
                     KGGDADKTPADAPGATRD"
     gene            complement(1787..2314)
                     /locus_tag="EYO87_04610"
     CDS             complement(1787..2314)
                     /locus_tag="EYO87_04610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017927549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbE family thiol:disulfide interchange protein"
                     /protein_id="HIC65275.1"
                     /translation="MLLPLAVFGLVGAAFFWGLLNNNSPLPSPLIGKPVPEFTLPPIE
                     GRDDGLSSADLRGQVSLVNVWASWCVPCRAENPLMVELSKTGEVPIYGINYKDKAGEA
                     LAFLDELGDPFTRIGADLSGRVAIDWGVYGIPETFVIDAAGRVAYKHVGPFNRQILEE
                     DILPVVRKLQREAGQ"
     gene            complement(2362..2844)
                     /locus_tag="EYO87_04615"
     CDS             complement(2362..2844)
                     /locus_tag="EYO87_04615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018094861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HIC65276.1"
                     /translation="MKGRALTFTCAIAAGLATTMQFAAAQPPAAPEAITFLGEPVSAD
                     RIAQGQEIYANTCASCHGANLEGQPNWKRRLPDGRMPAPPHDQTGHSWQHPDRQLFDF
                     TKLGIGGVVAGYESDMPAFGDVLTDAEITAVLAYIKSTWPDLQRDMQAKLTAKDEEGS
                     "
BASE COUNT          496 a          959 c          943 g          526 t
ORIGIN      
        1 ggccgacgtg tatcgcccgg ccgccatcga gcagctcaag accgtggccg ggcaggccgg
       61 cgtcgagttc ttcccgtcgg acagatcgtc gtcatcatcg aaccagtcgg acaatgttgt
      121 cgtgccgcgg cggcccgggt ggcggcgcga cggtcaggtc gttgtcgcga cggcttgcgc
      181 cgaaagggcg tccgccgcgc gcaatcacgt gacccgcggg cacggtgcgc ggcgcgtccc
      241 gaccttcaag ctgcgacggg ctccgcgtcg cctccgcgac cggccattgt tgcggcaacg
      301 gcggcatcag atgctttcgt cgatcagggt cgacatccga cgggccagtt cctcgggcgg
      361 ctggtctcgc tcctggacga cggtctcgaa acgcccgtcc ggccgcatca gatagatgta
      421 gccggcatgg gccatcagat agccatcggg cgccgttttt tcttcgaccc gcgtgtacca
      481 ggtccggaaa ctctgcgcgg cgtctgccac ctgcgcgtcg ctgcctgtca gaccgacgag
      541 gcgaggatgg aaattcgaga catactccgc catcacgggc acggtgtcgc gggccggatc
      601 gacggtgatg aaaagcggcg caacctgttc ggccctgggt ccgagaagat cgagcacgct
      661 tgcgatatag gctagggtcg tcggacagat atcgggacaa ttggtgaagc cgaagaacac
      721 aagctgccag cggccggcaa aatcggcctc ggtcacggcg gtgccggtct ggtcgatcag
      781 cgagaattca gagcgaacgt ccgcctctcc gacggtcgtt gccagggatg gcggcgacgg
      841 ggtgtaggcg cgcaggatca gcgcgccgcc tgtcaaaagc agaagcgcgg ccgcagcagc
      901 cagggtcgcc agccgaacat ggcgcaggtt acgggtcgtg gatgtcatgg tcatctcatt
      961 gaaggaaggt tccgcgcggg cccggcttcg ggcccgcgcg gtatcgaggt caaccttcct
     1021 tctggcctga cgccgaggat ttcatctgct cggtcatggt ctgcatcatc tcggtgcagg
     1081 ccgccatcat cgggcccatc tgctgcatca tctgcatcat cggcatcatc ccctgcatgc
     1141 cttccatccc ctgcattccc tgcatgcctt ccataccctg catgccggac atgtcgccgc
     1201 cggtcatctc gccattcatg gattcacccg gcttcatatc tccgggggct gcggtatcct
     1261 gcgcaaaggc cgtcggcgct gcgatcatcg ccgcaagcgc ggcggcaagg ccaaatcggg
     1321 tattcgtctt catggtcgtc tccttggttg ggtttcgtct cagtccctcg ttgcacccgg
     1381 cgcgtcggcc ggggtcttgt ctgcgtcacc gcccttgctt ttgcatgtgg cgcaatatcc
     1441 gaggccgcac atgacggcac agggggccag cgccaggatc agcggtgcgg ccccgatcgc
     1501 cgcgacccag ccccagttca gccagaggcc ggccccgaca aggaccatgg cagcgaccac
     1561 caggccccgg cgatcaagcg gcagcctgaa ccgggcgggg cgggtctgtg gggtggatgt
     1621 ttcggacatg gatcggtttc tcctcgaaaa tgatgttgtc tgaaggctct cggcggcgtg
     1681 gtaccggggt ggcgcgcgcg atgatcccga cgctgccggc gcgaaggcat ccatcgcagg
     1741 tcgtcacgca gcggcgcgcc tgcaccggac aggaaaggtc gcgacatcat tgcccggcct
     1801 cgcgttgcag ctttcgcacc accggcagaa tgtcttcttc cagaatttgc cgattgaacg
     1861 ggccgacatg cttgtaggca acacgtccgg cggcatcgat cacgaaggtt tccggaatgc
     1921 cgtagacacc ccagtcgatg gccacgcgcc cggacaggtc tgctccgatg cgggtgaagg
     1981 gatcgcccag ttcgtcgaga aaggccagcg cctcgccggc cttgtccttg tagttgatcc
     2041 cgtagatcgg gacttcgccc gtcttggaaa gctcgaccat cagcggattc tcggcccggc
     2101 agggcacaca ccaggatgcc cagacgttca caagcgagac ctgtccacgc agatcagccg
     2161 aggacaggcc gtcatcgcgc ccctcgatcg gcggcagcgt gaattcgggc acgggttttc
     2221 caatcagcgg cgacggcaac gggctgttgt tgttcaaaag cccccagaag aaggccgcgc
     2281 cgaccaggcc gaagaccgcc agcggcagaa gcaggaccag ccgcccgccc cgccgccggg
     2341 gttcctgttc aagatccggg ctcatgatcc ctcctcgtct ttcgcggtga gtttggcctg
     2401 catgtcacgc tgaagatccg gccatgtgct cttgatatag gccagcacgg ccgtgatctc
     2461 ggcgtcggtc agcacgtccc cgaaagccgg catgtcgctt tcatagcctg ccacgacacc
     2521 gccgatgccc agcttcgtaa agtcgaagag ttgccggtcg gggtgttgcc agctgtgccc
     2581 ggtctggtca tgcggaggcg ccggcatccg gccgtcaggc agccgccgct tccagttcgg
     2641 ctgaccttcc agatttgcgc catggcagga cgcgcaggta ttggcataga tctcctgccc
     2701 ctgcgcgatc cggtcggcac tgacgggttc acccaggaac gtgatcgctt ccggcgcggc
     2761 aggtggctgc gcggccgcga actgcatggt cgtcgcaaga cccgccgcga tggcgcaggt
     2821 gaaggtcagc gccctgcctt tcatgccggg ctccgcagat attttaccag cgccgcgacc
     2881 gtcagcacca gtatcgcaag cacgagcagc agcagcagga cgcc
//
LOCUS       DTVW01000346            1408 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1437853, whole
            genome shotgun sequence.
ACCESSION   DTVW01000346 DTVW01000000
VERSION     DTVW01000346.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1408)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1408)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1408
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1437853"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..383)
                     /locus_tag="EYO87_04620"
     CDS             complement(<1..383)
                     /locus_tag="EYO87_04620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_353082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate kinase 2"
                     /protein_id="HIC65277.1"
                     /translation="MAKAKPSAPDLPLVGQISDYLDRGAPRDVRKTIEKAGKKEILDP
                     GYPYREEMDKTDYEDHLEMLQLQLVRMMHDISSTGKRLVVLFEGRDAAGKGGTIERLR
                     ENLNPRSCYIVALPKPTEREAGQWY"
     gene            complement(383..1309)
                     /locus_tag="EYO87_04625"
     CDS             complement(383..1309)
                     /locus_tag="EYO87_04625"
                     /EC_number="2.3.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013067646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine O-succinyltransferase"
                     /protein_id="HIC65278.1"
                     /translation="MPITLNENLPAYRILSEEGVMVMSPGRAATQDIRPLRIGLLNLM
                     PRKIQTENQFARLIGATPLQIDFQLIRMSDHESRNTAADHMESFYRPFREVAATGEKF
                     DGLVITGAPIEHLPFEAVTYWDELTQVFDWTQTHVHSTFGVCWGGMAMAWHFHGLPKH
                     ILDAKAFGCFRHRNLLAASPYLRGFSDDVLVPVSRWTEVRQDELDQRPALTTLLASDE
                     VGPCLVEDPGRRALYIFNHLEYDSTTLKDEYDRDALAGKAIEVPRNYYPDDDPARMPL
                     NRWRSHAHLLYGNWINEIYQTTQYDMSRIGTP"
BASE COUNT          236 a          421 c          474 g          277 t
ORIGIN      
        1 ctataccatt gccccgcctc gcgttcggtc ggcttgggaa gcgccacgat atagcacgag
       61 cgcggattga ggttctcgcg caggcgttcg atcgtgccgc ccttgccggc cgcatcgcgg
      121 ccttcgaaca gcaccaccag acgtttgccg gtcgaggaaa tgtcgtgcat catacggaca
      181 agctgcaact gcagcatctc cagatgatcc tcgtaatcgg tcttgtccat ctcctcgcgg
      241 tagggatagc cgggatcgag gatctctttc ttgccggcct tctcgatggt cttgcggacg
      301 tccctggggg cgccccggtc gagatagtcg ctgatctggc cgaccagcgg caggtcgggc
      361 gcggagggtt tcgctttcgc catcaagggg ttccgatcct ggacatgtcg tattgcgtgg
      421 tctggtagat ttcgttgatc cagttgccgt agagcagatg cgcatggctg cgccagcggt
      481 tcagcggcat ccgggccgga tcgtcgtcgg gatagtagtt gcgcggcacc tcgatggcct
      541 ttccggccag cgcgtcacgg tcatattcgt ccttcagcgt cgtgctgtca tattccaggt
      601 ggttgaagat atagagcgcg cggcgacccg gatcctcgac caggcagggg ccgacctcgt
      661 cgctggccag cagcgtggtc agggccgggc gctggtccag ttcgtcctgc cgcacctcgg
      721 tccagcggct gacgggaacc agcacgtcat ccgagaaccc gcgcagatag ggcgaggcgg
      781 ccaaaaggtt ccggtgccga aagcagccga aggccttggc gtccaggatg tgcttgggaa
      841 ggccgtggaa atgccaggcc atcgccatcc cgccccagca gacgccgaag gtggaatgga
      901 catgggtctg ggtccagtcg aagacttggg tcagttcgtc ccagtaggtg accgcctcga
      961 agggcaggtg ttcgatcggc gcgccggtaa tcacgaggcc gtcgaatttc tcgcccgtcg
     1021 ccgcgacctc gcggaaggga cgatagaagc tttccatgtg gtcggcggcc gtattgcggc
     1081 tttcatgatc cgacatgcgg atcaactgaa agtcgatctg caggggcgtc gcgccgatca
     1141 gccttgcgaa ctggttctcg gtctggatct tgcggggcat cagattcagc aggccgatcc
     1201 gcagcgggcg gatatcctgg gttgccgcac gccccggcga catcaccatc acgccctctt
     1261 ccgacaggat tcggtaggcg ggcaggttct cgttcagggt gatgggcatg gctgcgatcc
     1321 ttttgcgacc gataagtaga aggcagcggc ggtcacggca agatgccgtg ccgcgatggc
     1381 gggcgggcaa ggggggcgcc gccccccg
//
LOCUS       DTVW01000347            2030 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1439377, whole
            genome shotgun sequence.
ACCESSION   DTVW01000347 DTVW01000000
VERSION     DTVW01000347.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2030)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2030)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2030
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1439377"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..357)
                     /locus_tag="EYO87_04630"
     CDS             complement(<1..357)
                     /locus_tag="EYO87_04630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018001179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod modification protein"
                     /protein_id="HIC65279.1"
                     /translation="MISAISNTAGTTAQGAAGATAAPGSGTDFDTFLKMLTSQLKNQN
                     PLNPMEGTEFAVQLATFSGVEQQAQTNKLLAQMVAQMGGGGGLGQMAEMIGKEARTTS
                     AVKFGDKALTLDLSPDP"
     gene            complement(369..1628)
                     /locus_tag="EYO87_04635"
     CDS             complement(369..1628)
                     /locus_tag="EYO87_04635"
                     /inference="COORDINATES: protein motif:HMM:PF02120.14"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-length control protein FliK"
                     /protein_id="HIC65280.1"
                     /translation="MDVTSLSLPDESGTPSRPIRPAPDPAAGQVFADNVDETGEIEPA
                     PGAEAAESPEIAVEAAESDAEDGDEATDGDVAQTQVDVLQRMIEAWSGITSEIAPAAR
                     PQDRAAAETAISGTAPIVQNIVSDDRVGTNGEAMITADIPDEALPQFGPDRPRSGNTQ
                     PPSAASATIPRADSELTGGGDRTDEIQTESEGDGANRQGETARGTEGRIAETRLSADG
                     SRLSADGSGLSADGSGGNGQAASPLAQDRAAVPGPFSTDPAMLRLSDPGLISIDFSDA
                     PGQKPQLPRHDPGAAIRQIADAVVRQRDDRIEIALSPEELGRVRMTLSGRDHAPHVVI
                     WAERPEVMDMLRRNATMLIEQFIDVGVEDATLEFDHRGSGEQDRNPAGQNLPDFGDGP
                     TGLVMQTAIATSAGPWMSGLGRLDIRL"
     gene            1747..1983
                     /locus_tag="EYO87_04640"
     CDS             1747..1983
                     /locus_tag="EYO87_04640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018001181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65281.1"
                     /translation="MIGGPSGLPRPAATSADRLEQAFLEEMLKYYGPSSGQGDFGGGI
                     GEEQFGSFLSREWAGLMAERLDLGFGAMLNEGQA"
BASE COUNT          328 a          673 c          633 g          396 t
ORIGIN      
        1 cggatccggc gacagatcca gcgtcagcgc cttgtcgccg aacttgaccg ccgaggtcgt
       61 gcgcgcctcc ttgccgatca tctcggccat ctggccaaga ccaccgccgc cgcccatctg
      121 cgcgaccatc tgcgccagca gcttgttcgt ctgcgcctgc tgctcgaccc ccgaaaaggt
      181 cgcaagctgc accgcgaatt cggttccctc catcgggttc agcgggttct gattcttcaa
      241 ttgcgacgtc agcatcttca ggaaagtgtc gaaatcagtg cccgaacccg gcgcggcggt
      301 ggcgccagcg gcgccttgtg ccgtggttcc ggcagtgttg gaaatggccg aaatcatgat
      361 ctctccctct acaatctgat gtcgagccgg ccaaggccgg acatccatgg cccggccgac
      421 gtggcgatgg ccgtctgcat caccaggccc gtcggcccgt cgccgaaatc cggcagattc
      481 tgccctgccg ggttccggtc ctgttcgccg ctgccgcgat gatcgaattc cagagtcgca
      541 tcctcgacgc cgacatcgat gaactgctcg atcagcatcg ttgcattgcg acgcagcatg
      601 tccatcacct cgggccgttc cgcccagatc acgacatgcg gcgcatggtc gcgaccgctc
      661 agtgtcatgc ggacccggcc caattcttcc ggagacaggg cgatctcgat gcgatcatcg
      721 cgctgccgga cgaccgcgtc cgcgatctgc ctgatcgccg cgccgggatc gtggcgcggc
      781 agttgcggtt tctggcccgg ggcgtcgctg aaatcgatgg aaatcagacc cggatcggac
      841 agccgcagca tcgccggatc ggtggaaaag ggccccggca ccgcggcccg gtcctgcgcc
      901 agaggcgatg cggcctgccc attgcccccg gacccgtcgg ccgaaagccc ggacccgtcg
      961 gccgaaagcc tggacccgtc ggccgaaagc ctggtctcgg cgatgcgccc ctcggtcccg
     1021 cgagccgtct cgccctggcg attcgcgcca tcaccttccg attccgtctg gatctcatcc
     1081 gttcgatcgc cgccgccagt caattccgaa tcggcgcgcg gtatcgtagc cgatgccgcc
     1141 gaggggggct gtgtgttccc gctcctcggc cgatcgggcc cgaattgcgg cagggcctcg
     1201 tccggaatgt cagccgtgat catcgcctcg ccgttcgtcc ccacgcggtc atcgctcacg
     1261 atgttctgca caatcggcgc ggttccggaa atggcggttt ccgccgcggc ccgatcctgc
     1321 ggccgggcgg cgggcgcgat ttccgacgtg atgcccgacc aggcctcgat catgcgttgc
     1381 aagacatcga cctgggtctg ggccacgtcg ccatcggtcg cttcgtcgcc gtcctctgca
     1441 tcggattccg cggcttcgac cgcgatttcg ggcgattcgg cggcctctgc gccaggggcc
     1501 ggctcgatct ctccggtttc atcgacgttg tcggcgaaaa cctgcccggc tgccggatcc
     1561 ggtgccggcc ggatcggccg cgatggtgtg cccgactcgt cgggaaggga caaactggtg
     1621 acgtccatga tcttcacctc gatttttttc actcataatc gagaagcgtt accaattatt
     1681 ttacccgtga cccctagcct gacgaaatct gaaaatatcg gagtttttct gaaaatgcag
     1741 gttgagatga tcggcggtcc cagcggcctg ccacgccccg cggccacatc ggcggacagg
     1801 ctggaacagg cttttctgga ggaaatgctg aaatattacg ggccgtcgtc gggccagggc
     1861 gatttcggtg gcgggatcgg tgaggagcag ttcggcagtt ttctcagccg cgaatgggcg
     1921 ggattgatgg cggagcgcct ggatctggga ttcggcgcga tgctgaacga gggacaggca
     1981 tgaaatcgcg gtttctcagg aaattgaccg atctgaaatc ggccgtgatc
//
LOCUS       DTVW01000348            2199 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1439535, whole
            genome shotgun sequence.
ACCESSION   DTVW01000348 DTVW01000000
VERSION     DTVW01000348.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2199)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2199)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2199
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1439535"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            47..424
                     /locus_tag="EYO87_04645"
     CDS             47..424
                     /locus_tag="EYO87_04645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007427158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HIC65282.1"
                     /translation="MTAPLTALQKCTWVLGGYLLLFPRARIDVIAIFIIFFKIFTVPA
                     WLVLGAWFALQVFGGFTVAGDGGGVAYWAHSGGFIAGIVLALPLFLRRGGPRFWSRHH
                     GRPPHPAADYAPSRIPQVPRRFR"
     gene            527..1699
                     /locus_tag="EYO87_04650"
     CDS             527..1699
                     /locus_tag="EYO87_04650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011747074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--glyoxylate aminotransferase family
                     protein"
                     /protein_id="HIC65283.1"
                     /translation="MSLAAGHPAIAIPGPSPLPDRVMRAAHRASPDIYGDDLAQLNLR
                     VMAQLKRLAGTSAHLAPYIGNGHAGWEAAAINMFAPGDRALVLTSGHFGRSWAELLTQ
                     LGVEVERLDFGNAPPEAERLAQRLAEDGEGRIRAVLVCQTDTASATTADIPALRAAMG
                     DHPALLAVDAIASLGCAPMMMDDWGVDVLIAASQKGMMTMPGMAFVWFSDKAAARGKG
                     PRVTPYWDWHTRAGADALWRFWGGTPPVQHLFALDEALRMILDEEGLIATWARHAALA
                     RAVWAAAEAWGEDGCGICLSVGDPMARAASVTAMTVPGADDLREWLSQQCGVTLGIGL
                     GAAQPRNALRVAHMGHANAATIMGVLGCMEAGMTALDIAHGPGALEAAARVIAEPA"
     gene            complement(1804..>2199)
                     /locus_tag="EYO87_04655"
     CDS             complement(1804..>2199)
                     /locus_tag="EYO87_04655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(966)-N(2))-methyltransferase
                     RsmD"
                     /protein_id="HIC65284.1"
                     /translation="FAGTGALGLEALSRGAARVSFVDDGMTARALIRANVERARAKDV
                     TDLWRRDATRLGPVPDRPFGMIFLDPPYGAGLGEAAIASALQGGWIAPGAMIAWEEAR
                     GPIVPAPLVRIDQRRYGDTWVTLARLPEG"
BASE COUNT          312 a          785 c          761 g          341 t
ORIGIN      
        1 gtagaacaca aaggcggatt tggaaaattc aaacagcagc gtagcaatga cagctccact
       61 cacggcactc caaaaatgca catgggtgtt gggcggctat ctgctgctgt ttccgcgggc
      121 caggatcgat gtcatcgcca tcttcatcat cttcttcaag atcttcaccg tgccggcctg
      181 gctggtcctg ggcgcctggt tcgcgctgca ggtgttcggc ggtttcaccg ttgcaggcga
      241 tggcggcggc gtcgcctact gggcccattc cgggggcttc atcgccggaa tcgtgctggc
      301 gctgccgctg ttcctgcgcc gcgggggccc gcgcttctgg tcgcgccacc atggccgacc
      361 gccgcacccg gcggccgatt atgcgcccag ccgcatcccc caggtcccac gccggttccg
      421 ctgaggcctg gtgccgcgac gccaatgtcc cccgcgatgc gaggctggtt gactgcacgc
      481 gcgccgcatc ctaccgaatt ctgcacatcg tgaaggatcc gccaccatga gcctcgccgc
      541 cggtcatccc gccatcgcca ttcccggccc ctcgccgctg cccgaccgcg tgatgcgcgc
      601 cgcgcaccgc gcctcgcccg acatctacgg cgacgatctg gcgcaactga acctgcgtgt
      661 catggcccag ctgaagcgcc tcgccggcac ctcggcccat ctggcgccct atatcggcaa
      721 cggtcatgcc ggctgggagg ccgccgcgat caacatgttc gcaccgggcg atcgggcgct
      781 ggtgctgacc tcgggtcatt tcggccggtc atgggccgag cttctgaccc agcttggcgt
      841 cgaggtcgag cggctggatt tcggcaacgc cccgcccgag gccgagcggc tggcgcagcg
      901 tctggccgaa gacggcgagg gccgtatccg cgcggtgctg gtctgccaga ccgacacggc
      961 cagcgccacc accgccgaca ttcccgcgct gcgcgcggcg atgggcgatc acccggcgct
     1021 gctggccgtc gatgcgatcg cctcgctggg ctgcgcgccg atgatgatgg acgattgggg
     1081 cgtggatgtg ctgattgcgg ccagccagaa agggatgatg acgatgcccg gcatggcctt
     1141 cgtctggttt tcggacaagg cggcggcgcg gggcaaaggc ccgcgggtca cgccctactg
     1201 ggactggcac acgcgcgccg gggccgatgc cctgtggcgc ttctggggcg gcacaccgcc
     1261 ggtccagcat ctctttgcgc tggacgaggc gctgcgcatg attctggatg aagaggggct
     1321 gatcgcgaca tgggcccgcc atgcggcgct ggcccgggcg gtctgggccg cggccgaggc
     1381 ctggggcgag gacggttgcg ggatctgcct gtcggtcggc gacccgatgg cgcgggcggc
     1441 ctcggtcacg gccatgacgg tgccgggggc ggatgatctg cgcgagtggc tgtcccagca
     1501 atgcggcgtg acgctgggca tcggactggg cgcggcgcag ccccggaacg cgctgcgcgt
     1561 ggcgcatatg ggccacgcca acgcggccac gatcatgggc gttctcggct gcatggaggc
     1621 cggcatgacg gcgctggaca tcgcgcacgg gccgggtgcg ctggaagccg cagcccgcgt
     1681 catcgccgaa ccggcctgac cgggcgaagc gcgcgcggac agggcggggc gatatcccca
     1741 cagccgcgac gaccccgcga cgactccgcg acgggcggtc gcggcttgct gccttggcgg
     1801 atttcagcct tccggcaatc gcgccagcgt cacccatgta tcgccatatc gacgctgatc
     1861 gatccggacc agcggcgcag gcacgatcgg tccgcgcgcc tcttcccagg cgatcatcgc
     1921 ccccggggcg atccagccgc cctgcagcgc cgaagcgatg gcagcttcgc ccaggccggc
     1981 accatagggc gggtccagaa agatcatccc gaacggccgg tccgggacgg ggcccagccg
     2041 cgtggcatcg cgccgccaca ggtcggtcac gtccttcgcc cgcgcccgtt ccacgttcgc
     2101 ccggatcagc gcccgcgccg tcatgccgtc atcgacaaag ctcacccgcg ctgcgccgcg
     2161 cgacagcgcc tccagcccca gggcgccggt gcccgcgaa
//
LOCUS       DTVW01000349            1051 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1440420, whole
            genome shotgun sequence.
ACCESSION   DTVW01000349 DTVW01000000
VERSION     DTVW01000349.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1051)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1051)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1051
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1440420"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..736)
                     /locus_tag="EYO87_04660"
     CDS             complement(<1..736)
                     /locus_tag="EYO87_04660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65285.1"
                     /translation="MKRFGQIIHGSATLLFVGSSFAYAVQSRPAPLLAAFQGSDGAVV
                     LPGVPAASDAAQTLALPQLYMSPENPLMWALLIVLWLSLALDAITQLRESSEDYSFAA
                     AAGPNVVWPALSLALLAGAAWPWMVDRQNEPVLLGALFMVLATVIAARRARRSNRPAI
                     GFLAGWSTATGIAALAAILAERLGLTIAQAAVLAILPGVLIGLAAQGRIGPSITYPTA
                     LIWAFVALATTTMGSSPMIAMAAIVGV"
     gene            complement(820..>1051)
                     /locus_tag="EYO87_04665"
     CDS             complement(820..>1051)
                     /locus_tag="EYO87_04665"
                     /EC_number="6.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005794696.1"
                     /note="catalyzes a two-step reaction, first charging a
                     serine molecule by linking its carboxyl group to the
                     alpha-phosphate of ATP, followed by transfer of the
                     aminoacyl-adenylate to its tRNA; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HIC65286.1"
                     /translation="NCGDFQARRMNARYRPEGGGKPEFVHTLNGSGLAVGRTLIAVLE
                     NGQQPDGSVDLPAALHPYLGGASRLSADGTLA"
BASE COUNT          186 a          363 c          356 g          146 t
ORIGIN      
        1 agacgcccac gatcgcggcc atggcgatca tcgggctgga acccatggtc gtggtcgcca
       61 gcgcaacgaa ggcccagata agcgccgtcg gataggtgat tgacggtccg atcctgccct
      121 gcgccgcaag gccgatcagc acgcccggca aaatcgccag aaccgcggcc tgggcgatgg
      181 tcaggccgag gcgttcggcc aggatggcgg ccagggccgc gatgccggtc gcggtgctcc
      241 accccgccag aaagccgatc gctggccggt tcgaacgtcg cgcgcgcctg gccgcgatga
      301 ccgtggccag caccatgaac agcgcgccca gcaggacggg ctcgttctgc cggtccacca
      361 tccagggcca ggctgcgcct gcaagcagcg ccagcgacag ggccggccag acgacattcg
      421 gtcccgctgc ggcggcgaaa gaataatcct cggacgattc gcgaagctgc gtgatcgcgt
      481 ccagggcgag gctgagccac agaacgatca gcagcgccca catcagcgga ttttcggggc
      541 tcatgtacaa ttgcggcaac gcaagcgttt gggcggcgtc gcttgctgcc ggcacgcccg
      601 gcagtaccac cgcgccgtcc gagccctgaa acgctgccag cagcggcgcg ggacgggatt
      661 gcaccgcata ggcaaagctg ctgccgacga atagcagcgt ggcggagccg tgaatgatct
      721 ggccgaagcg tttcatggcg gcagaacgcg gcggcgggcg aatttgtttc gctgccgccg
      781 ctttgccgcc cggcaccgcc ctcgcgccgg gaagaccgct caggccaacg tgccgtcggc
      841 gctcagccgg ctcgccccgc ccagataggg atgaagcgcg gcgggcagat cgacggatcc
      901 atcgggctgc tgaccgtttt ccagcacggc gatcagtgtc cggcccacgg ccagacccga
      961 cccattcagc gtgtggacga attccggctt cccgccgccc tccgggcgat agcgggcatt
     1021 catccggcgc gcctggaaat cgccgcagtt c
//
LOCUS       DTVW01000350            1281 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1440441, whole
            genome shotgun sequence.
ACCESSION   DTVW01000350 DTVW01000000
VERSION     DTVW01000350.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1281)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1281)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1281
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1440441"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..498
                     /gene="pgk"
                     /locus_tag="EYO87_04670"
     CDS             <1..498
                     /gene="pgk"
                     /locus_tag="EYO87_04670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012178823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HIC65287.1"
                     /translation="KSLAERDMADTAREIMEKADQKGCRLYLPKDIVVAQEFKAGAES
                     EVLPVDQCPPDAMILDAGPQTVAALSDAMGLCRTLIWNGPLGAFEIAPFDGATTAAAQ
                     EAARLTREAGLISVAGGGDTVAALNKAGVAGDFTFISTAGGAFLEWMEGKDLPGVAAL
                     RDSTS"
     gene            complement(575..1072)
                     /locus_tag="EYO87_04675"
     CDS             complement(575..1072)
                     /locus_tag="EYO87_04675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65288.1"
                     /translation="MFTTTPIGRYQLSLLAASSGAPAAQIGSNQLSLFLRPITTAGET
                     AIESVPDKVEVQPEKTGFSEWLARANEYRGVANGGNSDSGVISYGSRTANEAAGNSAG
                     SDNDAVVTEGKGDKKAKDKADDVDTKKDHGKASDTNAGNDQASSAGGSGSGDPFGKWL
                     KKLFG"
BASE COUNT          223 a          392 c          408 g          258 t
ORIGIN      
        1 aagtcgctgg ccgagcggga catggccgat accgcccgcg agatcatgga aaaggccgac
       61 cagaagggtt gccggctgta tttgccgaaa gacatcgtgg tcgcgcaaga attcaaggcc
      121 ggcgcggaat ccgaggtgct tccggtcgat caatgtccgc ccgacgcgat gatcctcgat
      181 gccgggccgc agacggtggc agccctgtcg gacgcgatgg gactgtgccg cacgctgatc
      241 tggaacggtc cgctgggcgc gttcgagatc gcgcctttcg acggcgccac cactgccgcc
      301 gcgcaagagg ctgcgcgcct gacgcgcgag gccggcctga tctcggtcgc ggggggcgga
      361 gacacggtgg cggcgctgaa caaggcaggc gtggccggcg atttcacctt catctcgacg
      421 gcaggcgggg cctttctgga atggatggag ggaaaggatc tgccgggcgt cgccgcgctg
      481 cgcgattcga cgtcctgacg ccagcgagcc gtcgcaaaag atcagggcct gccgcagaac
      541 agcaggcccc gtcctttcaa gccgacgttg cggatcatcc gaacagcttt ttcagccatt
      601 tgccgaaagg atcgcccgag ccggaaccac cggctgacga ggcttggtcg ttgccggcat
      661 tggtatcact ggctttgccg tggtctttct tggtatcgac atcatcggcc ttgtccttgg
      721 ccttcttgtc gcccttgccc tcggtcacga cggcatcatt gtccgaaccg gccgaatttc
      781 cagccgcctc attggcggtc cggctgccgt aggaaatgac gcccgagtcg ctgtttccgc
      841 cattcgcgac accgcgatat tcgttcgcgc gcgccagcca ttcgctgaaa ccggtctttt
      901 cgggttgaac ctcgaccttg tcaggcacgg attcgatggc ggtttcgccg gccgtggtga
      961 tcggacgcag gaacaggctt agctgattcg acccgatctg ggccgccggg gcacccgaac
     1021 tggccgcgag cagcgaaagc tgataccgtc cgataggggt tgtcgtaaac atcagaactc
     1081 cttcacttgc tgtcttagcc cttccggtat cgggcgaccc agccattttt gcgaatgaat
     1141 tccggttaag attttattaa cgaaggcaaa ccgccttgcg atcttccctg gccggctgca
     1201 ttctggatgc gttgcgcgaa gcgcttgaac ccggtggcga tggcttctat acccggacca
     1261 gtcgcgggtg tagctcaatg g
//
LOCUS       DTVW01000351            1148 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1442587, whole
            genome shotgun sequence.
ACCESSION   DTVW01000351 DTVW01000000
VERSION     DTVW01000351.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1148)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1148)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1148
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1442587"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>1148
                     /gene="betC"
                     /locus_tag="EYO87_04680"
     CDS             <1..>1148
                     /gene="betC"
                     /locus_tag="EYO87_04680"
                     /EC_number="3.1.6.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_353669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="choline-sulfatase"
                     /protein_id="HIC65289.1"
                     /translation="GKMHFVGPDQMHGFEERLTTDIYPADFGWTPDYRKPGERIDWWY
                     HNLGSVTGAGVAEITNQYEYDDEVAYNACRKLYDLSRGQDDRPWCLTVSFTHPHDPYV
                     ARRKYWDLYDGAPELAAPEAIAYQDQDAHSQRLMDACDWREFDITDRDIRRARQGYFA
                     NISYIDDKIGEVLDVLERTRQEAIILFLSDHGDMLGERGLWFKMSFYEGSARVPLMIA
                     APSMQPGRVDRPVSTIDVLPTLCDLAGLPMDEIAPWTDGESLADGGASRNPVPIEYAA
                     EGSITPLVAIRDGGWKYTACKADPEQLFDLQTDPDERVNLAGDPAHAATLQHLRAMAR
                     DRWDLDAYDSEVRQSQARRWIVYEALRNGAYYPWDYQPLMQASERYMR"
BASE COUNT          224 a          352 c          370 g          202 t
ORIGIN      
        1 ggcaagatgc atttcgtcgg gcccgaccag atgcacgggt tcgaggaacg gctgaccacc
       61 gacatctacc cggccgattt cggctggacg ccggattacc gcaagccggg cgaacggatc
      121 gattggtggt atcacaatct gggctcggtc accggcgcgg gcgtggccga gatcaccaac
      181 cagtacgaat atgacgacga ggtcgcctat aatgcctgcc gcaagcttta cgacctgtcg
      241 cgcgggcagg atgaccggcc gtggtgtctg accgtcagct tcacccaccc gcatgacccc
      301 tatgtcgcac ggcgcaaata ctgggatctc tatgacgggg cgccggaact ggccgcgcca
      361 gaggccatcg cctatcagga tcaggacgcg cattcacagc gattgatgga tgcctgcgac
      421 tggcgagaat tcgacatcac cgatcgcgac atccgccgcg cgcgccaggg ttatttcgcc
      481 aatatcagct atatcgacga caagatcggc gaggttctgg acgtgctgga acgcacgcga
      541 caggaggcga tcatcctgtt cctgtccgat catggcgaca tgctgggcga acgcgggctg
      601 tggttcaaga tgagctttta cgaaggctcg gcgcgcgttc cgctgatgat cgcggcgccg
      661 tcgatgcagc cggggcgtgt ggatcgcccg gtcagcacca tcgacgtgct gccgactctt
      721 tgcgatctgg caggactgcc gatggacgag atcgcgccct ggaccgatgg cgaatcgctg
      781 gccgatggcg gcgcgtcgcg caacccggtg ccgatcgaat acgcggccga gggcagtata
      841 accccgctgg tcgcgatccg cgacggcggc tggaaataca ccgcctgcaa ggccgatccc
      901 gaacaattgt tcgatctgca gaccgatccg gacgagcgcg tcaatctggc gggcgatccg
      961 gcccatgccg caaccttgca gcacttgcgg gcgatggcgc gggatcgctg ggatctggat
     1021 gcctatgatt ccgaggttcg gcaaagtcag gcacgacgct ggatcgtcta tgaggccctg
     1081 cgcaacggcg cgtattatcc gtgggactac cagccgctga tgcaggcctc cgaacgatac
     1141 atgcgcaa
//
LOCUS       DTVW01000352            1588 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1442687, whole
            genome shotgun sequence.
ACCESSION   DTVW01000352 DTVW01000000
VERSION     DTVW01000352.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1588)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1588)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1588
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1442687"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..745
                     /locus_tag="EYO87_04685"
     CDS             <1..745
                     /locus_tag="EYO87_04685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012318082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ArgE/DapE family deacylase"
                     /protein_id="HIC65290.1"
                     /translation="LLQGYTADAVLIPEPEDEMLVRANTGVLWFQVQVRGVPVHVREM
                     GEGANAIDGATRIIAALREMEADWNADKDRHPHFEKEAHPINLNIGKIEGGDWASSVP
                     SWCRIDCRVSIYPGRSAGDAADEITARVAAFAKADRFLANNPPRVVFNGFYAEGYVLE
                     PGSEAEAVLGRAHETAIGAPLQSFMTAGYLDTRVHALYNRIPALCYGPVARNIHGIDE
                     CVSLTSVRRVTQAMALFVAEWCGVEPVQT"
     gene            745..>1588
                     /locus_tag="EYO87_04690"
     CDS             745..>1588
                     /locus_tag="EYO87_04690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008230160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside phosphotransferase"
                     /protein_id="HIC65291.1"
                     /translation="MRDTGPRSLVGLSGTAVAPDLLDHAAPAVTSAQAAELAAEIFGV
                     CGDVQWLSAEKDANFRITPAKGPPVLLKITNAAEDRGVTEMQTAALMHLGRVDTTLPV
                     PHIRPTLTGRAAHILSIPGGQSHMVRLLTYLEGTTLGQALSATGLHQDIGALLARLTI
                     GLRGFDHPAARHMLQWDIKRAHHLRPMLEAVEDGRLRGRLTRLIDRFDAEIAPRLCGL
                     RAQVVHNDFNPHNLLVDAPRATRLTGIIDFGDMVHTPLVCDLAVACSYQIGDGPRPIE
                     AIGRL"
BASE COUNT          270 a          546 c          519 g          253 t
ORIGIN      
        1 ccttcttcag ggctataccg ccgatgcggt gctgatcccc gaacccgagg acgaaatgct
       61 ggtgcgtgcg aataccggcg tcctgtggtt tcaggtgcag gtccgcggcg tgccggtgca
      121 cgtgcgcgag atgggcgaag gcgccaacgc catcgacggc gccacccgca tcatcgccgc
      181 gctgcgcgag atggaggcgg actggaacgc cgacaaggac aggcaccccc atttcgaaaa
      241 ggaagcccat ccgatcaatc tcaatatcgg caagatcgaa ggcggcgact gggcctcgtc
      301 cgtgcccagc tggtgcagga tcgactgccg ggtatcgatc tatcccggcc gcagcgccgg
      361 ggatgccgcc gacgagataa ccgcgcgtgt cgcggccttc gccaaagccg acaggttcct
      421 ggccaacaac ccgccccgag tggttttcaa cggcttctac gccgaaggtt acgtgctgga
      481 accgggcagc gaggccgagg cggtgctggg ccgtgcgcat gaaaccgcca tcggcgcgcc
      541 gctgcaatcc ttcatgacgg ccggttacct cgatacgcgg gtccatgcac tctacaaccg
      601 gatccccgcg ctctgctatg ggccggtcgc gcgcaatatc cacggcatcg acgaatgcgt
      661 cagcctgact tcggtcagac gggtcacgca ggccatggcg ctgttcgtcg ccgaatggtg
      721 cggcgtcgaa ccggtgcaga cctgatgcgt gacacgggcc cccgatcctt ggtcgggctg
      781 tccggaacgg cggtcgcgcc cgacctgctg gaccatgcgg cacctgcggt gacgtccgcg
      841 caggcggcgg aactggcagc ggagatcttt ggtgtctgcg gcgatgtgca atggctcagc
      901 gccgaaaagg acgccaattt ccgcatcacc cccgccaaag gcccgccggt cctgctgaaa
      961 atcaccaacg ctgccgaaga ccgcggcgtg accgagatgc agaccgccgc cctgatgcat
     1021 ctgggcaggg tcgataccac gctgcccgtg ccccatatcc ggccaaccct gaccgggcgg
     1081 gccgcccaca tcctgtcgat ccccggcggg caaagccata tggtccgcct gctgacctat
     1141 ctggagggga cgacgcttgg gcaggccctg tccgccaccg gcctgcacca agatatcggc
     1201 gcgctgctgg cccggctgac gatcgggttg cgcgggttcg accatcccgc ggcccggcat
     1261 atgctgcaat gggacatcaa gcgcgcgcac cacctgcgcc cgatgctgga ggcggtcgag
     1321 gacggccggt tgcgagggcg gctgacgcgg ctgatcgacc gcttcgacgc cgaaatcgcg
     1381 ccgcgccttt gcggcctgcg cgcccaggtc gtgcacaacg atttcaatcc gcacaacctg
     1441 ctggtcgatg ccccccgcgc cacccgcctg accgggatca tcgatttcgg cgatatggtg
     1501 cacacgcctc tggtctgcga tctggcggtg gcctgttcct accagatcgg cgacggaccg
     1561 cgcccgatcg aggcgatcgg gcggctgc
//
LOCUS       DTVW01000353            1033 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1443238, whole
            genome shotgun sequence.
ACCESSION   DTVW01000353 DTVW01000000
VERSION     DTVW01000353.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1033)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1033)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1033
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1443238"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(108..755)
                     /gene="rimP"
                     /locus_tag="EYO87_04695"
     CDS             complement(108..755)
                     /gene="rimP"
                     /locus_tag="EYO87_04695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014881498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimP"
                     /protein_id="HIC65292.1"
                     /translation="MSNDLIAKTAIDRRLAEIITPVIEDLGFELVRVRLQGGKTATLQ
                     IMADRPEGGINVEDCGDISVAVSATLDVEDPIEDAYHLEVSSPGIDRPLTRLKDFATF
                     EGYEAKLETNQPIDGRKRWKGVLAGVESGDAGDEVLLNIEEAGEIQTIGLNFDWLSDA
                     KLVLTDELIREMLRQKKEAGIAIDNLDESAFDAVETEDDGGTDENEGAERADTKE"
     gene            complement(888..>1033)
                     /locus_tag="EYO87_04700"
     CDS             complement(888..>1033)
                     /locus_tag="EYO87_04700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007967145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tryptophan-rich sensory protein"
                     /protein_id="HIC65293.1"
                     /translation="VVAALVTLAFRLDAVAAVMLLPYLAWLCVAAALNWRIWQDNPGA
                     GGV"
BASE COUNT          168 a          356 c          306 g          203 t
ORIGIN      
        1 tcctccatcg cctcgatgac cagttccggc tcgatcatct tctcgcgcgc gaccgcctcg
       61 gcggtttgca gaagttccag ctgattggca gaggtgatcg ccatcactta ctccttggta
      121 tcggcgcgct cggcgccctc gttttcgtcg gttccgccat cgtcttcggt ttccaccgcg
      181 tcaaaggcgc tttcgtccag gttgtcgatc gcgattccgg cctctttctt ctggcgcagc
      241 atttcgcgga tcagttcgtc cgtcagcacc agtttcgcat ccgagagcca gtcgaaattc
      301 agcccgatcg tctggatctc gccggcctct tcgatgttca gcagaacctc gtcgcccgca
      361 tcgcccgatt cgacgcccgc cagcacgccc ttccagcgtt tgcggccgtc gatcggctgg
      421 ttcgtctcca gcttggcctc atagccctcg aatgtcgcga aatccttcag ccgggtcagc
      481 ggccggtcga ttccggggct gctgacctcc aggtgatagg cgtcctcgat cggatcctcg
      541 acatccagcg tggcactgac cgcgaccgag atgtcgccgc aatcctccac gttgatgccg
      601 ccttccggcc ggtcggccat gatctgcaag gtcgctgtct tgccgccttg cagacgcacg
      661 cgcaccagct cgaagcccag atcctcgatc accggggtga tgatctcggc caggcgccgg
      721 tcaatggcgg tcttggcgat caggtcgttc gacatggcgt ccttcggatg gaaaaaaggg
      781 cccgcagcgg gcccaagcag aagcgtccgg tgggcagggg gtggaagcct gcaccgctgt
      841 caagcaggca tatagacccc tgaggcgggg attgcaagcg gggcgtgtca gaccccgccg
      901 gcacccggat tgtcctgcca gatgcgccag ttcagcgccg ccgccacgca tagccaggca
      961 agatagggca gcagcatgac cgcggccacc gcgtccagcc ggaaagccag cgtgaccagc
     1021 gccgccacga cca
//
LOCUS       DTVW01000354             954 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1443399, whole
            genome shotgun sequence.
ACCESSION   DTVW01000354 DTVW01000000
VERSION     DTVW01000354.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 954)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 954)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..954
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1443399"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            100..693
                     /locus_tag="EYO87_04705"
     CDS             100..693
                     /locus_tag="EYO87_04705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008968008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HIC65294.1"
                     /translation="MHRTIRYLSHPQVVIDPTKPIPDWSLSEVGLGRIAALAASDALT
                     GTRHVISSAETKAIETATPLAKSLGCRLKVREAMHENDRSATGFLPPDEFESVVDQFF
                     GCPEESVRGWETARAAQARIVAEVQDCLRNCETGDVLFVGHGGVGTLLFCYLSGDPIS
                     REFDQGANGGGCFFEFSGPQGKPNSRWQPFETLINQD"
BASE COUNT          191 a          271 c          287 g          205 t
ORIGIN      
        1 gatgacggcc ttggccgggg accggacaac ggccgcaccg cgcatgatcg gcgggaaagc
       61 gggacttcgc aaccattcgc aatttgatat gattcggcca tgcatcggac cattcgatat
      121 ctttcgcacc cgcaagtcgt cattgatccg accaagccga tccccgactg gtcgctaagc
      181 gaggtaggcc taggacgcat tgcggccctt gcagcgtctg acgcactaac tggcacccga
      241 catgtgatca gcagcgccga aaccaaagca attgaaacag cgacgccctt ggccaaatca
      301 ctcgggtgcc ggctgaaggt gcgggaggca atgcacgaga atgatcgcag cgcgactggc
      361 tttcttccgc cagacgagtt tgagtccgtt gtggatcaat tttttggctg tccagaggaa
      421 agcgtgcggg gctgggaaac cgcaagggcg gctcaagccc gtattgtcgc agaggttcag
      481 gattgtttgc gcaattgcga gacaggcgac gttctgttcg ttggtcacgg aggcgtcgga
      541 acgctcttgt tttgctatct ctccggcgat cccattagcc gtgaattcga tcagggcgca
      601 aatggcggcg ggtgtttttt cgaattttcc ggcccacagg gaaagccgaa ttcgcgatgg
      661 cagccgtttg aaaccttgat caatcaagat tgaggcacat tggtgctatc gcggattcaa
      721 ggccgccatt cgcggccgtc cggccccatg attgcaatgc gaaagcgcgt tgccgattcc
      781 cttccgtctc gcctgtttga gaagacttac ctatgaccct ccctctcctg cgcaggggcc
      841 tctggcagcc gcctcgatct cgccatggta gcaatcgatc atttaggggc gcgacctagc
      901 gggacggcgg agtgaaacgg ttcagccgtc gcggtagcgt ccgtgtcggc tctc
//
LOCUS       DTVW01000355            1613 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1443740, whole
            genome shotgun sequence.
ACCESSION   DTVW01000355 DTVW01000000
VERSION     DTVW01000355.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1613)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1613)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1613
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1443740"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..471)
                     /locus_tag="EYO87_04710"
     CDS             complement(<1..471)
                     /locus_tag="EYO87_04710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65295.1"
                     /translation="MSVKVAAHDLKLFAAEAYWTLHSEMGRQFLGERARKSMTIIKQF
                     REAQFKLAAAQKISTKAMRALPAAEKAEAEAIAIRDLARPKLDAPKALVRDKTQTHAK
                     TNKGLADATRKMDEDCSKTNQAYLNLENAVQSRQMPALRRVAEAQLELLRLKGNE"
     gene            complement(525..791)
                     /locus_tag="EYO87_04715"
                     /pseudo
     CDS             complement(525..791)
                     /locus_tag="EYO87_04715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010395842.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(831..>1613)
                     /locus_tag="EYO87_04720"
     CDS             complement(831..>1613)
                     /locus_tag="EYO87_04720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011048929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HIC65296.1"
                     /translation="FVIAAALIAAFAFAAGPGVPRTAFRAPWRYLLLGGVFASYFVLM
                     FQGLKTAAPVSASAVFTLTPLMAAGFGWLLMRQRLTGRMAAALALGGAGALWVIFRGD
                     PAAMARLEFGRGEGIYLAGCVAHALYTPLVRRLNRGESPVVFSLGTLLAGAGVLILWG
                     WGPIWATDWTALPGIVWITLLYVAILASAVTFVLVQYATLRLPAAKVMAYTYLTPVWV
                     IVLEAAMGQGLPGSVVAPGIGATLLALWMLLREDEPASLRQP"
BASE COUNT          301 a          541 c          494 g          277 t
ORIGIN      
        1 ttcattacct ttgagacgta aaagctccag ttgtgcttcg gcaacgcggc gcagcgcggg
       61 catctggcgg gattgcactg cgttttccaa attcaaataa gcctgattgg ttttggagca
      121 atcttcatcc attttgcgtg tagcatcggc gagccccttg tttgtctttg cgtgggtttg
      181 tgttttgtcc ctaacgagcg ctttcggagc atcaagtttg ggcctggcaa gatcgcgaat
      241 agctatggct tcggcctctg ctttttcagc agctggcagg gcgcgcatgg ctttggttga
      301 tattttttgg gcggccgcca gcttgaattg tgcctcgcgg aattgtttga taatggtcat
      361 cgatttgcgc gcgcgctcac caaggaattg ccggcccatt tctgaatgca gcgtccaata
      421 cgcctcggcg gcgaacagct tcaaatcgtg cgcggcgacc ttcaccgaca tacagaactc
      481 tagcaagacg tcggcgggat ggacgacgga tcgctgccct cgcccagatg gcccagcatc
      541 ggcgtcggca ggtccagttc cttgcgcttc acgaaggcgg cgcggttttc cagatagcgg
      601 ccgaaactgc gctggcgcac gtccagatcc agcccgccga cgcgatgtcc catccgcgcc
      661 agagcggtcg ccacatgcat cgaggtcgtg gacttgccgg acccgccctt ttcgttgccc
      721 acgacgatga tatgcgccac ggatcgcctc ttcttgcctt cgttcggccg gaccctagcg
      781 gcgcgccgca aggaaggaaa gcgggccttc acggaaagct cacgcctgcg tcagggctgc
      841 cgcagggatg ccggttcgtc ctcgcgcagc agcatccaca gcgccagcag ggtggcgccg
      901 attcccggtg ccacgacact gcccggcagg ccctgcccca tcgcagcctc cagcacgatg
      961 acccagaccg gcgtcagata ggtataggcc atgaccttcg cggcgggcag gcgcagcgtc
     1021 gcgtattgca ccagcacgaa ggtcacggcg ctggcgagga tcgcgacata aagcagcgtg
     1081 atccagacga tgccgggcag ggccgtccag tccgtcgccc aaatcggccc ccagccccac
     1141 aggatcagca cccccgcccc ggccagaagc gtgccgagac tgaacacgac gggactttca
     1201 ccccggttca gccgtctgac cagcggcgtg tagagggcat gggccacgca accggccaga
     1261 tagatcccct cgccgcgtcc gaattccagc cgcgccatcg cggccggatc gccgcgaaag
     1321 atcacccata gcgcgccggc gccgccaagg gccagcgccg cggccatgcg gcccgtcagc
     1381 cgctgccgca tcagcagcca gccaaagccc gccgccatca gcggcgtcag cgtgaagacc
     1441 gcgctggcgc tgaccggggc cgcggtcttc aggccctgga acatcagcac gaaatagctg
     1501 gcaaagaccc cgcccagcag cagatagcgc cagggcgcgc gaaacgccgt ccgcggcacc
     1561 cccggaccgg cggcgaaggc gaaagccgcg atcagcgcgg cggcgatcac aaa
//
LOCUS       DTVW01000356            1943 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1445563, whole
            genome shotgun sequence.
ACCESSION   DTVW01000356 DTVW01000000
VERSION     DTVW01000356.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1943)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1943)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1943
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1445563"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..342)
                     /locus_tag="EYO87_04725"
     CDS             complement(<1..342)
                     /locus_tag="EYO87_04725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009816921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="HIC65297.1"
                     /translation="MLGIGSMAKKVFGTPNDRKVKSTRPLVARINALEEDFKALSDDG
                     LIEKTREFQNRVRDGESLDAILPEVFANCREAARRALGLRAFDVQLMGGIFLHQGNIA
                     EMKTGEGKTLVA"
     gene            547..1392
                     /locus_tag="EYO87_04730"
     CDS             547..1392
                     /locus_tag="EYO87_04730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020040522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HIC65298.1"
                     /translation="MLKRSILAAVIAAPLMVPALAMAQDQTADTVVATVNGQDITLGE
                     MIVMKQTMQQDPQTANMPDQALWDMMLDQLIRQAAVAETGTESAGVRAQIELQKRNVL
                     AAEAVGKIAEPQPGEDEVKAAYDKLFGNAEAKTEYSAAHILVDSEDKAKDLKKQLDEG
                     ADFGKLAEENSTGPSGPNKGDLGWFTADQMVPEFSDAVKGLEKGQVSDPVQTQFGWHV
                     IKLNDTRVKEAPKLDEVRDQVVQMVRRQKVEAAIEKITSDAKVEKTEGLDPALLNETA
                     LLDAQ"
     gene            1392..>1943
                     /locus_tag="EYO87_04735"
     CDS             1392..>1943
                     /locus_tag="EYO87_04735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009825754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional ornithine
                     acetyltransferase/N-acetylglutamate synthase"
                     /protein_id="HIC65299.1"
                     /translation="MGKAGQPVSPLAPARFPDLPVIAGVEFASGAAGVKYQGRTDVTL
                     IRIAPGSAIAGAFTRSSTRAACVLDNQAKLASGGDAPDGAAIIVNSGNANAFTGARGQ
                     ESVDAVTGAVASALNMPASRVFSSSTGVIGEPLPHERILAIIDNLKAGLSRRGIADAA
                     RAIMTTDTFPKGASAILNQPVHIN"
BASE COUNT          370 a          616 c          636 g          321 t
ORIGIN      
        1 ggcaaccagg gtcttgccct cgccggtctt catttcggcg atattgccct gatgcaggaa
       61 gatcccgccc atcagctgca cgtcgaaggc gcgcaggcca agcgcgcggc gcgccgcctc
      121 gcggcaattg gcaaagacct cgggcaggat cgcgtcaagg ctttcgccgt ccctgacgcg
      181 gttctggaac tcgcgggtct tctcgatcag cccgtcatcg gacagcgcct tgaaatcctc
      241 ttccagcgcg ttgatccggg caaccagcgg ccgggtcgat ttaaccttgc ggtcgtttgg
      301 cgtgccaaag accttcttcg ccatagaacc aatgccgagc atgtcacctt cgcaatcacg
      361 ttgttgggaa aggctgtcag aagcgggcca cttgcccccg ccttccgcat tgccgtatca
      421 gggggccgaa cgaagccggc ggcggcacct tccgcgttcc gtggggattt atgcctcgtc
      481 cgcctgactg tcaacgctgg cccggtcccg ggatggggcc gcgccgcgac atgcaaagga
      541 acttccatgc tgaaacgttc gattcttgcg gccgtcatcg cggcgcctct gatggttccc
      601 gcccttgcca tggcgcagga tcagaccgcc gacacggtcg ttgccaccgt caacgggcag
      661 gacatcacgc tgggcgagat gatcgtgatg aagcagacca tgcagcagga tccgcagacc
      721 gcgaacatgc ccgaccaggc actctgggac atgatgctgg accagttgat ccgtcaggcc
      781 gccgtggccg aaaccggcac cgagagcgca ggcgtccgcg cccagatcga gttgcagaaa
      841 cgcaacgttc tggccgccga ggcagtcggc aagatcgccg agccgcagcc cggcgaggac
      901 gaggtcaagg ccgcctatga caagctgttc ggcaatgccg aggcgaagac ggaatattcg
      961 gccgcccata tccttgtcga cagcgaggac aaggccaagg atctgaagaa gcaactggat
     1021 gagggcgccg atttcggcaa gttggccgaa gagaattcga ccggtcccag cgggccgaac
     1081 aagggcgatc tgggctggtt caccgccgat cagatggtgc cggaattctc ggacgccgtg
     1141 aaggggctgg aaaagggcca ggtctcggat ccggtccaga cgcagttcgg ctggcatgtg
     1201 atcaagctga acgacacccg cgtgaaggaa gccccgaagc tggacgaggt cagggatcag
     1261 gtggtgcaga tggtgcggcg ccagaaggtc gaggcggcga tcgaaaagat cacctcggat
     1321 gccaaggttg aaaagaccga ggggctggat ccggcgctgc tgaacgagac cgcccttctg
     1381 gacgcgcaat gatgggcaag gcggggcaac ctgtctcgcc gctggctccg gcgcgctttc
     1441 ccgatctgcc ggtcattgcc ggcgtcgaat tcgccagtgg cgcggccggc gtcaagtatc
     1501 agggtcgcac ggatgtgacc ctgatccgca tcgcgccggg atccgcgatc gccggggcct
     1561 ttacccggtc ctcgacgcgg gccgcctgcg tgctggacaa ccaggccaag ctggcctcgg
     1621 gcggcgacgc acccgacggc gcggcgatca tcgtcaattc cggcaatgcc aatgccttca
     1681 ccggcgcgcg tgggcaggaa tcggtcgatg ccgtgaccgg cgccgtggca agcgcgctga
     1741 acatgccggc aagccgggtg ttttcatcct cgaccggcgt gatcggcgag ccgctgccgc
     1801 atgaacgcat cctcgcgatc atcgacaacc tgaaggcggg gctcagccgg cgcgggatcg
     1861 ccgatgccgc gcgcgcgatc atgactacag atacctttcc caagggggcc tcggccatcc
     1921 tgaaccagcc ggttcatatt aac
//
LOCUS       DTVW01000357            8905 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1447557, whole
            genome shotgun sequence.
ACCESSION   DTVW01000357 DTVW01000000
VERSION     DTVW01000357.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 8905)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8905)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8905
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1447557"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(122..424)
                     /locus_tag="EYO87_04740"
     CDS             complement(122..424)
                     /locus_tag="EYO87_04740"
                     /inference="COORDINATES: protein motif:HMM:PF05016.13"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HIC65300.1"
                     /translation="MPSYGLTLAAEKDLRGIWRYTCDRWGFDQAETYFSQIEACCEAV
                     GRGTACWKMLDGLPNDVRIHRCKRHYIVWLEAERPIIIAILHERMNFVRRLKDRLS"
     gene            complement(430..696)
                     /locus_tag="EYO87_04745"
     CDS             complement(430..696)
                     /locus_tag="EYO87_04745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006271806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antitoxin"
                     /protein_id="HIC65301.1"
                     /translation="MPRLSIDITPEEHQKLKAIAALKGESIKDYVLKRTLGDAPALDD
                     MSEGEAVAALADFLKPRIDQARRGELSTKSMADIRREAHEQAGL"
     gene            complement(1003..1722)
                     /locus_tag="EYO87_04750"
     CDS             complement(1003..1722)
                     /locus_tag="EYO87_04750"
                     /inference="COORDINATES: protein motif:HMM:TIGR03370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VPLPA-CTERM sorting domain-containing protein"
                     /protein_id="HIC65302.1"
                     /translation="MFWTRIGAILTAILFATTVNAATVKEIRLDLGFLGTTYFDASVY
                     DVSGCTPSDDLGDCGQVLFDGSDTFLSQADDVWGLPRILPFTPGQRVSFTARLNVPDP
                     GTTETGSVDSCQLGGIDCGSATQVQADDSSFSLLYGVSAVLGGNLTPGSSVFFREDSL
                     PLGAGPFAQTTTSGDLAIWRLWQGNFTVLEPSLPPVSAVPLPASVLLLPLGLAALGSQ
                     RRKRRGPAAGRMDRRRKASAS"
     gene            1960..3375
                     /locus_tag="EYO87_04755"
     CDS             1960..3375
                     /locus_tag="EYO87_04755"
                     /inference="COORDINATES: protein motif:HMM:PF13440.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis protein"
                     /protein_id="HIC65303.1"
                     /translation="MHRLTFLSGDGLRHRALRGTAVTLGGVGGQQFLRLASNLILTRL
                     MFPEAFGLMALIQTFMVGLQMFSDIGIGPSIIQNRRGEDPDFLNTAWTIQIIRGTILW
                     LLSCALAWPLARFYDEPQIFWLMPVVGLSALITGFRSTKNAVANRNMQLGLQTAIALA
                     SQAAGLVVMIVLAWMTSSVWSLVIGGLVSGFLSVWAGHRFLPGMSNTFRWERGAVRDL
                     IGFGKFIFISTLAGFFVNQGEKVVLGKLVSLADLGIYNIGFFMASFPTMLGSMIAGRI
                     LFPLYREIRPSESLPNRRKIRRARNLLTGSMIALFGTLAISGNFLIGFLYDPRYAAAG
                     PMLIIMAIMQIPAALTMGNAQLLLAEGDSRRFSHLTLIQAGLNFILLFGGFWLIGMAG
                     VLLIRGLSIIGIYPLQQIYLSRYHGTDLRRDAVFLLIGALFSAIAIWVNWDVLAEFGR
                     VSVSLAPAVTGNWYPKNLFGG"
     gene            complement(3376..4407)
                     /locus_tag="EYO87_04760"
     CDS             complement(3376..4407)
                     /locus_tag="EYO87_04760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019298140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HIC65304.1"
                     /translation="MPRGDRGRRLEGAGCDRAAENASFLVDAVVIGRNEGVRLIRCLD
                     SMKRADLRRIVYVDSGSTDGSIAEAESRGVEVLRLDLSVPFTAARARNAGLDRLRRQG
                     GVRADLVQFIDGDCELDPGWIGRARAFLQANPGVAGTGGRCRERFPGASVYNRFCDRE
                     WDTPVGEARALGGNAMFRMAALDQVGGFDPALIAGEEPELCVRLRARGWTIRRIDGEM
                     VLHDAAMTRFGQFWKRARRAGFAFAQGYAMHGAAPERHYAAPLRRAILWGAVLPAAAF
                     LGAVAIHPVFLALLLLWPAQILRLWRRDGDGPRAALLTIAKIPEALGAFQYLFARLFR
                     RKARLIEYK"
     gene            complement(4407..5876)
                     /locus_tag="EYO87_04765"
     CDS             complement(4407..5876)
                     /locus_tag="EYO87_04765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65305.1"
                     /translation="MVSMLAVLFWPVVVFWLFATRKPAQALAASILGGYLFLPENYAI
                     DLPAVPSLDKNSIAGLAAVLASAIFLKGPAIRDLPEGMVMPGIVPGSRAVRILLAVLL
                     IGMAGTVVSNGDPVSYGPRWLPGLRFYDMLSFMGNMLFSLIPFLLARKYLAHPQAHIA
                     LLVSLAVFGLIYTLPALYEIRMSPQLSRMIYGYFPHAWLQHIRAGGYRPVVFLNHGLW
                     LAIFLSVSFLAALTLWRLSSGPLRMRWLLASLWLLMTLILAKGMGALGIGILLGATIL
                     LMPVRLHILMAASISVIVLVYPMLRGAGWIPVDTVVSTARDLDPARAASLSFRLENED
                     ILLAKANERPLFGWGGWGRNRVYNDNGVDISVTDGYWVQAMGVRGWTGYLAEMGLLAI
                     PLVLLALRWRGLALTSATAGLALVLTANLIDLIPNATLTPVTWLLAGALAGRLELGRI
                     RETAPGDAAEAIPLRRNRYSRQTGLRARRQAAVPPPGPQ"
     gene            complement(5889..6842)
                     /locus_tag="EYO87_04770"
     CDS             complement(5889..6842)
                     /locus_tag="EYO87_04770"
                     /inference="COORDINATES: protein motif:HMM:PF04230.11"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65306.1"
                     /translation="MSTAETMKGPHGHDYGPVAQALRECGPEPIIYVPNPGNAGDGLI
                     ALGTYILFEKLGISWQIGRSDGVYPDRSVVYGGGGSLIELYPRAIDFLKSNHPVCRRL
                     VLLPHTIRAFGDVIAAMDDRCTLFARDKDSHAYLSGLGGTARTGLGHDMAFMISRDDL
                     VSRRLDPGFLSRPGIRIAWLKMVTKILWHLRFRDSRLHAMRGDREAPGGDLPAANFDL
                     SAMFSSGHLNGVSDAHMSPAACATTAKILQLILERASLVETNRLHIAVLSAVLGRNLV
                     MRDNSYGKNRGVYDHSMKDVFPDIAFQAEEAAGARALSQGR"
     gene            complement(6839..7963)
                     /locus_tag="EYO87_04775"
     CDS             complement(6839..7963)
                     /locus_tag="EYO87_04775"
                     /inference="COORDINATES: protein motif:HMM:PF13692.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HIC65307.1"
                     /translation="MDDRLKIGFFCAHDPYDRRSFSGTPSYMLDALGRRDDIVLRVLG
                     PYRRGYRGKLLSAWRRWRKTPLRGPEAGAVKELDWVIVPVSSRFIPERRGGAGPKFVH
                     VTDATPQFLRDFYARPTSRQADLVEQTALERADLVVYSSGYMAGRALAEFGGADAAKI
                     HAISFGLNLDVLPPPPGAKPPPDPLKLIFIGKNWQTKGGIIAAEANEILNRRGIASEL
                     TVIGGRPDDPSRYGNARFLGYLDKGRAKDYRLLTRSLSQAHLFVLPTQADCTPMVVAE
                     ANAHGVPAVINEIGGISSLVREGENGFLMDPGSDAAAYADKIARILSDRPGFDALAAG
                     SYEYCRNNLTWDAWARDMIALIRRDPEKARHSRIAGREAG"
BASE COUNT         1618 a         2939 c         2852 g         1496 t
ORIGIN      
        1 cgatccaact tctgaccggt ccttgggaac ctccatcctt tcgacccgtc ccccgccgct
       61 ctccggcatg tgtgaggtgc cggagagcgg ctcctgtatc gcacaggagc cgggaccgat
      121 ctcaagacaa gcggtccttc aatcgccgca cgaagttcat gcgctcatgc agaatcgcga
      181 tgatgattgg gcgctcggct tcgagccaga cgatgtagtg acgcttgcaa cggtggatgc
      241 gaacatcatt cggcaagcca tcgagcatct tccagcaagc ggttcctctc cccacagctt
      301 cgcaacacgc ctcgatctgg ctgaaatatg tctcggcctg atcgaagccc caccggtcgc
      361 aagtgtagcg ccagatgccg cgcaaatcct tttcggcggc aagcgtgagg ccataggacg
      421 gcacaggggc taaagccccg cctgctcatg cgcctcgcgc cggatatcag ccatcgactt
      481 cgtggaaagc tctccgcgcc gcgcctggtc gatccgaggt ttcaaaaaat cggccaaggc
      541 ggcgaccgcc tcgccctcgc tcatgtcatc gagggcaggg gcatcgccaa gggtgcgttt
      601 cagcacatag tccttgatgc tctcgccttt cagggcagcg atagccttca gcttctggtg
      661 ttcttcgggt gtgatatcga ttgagagtct gggcatgatc cgaagataaa gcatcaggga
      721 gcacaaaaca acatttgttg ttgagctata cctatccaag cttttaccca aagttcttct
      781 ttggttctca ctcctgcatg tgatagatga tgtgtcagaa ccagataata gcacaaaaca
      841 tggagttgaa atggcgcgct actccgtaaa caacaacacc cggttcaatg gcgatcacga
      901 agtccaagcc ccgttgcggg gtgaaggtct gtgcgaacga ttcgtgctga gcgcgacgga
      961 atgccttgtc gccggactgc gctttgacgc ggtcaggacc gtctaggacg cggatgcctt
     1021 gcgccggcgg tccatccgcc cggctgcggg gccgcggcgc tttctgcgct ggctgcccag
     1081 ggcggccagg cccagcggca acagcaggac cgaagccggc agcggcaccg cagagacggg
     1141 cggcaaggac ggttccagga cggtgaaatt gccctgccac aggcgccaga tcgccagatc
     1201 gccgcttgtg gtcgtctgcg cgaagggtcc ggcccccagg ggcaggctgt cctcgcggaa
     1261 aaacaccgaa ctgccgggcg tcagattgcc gcccagcacg gcgctgacgc cgtagagcag
     1321 cgagaagctc gaatcatcgg cctggacctg cgtcgccgac ccgcaatcga tcccgccgag
     1381 ctggcaggaa tcgaccgatc cggtttcggt cgttccggga tcgggaacgt tcagcctggc
     1441 cgtgaagctg accctctggc ccggcgtgaa gggcaggatt cgcggcagac cccagacatc
     1501 gtcggcctgg ctcagaaagg tatcgctgcc gtcgaacagg acctggccgc aatcgcccag
     1561 atcatcactc ggcgtgcagc cggacacatc atagacgctg gcatcgaaat aggttgtgcc
     1621 gagaaagccg agatccagcc tgatctcctt cacggtcgcc gcgttcacgg tcgtcgcgaa
     1681 cagaatggcg gtcagaatgg caccgatccg ggtccagaac atggcaaact ctttcctgac
     1741 aagtcacaca gccggcgtcg ccgccgggtc gggaaaagtg taagccaaga gacggttccg
     1801 gccaaacgga ttctgccgga ttcagatgaa ttaaaccttt gcgtgccatt gcctggcgga
     1861 ctctccctca aggtgcgggt gcacgggggt gacgccggtc gcggaacggt ctatgcggtc
     1921 ccggcaggtc aatggtcccg ccagcggatg gtatagaagt tgcatcgact gacatttttg
     1981 tccggagacg gtctgcggca ccgggcgctg cgcgggaccg ccgtgaccct gggcggggtc
     2041 ggggggcagc aattcctgcg gctggcctcg aacctgatcc tgacccggct gatgtttccc
     2101 gaggcattcg gcctcatggc cctgatccag accttcatgg tcgggttgca gatgttttcc
     2161 gatatcggca tcggaccgtc gatcatccag aacagacgcg gcgaggatcc cgatttcctg
     2221 aacacggcct ggacgatcca gatcatccgc ggcacgatcc tgtggcttct gtcctgcgcg
     2281 ctggcctggc cgctggcgcg attctatgac gagccgcaga ttttctggct gatgccggtg
     2341 gtcggtctca gcgccctgat cacggggttc agatcaacca agaacgccgt cgccaaccgc
     2401 aacatgcagc ttggcctgca gaccgcgatc gccctggcgt cgcaggccgc aggcctggtc
     2461 gtgatgatcg tgctggcctg gatgacgtct tcggtctggt cgctggtcat tggcgggctg
     2521 gtcagcggat ttctgagtgt ctgggccggc catcgcttcc tgccggggat gtccaacacc
     2581 ttccgctggg aacggggtgc tgtgcgcgac ctgatcgggt tcggcaagtt catcttcatc
     2641 agcacgctgg cggggttctt cgtcaatcag ggcgagaagg tcgttctggg caagctcgtc
     2701 agcctggccg atctggggat ctacaatatc ggcttcttca tggcgtcctt tccgaccatg
     2761 ctgggcagca tgatcgcggg acggatcctg tttccgctgt atcgcgagat ccggccctcc
     2821 gaaagcctgc ccaatcgcag gaagatccgg cgcgcgcgga acctgctgac cggcagcatg
     2881 atcgcgctgt tcggaaccct cgccatatcg gggaatttcc tgatcgggtt tctctacgat
     2941 ccccgctatg ccgccgccgg gccgatgctg atcatcatgg cgatcatgca gatccccgcc
     3001 gccctgacga tgggcaatgc gcagcttctt ctggccgaag gcgattcgcg gcggttttcc
     3061 cacctgaccc tgatccaggc cgggctgaat ttcatcctgc tcttcggtgg tttctggctg
     3121 atcggaatgg ccggcgtgct gctgatccgg gggctcagca ttatcggcat ctatcccctg
     3181 cagcagatct atctcagccg ctatcacggc accgacctgc gccgggacgc cgtcttcctc
     3241 ctgatcgggg cgctgttctc ggccatcgcc atctgggtca actgggacgt cctggcggaa
     3301 ttcggccgcg tgtcggtatc gcttgcaccg gcggtgacgg ggaactggta tccgaagaac
     3361 ctgttcggcg gctgatcact tgtattcgat cagccgggcc ttgcgccgaa acaggcgcgc
     3421 gaagagatac tggaacgcgc caagcgcctc ggggatcttg gcgatggtca aaagcgcggc
     3481 gcgcggcccg tcgccgtcgc gccgccacag gcgcaggatc tgcgcgggcc acagcagcag
     3541 cagcgccaga aagaccggat ggatcgcaac ggcccccaga aacgccgccg ccggcaggac
     3601 cgcgccccac aggatcgccc ggcgcaaggg cgcggcgtag tggcgttcgg gcgcggcgcc
     3661 atgcatggca tagccctggg cgaaggcaaa gcccgcccgg cgggcgcgtt tccagaactg
     3721 gccgaaccgg gtcatggcgg cgtcatgcag caccatctcg ccgtcgatgc gccggatcgt
     3781 ccagccgcgc gcgcgcagcc ggacgcataa ttcgggctct tccccggcga tcagggcggg
     3841 atcgaaaccg ccgacctggt ccagcgcggc catgcggaac atcgcattgc cgcccaaagc
     3901 gcgcgcctcg cccaccggcg tgtcccattc ccggtcgcag aaacggttgt agaccgaggc
     3961 cccgggaaac cgctcgcggc agcgcccgcc ggttccggca acccccggat tggcctgcag
     4021 aaaggcgcgg gcccggccga tccagcccgg atccagttcg caatcgccgt cgatgaactg
     4081 gaccagatcc gcccggaccc cgccttgccg ccgcagccgg tccagcccgg cattgcgggc
     4141 ccgtgcggcc gtgaagggaa ccgacagatc cagccgcaga acctcgacgc cccggctttc
     4201 ggcctcggcg atactgccat cggtcgaccc ggaatcgaca tagacgatcc ggcgcagatc
     4261 cgccctcttc atgctgtcga gacagcgaat cagacgcacg ccctcgttgc gcccgatcac
     4321 gacggcatcg accaggaagg atgcgttctc cgcggctcgg tcgcatcccg cgccctccag
     4381 ccgccgcccc cggtccccgc gcggcatcat tgcggccccg gcggcgggac cgcggcctgg
     4441 cgccgggccc gaaggcccgt ctggcggcta tacctgtttc gccggagcgg gatcgcctct
     4501 gcggcgtcac cgggcgcggt ctcgcggatc cggcccagtt ccagccggcc ggccagggcg
     4561 ccggccagaa gccatgtcac cggcgtcagc gtggcattcg ggatcaggtc gatcaggttc
     4621 gccgtcagga ccagcgccag gccggcagtg gccgatgtca gggccaggcc gcgccatcgc
     4681 agcgccagga ggaccagcgg aatggccagc aaccccattt cggccagata gcctgtccag
     4741 ccccgcaccc ccatggcctg aacccagtag ccatcggtca cgctgatatc gacgccgtta
     4801 tcgttgtaga cccggttccg gccccagccg ccccagccga aaagcggccg ttcattggcc
     4861 ttggccagca ggatatcctc gttctccagc cggaacgaca gggacgcggc ccgggccgga
     4921 tccagatccc gggcggtcga gacgacggta tcgaccggga tccacccggc gccgcgcagc
     4981 atgggataga ccagaacgat taccgagatc gacgcggcca tcaggatatg caggcgcacg
     5041 ggcatcagca ggatcgtcgc gcccagaaga atgccgatcc ccagggcgcc catgcccttg
     5101 gcgaggatca gggtcatcag cagccacagc gatgccagca gccagcgcat cctgagcggc
     5161 ccggaactca gccgccacag ggtcagcgcc gccaggaaac tgacggacaa aaagatcgcc
     5221 agccacaatc cgtgattcag gaacaccacc ggccgatagc cgcccgcgcg gatatgctga
     5281 agccaggcat ggggaaaata tccgtagatc atcctgctca gctgcggcga catccggatc
     5341 tcgtaaagcg ccggaagcgt gtagatcagt ccgaacaccg ccagcgagac gagaagggct
     5401 atatgggcct gcggatgggc gagatatttc cgggccagca ggaagggtat cagggaaaac
     5461 agcatgttcc ccatgaacga gagcatgtcg tagaagcgca gccccggcag ccagcgcgga
     5521 ccgtaactga ccggatcgcc attgctcacg accgtcccgg ccatgccgat cagaagaacg
     5581 gccagcagga tgcggacggc ccggctgccc gggacgatcc ccggcatgac cattccctcg
     5641 ggcagatcgc ggatcgccgg ccctttcagg aagatcgcgc tggccagcac cgcggcaagc
     5701 ccggcgatcg aattcttgtc cagcgacggc acggcgggca gatcgatcgc ataattctcg
     5761 ggcaggaaaa gatagccccc caggatcgag gcggccaggg cctgggccgg tttccgcgtg
     5821 gcaaacagcc agaacacgac caccggccag aacagcaccg ccaacatgct gaccatggtc
     5881 gctccttcct atcgcccctg cgaaagcgcc cgggcgccgg ccgcctcctc tgcttggaag
     5941 gcgatgtcgg gaaagacgtc cttcatggaa tgatcgtaga cgccccggtt ctttccatag
     6001 gaattgtccc tcatgacaag gttccggccc agcacggcgg acaggaccgc gatatgcagc
     6061 cggttcgtct cgaccaggct ggcgcgttcg aggataagtt gcaggatctt cgcggtcgtc
     6121 gcacaggcgg ccggcgacat gtgggcatcg gaaacgccat tcaggtgccc gctcgaaaac
     6181 atcgccgaca gatcgaaatt cgccgccggc agatcgccgc cgggggcctc gcggtcgccg
     6241 cgcatggcat gaagccggga atccctgaac ctcagatgcc agaggatctt ggtcaccatc
     6301 ttcagccagg cgatcctgat cccgggccgc gacagaaagc ccggatcaag acgccgcgac
     6361 accagatcgt cgcgcgatat catgaatgcc atgtcatgcc cgaggccggt ccgggccgtg
     6421 ccgcccagtc cggacagata ggcatggctg tccttgtccc gcgcaaacag ggtgcagcga
     6481 tcatccatcg ccgcaatgac gtcgccgaag gcgcggatgg tatggggcag cagcaccagc
     6541 ctgcggcaga ccgggtggtt ggacttcagg aagtcgatgg ccctgggata gagttcgatc
     6601 agggatccgc cgccgccata gacgacgctg cggtccggat agacgccatc ggagcggccg
     6661 atctgccagg aaatgcccag tttctcgaac aggatatagg tgcccagggc gatcagcccg
     6721 tctccggcat tgcccggatt gggcacgtag atgatgggtt cgggcccgca ttcgcgcagc
     6781 gcctgggcaa cgggtccgta atcatgcccg tgcggtccct tcatggtctc ggccgtgctc
     6841 accctgcctc ccgtcccgca atgcgtgaat gccgcgcttt ctcagggtcg cgccggatca
     6901 gcgcgatcat gtcccgcgcc caggcatccc atgtcagatt gttcctgcaa tattcgtagg
     6961 atccggctgc cagcgcgtcg aaacccggcc tgtccgacag gatccgggca atcttgtcgg
     7021 cataggcggc cgcgtcggat ccgggatcca tgagaaagcc gttctcgccc tcgcggacca
     7081 gcgatgaaat tcccccgatc tcgttgatga cggccggaac gccatgggca ttggcttccg
     7141 cgaccaccat cggcgtgcaa tcggcctgcg tcggcaggac aaagagatgc gcctgcgaca
     7201 gcgatcgcgt cagcagccgg taatcctttg cccgcccctt gtcgagatag cccaggaacc
     7261 tggcattgcc atagcgggac ggatcgtccg gccggccgcc gatgaccgtc agttcagagg
     7321 cgatcccgcg ccggttgaga atctcgttcg cctcggccgc gatgattccg cccttggtct
     7381 gccagttctt tccgatgaag atcagcttca gcggatccgg ggggggcttg gctccgggcg
     7441 ggggcggcag gacgtcgagg ttgagcccga agctgatggc gtggatcttc gccgcatccg
     7501 cgccgccgaa ttccgccagc gcgcgcccgg ccatgtagcc cgaggaatag acgaccagat
     7561 ccgcgcgctc cagggccgtc tgctcgacaa gatcggcctg ccgcgaggtc ggccgggcat
     7621 agaaatcccg gaggaattgc ggcgtggcat cggtcacatg cacgaatttc ggccccgccc
     7681 cgccgcgcct ttcggggatg aaacgcgacg agaccggcac gatcacccag tccagttcct
     7741 tcaccgcccc ggcctcgggg ccgcgcaggg gcgttttgcg ccaccttctc caggccgaca
     7801 gcagctttcc gcgatagccg cgccgatacg ggcccaggac gcgcagcacg atgtcgtcgc
     7861 ggcgccccag ggcatccagc atgtaggacg gcgtgcccga aaaggaccgc cggtcatagg
     7921 gatcatgggc gcagaagaac cctattttca gcctgtcatc catggccacc gccgatgacc
     7981 gggcgatgaa ccggtctgcc ggatccgggt ttcatggccg cttcatcctg cgcgccatgc
     8041 gaaggccgtc cgatgccgtc tcgccgggat gacctcattc ctggaaatcg ctcaggccat
     8101 tgccgtgccg aaagccgttc agcaccaccc ccagcacatt cgtgtattcg ccgacctcgc
     8161 gttcgcaact gtcgaaatcg ccgtagcggg tctggtcggc gcgggcgatc agcagggcgc
     8221 aatcgacatg ctgcaggaag gcccgcgcat cgtcgccgat caggatcgag ggcagatcga
     8281 agatcatgat gtcgggctga tagcgttgct cgatctcggc cagggtctcg ctggagcgtt
     8341 cggccatcag caggcgcgtc gggtcgcttt cggcacttcc cgacagggcg agggccaggt
     8401 tcggaccgac gcggcaggcg tgatccgcga aatcgcgctc gccgcgcagc agcggcgcga
     8461 tcgagggcgg ggtgggcaga cccagcttgt cggccaccat gggcgcgcgc agatccaggt
     8521 cgaacaggat cgaatgcagt tccggctgcc ggccaagcgc cagggccagg ttgaccgcat
     8581 tcgtggtctt gcccgatcgc ggcaagggcg aggtgatcgc cagccgccgc cagccgttct
     8641 ggcgcatctg atacagcacc ttggtgcgca gcacgtcgaa aggcgccgaa tcgaacgagg
     8701 cgttctggga caggatccgc gaccggatca gcgcgccgcg atccagcggg tcctcgggca
     8761 gcgcctccca cagcgcggtc aggccgctgc cggcgcgggc cgcgacggtg ccggtgcgta
     8821 tcccggcatc gaccgcggcg ggctgcggcg cggcggcggc ctctgcacgc ggggttgcgg
     8881 cggcggcggc ggcgccgcgc ttgcg
//
LOCUS       DTVW01000358            1954 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1449660, whole
            genome shotgun sequence.
ACCESSION   DTVW01000358 DTVW01000000
VERSION     DTVW01000358.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1954)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1954)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1954
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1449660"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1559)
                     /locus_tag="EYO87_04780"
     CDS             complement(<1..1559)
                     /locus_tag="EYO87_04780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009573360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIC65308.1"
                     /translation="MTAQDAGGRPETAAPYAIELKGISKAFGPVQANKDIDLRVAKGS
                     IHGIIGENGAGKSTLMSILYGFYKPDRGRILVNGEPIAIADSQTAIRAGIGMVFQHFK
                     LVQNFTVLENIILGVEDGRLLRPSLAKARGVLKQLAHEYELNVDPDETIEELSVGHQQ
                     RVEILKALYRQADILILDEPTGVLTPAEADHLFRILEGLKAEGKTIILITHKLREIMD
                     ITDTVSVMRRGEMVASVSTAETSPEALAELMVGRKVLLNVDKTPARPGAPVLEVRDLH
                     LIDHEGVERLRGISFDIRAGEILGIAGVSGNGQTQLLELLGGYPEKGARVSGAIRMNG
                     EALDLTGAGSDARTRRRRGIGHVPEDRQTEGLIMDFTAWENIAFGYHDKAEYQKGWLM
                     DNDAIRRDAKKYMEDFDCRPRNCDLAARDFSGGNQQKLVVARELERNPELLLIGQPTR
                     GVDIGAIEFIHKRIIELRDAGKAVLLVSVELDEILSLSDRIAVMFDGRIMGERLPDQT
                     TTGELGLLMAGV"
     gene            complement(1568..>1954)
                     /locus_tag="EYO87_04785"
     CDS             complement(1568..>1954)
                     /locus_tag="EYO87_04785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011746873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BMP family ABC transporter substrate-binding
                     protein"
                     /protein_id="HIC65309.1"
                     /translation="QISQGADVIYAAAGGTGIGVLQATADDGKLGIGVDSNQNYLHPG
                     SMLTSMVKRVDNAVYDAFTAGPDLEPGVKVMDLKANGVGVAIDDNNKDLVPAEMQAAV
                     DDATAKIASGEIKVHDYMTDNACPVE"
BASE COUNT          304 a          639 c          614 g          397 t
ORIGIN      
        1 acgccggcca tcagcaggcc aagctcgccc gtcgtggtct gatcgggcag ccgctcgccc
       61 atgatgcggc catcgaacat gactgcgatg cggtcggaca gcgacaggat ctcgtccaat
      121 tcgacgctga ccagcaagac cgccttgccc gcgtcgcgca actcgatgat ccgcttgtga
      181 atgaattcga tggcgccgat atcgacgccg cgcgtgggct ggccgatcag cagcagttcg
      241 ggattgcgct cgagctcgcg ggccaccacc agtttttgct ggttgccgcc ggaaaaatcg
      301 cgtgcggcca ggtcgcaatt gcgcgggcgg cagtcgaaat cttccatgta tttcttggca
      361 tcgcggcgga tggcgtcatt gtccatcagc caccccttct ggtattcggc tttgtcgtga
      421 tagccgaagg cgatgttctc ccaggcggtg aaatccatga tcagaccctc ggtctgccga
      481 tcctcgggca catggccgat gccgcgcctg cgccgcgtcc gcgcgtcgga accggcaccc
      541 gtcaggtcca gcgcctctcc gttcatgcgg atcgcgccgc tgaccctggc gcccttttcg
      601 ggatagccgc ccagcaattc cagaagctgg gtctggccgt tgccggacac gcccgcgatc
      661 cccaggatct cgcctgcgcg gatgtcgaag ctgatgccgc gaagacgctc cacgccctcg
      721 tggtcgatca ggtgcagatc gcgcacttcc agcaccgggg cgccgggccg ggcaggggtc
      781 ttgtccacgt tcagcagcac cttgcggccc accatcagtt cggccagcgc ctcggggctg
      841 gtctcggcgg tgctgaccga ggccaccatc tcgccgcgcc gcatgaccga gacggtgtcg
      901 gtgatgtcca tgatctcgcg cagtttgtgg gtgatcagga tgatcgtctt gccctcggcc
      961 ttcagtccct cgaggatgcg gaacagatgg tccgcctcgg ccggggtcag aacgccggtc
     1021 ggttcgtcca ggatcaggat atcggcctgg cgatacagcg ccttcaggat ctcgacccgt
     1081 tgctgatggc cgaccgacaa ttcctcgatt gtttcgtctg gatcgacgtt cagttcgtat
     1141 tcgtgggcca gttgcttcag cacgccgcgc gccttggcca gcgaagggcg cagcaggcgg
     1201 ccgtcctcga cgccgaggat gatgttttcc agaaccgtga aattctgcac cagtttgaaa
     1261 tgctggaaca ccatgccgat gccggcacgg atggcggtct ggctgtcggc gatggcgatc
     1321 ggttcgccat tgaccagaat ccggccccgg tcgggcttgt agaagccgta aaggatcgac
     1381 atcagcgtcg atttcccggc gccgttctcg ccgatgatgc cgtggatcga gcccttggca
     1441 acgcgcagat cgatatcctt gttcgcctgc accggaccga aggctttcga aatccccttc
     1501 agctcgatgg cgtagggggc agccgtctcc ggccgccccc ctgcgtcttg tgccgtcatg
     1561 gccattgcta ctcgaccggg caggcgttgt cggtcatgta gtcgtggacc ttgatctcgc
     1621 ccgaggcgat cttggccgtt gcgtcgtcca ccgcggcctg catctcggcg gggaccagat
     1681 ccttgttgtt gtcgtcgatg gcgacgccca cgccattggc cttgagatcc atgaccttga
     1741 cgccgggctc cagatcgggt ccggcggtga aggcgtcgta gacggcgttg tccacgcgct
     1801 tgaccatcga ggtcagcatc gaacccggat gcaggtagtt ctggttgctg tccacgccga
     1861 tgcccagctt gccgtcatcc gccgtcgcct gcagcacgcc gatgccggtt ccgccggcgg
     1921 cagcatagat cacgtccgcg ccctggctga tctg
//
LOCUS       DTVW01000359            1814 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1450323, whole
            genome shotgun sequence.
ACCESSION   DTVW01000359 DTVW01000000
VERSION     DTVW01000359.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1814)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1814)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1814
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1450323"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..111
                     /locus_tag="EYO87_04790"
     CDS             <1..111
                     /locus_tag="EYO87_04790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'(2'),5'-bisphosphate nucleotidase CysQ"
                     /protein_id="HIC65310.1"
                     /translation="GEVVRFDDHTPLVYGKPGFENPFFVAFAPGVLLVKD"
     gene            113..913
                     /locus_tag="EYO87_04795"
     CDS             113..913
                     /locus_tag="EYO87_04795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013963997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
                     /protein_id="HIC65311.1"
                     /translation="MSVVIVIPARFASTRYPGKPLVELTGASGRARSLIRRSWDAART
                     VGGIDRVVVATDDDRIRVHAEGFGAEVVMTAPACRNGTERCAEAVATMGISPEIVVNL
                     QGDAPLTPAWFVEELVAGLRAAPRSDVATPVLRCSGRMRAELIADRHAGRVGGTTAVF
                     GHDMQALYFSKEVIPFASDDVGPDAPSPVFHHVGVYAYRPGALAAYPGWDEGRLEKLE
                     GLEQLRFLERGRQILCVEVQARGRQFWELNNPQDVSRLERMMSDMKID"
     gene            1111..>1814
                     /locus_tag="EYO87_04800"
     CDS             1111..>1814
                     /locus_tag="EYO87_04800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013963998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase"
                     /protein_id="HIC65312.1"
                     /translation="MKRKVTKAIFPVAGLGTRFLPATKSIPKEIMTLVDRPLIQYAID
                     EARAAGITEFIFVTSRGKGALEDYFDHAHELESSLKKAGKNHLLDLLRTTNMESGAIA
                     YIRQHKALGLGHAVWCARRLLADDEPFAVILTDDVIMGEPPCLQQMIEAYGETGGSMV
                     ATMEVAPEKAASYGVLDVSEDMGAIVKVRGMVEKPAPETAPSNLAVIGRYILAPTVMQ
                     NLNKLKAGSGGEIQLT"
BASE COUNT          312 a          561 c          613 g          328 t
ORIGIN      
        1 ggcgaggtgg tgcgtttcga cgatcacacg ccgctggtct atggcaaacc cggtttcgaa
       61 aatccgttct tcgtcgcctt cgcgcccggc gtgctgctgg tcaaggactg agatgtcggt
      121 cgtcatcgtc atcccggccc gcttcgcctc gacccgctat ccgggcaagc cgttggtcga
      181 actgaccggc gcttcgggcc gcgcgcgcag cctgatccgg cgcagttggg atgccgcccg
      241 caccgtcggc ggcatcgacc gcgtggttgt cgccaccgat gacgaccgca tacgggtcca
      301 tgcggagggc ttcggcgccg aggtggtgat gaccgccccg gcctgtcgca acggcaccga
      361 acgctgcgcc gaggcggtcg cgacgatggg catctcgccc gagatcgtcg tcaacctgca
      421 gggcgacgcg ccgctgaccc ccgcctggtt tgtcgaggaa ctggtcgcgg gcctgcgcgc
      481 ggccccgcga tccgatgtcg cgacgccggt gctgcgctgt tcggggcgga tgcgggccga
      541 actgatcgcc gatcgccatg ccggtcgcgt cggcggcacc accgccgtct tcgggcacga
      601 catgcaggcg ctgtatttct cgaaagaggt cattcctttc gcgtcggatg atgtcgggcc
      661 cgacgcaccc agtccggtct ttcatcatgt cggcgtctac gcctatcgcc ccggcgcgct
      721 ggcagcctat cccggatggg acgagggtcg gctggaaaag ctggaagggc tggagcagtt
      781 gcgttttctg gaacgcggca gacagatcct gtgcgtcgag gtgcaggcgc gcggccggca
      841 attctgggaa ctcaacaacc cccaggacgt ttcgcggttg gaacggatga tgtccgatat
      901 gaagatcgac taggccgggt ccgccggttc gggcccggga acccggcaag tggcggaaat
      961 gcgtcgaatg cgcaccgatg tcttggcgag cccttgcccg ggttgctagg atggcaggtg
     1021 ttgatgcttg tgattccccg gtgaagttgt caggtgctgc tcaggtcggc gcgatgtccg
     1081 gcacagtctg aaggaaaagg tgcgatggcg atgaagcgta aggtgaccaa ggcgattttc
     1141 ccggtggcgg ggctgggaac gcgcttcttg ccggcaacca agagcatccc caaggaaatc
     1201 atgaccctgg tggaccggcc gttgatccag tacgcgatcg acgaggctcg ggccgcgggc
     1261 attaccgaat tcatcttcgt gacctctcgc gggaagggcg cgctggaaga ttatttcgat
     1321 catgcccacg aactggaatc gagcctgaag aaggcgggca agaatcatct tttggacctt
     1381 ctgcgcacga ccaacatgga atcgggcgcc atcgcctata tccgtcagca caaggcgctt
     1441 ggcctcggcc acgcggtctg gtgcgcacgc cgccttctgg ccgatgatga acccttcgcg
     1501 gtgatcctga ccgacgacgt catcatgggc gaaccgccct gcctgcagca gatgatcgag
     1561 gcctatggcg agaccggcgg cagcatggtc gccacgatgg aggtcgcgcc cgaaaaagcc
     1621 gcgtcctacg gcgtgcttga tgtcagcgag gacatgggcg ccatcgtcaa ggtgcgcggc
     1681 atggtcgaaa agccggcccc ggagaccgcg ccatcgaacc ttgcggtcat cgggcgctat
     1741 atccttgcgc cgacggtgat gcagaacctc aacaagctga aggccggttc cggcggcgag
     1801 atccagctga ccga
//
LOCUS       DTVW01000360            3494 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1451758, whole
            genome shotgun sequence.
ACCESSION   DTVW01000360 DTVW01000000
VERSION     DTVW01000360.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3494)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3494)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3494
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1451758"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1146
                     /locus_tag="EYO87_04805"
     CDS             <1..1146
                     /locus_tag="EYO87_04805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlhA"
                     /protein_id="HIC65313.1"
                     /translation="PGGRETARRQRAAEEALPDAEAKSENPRPAARIGDVLDTDEISV
                     EIGSDLVMTALDQARGLGSRISNLRIHIARTFGLILPDVRITDTDELAPGDYQIRIHG
                     VIRGRGTLRAGEVLALGPDPVLAGLNGASVREPVYSSPARWIARDDQDDAATLGATVV
                     TPMEVLSTHLMEVVKSNLAALMTLSAMQRQIEELKSLSDPTRAERNRRHLDGIMPEKV
                     TPETLLAILRALLEERISIRNLPLIVDAICEFRNLDQIEAIYELVRKRLRGQISQQYS
                     DQGGRIAALQLHPAWEAEFSRADAETGRNGGGAMTPALSQKLLERTRRALATSDPAAR
                     TIIVAPDHRRRMVRAVLGSNGVATPVLGLEEIDPGVDLQVVGTIEAA"
     gene            1143..1901
                     /locus_tag="EYO87_04810"
     CDS             1143..1901
                     /locus_tag="EYO87_04810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion protein"
                     /protein_id="HIC65314.1"
                     /translation="MNWDQLSQWVPGLDWRLVLVYLRVQACVLALPGLGERVIPARVK
                     VGLAMAVSPLLAGAVAPAGVPDNTATAMAQAAGEVVIGAATGLLLRLLALALDVATSA
                     IAATASLSQIIGVQNEAAPHPIGNLMHLGGVAILMALGLPVMVVQLMADSFVLWPPAS
                     WPEIGRLMPEAVAILSRSFVLAMMLAAPFTLGGFMFQALSGVINRVMPALPVVFIGSP
                     AAVLLALAGLALLAPLLVGLWADAVLGFMLPGQG"
     gene            1898..2959
                     /locus_tag="EYO87_04815"
     CDS             1898..2959
                     /locus_tag="EYO87_04815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlhB"
                     /protein_id="HIC65315.1"
                     /translation="MSEDKDDKQYDASEQKLRKAREKGDIPRSTELNVAAMYLGAWLA
                     FGVGAGFAVNQWLSMASRAMGAEGWPLNSSFALATSLAQFAAIGLIGLTMVPALAIMV
                     ALIAQRGLVFAPQKLAPDINRINPIKSAGQKFGPSGLVQFGISLGKSVLVCIGGWFLF
                     ADLLDRIAASAMGGGRWVIDLAELLSRVLMLAIGVSVIFAGFDMAWKWHEHRQKNRMT
                     RKEMEDEHKESEGDPHLKAARRQRAVDIAMKQMLADVARADVVIVNPTHYAVALEWKR
                     GSGRAPVCLAKGVDDVAARIRAKAREKEVPIWSDPPCARAIHATVEIGDEIQREQFAA
                     VAAAIRFAEKMRAKARAGW"
     gene            2953..3324
                     /locus_tag="EYO87_04820"
     CDS             2953..3324
                     /locus_tag="EYO87_04820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65316.1"
                     /translation="MVTQNDRLAALERIARIKAERELKKFAAFSQRMAHARQRADALR
                     AALDQCYRSTAPLGVAEARMANAQAGRSARELTRADRELADLEPRFEAARQVAAREFG
                     RAEVLLSLSRSLAAKSRGPRF"
BASE COUNT          577 a         1097 c         1201 g          619 t
ORIGIN      
        1 cccggcggcc gagagacggc ccgccgccag cgcgccgccg aagaagccct gccggatgct
       61 gaggcgaaat ctgaaaaccc gcggccggcc gcacggatcg gcgatgttct ggacaccgac
      121 gagatcagtg tcgagatcgg atccgacctg gtgatgaccg cgctggatca ggcgcggggc
      181 ctgggcagcc gcatttccaa cctgcgcatc catatcgccc gcaccttcgg actgatcctg
      241 cccgacgtgc gcattaccga taccgacgaa ctggcgccgg gtgactatca gatccgcatt
      301 cacggggtca tccgcggtcg tggcacgctg cgcgcgggcg aggttctggc gcttggcccc
      361 gatccggttc tggccggtct gaacggagcc tcggtgcgag agccggtcta ttccagtccg
      421 gcccgctgga tcgcccgcga cgatcaggac gacgcagcaa ccttgggtgc cacggtcgtg
      481 acgccgatgg aggttctgtc cacccacttg atggaggtgg tcaagtcaaa cctggccgcc
      541 ttgatgacgt tgagcgcgat gcagaggcag atcgaagaac tgaaatcgct ttccgatccg
      601 acgcgtgccg aacgcaaccg ccgacacctg gatggaatca tgcccgagaa ggtcacgccc
      661 gagacgctgc tggcgatcct cagggcgttg ctggaggaac gcatctcgat ccgcaacctg
      721 ccgctgatcg tcgatgcgat ctgcgaattc cgcaatctcg atcagatcga agccatctac
      781 gaactggtcc gcaagcggct gcgcggccag atcagccagc aatattccga tcaaggcggc
      841 cggatcgcgg cgctgcaact gcaccccgcc tgggaggccg aattctctcg cgcggatgcc
      901 gagaccggcc ggaacggcgg cggcgcgatg acgcccgctt tgtcacagaa gcttctggag
      961 cggacccggc gcgcgcttgc gacgtcggat cccgcagcgc gcacgatcat cgtggcccct
     1021 gaccaccggc gtcggatggt gcgcgcggta ttgggatcga atggggtcgc gacgcccgtc
     1081 ctgggcctgg aagagatcga tccgggcgtc gatctgcagg tggtcggcac catcgaggcc
     1141 gcatgaactg ggatcagctt tcgcaatggg ttcccggcct cgactggcgg ctcgtactgg
     1201 tctatctgcg cgtgcaggcc tgcgttcttg ccctgccggg gctgggcgaa cgggtcattc
     1261 cggcccgcgt caaggtcggc ctcgccatgg cggtgtcgcc gctgctggcc ggggctgtcg
     1321 cacctgccgg tgtgcccgac aatactgcga ccgcgatggc ccaggcagcc ggagaggttg
     1381 tcatcggtgc cgcgacgggg ttgctgttgc ggttgctggc gctggcgctg gatgttgcga
     1441 cctcggcgat cgcggcgacc gcatccttgt cgcagatcat cggcgttcag aatgaggccg
     1501 cgcctcatcc gatcggcaat ctgatgcatc tgggcggcgt ggccatcctg atggcgctcg
     1561 gtctgccggt catggtcgtg cagttgatgg ccgactcgtt cgtgctgtgg cctccggctt
     1621 cgtggcccga gatcggccgg ctgatgccgg aagccgtcgc gatcctgtca cgcagtttcg
     1681 tgctggcaat gatgctggcc gcgcccttca cactgggcgg attcatgttt caggcattgt
     1741 caggcgtgat caacagggtc atgccagcgt tgcccgtggt cttcatcggc tctccggccg
     1801 cggtccttct ggcgctggcg gggctggccc tgctggcgcc gctgcttgtc ggtctttggg
     1861 ccgatgccgt tctgggtttc atgcttccgg ggcagggatg agcgaggaca aggacgacaa
     1921 gcaatacgat gcgtccgagc agaagctgcg caaggcgcgc gaaaagggcg acattccgcg
     1981 ctcgaccgaa ctgaacgtgg cggcgatgta tctgggcgcc tggctggcct ttggcgtggg
     2041 cgcgggattc gcggtcaatc agtggctttc gatggccagc cgcgcgatgg gggccgaggg
     2101 ctggccgctg aattccagct ttgcccttgc gacaagcctg gctcagtttg ccgcgattgg
     2161 cctgatcggc ctgacgatgg tgccggcgct ggcgatcatg gtggcattga tcgcgcagcg
     2221 cggcctggtc tttgcgccgc agaaactggc gcccgacatc aatcgcatca acccgatcaa
     2281 gtcggcgggt cagaaattcg gaccctcagg actggtgcag ttcggcattt cgctgggcaa
     2341 atccgttctg gtctgcattg gcggctggtt cctttttgcg gatctgctgg accggatcgc
     2401 cgccagcgcg atgggcggcg gacgctgggt catcgatctg gccgaactgc tgagccgcgt
     2461 gctgatgctg gcgatcggcg tctcggtcat cttcgccggg ttcgacatgg cctggaaatg
     2521 gcacgaacac cgccagaaga accgcatgac ccgcaaggaa atggaggatg agcacaagga
     2581 atccgaaggc gacccgcatc tgaaggcggc ccgccgccag cgcgccgtcg acatcgcgat
     2641 gaagcagatg ctggccgatg tcgccagggc cgacgttgtg atcgtgaacc cgacccatta
     2701 tgcggtcgcg ctggaatgga aacgcggcag cggccgggca ccggtctgtc tggcgaaggg
     2761 cgtggacgat gtggcggccc ggatccgcgc caaggccagg gaaaaggagg ttccgatctg
     2821 gtccgacccg ccctgcgcgc gcgcgatcca tgccaccgtc gagatcggcg atgaaatcca
     2881 gcgcgagcaa ttcgccgctg tcgccgccgc gatccgtttt gccgaaaaga tgcgggcaaa
     2941 ggcgcgtgcg ggatggtaac gcaaaacgac aggctggccg cactggaacg catcgcgcgg
     3001 atcaaggctg aacgcgagct gaagaagttc gcggcctttt ctcagcgtat ggcccatgcc
     3061 cggcaacgcg ccgatgccct ccgcgcggcg ctggatcaat gctatcgcag caccgcgcca
     3121 ctcggcgtgg cagaggcccg gatggccaat gcgcaggcag ggcgcagtgc ccgcgaactg
     3181 acccgcgccg atcgggaatt ggctgacctg gagccgcgat tcgaggctgc caggcaggtc
     3241 gctgcgcggg aattcggccg tgccgaggtg ttgctgagcc tgtcgcggtc acttgcggcg
     3301 aaatcccggg gcccgcgctt ctgaacggcg gccatccttg cgcgcccggc gcgtggctta
     3361 tcttgtggat gccgcggcag gcagttccag atcgacccag accagacgat gatccgatgc
     3421 ggccacgatg gacctggcca gcggatcatc gggcgccggc cacaagacgc cactggcgac
     3481 gatcttcagc gatc
//
LOCUS       DTVW01000361            4771 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1452798, whole
            genome shotgun sequence.
ACCESSION   DTVW01000361 DTVW01000000
VERSION     DTVW01000361.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 4771)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4771)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4771
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1452798"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1018)
                     /locus_tag="EYO87_04825"
     CDS             complement(<1..1018)
                     /locus_tag="EYO87_04825"
                     /EC_number="2.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018633659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acyltransferase"
                     /protein_id="HIC65317.1"
                     /translation="MTVPVYICDYIRTPIGRYGGALATVRADDLAAIPIRALMARNTG
                     ADWAALDQVVMGAANQSGEDNRNLARMAVLLAGLPETVPGVTVNRLCASGMDAVISGA
                     RQIAVGEADLMIAGGSESMSRAPFVMPKASGPYDRRAEIHDTTIGWRFVNDAIASAYG
                     VDSMPETAENVAAEFGVSREDQDRLALSSQNRAAQALATGMLAREICPVDISRRKAGP
                     VTVETDEHPRETTLEQLARLPAPFREGGSVTAGNASGVNDGAAALLLASEAGIARHGL
                     TPLARYDGAASAGVPPRIMGIGPVPSTERLCSQLGLSVADFDRIELNEAFAAQAIAVC
                     RKLGL"
     gene            complement(1015..1410)
                     /locus_tag="EYO87_04830"
     CDS             complement(1015..1410)
                     /locus_tag="EYO87_04830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008192058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HIC65318.1"
                     /translation="MKNAVIHPEAWKPAKGYANGILTPSGVLHIGGQIGWDAEQNFVA
                     DDFVGQMRQALSNIVTIVETAGGSASDVVRLTWFVTDKREYLARQAEVGAAYREVFGK
                     HFPAMSMLVVAGLVEDAALVEIEGTAELR"
     gene            complement(1407..1808)
                     /locus_tag="EYO87_04835"
     CDS             complement(1407..1808)
                     /locus_tag="EYO87_04835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009177256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HIC65319.1"
                     /translation="MFERREKILFRHCDPAGIVFFPRYFEMVNDHVEAFFAEILHWPF
                     EVMLADGGLPTRAISTGFTAPSRHGDVLTLRLELRRLGDTSLEYRMTASAGDELRFET
                     EATLVHIDRQGRPSPWPETIRDRIQTWKDTT"
     gene            complement(1973..3592)
                     /locus_tag="EYO87_04840"
     CDS             complement(1973..3592)
                     /locus_tag="EYO87_04840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008192851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-aminobenzoate-CoA ligase"
                     /protein_id="HIC65320.1"
                     /translation="MLSPSAHTDTFARDNLPAEESWPKLLLDGFDYPERLNAAVELTD
                     RMVDKGFGDRTALIGNGRRRTYKELTDWTNRLAHALVDDIGVRPGNRVLIRSANNPAM
                     VACWLAATKVGAVVVNTMPMLRASEFSKYADKAEIEFALCDTRLMDEMTKCAKENRFL
                     KKVVGFDGTSNHDAELDRLALEKPVAYAACETAQDDVALLGFTSGSTGDPKATMHFHR
                     DLLIIADGYAKEVLGVTPDDIFVGSPPLAFTFGLGGLAIFPLRFGAAATLLETASPPN
                     MVEIIETYRATVCFTAPTAYRAMLQAMDEGADLSSLRAAVSAGETLPAPVYDAWMEKT
                     GKPMLDGIGATEMLHIFISNRFDDHRPTCTGRPVTGYEARVLNEDGSEAKRGDMGRLA
                     VRGPTGCRYLHGERQAEYVQDGWNITGDSFMCDDDGYFHFVARNDDVIVSSGYNIAGP
                     EVEAALLAHEDVSECAVIGTPDPERGAIVQAHVVLRDGVLPGDAMTKRLQDHVKAMIA
                     PYKYPRSIVFRAELPKTQSGKIQRFRLNKPE"
     gene            complement(3689..4387)
                     /locus_tag="EYO87_04845"
                     /pseudo
     CDS             complement(3689..4387)
                     /locus_tag="EYO87_04845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009805919.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
     gene            complement(4377..4631)
                     /locus_tag="EYO87_04850"
                     /pseudo
     CDS             complement(4377..4631)
                     /locus_tag="EYO87_04850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017721815.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
BASE COUNT          819 a         1512 c         1526 g          914 t
ORIGIN      
        1 cgaggccaag cttgcggcag acggcgatcg cctgcgcggc aaaggcctcg ttcagttcga
       61 tgcgatcgaa atcggcgacg ctcagcccga gctggctgca aagccgctct gtcgacggga
      121 ccgggccgat gcccatgatc cggggcggca caccggccga ggccgcgccg tcataccgcg
      181 cgagcggggt caggccgtgg cgtgcgatgc cggcttcgga agcaagaagc agggccgcgg
      241 cgccgtcatt gacgcccgaa gcgttgccgg ccgtgacgct gccgccctcg cggaacgggg
      301 caggcagacg cgccagctgc tcaagggtgg tctcgcgggg gtgttcgtct gtctcgaccg
      361 tcaccgggcc ggcctttcgg cgcgatatat cgaccgggca gatttcacgg gccagcatgc
      421 cggttgcgag ggcctgcgcc gctcggttct ggctggacag ggccagacga tcctggtctt
      481 cgcgcgagac gccgaattcg gcagccacgt tctccgctgt ctctggcatc gagtcgacgc
      541 cgtatgcgct ggcaatcgcg tcgttgacaa aacgccatcc gattgtggtg tcgtggatct
      601 cggctcggcg gtcgtatggg ccgctggcct ttggcatgac gaagggggcc cgactcatac
      661 tttccgaacc gcccgcgatc atcagatcgg cctcgccgac ggcgatctgg cgcgcgcccg
      721 aaatcactgc atccataccc gaggcgcaga gacggttgac ggttacgccc ggcacagtct
      781 cgggcagacc ggccagcagc accgccatcc gggcgaggtt gcgattgtct tcacccgact
      841 ggtttgccgc gcccatgacc acctggtcga gagctgccca gtcggccccc gtattgcgcg
      901 ccatcaatgc ccggatcgga atcgcggcga ggtcgtcggc gcgcaccgtg gccagagcgc
      961 cgccatagcg gccgatcggc gtgcggatgt agtcgcagat gtagacagga accgtcatct
     1021 cagctcagcc gtcccctcga tctcgacaag ggctgcgtcc tctacaagtc ccgcgacgac
     1081 gagcatcgac atggccggga aatgcttgcc gaacacctcg cgataggctg cgccgacttc
     1141 ggcctggcgc gcaagatact cgcgcttgtc tgtgacgaac caggtcaggc gcaccacatc
     1201 tgatgcagag cctccggcgg tctcgacgat ggtgacgatg ttgctcagcg cctgccgcat
     1261 ctgtccgacg aaatcgtccg caacgaaatt ctgctcggcg tcccagccga tctggccgcc
     1321 gatgtgcagc acaccacttg gcgtcaatat accgttggcg taccccttgg ctggtttcca
     1381 ggcttcgggg tgaatgaccg catttttcat gtcgtgtctt tccacgtctg aattctgtct
     1441 ctgatcgtct cgggccatgg gctgggccgg ccttggcggt cgatgtgaac aagcgtcgcc
     1501 tcggtctcga agcgcaactc atcgcccgca gaggctgtca tccggtattc gagcgaggtg
     1561 tctccgagcc gccgcagctc cagtcgcaac gtcaggacat cgccatgccg gcttggggcc
     1621 gtgaaaccgg tggatatcgc ccgcgtcggc aacccgccat cggcaagcat gacttcgaac
     1681 ggccagtgaa ggatctcggc gaaaaacgcc tcgacatgat cgttcaccat ctcgaaataa
     1741 cgcgggaaaa agacgatccc cgcgggatcg cagtgccgga acaggatttt ttcacgtctc
     1801 tcaaacatct gacccacccc agactttcaa gcccgatccc ttcacgcttt cagcgcccag
     1861 gcacagttgt gtactttcat gtgttctact tccttgttct tgcagccatc gggccttcgt
     1921 ccttcgtctc tcgggcgacc tctgcgccaa ccgacgcctc ttcaccaggg aatcactcag
     1981 gtttgttcag ccggaatcgc tggatttttc ccgactgtgt ctttggaagc tctgcgcgga
     2041 agacgatgct gcgcgggtat ttgtaggggg cgatcattgc cttcacgtgg tcttgaagac
     2101 gctttgtcat cgcatcgccg ggcaaaacgc cgtcgcgaag gacgacatgc gcctggacga
     2161 tcgcgccgcg ctccgggtcg ggcgtgccga tcacggcgca ttcgctgacg tcctcgtgtg
     2221 ccagcagcgc tgcttcgact tcgggacccg cgatgttgta tccggacgag acgatgacgt
     2281 cgtcattgcg cgcgacgaag tgaaagtagc cgtcgtcgtc gcacatgaaa ctgtcgccgg
     2341 tgatgttcca gccatcctgc acatactcgg cctgacgctc gccatgcagg tatcggcagc
     2401 ccgtcggccc gcggaccgca aggcgaccca tgtcgccgcg cttcgcctcc gatccatcct
     2461 cgttcaggac tctggcttcg tatcccgtga cgggccgacc ggtgcaggtg gggcgatggt
     2521 cgtcgaagcg gttcgagatg aagatgtgca gcatctcggt cgcgccgatc ccgtcgagca
     2581 tcggtttgcc ggtcttttcc atccaggcgt cgtagaccgg agcgggcagc gtttcgccgg
     2641 cagagaccgc ggcgcgcagc gacgacaggt ccgcgccttc gtccatcgcc tgaagcatcg
     2701 cacggtaggc agtgggcgcg gtgaagcaga ccgttgccct gtaagtctcg atgatttcga
     2761 ccatgttcgg cggcgacgcc gtttccagaa gcgtggccgc cgcgccgaaa cgcagcggaa
     2821 atattgccag gccgccaagc ccgaaggtga aggccaaggg cggtgagccg acgaagatgt
     2881 cgtcgggcgt gaccccgaga acttccttgg catagccgtc ggcgattatc agaagatcgc
     2941 gatggaagtg catcgtggcc ttcggatctc cggtcgagcc cgaggtgaaa ccaagcagcg
     3001 ccacatcgtc ttgcgccgtt tcgcaggccg cgtaagcgac gggcttttcc agcgcaagcc
     3061 ggtcgagttc ggcatcgtgg ttagaggtgc cgtcgaagcc gacgaccttt ttcaggaacc
     3121 ggttttcctt cgcgcatttc gtcatttcgt ccatgagacg tgtgtcgcag agcgcgaatt
     3181 cgatctcggc cttgtcggcg tatttcgaaa attcgctcgc gcgcagcatc ggcatcgtgt
     3241 ttacgacgac cgcacccact ttggtggcgg ccagccaaca ggccaccatc gcaggattgt
     3301 tggccgagcg gatcagcacg cggttgccag gcctgacccc gatatcgtcc accagcgcat
     3361 gagcgaggcg gttggtccag tcggtcagtt ccttgtaggt ccgccgccga ccgttgccga
     3421 tcagggcggt gcggtcgccg aaacccttgt cgaccatgcg atcggtcagc tcgaccgcgg
     3481 cattcaggcg ctcgggatag tcgaacccgt cgagaaggag cttcggccag ctctcttccg
     3541 ctggcaggtt gtcacgggca aaggtgtcgg tatgggcaga aggggaaagc atggatcaca
     3601 actccgttct gacggtccaa agtttgcggc accaaaggtc cggtttccgc cgcgggttgc
     3661 tggtgttgcc gaacttgtat ggatccggtc atggcgtccc ggcctgatgc gacgccatgg
     3721 tctggcgcgc gatgatgacc ttctgcacgt cggacgcgcc ctcgtaaatg cgcagcgccc
     3781 ggatctcgcg gtagagccgc tcgacgatcg cgcccgagcg tacgccgtcg ccgccgtgca
     3841 gctggaccgc cttgtcgatg atccgttgcg cctgatcggt tgcgtaaagc ttggccatcg
     3901 cggcttcgcg ggtgatgcgc ggctggccgc tgtcgcgcgc ccaggcggcg cggtaaacga
     3961 gcagggcggc ggcgtcgatg tcgagcgcca tatccgcgat atggccctgg accatctgaa
     4021 gctcgaacag gggtgcaccg ccgatcttgc gctgcgctac gcgatcaagc gcctcgtcca
     4081 gcgcgcggcg ggcgaacccc aaggccgccg ccgcgacggt ggggcgaaag atgtcgagca
     4141 ctgacatggc gatgcgaaag ccctgaccgg gttcccccag cagggccgag gccggaatcc
     4201 gggcgtccga gaaccgcaga gtggcaagcg gatgtggcgc gatggtgtcg agccgcgcgg
     4261 ctatctccag tcccggtgtg tcggctggca ggacaaaggc cgacaggccc ttggcgcccg
     4321 gtgcttcgcc ggttcgggcg aagagcgtgt agacgtccgc gatgccgcca ttcgagatcc
     4381 aggtctttga tcgagatcgg cactccgtgc agggggccaa ggctgtcccc ccgtaccacg
     4441 gcctcctctg caaacttggc ggtcaacatc gcctcgtctc cagtaacggt caggtatgag
     4501 ttcagctccg agtccagtcg gtcgatcctg ctgagataaa gctcagtgag ctctacgggg
     4561 gatacctgtt tgctggcaat gagacgccgc aattccaggg ctggagtgaa ggcgaggtcg
     4621 ttgtcaccca tggcatcctc ttctccgctg atcgagttgc tcgggcgagt gtagcaccgc
     4681 ctttcgaggc ggtcaacgga acgagcgagc gcctgtggac aggatttctc cctggttgga
     4741 ttcacaaaac cttgtcacta ccccgcgctg a
//
LOCUS       DTVW01000362            1254 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1454657, whole
            genome shotgun sequence.
ACCESSION   DTVW01000362 DTVW01000000
VERSION     DTVW01000362.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1254)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1254)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1254
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1454657"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..968
                     /locus_tag="EYO87_04855"
     CDS             <1..968
                     /locus_tag="EYO87_04855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_351797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HIC65321.1"
                     /translation="PALILAATAMIGAIAVAERQPTRLLIFSALYPFLGVWLLWGGSL
                     WGPLMVLASFGLGALAWVVVARLLPLLAAAAAIIVVLVWWIGFAGRAAEDLQNLLPLA
                     ITPVASDQFGGFLLAITIGIAGIALSLPMGIMLALARRSDMFLVKSLSVMFIEFIRGV
                     PLISLLFVASLLLNYFLPPGTNFDIILRVIIMVTLFAAAYMAEVIRGGLAALPKGQYE
                     AADALGLDYWKAQRLIILPQALKISIPGIVSTFIGMFKDTTLVTFVGLFDPLKGISDF
                     VRANFAWKGIYWEPFIFVGAIFFIICFSMSRYSMFLERRLARDHR"
     gene            978..>1254
                     /locus_tag="EYO87_04860"
     CDS             978..>1254
                     /locus_tag="EYO87_04860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_351798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HIC65322.1"
                     /translation="MSEAIDRDINRSHMKVSDEIAIDIRNMNKWFGTFHVLRDIDLTV
                     HKGERIVIAGPSGSGKSTLIRCINRLEEHQAGHITVDGVELTSDIKNI"
BASE COUNT          200 a          394 c          386 g          274 t
ORIGIN      
        1 caccggcgct gatcctggcc gccaccgcga tgatcggcgc catcgccgtg gccgaacggc
       61 agccgacccg gctgctgatc ttctcggcgc tctatccgtt tctgggcgtc tggcttctgt
      121 ggggcggcag cctttggggg ccgctgatgg tgctggccag tttcggcctc ggggcgctgg
      181 catgggtcgt ggtcgcccgg cttttgccgc tgcttgcggc agcggcggcg atcatcgtcg
      241 tgctggtctg gtggatcggc ttcgccggac gggccgccga ggatctgcag aacctgcttc
      301 cgctggcgat cacgccggtc gcctcggacc agttcggcgg tttccttctg gccatcacca
      361 tcgggatcgc cggaatcgcg ctgtcgctgc ccatgggaat catgctggcg cttgcgcgcc
      421 ggtcggacat gttcctggtg aaatcccttt cggtgatgtt catcgaattc attcggggcg
      481 tgccgctgat ctcgcttctg ttcgtggcct ccttgctgct gaactatttc ctgccgccgg
      541 gcacgaattt cgacatcatc ctgcgggtca tcatcatggt aacgctgttt gccgcggcct
      601 acatggccga ggtgatcagg ggcggtctgg ccgccttgcc gaaggggcaa tacgaggcgg
      661 ccgatgccct gggtctggat tactggaagg cgcaacggct gatcatcctg ccgcaggcgc
      721 tgaagatctc gatcccgggg atcgtctcga ccttcatcgg catgttcaag gacacgacgc
      781 tggtgacctt cgtgggcctg ttcgatccgc tgaagggcat ttccgacttc gtccgtgcca
      841 atttcgcctg gaagggcatc tactgggagc cgttcatctt cgtcggcgcc atcttcttca
      901 tcatctgctt cagcatgtcg cgctattcga tgttccttga acgccggctt gcccgcgacc
      961 accgatagga tcccgccatg agcgaagcca ttgaccgcga catcaaccgc agccacatga
     1021 aggtcagcga cgagatcgcc atcgacatcc gcaacatgaa caagtggttc ggaaccttcc
     1081 acgtgctgcg cgacatcgac ctgacggtgc acaagggcga acggatcgtc atcgccggcc
     1141 cctccggatc aggcaaatcg acgctgatcc gctgcatcaa tcgcctggaa gaacatcagg
     1201 cgggccatat caccgtggat ggcgtcgagt tgaccagcga catcaagaat atcg
//
LOCUS       DTVW01000363            1950 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1455166, whole
            genome shotgun sequence.
ACCESSION   DTVW01000363 DTVW01000000
VERSION     DTVW01000363.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1950)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1950)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1950
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1455166"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(86..364)
                     /locus_tag="EYO87_04865"
                     /pseudo
     CDS             complement(86..364)
                     /locus_tag="EYO87_04865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011746844.1"
                     /note="catalyzes the formation of
                     2-N(omega)-(L-arginino)succinate from L-citrulline and
                     L-aspartate in arginine biosynthesis, AMP-forming;
                     incomplete; partial in the middle of a contig; missing
                     C-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
     gene            479..1726
                     /gene="ilvA"
                     /locus_tag="EYO87_04870"
     CDS             479..1726
                     /gene="ilvA"
                     /locus_tag="EYO87_04870"
                     /EC_number="4.3.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011746842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine ammonia-lyase IlvA"
                     /protein_id="HIC65323.1"
                     /translation="MENFVASVRAAETALRDLFEPTPLQRNDHLSAKFGADIWLKRED
                     LTPVRSYKLRGAFNAMRKLVSDKPGSSAHFVCASAGNHAQGVAFACRHFGARGTIFMP
                     VTTPQQKIQKTRIFGGDAIEIVLNGDYFDQTLAAAQAFSSRNGAAFLSPFDAPDVIEG
                     QATVGLEMLEQLGRAPDLVVLPVGGGGLSSGVTRYFGTEAPETCFAFAEPSGGASLQA
                     ALQTGAPVALPAVDSFVDGAAVARIGALPFEILRRFSPADVHLAPEDRICRTMLEMLN
                     TEGVVLEPAGALAVDVLQDLDDIAGKTIVCVCSGGNFDFERLPEVKERAQRYSGVKKY
                     FVLRMPQRPGALRDFLEMLGPDDDIARFEYLKKSARNFGSVLIGIETNEPANLTALKA
                     RLDRTGFVYRDITNDEILAELLV"
BASE COUNT          345 a          634 c          623 g          348 t
ORIGIN      
        1 cggccgggcc gctggcccag taggcgcgga ccagcatggc ggtgccgtga ctgtattggc
       61 gatccaccag cagctcttcg ttgctcagca gatacagccc ctcatagacc gcattggcgc
      121 ggaacatcgg aaagacgaaa tcgcgcacga attcctcgcg caggtcctcg atatggatgt
      181 tttccggcgc gatgcccagc atctcggcct ttcggcgcgc gggctccagt tcctcgccct
      241 ggcccagatc ggcggtgaag gtgatgacct cgcagccata ttcggtctgc aaccatttca
      301 ggatgatcga ggtatcgagg cccccggaat aggcgaggac gactttcttc ggcgcgtcgg
      361 acatggcgga cccctttcga attgccgagg cgggaatacg gtcaatcggc gctgctcaca
      421 agggccgcag gggtcattgc ccttgccaag tccgcgcttt cgcggcatgg gcggctgcat
      481 ggaaaacttt gtcgcctccg tcagggctgc cgagaccgcg cttcgcgacc tgttcgagcc
      541 cacgcccctg caacgcaacg accatctgtc ggccaagttc ggcgccgaca tctggctgaa
      601 gcgcgaggat ctgacaccgg tgcgcagcta caagctgcgg ggcgccttca atgccatgcg
      661 caagctggtc agcgacaagc cgggcagcag cgcccatttc gtctgcgcca gcgccggcaa
      721 tcacgcccag ggggtggcct ttgcctgccg tcatttcggc gccagaggca ccatcttcat
      781 gccggtcacc acgccgcagc agaagataca gaaaacgcgg atcttcggcg gcgacgcgat
      841 cgagatcgtc ctgaacggcg attatttcga ccagacgctg gccgccgcgc aggcgttttc
      901 gtcccgcaac ggcgccgcct tcctgtcgcc cttcgacgcg cccgacgtga tcgagggtca
      961 ggcgacggtc gggctggaaa tgctggaaca actgggccgc gcgcccgatc tggtcgtgtt
     1021 gcccgtgggc ggcggtgggc tgtcatcggg cgtgacgcgc tatttcggga ccgaggcgcc
     1081 cgagacgtgc tttgcctttg cagaaccgtc cggcggcgcc agcctgcagg ccgcactgca
     1141 aaccggcgca cccgtcgccc ttcccgccgt ggacagcttc gtcgatggcg ccgcggtcgc
     1201 ccggatcggc gccctgccct tcgagatcct gcgccgcttc agccccgccg atgtccacct
     1261 ggcccccgag gatcgcatct gccgcaccat gctggagatg ctgaacaccg aaggcgtcgt
     1321 gctggaaccg gcgggcgcat tggccgtcga tgtgctgcag gatctggacg acatcgcggg
     1381 caagacgatc gtctgcgtct gttcgggcgg aaatttcgac ttcgagcggt tgcccgaggt
     1441 caaggaacgc gcccagcgct atagcggcgt gaaaaaatat ttcgttctgc ggatgccgca
     1501 gcgccccggc gcgctgcgcg actttctgga aatgctgggc ccggacgatg acatcgcgcg
     1561 gttcgaatac ctgaagaaat cggcgcgcaa tttcggctcg gtcctgatcg ggatcgagac
     1621 gaacgaaccc gcgaacctga ccgcgctgaa ggcccggctg gaccggaccg gctttgtcta
     1681 tcgcgacatc accaatgacg agattctggc cgaacttctg gtatagacgc cgcaggccct
     1741 gcatgatctg cagcatttga cgaattacgc cgggcgatct ttaccaatca ttcacggcgg
     1801 cgcgcctaga agcttggata tgaaagccga gactcgaaag cagcgcagcg tcaagaccgc
     1861 ggaatcgacc gcggccggca aggcgcgtct ggtcctgctg gtcatcggcg atccggatct
     1921 gcgccggatg ctggccagcc agttgcgcga
//
LOCUS       DTVW01000364            1601 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1456990, whole
            genome shotgun sequence.
ACCESSION   DTVW01000364 DTVW01000000
VERSION     DTVW01000364.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1601)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1601)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1601
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1456990"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..590
                     /locus_tag="EYO87_04875"
     CDS             <1..590
                     /locus_tag="EYO87_04875"
                     /inference="COORDINATES: protein motif:HMM:PF00296.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HIC65324.1"
                     /translation="GEPYSLNGARMSFPTPEPIPVYITALGSEVAAAAGRTADGILMS
                     AGFSVAFVAHCLKLFEDGASQAGRDPVALRNAAFIHFAVSADGTAARENVRRKLAFLF
                     RNRQMAENIAAAGIPIDQDAIVDAVAVRDMDKAAAYVPDEAIEAFGVAGTIADCRNSL
                     EAYLATGLQEPVIQVSGTAEEKSLALDVIRHFTGG"
     gene            complement(621..>1601)
                     /locus_tag="EYO87_04880"
     CDS             complement(621..>1601)
                     /locus_tag="EYO87_04880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015866085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P family protein"
                     /protein_id="HIC65325.1"
                     /translation="GGAAAAGACLIVRRGWRWVPLCMTMGGVWGIVPDMPRLLREDFP
                     SAPLAALLGDLGAAGARIGIEYAYLPAGDYERLKGLLPEAALIAADDLFDRLRRIKTA
                     DEVALLRRLARISDRAIAESFRAASVGSTEMDIAAALTRGVYAQGAEQFKLMIVATGP
                     RSELPNVGPTERVLEAGDICRVEIFAMIGGYHAGVCRTASVGAPRPEAARIWANLVAC
                     KHLILDMIGPGAGARAVYHAFLAKFDELGLPPISFVGHGIGLHLHEEPYLGKDKDYVL
                     EAGMVLGIEPLVYRTGLGFGLQLKDMVAVTGTGAELLSDVTDTDELLVIE"
BASE COUNT          274 a          577 c          518 g          232 t
ORIGIN      
        1 acggtgaacc ctacagcctc aacggcgccc gcatgtcgtt tccaaccccc gagccgatcc
       61 cggtctacat caccgcgctg ggcagcgaag tggcggcggc ggccgggcgc acggcggacg
      121 gcatcctcat gtcggcgggg ttctcggtgg ccttcgttgc ccactgcctg aagctgttcg
      181 aggacggtgc cagccaggcg gggcgcgatc cggtggcgct caggaacgcc gccttcatcc
      241 atttcgcggt gtcggcggac ggcacggcgg cacgcgagaa cgtgcggcgc aagctcgcct
      301 tcctgttccg caaccggcag atggcggaga acatcgccgc cgccggcatc cccatcgacc
      361 aggacgccat cgtggacgcg gtggcggtgc gggacatgga caaagccgcc gcctatgtgc
      421 cggacgaggc catcgaggcg ttcggtgtcg caggcaccat cgccgattgc cgcaacagcc
      481 tggaggccta tctcgccacc ggattgcagg aaccggtgat ccaggtcagc ggcacggctg
      541 aggaaaaatc actcgcgctc gatgtaatcc gccacttcac cgggggatga gggcgccgcc
      601 gcccccactt cggtaattga tcattcgatc accagcaatt catcggtgtc ggtgacgtcg
      661 gacagcagct cggcgccggt cccggtcacc gccaccatgt ccttgagctg cagcccgaag
      721 ccgagcccgg tccggtacac caaaggctcg atgccgagca ccataccggc ctccagcaca
      781 taatccttgt ccttgccgag ataaggttcc tcgtgcagat gcagaccgat gccgtggcca
      841 acgaaggaga tcggcggcag gcccagttcg tcgaatttcg ccaggaacgc gtggtagacc
      901 gcgcgcgcgc cggcgccggg tccgatcatg tccaggatca gatgcttgca cgcgacgagg
      961 ttggcccaga tgcgcgccgc ctcgggcctc ggcgcgccga ccgaggcggt gcggcagacg
     1021 cccgcgtgat agccgccgat catggcgaag atctcgaccc ggcagatgtc gcccgcctcc
     1081 agcaccctct cggttggccc cacattggga agctcgctgc gcgggccggt ggcgacgatc
     1141 atcagcttga actgctccgc gccctgggcg tagacgcccc gcgtcagcgc cgcggcgatg
     1201 tccatctcgg tgctgcccac tgatgcggcg cggaaggact ccgcgatcgc ccggtccgag
     1261 atgcgcgcga gccggcgcag cagcgcgacc tcgtcggccg tcttgatccg gcgcagccgg
     1321 tcgaacagat cgtccgccgc aatcaacgcc gcctcgggca gcagcccctt caaccgctca
     1381 taatcgcctg cgggaagata ggcgtactcg atgccgatcc ttgctccggc cgcgccgagg
     1441 tcgcccagca gcgccgccag aggggcgctg ggaaaatcct cgcgcagcag gcgcggcatg
     1501 tccggcacaa tcccccagac gccgcccatc gtcatgcaca acggcaccca acgccagccg
     1561 cgccgaacga tcaagcacgc ccccgcagcc gcggcgccgc c
//
LOCUS       DTVW01000365            1060 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1457112, whole
            genome shotgun sequence.
ACCESSION   DTVW01000365 DTVW01000000
VERSION     DTVW01000365.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1060)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1060)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1060
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1457112"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..191)
                     /locus_tag="EYO87_04885"
     CDS             complement(<1..191)
                     /locus_tag="EYO87_04885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019296021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HIC65326.1"
                     /translation="MLDESPLVSIEKLRVEFETNDGVVVGVKDVSFDIKPGECVCVVG
                     ESGSGKSVSSLSLMRLVEFG"
     gene            472..>1060
                     /locus_tag="EYO87_04890"
     CDS             472..>1060
                     /locus_tag="EYO87_04890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007800075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter substrate-binding
                     protein"
                     /protein_id="HIC65327.1"
                     /translation="MKLKTLLMGAAATLALAPAAMAERGSDGQLNIIMWQAPSTMNPY
                     LSGGTKDVIAASMVIEPLASFTADGKLTTRLAAELPSLENGGISEDLKTVTWKLKDGI
                     TWSDGTPLTADDVVFTANYCMDPEGGCAQLAKYEGIESVEAVDPLTVKVTFAEPHPDP
                     FSAFVGGQSPILQKAQFENCTGAAASTCTEQNFNPI"
BASE COUNT          231 a          339 c          327 g          163 t
ORIGIN      
        1 ccgaattcca ccagccgcat cagcgacagc gaggataccg acttgcccga acccgattcg
       61 ccgaccacgc agacgcattc gccgggtttg atgtcgaagc tgacatcctt gacgccgacc
      121 accacgccgt cgttggtttc gaattcgacg cggagcttct cgatggaaac caggggggat
      181 tcgtccagca tcgcggttcc tgtcctacgt tctgcccaaa ggctagtcag agcgcctcaa
      241 atgtcaaagc ggaatgcggc gccgatcggt tcgacgcgat agcacttgct ttcggcggcg
      301 ggatcggcag aagatgtgcc cattccgcag gcaacacggg acaggatgcc ggcccggaaa
      361 tccgggagag aagcaagaaa agacgatacc cgtcaacgga ttgagccgag atcagaacag
      421 gcggcacaga tcgccccggc cccgcggacc aacccccaac aggagagtgg aatgaaactg
      481 aagaccttgc tgatgggcgc ggcggcgacc ctcgcgcttg cccccgccgc catggccgaa
      541 cgcggctcgg acgggcagtt gaacatcatc atgtggcagg cgccctcgac catgaacccg
      601 tatctgtcgg gcggcaccaa ggacgtcatc gccgccagca tggtgatcga gccgctggcc
      661 agctttaccg ccgacggcaa gctgaccacg cgcctcgcgg ccgagcttcc gtcgctggaa
      721 aacggcggca tctcggaaga tctgaagacg gtgacctgga agctgaagga cggcatcacc
      781 tggtccgacg gcacgccgct gacggccgat gacgtggtct tcaccgcgaa ttactgcatg
      841 gacccggaag gcggctgtgc gcagctggcg aaatacgagg gaatcgaaag cgtcgaagcg
      901 gtcgatccgc tgaccgtgaa ggtgaccttc gccgaaccgc atcccgaccc gttctcggcc
      961 ttcgtcggcg gccagtcgcc gatcctgcaa aaggcgcagt tcgaaaattg caccggtgcg
     1021 gcggcatcga cctgcacgga acagaacttc aacccgatcg
//
LOCUS       DTVW01000366            2467 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1457125, whole
            genome shotgun sequence.
ACCESSION   DTVW01000366 DTVW01000000
VERSION     DTVW01000366.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2467)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2467)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2467
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1457125"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..496)
                     /locus_tag="EYO87_04895"
     CDS             complement(<1..496)
                     /locus_tag="EYO87_04895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018426289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HIC65328.1"
                     /translation="MTDRDAATTQDFDPWVATILLLLGNFMNLLDITIVNVALPSIQR
                     DLMASASQMEWVSAAYVLAFAAGLLPFGRFGDKLGRKRLFLWGVGLFTLASAVCGLAR
                     DMPMLIGSRAVQGLGGAMMVPQVMAIMHVIFPPDDKARAFALSAVVISLGAVTGPLLG
                     GALIT"
     gene            complement(570..1442)
                     /locus_tag="EYO87_04900"
     CDS             complement(570..1442)
                     /locus_tag="EYO87_04900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HIC65329.1"
                     /translation="MSGLVISLTTIPPRLPRIRPTLLDLLNQSAPVDEIRLYLPRRHR
                     RFPLAEAEIPDLPKGIRLILVDEDFGPATKVLPAARDLAGQDVELIFCDDDQAYDPDW
                     AGWFLEARRQHPDACLVQKGYNLEDRPEGTKYYPRHDPAHQPRAQRFRRDLRYRLRRA
                     ASLGTWRKKPFVKSGYLDILEGYRGAMIRPDFLPAEAWDIPETLWMVDDPWLSGHLLR
                     NGHPIWLIAEAPQPTRSHDARLLDGLKHFVDNGCDRRQADTMAIEYFRRRYGLWPDGK
                     PPQQAPDELPPRPA"
     gene            complement(1542..>2467)
                     /gene="cysC"
                     /locus_tag="EYO87_04905"
     CDS             complement(1542..>2467)
                     /gene="cysC"
                     /locus_tag="EYO87_04905"
                     /EC_number="2.7.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005616522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="adenylyl-sulfate kinase"
                     /protein_id="HIC65330.1"
                     /translation="MGGPREEVWHGLIRANHGATHFIVGRDHAGPGKNSAGEDFYGPY
                     EAQDLFRKYQDEIGVEMVDFKHMVYVQERAQYEPADEIEKGVTVLNISGTELRRRLRE
                     GLDIPDWFSFPEVVRELRRNSPPRARQGFTVFFTGLSGSGKSTIANALMVKLMEMGGR
                     PVTLLDGDVVRKHLSSELGFSKEHRDINIKRIGYVASEISKNGGIAICAPIAPYTATR
                     RAVREMTEAYGAFVEIHVATDLEECERRDRKGLYKLAREGKIKEFTGISDPYEEPQNP
                     ELRVDTKDRDVDGCAHQVLLTLESMGLIGLN"
BASE COUNT          448 a          818 c          765 g          436 t
ORIGIN      
        1 ccgtgatcag cgcgccgccc agcagcggcc cggtcacggc ccccagactg atcacgacgg
       61 cggacagcgc aaaggcccgc gccttgtcgt cgggcggaaa gatcacatgc atgatcgcca
      121 tcacctgcgg caccatcatc gcgccgccca ggccctggac cgcgcgcgat ccgatcagca
      181 tgggcatgtc gcgggccagc ccgcaaaccg ccgatgccag cgtgaacagc cccacgcccc
      241 acaggaacag ccgcttgcgg cccagcttgt cgccgaaccg gccgaacggc agcagcccgg
      301 ccgcgaaggc cagcacatag gccgccgaga cccattccat ctggctggcc gaggccatca
      361 gatcgcgctg gatcgaaggc agcgcgacat tcacgatggt gatgtcaagc aggttcatga
      421 aattgcccag aagcagcagg atcgtcgcca cccagggatc gaagtcctgc gtcgtggcgg
      481 cgtcgcgatc cgtcatgccc tgtcctttcg atgccttcgg caaggaacct gacccatgga
      541 ccgggcccgc tttgcgccgc cacccgaccc taggcgggac gtggcggcaa ttcgtccggt
      601 gcctgctgcg gcggcttgcc atcgggccac agaccatagc ggcggcggaa atactcgatc
      661 gccatggtat cggcctggcg ccgatcgcat ccgttgtcga cgaaatgttt cagcccgtcc
      721 agcagccgcg cgtcgtggct gcgggtcggc tgtggcgctt cggcgatcag ccagatcgga
      781 tggccattgc gcaacagatg gcccgacagc cagggatcgt caaccatcca caacgtctcg
      841 gggatgtccc acgcctcggc aggcaggaaa tcgggacgga tcatcgcacc gcgatagcct
      901 tcgaggatgt ccagatagcc acttttgaca aagggttttt tacgccacgt tcccagactt
      961 gccgcgcgcc gcaggcgata gcgcaggtcg cgccggaaac gctgcgcgcg cggctggtgg
     1021 gcgggatcgt ggcgcggata gtatttcgtg ccttcgggcc gatcctcgag attgtatccc
     1081 ttctgaacca ggcaggcgtc gggatgctgc ctgcgcgcct caaggaacca gcctgcccaa
     1141 tcgggatcat aggcctgatc gtcgtcgcag aagatcagtt cgacatcctg ccccgccaga
     1201 tcccgcgcgg ccggcagaac cttggtcgcg ggtccgaaat cctcgtcgac caggatcagc
     1261 cggatacctt tgggcaaatc gggaatctcg gcttcggcca gcggaaaccg gcggtggcgc
     1321 cgcggcagat acagccggat ctcgtccacc ggcgccgact gattcagcag atccagcagc
     1381 gtcggccgga ttcgcggcag acgcggcggg atggtcgtca gggaaatcac caggccggac
     1441 aagatgtctg ctccccacat tcgccacttg catcgatgcg acggccgcga aaccctgatg
     1501 cggccgtcgg aaatccgtga aatggccgga ccgcgcccgc ctcagttcag cccgatcaat
     1561 cccatgcttt ccagcgtcag cagcacctga tgggcgcatc catcaacgtc gcgatccttg
     1621 gtatcgacgc gcaattccgg gttttgcggc tcttcatagg gatcggaaat cccggtgaat
     1681 tccttgatct ttccctcacg cgccaacttg tagagcccct tgcggtcccg gcgttcgcat
     1741 tcttccagat cggtcgcgac atggatttcg acgaaggcgc cgtaggcctc ggtcatttcg
     1801 cggacggcgc ggcgggtggc ggtatagggc gcgatcggcg cgcagatcgc gatcccgccg
     1861 ttcttgctga tctcggaggc gacatagccg atccgcttga tgttgatgtc gcgatgttcc
     1921 ttggaaaagc caagctcgct ggacagatgc ttgcggacca catcgccatc cagcagcgtg
     1981 accggacggc cgcccatctc catcagcttg accatcagcg cgttggcaat ggtcgatttg
     2041 ccgctgccgc tgaggccggt gaagaacacc gtaaaacctt gccgcgcgcg cggaggcgag
     2101 ttgcggcgca gttcgcgcac cacttcggga aagctgaacc aatccgggat atccagcccc
     2161 tcgcgcaggc ggcggcgcag ttcggtgccg ctgatgttga ggacggtcac gcctttctcg
     2221 atctcgtcgg cgggttcgta ttgggcacgt tcctgcacat agaccatatg cttgaaatcg
     2281 accatctcga cgccgatctc gtcctgatac ttgcggaaca gatcttgcgc ctcgtaggga
     2341 ccgtagaaat cctcgcccgc actgttcttg cccgggccgg catggtcacg gccgacgatg
     2401 aaatgggtgg cgccgtgatt ggcgcggatc aggccgtgcc agacctcctc gcgcgggccg
     2461 cccatcc
//
LOCUS       DTVW01000367            1319 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1457256, whole
            genome shotgun sequence.
ACCESSION   DTVW01000367 DTVW01000000
VERSION     DTVW01000367.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1319)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1319)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1319
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1457256"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..555)
                     /locus_tag="EYO87_04910"
     CDS             complement(<1..555)
                     /locus_tag="EYO87_04910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010397394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HIC65331.1"
                     /translation="MIDPLSVFLLLLAAATPILFAALGELVVERAGVLNLGVEGMMIT
                     GALAGFAAAYVTGSPFAGFLAAALAGAAIAMLFAALTQILLANQVASGLALTLFGLGL
                     AALFGKPLEGIKAPAMMPGPLRINWIVWLGLVMAPLVWWFLNRSRTGLILRGVGENHD
                     AAHALGYPVHAIRIAAIGFGGAMAG"
     gene            complement(552..>1319)
                     /locus_tag="EYO87_04915"
     CDS             complement(552..>1319)
                     /locus_tag="EYO87_04915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HIC65332.1"
                     /translation="AAVALAAYPAEGMWIFPAMVLAGALGGWAWGMIPALLRNWFGAS
                     EILVSLMLVYVAQRVAAWMAFGPMKNPEGYGFPGSRNLQQYPAASNPELIAGTGAHWG
                     VVAAAAAVLAIWFLMSRHIRGFHIRAAGLAPRAARFAGVRPETLVAFCLGLSGAFAGM
                     AGLFEVAGPAGQITDKLGTGYGFTAIIVAFLGRLHPVGILLAGLLLALTYIGGELAQL
                     TLQLPAATVQVFQGMLLFFLLGFDLLTRFRIARRIAA"
BASE COUNT          272 a          463 c          431 g          153 t
ORIGIN      
        1 gcccgccatg gcgccgccga aaccgatcgc cgcaatgcgg atcgcgtgca ccggatagcc
       61 aagggcgtgg gccgcgtcgt ggttttcgcc caccccgcgc agaatcaggc ccgtccgcga
      121 gcggttcagg aaccaccaga ccagcggcgc catcacaagc cccagccaga cgatccagtt
      181 gatgcgaagc ggtccgggca tcatggcggg ggccttgatc ccctccagcg gcttgccgaa
      241 cagcgccgcg aggcccaggc cgaaaagcgt cagcgcaaga cccgaggcga cctgattggc
      301 cagcaggatt tgcgtcagag ccgcgaacag catcgcgatc gcggcccctg ccagcgccgc
      361 cgccagaaag cccgcgaaag gactgccggt cacataggcc gcggcaaagc ccgccagtgc
      421 gccggtgatc atcatcccct cgacacccag gttcagaacg ccggcgcgtt ccaccaccaa
      481 ctcgccaagg gcggcaaaga ggatcggcgt ggccgcggcc agaagcagca ggaagaccga
      541 aagcgggtcg atcatgcggc gatcctcctg gcgatgcgaa agcgggtcag aagatcgaaa
      601 cccagcagga agaacagcag cattccctga aatacctgga ccgtggcggc gggcaattgc
      661 agcgtcagct gcgccagctc gccgccgata taggtcagtg ccagcagcag gcccgccagc
      721 aggatgccga ccggatgcag ccggcccaga aaggccacga tgatcgccgt gaaaccgtag
      781 cccgtgccca gcttgtcggt gatctggccg gcggggcccg ccacctcgaa cagccccgcc
      841 atgccggcga aggcgcccga aaggccaagg cagaaggcca ccagcgtttc gggtctgacc
      901 ccggcgaaac gggccgcgcg cggtgccaga cctgcggcgc ggatatggaa gccccggatg
      961 tgacggctca tcaggaacca gattgccagg acggcggcgg cggcggccac gacgccccaa
     1021 tgcgcgccgg tgcctgcgat cagttcgggg ttcgatgcgg ccggatattg ctgcaggttg
     1081 cgcgatcccg gaaagccata gccttcgggg ttcttcatcg gcccgaaggc catccacgcc
     1141 gccacgcgct gcgccacata gaccagcatc agcgagacaa ggatttccga ggcgccgaac
     1201 cagttgcgca gcaaggccgg gatcatgccc caggcccaac cgcccaatgc gcccgccagc
     1261 accatggcgg gaaagatcca catgccctcg gcgggatagg ccgccagcgc gaccgccgc
//
LOCUS       DTVW01000368            2222 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1457344, whole
            genome shotgun sequence.
ACCESSION   DTVW01000368 DTVW01000000
VERSION     DTVW01000368.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2222)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2222)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2222
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1457344"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..477)
                     /locus_tag="EYO87_04920"
     CDS             complement(<1..477)
                     /locus_tag="EYO87_04920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011749091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihY/virulence factor BrkB family protein"
                     /protein_id="HIC65333.1"
                     /translation="MLSLIRDLWSFWSAIFERMDKIHMGLIAAGVAFYAMFAVFPGLA
                     AIIALWSLWFDPTVIMAYVDVAHEFLPEGAAKLIDGQVRSLTSAENTSIGWASFISFM
                     VATIAARAGVDALVRGLNAAYGVRSHSTIFGFILAYGLTLAIVGISLAGLATIVIVP"
     gene            complement(533..1234)
                     /gene="dnaQ"
                     /locus_tag="EYO87_04925"
     CDS             complement(533..1234)
                     /gene="dnaQ"
                     /locus_tag="EYO87_04925"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011749090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit epsilon"
                     /protein_id="HIC65334.1"
                     /translation="MREIVLDTETTGFDAEKDDRIVEIGALELINHLPTGRTFHVYIN
                     PGRPMPQEAFEIHGLGDDFLRDKPGFAEIAQSFVDFVAEDARLVIHNASFDMKFLNAE
                     LRRAGFPTLPWSRALDTLALAREKFPGSPSSLDALCRRFGVDNSNRDLHGALLDSELL
                     AEVYLELIGGRQPDLVLDRPGATGTDQRQAAGLIRRAPRPAPLPPRLTEAEAAAHAEF
                     TARMGEASLWLRFGT"
     gene            complement(1227..1814)
                     /locus_tag="EYO87_04930"
     CDS             complement(1227..1814)
                     /locus_tag="EYO87_04930"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HIC65335.1"
                     /translation="MSFLLGLTGGIGMGKSTTARMFRDLGHPVWDADQAVHDLYARGG
                     AAVEPVAAAFPEALKDGAIDRPALKQALGADPAALKRLESIVHPLVAADRRAFVARHS
                     DAALVVLDIPLLFEGDGQGQLDGVAVVSTDSETQRRRVLERPGMNRDTLQMILDRQMP
                     DVRKRALADWIIPTDTPEGARAAVEAICKEIAAHA"
     gene            complement(1811..>2222)
                     /locus_tag="EYO87_04935"
     CDS             complement(1811..>2222)
                     /locus_tag="EYO87_04935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011749088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HIC65336.1"
                     /translation="VASLLDSGVRELRISNRTRIRSEQIKSEFGARLVVYDWAQAGNM
                     LEGAGLVVNATSLGMTGKQPLRVPLDALSPQALATDLVYTPLETPFLAAARQIGCHTV
                     DGLGMLLHQAAPGFERWFGHRPDVDEETRRVVLG"
BASE COUNT          399 a          729 c          750 g          344 t
ORIGIN      
        1 cggcacgatg acgatggtcg caagcccggc cagcgagatg ccgacgatgg ccagggtcag
       61 cccataggca aggatgaagc cgaaaatggt ggaatgcgag cggacgccgt aggccgcgtt
      121 gagcccgcgc accaacgcat cgacccccgc gcgcgccgcg atggtcgcca ccatgaacga
      181 gatgaacgag gcccagccga tcgaggtgtt ctcggccgag gtcagcgacc gcacctgtcc
      241 gtcgatcagc ttggcggcgc cttcgggcag gaattcgtgg gccacgtcga cataggccat
      301 gatcaccgtc gggtcgaacc acaggctcca cagcgcgatg atcgcggcca gtccgggaaa
      361 gaccgcgaac attgcataga aggcgacccc tgccgcgatc aggcccatgt ggatcttgtc
      421 catccgctcg aagatggcgg accagaaact ccacagatcg cggatcaggc tcagcatctg
      481 gcccccttcg cgcccggccg ggccgcggga tcgcggcggg ggcgcaacga tctcatgtgc
      541 cgaaccgcaa ccacagcgaa gcctcgccca tccgtgccgt gaattcggcg tgggcggcgg
      601 cctcggcctc ggtcaggcgg ggcggcaggg gcgcggggcg cggggccctg cggatcagac
      661 cggcggcctg tcgttgatcc gtgcccgttg cgccgggacg gtccagcacc agatcgggct
      721 ggcggccgcc gatcagttcc agatagacct cggccagcaa ttccgaatcc agcaatgcac
      781 cgtgcagatc gcggttggaa ttgtccacgc cgaagcggcg gcaaagcgcg tccagagacg
      841 agggcgagcc gggaaatttc tcgcgcgcca gcgccagcgt gtccagagcc cgcgaccagg
      901 gaagcgtggg aaaccccgcc cggcgcagtt cggcattcag gaatttcatg tcgaagctgg
      961 cattgtggat caccagccgc gcatcctcgg cgacgaaatc gacgaagctt tgcgcgatct
     1021 cggcgaaacc gggcttgtcg cgcaggaaat cgtcgccaag cccgtgaatc tcgaacgcct
     1081 cttgcggcat cgggcgtcct gggttgatgt agacgtggaa ggtacggccg gtgggcagat
     1141 gattgatcag ttccagtgcg ccgatctcga cgatgcggtc gtccttctcg gcgtcgaagc
     1201 cggtcgtttc cgtatccaga acgatctcac gcatgggcgg cgatctcctt gcagatggct
     1261 tcgacggcgg cgcgcgcgcc ctctggtgta tcggtcggga tgatccagtc ggcaagcgcg
     1321 cgtttccgca catccggcat ctgccggtcc aggatcatct gcagggtgtc gcgattcatg
     1381 ccggggcgtt ccagcacccg cctgcgctgt gtctcggagt cggtgctgac gacggcgacg
     1441 ccgtcaagct ggccctggcc atcgccctcg aacagaagcg ggatgtccag gacgacaagt
     1501 gcggcatcgg aatggcgcgc gacaaaggcc ctgcggtcgg cggcgacaag cggatggacg
     1561 atggattcca gccgtttcaa cgccgccgga tcggccccga gcgcctgttt cagcgccgga
     1621 cggtcgatgg cgccgtcctt cagcgcctca gggaaggcgg cggcgacggg ttcgaccgcc
     1681 gcaccgcccc tggcatagag atcgtgcacg gcctgatcgg cgtcccagac cggatgtccc
     1741 agatcgcgaa acatccgcgc cgtcgtggac ttgcccatgc cgatgccccc ggtcagtccc
     1801 agaagaaagc tcatcccagc accacgcggc gggtttcctc gtcaacatcg gggcggtggc
     1861 cgaaccagcg ttcgaagccg ggggcggcct gatgcagcaa catccccagc ccgtccacgg
     1921 tgtgacagcc gatctggcga gcggcggcga gaaacggcgt ttccagcggg gtatagacca
     1981 gatcggtggc cagcgcttgc ggcgacagag cgtccagcgg cacccgcagc ggctgcttgc
     2041 cggtcatgcc cagcgaggtg gcgttcacga ccagaccggc cccttccagc atgttgccgg
     2101 cctgcgccca gtcatagacg accagacgcg cgccgaattc ggacttgatc tgttccgacc
     2161 ggatccgggt gcggttgctg atcctcaatt cgcggacgcc gctgtccaga agcgaggcga
     2221 cg
//
LOCUS       DTVW01000369            1219 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1458285, whole
            genome shotgun sequence.
ACCESSION   DTVW01000369 DTVW01000000
VERSION     DTVW01000369.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1219)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1219)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1219
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1458285"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1171)
                     /locus_tag="EYO87_04940"
     CDS             complement(<1..1171)
                     /locus_tag="EYO87_04940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65337.1"
                     /translation="MAPPRIFDPTAFKAQGALITTRALFKGFPRPPTDLSDAPRLVFL
                     RWQVNPRIGMPVEPFKVWRRQAIQVEETAIEPERLTLPPLGQIHVMPEPMVSLSLDLR
                     AGSSGAAGNVVFFADGIGFENILAILPYNLGANGATVMRFQAAYVTAILILGTGSVQG
                     FAGLPQSAADKIGGWELVETVGLPVDEGGWSDLADQNHGVKQGLVGAEVPAPDAAAQR
                     YARGINPFGWHQTFPTGEIAPAWTLPSPKDLIADADTQLLPMLHEAMRLPPADQAGFT
                     RDFQINPPENPSGQQMSGDPGRATIAPLTLLQMTVSTDPLQAVTLGFGTGYLYEDIPG
                     ITLGAMSFFDDKGVSDWDFMVTGLWRGEGMRAGREVEFAALIPRPRLVLPPPAPAD"
BASE COUNT          200 a          401 c          429 g          189 t
ORIGIN      
        1 gatcggcggg ggcgggtggc ggaaggacca ggcgcggtcg cgggatcagg gccgcgaatt
       61 cgacctcgcg cccggcccgc atcccctcgc cgcgccacag gccggtgacc atgaaatccc
      121 agtcgctgac gcccttgtca tcaaagaacg acatcgcgcc cagcgtgatg ccgggaatgt
      181 cctcgtaaag atagccggtt ccgaacccca gcgtgacggc ctgcaacgga tcggtcgaaa
      241 ccgtcatctg cagcaatgtc agcggcgcga tggtggcgcg gccgggatcg ccgctcatct
      301 gctggcccga gggattttcg ggcgggttga tctggaaatc gcgggtgaac ccggcctggt
      361 cggcgggggg cagccgcatc gcctcgtgca gcatgggcaa aagctgggtg tcggcatccg
      421 cgatcagatc cttgggcgac ggcagcgtcc aggcgggcgc gatctcgccc gtgggaaagg
      481 tctggtgcca gccgaagggg ttgatgccgc gcgcatatcg ctgggctgcg gcgtcgggcg
      541 ccggcacctc ggcgcccacg aggccctgct tgacgccgtg gttctggtcg gcgagatcgg
      601 accagccgcc ttcatcgacc ggcagcccga ccgtttcgac cagctcccat cccccgatct
      661 tgtcggccgc cgattgcggc aggcccgcga aaccctgcac gctgccagtg cccaggatca
      721 ggatcgcggt gacgtaggcc gcctgaaagc gcatcacggt cgcgccgttc gcgcccagat
      781 tatagggcag gatcgcgagg atgttctcga acccgatgcc gtcggcgaaa aagaccacat
      841 tgcccgccgc gcccgaagat ccggcgcgca ggtccagcga cagcgacacc atcggctcgg
      901 gcatgacatg gatctgtccc agcggcggca gggtcaggcg ttcgggttcg atcgcggttt
      961 cctcgacctg gatggcctgg cggcgccaga ccttgaacgg ttcgaccggc atcccgatac
     1021 gcggattgac ctgccagcgc aggaagacca ggcgcggcgc gtcgctgaga tcggtgggcg
     1081 ggcgcggaaa gcccttgaac agagcgcgcg tggtgatcag cgcgccctgc gccttgaatg
     1141 cggtcggatc gaagatgcgc ggcggtgcca tgtcagtcct cttcctccca tggcgcgcgg
     1201 gccagcgtct cggccagga
//
LOCUS       DTVW01000370            2375 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1458439, whole
            genome shotgun sequence.
ACCESSION   DTVW01000370 DTVW01000000
VERSION     DTVW01000370.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2375)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2375)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2375
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1458439"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            10..621
                     /locus_tag="EYO87_04945"
     CDS             10..621
                     /locus_tag="EYO87_04945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane integrity-associated transporter
                     subunit PqiC"
                     /protein_id="HIC65338.1"
                     /translation="MIAALGLLALAACSNPEKTARYLIDPPATGDMVANRLGTAELKD
                     VSLPEYASGQEVSWQTPDGAVRSTPDDLWADSPQRAFTLSLARAISDVSGATVIGEPW
                     PLAQPPQRVLEVRVEKALAQANNIYRLSGRYFVSDEGSGGSNQARSFDISVPMAGEQP
                     AAVAAAVSQAIALLARQIATLSGPGRSIATRTQADPFAVNPLF"
     gene            complement(761..1243)
                     /locus_tag="EYO87_04950"
     CDS             complement(761..1243)
                     /locus_tag="EYO87_04950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65339.1"
                     /translation="MTSQPVSNFNHVIAALQLLGAGPGGAENEPVRRALETLNAAYPG
                     RSGTEAPLPGPDRPTWAAFRRLERENQLLIDHAEMLACALGACPNCWGRLHDCEECGG
                     LGRPGAFNPDRACFDHLVLPVICRVMGYDPTEASDHGADPQSRPEGSPDGVRPLSSSL
                     "
BASE COUNT          382 a          818 c          819 g          356 t
ORIGIN      
        1 accgccccgc tgatcgcggc ccttggcctt ctggcgctgg cggcctgttc caacccggaa
       61 aagaccgccc gctatctgat cgacccgccc gccaccggcg acatggtcgc gaaccggttg
      121 ggcacggccg aactgaagga cgtgtcgctg cccgaatatg cctcggggca ggaggtttcc
      181 tggcagacgc ccgatggcgc ggtgcgttcc acgccggacg atctgtgggc cgacagcccg
      241 caacgggcct ttaccctcag cctggcgcgc gcgatttcgg acgtctcggg cgcgacggtg
      301 atcggcgagc catggcccct ggcccagccg ccacagcgcg tgctggaggt gcgggtcgaa
      361 aaggcgctgg cgcaggcgaa taacatctat cggctgtcgg gacgctattt cgtctcggac
      421 gagggcagcg gcgggtccaa ccaggcccgc agcttcgaca tttcggttcc gatggcgggc
      481 gaacagcccg ccgccgtggc tgccgccgtc tcgcaggcca tcgcgctgct ggcccgccag
      541 atcgcgacct tgtcagggcc gggccgcagc atcgccaccc ggacccaagc cgatcccttt
      601 gccgtgaacc cgctgttcta ggccgccgac gatccgtgcg gcatcagtca tcccgccctc
      661 gtcccggtcg ccgtgacgcc gaaggcgaaa agggcggacg gtccgaagac cgtccgccca
      721 gggccgcccg caagcgggac gtcgagcagg gaggaactcg ttacaaggaa ctgctcagcg
      781 ggcggacccc gtccggactg ccttcgggac gggattgcgg gtctgcgccg tgatcggacg
      841 cttcggtggg atcatagccc atgacgcgac agatgacggg caggacaagg tgatcgaaac
      901 aggcgcggtc gggattgaag gcgcccggtc ggcccagacc gccgcattcc tcgcaatcat
      961 gcagcctgcc ccagcagttc gggcaggcgc caagcgcgca ggccagcatc tcggcgtgat
     1021 cgatcagcaa ttggttctcg cgttccaggc ggcggaacgc ggcccaggtc gggcggtcgg
     1081 gaccgggtag aggagcctcg gtcccggacc gccccggata cgccgcattc agggtttcca
     1141 gtgcgcggcg gaccggctca ttctctgcac cccccggtcc ggcgcccaga agctgaagcg
     1201 cggcgatcac gtgattgaaa ttcgacacag gctgactggt catatcggtc acttcctctt
     1261 ctctgacgcg ggtcttgcca aggtcttttc cgcgtcgtcc tgaggcggtt atcgggctgc
     1321 gccgtgaaaa cagcgtgaat cccgccgcgt gaaaccgcca cgaacgcggc aggacagcag
     1381 tcgagaaggg ccttttttac cctagaaggg caaaaaccgg tcgattccgt ccagaaccgg
     1441 cgtcgggttc ggctgggcgg cgtgaagttg ggccagggtg cgaatcgcgc cccggtcggc
     1501 gggcgcgtcg cccgcggcaa ggcgtgccgc cagccagcgg gcgaattgcg gcgcggccag
     1561 cgacgttccc gcctggatcg agaatccgcc gctggcgcgc ccgcgcacga tcattccgct
     1621 caggccatgc gagcgatcga ccggcagcag gcaatccccg ccctggccat cgcccagcgt
     1681 cgaacaatag gatgtcagcg acagtcccgc cgcctcgacc gcgccggcgc ggattggccg
     1741 cgcgccgccg gcataggtgt tgaaggcacc gtcccgcacc acacgcgcgc cgctggcggg
     1801 cggatcggac aggatcggcc gtccggcctc gtcctcggcg cggtaggcag gatcatggag
     1861 cgagctttgc cgggcctcgc gggggaagcc tcggatcact tcgtcacgct ggaccgaggt
     1921 ctcgtaaacc ccgtccaacg atcccggtgc gatcccgacg cgccattcgc cgggcatcgc
     1981 ccagggctct ccggggaatt gcggacaggt cggattgacg atcaccgtcg ccccctcgcg
     2041 ccagcgaccg ttctccagca ggcgcggcgt gtagtaggcg cggcccagct cggccccgtc
     2101 cgcgccggtc agcagcgaat attgccaggg cgcagtgaag gcagtggtcg tcggggcaag
     2161 gcccggcggc gtcacggtga tctggaacct gccatcgggc gggccgtcat ggaccgggcc
     2221 ccagatctcg atcggggtga tggtgcgatc gtccggctgg atgcgccagc cgatgtcctc
     2281 gcccggcttc agccgcgcga acagccgaga ctgccggttg ttgcccgtgg gcaaaacgaa
     2341 atggaccgga cccagatcgg cagcggcgac cgccg
//
LOCUS       DTVW01000371            1027 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1459541, whole
            genome shotgun sequence.
ACCESSION   DTVW01000371 DTVW01000000
VERSION     DTVW01000371.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1027)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1027)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1027
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1459541"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..504)
                     /locus_tag="EYO87_04955"
     CDS             complement(<1..504)
                     /locus_tag="EYO87_04955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007197892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IclR family transcriptional regulator"
                     /protein_id="HIC65340.1"
                     /translation="MNDLFGTDRRFATTLSRGLSVLRAFRPSDDGLGNAEIAARTGLP
                     KSTVSRLTYTLQALGYLTHARHGDRYRPGPALLALGNVAAASISFVELAGPIMQRLAD
                     RTGTLALLAVRDREKLLLTKAWRPEGVSSIWLEVGHRLPLLGSSSGHCFLAALPDDAL
                     AGLAQEGG"
     gene            complement(522..>1027)
                     /locus_tag="EYO87_04960"
     CDS             complement(522..>1027)
                     /locus_tag="EYO87_04960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007197891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HIC65341.1"
                     /translation="TFAELWAALRETGIQTTSIFFIAAAAKIFVAFIALTGVAPEIVN
                     AVTNAEPNVIVLMFAIAAIYLALGMFLDPIGIMVLTLPLMVPLVESYGLDLIWFGVVV
                     IKLLEIGLITPPVGLNVFVISSVVGKEVPIDRIFSGILRFLTIDILVLIIIMAVPMLS
                     LIIPQSM"
BASE COUNT          201 a          342 c          333 g          151 t
ORIGIN      
        1 cccgccctcc tgcgccagtc cggccagggc gtcgtccggc aacgcggcga ggaaacagtg
       61 ccccgaagac gatccaagaa gcggcagcct gtgacccacc tccagccaga tcgagctgac
      121 cccctcgggc cgccaggcct tggtcaacag caacttctcc cggtcgcgga cggccagcag
      181 cgccagcgtc ccggtcctgt ccgccagtcg ctgcatgatc ggcccggcca gttccacgaa
      241 cgagatcgac gccgccgcca cattgcccag cgcaagcagc gccggacctg gacggtagcg
      301 gtcgccgtgg cgggcgtgcg tcaggtagcc cagcgcctgg agcgtatagg tcagccgcga
      361 cacggtggat ttcggcaggc ccgtccgcgc cgcgatctca gcgttgccca gcccgtcgtc
      421 ggagggacga aaggcgcgca ggacggaaag gccacgtgac aatgtggttg cgaagcggcg
      481 gtcggttccg aagaggtcgt tcatggtcgg cgcagcgctc tctacatgga ttgcgggatg
      541 atgagcgaca gcatcggcac cgccatgatg atgatgagca ccaggatgtc gatggtcagg
      601 aaccgcagga tccccgagaa gattcggtcg atcggcacct ccttgcccac cacgctggag
      661 atcacgaata cgttgaggcc aacgggcggc gtgatcagcc cgatctccag cagcttgatc
      721 accaccacgc cgaaccagat caggtccaga ccgtagcttt ccaccagcgg caccatcagc
      781 ggcagggtca gcaccatgat cccgatggga tcgaggaaca tgcccagcgc caggtagatt
      841 gccgcgatgg cgaacatcag gacgatcacg ttcggctctg cgttggtgac cgcgttgacg
      901 atctccggcg ccacgccggt cagcgcgatg aaggccacga agatcttggc cgccgcggcg
      961 atgaagaaga tcgaggtcgt ctggatcccc gtctcccgca gggcggccca gagctctgcg
     1021 aaggtca
//
LOCUS       DTVW01000372            1217 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1460982, whole
            genome shotgun sequence.
ACCESSION   DTVW01000372 DTVW01000000
VERSION     DTVW01000372.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1217)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1217)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1217
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1460982"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..644
                     /locus_tag="EYO87_04965"
     CDS             <1..644
                     /locus_tag="EYO87_04965"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352559.1"
                     /note="Catalyzes the rate-limiting step in dNTP synthesis;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="vitamin B12-dependent ribonucleotide reductase"
                     /protein_id="HIC65342.1"
                     /translation="EIFIDMHKEGAGFRAMMNNFAIAVSVGLQYGVPLEEFVDAFTFT
                     RFEPAGMVQGNDSIKNATSILDYVFRELAVSYLDRTDLAHVKPEGASFDDLGGGEHEG
                     QNLAPVTEQAELKSLTMLKQISSAGYLRKRLPQDLMVLQGGASRTAVATGMAEGGAGF
                     QAAPVAAAPIDQRKKAKMQGYEGDPCGECGNYTLVRNGTCMKCNTCGGTSGCS"
     gene            complement(871..>1217)
                     /locus_tag="EYO87_04970"
     CDS             complement(871..>1217)
                     /locus_tag="EYO87_04970"
                     /inference="COORDINATES: protein motif:HMM:PF02417.13"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="chromate transporter"
                     /protein_id="HIC65343.1"
                     /translation="TFAGWLGQIAGGPAGAIIGLIAIFLPGFLLMAAALPFWSAISAS
                     HRARHAGAGANAAVVGVLGAALYDPVFTGGVTQSGDFALAVTLFLMLSLWRRPAWQVV
                     ITGALGGMALAL"
BASE COUNT          231 a          411 c          399 g          176 t
ORIGIN      
        1 gcgagatctt catcgacatg cacaaggaag gcgcgggctt ccgggcgatg atgaacaatt
       61 tcgccatcgc cgtatcggtc ggcctgcaat acggcgtgcc gctggaggaa tttgtcgatg
      121 cctttacctt cacccggttc gaaccggcgg ggatggttca gggcaatgac agcatcaaga
      181 acgccacctc gatcctggat tacgtgttcc gcgaactggc ggtcagctat ctcgaccgca
      241 ccgatctggc ccatgtgaag ccggaagggg cgtcattcga cgatcttggt ggcggcgaac
      301 acgagggtca gaacctggcc ccggtgaccg agcaggccga actgaaatcg ctgaccatgc
      361 tgaagcagat cagcagcgcc ggatatttgc gcaaacgctt gccgcaggac ctgatggtgc
      421 tgcagggcgg cgcttcgagg acggcggtcg ccaccggcat ggccgaaggc ggcgccggct
      481 ttcaggccgc cccggtcgcg gctgcgccga tcgaccagcg caaaaaggcc aagatgcagg
      541 gctacgaggg cgatccttgc ggcgaatgcg gcaattacac gctggtccgc aacggcacct
      601 gcatgaagtg caacacctgc ggcggcacct caggttgtag ctgaaccgac tgcgcggggc
      661 ctgtcgcagg ccacgcattg ccatgtcagg ccaggtcgcg ggtttccctc ctccctctcg
      721 cgcccctatc gaagcagatg cgtccggcaa gaggcgcagc ctgaccccag ccccccgcgc
      781 cgtggcagcg agacgcgggg ggtctttcat tcgcgaatgg ccggatgccg gcctggactg
      841 gccggtcctg accccggctg atccggaccg ctagagcgcc agcgccatcc cgccgagcgc
      901 gcccgtgatc acgacctgcc aggccggtcg ccgccacaag gacagcatca ggaacagggt
      961 caccgccagc gcgaaatccc cggattgcgt gacgccgcct gtaaagaccg gatcataaag
     1021 cgccgcgccc agcacgccca cgaccgccgc gttcgcgccg gcgccggcgt ggcgcgcccg
     1081 gtgactggcc gaaatcgccg accagaaggg cagggcggcc gccatcagca gaaatcccgg
     1141 caggaagatc gcgatcaggc cgatgatcgc gcccgccggg ccgcccgcga tctgtcccag
     1201 ccagccggca aaggtga
//
LOCUS       DTVW01000373            3543 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1461134, whole
            genome shotgun sequence.
ACCESSION   DTVW01000373 DTVW01000000
VERSION     DTVW01000373.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3543)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3543)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3543
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1461134"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..465)
                     /locus_tag="EYO87_04975"
     CDS             complement(<1..465)
                     /locus_tag="EYO87_04975"
                     /inference="COORDINATES: protein motif:HMM:PF12802.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HIC65344.1"
                     /translation="MPSADVTSGDRSRNERLILSLIRRHGPLSRAALAQAMDLSPQAI
                     TNLSRKLIEQGFLAQEKVVRGKVGQPSTPLALAPDGAWFLGLKLGRRLAELALVDFTG
                     QTKLHRQEISSYLHPQRVLGFARHGIATFMANLPRSAHRRIAGLGIATPFRLW"
     gene            585..1613
                     /locus_tag="EYO87_04980"
     CDS             585..1613
                     /locus_tag="EYO87_04980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter substrate-binding protein"
                     /protein_id="HIC65345.1"
                     /translation="MTMTHLIRLSLAASALAMTAGLAQAQEPVKACLITKTDINPFFV
                     KMKEGATAKADELGMQLMSFAGKVDGDHETQQQAMESCIAAGVKGILITASDTKAIVD
                     SVKQAQDRGILVIALDTPLDPIDAADATFATDNYEAGRLIGAWAKGKMGEEAANARIA
                     FLDLSESAPSVDVLRDQGFMEGFGIDVKDKNTIGDEDDPRIVGHEVTSGNEEGGRQAM
                     EALLQKDPGVNLVYTINEPAAAGAYEALKSFGKEKDALIVSIDGGCPGVQNVKEGVIG
                     ATSQQYPLKMASMGIEAIAAFAKDGTRPQASEGLDFTDTGVNLVTDQPVEGVPSITVA
                     EGTDQCWG"
     gene            1700..2755
                     /locus_tag="EYO87_04985"
     CDS             1700..2755
                     /locus_tag="EYO87_04985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008884732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HIC65346.1"
                     /translation="MSDAPDPPAERSATESVASFEQHSRGPLESLQHFLHRYPTMVPV
                     IVLVLSLIAFGLIAPNFFSAFNLSLIMQQVAVVGTLAAAQSLVILTAGIDLSVGAVMV
                     MISVVMGRLSLDLGIPVPISILLGLGCGLLTGGLNGLLVTRLKLPPFITTLGTWNIFL
                     ALNYYLSGRETIRSQTLDAEAPLLKLFGARFNLGGAVLTWGVVLMLIVFAVLWYALNK
                     TAWGRRVYAVGDDPEAAALAGIQTRRVLMSVYMTAGFICALAAWSSIGRVGSVSPTSF
                     FESNLESITAVVIGGISLFGGRGSILGPLIGALIVGVFNSGLRLAGVDVLWQLFATGW
                     LIIVAVAVDQWIRKISS"
     gene            2752..3525
                     /locus_tag="EYO87_04990"
     CDS             2752..3525
                     /locus_tag="EYO87_04990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012177067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter ATP-binding protein"
                     /protein_id="HIC65347.1"
                     /translation="MTEPLLTARNIVKRYGRVTAIDHADFDLFPGEILAVIGDNGAGK
                     SSLIKAVSGAVQPDEGEIRLDGRPVSFDSPLQARKAGIETVYQTLALSPALSIADNIF
                     MGREIRKEGVMGRWFRMLDKAAMDKFARDKLSELGLMTIQNIGQPVETLSGGQRQGVA
                     VARAAAFGSRVIILDEPTAALGVKESRRVLDLILDVRSRGIPIVLISHNMPHVFEVAD
                     RIHIHRLGKRLCVIDPKDHSMSDAVAYMTGAKIPDEAAA"
BASE COUNT          615 a         1099 c         1184 g          645 t
ORIGIN      
        1 ccacaatcgg aagggtgtgg cgatgccgag gccggcgatc cggcggtgcg ctgatcgcgg
       61 cagattggcc atgaaggtgg cgatcccgtg ccgcgcgaag cccagaaccc gctgggggtg
      121 cagataggat gatatctcct ggcggtgaag tttcgtctgg ccggtgaaat cgaccagcgc
      181 cagttcggcc agtctgcgac ccagcttcag ccccagaaac caggccccgt ccggcgccag
      241 cgccagcggc gtcgaaggtt gaccgacctt gccgcgcacg accttttcct gcgccagaaa
      301 gccctgttcg atcagcttgc ggctgaggtt ggtgatcgcc tgcggcgaca agtccattgc
      361 ctgggccagc gccgcgcgcg acagcggtcc gtggcgccgg atcagcgaca ggatcagccg
      421 ctcgttccgg ctgcgatcgc cgctggtcac gtctgcgctc ggcattcaga gatcctcctg
      481 ccgggtatta atcaagcaaa ttgatttatt gacaagcgga aagatgtaag gctttgtatc
      541 ggccagggcg gaagaggaat ccgccgtcgt ggaggagtgt agaaatgacg atgacacatc
      601 tgatccgtct gtcgctggcg gcgtcggcgc tggccatgac cgccggtctg gcacaggcac
      661 aggaaccggt gaaggcctgt ctgatcacca agaccgatat caacccattc ttcgtgaaga
      721 tgaaggaagg cgcgaccgcc aaggcggatg aacttgggat gcagttgatg agcttcgccg
      781 gcaaggtcga cggcgatcac gagacccagc agcaggcgat ggaaagctgc atcgcggcgg
      841 gcgtcaaggg catcctgatc accgcctcgg acacgaaggc catcgtcgat tcggtcaagc
      901 aggcgcagga tcgcgggatc ctggtcatcg cgctggatac gccgctggac ccgatcgacg
      961 cggccgacgc cacctttgcc accgacaatt acgaggccgg ccgcctgatc ggcgcctggg
     1021 ccaagggcaa gatgggcgag gaggccgcga acgcaaggat cgccttcctc gatctgtccg
     1081 aaagcgcgcc ctcggtcgat gtgctgcgcg accagggttt catggagggc ttcggcatcg
     1141 acgtgaagga caagaacacg atcggggacg aggatgatcc gcgcatcgtc ggccatgagg
     1201 tgacttcggg caacgaagag ggcggccgtc aggcgatgga ggccctgttg cagaaggatc
     1261 ccggcgtcaa tctggtctat acgatcaacg aacccgccgc cgcgggcgcc tatgaggcgc
     1321 tgaaatcctt cggcaaggaa aaagacgcac tgatcgtgtc gatcgatggc ggctgtccgg
     1381 gcgtccagaa cgtcaaggag ggcgtgatcg gcgcgacctc gcagcaatat ccgctgaaga
     1441 tggcctcgat ggggatcgag gcgatcgccg ccttcgccaa ggatggcacc aggccccagg
     1501 ccagcgaggg actggatttc accgataccg gcgtgaacct tgtcaccgat cagccggtcg
     1561 agggcgtccc gtcgatcacc gtggccgagg gaaccgatca gtgctggggc tgatacctgg
     1621 ctgagcgacg tcttccagtc acgcaatccg ggcggcgcgt cacgccgcgc cgcccatcac
     1681 cccgtatccg gagagaacca tgtcggatgc ccctgatccc ccggccgagc ggagcgcgac
     1741 cgaatccgtg gcctcgttcg aacagcattc gcgcggcccg ctggagagtt tgcagcattt
     1801 cctgcaccgc tacccgacca tggtgccggt catcgtgctg gtgctgtccc tgatcgcctt
     1861 cggtctgatc gcgcccaatt tcttttccgc cttcaacctg tcgctgatca tgcagcaggt
     1921 ggcggtcgtg ggcacgctgg ccgccgcgca atcgctggtc atcctgaccg cgggcatcga
     1981 cctgtcggtt ggcgccgtca tggtgatgat ttcggtcgtc atggggcggc tgtcgctgga
     2041 tctgggcata cccgtgccga tctcgatcct gctggggctg ggctgcggcc ttctgaccgg
     2101 cgggctgaac ggccttctgg tcacccgcct gaagctgcct cccttcatca ccacgctggg
     2161 cacctggaat atcttcctgg cgttgaatta ttatctgtcc ggacgcgaga cgatccgcag
     2221 ccagacgctg gacgccgagg cgccgctgct gaagctgttc ggcgcgcggt tcaatctggg
     2281 cggcgccgtg ctgacctggg gcgtggttct gatgctgatc gtcttcgcgg tcctgtggta
     2341 tgcgctgaac aagaccgcct ggggcaggcg cgtctatgcc gtcggcgacg atcccgaggc
     2401 cgccgccctt gcgggtatcc agaccagacg cgtgctgatg tcggtctaca tgacggccgg
     2461 gttcatctgc gcgctggccg cgtggtcttc gatcgggcgg gtcggttcgg tcagtccgac
     2521 ctcgttcttc gaatcgaacc tcgaatcgat caccgccgtg gtcatcggcg ggatctcgtt
     2581 gttcggcggg cgcggctcga tcctggggcc gctgatcggc gcgctgatcg tcggcgtgtt
     2641 caattcgggg ctgcgccttg ccggcgtgga cgttctttgg caactcttcg cgaccggctg
     2701 gctgatcatc gtcgccgtcg ccgtggacca gtggatcagg aagatctcgt catgaccgaa
     2761 ccacttctga cagcccgcaa catcgtcaag cgctatggcc gcgtgaccgc gatcgaccat
     2821 gccgatttcg atctctttcc cggcgagatc ctggccgtga tcggcgataa cggcgccggc
     2881 aagtccagcc tgatcaaggc ggtatcgggc gcggtccagc ccgatgaggg cgagatccgg
     2941 ctggacggcc gtccggtcag cttcgacagt cccctgcagg cgcgcaaggc cgggatcgag
     3001 accgtctatc agacgctggc cctgtcgccc gccctgtcca tcgccgacaa tatattcatg
     3061 ggccgcgaga tccgcaagga aggtgtcatg ggccggtggt tcaggatgct ggacaaggcg
     3121 gcgatggaca agttcgcgcg tgacaagctg tcggaactgg ggctgatgac gatccagaac
     3181 atcggccagc cggtcgagac gctgtcgggc ggacagcgcc agggcgtcgc ggtggcccgc
     3241 gctgcagcct tcggcagccg cgtcatcatc ctggacgagc cgacggccgc gcttggggtc
     3301 aaggaaagcc ggcgcgtgct ggatctgatc ctggacgttc gctcgcgcgg gattcccatc
     3361 gtgctgatca gccacaacat gccccatgtc ttcgaagtcg ccgaccggat ccacattcac
     3421 cggctgggca agcggctgtg cgtgatcgat cccaaggatc attccatgtc ggatgccgtg
     3481 gcctacatga ccggcgcgaa gattcccgac gaggccgcgg catgagcgat cgggcagggg
     3541 ggg
//
LOCUS       DTVW01000374            1148 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1461889, whole
            genome shotgun sequence.
ACCESSION   DTVW01000374 DTVW01000000
VERSION     DTVW01000374.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1148)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1148)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1148
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1461889"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1025)
                     /locus_tag="EYO87_04995"
     CDS             complement(<1..1025)
                     /locus_tag="EYO87_04995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014630890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation-transporting P-type ATPase"
                     /protein_id="HIC65348.1"
                     /translation="MDCPTEERMIRTKLGSADGVVALDFNLLERHLTIHHTVDDVTPF
                     LEALRAIGMDGEVLEQRERLTAASAEPTRISRRTWLLGIGGVTAFGAEAIAWSLGDHA
                     WPVLALALVSIALAGGPTLRKGWIAVRALTFNINFLMAVAVIGALLIGKWAEAAMVIF
                     LFAVAEAIEARALVRARDAVRALTAIAPDTAELADGAGGWRDVAVDSVVVGARLRVRT
                     GSRVPVDARIVSGRAALDESPVTGESLPVEKAVGDTILAGTIVTDGVVEAQATAVAAD
                     STLARIAGAIQQAQSQRAPPQRFVDKFSSIYTPAMMLLALAVAVIGPLVTADGWLAWT
                     YRALVLLV"
BASE COUNT          203 a          401 c          375 g          169 t
ORIGIN      
        1 accagcagca ccagcgcgcg atacgtccac gccagccaac cgtcggccgt gacgagcggg
       61 ccgatgacgg caaccgccaa cgccagcaac atcatcgcgg gcgtgtagat ggaagagaac
      121 ttgtcgacaa agcgctgcgg gggcgcccgc tgcgattgcg cttgctggat ggccccggca
      181 atacgcgcca gtgtgctgtc cgcagccacc gccgtggctt gcgcctcgac cacgccgtcg
      241 gtgacgatcg tgccggccag gatggtgtcg ccaacggcct tctccaccgg caggctttcg
      301 cctgtcacgg gcgattcgtc cagcgccgcg cgaccgctca caatgcgcgc atcgaccggc
      361 acgcggctgc cggtgcgcac acgcaggcgc gccccaacga caacgctgtc gaccgccaca
      421 tcgcgccagc cgcccgcgcc atcggccaac tctgctgtgt ccggtgcgat ggccgtcagg
      481 gcgcgcacgg catcgcgggc ccgcaccagc gcgcgtgctt cgatcgcttc tgccacagca
      541 aacaggaaga tcaccatggc cgcttcggcc cacttgccga tcagcagcgc gccgatgacg
      601 gccaccgcca tcaggaagtt gatgttgaac gtgagcgcgc gcacggcaat ccagcccttg
      661 cgcagcgtgg gaccgcctgc caatgcgatg gaaaccagcg ccaacgccaa caccggccag
      721 gcgtgatcgc ccagcgacca ggcgatggct tccgcaccga aggcagttac gccgccgata
      781 ccgagcagcc acgtgcggcg cgagatgcgg gtgggctccg cagacgctgc ggtcaggcgc
      841 tcgcgctgtt caagcacctc gccatccatg ccgatggccc gcagcgcctc caggaagggc
      901 gtcacatcgt caacagtgtg gtggatggtg agatgccgct cgagcaaatt gaaatcgagc
      961 gcgacgacgc catccgcgct gcccagcttg gtgcggatca tgcgctcttc ggtcgggcaa
     1021 tccatttgct cgatgcgtac gacggtgcgg ccggtggcgg ctgcgcgagc ttgggcatcg
     1081 aagggggccg cggctaccgg cgcgtggcca tgatcatgat catgatcatg accgtggtga
     1141 tcgtgatc
//
LOCUS       DTVW01000375            1419 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1462396, whole
            genome shotgun sequence.
ACCESSION   DTVW01000375 DTVW01000000
VERSION     DTVW01000375.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1419)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1419)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1419
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1462396"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            352..531
                     /locus_tag="EYO87_05000"
     CDS             352..531
                     /locus_tag="EYO87_05000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65349.1"
                     /translation="MNTILVCASEPPDPDDALALRRDEQFKCEAEVIVRIATTGSWAS
                     TLSVASGIPATTSKA"
     gene            577..>1419
                     /locus_tag="EYO87_05005"
     CDS             577..>1419
                     /locus_tag="EYO87_05005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65350.1"
                     /translation="MLALVPGDILQNQGANPVLVSSAIPPSQNEAVELQPFERIVVQA
                     AVEVRLATAGNFLGRVNVISGLPIGNGASSANVDVVARQAAAIAAGKADTTQEKTLAS
                     ASVVSGRLILTRVDGTTIEVDLPAGGAALAAPAVIAAPTIAGGTTEGSILTRTAGDAS
                     GNPAPARETVWLLDGVAIAGQTGNTLDTTGRVGVITTQDIWTNSEGTATGTSDAVTTT
                     LAQPDPIVIAARAYPTDFGTLDYNIFDQIPGAAKATGWTVNGSNAITIADGVLSFNSD
                     AIQPG"
BASE COUNT          281 a          453 c          444 g          241 t
ORIGIN      
        1 actaaacatc tgatatatat aaacttattt ggtcttgtcg ttttcgtccg tccgacgatc
       61 cgacggcgtc cgatgtcgga cggggcgaag tgttttctct ggcgcaatgt ctgctgctgt
      121 ggctatttag ggccaatggg caacccctcc ggggtccgga tgacagcggg aaagactgcc
      181 gggcaggccc ccgacaaaag ccagggcggg tccggatgcc gggcaacccc tccgaaaact
      241 cacggaacat cgtcagtttt agggggcccg tccgtggctg attatcaagc atcttctgtc
      301 tggtccgacg ccatcacgct gacagcgggc gatatcgtgc ggaaccgggg attgaacacg
      361 atcctggtct gtgcgtcgga accgcccgat cccgatgacg cactggccct gcgccgggac
      421 gaacagttca agtgcgaagc agaggtcatc gttcgcatcg cgacaacagg gagctgggcc
      481 agcacgctgt ctgtcgcatc aggcatccct gccacaacat caaaagcata ggagcagtgc
      541 atgccatcag tatctatcgg aaaggcatgg tcgcccatgc tggcccttgt gccgggagat
      601 atcctgcaaa accagggcgc caacccggtg ttggtcagtt cggccatacc gccatcgcag
      661 aatgaggcag tcgagctgca gccgtttgaa cggatcgtgg tccaggccgc cgtcgaggtg
      721 cggctggcaa cggcgggaaa tttcctcggg cgcgtgaatg tcatttccgg cctgcccatc
      781 ggcaatggag cgtcatccgc caatgtcgat gtcgtcgcaa ggcaagctgc cgctatcgcg
      841 gccggaaagg ccgatacgac gcaggaaaaa acactggcat cggcaagcgt ggtcagtggg
      901 cgcctgatcc tgacgcgggt cgatggcacg acaatcgagg tcgatcttcc tgccggcggc
      961 gcggccctcg ccgcccctgc ggtcatcgcc gccccgacga tcgccggtgg cacgaccgag
     1021 ggcagcatcc tcacgcggac ggcgggcgat gccagcggca acccggcgcc cgcgcgcgaa
     1081 accgtctggc tgctggacgg cgtggccatc gccgggcaga ccggcaacac gctggacacg
     1141 accggccgcg tcggcgtgat cacgacgcag gatatctgga ccaacagcga gggcacggca
     1201 acgggcacct cggacgccgt gaccaccacc cttgcccagc ccgatcccat cgtgatcgcc
     1261 gctcgcgcct atccgacgga tttcgggacg ctggattaca atatcttcga ccagatcccc
     1321 ggagcggcca aggcaaccgg atggacggtc aatggttcca acgccatcac catcgcggac
     1381 ggcgttctct cgttcaacag cgacgcgatc cagccgggc
//
LOCUS       DTVW01000376            2212 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1467509, whole
            genome shotgun sequence.
ACCESSION   DTVW01000376 DTVW01000000
VERSION     DTVW01000376.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2212)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2212)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2212
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1467509"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..696)
                     /locus_tag="EYO87_05010"
     CDS             complement(<1..696)
                     /locus_tag="EYO87_05010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008554331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor Rho"
                     /protein_id="HIC65351.1"
                     /translation="MSDERLNLSELKAKSPADLLSMAEEWEIENASTMRKGEMMFSIL
                     KEHAEEGWDIGGEGVLEVVQDGFGFLRSTEANYLPGPDDIYVSPDMIRQHSLRTGDSV
                     EGVIRAPGENERYFALTRVERINFEDPEKARHKVAFDNLTPLYPDERMTMEIEDPTIR
                     DRSARIIDLVAPIGKGQRSLIVAPPRTGKTVLLQNIAHSIERNHPECYLIVLLIDERP
                     EEVTDMQRSVRGEV"
     gene            complement(822..1268)
                     /locus_tag="EYO87_05015"
     CDS             complement(822..1268)
                     /locus_tag="EYO87_05015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CopD family protein"
                     /protein_id="HIC65352.1"
                     /translation="MTDLMIAIYPYVKAFHVIAVISWMAGLFYLPRLFVYHAERGAEA
                     AEPTDSFRIMEEKLLRVIMRPAMIATWASGLWLVATPGILDWTALWPWFKATGVLGMT
                     GFHIWCAAERRRIAAGAIRRGRSYRLMNEVPTVLLIGIVVSVIVKF"
     gene            1749..>2212
                     /locus_tag="EYO87_05020"
     CDS             1749..>2212
                     /locus_tag="EYO87_05020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009816777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HIC65353.1"
                     /translation="MQDDPARPAAQIPLAGVIGMPIAHSRSPRLHGFWLQRYGIAGHY
                     MPLPVRAEHLADVLRVLPRAGFVGVNVTIPHKEAVLALADAVSDRAALIGAANTLIFR
                     PDGKIHADNTDGYGFIANLRQNAPDWRPDAGPAAVIGAGGAARAVVASLLDSG"
BASE COUNT          401 a          728 c          646 g          437 t
ORIGIN      
        1 cacctcgccc ctcacgctgc gctgcatgtc ggtgacctct tcgggccgct cgtcgatcag
       61 caaaacgatc agatagcatt ccgggtgatt gcgctcgatc gaatgggcga tgttctgcag
      121 cagcacggtc ttgccggtcc gcggaggcgc gacgatcagc gaccgctgcc ccttcccgat
      181 cggcgccacc aggtcgatga tccgcgcgct gcgatccctg atcgtgggat cctcgatctc
      241 catcgtcatc cgttcatcgg gatagagcgg ggtcaggttg tcgaaggcga ccttgtggcg
      301 ggctttctcg ggatcctcga agttgatcct ctcgaccctg gtcagcgcga aataccgctc
      361 gttctcgccc ggggcccgaa tgacgccctc gacgctgtcg ccggtccgca gggaatgctg
      421 ccggatcatg tcggggctga cataaatgtc gtcaggcccg ggcaggtaat tggcttcggt
      481 cgaacgcaga aagccgaaac cgtcctgcac gacctccaac accccctcgc cgccgatatc
      541 ccaaccttct tcggcatgtt ccttgaggat cgagaacatc atctcgccct tgcgcatggt
      601 cgaggcgttc tcgatttccc attcctcggc catggacagc aagtcggccg ggcttttcgc
      661 cttgagttcg gacaggttca ggcgctcatc gctcatatcg tcaccgtagg ccgcccccgc
      721 gtcgaaggtc ggtcatgtca tattcgtgtg ggaatccccg taccggacgg ccgggcttgg
      781 tcgcgacata ggccggcaga accggcgagt caatcgccca cctagaattt gacgatgacc
      841 gacacgacaa tgccgatgag cagcactgtg ggcacctcgt tcatcagccg ataagaccga
      901 ccgcgacgga tcgctccggc cgcaatccgc cgccgctcgg ccgcgcacca gatgtgaaat
      961 ccggtcattc ccagcacccc ggtggccttg aaccagggcc acagggccgt ccaatcgagg
     1021 atacccggcg ttgccaccag ccataatccg ctggcccagg tcgcgatcat cgccggccgc
     1081 atgatcacgc gcagcagctt ctcctccatg atgcggaagc tgtctgtcgg ctccgctgcc
     1141 tcggcgccgc gctcggcgtg atagacgaac agacgcggca ggtagaacag cccagccatc
     1201 cacgagatca ccgcgatcac atggaaggct ttcacatagg gatagatcgc aatcatcagg
     1261 tcggtcatcg ggtcctcgtt tccgaccact taaataaaaa gatatgaaaa aggaatgtag
     1321 ttgaagtagg gcctgtggat tgcgggactg ggcgtcgctc cccgcaccta tccaccattt
     1381 gcgcgcctgt ggataagtcc gggaaaactt ctttgaaagt gataatatct tttgttttca
     1441 tgaatttgat atctggacaa cttcgggacg acacggttgt tgtcgggggt gtccacaacc
     1501 cgtatcgcgg cgccgcgggt cttgtccact tgtggattgc cagccttcgt tccggttatg
     1561 tcccgggcgg aattcgtgtc cttgcagcca tcctcaggcg taccaacatg ccccggaccg
     1621 attcccccac gattccgtcc acaaaagccg ggtcttcgct gcaacaatgg cgcgttgcgg
     1681 ccgcgttcgg actttttcca tcgtcgccaa aggattactc tgcccaaaac gatcaatgga
     1741 caaagcagat gcaagacgat cccgccagac cggccgcaca gatcccgctt gccggcgtca
     1801 tcgggatgcc gatcgcccat tcgcgttcgc cccgcctgca cggattctgg ctgcaacgct
     1861 acggcatcgc gggccattac atgccgctgc ccgttcgggc cgagcatctg gccgacgtgc
     1921 tgcgcgtcct gccgcgggcg ggctttgtcg gggtgaacgt gacgattccc cacaaggagg
     1981 cggtgctggc ccttgccgac gcggtttcgg accgcgcggc cctgatcggg gccgccaaca
     2041 cgctgatctt ccgccccgac ggcaagatcc atgccgacaa caccgatggt tatggcttca
     2101 tcgccaatct gcgccagaac gcgcccgact ggcggcccga tgccggcccc gcggcggtta
     2161 tcggcgccgg cggcgcggcg cgggcggtcg tcgcctcgct tctggacagc gg
//
LOCUS       DTVW01000377            1473 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1469669, whole
            genome shotgun sequence.
ACCESSION   DTVW01000377 DTVW01000000
VERSION     DTVW01000377.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1473)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1473)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1473
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1469669"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..208)
                     /locus_tag="EYO87_05025"
     CDS             complement(<1..208)
                     /locus_tag="EYO87_05025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012179205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65354.1"
                     /translation="MNTAVAHDYSGAPLGAPVYELTKVSKTYARNRVIALEDVSLTLR
                     KGSFTSIIGSSSWAGLAGMVGSGML"
     gene            complement(205..1233)
                     /locus_tag="EYO87_05030"
     CDS             complement(205..1233)
                     /locus_tag="EYO87_05030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005796800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HIC65355.1"
                     /translation="MINRRAFTASLLAAVPATGFLGKSVLAQTMRDITFVQPSPSAIN
                     SFPVFVAIGEGYFAQEGLNVNVEAINGSGAVLQALSAGQAQFGRPGPGPLLAARSRGV
                     DAVHIYNVAARSNFGIAVQDDSDFQSIDQLRGKVIGTGTADGAEVGFARNVMSGAGMT
                     EGQDYDFLTVGDGGPATAAFLNGEIDAYSSSTADTAILNQRGMAVRDITPEEFGRFFG
                     NGIATMADTIANDRALVEAWSRAFAKGHAFALDDANRDKVLGHLADGNPQEGEDKEFQ
                     SALFDAVRSKTIPPEGSPHLGWYPAEVWAEWQESLIAGGELSSPLDDLDAAWTNEFAK
                     LGSEAAGG"
     gene            complement(1293..>1473)
                     /locus_tag="EYO87_05035"
     CDS             complement(1293..>1473)
                     /locus_tag="EYO87_05035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009519121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hydrolase"
                     /protein_id="HIC65356.1"
                     /translation="TLIASLSEGMTLEPGDIIATGTPSGVGYAMEPPRFLKDGDTVEC
                     RISGIGTLCNTVRAV"
BASE COUNT          251 a          475 c          473 g          274 t
ORIGIN      
        1 caagcatgcc gctgcctacc atgcccgcca agcctgccca actgctggac ccgatgatcg
       61 aggtaaagct gcccttgcgc agggtgagac tgacgtcttc aagcgcgatc acacggttgc
      121 gcgcataggt cttgctgacc tttgtcaact cgtagaccgg cgcgccaaga ggcgcgccgg
      181 aatagtcgtg tgcaacggct gtgttcatcc gcccgcggcc tcgcttccaa gcttcgcgaa
      241 ctcgttcgtc caggcggcgt ccagatcatc aagcgggctg gacagctcgc cgcccgcgat
      301 cagcgattcc tgccattcgg cccagacctc ggccggatac cagccaagat gcgggctgcc
      361 ctcggggggg atcgtcttgg agcggaccgc gtcgaaaagc gcggactgga attccttgtc
      421 ctcgccttcc tgcggattgc cgtccgccag atgaccgaga accttgtcgc ggttcgcatc
      481 gtcgagggcg aaggcatgtc ccttggcaaa ggcgcggctc caggcttcga ccagcgcgcg
      541 gtcgttggcg atagtatcgg ccatggttgc gatgccgttc ccgaagaagc ggccgaactc
      601 ctcgggggtg atatcccgca cggccatgcc acgctgattg aggatggcgg tatcggcggt
      661 cgatgaagaa taggcgtcga tttcgccgtt caggaaggcc gctgtcgccg gaccaccgtc
      721 gccgacggtg aggaagtcgt agtcctgacc ctcggtcatg cctgcaccgg acatgacgtt
      781 gcgggcaaac ccgacctcgg cgccgtcggc cgtgccggtg ccgatcacct tgccgcgcag
      841 ctggtcgatg ctctggaagt cggaatcgtc ctgcaccgcg atgccgaagt tgctgcgtgc
      901 ggcgacgttg tagatgtgca ccgcgtccac accacgggac cgcgccgcca gcagcggacc
      961 gggaccgggg cgtccgaact gcgcctgacc tgcggaaagc gcctgcagca cggcgccgga
     1021 cccgttgatc gcttccacgt tgacgttcaa accctcttgc gcgaagtacc cttcgccgat
     1081 ggcgacgaac acgggaaaag agttgatggc ggacgggctg ggctgaacga aggtgatgtc
     1141 gcgcatggtc tgtgccagca ccgatttgcc cagaaagccc gtggccggaa cggcggccag
     1201 cagtgaggcg gtaaacgctc ttctgttgat catggtcatt ttcctcccgt ttatggttct
     1261 gcctttcgcc gcctcctctg cggcggcggg cgctatacgg cgcgcacggt gttgcaaagc
     1321 gtgccgattc ccgaaatcct gcattcgacc gtgtcgccgt ccttgaggaa ccgcggcggc
     1381 tccatggcat agccgacgcc ggatggcgtg ccggtggcaa taatgtcgcc gggctccagc
     1441 gtcattcctt ccgacagcga cgcaatcagc gtc
//
LOCUS       DTVW01000378            1046 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1471583, whole
            genome shotgun sequence.
ACCESSION   DTVW01000378 DTVW01000000
VERSION     DTVW01000378.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1046)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1046)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1046
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1471583"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..238)
                     /gene="prfC"
                     /locus_tag="EYO87_05040"
     CDS             complement(<1..238)
                     /gene="prfC"
                     /locus_tag="EYO87_05040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008235360.1"
                     /note="stimulates the release of release factors 1 and 2
                     from the ribosome after hydrolysis of the ester bond in
                     peptidyl-tRNA has occurred; GDP/GTP-binding protein;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 3"
                     /protein_id="HIC65357.1"
                     /translation="MQNRPDLPADIARRRTFAIISHPDAGKTTLTEKFLLYGGAIQMA
                     GQVRAKGEARRTRSDFMKMEQDRGISVSASAMSFD"
     gene            883..1046
                     /locus_tag="EYO87_05045"
                     /pseudo
     CDS             883..1046
                     /locus_tag="EYO87_05045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012633476.1"
                     /note="catalyzes the formation of
                     4-amino-2-methyl-5-phosphomethylpyrimidine from
                     5-amino-1-(5-phospho-D-ribosyl)imidazole and
                     S-adenosyl-L-methionine in thiamine biosynthesis;
                     incomplete; partial in the middle of a contig; missing
                     N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine biosynthesis protein ThiC"
BASE COUNT          208 a          300 c          332 g          206 t
ORIGIN      
        1 agtcgaagga catcgccgag gccgacacag aaatgccgcg atcctgttcc atcttcatga
       61 aatccgatcg cgtccggcgc gcctcgccct tggcgcggac ctgtccggcc atctggatcg
      121 cgccgccata gagcaggaac ttctcggtca gcgtagtctt gcctgcatcc ggatgcgaaa
      181 tgatcgcgaa ggtccggcgg cgggcgatgt cggcgggaag atcggggcgg ttctgcatgg
      241 cgcgcatcta gcgcgacaga ggggaaagcg caatcgcgca tcagggccgc acaggacggc
      301 cgaaccattg cagaacatgc agggaaactg cgcaataata gatgaatgca aatcgtgatc
      361 gcgacaattt ggcttaagta ttgacagtat gttaatcaga ttaccaatat caaaaggttg
      421 tttctggatc gctctttctt gcatataaat gccgaaaatg atcctggcgc gttcgcgcgc
      481 atttccggcc ggtacatggt gatggttaac gatctcagga aagtgtatca catgacgctc
      541 gacacttctt acgatcagat gatgcatatc ctctcggcac gagggctgga atgggtccgg
      601 cgccatgtcg acgcgctgcc cgatcccctg ccggccggac atgacgccgt ggcgccgttg
      661 tcccaggccg cgcgcctcgc gccggtctgt tccgggttgc gcggcagtgt ctcgccactg
      721 gagatattcg tgcgacggcg tctggatgat cggctggttg cggaggtctg cgatctgata
      781 cggcgcaagg gggccgagcc cgaaatctgt gacacgctgg cggcggcgca ggggctgggg
      841 cttggcggcg gcgcgcttta tcgcgcgatc agggatttct gcgaccgcga cgacgagctg
      901 agtcgcgccc gattcaagtt cgactggcgg cgccagttcg aactcagcct ggaccccgac
      961 acagcgcagc gaatgcacga cgaaaccctc cccgaggagt acttcaagtc cgcggagttc
     1021 tgctccatgt gcgggccgaa attctg
//
LOCUS       DTVW01000379            1144 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1471822, whole
            genome shotgun sequence.
ACCESSION   DTVW01000379 DTVW01000000
VERSION     DTVW01000379.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1144)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1144)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1144
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1471822"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..812)
                     /locus_tag="EYO87_05050"
     CDS             complement(<1..812)
                     /locus_tag="EYO87_05050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003499265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HIC65358.1"
                     /translation="MTISQTISADTGTRLVRIGVIGTGMIGTDHTRRIQEVLTGAEVV
                     GLYDYAPANAEKLKGAHAPNAQIFDSGEALIASDDIDAVLVCSTGSTHEQYVLAAIAA
                     GKPVFCEKPLATTAEAAKGIVDAEVKGGKRLVQVGFMRRFDQGYNMLKRTMEEGLGEP
                     LMIHSCHRNPAVPEQYVTPMAIHDTFIHEIDTFRWLLDDDFVSAQVIFPRKTKHAHAK
                     VADPQIVLLETSKGVRIDCEIFVNCRYGYDIQCQIVAEEGVANLPEPMAIATR"
     gene            complement(823..>1144)
                     /locus_tag="EYO87_05055"
     CDS             complement(823..>1144)
                     /locus_tag="EYO87_05055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010395421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="sugar phosphate isomerase/epimerase"
                     /protein_id="HIC65359.1"
                     /translation="FGDDTVAMLRECADVLAHVHIADTFNHKASSGLRYIINPPGSSA
                     RVHQHLNIGQGEVPWDDFYKTLAEIGFDGIMTACVFAWEEKADESGKFMRAEMQRLID
                     KHFN"
BASE COUNT          194 a          348 c          373 g          229 t
ORIGIN      
        1 cgtgtggcga tggccatcgg ctcgggcagg ttcgcgaccc cctcctcggc gacgatctgg
       61 cactggatgt catatccgta gcggcagttg acgaagatct cgcagtcgat ccgcacccct
      121 ttcgaggtct cgagcagcac gatctgcggg tccgcgacct tggcatgggc gtgctttgtc
      181 ttgcgcggaa agatgacctg cgccgagacg aaatcgtcgt ccagaagcca gcggaacgtg
      241 tcgatctcgt ggatgaaggt gtcgtggatc gccatcggcg tcacgtattg ctcgggcacg
      301 gccgggttgc ggtggcagga atggatcatg agcggctcgc ccagcccttc ctccatcgtg
      361 cgcttgagca tgttgtaacc ctggtcgaag cgacgcatga agccgacctg aaccaggcgc
      421 ttgccgccct tcacctcggc gtcgacgatg cctttcgcgg cctcggcggt cgtggccagc
      481 ggcttctcgc agaacaccgg cttgccggcc gcgatcgccg ccagaacata ttgctcgtgc
      541 gtggaaccgg tcgagcagac aagcacggcg tcgatgtcgt ccgacgcgat cagcgcctcg
      601 ccactatcga agatttgcgc gttcggcgcg tgcgcgccct tgagcttttc ggcgttagca
      661 ggcgcgtagt cgtacagacc cacgacctcg gcgccggtca ggacctcctg gatgcggcgg
      721 gtatggtcgg tgccgatcat gccggtgccg atgacaccga tgcggacaag ccgggtgccg
      781 gtgtcggccg agatggtctg agaaatggtc attccgtgat cctcagttga aatgcttgtc
      841 gatgaggcgc tgcatctctg cgcgcatgaa cttgccgctc tcgtcggcct tctcttccca
      901 ggcgaagacg caggcggtca tgatcccgtc gaaaccgatt tcggcgagag tcttgtagaa
      961 atcgtcccac ggcacctcgc cctgaccgat gttcaggtgc tggtgaacgc gcgcagacga
     1021 gccgggcgga ttgatgatgt agcgaaggcc cgagctggcc ttgtgattga acgtgtccgc
     1081 gatgtggaca tgtgcgagca cgtcggcgca ttcacgcagc atcgccacgg tgtcgtcgcc
     1141 gaaa
//
LOCUS       DTVW01000380            1205 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1472214, whole
            genome shotgun sequence.
ACCESSION   DTVW01000380 DTVW01000000
VERSION     DTVW01000380.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1205)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1205)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1205
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1472214"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(199..1038)
                     /locus_tag="EYO87_05060"
     CDS             complement(199..1038)
                     /locus_tag="EYO87_05060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010400504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HIC65360.1"
                     /translation="MDANPTYHGIELDAETALALLEWQAEMGVDEPILDAPLDRFDLA
                     ARPKPATAKPPLPPPLQARAPGSSPPQSTDDAAARLAEAEALAAGAGTLAALAAAQEA
                     FDGIELKKGARNFCFADGDPGARVMILGEAPGDEEDRQGRPFVGRAGQLLDRMFAAIG
                     LSRTAVDAAQALYVVNVLTWRPPGNRDPSPDEILVSMPFVRRHVELAAPDLIVLMGNI
                     PCQAALGRRGILRLRGQWVEAFGRPALPMTHPAYLLRNPAAKREAWADLLSLSATLEG
                     LSV"
     gene            complement(1077..>1205)
                     /locus_tag="EYO87_05065"
     CDS             complement(1077..>1205)
                     /locus_tag="EYO87_05065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010393518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix family transcriptional regulator"
                     /protein_id="HIC65361.1"
                     /translation="AENSERAIDVQITRLRRKIEPDPKEPRFLQTVRGTGYMLVCD"
BASE COUNT          205 a          424 c          411 g          165 t
ORIGIN      
        1 cgccgccgcc gccgcgcccc ggtccaccgt cctcgccgcg cgaggcgacc gcctgccaca
       61 actgaaagcc cgccagaaac agcagggcca aggtcagaaa ggtgatgaac agccccgaaa
      121 gactgcggaa gagaaagcgc atccggcggg gatcccgtct gtgaagggtc gtcctaaccc
      181 atgatgcgga aatgaaacct aaacggaaag gccttccagc gtcgcggaca gcgacagaag
      241 atccgcccat gcctcgcgct tggcggccgg gttgcgcagc agataggccg gatgggtcat
      301 cggcagcgcg gggcggccga aagcctcaac ccattgccca cgcaggcgca gaatgccccg
      361 gcggcccagg gcggcctggc agggaatgtt gcccatcagc acgatcagat cgggcgcggc
      421 cagttcgaca tgacgccgca cgaaaggcat gctcacgagg atttcatcgg ggctggggtc
      481 gcggttgccc ggcggacgcc aggtcagcac gttgacgaca tacagcgcct gcgccgcatc
      541 gaccgccgtc cgggacagcc cgatggcggc gaacatccgg tccagcaact gccccgcgcg
      601 accgacgaag gggcgaccct gacggtcctc ctcgtcgccc ggcgcctcgc ccagaatcat
      661 cacgcgggcc ccgggatcgc cgtcggcgaa gcagaaattc cgagcgccct tcttcaattc
      721 gatcccgtcg aaagcctcct gcgccgccgc aagcgccgcc agcgtcccgg cccctgccgc
      781 cagcgcctcg gcctcggcca gacgggcggc ggcgtcatcg gtcgattgcg gaggcgacga
      841 tcccggcgcc cgggcctgca gcggcggcgg cagcggtggc ttggccgtgg ccggtttcgg
      901 gcgcgcggcc aggtcgaacc ggtccagggg cgcgtccagg atcggctcgt ccacgcccat
      961 ctcggcctgc cattccagca gcgccagcgc ggtttcggca tccagctcga ttccgtgata
     1021 tgtcgggttc gcgtccatcc gcgcgcaggc taggccgcgc gcgcgggcgg gacaagtcag
     1081 tcgcagacca gcatgtagcc ggtgccgcgc acagtttgca gaaagcgcgg ctctttcgga
     1141 tcgggctcga tcttgcggcg caggcgggtg atctggacat cgatggcgcg ttcgctgttc
     1201 tcggc
//
LOCUS       DTVW01000381            1428 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1473649, whole
            genome shotgun sequence.
ACCESSION   DTVW01000381 DTVW01000000
VERSION     DTVW01000381.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1428)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1428)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1428
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1473649"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..221)
                     /locus_tag="EYO87_05070"
     CDS             complement(<1..221)
                     /locus_tag="EYO87_05070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007427861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein DctP"
                     /protein_id="HIC65362.1"
                     /translation="MKNLSILALGLGWVAFAAQAETTIRIGHAAPESSPIHQALLQFE
                     ESLERASDGAIQVELFPGGQIGTVQEMTEL"
     gene            563..994
                     /locus_tag="EYO87_05075"
     CDS             563..994
                     /locus_tag="EYO87_05075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007427934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHRD domain-containing protein"
                     /protein_id="HIC65363.1"
                     /translation="MFVPDIQRVAFAVAAGAIMLAGPAFAETVKYTADLTADAEVPPT
                     DSSATGTADVTVDTDAKTVSWTVTVEGLSGDPVAAHIHGPAEKSENAAPVVDMSGSLM
                     EGSADITDEQISELEAGKYYVNVHTEQNPDGEIRGQLEAAM"
     gene            complement(1124..>1428)
                     /locus_tag="EYO87_05080"
     CDS             complement(1124..>1428)
                     /locus_tag="EYO87_05080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010397763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65364.1"
                     /translation="LFVSTCFEDLNQLFLEGFGLHRRPLHENRPAFIVTADVDPLRDD
                     GSAYAERLRAAAGEVILRNERQLPHGYLRARRDSDRARRSFQAIIAAIAGFAARPS"
BASE COUNT          287 a          417 c          468 g          256 t
ORIGIN      
        1 agctcggtca tctcctgaac ggtgccgatc tggccgcccg ggaacagttc gacctgaatg
       61 gcgccgtctg acgcgcgctc gagggattct tcgaattgca gcagcgcctg atggatcggc
      121 gagctttccg gcgccgcgtg gccgatacgg atcgtggttt cggcctgcgc cgcgaaagcg
      181 acccatccca gaccaagcgc gagtatggaa agatttttca tggtcgatct tcccagttgc
      241 agcaaatctt ggcgagcgcg atgggctttc caccatcagc atgaatacga agtcatcgca
      301 caatatgcca attatcatgc gcgctcaaga aaaatgttgc atacgaattc taaccgcaga
      361 ggcattggcg cttctgaccc cggatggcgc ctctccggac gcttcggcct tcgatcaggg
      421 cgggggtctg cagcgatcag ggtggctgcc cgggcggcct cgcgcggttt tgcgccgtcc
      481 tcgaaaaatc gggatcatct cgggaaactt cggacaggcc ggttcgttgt ctctgtccac
      541 ccaccaacga ggagtatcag aaatgttcgt tcccgatatc cagcgggtcg cctttgccgt
      601 cgccgccggc gcgatcatgc ttgcgggtcc cgccttcgcc gaaacggtga aatataccgc
      661 cgacctgacc gccgatgccg aggtgccgcc gaccgacagt tccgcgaccg gcactgcgga
      721 cgtgaccgtc gataccgatg ccaagacggt ctcgtggacc gtcaccgttg agggcctgag
      781 cggagatccg gtagccgcgc acatccatgg accggccgaa aagtccgaga acgcggcgcc
      841 cgtcgtcgac atgtccggct ctctcatgga gggaagtgcg gacatcaccg acgagcagat
      901 cagcgagctt gaagccggga aatactatgt gaacgtgcat accgagcaaa atcccgacgg
      961 tgaaattcgc gggcagcttg aagcggccat gtgaaaccat gccggaagtc ggtgcagcat
     1021 gctgtcggaa tgacggcatg ctgcaccggg cggcatggcg ggatgtcacc gtgggatgcc
     1081 gcgcggatcg ggaatttccg ggccgagatg tcacccggtc tgatcaggag ggtcgcgccg
     1141 cgaaaccggc aatggcggcg atgatcgcct gaaaactgcg gcgtgcgcga tcgctgtcgc
     1201 ggcgggcgcg gagatagccg tggggcaact ggcgttcatt tctgaggatg acctcgcccg
     1261 ctgcggcgcg gaggcgctcg gcataggccg agccatcgtc gcgcaggggg tccacgtcgg
     1321 cggtgacgat gaaagcggga cgattttcgt gcagcgggcg acggtgaagc ccgaagccct
     1381 cgaggaaaag ttgattgaga tcttcgaaac acgtggaaac aaagagga
//
LOCUS       DTVW01000382            1003 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1475098, whole
            genome shotgun sequence.
ACCESSION   DTVW01000382 DTVW01000000
VERSION     DTVW01000382.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1003)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1003)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1003
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1475098"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1003)
                     /locus_tag="EYO87_05085"
     CDS             complement(<1..>1003)
                     /locus_tag="EYO87_05085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing histidine kinase"
                     /protein_id="HIC65365.1"
                     /translation="HRGQTQVQTAQVDVEQFPRQGAQDEHALALLATDESLTSDLESE
                     LLQNAGVLNVVLRRDNVRQLVLSSPIRDQVSATYDLREEGVVQTIDDALVTLLDDRDE
                     TVRVIGSPVNQAGQLIEITMKTAPLRGAMIDYGLRLLVLSAAFSILTGILLNIAAQRL
                     ILVPIRRVISHMTSYALEPDNTRHIITPNARLAELRDAETALEAMQKTVTSSLKQKER
                     MAQLGEAVAKISHDLRNILTTAQIFADRLEDSADPKVRRAAPKLVNSISRAVNLCETT
                     LAFGKAEEPAPSLSRFNLTQLAAEVIEAETLAGEAAGQVEFVTDIAPSLTIRADRDQL
                     "
BASE COUNT          164 a          325 c          326 g          188 t
ORIGIN      
        1 aaagctgatc gcggtcggcg cggatcgtca ggctgggcgc gatgtcggtg acgaattcga
       61 cctgccccgc ggcttcgccc gccagcgtct cggcctcgat cacctcggcg gcaagctggg
      121 tcaggttgaa acgcgacagg gacggcgcag gctcttccgc cttgccgaag gccagggtcg
      181 tttcgcacag gttcactgcg cgagagatcg agttcaccag cttgggcgcg gcgcggcgaa
      241 ccttgggatc ggcgctatcc tccagccggt cggcaaagat ctgggccgtc gtcaggatgt
      301 tgcgcagatc gtggctgatc ttggccacag cctcgccaag ctgcgccatc ctctccttct
      361 gcttcagcga cgaggtgacg gtcttctgca tcgcctccag cgccgtttcg gcgtcacgca
      421 attcggccag gcgggcgttg ggggtgatga tgtggcgcgt gttgtcgggt tccagcgcgt
      481 aagaggtcat atggctgatc acgcgccgga tcggcaccag gatcagccgc tgagccgcga
      541 tgttgagcag gatcccggtc agtatcgaaa acgccgccga cagcaccagc aaccgcagcc
      601 cgtaatcgat catcgcgccg cgcagggggg cggtcttcat ggtgatctcg atcagctggc
      661 ccgcctgatt gaccggagag ccgatgacgc gcacggtttc gtccctgtcg tccagcagcg
      721 tgaccagagc atcgtcgatc gtctgcacga cgccttcttc gcgcagatcg taggtcgcgc
      781 tgacctgatc gcggatgggc gaggacagga ccagctggcg cacgttatcg cggcgaagca
      841 caacgttcag cacgccggca ttctgcaaca attccgattc caggtcgctg gtcagcgatt
      901 catcggtcgc cagcagcgcc agcgcatgct cgtcctgcgc cccctgtcgc gggaactgct
      961 ccacatccac ctgcgcggtc tgcacctggg tctgcccgcg atg
//
LOCUS       DTVW01000383            1050 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1475099, whole
            genome shotgun sequence.
ACCESSION   DTVW01000383 DTVW01000000
VERSION     DTVW01000383.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1050)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1050)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1050
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1475099"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..521
                     /locus_tag="EYO87_05090"
     CDS             <1..521
                     /locus_tag="EYO87_05090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010395268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HIC65366.1"
                     /translation="RMRLAGRHLIDLMGMEVRGMPICAFLQSSSRGRLSDVLESVFKA
                     PQIAELTLHSRGEYARPELNARMLLLPLRSDLGDVTRALGCLISDGETGVAPRRFDLV
                     ADRVLPIIEGGTTVAPSPSGFSEPPSRFDGMDTPKRRRGDAKGAPAAPLPDPGRTATP
                     EERRAGFRVVTD"
     gene            589..855
                     /locus_tag="EYO87_05095"
     CDS             589..855
                     /locus_tag="EYO87_05095"
                     /inference="COORDINATES: protein motif:HMM:PF13586.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65367.1"
                     /translation="MRRTDRVLKVDDQAALAVLDRDARRGRDRIERFLSKRKHCRAIA
                     TGFEKHDDNFLALVKRTATRIWFRVHEPVTRACAARLATGPHRP"
     gene            894..>1050
                     /locus_tag="EYO87_05100"
     CDS             894..>1050
                     /locus_tag="EYO87_05100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009818347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65368.1"
                     /translation="MDIEARREADPQHWKLASAIRVLAMDAVEAASSGHPGMPMGMAD
                     IATVLFRK"
BASE COUNT          193 a          344 c          341 g          172 t
ORIGIN      
        1 cgcggatgcg ccttgccggc cgccacctga tcgacctgat gggaatggag gtgcgcggga
       61 tgccgatctg cgccttcctg caatccagtt cccggggacg cctgtcggat gtgctggaat
      121 cggtcttcaa ggcgccgcag atcgccgaac tgacgctgca ttccaggggt gaatatgccc
      181 ggcccgaact gaacgcgagg atgctgctgc tgccgctgag atccgatctc ggcgatgtga
      241 cccgggccct ggggtgcctg atctcggatg gcgagaccgg tgtggcgccg cgccgtttcg
      301 atctggtcgc ggacagggtg ctgccgatca tcgagggggg cacgaccgtc gcgccatcgc
      361 cttcgggctt ttccgagccg ccatcgcgct ttgatggcat ggatacgcca aaacggcggc
      421 ggggcgatgc gaagggcgcc cctgccgcgc ccctgcccga tccaggccgc acagcgacac
      481 ccgaggaacg gcgggccggc tttcgggtcg tgaccgacta gtgcacgcac ccatccatga
      541 cgaacgcggt tttctttctg tgaaagagga aagcagccgg tcccagcgtt gcgacgaact
      601 gacagagttc taaaggtcga cgaccaggcc gctcttgccg tcctcgaccg cgacgcccgc
      661 cgaggacgcg accggatcga acggttcttg tcgaaacgca agcattgccg ggccatcgcg
      721 accggattcg agaaacacga tgacaatttc cttgccctcg tcaaacgcac cgcaacacgc
      781 atctggtttc gcgttcatga gccggtgacc cgggcctgcg ccgcacggct tgcaacagga
      841 ccgcatcgcc cctaacagaa cgggaacaga catttgcccc cggagggaaa gccatggata
      901 tcgaagcccg ccgcgaagcc gacccgcagc actggaaact ggccagcgcg atccgcgtcc
      961 tggcgatgga cgcggtcgag gccgccagtt ccggccaccc cggaatgccg atgggcatgg
     1021 cggatatcgc gacagtgctg tttcgcaagc
//
LOCUS       DTVW01000384            1745 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1475528, whole
            genome shotgun sequence.
ACCESSION   DTVW01000384 DTVW01000000
VERSION     DTVW01000384.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1745)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1745)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1745
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1475528"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..740)
                     /locus_tag="EYO87_05105"
     CDS             complement(<1..740)
                     /locus_tag="EYO87_05105"
                     /EC_number="3.5.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017997745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="guanine deaminase"
                     /protein_id="HIC65369.1"
                     /translation="MQQLIRGRVLDFHADPAETADNHRYLEDGAVLIDDGRILAVDDY
                     AVLARPGIAEIDHRPNLILPGFIDTHIHFPQVQVVASWGTQLLDWLNTYTFPEEARFN
                     QQGHAPAMADAFLNLLTDHGTTTAVAFCSVHPESAEALFTAAHARNMAMIAGKVMMDR
                     NAPPQVLDTPQQGYDDSKALIERWHGKGRQRYAITPRFAITSTPEQMAATGRLVQEFP
                     DCHIQTHLSENLDEIAFTLGLYPDARDYL"
     gene            complement(728..1468)
                     /gene="xdhC"
                     /locus_tag="EYO87_05110"
     CDS             complement(728..1468)
                     /gene="xdhC"
                     /locus_tag="EYO87_05110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017997746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase accessory protein XdhC"
                     /protein_id="HIC65370.1"
                     /translation="MIRVRVIATSGSTPRDAGAEMIVEPHRVTGTIGGGQLEYMAIDR
                     ARQMIARSEESARMEVPLGPEIGQCCGGRVTLCLDREPSALEDHPDALIFGAGHVGRA
                     LALALQPLPVNVTLIDQRAPELAQAAPGIETRMSPLPEALIRAARPGSAVVILTHDHA
                     LDFLLAAEALSRDDLCYVGMIGSATKRARFSGFARKQGLDPAPLVCPIGAGLTRDKRP
                     SVIAATTAAELIARLTATSSLNKYPCNS"
     gene            complement(1465..>1745)
                     /locus_tag="EYO87_05115"
     CDS             complement(1465..>1745)
                     /locus_tag="EYO87_05115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002823474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="xanthine dehydrogenase molybdopterin binding
                     subunit"
                     /protein_id="HIC65371.1"
                     /translation="QLRTHAPSTYKIPLASDRPRVFNVKLADWSENAERTIKRSKAVG
                     EPPFMLGISVFEAINMAVASIGDYREPARLDAPATPERVLMAVNRLRG"
BASE COUNT          277 a          529 c          641 g          298 t
ORIGIN      
        1 aggtagtcgc gggcgtcggg atagaggccc agcgtgaagg cgatctcgtc caggttttcg
       61 gacagatgcg tctggatatg gcaatcggga aattcttgga caagccggcc cgtggccgcc
      121 atctgctcgg gcgtcgaggt gatggcgaag cgcggggtaa tggcgtaacg ctgccgcccc
      181 ttgccgtgcc agcgttcgat cagcgccttg ctgtcgtcat agccctgctg cggggtgtcc
      241 agaacctggg gcggggcgtt gcggtccatc atcaccttgc cggcgatcat ggccatgttc
      301 cgggcatggg cggcggtgaa cagcgcctcg gcgctttcgg gatggaccga gcagaaggcg
      361 acagccgtgg tcgtgccgtg gtcggtcagc aggttcagga aggcgtcggc catggccggg
      421 gcgtgaccct gctggttgaa gcgcgcctct tcggggaagg tataggtatt cagccagtcc
      481 agaagctgcg taccccaact ggccaccacc tgaacctgcg ggaaatggat atgggtatcg
      541 atgaaaccgg gcaggatgag gttcgggcga tgatcgattt ccgcaatccc cggcctggcc
      601 agaaccgcgt agtcgtcgac ggccaggatg cggccatcgt cgatcaggac ggcgccgtct
      661 tcgaggtagc ggtgattgtc cgcggtttcc gccgggtcgg catgaaaatc gaggacgcgg
      721 ccccggatca gctgttgcat gggtatttgt tcaacgaaga agtggcggtc agccgggcga
      781 tcagctcggc ggcggtggtg gcggcgatga cggaggggcg cttgtcacgt gtcaggccgg
      841 cgccgatggg acagaccagc ggcgccggat cgaggccctg cttgcgggcg aaaccgctga
      901 agcgggcacg tttcgtggcg ctgccgatca tgccgacata gcacaaatcg tcgcggctca
      961 gcgcctcggc ggccagcagg aagtccagcg cgtgatcatg ggtcaggatg acgacggcgc
     1021 tgccggggcg ggcggcgcgg atcagggctt cgggcagcgg cgacatgcgg gtttcgatgc
     1081 cgggggcggc ctgcgccagc tccggcgcgc gctgatcgat cagggtgacg ttgaccggca
     1141 gcggttgcag cgccagcgcc agcgcccggc cgacatggcc cgcaccgaag atcagcgcgt
     1201 cgggatggtc ttcgagggca gacggctcgc ggtccaggca caaggtgacg cggccgccgc
     1261 agcactggcc gatctcgggg cccagcggaa cctccatccg cgcgctttcc tcggagcgcg
     1321 cgatcatctg ccgggcgcgg tcgatggcca tgtattccag ctgtccgccg ccgatcgtgc
     1381 cggtgacgcg atggggctcg acgatcattt cggccccggc atcgcgcgga gtcgatcccg
     1441 acgtcgcgat gacgcggacc cggatcatcc ccgaagccgg ttcacggcca tcagcacgcg
     1501 ttcgggcgtg gccggcgcat ccagccgcgc cggttcgcgg tagtcgccga tcgacgcgac
     1561 ggccatgttg atcgcctcga agacgctgat gcccagcatg aagggcggtt cgcccacggc
     1621 cttggaccgc ttgatcgtgc gttcggcgtt ttccgaccag tcggccagct tcacgttgaa
     1681 gacacgcggc ctgtccgagg ccagcgggat cttgtaggtc gagggcgcat gggtgcgcaa
     1741 ttgtc
//
LOCUS       DTVW01000385            1168 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1477007, whole
            genome shotgun sequence.
ACCESSION   DTVW01000385 DTVW01000000
VERSION     DTVW01000385.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1168)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1168)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1168
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1477007"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..588)
                     /locus_tag="EYO87_05120"
     CDS             complement(<1..588)
                     /locus_tag="EYO87_05120"
                     /EC_number="3.5.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998062.1"
                     /note="Catalyzes the deamination of dCTP to form dUTP;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2'-deoxycytidine 5'-triphosphate deaminase"
                     /protein_id="HIC65372.1"
                     /translation="MNGVLPDSEIRHLIDKGAITADPAILPEQVQPASLDLRLGTTAC
                     RLRASFLAGKGHRISDRLADFGMHRMDLSGGAVLERGCVYLVPLMERLTLPDGLSAVA
                     NAKSSTGRLDLLTRLVTDDGTEFDRLPEAYDGPLYAEICPRSFSVLVRPGMRLNQLRL
                     RRGQAVLTDAELRDLDAREPLVGGKALIDQGLGFSV"
     gene            complement(658..735)
                     /locus_tag="EYO87_05125"
     tRNA            complement(658..735)
                     /locus_tag="EYO87_05125"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:1.23"
                     /anticodon=(pos:complement(698..700),aa:Pro,seq:ggg)
BASE COUNT          188 a          392 c          415 g          173 t
ORIGIN      
        1 cacggaaaag ccaagcccct ggtcgatcag cgccttgccg ccgaccagcg gctcgcgggc
       61 gtccagatcg cgcaattcgg cgtccgtcag caccgcctga ccgcgccgca ggcgaagctg
      121 gttcaggcgc attccggggc gcaccagaac cgaaaagctg cgcgggcaga tttcggcata
      181 aaggggaccg tcataggctt cgggcaggcg atcgaactcg gtgccgtcat cggtcacaag
      241 ccgggtcagc agatccagcc gcccggtcga ggatttggca ttggcgacgg cgctcagccc
      301 atcgggcagg gtcagccgtt ccatcagcgg caccagatag acgcatcccc gttccagaac
      361 ggcaccgccg gacagatcca tccggtgcat tccgaaatcg gccagacggt cgctgatgcg
      421 atggcccttt ccggccagaa agctggcgcg cagtcgacag gccgtcgtgc ccagccgcaa
      481 gtccaggctg gcgggctgga cctgttcggg caggatcgcg ggatcggcgg tgatggcgcc
      541 cttatcgatc aggtgccgga tctcgctgtc gggcaggact ccgttcatgc catccttcct
      601 tgcagatcag gcggatacga aaacgcccac cccgtggagg gatgggcgtt ttcgaaatgg
      661 tcgggccggc gagattcgaa ctcgcggcct tccgcccccc agacggacgc gctaaccagg
      721 ctgcgccacg gcccgacgcc ggccatatag agcgaagcgg cgggcctgca caagggccac
      781 gggacgggaa tcttcatcct gccggtcagg tgttttcgta atgcgcgatg atgatgccgc
      841 gcagtgcggc ggcgcggggc gcggcctgct gccaccgcgc gtcgcgatgg ctggccgcgc
      901 gcaggcgaac cgacagtcgg gcaagctgcg ccagccagcc ggtggcctgc gcgtcggcgg
      961 acaggtcggg aaacagcggc agcgcatcat ggcccgactg ccggcggcgg cgctgccgcg
     1021 cgcggggcgg atggtcgggc atcggatcgt cctgcggcgc gggttcgtcg ggcatctcga
     1081 tcagatgctt cgcgatggcg gcttccttgc gcggcgtcgc ctcaggggcg ccgggcgcgg
     1141 ccacctgctc gcccaggcgc tcggcgcc
//
LOCUS       DTVW01000386            1306 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1478858, whole
            genome shotgun sequence.
ACCESSION   DTVW01000386 DTVW01000000
VERSION     DTVW01000386.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1306)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1306)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1306
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1478858"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            98..445
                     /locus_tag="EYO87_05130"
     CDS             98..445
                     /locus_tag="EYO87_05130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65373.1"
                     /translation="MIRALILAVPLTAALAAPGARAQAVNDFPTNARAEYVFACMATN
                     GENREMLDRCSCSIDQIATVLPYDDYVQAETVLRMQQTTGERASMFKGMAEMNDMVAK
                     LRRAEAEAEILCF"
     gene            complement(715..1306)
                     /locus_tag="EYO87_05135"
                     /pseudo
     CDS             complement(715..1306)
                     /locus_tag="EYO87_05135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_354419.2"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="2-polyprenylphenol 6-hydroxylase"
BASE COUNT          222 a          443 c          440 g          201 t
ORIGIN      
        1 ccttcgttct ggacagcgat cccaaggccc cgatccgcga attgctggcc gaaacgcagg
       61 gcgggacgcc cgggtaccgg aaccgcatgg tgctgcaatg atccgcgcgc tgatcctggc
      121 cgtgcccctg accgccgctc tggccgcgcc gggtgcccgg gcgcaggcgg tcaacgactt
      181 cccgaccaat gcgcgggcgg aatatgtctt cgcctgcatg gccaccaacg gcgagaatcg
      241 cgagatgctg gaccgatgtt cctgttccat cgaccagatc gcgacggtgc tgccctatga
      301 cgactacgtc caggcggaaa ccgtcctgcg gatgcagcag acgacgggcg agcgcgcctc
      361 gatgttcaag ggcatggccg agatgaacga catggtggcg aagctgcgcc gcgccgaggc
      421 cgaggccgag atcctgtgtt tctgaagccc gaagcagagg accgcgccgg gctgtggatg
      481 gatggcgacg cgcctgcgcc ggatcgcttc cgatcgggtt gaccggatcc cgaccatgcc
      541 tcttggcgat gctcttgcgg ggcggggcgc gcatcccgtc tgcgacccgg ggccggccgg
      601 caatgtttct tatcccaatg ccaggccgat cgcggcgccg gccgccagcg acagcaccgt
      661 gaccagccac aggggcacgc gcgacgcggg ggccgccggg gcgggcgcgg cgtcttcggg
      721 atgggcacgg ttccacaatg cctgttcgac gatctgcggc agcagcggtc catagcggcc
      781 gaccgtctgc gccaccttcg ccatgtccga ggccagcgcg cgcggcccca gattggactt
      841 gatgtagtcc gacacgaccg gacgcgccgc ctcccagatg ttcagctgcg gatcgaccga
      901 ccgcgccacc ccctcgacca cgaccatggt ccgttgcagc aggatcagct gcgtctgggt
      961 gcgcatcccg aagcgttccg tcacctcgaa cagataggcc agcaggctgg ccatgctgat
     1021 acggctggca tcggcgccga agatcggctc gcccacggcg cgcagggcgc gggcgaattg
     1081 cgcctcgtcg cggtcgcgcg gcacatagcc cgcctcgaaa tggacgcggg ccacgcggcg
     1141 gtaatcgcgc tggatgaagc caaagaggat ctcggcatag acgcggcggg tatattcgtc
     1201 gatctcgccc atgatgccga aatcataggc gatcacatcc ccgttcgacg caaccttcag
     1261 gttgccgtga tgcatgtccg cgtggaagaa cccgtcccgc agggca
//
LOCUS       DTVW01000387            1203 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1481038, whole
            genome shotgun sequence.
ACCESSION   DTVW01000387 DTVW01000000
VERSION     DTVW01000387.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1203)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1203)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1203
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1481038"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>1203
                     /locus_tag="EYO87_05140"
     CDS             <1..>1203
                     /locus_tag="EYO87_05140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010393687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrite/sulfite reductase"
                     /protein_id="HIC65374.1"
                     /translation="SWSTDHAEFQFLPRKFKIAISSGAKDRAIVASHDIGLRLIRRDG
                     QTGFEVWVGGGLGRTPLLGQVIRGFLPEEELLPYIEAIIATYNLSGRRDNKYKARVKI
                     TVAERGLDVFRAETEEEFARRRQAFLGADREALAIFRDRFAAPAFRTAPVAGYEAQRQ
                     ANPAFRSWTDTNVKAHKVDGYASAIVTFKAPGQTPGDASAGQMRLLADLAERFGHADL
                     RVMHDQNVALPHVHKSDLPDLYLALRQAGLATANAGLTSDIIACPGMDYCTLATARSI
                     PIAEEIADHFRAAGLENEIGNLNIRISGCINACGHHHLGHIGILGLDRAGVENYQITL
                     GGDAYDIPAIGQRAGAGFPAEEVVPAIDRLLRAYLELREDETERFIDAYRRLGPVPFK
                     AALYPETAD"
BASE COUNT          204 a          418 c          383 g          198 t
ORIGIN      
        1 agctggtcca ccgaccatgc cgaattccag ttcctgccgc gcaagttcaa gatcgccatt
       61 tccagcggcg ccaaggatcg cgccatcgtg gcctctcacg acatcggatt gcggttgatc
      121 cggcgcgacg gccagaccgg tttcgaggtc tgggtgggcg gcggactggg ccggacgccg
      181 cttctgggcc aggtgatccg cggcttcctg ccggaagaag aactgttgcc ctatatcgag
      241 gcgatcatcg cgacctataa cctgtccggc cggcgcgaca acaaatacaa ggcgcgggtc
      301 aagatcaccg tggccgagcg cgggctggac gtgttcaggg ccgagaccga ggaggaattc
      361 gcgcgccggc gccaggcctt cctgggcgcc gatcgcgagg cgctggcgat ctttcgcgac
      421 cgcttcgccg cgccggcctt ccgcaccgcg ccggtcgcgg gctacgaggc gcagcgtcag
      481 gcaaatccgg ccttccgcag ctggaccgac accaacgtca aggctcacaa ggtcgacggc
      541 tatgccagcg cgatcgtcac cttcaaggcg ccgggccaga cgccgggcga cgcctcggcc
      601 ggacagatgc gcctgctggc cgatctggcc gagcgctttg gccatgccga tctgcgggtc
      661 atgcacgacc agaacgtcgc gctgccccat gtccacaaat ccgatctgcc cgacctgtat
      721 ctggccctgc gccaggccgg gctggccacg gccaatgccg ggttgaccag cgatatcatc
      781 gcctgccccg gaatggatta ctgcaccctg gccaccgcgc ggtcgatccc catcgccgag
      841 gaaatcgcgg atcatttccg tgccgccggg ctggaaaacg aaatcggcaa cctgaacatc
      901 cgcatctcgg gctgcatcaa tgcctgcggc caccaccacc tgggccatat cggcatcctg
      961 ggactggacc gcgcgggcgt cgagaattac cagatcacgc tgggcggcga tgcctatgac
     1021 attccggcca tcggccagcg tgccggcgcg ggttttcctg ccgaagaggt cgtgcctgcc
     1081 atcgaccgcc tgctgcgcgc ctatctggag cttcgcgagg acgagaccga gcgtttcatc
     1141 gacgcctatc gccgccttgg gcccgtgccg ttcaaggccg cgctctatcc cgagacggcg
     1201 gat
//
LOCUS       DTVW01000388            1062 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1481119, whole
            genome shotgun sequence.
ACCESSION   DTVW01000388 DTVW01000000
VERSION     DTVW01000388.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1062)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1062)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1062
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1481119"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..898)
                     /locus_tag="EYO87_05145"
     CDS             complement(<1..898)
                     /locus_tag="EYO87_05145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010394605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HIC65375.1"
                     /translation="MKFNRRSLVLGASAGVLASPFIRLRPANAAEFTMKLANNQPLEH
                     PTNIRAAEAVKAIAEQSDGRVDVQVFPSNQLGADTDVLSQLRAGGVEFFLLSPVILST
                     LVPNASINGIGFAFPDYDAVWKAMDGELGAYERGQIEDAGLVVMEKIWDNGFRQTTTS
                     TKPIEGPADLEGFKIRVPVSPLWTSMFTAFGSAPTSINFAEVYTALQTGVVDGQENPL
                     AIIKVAKMWEVQKYVSMTNHMWDGFWMLANRRAWGALPEDLQQIVAENFNKAGMDQRQ
                     DVMQLNADLRGELEGQGLVFNDV"
     gene            complement(918..>1062)
                     /locus_tag="EYO87_05150"
     CDS             complement(918..>1062)
                     /locus_tag="EYO87_05150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010394603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HIC65376.1"
                     /translation="GIGFYIACKIGGAEADQVMARVWPYLAALMVGLAVIAAIPQFST
                     AFL"
BASE COUNT          199 a          342 c          326 g          195 t
ORIGIN      
        1 cgacatcgtt gaagaccaga ccctgcccct ccagttcgcc ccgcagatcg gcgttcaact
       61 gcatcacgtc ctggcgctgg tccatgcctg ccttgttgaa gttctcggcc acgatctgtt
      121 gcagatcctc gggcagggcg ccccaggcgc ggcggttggc cagcatccag aacccgtccc
      181 acatgtggtt ggtcatgctg acatatttct gcacctccca catcttggcg accttgatga
      241 tggccagcgg gttttcctgc ccgtcgacga cgccggtctg caatgcggta tagacctcgg
      301 cgaagttgat cgaggtcggc gccgatccga aagcggtgaa catcgaggtc cagagcggcg
      361 agacgggaac ccggatcttg aagccttcca gatcggccgg cccctcgatc ggcttggtcg
      421 acgtggtcgt ctggcgaaag ccgttatccc agatcttctc catcacgacc aggcccgcat
      481 cctcgatctg gccgcgctca taagcgccca gttcgccatc catcgccttc cagacggcat
      541 cgtaatccgg gaaggcgaag ccgataccgt tgatcgaggc attgggcacc agcgtcgaca
      601 ggatcaccgg cgacagcagg aagaattcga ccccgccggc gcgcaactgg ctcagcacgt
      661 cggtatccgc gcccagctgg ttcgatggaa agacctgcac atcgacgcgg ccgtcggatt
      721 gttcggcaat ggccttgacc gcctcggcgg cgcggatatt ggtcgggtgt tccagcggct
      781 ggttgttggc cagcttcatg gtgaattcgg cggcattggc agggcgcagc cggatgaacg
      841 gcgaggccag caccccggcc gaggccccca gaaccagcga acggcggttg aatttcatga
      901 tcatgtcctc ccttggatca tagaaacgcg gtcgagaatt gcggaatcgc ggcgatcacg
      961 gccagaccga ccatcagcgc ggccagatag ggccagacgc gggccatgac ctgatcggcc
     1021 tcggccccgc cgatcttgca ggcgatgtag aaaccgatgc cg
//
LOCUS       DTVW01000389            1054 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1481182, whole
            genome shotgun sequence.
ACCESSION   DTVW01000389 DTVW01000000
VERSION     DTVW01000389.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1054)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1054)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1054
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1481182"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..261)
                     /locus_tag="EYO87_05155"
     CDS             complement(<1..261)
                     /locus_tag="EYO87_05155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009803567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HIC65377.1"
                     /translation="MNAAPDCGPLAGLRVIDLGQVYLGPYCGLMFALMGAEVIKVEPP
                     GGDSIRGIAGGRENPAAMMLNSSKQSVTLDLGSEGGRSALLAL"
     gene            complement(258..989)
                     /locus_tag="EYO87_05160"
     CDS             complement(258..989)
                     /locus_tag="EYO87_05160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009803568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase"
                     /protein_id="HIC65378.1"
                     /translation="MTFDFPEKKNALDQDARKEMERIVTQVRDDDRVRALLITGAGGA
                     FCAGGDISTFAGSSPVAMRDRMKQQHRVTRMLYDLEKPVVAAVAGPAFGVGFNIALLA
                     DVILAAPSARFCQAYARVAIVPDGGGLYLLARTVGTQRAKAMFLTAQVIDAQEAHDLG
                     IVHAIHEEDALDAEADALAVRLAEGPTRAFGLGKSMLNRGMDCDFATYLEIEATAEAH
                     IMQTADHREAVASFKEKRPPGFVGS"
BASE COUNT          192 a          363 c          318 g          181 t
ORIGIN      
        1 cagcgccagc agggcgctgc gcccgccctc ggaccccaga tcaagcgtca cgctctgttt
       61 gctggaattg agcatcatcg ctgcggggtt ctcgcgcccg cccgcgatgc cgcggatact
      121 gtcgccgccg ggcggctcga ccttgatgac ctcggccccc atgagcgcga acatcagacc
      181 gcaatagggc ccaaggtaga cctgcccgag gtcgatcacc cgaagaccgg ccagcgggcc
      241 acaatcgggc gccgcgttca tgatccgaca aagcccggcg ggcgcttttc cttgaaagag
      301 gcgaccgcct cgcggtgatc tgcggtctgc atgatatggg cttcggcggt tgcctcgatc
      361 tcgagatagg tcgcgaaatc gcaatccatg ccacggttca gcatcgactt gcccagccca
      421 aaggctcggg tcggcccttc ggccagacgc acggccagcg catcggcctc tgcgtcgagc
      481 gcgtcttctt cgtggattgc gtggacgatc ccaaggtcgt gcgcctcttg ggcatcgatc
      541 acctgggccg tcaggaacat cgccttcgcc cgctgcgtcc cgaccgtccg cgccagcaag
      601 taaagcccgc caccgtcggg cacgatcgcc acgcgcgcat aggcctggca aaagcgggcc
      661 gagggcgcgg ccaggatcac gtcagccaga agcgcaatgt tgaaccccac gccaaaggcc
      721 ggcccggcaa ccgccgcgac gaccggcttt tcaagatcat atagcatccg ggttacgcgg
      781 tgctgttgtt tcatgcggtc ccgcatggcc acaggcgaag aaccggcgaa ggtgctgata
      841 tcgcctccgg cgcaaaacgc gcccccggca cccgtgatca acagcgcgcg cacgcggtca
      901 tcgtcgcgca cctgggtgac gatgcgttcc atctctttgc gtgcgtcttg atcaagggca
      961 ttcttcttct cgggaaaatc gaaagtcatc cgaccaacgc tttccgagcg gctgtagagc
     1021 aatggcaccg cttcctcctc ccaggaatgg gcta
//
LOCUS       DTVW01000390            2883 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1482659, whole
            genome shotgun sequence.
ACCESSION   DTVW01000390 DTVW01000000
VERSION     DTVW01000390.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2883)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2883)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2883
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1482659"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..572
                     /locus_tag="EYO87_05165"
     CDS             <1..572
                     /locus_tag="EYO87_05165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011750144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HIC65379.1"
                     /translation="RDIRAIDGVPLIKLTLWTMIGGGAGSVLLLVSSNKAFALLVPFL
                     LLIATIVFYWSEPIRRHASRWQSVVMPFGLGTLLPMSIYGGYFNGGLGIIMLAVFSMW
                     GMRDLHQMNGLKSWLSAALAIIAFAIFAVGGKIVWIPAAIMSAGTIIGGYAGAPIARR
                     IPRGPLRALIAVVGFGMTAIFFWRLAKGA"
     gene            577..924
                     /locus_tag="EYO87_05170"
     CDS             577..924
                     /locus_tag="EYO87_05170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002719888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HIC65380.1"
                     /translation="MSDIRRIEAGQRMSQAVVANGMVWLAGQVAQPGRPAAEQTRAIL
                     AQVDSLLKKAGTDKSRIVSAQIWLADMADFAAMNEVWDGWVAPGHAPARATGESKLAT
                     PDYKVEIIVTAVL"
     gene            complement(908..2062)
                     /gene="lpxB"
                     /locus_tag="EYO87_05175"
     CDS             complement(908..2062)
                     /gene="lpxB"
                     /locus_tag="EYO87_05175"
                     /EC_number="2.4.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018000146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-A-disaccharide synthase"
                     /protein_id="HIC65381.1"
                     /translation="MTFFLIAGETSGDQLGAALMAGMRQLRPDVAFTGIGGPQMMAQG
                     MDSLFPMDELSLMGIWEVLPKFRHLKRRIAQAAEAVIAAAPEALITIDSPDFCLRVAR
                     AVRAARPDLRTIHYVAPSVWAWRPGRALKMAEVIDHVLAILPFEPPLMRAAGMRCDFV
                     GHPIATAEVAGPDQAALFRETHAIAPEAPVVLCLPGSRRSEVSRLARRFDEALLRLRD
                     RLPEIRIVLPTVPGVADMVHEMTRRWPTAPIVLEDPVEKRAAFAASDLALAASGTVSL
                     ELAANRIPMVIGYDMAPLSRLVVGMLLRTDTVTLVNLVSDTRAVPEFLGKACQPGAIA
                     QALQDALEDSTARKAQLDAMDLAIDRLGKGGEAPGLRAARSVLGSVTEPR"
     gene            complement(2135..>2883)
                     /locus_tag="EYO87_05180"
     CDS             complement(2135..>2883)
                     /locus_tag="EYO87_05180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010395795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="LpxI family protein"
                     /protein_id="HIC65382.1"
                     /translation="DDPLVYALDGFAPPVPATPFRLERLVPFLDRLIEHGVDRVIFAG
                     AVRRPRLDPEAFDPRTAQLVPRILTALQSGDDAALRMVLDIFEEHGLTICGVDQIAPD
                     LVPEAGILTGAPTDSDRRDAARAARILSHMGDLDLGQGAVVAQGLCMALETQPGTAAM
                     LDFAARHTGLRPDPTGAKGVFYKAPKPGQDRRVDLPTIGPDSVDQAAAADLAGIAWQA
                     GGVILLDRQQTVQRARAAGLFLWARPQEGI"
BASE COUNT          477 a          980 c          972 g          454 t
ORIGIN      
        1 gccgcgacat ccgcgcgatc gacggcgtgc cgctgatcaa gctgaccctg tggacgatga
       61 tcggcggcgg cgccggcagt gtcctgctgc tggtcagttc gaacaaggcc ttcgcgctgc
      121 tggtcccctt cctgctgctg atcgcgacca tcgtgttcta ctggtccgaa ccgatccgcc
      181 gccatgcttc ccgctggcaa tcggtggtga tgcccttcgg gctgggcacg cttcttccca
      241 tgtcgatcta tggcggctat ttcaacggcg gcctggggat catcatgctt gcggtcttct
      301 cgatgtgggg aatgcgcgat ctgcaccaga tgaacggtct gaaaagctgg ctcagcgcgg
      361 cgctggcgat catcgccttc gccatcttcg cggttggtgg caagatcgtg tggattccgg
      421 ccgcgatcat gtcggctgga accatcatcg gcggctatgc cggggccccg atagcgcggc
      481 gcatcccgcg cgggccgctg cgcgcattga tcgccgtggt cggtttcggg atgaccgcga
      541 tctttttctg gcgtctcgca aaaggagcat gaagacatga gcgacatcag gcgtatcgaa
      601 gccggccagc ggatgagcca ggcggtcgtg gcgaatggaa tggtctggct ggcaggccag
      661 gtggcccagc cgggcaggcc cgccgccgaa cagacccgcg cgatcctggc ccaggtcgac
      721 tcgctgctga agaaggccgg cacggacaaa agccggatcg tctcggccca gatctggctg
      781 gccgacatgg ccgatttcgc cgccatgaac gaggtctggg acggctgggt cgcgcctggc
      841 cacgccccgg cccgcgcgac cggcgaatcg aaactggcga cacccgatta caaggtcgag
      901 atcatcgtca ccgcggttct gtaaccgaac caaggaccga gcgtgccgcg cgcagtcccg
      961 gcgcctcgcc gcccttgccc agccggtcta tggccagatc catcgcgtcc agttgggcct
     1021 tgcgcgcggt gctgtcttcc agcgcatcct gaagcgcctg ggcgatggcg ccgggttggc
     1081 aggccttgcc caggaattcg ggcacggcgc gggtgtcgct gaccagattg accagcgtga
     1141 ccgtatcggt gcgcagaagc atccccacga ccaggcggct cagcggggcc atgtcgtagc
     1201 cgatgaccat cggaatccgg ttcgccgcca gttccaggct gaccgtcccc gaggccgcca
     1261 aggccagatc ggaggccgcg aaggccgcgc gcttttccac gggatcctcc agcacgatcg
     1321 gcgccgtggg ccagcgccgt gtcatttcat gcaccatatc cgcgacgccc ggcacggtcg
     1381 gcaggacgat gcggatttcg ggcagccggt cgcgcaggcg cagcagcgcc tcgtcaaaac
     1441 gccgcgccag ccgcgacact tcggatcggc gcgaccccgg caggcacagg acaacgggcg
     1501 cctcgggcgc gatggcatgg gtctcgcgga acagcgccgc ctggtccgga cccgccactt
     1561 cggcggtggc gatggggtgg ccgacgaaat cgcagcgcat tccggcagcc cgcatcagcg
     1621 gcggctcgaa gggcaggatc gccagaacat ggtcgatcac ctcggccatc ttcagcgccc
     1681 ggcctgggcg ccaggcccag accgagggcg cgacatagtg gatcgtgcgc agatcgggcc
     1741 gcgcggcgcg aaccgcacgc gcgacccgca gacagaaatc cgggctgtcg atggtgatca
     1801 gcgcctcggg ggccgccgcg atcacggcct cggcagcctg ggcgatgcgg cgcttcagat
     1861 gacgaaattt cggcagcacc tcccagattc ccatcaatga cagctcgtcc atcggaaaca
     1921 ggctgtccat gccttgcgcc atcatctgcg gcccgccgat gccggtaaag gccacatcgg
     1981 gccgcaactg gcgcatcccg gccatcaggg ccgcgcccag ttggtcgccc gaggtctcgc
     2041 ccgcgatcag gaagaacgtc atgcggctcc tacggttgct gccttgccca tgggtattgg
     2101 ggcaacgaag aagaaaccag cccttcttcg ttgatcaaat accctcttgc ggccgtgccc
     2161 acagaaacag ccccgcagcc ctggcgcgct gcaccgtctg ctggcgatcc agcaggatga
     2221 cgccgcccgc ctgccacgcg atgccggcaa gatccgctgc cgcagcctga tcgacgctgt
     2281 cggggccgat cgtcggcaga tcgacgcgcc gatcctgccc gggtttcgga gccttgtaga
     2341 agacgccttt ggcgccggtc gggtcggggc gcagtccggt gtggcgggcg gcgaagtcaa
     2401 gcatggctgc cgtgcccggc tgggtttcca gcgccatgca caatccttgc gccaccaccg
     2461 cgccctgccc cagatccagg tcgcccatat gcgacaggat ccgggccgcg cgggcggcgt
     2521 cgcggcggtc ggaatcggtc ggggcgccgg tcaggatccc cgcctccggc accagatccg
     2581 gggcgatctg gtcgacgccg cagatggtca ggccgtgttc ctcgaagata tccagcacca
     2641 tgcgcagggc cgcgtcgtcg cccgattgca gcgcggtcag gatgcgcggg accaattgcg
     2701 ccgtgcgcgg atcgaaagcc tcgggatcca gccgggggcg gcggacggca cccgcgaaga
     2761 tcacccggtc cacaccgtgt tcaatcaggc ggtcgagaaa gggaaccagc cgttccagcc
     2821 gaaacggggt cgcgggcacg ggcggcgcga aaccgtccag cgcatagacc agcggatcgt
     2881 cca
//
LOCUS       DTVW01000391            2904 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1484431, whole
            genome shotgun sequence.
ACCESSION   DTVW01000391 DTVW01000000
VERSION     DTVW01000391.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2904)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2904)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2904
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1484431"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..310
                     /locus_tag="EYO87_05185"
     CDS             <1..310
                     /locus_tag="EYO87_05185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009459630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="excinuclease ABC subunit A"
                     /protein_id="HIC65383.1"
                     /translation="ELQRSQRGRSLYVLDEPTTGLHASDADRLLVQLQRLVDAGNSVV
                     MIEHDMRAVAQADWVIDVGPGAGDAGGKIVVAGSPQQVARTPGSRTAPFLVEELARAK
                     "
     gene            complement(412..639)
                     /locus_tag="EYO87_05190"
     CDS             complement(412..639)
                     /locus_tag="EYO87_05190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009573794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2274 domain-containing protein"
                     /protein_id="HIC65384.1"
                     /translation="MAKLKLGPLPDDKPVKVTVELPAPLHRDLIAYAEVLARETGQTV
                     ADPMKLIVPMLERFIATDRGFAKAKREPGRS"
     gene            complement(643..1773)
                     /locus_tag="EYO87_05195"
     CDS             complement(643..1773)
                     /locus_tag="EYO87_05195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrbI/VirB10 family protein"
                     /protein_id="HIC65385.1"
                     /translation="MTDTTNTTDASPMRLRAEPPRVTRLSRKMLAGVGAVALFGVGGA
                     LIYALQTRDAGPGNEELYSTENRPTADGLSGLPRDYTGPVLGPALPGDLGRPILDAQN
                     RGQPVAPPVMATPAVDPEEQRRLAEEEAARVSRVFFQTAPGTGTATGIAMPGLGLPSG
                     ATGPQDRHTAFLNGPVDRQTVALDRIMAPASPYILQAGAVIPAAMITGIRSDLPGQIT
                     AQVTENVYDSPTGSLLLIPQGTRIIGQYDAGVTFGQRRVLLVWNRLILPNGRSIVLER
                     QPGADASGYAGLEDGVDYHWWDLMKAAGLSTLLGVGTELATSDDDRLIRAIRDGAQDT
                     INQAGQQIIQRQLQVTPTLTIRPGFPVRVIVTRDLVLESYGG"
     gene            complement(1770..2765)
                     /gene="trbG"
                     /locus_tag="EYO87_05200"
     CDS             complement(1770..2765)
                     /gene="trbG"
                     /locus_tag="EYO87_05200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018001235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-type conjugative transfer protein TrbG"
                     /protein_id="HIC65386.1"
                     /translation="MRTITRTPTIAAVLLSATMLAGCATNRTQQWSYDDSVPPLPVVQ
                     AAATDETPRPLHTPPAWTVARGGAAAGTPTGRVENANAAARVEPRRAGYYNAIQIYPW
                     SEGALYQVYAAVGQITTIALEPGESLTGAGPIAAGDTARWIIGDTESGSGANRRVHIL
                     VKPTRPDIATNLVVTTDRRTYMIELRARESLYMPAVAWAYPAPPAGQRQTVPAAPVIP
                     AEAARNYRYGLTGDSPPWRPVSVFDDGRRVYVVFPAGIVQGEMPPIFVLGSDGEPQIV
                     NSRIHQNILIVDRLFGAAELRLGGGTRQQVVRIVRINPTQAAADQPASATGDSPS"
     gene            complement(2762..>2904)
                     /locus_tag="EYO87_05205"
     CDS             complement(2762..>2904)
                     /locus_tag="EYO87_05205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005796700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="conjugal transfer protein TrbF"
                     /protein_id="HIC65387.1"
                     /translation="RYRCISAPWTAILTIVIQTPRDAERLRANPLGIYVNAISWSREM
                     SQ"
BASE COUNT          444 a          910 c         1049 g          501 t
ORIGIN      
        1 cgagcttcag cgcagccagc gcgggcgcag tctctacgtg ctcgacgagc cgaccaccgg
       61 cctgcatgcc tcggacgccg accggctgtt ggtacaattg cagcggctgg tcgatgccgg
      121 aaatagtgtg gtgatgatcg agcacgacat gcgcgctgtg gcgcaggccg attgggtaat
      181 cgatgtagga ccaggtgctg gcgatgctgg cggcaagata gtcgtggccg gctcccctca
      241 acaggtggcc cgaacacccg gtagccggac ggcgccgttt cttgtcgaag aactggcgcg
      301 ggccaagtag tccgacatgc caacgatagc cgtccgcccg cttcgttgct ttgggtgccg
      361 agacgatgat cgcaaaacgc tacgtcgagt gatgaacctc gcgttgactt gtcacgatct
      421 tcctggctcc cgcttcgcct tagcgaagcc tcgatccgtg gcgatgaagc gttccagcat
      481 aggcacgatc agcttcatgg gatcggcgac ggtctggccg gtctcgcggg ccagcacttc
      541 ggcataggcg atcagatcgc ggtggagcgg tgccggcagc tccaccgtca ccttgacggg
      601 cttgtcgtcg ggcagcggcc ccagcttcaa cttcgccatc gctcagcctc cgtaggattc
      661 gagcacaagg tcgcgggtca cgatgaccct gaccgggaag cctggccgga tggtcagcgt
      721 gggtgtgacc tgcaattggc gctggatgat ctgttggccg gcctggttga tggtgtcctg
      781 cgccccgtcg cggatggcgc ggatcagccg gtcatcatcg ctggtcgcca actccgtgcc
      841 gacgccaagc aaggtcgaga gccctgcggc cttcatcaga tcccaccaat gatagtcgac
      901 gccatcctca agcccggcat agccgctggc atccgcgccg ggctggcgct ccagcacgat
      961 ggagcggcca ttggggagga tcagccgatt ccagaccagc agcacgcggc gctgaccgaa
     1021 ggtcacgccg gcgtcgtatt ggccgatgat gcgcgtgccc tgcgggatca gaaggaggct
     1081 gccggtcggg ctgtcataga cgttttccgt gacctgcgcg gtgatctgac cgggcagatc
     1141 ggagcggatg ccggtaatca tcgcggcggg gatgacggct ccggcctgta ggatgtaggg
     1201 cgacgctgga gccatgatgc ggtccagggc gacggtctgc cgatccaccg gcccgtttag
     1261 gaaggcggtg tgccggtcct gggggccggt cgcgccggac ggaaggccaa ggccgggcat
     1321 ggcgatgccg gttgccgtcc ccgtgccggg cgcggtctgg aaaaagacgc ggctgacgcg
     1381 cgcggcttct tcctcggcga gacggcgctg ttcctcggga tcgacggcgg gcgtcgccat
     1441 gaccggcggc gcaaccggct gtccccggtt ctgcgcatcg aggatcgggc ggccgaggtc
     1501 gccgggcaac gccggcccca ggaccgggcc ggtatagtcg cgcggtaggc cggacaagcc
     1561 gtccgccgtg ggccggttct cggtcgaata gagttcttca ttgcccggac ctgcatcgcg
     1621 ggtctggagc gcgtagatca gcgcgccgcc gacgccgaac aaggctacag cgccgacgcc
     1681 agcgagcatc ttgcgtgaca ggcgggtgac gcgcggcggt tcggcgcgca gccgcatcgg
     1741 cgaggcgtcc gtggtgttgg tggtgtctgt catgacgggg agtctccggt cgcgctggca
     1801 ggctgatcgg cggccgcctg cgtcgggttg atacggacga tcctgacgac ctgctggcgg
     1861 gtgccgccgc caaggcgcag ctcggccgca ccgaataggc ggtccacgat caggatgttc
     1921 tggtggatgc ggctgttgac gatctgcggt tcgccatcgg agccgagtac gaagatcggc
     1981 ggcatctcgc cctgcacgat cccggccggg aagacgacat agacgcgccg tccatcgtcg
     2041 aagacggaaa ccggccgcca cggcgggctg tctccggtca ggccgtagcg atagttccgc
     2101 gcggcctcgg cgggaatgac gggtgcggct ggaacggtct ggcgctggcc cgctggcggt
     2161 gccggatagg cccaggcgac ggcaggcatg tagagcgatt cccgcgcgcg cagctcgatc
     2221 atgtaggtgc gccggtcggt ggtgacgaca aggttggtgg caatgtccgg gcgtgtcggc
     2281 ttcacgagga tatggacacg gcggttcgcg ccggacccgg attccgtgtc gccgatgatc
     2341 caccttgcgg tatcacccgc cgcgatcggc cccgcgccgg tcaggctctc gcccggctcc
     2401 agcgcaatgg tggtgatctg cccgactgcg gcatagacct gatagagcgc gccctcgctc
     2461 cacggataaa tctggatcgc gttgtaatag cctgcgcggc gcggctcgac gcgagcggcg
     2521 gcgttggcgt tctcgacgcg gccggtcggt gttccagcag cggcgccgcc gcgcgcgacg
     2581 gtccacgcgg gcggcgtgtg cagcggccgg ggcgtttcgt cggtcgcggc cgcctgcacc
     2641 actggcagcg gcggcacgct atcgtcatag ctccattgct gcgtccggtt ggtggcgcag
     2701 cctgcgagca tggtggccga aagcagcacg gccgcgattg tgggggtgcg ggtgatcgtc
     2761 ctcattggct catctcccgt gaccacgaaa ttgcattgac gtagattccc aacgggttgg
     2821 cgcgcaggcg ctcggcatcg cgcggcgtct ggatcacgat ggtcaggatc gccgtccatg
     2881 gcgccgagat gcagcggtac ctcg
//
LOCUS       DTVW01000392            1147 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1484493, whole
            genome shotgun sequence.
ACCESSION   DTVW01000392 DTVW01000000
VERSION     DTVW01000392.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1147)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1147)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1147
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1484493"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..780
                     /gene="pip"
                     /locus_tag="EYO87_05210"
     CDS             <1..780
                     /gene="pip"
                     /locus_tag="EYO87_05210"
                     /EC_number="3.4.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010393539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl aminopeptidase"
                     /protein_id="HIC65388.1"
                     /translation="PSHYRVVLFDQRGCGRSRPSASVRANTTQHLIADMEMIRETLGL
                     ADWLLFGGSWGATLALAYAQAHPDRVTGLVLRGVFLGRRTELDWFYGGGAGRFFPDLW
                     RRFQDPIPEAERGNMIAAYHRRLFSDDQGRQGRYALPWLMWENALAGLQAAPVSHAPA
                     DYARAFARLENHYFMNGCFLSENQLLEDRHLIEHLPAVIVQGRYDMVCPPLGAHDLAQ
                     GWANCDLRIVPASGHALSEPGISAELLRVMDALRDRNQRED"
     gene            782..>1147
                     /locus_tag="EYO87_05215"
     CDS             782..>1147
                     /locus_tag="EYO87_05215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007916213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan-rich sensory protein"
                     /protein_id="HIC65389.1"
                     /translation="MLFAIFLIACLAAAATGMVFKPGDWYEGLAKPAFTPPKWVFPVA
                     WSVIYLLLAWAAARLAVLPRNGIVMALWAAQIALNTLWTPVFFGAHRMGFAMAVMAVL
                     WLVVAALVTLAFRLDAVAAV"
BASE COUNT          155 a          364 c          398 g          230 t
ORIGIN      
        1 cccagccact accgcgtcgt cctgttcgac cagcgcggct gcggacgctc gcgcccctcg
       61 gcctcggttc gggcgaacac cacgcagcac ctgatcgcgg atatggaaat gatccgcgag
      121 acgctggggc tggccgactg gctgctgttc ggcggcagtt ggggcgcgac gctggctttg
      181 gcctatgcgc aggcgcatcc tgaccgggtg accgggctcg tgctgcgcgg cgtctttctt
      241 ggccgccgga ccgagctgga ttggttctat ggcggcggcg cgggccgttt ctttcccgat
      301 ctgtggcggc ggttccagga cccgatcccc gaagccgagc gcgggaacat gatcgcggcc
      361 tatcaccgcc gcctgttttc cgacgatcag ggccggcagg gtcgctacgc cctgccctgg
      421 ctgatgtggg aaaacgcgct ggccggcttg caggccgcgc ccgtcagcca cgcgcccgcc
      481 gattatgccc gcgcctttgc ccggctggaa aaccactatt tcatgaatgg ctgcttcctg
      541 agcgagaatc agttgctgga ggatcggcat ctgatcgaac acctgccggc ggtgatcgtg
      601 cagggccgat atgacatggt ctgcccgccg cttggcgcgc atgatctggc gcagggatgg
      661 gcgaattgcg atctgcggat cgttccggcc tcggggcatg ctttgtcgga acccggaatc
      721 tcggccgaat tgctgcgcgt catggatgcg ttgcgcgacc ggaaccagcg agaggattag
      781 gatgctgttc gcgatctttc tgattgcctg tctggcggcc gccgcgacag gcatggtgtt
      841 caagcccggc gattggtacg aaggattggc aaagcccgcc ttcacgccgc cgaaatgggt
      901 ctttcccgtc gcctggagcg tgatctacct gcttctggcc tgggccgccg cgcgactggc
      961 cgttctgccc cgaaacggca tcgtcatggc gctgtgggcc gcgcagatag ccctgaacac
     1021 gctgtggacg ccggtcttct tcggcgccca ccggatgggg ttcgcgatgg ctgtcatggc
     1081 ggtgctgtgg ctggtcgtgg cggcgctggt cacgctggct ttccggctgg acgcggtggc
     1141 cgcggtc
//
LOCUS       DTVW01000393            1270 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1486117, whole
            genome shotgun sequence.
ACCESSION   DTVW01000393 DTVW01000000
VERSION     DTVW01000393.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1270)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1270)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1270
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1486117"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..604
                     /gene="gatB"
                     /locus_tag="EYO87_05220"
     CDS             <1..604
                     /gene="gatB"
                     /locus_tag="EYO87_05220"
                     /EC_number="6.3.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352037.1"
                     /note="allows the formation of correctly charged
                     Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation
                     of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms
                     which lack either or both of asparaginyl-tRNA or
                     glutaminyl-tRNA synthetases; reaction takes place in the
                     presence of glutamine and ATP through an activated
                     phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     GatCAB subunit B"
                     /protein_id="HIC65390.1"
                     /translation="PDLLPLDIEQAWVDAIAGDMPELPDEKKARFVKEMGLSEYDAGV
                     LTADVENANYFEAVAQGRDGKAAANWVINELFGRLNKEGLTIETSPISAAQLGGVIDL
                     IGKGEISGKIAKELFEIIWTEGGDPAGIVEARGMKQVTDIGAIEAVVDQIIAANPAQV
                     EKARANPKLAGWFVGQVLKASGGKANPAAVNQLVAKKLQL"
     gene            740..1210
                     /locus_tag="EYO87_05225"
     CDS             740..1210
                     /locus_tag="EYO87_05225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4177 domain-containing protein"
                     /protein_id="HIC65391.1"
                     /translation="MPFEYTVIPAPTRGEKARDVKTPTDRYALAVTQELNRMAKDGWE
                     YIRADVLPSDERSGLTGRTTIYHNLLVFRRKADATETPEPERQQIPQPEYPVAAAPVR
                     KPQPAPALPEAAAPQPPRRVSETVPAATADAEPIVKENPTGTEPPAPRTEPDRI"
BASE COUNT          265 a          402 c          418 g          185 t
ORIGIN      
        1 tcccgacctg ttgccgctgg acatcgaaca ggcatgggtc gatgccatcg caggcgatat
       61 gcccgaattg cccgatgaaa agaaggcccg ctttgtcaag gagatggggc tgtcggaata
      121 tgatgcgggg gtgctgaccg cggatgtcga gaacgccaat tatttcgagg ctgtcgcgca
      181 gggccgcgat ggcaaggcgg ccgcgaactg ggtgatcaac gagctgttcg gtcgtctgaa
      241 caaggaaggc ctgacgatcg agacctcgcc catctcggcg gcgcagcttg gcggcgtgat
      301 cgatctgatc ggcaagggcg agatttcggg caagatcgcc aaggaattgt tcgagatcat
      361 ctggaccgag ggcggcgacc cggccgggat cgtcgaggcg cgcggcatga aacaggtcac
      421 ggacataggc gcgatcgagg ccgtcgtgga ccagatcatc gccgccaatc ccgcccaggt
      481 cgaaaaggcc agggccaatc cgaaactggc gggctggttc gtgggccagg tgctgaaggc
      541 cagcggcggc aaggcaaatc cggccgccgt caaccaactg gtcgcaaaaa agctgcaatt
      601 gtagcggctg cggcggcaga gggtcgcgca ggctgaaacg gcggccactt cctctgtcgg
      661 agatgacccc gccgcccttg gcaagcgatg cggcatctgc tctaccttct ggttgatgca
      721 aggttcagga cgcagacaga tgcccttcga atacaccgtc attccggccc ccacgcgcgg
      781 cgagaaagcc agggacgtca agaccccgac cgaccgctat gcgctggcag tgacgcagga
      841 actgaaccgg atggcaaagg atggctggga atatatccgc gccgacgtgt tgcccagcga
      901 cgaacgcagc ggcctgacgg ggcggacgac gatctatcac aacctcttgg ttttccgccg
      961 caaggcagac gccaccgaga cgccagaacc cgaaaggcag cagattccgc aacccgaata
     1021 tcccgtcgcc gccgcgcccg tgcgcaagcc ccagccggca ccggcgctgc ccgaggccgc
     1081 ggcaccgcag cccccgcgtc gggtttccga aacggtgccg gccgccaccg ccgacgccga
     1141 gccgattgtc aaggaaaacc cgaccgggac cgaacctccc gcaccgcgga ccgagcctga
     1201 ccggatttag ccctgcggtt cagggatcat gccggatcgg cagcgggcga cgtctcttcg
     1261 acgatgacca
//
LOCUS       DTVW01000394            3520 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1487279, whole
            genome shotgun sequence.
ACCESSION   DTVW01000394 DTVW01000000
VERSION     DTVW01000394.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3520)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3520)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3520
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1487279"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..640)
                     /locus_tag="EYO87_05230"
     CDS             complement(<1..640)
                     /locus_tag="EYO87_05230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011455429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine-5'-phosphate glycosidase"
                     /protein_id="HIC65392.1"
                     /translation="MTAPLTFSPEVSAALDAGDPVVALESTIITHGMPFPQNLDMARQ
                     VEAVVRQAGATPATIAVMGGRIHIGLTDTALQDLARTPPERAMKLSRADLAVCVADGR
                     TGATTVAATMICAALAGIRVFATGGIGGVHRGAETSFDISADLQELARTPVTVVAAGA
                     KAILDLPKTWEVLETLGVPVIAYAQDELPAFWSRTSGIPAPLRMDSADQIARA"
     gene            complement(767..1648)
                     /locus_tag="EYO87_05235"
     CDS             complement(767..1648)
                     /locus_tag="EYO87_05235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kinase"
                     /protein_id="HIC65393.1"
                     /translation="MTDRPDILCIGAMLWDVIGRAPRRMAPGADVPGRIRHLPGGVAL
                     NVAVALARRGLAPAVLSAVGRDPEGCALVAEAQRLGVLTGWLSRETGLPTDCYMGIED
                     SEGLIAAIADAHSLERAGGAILAPLSGDLAGWTAPVVLDGNLTEDLLSAIARDPRLAG
                     ADLRIVPASPGKAERLEPLIAARRGCFYLNRLEAEILAGRSCPDAAAAAEAVVARGAA
                     RVLVTDGAHPAAEAMANAPTLTCAPPHVTVARVTGAGDCFLAAHLAAELKAQPRGDAL
                     RRAVEASAAHVSGRDVP"
     gene            complement(1645..1992)
                     /locus_tag="EYO87_05240"
     CDS             complement(1645..1992)
                     /locus_tag="EYO87_05240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ArsR family transcriptional regulator"
                     /protein_id="HIC65394.1"
                     /translation="MTLPDPDRLNLIFAALADPTRRRVLSMLLEDDMAVSDVAHPFEM
                     SLTAISKHLTVLAAAGLIRQERRGRITWCMLDPDGMRRASVWMQGFGQFDPVDLDDFE
                     RFLKAEMKEWTEE"
     gene            2187..2534
                     /locus_tag="EYO87_05245"
     CDS             2187..2534
                     /locus_tag="EYO87_05245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015498422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AtpZ/AtpI family protein"
                     /protein_id="HIC65395.1"
                     /translation="MAEGPRTGSDREDEASRLRDLEERLSKLTPKPKADAPMAGHDQA
                     HLAWRMVIEIVAGIGIGFGIGYGLDYLLGTTPLLMILFIFLGFAAGIKTMMRTAAELD
                     RKPGPAPETEKRD"
     gene            2582..3289
                     /locus_tag="EYO87_05250"
     CDS             2582..3289
                     /locus_tag="EYO87_05250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020056910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HIC65396.1"
                     /translation="MQQFEVSPLFGDGPVHWYTPTNVTLWMAIAVLAITALMVLGTRG
                     RAIVPNRLQSVAELAYGMIHKMVEDVAGKDGLKYFPYIMTLFMFIVFGNMLGLLPKSF
                     TVTSHVAVTGVLALAVFISVTTIGFLKNGTAFLGLFWVTSAPLVLRPVLALIELISYF
                     VRPVSHSVRLAGNMMAGHAVIKVFAGFSAIAVISPLSILAVTAMFGLELLVAFIQAYV
                     FTILTCVYLKDALHPSH"
     gene            3356..>3520
                     /locus_tag="EYO87_05255"
     CDS             3356..>3520
                     /locus_tag="EYO87_05255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019954520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit C"
                     /protein_id="HIC65397.1"
                     /translation="MEGNIAQLGQYIGAGLAAIGSGVAAVGVGNVAGNFLSGALRNPS
                     AAAGQFTNAIV"
BASE COUNT          569 a         1194 c         1161 g          596 t
ORIGIN      
        1 cggccctggc gatctggtcc gcgctgtcca tgcgcagcgg cgccggaata ccgctggtcc
       61 gcgaccagaa ggcgggcaat tcgtcctgcg cataggcgat gaccggcacg cccagcgttt
      121 ccagcacttc ccaggtcttc ggcagatcga ggatcgcctt ggcgccggcc gccaccacgg
      181 tcaccggggt ccgggccagt tcctgaagat cggccgagat gtcgaagctg gtctcggccc
      241 cgcgatgaac gccgccgatg ccgccggtgg caaaaacccg gattcccgca agcgcggcgc
      301 agatcatggt cgcggcgacg gtggtcgcgc cggtccggcc atcggccacg cagaccgcca
      361 gatcggcgcg actgagcttc atcgcccgtt cgggcggggt ccgggccagg tcctgcagcg
      421 ccgtgtcggt caggccgata tggatccgtc cgcccatgac ggcgatcgtg gcgggcgtcg
      481 cgccggcttg ccggaccacc gcttccacct gccgcgccat gtccaggttt tgcggaaagg
      541 gcatgccgtg ggtgatgatg gtcgattcca gggcgacgac gggatcgccg gcatccaggg
      601 cggcagagac ttcgggcgag aaggtcaggg gggcagtcat gatacggctt tcagatgggc
      661 ttcgacgaac agggtgcaga gggccgcgcc cgactggcgg tgtgaacgcg cgccggctga
      721 ttctgccttg gcggcatggt ggcggacggg taccggcaac ggtgtttcat ggcacgtcgc
      781 gccccgagac gtgggcggcc gatgcctcga ccgcccggcg cagcgcgtcg ccgcgtggct
      841 gggccttcaa ttcggcagcc agatgcgcgg cgaggaagca atcgcccgcg ccggtcacgc
      901 gcgccaccgt cacatgcggc ggggcgcagg tcagggtcgg tgcattggcc atcgcctcgg
      961 ccgccggatg cgcgccgtcg gtgaccagga cacgggccgc gccgcgcgcc accacggcct
     1021 cggcggcagc ggcggcatcg gggcaggatc ggccggcaag aatctcggcc tccagccggt
     1081 tcaggtagaa acaaccgcgg cgggcggcga tcagcggttc cagccgctcg gccttgccgg
     1141 gactggcggg cacgatccgc aggtcggccc ctgccagacg cggatcgcgg gcgatcgcgg
     1201 acagcagatc ctcggtcagg ttgccgtcca gaaccacggg cgccgtccag cccgccagat
     1261 cgcccgacag cggcgcaagg atcgcgccgc ccgcccgttc cagcgaatgg gcgtctgcga
     1321 tggccgcgat caggccctcg ctgtcctcga tgcccatgta gcaatccgtg ggcaggccgg
     1381 tttcgcgcga cagccagccg gtcagcacgc ccagccgctg ggcctcggcc accagcgcgc
     1441 agccctcggg gtcgcgaccg accgccgaca gcacggcggg ggccaggccc cggcgggcca
     1501 gggccaccgc cacgttcagc gccactccgc ccggcaggtg acggattcgg cccggaacgt
     1561 cggcgcccgg cgccatccgg cgtggcgcgc gcccgatcac gtcccacagc atcgcgccga
     1621 tgcacaggat gtcggggcgg tcggtcattc ttcggtccat tccttcatct cggctttcag
     1681 aaaccgttcg aaatcgtcca gatcgacggg atcgaactga ccgaaaccct gcatccagac
     1741 cgaggcgcga cgcatcccgt cgggatccag catgcaccag gtgatccggc cgcgcctctc
     1801 ctgccggatc aatccggccg ccgcaagcac cgtcagatgt ttcgagatcg ccgtaaggct
     1861 catctcgaaa ggatgcgcaa cgtcgctgac ggccatgtcg tcctcgagca gcatcgacag
     1921 gacccggcgc cgcgtcggat cggccagcgc ggcgaagatc aggttcaggc ggtcgggatc
     1981 cgggagggtc atggctttcc gggctggcaa aggtcaactg cgcggttgaa taatgtccgc
     2041 gcgcgggcgc gattgcaacc gccgcgcatc cctgcccgaa aatagaaatg tcgtttccat
     2101 acaaaccatt gcgcatcttt cccggttgct tgacttggct gccaaaccac cctagacacc
     2161 gcacggataa caagggggca gcagagatgg ccgaagggcc ccggaccggc agcgacagag
     2221 aggacgaggc ctctcgcttg cgcgatctgg aggaacggct gtcgaagctg acgcccaagc
     2281 cgaaggccga cgcgccgatg gcgggccatg accaggccca tctggcctgg cgcatggtga
     2341 tcgagatcgt ggccgggatc gggatcggct tcgggatcgg ttacgggttg gattatctgc
     2401 tcggcaccac gccgcttctg atgatcctgt tcattttcct cggcttcgcg gccggcatca
     2461 agacgatgat gcgcaccgca gccgaacttg accgcaagcc cggccccgcg ccggagaccg
     2521 agaagaggga ttgaccgtgg catccgatac ggagaaagaa accggccttg tcttccatcc
     2581 catgcagcag ttcgaggtca gtccgctttt cggcgatggc ccggtccact ggtatacgcc
     2641 caccaatgtg acgctgtgga tggcgatcgc tgtgctggcg atcaccgcgc tgatggttct
     2701 gggcacgcgc ggccgggcca tcgtgcccaa ccgcctgcaa tccgtggccg agctggccta
     2761 tggcatgatc cacaagatgg tcgaggacgt ggccggcaag gatgggctga aatatttccc
     2821 ctatatcatg acgctgttca tgttcatcgt gttcggcaac atgctgggcc ttctgcccaa
     2881 gtccttcacc gtcacctcgc atgtcgccgt caccggcgtt ctggcgctgg ccgtcttcat
     2941 cagcgtcacc accatcggtt tcctcaagaa cgggaccgcg ttcctgggcc tgttctgggt
     3001 gacatccgct ccgctggtgc tgcgccccgt cctggcgctg atcgagctga tctcgtattt
     3061 cgtccgcccc gtcagccatt ccgttcgtct cgccggaaac atgatggccg gtcacgcggt
     3121 gatcaaggtc tttgccggct tctcggccat cgccgtgatc tcgccgctgt cgatcctggc
     3181 cgtgaccgcg atgttcgggc tggaactgct ggtggccttc atccaggcct atgtcttcac
     3241 gatcctgacc tgtgtctatc tgaaggacgc gctgcacccg tcgcactagg cgccggccgg
     3301 ccgtcaggtc aatccatccg ccaattcatc acttccaacc gcaaggagat tcatcatgga
     3361 aggcaatatc gctcaactgg gtcagtatat cggtgccggt ctggccgcca tcggttcggg
     3421 cgtggccgcc gtcggtgttg gcaatgtcgc cggcaacttc ctgtccggcg ccctgcgcaa
     3481 cccgtcggct gccgccggcc agttcaccaa cgccatcgtc
//
LOCUS       DTVW01000395            2416 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1487469, whole
            genome shotgun sequence.
ACCESSION   DTVW01000395 DTVW01000000
VERSION     DTVW01000395.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2416)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2416)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2416
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1487469"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(323..1297)
                     /locus_tag="EYO87_05260"
     CDS             complement(323..1297)
                     /locus_tag="EYO87_05260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65398.1"
                     /translation="MSLVAKIASLTQRDALTRLGIALSVAWLFLIALFWVLAPGGDGA
                     AGGVGRLVAAAGAILPLALIWMAVTLARSIAILRAEAEDLRERLTQLREMAATRGAPP
                     QSRRPAATGDIASGTSVVAAPAGLPAPVSATGPATRAAGAVTTAAPPPRPADTRQAAL
                     RFDAPESVSVPPRTLIRALDFPNGPEDTEAIAALRTALKDHDNSRLLRAAQDVVTLLA
                     GQDLYMDDLQPSPPDPAVWRRFAEGARGGNAASLGGIHDQSALQIVSGILRGDEIFRD
                     AAHHFLRQFDTAISRLVPQLDDAEIEVLAQTRSARAFMLLGRVAGIFD"
     gene            complement(1303..1758)
                     /gene="greA"
                     /locus_tag="EYO87_05265"
     CDS             complement(1303..1758)
                     /gene="greA"
                     /locus_tag="EYO87_05265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_351825.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreA"
                     /protein_id="HIC65399.1"
                     /translation="MTRSGFQSLEAELTELKSKERPAIIRQIAEAREHGDLSENAEYH
                     AAREKQGFIEGRIKELESILSRSEVIDPAKLSGSVKFGATVDLIDEDTEEERTYQIVG
                     EAEADIERGLLNLRSPLARALIGKDEGDSVDVTTPGGVRSYEIVAIRFE"
     gene            2023..>2416
                     /locus_tag="EYO87_05270"
     CDS             2023..>2416
                     /locus_tag="EYO87_05270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007812433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HIC65400.1"
                     /translation="MTNDSTVERESMEYDVVIVGAGPAGLSAAIRLKQIDPELQVVVL
                     EKGSEVGAHILSGAVLDPSGLDRLIPDWRDKGAPVDTEVTDDNFYVLGEAGGIRVPNW
                     PMPPLMNNHGNYIVSMGNVCRWLAQQAEE"
BASE COUNT          393 a          802 c          825 g          396 t
ORIGIN      
        1 cacgacgatg gcggccatgg cgatcacgcc gggcagatag cgggtcatga atgatgttcc
       61 gttttacaag gttgcggaca actcggctcc gcggcgcgga acaacgcggc catacgccgg
      121 gccggcgggt gctgtcaatt cggcgcgctc gcaaccgcgg ccggtcgcca tcgcacccag
      181 ggttcgacaa actcctcgcg ctctttgcaa atacctgcgg gggtgaattg gccgcaggcc
      241 aagagggggc cggcgaggcc ccctttggtc gcgggacgca agcgcggccg actttgccgc
      301 acgcgtatgc ggccggccga tttcagtcga agatacccgc cacacgcccc agcagcatga
      361 aggcccgggc cgagcgggtc tgggccagaa cctcgatttc ggcatcatcg agctgtggca
      421 ccaggcggct gatggcggtg tcgaactggc gcaggaaatg atgcgcggcg tcgcggaaaa
      481 tctcgtctcc gcgcaggatc ccagatacga tctgcaaggc ggactggtca tggatgccac
      541 ccagggacgc ggcgttgccg ccccgcgcgc cttcggcaaa tcggcgccag acggccggat
      601 ccgggggcga cggctgcagg tcgtccatat acagatcctg tccggccagc agcgtcacca
      661 catcctgcgc cgcgcgcagc agccgtgaat tgtcgtggtc cttcagcgcc gtgcgcaggg
      721 ccgcgatggc ctcggtatcc tcgggtccgt ttggaaaatc cagcgcccgg atcagcgtcc
      781 gtggcgggac ggaaaccgat tcgggggcgt caaagcgcag cgccgcctgc cgcgtatcag
      841 cgggccgagg cggcggcgcc gcggtcgtca ccgcgcccgc ggctcttgtc gccgggccgg
      901 tcgcggaaac cggtgcgggc agcccggcgg gcgcggcaac cacgcttgtg cccgaagcga
      961 tgtcgccggt cgcggccggc cgacgcgatt gtggcggcgc gccgcgtgtc gcagccatct
     1021 cgcgcagctg ggtcagacgc tcgcgcaggt cttcggcctc ggcccgcagg atcgcgatcg
     1081 accgcgccag cgtcacggcc atccagatca gcgccagcgg caggattgcg cccgccgccg
     1141 cgaccagccg tcccacgccc ccggccgcgc catcgccgcc tggcgccagc acccagaaca
     1201 aggcaatcag gaacagccac gcgacgctca gcgcgatgcc gaggcgcgtc agggcgtccc
     1261 tctgggtcag ggatgcgatt ttggcgacca gcgacatggg acctactcga agcggatcgc
     1321 cacgatctcg tagctgcgca caccgccggg ggtggtgaca tcgacgctgt cgccctcgtc
     1381 cttgccgatc agcgcgcgcg ccagcggtga tcgcaggttc agcaggccgc gctcgatatc
     1441 ggcctcggcc tcgccgacga tctggtaggt gcgctcttcc tcggtatcct cgtcgatcag
     1501 gtccaccgtt gcgccgaact tgaccgagcc ggacagtttc gcgggatcga tcacttcgga
     1561 ccgcgacagg atcgattcca gttccttgat gcggccctcg atgaagccct gcttttcgcg
     1621 ggcggcgtga tattcggcgt tctcggacag gtcgccatgt tcgcgcgcct cggcgatctg
     1681 ccggatgatg gcgggccgtt ccttcgattt cagctctgtc agctctgctt ccagcgactg
     1741 aaagccgctg cgggtcatcg gtatcttgtc catcgctgcc caatccttcg cgggtatgcg
     1801 gttatcgcgg tcacgctaat cgaacgcccc cgccattggg gatggccggg ggcgcgtcaa
     1861 atcctgtgcg tgccgcatcg tgaacccaat tccgcgccat ttgcaagccc gccttgcgca
     1921 agggcggcgg aataaggcct ttgcgcgtgg cgtcacgatt gcccctgcgg gcctcgcgcg
     1981 ttaggtgttc tgccagccat acgcaaggaa agagcggcag ccatgacgaa tgacagcacg
     2041 gtcgaacgcg aatcgatgga atatgacgtc gtgatcgtgg gcgcgggccc ggccgggctg
     2101 tcggcggcta tccggctgaa gcagatcgac cccgaactgc aggtcgtcgt gctggaaaag
     2161 ggcagcgagg tgggcgccca tatcctgtcg ggcgcggtgc tggatccatc gggactggac
     2221 cggctgatcc ccgactggcg cgacaagggg gcgccggtcg acaccgaggt taccgatgac
     2281 aatttctacg tgctgggcga ggcgggtggg atccgggtgc cgaactggcc gatgccgccg
     2341 ctgatgaaca atcacggcaa ctacatcgtc agcatgggca atgtctgccg ctggctggcc
     2401 cagcaggccg aggaac
//
LOCUS       DTVW01000396            2792 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1487920, whole
            genome shotgun sequence.
ACCESSION   DTVW01000396 DTVW01000000
VERSION     DTVW01000396.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2792)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2792)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2792
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1487920"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..238)
                     /locus_tag="EYO87_05275"
     CDS             complement(<1..238)
                     /locus_tag="EYO87_05275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65401.1"
                     /translation="MANQNDSFIDEVTEELRRDRLFRLFRRWGWVAVVLIVALVAGVT
                     WREYAQSRDQAEARAWGDAILSAETSGDPAAIMKV"
     gene            complement(362..1372)
                     /locus_tag="EYO87_05280"
     CDS             complement(362..1372)
                     /locus_tag="EYO87_05280"
                     /inference="COORDINATES: protein motif:HMM:PF12850.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HIC65402.1"
                     /translation="MVKRRRLPDRQRPLAVGSLALAGLAGLAAYALWYEPAMCLRLVR
                     WRVALPGWHGRRPFRLVIISDLHAGAPHIGLRRVRRIVRRANALQPDLAILLGDYAAA
                     HPFTWSGTGKRDIIERLRDFTSPNGLYAVLGNHDWWQDADAQARRAGPTQAHRELARV
                     GIPCLENRAVRIGQGDEAFWLAGLGDQRPFQEGPQSDGMDDLPAALRDVTDDAPVVLL
                     AHEPDIFGLLGAADRHVALTISGHTHGGQVRIMGGAPLINASDNETWSWGRYDDDAGR
                     SLIVSGGIGCSVLPMRLGVPPELTVIDLVPPDEDASREKREARKRYEAMRRAGQLVPE
                     GG"
     gene            complement(1459..2058)
                     /locus_tag="EYO87_05285"
     CDS             complement(1459..2058)
                     /locus_tag="EYO87_05285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011048057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase"
                     /protein_id="HIC65403.1"
                     /translation="MAFTLPDLPYSHDALAGAGMSRETLEYHHDKHHNAYVEKLNELI
                     AGSEWEGKSLEEIVKGTYQKGAVAQNGIFNNASQHWNHSQFWEMMAPSSSSMPSEVEK
                     ALTDSFGSVDEFKKQFAAKGGGQFGSGWAWLVKKSDGSLDVTSTENGVNPLCFGQTAL
                     LGCDVWEHSYYIDFRNARPKYLSNFLDNLVNWENVASRM"
     gene            complement(2211..2729)
                     /locus_tag="EYO87_05290"
     CDS             complement(2211..2729)
                     /locus_tag="EYO87_05290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011746861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sarcosine oxidase subunit gamma"
                     /protein_id="HIC65404.1"
                     /translation="MAEPLANVARVDGLGMIAIRADLARSGDAIAEAAGLAIPLTTRI
                     VTDGDRALGWMSPDELLLVLPGADLASALTALRDALTGEHALVVDLSDARAVFDVTGP
                     HAGDVIAKLSPANLDAMPGDGLRRSRAAQVAAAFWRIDGGFRVIGFRSTADYLGLVLR
                     NAAIPGSGLAPR"
BASE COUNT          493 a          972 c          863 g          464 t
ORIGIN      
        1 cgaccttcat gatcgccgcc ggatcgcccg aagtctcggc cgacaggatc gcatcgcccc
       61 aggcgcgggc ctcggcctgg tcgcgcgact gcgcgtattc gcgccaggtc acgcccgcca
      121 ccagcgccac gatcaggacg acagcaaccc agccccagcg gcggaacagc cggaacagcc
      181 ggtcgcgccg caactcctcg gtcacttcgt cgatgaaact gtcattctgg ttggccatgg
      241 ccgtcttccg cgctgtcgtt cttgccgccc gtcttataac gacggcgatg ggaatgccaa
      301 tgccgggcgg gcggatcgcc gggccgcgcc agccgcaagg accggcgtcg aacaggttcg
      361 atcagccgcc ttccggcacc agctgccccg cgcggcgcat ggcctcgtag cgtttgcgtg
      421 cctctctctt ttcgcggctg gcatcctcgt ccggcggcac caggtcgatc acggtcagtt
      481 cgggcggcac acccagccgc atcggcagga ccgaacagcc gatgccgccg gacacgatca
      541 ggctgcgccc ggcatcgtcg tcatagcgtc cccagctcca ggtctcgttg tccgaggcat
      601 tgatcagcgg cgccccgccc atgatccgga cctgaccgcc atgggtatgt cccgaaatcg
      661 tcagtgcgac atggcggtcc gccgcgccca gcaatccgaa gatatccggt tcatgggcca
      721 gcaggacgac gggcgcgtcg tcggtcacat cgcgcaaggc cgccggcagg tcgtccatgc
      781 catcgctttg cggcccctcc tggaaggggc gctgatcgcc cagaccggcc agccagaacg
      841 cttcatcgcc ctgtccgatc cgcacggcgc ggttttccag acagggtatc cccacccgcg
      901 ccagttcgcg atgcgcctgg gtcggaccgg cgcggcgtgc ctgggcatcg gcatcctgcc
      961 accaatcgtg attgcccagc accgcataaa gaccgttggg agaggtgaaa tcccgcagcc
     1021 tctcgatgat gtcgcgcttg ccggtgccgc tccaggtaaa gggatgggct gcggcataat
     1081 cgcccagcag gatcgccaga tccggctgca aagcgttggc ccggcgcacg atccgacgga
     1141 cccggcgcag tccgatatgc ggcgcgcccg cgtgaagatc cgatatgatg accagccgga
     1201 acggccgccg gccgtgccag ccgggcaatg cgacccgcca ccggacaaga cgcaggcaca
     1261 tggcgggttc gtaccacagg gcataggccg ccaggcccgc cagaccggcc agagccagag
     1321 atccgacagc cagcgggcgc tggcggtccg gaaggcggcg ccgtttgacc atcctctcct
     1381 ccttgtccga atcgacagag aaaatcccgc cggatcatct ccggcgggat tttccctata
     1441 tcatcatcgt cccgccggct acatgcgcga agcgacgttt tcccagttca caagattgtc
     1501 gaggaagttc gacagatatt tcgggcgcgc attgcggaaa tcgatatagt agctgtgttc
     1561 ccacacatcg cagcccagaa gcgccgtctg tccgaagcac agcgggttga cgccgttctc
     1621 ggtcgacgtg acgtccagcg aaccgtcaga tttcttgacc agccacgccc agcccgagcc
     1681 gaattgcccg ccgcccttgg ccgcgaattg tttcttgaat tcatcgaccg agccgaagct
     1741 gtcggtcagc gccttttcca cctcggaagg catcgacgac gacgacggcg ccatcatttc
     1801 ccagaactgg ctgtgattcc aatgctggct ggcattgttg aagatgccgt tctgcgccac
     1861 ggcacccttc tgataggtgc ccttgacgat ctcctcaagc gacttgccct cccattcgga
     1921 accggcaatc agttcgttca gcttttcgac ataggcattg tggtgcttgt cgtggtggta
     1981 ttccagcgtc tctctggaca tgcccgcgcc cgccagcgcg tcgtgggaat agggaagatc
     2041 gggaagcgtg aaagccattt tcctctcctt tctgaaaggg ttgagcttgc aggtcggggc
     2101 gcaccgtccc gcattcgccg gatcaacgca aggggtgcgg gcaggttcct gcaaaggctg
     2161 agaaatgccc gcccgatcgt cgcggaaagc cggcgccgat cgacagccga tcagcgcggc
     2221 gcaagcccgc ttcccggtat ggccgcgttc cgcagcacca ggccaagata atcggcggtc
     2281 gaacgaaagc cgatgacgcg aaagccgccg tcgatgcgcc agaatgcggc ggccacctgg
     2341 gccgcccgcg accgccgcag cccgtcgccc ggcatcgcgt ccaggttggc ggggctcagc
     2401 ttggcgatca cgtcgccggc atggggcccg gtcacgtcga agaccgcgcg cgcgtcggac
     2461 agatcgacga ccaacgcgtg ttcgccggtc aacgcatccc tcagcgcggt cagggccgag
     2521 gccagatccg cgccgggcag gaccagcagc aattcgtcgg gcgacatcca gcccagggcg
     2581 cggtcgccat cggtgacgat gcgcgtggtc aagggaatcg caaggcccgc ggcctcggcg
     2641 atggcatcgc ccgaccgcgc cagatccgcg cggatggcga tcatgcccag cccgtccacg
     2701 cgggccacat tcgcaagcgg ctcagccatt cagacggctc ccttccttgt cgtaaaagac
     2761 cggctcgacg atccggccct tcatcacctc gc
//
LOCUS       DTVW01000397            1014 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1488541, whole
            genome shotgun sequence.
ACCESSION   DTVW01000397 DTVW01000000
VERSION     DTVW01000397.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1014)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1014)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1014
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1488541"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1014)
                     /gene="aceB"
                     /locus_tag="EYO87_05295"
     CDS             complement(<1..>1014)
                     /gene="aceB"
                     /locus_tag="EYO87_05295"
                     /EC_number="2.3.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012831498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="malate synthase A"
                     /protein_id="HIC65405.1"
                     /translation="NLARSPVLLIVSFLVVGGCGVDGAPGGPAVDITVDGEVIPASLF
                     DWGLYMWHNAKELSFSQRRPYFYLPKLEHWHEASWWDEVLSWGEKRLGLDHGSCRATV
                     LIETFPAAFQMNEILWALRDHSVGLNCGRWDYIFSYIKCFSADPLRITPDRDLITMEE
                     TFMSTYSSLLIDTCHQRGCHAMGGMAAQIPVRDQEENRIAMNRVRDDKIREVVTGHDG
                     TWVAHPGLVGLAMEVFDDHMPTPNQVDYRNKWCTVGDDRLTELLTQAPEVSISSRGLR
                     HNVDVGVRYLAAWLNGQGCVSLYNLMEDAATAEISRTQVWQWLHHGAEDNLDQLISVD
                     RLE"
BASE COUNT          228 a          328 c          255 g          203 t
ORIGIN      
        1 cctcaagtcg atcaactgag attagctggt ccagattgtc ctcagcacca tgatgcagcc
       61 actgccacac ttgggtgcga gagatctctg cggtggcggc atcctccatc aagttgtaca
      121 gtgacacaca gccctgccca ttcagccagg ctgccagata tctcactccc acgtccacat
      181 tatggcgcag gccgcgcgat gagatactca cttcgggcgc ttgggtcagc aactcagtca
      241 gtcgatcgtc acccaccgtg caccacttgt tacgataatc gacctggttg ggcgtgggca
      301 tgtgatcatc aaacacctcc atggctagcc cgaccaggcc cggatgggcc acccaggtcc
      361 catcatgtcc cgtgaccacc tctcggatct tgtcgtctct cactctgttc atggcgatcc
      421 tgttctcctc ctgatcgcgc acgggaatct gcgcggccat ccctcccatg gcgtgacatc
      481 ctcgttggtg acaggtgtca atcaagaggg aggaataagt gctcatgaaa gtctcctcca
      541 tggtgatcag atcgcgatca ggagtgatgc gtaggggatc cgcagagaaa cacttgatgt
      601 aactaaagat ataatcccat cgaccacaat taagtcccac agagtgatcg cggagggccc
      661 acaggatctc attcatttgg aacgccgcgg ggaatgtctc aatcaacaca gtggcgcggc
      721 agctgccatg gtccaggccc agcctcttct ccccccagct aagcacctca tcccaccagc
      781 tcgcctcatg ccagtgctct agcttgggaa gataaaaata cggtcgacgt tgggagaagg
      841 acagctcttt ggcattgtgc cacatgtaca ggccccagtc gaacaacgag gcggggatca
      901 cctctccgtc caccgtgatg tccacggccg ggccccccgg cgctccgtcc acaccacatc
      961 cccccaccac gaggaacgaa acgatcaaca acacgggcga cctggccaag ttcc
//
LOCUS       DTVW01000398            1804 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1489905, whole
            genome shotgun sequence.
ACCESSION   DTVW01000398 DTVW01000000
VERSION     DTVW01000398.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1804)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1804)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1804
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1489905"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..197)
                     /locus_tag="EYO87_05300"
     CDS             complement(<1..197)
                     /locus_tag="EYO87_05300"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009806343.1"
                     /note="catalyzes the DNA-template-directed extension of
                     the 3'-end of a DNA strand; the tau chain serves as a
                     scaffold to help in the dimerizaton of the alpha,epsilon
                     and theta core complex; the gamma chain seems to interact
                     with the delta and delta' subunits to transfer the beta
                     subunit on the DNA; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau"
                     /protein_id="HIC65406.1"
                     /translation="MTETKQAYQVLARKYRPETFADLVGQDAMVRTLRNAFAADRIAQ
                     AFIMTGIRGTGKTTTARIIAKG"
     gene            complement(255..980)
                     /locus_tag="EYO87_05305"
     CDS             complement(255..980)
                     /locus_tag="EYO87_05305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017997934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DjiA"
                     /protein_id="HIC65407.1"
                     /translation="MDTRADHPTCPDLPKPRSFWQRIGDRLAALLGSPRAVAPERSVA
                     FTIGVIALGAKLAKADGTVARSEVTAFRRVFIIPRAEEKNAARVFDLARQDVAGFDAW
                     ARRIAAMFAPGDPVLADVIEGLCIIAVADGEMHESEIAFIDEVGRIFGLTPARIATIR
                     ASHDPKAGCPPCEILGVTPDTPLPEARKRWRSLIREAHPDRAIARGLPPEAVRMAEAR
                     TRRLNEAWEKFRAMHDAPPPNAA"
     gene            complement(1039..1533)
                     /locus_tag="EYO87_05310"
     CDS             complement(1039..1533)
                     /locus_tag="EYO87_05310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020040915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase family protein"
                     /protein_id="HIC65408.1"
                     /translation="MTLREARGEDAPAVGALWNPLIRDTDVTFWPAERSEADIAAHIA
                     ERQAAGHPFLLAEEDGALLGYASYGQFRGGPGYARSMEHSVNLAAAARGRGIGRMLMQ
                     AIEDHARACGHRLMIGAITATNSGSLRFHARLGYTEWGRIPAAGWKFGRYHDLVLMGK
                     DLGG"
     gene            complement(1533..>1804)
                     /locus_tag="EYO87_05315"
     CDS             complement(1533..>1804)
                     /locus_tag="EYO87_05315"
                     /inference="COORDINATES: protein motif:HMM:PF13468.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65409.1"
                     /translation="PRGTTILAASRGRLRWRITVPDGGQMPHDGAAPMRIDWGGGPHP
                     SDTLPDHGIRLARLSLPIDLPVADPRLSRGPFSLRLATPQGEVRL"
BASE COUNT          284 a          605 c          639 g          276 t
ORIGIN      
        1 cccttggcga tgatccgggc ggtggtggtc ttgccggtcc cgcgaatgcc cgtcatgatg
       61 aaggcctgcg cgatccggtc ggcggcaaag gcgttcctca gcgtgcgcac catcgcgtcc
      121 tgaccgacca gatccgcgaa ggtttccggc cggtatttcc gggccagaac ctgatatgcc
      181 tgcttcgtct cggtcatccg ccacccgctt ctggagcgcc actctagcct cggtgcaggg
      241 gggctacaac cgcctcacgc ggcgttgggc ggcggcgcat catgcatggc gcggaacttt
      301 tcccaggcct cgttcagccg ccgggtccgg gcctcggcca tgcgcacggc ctcggggggc
      361 aggccgcggg cgatggcacg gtcgggatga gcctcgcgga tcaggctgcg ccagcgtttg
      421 cgggcttcgg gcagcggggt atccggggtc acgcccagga tttcgcaggg cggacagcca
      481 gccttcggat cgtggcttgc gcggatcgtg gcgatgcggg cgggcgtcag gccgaagatg
      541 cggccgacct cgtcgatgaa ggcgatctcg gattcgtgca tctcgccatc ggcgacggcg
      601 atgatgcaca atccctcgat cacgtcggcc aggaccggat cgccgggcgc gaacatcgcg
      661 gcgatgcgcc gcgcccaggc gtcgaagccg gccacgtcct gccgcgccag gtcgaagacg
      721 cgggcggcgt tcttttcctc ggcgcgcggt atgatgaaga cacggcggaa ggccgtcacc
      781 tcggatcggg cgacggtgcc gtcggccttg gccagcttgg cgccgagtgc gatcacgccg
      841 atggtaaagg cgaccgatcg ttccggcgcc acggcgcgcg ggctgcccag caatgccgcc
      901 agccggtcgc ctatgcgctg ccagaagctg cgcggcttcg gcaggtcggg acaggtcggg
      961 tgatcggcgc gagtatccat gccactcaga ttatccggga tcgcgccgcg agggtagggg
     1021 gcagaggtga aggaaacgtt acccgcccag atccttgccc atcaaaacca ggtcgtgata
     1081 gcggccgaat ttccagcccg cagccggaat acggccccat tcggtatagc ccagccgcgc
     1141 gtggaaacgc agcgaaccgc tgttcgtggc cgtgatcgcg ccgatcatca gccgatgacc
     1201 gcaagcgcgg gcgtgatcct cgatcgcctg catcagcatc cgcccgatgc cgcgaccgcg
     1261 cgcggcggca gccaggttga ccgaatgttc catgctgcgc gcatagcccg gcccgccgcg
     1321 aaactggcca tagctggcat agcccagcag cgccccatct tcctcggcca gcaggaaggg
     1381 atgaccggcg gcctgccgtt cggcgatatg ggcggcgata tctgcctcgc tgcgttcggc
     1441 cggccagaag gtgacatcgg tgtcgcggat cagggggttc cacagggcgc ctacggccgg
     1501 cgcatcctcg ccgcgtgcct cgcgcagcgt gatcacagcc tgacctcgcc ctggggagtg
     1561 gcgaggcgca gggagaaggg gccgcgcgac aggcgcggat cggcgacagg caagtcaatc
     1621 ggcagagaaa gccgcgccag cctgataccg tgatcgggaa gggtatccga gggatgcggc
     1681 ccgccgcccc agtcgatccg catcggcgcg gcaccgtcat gcggcatctg cccgccatcg
     1741 ggaaccgtga tccgccagcg cagcctgccg cgactggccg caaggatcgt ggtgccccgt
     1801 ggcg
//
LOCUS       DTVW01000399            1193 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1490439, whole
            genome shotgun sequence.
ACCESSION   DTVW01000399 DTVW01000000
VERSION     DTVW01000399.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1193)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1193)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1193
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1490439"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1193)
                     /locus_tag="EYO87_05320"
     CDS             complement(<1..>1193)
                     /locus_tag="EYO87_05320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006927946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HIC65410.1"
                     /translation="PIVFAITIIIVVFLPLFTLQGVEGKTFRPLAYTVALAMLGSLVF
                     ALFVAPMLSHLAMRPAKSAAQREGWVVRWLLRWYRPLVEGVVARRGRAVGLGVALLAV
                     GLVIFPRLGAEFTPELQEGTMVLRLTMAPSISLSESARLTTIVERRLMQIPEITGVVS
                     RIGRGEVGAHTDPINTAEMYVLLTPKAEWRAGNSQEELQDVIRDELGEIPGGLTNFTQ
                     PIAMAVDELLEGIRAELAVKLFGEDLDVLKQKADEIALVINGVAGAADVQVDQVSGTP
                     QLLIRVDRQAIARYGINVADVQGVIRAAVGGAKAGTVFEGVRRFDILVRYAPEYRATP
                     EAIAQILVRAPEGARVPLGQLVHITEIVGPRQITRVNSQRFVAVQCNVTGRDIVSFVE
                     EAQQA"
BASE COUNT          222 a          433 c          334 g          204 t
ORIGIN      
        1 atcgcctgct gcgcttcttc aacgaacgac acgatatcgc gtccagtgac attgcattgc
       61 accgcgacaa accgctgact gttcacccgg gtgatctggc gcggtccgac gatctctgtg
      121 atatgcacca gttgccccag gggcaccctg gccccctcgg gcgcccgcac cagaatctgg
      181 gctatggcct cgggcgtggc ccggtattcc ggcgcgtagc ggacgaggat atcgaagcgg
      241 cgtacgccct cgaagacggt cccggccttc gcgccgccga cggcggcccg gataaccccc
      301 tgcacatcgg cgacattgat cccgtagcgg gcgatcgcct gccggtcgac ccgtatcaat
      361 aactgcggcg tccccgacac ctggtccacc tgcacgtccg ccgcgccggc gaccccgttt
      421 atcaccaggg cgatctcgtc ggccttctgc tttagtacgt ccagatcttc gccgaacaat
      481 ttgaccgcca attcggccct gattccttcc aagagctcat cgacggccat ggcgatgggc
      541 tgggtgaagt tggtcaatcc ccccggaatc tcccccaatt cgtcgcgtat aacgtcctgc
      601 aactcttcct ggctattgcc tgcccgccac tccgctttgg gcgtgagcag gacatacatc
      661 tccgccgtgt tgatcgggtc ggtatgggcg ccgacttcgc cccggccgat gcgggatacc
      721 accccggtga tttcggggat ctgcatcagt cgccgttcta ctatggtcgt caaccgcgcg
      781 ctctcgctga gcgagatcga gggggccatc gtcagacgca acaccatcgt cccctcctgc
      841 agctcgggtg taaactccgc ccccagccgc ggaaaaataa caaggcccac cgccagcaag
      901 gccacgccca accccaccgc gcgtccccgc cgtgcgacga ccccttcgac cagcggccga
      961 taccaccgca acaaccaacg cacgacccag ccttcccgct gcgccgcgct cttggccgga
     1021 cgcatcgcga gatgcgacag catcggcgcg acgaatagcg cgaagaccag cgaccccagc
     1081 atcgccagcg ccacggtata ggccaacggc ctgaaggtct tgccctcgac gccctgcagc
     1141 gtgaacagcg gcaagaacac gacgatgata atggtgatgg cgaagacgat cgg
//
LOCUS       DTVW01000400            1583 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1490612, whole
            genome shotgun sequence.
ACCESSION   DTVW01000400 DTVW01000000
VERSION     DTVW01000400.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1583)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1583)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1583
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1490612"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>1583
                     /locus_tag="EYO87_05325"
     CDS             <1..>1583
                     /locus_tag="EYO87_05325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009807539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HIC65411.1"
                     /translation="LSELVADNAAKGFTAKTKVDCRLVPEDCDVTTALSLAENISQAP
                     MNAIDEFEAFARMMEIDGQTPETIAKTFGITVAAVKGRLRYGLIHPDIRAAARAKTIT
                     LDTMKAFAEHPSQEAQREVFEALTKDGGYLQAYTVRQALKTRGVQVSDDIGAFVREDY
                     EARGGAVAADLLEEHSVLEDAALVETILLEKLGAAAEEARMRLGFAWADAMVRYDYAT
                     MADYGRVYPGPIEPDEAAQKRIDEITAELEKLQLEMENEGLEDGAYNALYDRVDALEE
                     EARDLQEAYSAEDLARSGVIASWSGGQVTLHVGLVRPEDTVKEEGARGSSANPTGEEA
                     PDSGAITYPASVAEDLKTERAMALGAAMALHPEATLDLTLFKLVSDVLASGMSVTQAI
                     KIDARKEYRSHAKMDEIDETSLEQVAAAHDALDLSWLDDARAPADQFAAFRALEAGEK
                     AKLVAYATASTTQSCFARDRQRDSLMHDFEIEIMPDIRAHWTPNAALFNRFKKAWLLK
                     ILGEDMGLAQEAVTLASSS"
BASE COUNT          306 a          495 c          531 g          251 t
ORIGIN      
        1 gctgagcgag ctggtcgcag acaatgccgc caaggggttc accgcgaaga ccaaggtaga
       61 ctgccgcctt gtgccggagg actgtgacgt gaccacggcg ctgtcgctcg ccgagaacat
      121 cagccaggcg ccgatgaacg ccatcgacga gttcgaggcc ttcgcccgga tgatggagat
      181 cgatggccag acgcccgaga cgatcgccaa gacattcggc atcacggtgg cggccgtgaa
      241 aggccggttg cgctacggtc tgatccaccc cgatatccgc gccgcggccc gggccaagac
      301 gatcacgctc gacacgatga aagcctttgc cgagcaccct agtcaggagg cgcaacgcga
      361 ggtcttcgag gcgctcacga aagacggcgg ctatctgcaa gcctataccg tccgacaggc
      421 gctcaagact cgcggcgtgc aggtaagtga cgatatcggg gcttttgtgc gtgaagacta
      481 tgaggcccgc ggcggcgcgg ttgcggccga tctgctggaa gagcattccg tgctggaaga
      541 cgccgcgctg gtcgagacca tcctgctcga gaagcttggg gccgccgccg aagaggcccg
      601 tatgaggctg ggctttgcct gggccgatgc gatggtccgc tatgattacg cgaccatggc
      661 cgactatggc cgcgtctatc ccggcccgat cgagccagat gaggcggccc agaagcgcat
      721 cgacgagatc accgccgagc ttgagaaatt gcagctcgag atggagaatg aggggctcga
      781 ggacggtgcc tataatgccc tttacgaccg cgtggacgcc ttggaagagg aagcgcgcga
      841 tctgcaggag gcctacagcg ccgaggacct cgcgcggtct ggggtgatcg cgtcctggtc
      901 gggcgggcag gtgaccctcc atgttggcct cgtccgcccg gaggacaccg tcaaagagga
      961 gggcgcacgc ggctcctcgg ccaacccgac cggggaggag gccccggact ccggtgcaat
     1021 cacctatcca gcctcagtgg ccgaggatct caagaccgag cgcgccatgg cgcttggggc
     1081 cgcgatggcg ctgcatccgg aagccacgct cgatctgacg ctcttcaagc tggtcagtga
     1141 cgttctggcc agcggcatga gtgtcacgca ggcgatcaag atcgatgccc gcaaggaata
     1201 ccgcagccat gccaagatgg acgagatcga cgagacctcg ctcgagcagg tggcggcggc
     1261 gcatgatgca cttgatctct cctggctcga tgacgcccgc gcgcccgccg atcagttcgc
     1321 ggcgtttcgc gcgctggagg ccggcgagaa ggccaagctc gtggcctatg ccaccgccag
     1381 caccacgcag tcctgcttcg cgcgggaccg ccagcgcgac agcctgatgc atgacttcga
     1441 gatcgagatc atgcccgata tccgcgcgca ttggacgccg aacgcggcgc tcttcaaccg
     1501 ctttaaaaag gcctggctcc tgaagatcct cggcgaggat atgggtctgg cccaggaggc
     1561 tgtgacgcta gcctcgtcga gca
//
LOCUS       DTVW01000401            2667 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1491143, whole
            genome shotgun sequence.
ACCESSION   DTVW01000401 DTVW01000000
VERSION     DTVW01000401.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2667)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2667)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2667
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1491143"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1390)
                     /gene="cls"
                     /locus_tag="EYO87_05330"
     CDS             complement(<1..1390)
                     /gene="cls"
                     /locus_tag="EYO87_05330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010398140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cardiolipin synthase"
                     /protein_id="HIC65412.1"
                     /translation="MWASFLLVLYATITLAFIGRVLIRPRLDPSVRLAWIMVIEAVPL
                     VGIAAYLLFGEVRMNHAEVQRMADVRDRLTGLRSQTPSLLAEPPNFARPVAAANEAVG
                     GMPVLGGNRVALLEESDDAIDVLVSAIDRAQDHVHILFYIWLPDLSGRKVADAVARAA
                     RRGVACRVIVDALGSRGLVRSEAWREMSEAGAECVTAFPWGLPFVSILFRRLDLRNHR
                     KILVVDNKIAFTGSRNCADMAFAIKPRFAPWIDVLMQVEGPIVRQLQSVFLGDWMSYT
                     GRDLGDMLPVVPAAGDPGIDLQIVATGPDRRAGSISDCLSAMLHAARDRVVITTPYYV
                     PDAALDAAIRAAARRGVEVVMMLPARNDSLIVGATSEGFYYGLLAAGVKLHLFQGGLL
                     HSKIMTIDGRMAMVGSANLDRRSFELNYEVNMAIFDRGFVGRIDERQRSYAERSREIT
                     LDEVRGWGLLRRL"
     gene            1480..2424
                     /locus_tag="EYO87_05335"
     CDS             1480..2424
                     /locus_tag="EYO87_05335"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011453186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit beta"
                     /protein_id="HIC65413.1"
                     /translation="MNWISNYVRPRINSLFSRREVPENLWTKCPECGTMLFHRELGDN
                     LFVCTSCDHHMAITPRDRFGALFDGGAFVEVKVPEPTADPLQFRDQKKYPDRMRAAQK
                     ATGEKEAMLVAEGEIGRTPIVAAAQDFSFMAGSMGMYVGNAIIAAAERAVKLKRPLVL
                     FSAAGGARMQEGILSLMQMPRTTVAVEMLREARLPYVVVLTHPTTGGVTASYAMLGDV
                     QIAEPNALICFAGPRVIEQTIREKLPEGFQRAEYLLEHGMLDRVTHRKRMRDELISIL
                     RMLSGMPAPTKADLPPPAPAETPVLTASEPAGAVKSGG"
     gene            2486..>2667
                     /locus_tag="EYO87_05340"
     CDS             2486..>2667
                     /locus_tag="EYO87_05340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009503723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional folylpolyglutamate
                     synthase/dihydrofolate synthase"
                     /protein_id="HIC65414.1"
                     /translation="MNHSDAILDRLLSLHPKVIDLSLDRMWRLLAALDHPERRIPPVI
                     HIAGTNGKGSTLAMIRA"
BASE COUNT          483 a          925 c          846 g          413 t
ORIGIN      
        1 gcagccggcg cagaagtccc cagccgcgca cttcgtccag cgtgatctcg cgcgagcgtt
       61 cggcatagct tcgctggcgc tcgtcgatcc tgccgacgaa gccacggtcg aagatcgcca
      121 tgttgacctc gtaattcagt tcgaagctgc gtcggtcaag gttggcgctg ccgaccatgg
      181 ccatgcgccc gtcgatggtc atgatcttgg aatgcagaag accgccctgg aacaaatgca
      241 gcttcacgcc agctgccagc agcccgtaat agaagccttc gctggtggcg cccacgatca
      301 gggaatcgtt gcgggcgggc agcatcatca ccacctcgac gccacgccgc gccgccgccc
      361 ggatggctgc atccagcgcc gcgtcgggca cgtaataggg cgtcgtgatc accacccggt
      421 cgcgcgccgc atgaagcatc gccgacagac aatccgaaat gctgcccgcg cgccggtccg
      481 gtcccgtggc cacgatctga agatcgatgc ccggatcgcc cgcggcgggc acgaccggca
      541 gcatgtcgcc caggtcgcgg ccggtatagc tcatccagtc gcccagaaag accgactgca
      601 attgccgcac gatcggcccc tccacctgca tcagcacgtc gatccagggc gcgaagcgcg
      661 gcttgatcgc aaaggccatg tcggcgcaat tgcggctgcc ggtgaaggcg atcttgttgt
      721 ccacgaccag aatcttgcgg tgattgcgca gatccagcct gcgaaacagg atgctgacga
      781 agggcaggcc ccagggaaag gcggtgacgc attcggcccc ggcctcggac atctcgcgcc
      841 atgcctcgga ccggaccagc ccgcgcgagc ccagggcatc cacgatcacc cggcaggcga
      901 cgccgcggcg ggctgcgcgg gcaaccgcgt cggccacctt gcgcccgctg agatcgggca
      961 gccagatgta gaacaggata tggacatgat cctgcgcccg gtcgatggca gagaccagga
     1021 cgtcgatcgc gtcgtcgctt tcctccagca gcgcgacccg gttgccgccc agaaccggca
     1081 tcccgcccac cgcctcgttc gcggcggcga cggggcgggc gaaattcggc ggttcggcca
     1141 gcaggctggg cgtctggctg cgcaggcccg tcagccggtc gcgcacatcg gccatccgct
     1201 gcacctccgc gtggttcatc ctgacctcgc cgaacagcag ataggccgcg atcccgacaa
     1261 gcggaacggc ctcgatcacc atgatccatg ccagccgcac cgacgggtcc agccgcggcc
     1321 ggatcagaac ccgcccgatg aaggccaggg tgatcgtcgc atagagaaca agaaggaacg
     1381 aagcccacat gcggcgcatc attcctgccc cgccgggcaa ttgcaattcc cccccgcgcg
     1441 gcctatctgg ggcgctgaac cagccaaggt ggaccccgaa tgaactggat cagcaattac
     1501 gttcgtccgc gtatcaattc gctgttctcc cgccgcgaag tgcccgagaa cctgtggacc
     1561 aagtgccccg aatgcgggac catgctgttt caccgcgaac tcggcgacaa tctgtttgtc
     1621 tgcaccagtt gcgatcacca catggcgatc acgccccgcg accgctttgg cgcgctgttc
     1681 gacggcggcg ccttcgtcga ggtcaaggtg cccgaaccga ccgccgatcc gctgcaattc
     1741 cgcgatcaga agaaatatcc cgaccggatg cgcgcggcgc agaaggccac cggcgagaaa
     1801 gaggcgatgc tggtcgccga gggcgagatc ggccgcaccc cgatcgtggc ggcagcccag
     1861 gatttcagtt tcatggcggg gtcgatgggg atgtatgtcg gcaacgccat catcgccgcc
     1921 gccgaaaggg cggtgaagct gaaacgaccg ctggtgctgt tctcggcggc gggcggcgcg
     1981 cggatgcagg aaggcatcct gtcgctgatg cagatgccgc gcaccaccgt cgcggtggaa
     2041 atgctgcgcg aggcgcggct gccctatgtc gtggtgctga cccatccgac cacgggcggc
     2101 gtcaccgcct cctatgcgat gctgggcgat gtgcagatcg ccgaacccaa tgcgctgatc
     2161 tgctttgccg gcccgcgcgt gatcgagcag accatccgcg aaaagctgcc cgagggattc
     2221 cagcgcgccg aatatctgct ggaacacgga atgctggatc gcgtcaccca ccgcaagcgg
     2281 atgcgcgacg aactgatctc gatcctgcgg atgttgtcgg ggatgcccgc cccgaccaag
     2341 gccgatctgc cgccgcccgc cccggccgaa acgcccgtgc tgaccgcttc ggaacccgcc
     2401 ggggcggtca aatccggcgg ctgagccctt tctccgtgtc ccagtacccc gggggtccgg
     2461 gggctggccc ccggtgcgtg cgaccatgaa tcattccgac gccattctcg atcgcctcct
     2521 gtcgctgcac cccaaggtga tcgacctgtc gctggaccgg atgtggcgtc tgctcgcggc
     2581 actggatcac ccggaacgcc gcataccgcc ggtgatccac atcgccggaa ccaacggcaa
     2641 gggctcgacc ctggcgatga tccgcgc
//
LOCUS       DTVW01000402            1529 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1491502, whole
            genome shotgun sequence.
ACCESSION   DTVW01000402 DTVW01000000
VERSION     DTVW01000402.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1529)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1529)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1529
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1491502"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1253
                     /locus_tag="EYO87_05345"
     CDS             <1..1253
                     /locus_tag="EYO87_05345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013066205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HIC65415.1"
                     /translation="LAALEIVPKEELARCVALGELALDGRLVPVAGALPAAMAAAEDD
                     RALICPRDCGAEAAWVEAVPVLAPGNLREVVDHLTDRAPLARARPGLIEASPATNCLS
                     EVKGQERAKRALEIAAAGRHHLLMVGPPGAGKSMLAARLPGIMPPLCPAEALETSMIH
                     SLAGTLDNGGILRHPPFCEPHHTASMPAIVGGGRSAKPGQISLAHNGVLFMDEFPEFP
                     RPVLETLRQPIETGEIVVARANAHVRYPCRFLLVAAANPCRCGYLADAARACARVPNC
                     GADYLGKISGPLMDRFDLRLEVPAVSFLDLELPPTGDRSTDIAARVAAARQIQARRFQ
                     NHEKLRVNADASGAILDQIATPDEEGRALIVKASEKLGLTARGYHRILRTARTIADLD
                     GSADIRTPHLAEAISYRLPFVAGG"
     gene            complement(1223..>1529)
                     /locus_tag="EYO87_05350"
     CDS             complement(1223..>1529)
                     /locus_tag="EYO87_05350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019954591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65416.1"
                     /translation="GLTAREREICKRIGPILREKGLIFTGIDVIDGWLTEINVTSPTG
                     IQELERFDGINAAEAIWVAIERRWRNAEAVAGGVRASPPKVSGKSVGAQPPATKGRR"
BASE COUNT          232 a          564 c          479 g          254 t
ORIGIN      
        1 tgctggcggc gctggaaatc gtcccgaaag aggaactggc ccgctgcgtt gccctgggcg
       61 aactggcgct ggacgggcgt ctcgtgccgg tcgcgggcgc cctgcccgcc gccatggccg
      121 cggccgagga cgaccgcgcc ctgatctgtc ctcgcgattg cggcgccgag gcggcctggg
      181 tcgaggccgt gccggtcctc gcccccggca atctgcgcga ggtggtcgat cacctgaccg
      241 accgcgcgcc gctggcgcgc gcccggcccg gcctgatcga ggccagcccc gcgaccaact
      301 gcctgtccga ggtcaagggc caggaacggg ccaagcgggc gctggaaatc gccgccgccg
      361 gccgccatca cctgctgatg gtcggccctc ccggcgcggg caaatccatg ctggccgccc
      421 gcctgcccgg tatcatgccg ccgctgtgcc cggccgaggc gctggaaacc tcgatgatcc
      481 attcgctggc gggcacgctg gacaatggcg gcatcctgcg ccatccgccc ttctgcgaac
      541 cgcatcacac ggcctcgatg cccgcgattg tcggcggcgg ccgcagcgcg aagcccggcc
      601 agatcagcct tgcccataac ggcgtgctgt tcatggacga atttccggaa tttccacgac
      661 cggtcctgga aaccctgcgc cagccgatcg agaccggcga aatcgtcgtt gcccgcgcca
      721 acgcccatgt ccgctatccc tgccgtttcc tgctggtcgc ggccgccaat ccctgccgct
      781 gcggctatct ggccgatgcc gcccgcgcct gtgcgcgggt gccgaattgc ggcgccgatt
      841 atctgggaaa aatctccggc ccgctgatgg accgtttcga tctgcgactc gaggttccgg
      901 ccgtcagctt cctggatctt gaactgcccc cgaccggaga cagatcgacc gacattgctg
      961 cccgcgtggc cgccgcacgt caaatccagg cgcgtcgatt tcagaatcac gagaaattgc
     1021 gtgtgaatgc agatgcctcc ggcgcgatcc tcgaccagat cgcgacgccg gacgaggaag
     1081 gccgcgccct gatcgtcaag gcatccgaaa aactgggcct gaccgcgcgc ggctatcacc
     1141 gcatcctgcg caccgcccgc accatcgccg acctcgacgg gtcggcggat atccggactc
     1201 cgcatctggc cgaggcgatc agctatcgcc tgccctttgt cgcgggcggc tgagccccca
     1261 cgctctttcc agataccttc gggggtgagg cgcggacgcc ccctgccacg gcctcagcgt
     1321 tccgccagcg ccgctcgatc gcgacccaga tcgcctcggc ggcattgatt ccgtcgaacc
     1381 gttccagttc ctgaatgccg gtgggcgaag tcacgttgat ctcggtcagc caaccgtcga
     1441 tcacgtcgat gccggtgaag atcaacccct tttcgcgcag gatcggaccg atcctcttgc
     1501 agatctcgcg ttcccgcgcg gtcagacca
//
LOCUS       DTVW01000403            1128 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1495583, whole
            genome shotgun sequence.
ACCESSION   DTVW01000403 DTVW01000000
VERSION     DTVW01000403.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1128)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1128)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1128
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1495583"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..379
                     /locus_tag="EYO87_05355"
     CDS             <1..379
                     /locus_tag="EYO87_05355"
                     /inference="COORDINATES: protein motif:HMM:PF00676.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent dehydrogenase
                     E1 component subunit alpha"
                     /protein_id="HIC65417.1"
                     /translation="GVPAHAIDGNDIMALDALAGRLVEDMRPGGGPQFIHALTYRQRG
                     HTVADPGTWRPADERAEFMEHDPMRIARRFLIENDVAMADIDAVETAAGDEMAVVYDT
                     AKDSAWPAAELAARDVQDIGGPA"
     gene            376..>1128
                     /locus_tag="EYO87_05360"
     CDS             376..>1128
                     /locus_tag="EYO87_05360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007668951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-ketoacid dehydrogenase subunit beta"
                     /protein_id="HIC65418.1"
                     /translation="MSKMSYRDASLAALHEEMRRDPAVWALGEDIADGGVFGQYHGLI
                     EEFGASRIVSTPISESCIMGAAVGAAMVGTRPIVELRFADFALCAMDEMINQAAKARY
                     MFGGQARVPVVIRQPVGMWRSSAAQHSQSLESWYVHVPGLVVLAPGTPADNRGLLKAA
                     IRCDDPVIYMEHKDSWDMTGEVPDDDDEVTPIGVARIDRPGDDVTIVTWSGALQVARQ
                     AADAAADKGISAEIVDLRSLWPWDQDAVFGSVE"
BASE COUNT          194 a          351 c          402 g          181 t
ORIGIN      
        1 cggcgtgccg gcccatgcca tcgacggcaa cgatatcatg gcgctcgatg cactggccgg
       61 gcgattggtc gaagacatgc gccccggcgg cggcccgcaa ttcatccacg cgctgaccta
      121 ccggcagcgc ggccataccg tcgccgaccc cggcacctgg cggccggccg atgaaagggc
      181 cgaattcatg gaacatgacc cgatgcggat cgcccgccgg ttcctgatcg aaaacgatgt
      241 cgccatggcc gatatcgacg cggtggaaac cgctgccggc gacgaaatgg cggtggtcta
      301 cgacacggcc aaagacagcg cctggccggc ggccgaactt gccgcccgcg acgtgcaaga
      361 tatcggaggc ccggcatgag caagatgagc taccgcgatg cgtccttggc cgcgttgcac
      421 gaggaaatgc gccgcgaccc ggcggtctgg gcgctgggcg aggatatcgc cgatggcggc
      481 gtcttcgggc agtatcatgg cctgatcgag gagttcgggg cgtccaggat cgtcagcacg
      541 ccgatctcgg aatcctgcat catgggggcg gcggtcggcg ccgccatggt cggaacccgg
      601 cccatcgtgg aattgcgctt cgccgatttc gcgctctgcg ccatggatga gatgatcaat
      661 caggcggcca aggcgcgcta tatgttcggc ggccaggcgc gggtgccggt ggtgatccgc
      721 caaccggtcg gcatgtggcg gtcatcggcc gcgcagcatt cgcagtcgct ggaatcctgg
      781 tatgtgcatg tgccggggct ggtcgtgctg gcgcccggca cgccggccga caaccgcggt
      841 ttgctgaagg cggcgatccg ctgcgacgat ccggtgatct atatggagca caaggatagc
      901 tgggacatga cgggcgaggt tcccgacgac gacgacgaag tcacgcccat cggcgtcgcc
      961 cggatcgacc ggcccggcga cgatgtgacg atcgttacct ggtcgggcgc attacaggtc
     1021 gcgcgccagg ccgccgacgc ggcggcggat aagggaattt cggccgaaat cgtcgatctg
     1081 cgcagcctgt ggccctggga ccaggatgcg gtgttcggtt cggtggaa
//
LOCUS       DTVW01000404            1060 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1500026, whole
            genome shotgun sequence.
ACCESSION   DTVW01000404 DTVW01000000
VERSION     DTVW01000404.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1060)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1060)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1060
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1500026"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..396
                     /locus_tag="EYO87_05365"
     CDS             <1..396
                     /locus_tag="EYO87_05365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005854779.1"
                     /note="part of the aerobic respiratory chain; catalyzes
                     the ubiquinol to ubiquinone; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome bd-I ubiquinol oxidase subunit CydA"
                     /protein_id="HIC65419.1"
                     /translation="MVGLGLLFIAATGYFFIISSFRRGRYPKWALRGAVMMIPLPWVA
                     AELGWIVAEYGRQPWTVDGILPTALSVSALSATEVLLTIAGFADFYTLLFVIEVRLLL
                     KYIRLGPQEDVQITDDWRASHRARLKPAE"
     gene            401..>1060
                     /gene="cydB"
                     /locus_tag="EYO87_05370"
     CDS             401..>1060
                     /gene="cydB"
                     /locus_tag="EYO87_05370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005854777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome d ubiquinol oxidase subunit II"
                     /protein_id="HIC65420.1"
                     /translation="MILYELIPFEYLRLTWWLILGVLLIGFALTDGFDMGTGALLPFV
                     AKTDAERRVVINTIGPVWEGNQVWFILGGGAIFAAFPPLYAISFSSFYLVMFAILAAL
                     IVRPVGFKFRSKREDPKWRARWDAALCFGGAAPALLFGVAVGNVLLGIPFYLTPDLLS
                     IYDGPAFMKFFGLLRPFALLCGIVSLAMLVMHGAGWLVLKTEGAIADRARRHGVTAAK
                     VV"
BASE COUNT          142 a          348 c          350 g          220 t
ORIGIN      
        1 atggtcgggc tgggcctgct gttcatcgcc gccacgggct atttcttcat catctcctcg
       61 ttccggcgcg ggcgctatcc gaaatgggcg ctgcgcggtg cggtgatgat gatcccgctg
      121 ccctgggtgg cggcggaact gggctggatc gtggccgaat atggccgcca gccctggacc
      181 gtggacggca tcctgcccac cgccctgtcg gtcagcgccc tgtccgcgac cgaggtgctg
      241 ctgaccatcg cgggctttgc cgacttctac accctgcttt tcgtgatcga ggtcaggctg
      301 ctgctgaaat acatccgcct cgggccgcag gaggacgtgc agatcaccga tgactggcgc
      361 gcgagccatc gcgcccgcct gaaaccagcc gagtgacgcc atgatcctgt atgaactgat
      421 cccgttcgaa tatctgcgcc tgacctggtg gctgatcctg ggcgttctgc tgatcggctt
      481 cgcgctgacg gacggtttcg acatgggcac cggcgcgctg ctgcccttcg tggcgaaaac
      541 cgatgccgaa cgccgtgtcg tgatcaacac gatcggcccc gtatgggagg gaaaccaggt
      601 ctggttcatc ctcggcgggg gcgcgatctt cgcggccttt ccaccgctct acgcgatcag
      661 cttctcaagc ttctacctgg tgatgttcgc cattctcgcg gcgctgatcg tgcggcccgt
      721 gggcttcaag ttccgcagca agcgcgagga tccgaaatgg cgcgcgcgct gggacgcggc
      781 gctctgcttt ggcggcgccg ccccggcgct gctgttcggc gtcgcggtcg gcaacgtgtt
      841 gctgggcatt cccttctacc tgacccccga cctgctttcg atctatgacg gccccgcctt
      901 catgaaattc ttcggcctgc tgcgaccctt cgcgctgctg tgcgggatcg tctcgctggc
      961 gatgctggtg atgcacgggg cgggctggct ggtgctgaag accgagggcg cgatcgccga
     1021 ccgcgcccgc cgccatggcg tcacggcggc gaaggtggtg
//
LOCUS       DTVW01000405            2293 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1503609, whole
            genome shotgun sequence.
ACCESSION   DTVW01000405 DTVW01000000
VERSION     DTVW01000405.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2293)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2293)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2293
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1503609"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            204..1262
                     /gene="ribA"
                     /locus_tag="EYO87_05375"
     CDS             204..1262
                     /gene="ribA"
                     /locus_tag="EYO87_05375"
                     /EC_number="3.5.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase II"
                     /protein_id="HIC65421.1"
                     /translation="MSLIPTLAETVSRARADLRMGLPVAIGGHLAAAVETLPPQRLAD
                     MKALGRPVLAITERRAETLKARAYDGGLARVKVPDDADLAWLRGLADPADDLRMPMKG
                     PLFTERDGDATPHMAALALAKSAQLLPAVLMVRAPAPAGLTLLAPGQVLAQLAGEAAM
                     APVAAARLPLASAERSRLHIFRPDDGGAEHYAIEIGDPPRDAPVLTRLHSACFTGDVL
                     GSLKCDCGPQLRAALEAMGQAGAGVLLYLNQEGRGIGLANKMRAYDLQNQGFDTVEAN
                     HRLGFEDDERDFRIGAALLKRLGFAQARLMTNNPRKVAMLASHGIEVTQRVPLITARN
                     RFNSGYLDAKAEKSGHLL"
     gene            1259..1777
                     /locus_tag="EYO87_05380"
     CDS             1259..1777
                     /locus_tag="EYO87_05380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019297623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65422.1"
                     /translation="MSPDDLVLTARGIRFRRRLFPCAIGRTGITADKREGDGATPAGI
                     HRITGLWYRADRLAPPAPWARGIGPGDLWCDDPAHPAYNHHARAPLTAGHERLRRADP
                     LYDLVLTTDWNGPKAVPGRGSAIFLHQWRRPRYGTEGCIAFARPDLIWIAARAGPGTR
                     LIIPASSLSKYP"
     gene            complement(1787..>2293)
                     /locus_tag="EYO87_05385"
     CDS             complement(1787..>2293)
                     /locus_tag="EYO87_05385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggS family pyridoxal phosphate-dependent
                     enzyme"
                     /protein_id="HIC65423.1"
                     /translation="GENYVQEAQGKWPGWRDRFEGVSVHMIGPLQSNKAKAAVQLFDA
                     IHTLDRASLARKLATQVQQQGRSPQLFVQVNTGDEPQKAGILADELPGFLSQCRDLGL
                     NAHGLMCIPPEDQDPVPHFRLLRGLAERNGLALLSMGMSADFEAAIAEGATHVRIGSA
                     IFGARDYG"
BASE COUNT          356 a          782 c          769 g          386 t
ORIGIN      
        1 gcgcctcgcg caggtcttcc tcgtcatcga ccagcagaat ctttttcaac ccggccatgt
       61 tgcctcctgt gtgtcattgc gcaaaggagt gggcgtgccg gggcctgcgg tccagcggca
      121 tgttcgaaat ctcacatggt tttgtcggaa aaagccacta tgtttcagat tgtttcaaac
      181 tcgtctggct gccgaaagcg atcatgagcc tgattccgac cctggccgag accgtctcgc
      241 gcgcccgcgc cgacctgcgc atgggtctgc cggtcgccat cggcggccat ctggcggcgg
      301 cggtcgagac gctgccgccg cagcggctgg ccgacatgaa ggcgcttggc cgtccggttc
      361 tggcgatcac ggagcggcgg gccgaaacgc tgaaggcgcg ggcctatgat ggcgggctgg
      421 cgcgggtgaa ggtgcccgac gatgccgatc tggcctggtt gcgcggtctg gctgaccccg
      481 ccgacgatct gcggatgccg atgaaggggc cgctgttcac ggaacgcgac ggcgatgcga
      541 caccgcatat ggcggcgctg gcgctggcca aatccgcgca attgctgcct gcggtgctga
      601 tggtgcgggc gccggccccg gccgggctga cgctgctggc gccggggcag gtgctggcgc
      661 agctggccgg cgaggcggcg atggctccgg tcgcggcggc gcggctgccg ctggcctcgg
      721 cggaacgctc gcgcctgcac atcttccggc ccgacgatgg cggcgcggaa cactacgcca
      781 tcgagatcgg cgatccgccg cgcgacgcgc cggtcctgac gcggctgcat tcggcctgtt
      841 tcacgggcga tgtactgggc agcctgaaat gcgattgcgg cccgcagctt cgcgcggcgc
      901 tggaggcgat ggggcaggcc ggggcgggtg tactgctgta tctcaaccag gaagggcggg
      961 ggatcgggct ggccaacaag atgcgcgcct atgacctgca aaaccagggt ttcgacacgg
     1021 tcgaggccaa tcaccggctg ggtttcgagg atgacgaacg cgatttccgc atcggcgcgg
     1081 cgctgttgaa acggctgggc ttcgcacagg cgcggctgat gaccaacaat ccccgcaagg
     1141 tcgccatgct ggcaagccac ggaatcgagg tgacgcagcg cgtgccgctg atcaccgcgc
     1201 gcaaccggtt caacagcggc tatctggatg ccaaggcgga aaaatccgga catctgctgt
     1261 gagcccggac gatctggtcc tgaccgcccg gggcatccgc tttcgccgcc gtctctttcc
     1321 ctgcgccatc ggcaggaccg gaattaccgc tgacaagcgc gaaggcgacg gcgcgactcc
     1381 ggccggcatc catcgcatca ccgggctgtg gtatcgcgcc gaccgcctgg cgcctccggc
     1441 cccttgggcg cgcggcatcg gtcccggcga tctgtggtgc gatgatccgg cccatccggc
     1501 ctacaaccac catgcccgcg ccccgctgac cgccggccat gaaagactgc gccgcgccga
     1561 tccgctttac gatctggtcc tgaccaccga ctggaacggg cccaaagccg tgcccggacg
     1621 cggatcggcc atcttcctgc atcaatggcg ccgcccccga tacggcaccg agggctgcat
     1681 cgccttcgcc cgcccggacc tgatctggat cgccgcgcgg gccgggccgg ggacgcgctt
     1741 gatcattccg gcttcttcgt tgtccaaata cccctagcgc aacggtctag ccgtaatccc
     1801 gcgcgccgaa gatggccgag ccgatgcgca catgggtcgc gccctccgca atcgcagcct
     1861 cgaaatcggc gctcatcccc atcgacagca gggcgaggcc atttctctcg gccagtcccc
     1921 gcagcagccg gaaatgcggc accggatcct ggtcctcggg cgggatgcac atcagcccat
     1981 gggcgttcag gcccagatcg cggcactggc tcaggaaacc cggcagttcg tcggccagga
     2041 taccggcctt ctggggctcg tcaccggtat tgacctgcac gaacaattgc gggctgcggc
     2101 cctgttgctg aacctgcgtg gccagcttgc gcgccaggct ggcgcggtcc agcgtgtgga
     2161 tggcgtcgaa cagctgcacc gccgccttgg ccttgttcga ttgcagcgga ccgatcatgt
     2221 ggaccgagac cccctcgaag cgatcccgcc agccgggcca tttgccctgc gcctcctgca
     2281 cgtaattttc gcc
//
LOCUS       DTVW01000406            1028 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1504353, whole
            genome shotgun sequence.
ACCESSION   DTVW01000406 DTVW01000000
VERSION     DTVW01000406.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1028)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1028)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1028
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1504353"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..216)
                     /locus_tag="EYO87_05390"
     CDS             complement(<1..216)
                     /locus_tag="EYO87_05390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_354018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-
                     methylthiotransferase MtaB"
                     /protein_id="HIC65424.1"
                     /translation="MTAPIFSTLGCRLNAYETEAMREMAEAAGLPHAVVINTCAVTAE
                     AVRKARQEIRRLSRENPGAPVIVTGCAA"
     gene            complement(213..1010)
                     /locus_tag="EYO87_05395"
     CDS             complement(213..1010)
                     /locus_tag="EYO87_05395"
                     /EC_number="5.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate epimerase"
                     /protein_id="HIC65425.1"
                     /translation="MKMHGLGNDFVVIDLRAGGQPPAPEVIARIADRHRGVGFDQLAV
                     IEADPEADLRLRFWNADGTSSAACGNATRCIARFVMDQTGRDRLSLRTDHAVLLAEDA
                     GAGLTRVNMGQPVLDWRAIPLAREVDIDHLPIEGDPVATGMGNPHLTFFVAEAAAVDL
                     DRFGPDMEHHPLYPERTNVEVVQVLSPDEILLRIWERGTGATLASGSCSCAAAVAAAR
                     RGLTGRRVTVTVPGGVLMIDWREDGVWMEGPTAHVFSGMLTPEWLAQ"
BASE COUNT          166 a          387 c          330 g          145 t
ORIGIN      
        1 cgcggcgcag ccggtcacga tcaccggggc gccgggattt tcgcgcgaca gccgccggat
       61 ttcctgccgc gccttgcgca ccgcctcggc ggtgaccgca caggtattga tcacgacggc
      121 atggggcagg cccgcggcct cggccatttc gcgcatcgcc tcggtttcgt aggcattcag
      181 ccggcagccg agggtcgaga agatcggcgc agtcattgcg ccagccattc gggcgtcagc
      241 attccggaaa agacatgcgc cgtcggacct tccatccaga cgccatcctc gcgccagtcg
      301 atcatcagca ccccgcccgg cacggtcacc gtcacgcgcc gcccggtcag cccgcgccgc
      361 gccgcagcca cggcagccgc gcaggaacac gaccccgagg ccagcgtcgc cccggtgccg
      421 cgttcccaga tccgcagcag gatttcgtcg ggcgacagaa cctgcaccac ctcgacattg
      481 gtgcgttcgg gatacagcgg gtgatgctcc atgtccgggc cgaaccggtc cagatcaacc
      541 gctgccgcct ccgcgacgaa gaaggtcaga tgcgggttgc ccatgcccgt ggccaccgga
      601 tcgccctcga tcggcagatg gtcgatatcg acctcgcggg ccagcggaat ggcacgccag
      661 tccagcaccg gctgccccat gttcacccga gtcagcccgg cccccgcatc ctcggccagc
      721 aggacggcgt gatcggttcg caggctcagc cggtcccgcc cggtctggtc catgacgaac
      781 cgcgcgatgc agcgggtggc gttgccgcag gcggcgctgg aggtgccatc ggcgttccag
      841 aaccgcagcc gcagatccgc ctcgggatcc gcctcgatca ccgcaagctg gtcgaacccc
      901 acgccgcggt ggcggtctgc gatgcgcgcg atcacctccg gcgccggcgg ctggccgccc
      961 gcgcgcagat cgatcaccac gaaatcgttg cccagcccgt gcatcttcag gaaagccaga
     1021 ccggaggc
//
LOCUS       DTVW01000407            2240 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1504467, whole
            genome shotgun sequence.
ACCESSION   DTVW01000407 DTVW01000000
VERSION     DTVW01000407.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2240)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2240)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2240
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1504467"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            75..209
                     /locus_tag="EYO87_05400"
                     /pseudo
     CDS             75..209
                     /locus_tag="EYO87_05400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013067882.1"
                     /note="catalyzes the formation of methionine from
                     L-homocysteine and S-adenosyl-L-methionine; incomplete;
                     partial in the middle of a contig; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="methionine synthase"
     gene            complement(206..1396)
                     /locus_tag="EYO87_05405"
     CDS             complement(206..1396)
                     /locus_tag="EYO87_05405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011746639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HIC65426.1"
                     /translation="MRPFLDNQTARRLFLDRHLLLRPASGPGQGADLQSVLDDLGFVQ
                     VDSVNTLARAHDLILWSRRGQYRPRGLSRLVSHRRSAFEHWTHDASVIPMQFYPMWRL
                     KFARDEARMRLRWPGWRGKGWDAEIDGVLQQVADHGPASSLEVGGGDKKASSGWWEWH
                     PSKTALEFLWRSGRLAICHRAGFRKYYDLAQRVIPAEHLNRRLDDAEIVDWALSRALS
                     RLGFASSGELAAFFAIATPAEAKSWCAGALARGRIIEVDVEMADGSRRRSLTSPAMLD
                     AARSLPEPSNRVRLLSPFDPALRDRTRAERLFGFHYRIEIFVPETQRRFGYYVFPVMQ
                     GDRLIGRLDAKREGRTLAVRAFWPETGVRMGKARMAGLSAELDRVRHLAAADEVTFAA
                     NWLR"
     gene            complement(1424..>2240)
                     /locus_tag="EYO87_05410"
     CDS             complement(1424..>2240)
                     /locus_tag="EYO87_05410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018001283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HIC65427.1"
                     /translation="PSHAYLGLSPGLDFETRITAKPDAARLLERELARPSYRPAPIAL
                     GTNTDPYQPIEAKLAIMPGILRVLRDWNHPATLVTRGQTVLRDLDLWAEMAARDQAAV
                     GISITTLQQDLARAMEPRAPAPATRLRMIRELSRAGVPVRVMVAPVIPVLTEPEIEAI
                     LTAAREAGATTASMIPLRLPYEVAPLFRDWLERHRPGMAAHIMNRVQAMRGGRDNDPR
                     FGHRFKGEGVEAQLALQRFRLARKRLGYREGSPPLDCSRFGPPPRAGDQLSLF"
BASE COUNT          374 a          787 c          750 g          329 t
ORIGIN      
        1 ctgccaccac cctcacctac ttgtgcccag gcgtcggtaa ttaaaaatct catcattttg
       61 gaaccggtaa ctatatggaa acccgcccgc gcggcgatcg cccctcgctg gaaaccattg
      121 cgtcacagct gggcgggttc agttcgtcca gcgacggcac gggcgagggc ggtcccgtgc
      181 gcgagcggcg cggccgccgg cgcggctagc gcagccagtt cgcggcaaaa gtcacctcat
      241 ctgccgcagc cagatgccgg acccggtcca gttccgccga cagcccggcc atgcgtgcct
      301 tgcccatccg caccccggtt tcgggccaga aggcgcgaac cgccagcgtc ctgccctcgc
      361 gtttcgcatc cagccgcccg atcaggcgat caccctgcat gaccggaaag acgtaatagc
      421 cgaatcgccg ctgcgtttcg ggcacgaaga tctcgatccg gtagtggaaa ccgaacagcc
      481 tctcggcgcg ggtccggtcg cgcagggccg gatcgaaggg cgacagcagc cgcacgcgat
      541 tggacggctc gggcagcgac cgggccgcgt ccagcattgc cggcgacgtc agactgcggc
      601 ggcgcgaccc atcggccatt tccacatcaa cctcgatgat gcggccccgc gccagcgccc
      661 cggcgcacca tgatttcgcc tcggcggggg tggcaatggc aaagaaggcg gccagttcgc
      721 cgctgctggc aaagcccagc cgcgacagcg cccgagacag ggcccaatcg acgatctcgg
      781 catcatcgag ccgccggttc agatgctcgg ccgggataac ccgctgggcc aggtcgtaat
      841 acttgcgaaa gcccgcgcgg tggcagattg ccagccgacc cgaccgccac aggaattcca
      901 gcgcggtctt cgagggatgc cattcccacc agcctgacga ggctttcttg tcgccgccgc
      961 ccacctccag ggacgaggcc ggcccatgat cggccacctg ttgcagaacc ccgtcaatct
     1021 cggcgtccca acccttgccg cgccaccccg gccagcgcag gcgcatccgc gcctcgtcgc
     1081 gcgcgaattt cagccgccac atcgggtaga actgcatcgg gatgaccgag gcgtcatggg
     1141 tccagtgttc gaatgccgag cggcggtgcg agaccaggcg cgacaggccc cgcggccggt
     1201 attgcccgcg ccgggaccac aggatcaggt catgggcgcg ggccagggtg ttgacgctgt
     1261 ccacctgcac gaagcccaga tcgtccagca ccgattgcag atcggcgccc tggccggggc
     1321 cggatgccgg gcgcagcagc agatgccggt ccagaaacag gcggcgggcg gtctgattgt
     1381 ccagaaacgg gcgcatcggg tcactctggc gcgatcgcgc gcgtcagaac agggacaatt
     1441 gatcgcccgc acgcggcggc ggcccgaagc gcgaacaatc cagcggcggg ctgccctcgc
     1501 gatagcccag tcgcttgcgc gccaggcgaa agcgttgcaa ggccagttgc gcctcgaccc
     1561 cctcgccctt gaagcggtga ccgaagcgcg gatcgttgtc gcgtccgccc cgcatcgcct
     1621 ggacccggtt catgatatgg gcggccatgc cgggacggtg acgttccagc cagtcgcgga
     1681 acagcggcgc gacctcgtag ggcaggcgca gcgggatcat gctggcggtg gtcgcgccgg
     1741 cctcgcgcgc ggccgtcagg atcgcctcga tctcgggttc ggtcaggacc gggatcacgg
     1801 gcgcgaccat gacccgcacc ggcacgcccg cccgcgacaa ttcgcggatc atccgcaacc
     1861 gggtcgcggg tgcgggcgcg cgcggctcca tcgcgcgggc cagatcctgc tgcagcgtgg
     1921 tgatgctgat gccgacggcc gcctgatccc tggccgccat ctcggcccac aagtccaggt
     1981 cgcgcaggac ggtctggccg cgcgtcacca gtgtcgccgg atgattccag tcccgcagca
     2041 cccgcaggat accgggcatg atcgccagct tcgcctcgat cggctgatag ggatcggtat
     2101 tggtgccaag cgcgatcggt gcgggcctgt aggatgggcg ggccagttcg cgttccagca
     2161 gccgcgcggc atcgggcttg gcggtgatcc tggtttcgaa atccagtccg ggcgacaggc
     2221 ccagataggc gtggctcggc
//
LOCUS       DTVW01000408            2033 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1505467, whole
            genome shotgun sequence.
ACCESSION   DTVW01000408 DTVW01000000
VERSION     DTVW01000408.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2033)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2033)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2033
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1505467"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..156)
                     /locus_tag="EYO87_05415"
     CDS             complement(<1..156)
                     /locus_tag="EYO87_05415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_351573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HslU--HslV peptidase proteolytic subunit"
                     /protein_id="HIC65428.1"
                     /translation="MADETFPGWHGTTILAVRRGGRVVVAGDGQVSVGQTVMKGSARK
                     VRRLAPGG"
     gene            complement(499..1287)
                     /locus_tag="EYO87_05420"
     CDS             complement(499..1287)
                     /locus_tag="EYO87_05420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018000298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HIC65429.1"
                     /translation="MKLNHVSIGPEGGLPILLVHGLFGQGRNLGALARRLAESRRVVT
                     ADLRNHGDSPQDPDHSYAAMAGDLAELIGILGGRADLVGHSMGGKASMALALTRPRMV
                     RKLAVMDIAPIAYRHDQSHHIDAMESLDLRNLRRRSDADRLLAALVDEPGTRAFLLQS
                     LDLKADPPAWRLNLPALRAAMADLVGWPEDLPQGTFDGPVLEIAGARSDYLSKAGQKA
                     LRASFPQARVVKVKDAGHWLHADAPDAVAAILSQFLGAAEISET"
     gene            1342..1740
                     /locus_tag="EYO87_05425"
     CDS             1342..1740
                     /locus_tag="EYO87_05425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018000297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65430.1"
                     /translation="MARDAQSFEEIGDMAAEVSHMIAARFGGARRGERPPLRIMLRRR
                     GGALPRRLRKAGARLARAETLARQPKVARQMDLAGLSRDRDLLIAHLQPLGQFNRWQG
                     RAISFAASVAFGLLVLGAAIVWLLVWRGRL"
     gene            1835..>2033
                     /locus_tag="EYO87_05430"
     CDS             1835..>2033
                     /locus_tag="EYO87_05430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011749879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HIC65431.1"
                     /translation="MPENREFRNAILALAIGAFAIGTSEFAAMGLLPYFAADLGITDP
                     QAGHVISAYALGVVIGAPLTSI"
BASE COUNT          301 a          716 c          671 g          345 t
ORIGIN      
        1 cccgcccggc gccagccgcc gcaccttgcg cgcgctgcct ttcatcaccg tctggcccac
       61 gctgacctga ccgtcgcccg cgaccacgac cctgccgccg cgccgcaccg caaggatggt
      121 ggtgccgtgc cagccgggaa atgtctcatc cgccatcgga agtctccgtc ttctgtccgg
      181 acccagatat gaaggcgccc cgatgactgc aagccgttcc atcccgtgca gggctctggc
      241 aggctgctgc gcgggtctgc gggcagggtg gtttttcgcg ccggcgccgg ccggatccac
      301 attctcaggg gcgacggcgg atccgggctt ccagtgtgcg gccgagccgg aaacctggcg
      361 tcaatctaaa ccgccttggc cctgggtgcc cgttcagaga tctccaggcc accgaggttc
      421 ttgccccgcg ccgtgacccg cgcgacgaca acggtcgcga atccctccaa ctcgccggaa
      481 tccgcgtcgg tgtgcggatt atgtctcgga gatctcggcc gctcccagaa actgggacag
      541 gatcgctgcc accgcatcgg gcgcgtcggc gtgcagccaa tggcctgcgt ccttgacctt
      601 gaccacgcgg gcctggggaa agctggcgcg cagcgccttc tgccccgcct tgctgaggta
      661 atccgaccgc gcccccgcga tttcgaggac cggcccgtcg aaggtcccct gcggcaggtc
      721 ctccggccag cccaccaggt cggccatcgc cgcgcgcagc gcaggcaggt tcagccgcca
      781 tgccggcgga tcggccttca gatccagcga ttgcagcaga aaggcgcggg tgcccggctc
      841 gtctaccagc gcggccagaa gccggtcggc gtcgctgcgg cgtctcagat tgcgcaggtc
      901 cagggattcc atggcgtcga tatggtggct ctggtcgtgg cgataggcga tgggagcgat
      961 gtccatcacc gccagcttgc gcaccatccg cggccgcgtc agcgccagcg ccatcgacgc
     1021 cttgccgccc atcgaatgac cgaccagatc ggcgcgcccg ccgagaattc cgatcagctc
     1081 cgccagatcg cctgccatcg ccgcatagct gtgatcggga tcttgcgggc tgtcgccgtg
     1141 attgcgcagg tccgccgtca ccacccgtcg cgattcggcc agccgccggg ccagagcgcc
     1201 cagattgcgg ccctgaccaa acaggccgtg aaccagaagg atgggaagcc cgccttcggg
     1261 cccgatcgag acgtgattca gcttcatgtc ggcagcctac ggcgtctggc gcccgcccgc
     1321 catcccgcgt agcctgtggc catggcacgg gatgcgcaga gtttcgaaga gatcggcgac
     1381 atggctgcag aggtttcgca catgatcgcg gcccggttcg gtggcgccag gcggggcgaa
     1441 cggccaccgc tgcggatcat gctgcgccgc cgcggcggcg ccctgccgcg aaggctgcgc
     1501 aaggccggcg cccggctggc gcgcgccgaa acgctggcgc gtcagcccaa ggtcgcccgg
     1561 cagatggatc tggccgggct cagccgcgac cgcgacttgt tgatcgccca cttgcagcct
     1621 ctgggccagt tcaaccgttg gcagggccgc gcgatcagct ttgcggcctc ggtcgccttc
     1681 ggactgctgg ttctgggcgc ggcgatcgtc tggcttctgg tgtggcgcgg caggctttag
     1741 ccttgcacat cgtgcaaccc ggcttgcagg aacagggggt tgtcaatgct gcgccgcagc
     1801 atgatcttgg ctccgacatg tgcgagagac aatgatgccc gagaaccgag aattccggaa
     1861 cgcgattctg gcgctggcca tcggcgcctt tgccatcggc acgtccgaat tcgccgcgat
     1921 ggggcttttg ccctatttcg ctgccgatct gggcattacc gacccgcagg cgggccatgt
     1981 catcagcgcc tatgcgcttg gcgtcgtgat cggcgcgccg ctgacctcga tca
//
LOCUS       DTVW01000409            2057 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1505665, whole
            genome shotgun sequence.
ACCESSION   DTVW01000409 DTVW01000000
VERSION     DTVW01000409.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2057)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2057)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2057
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1505665"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            195..>2057
                     /gene="bamA"
                     /locus_tag="EYO87_05435"
     CDS             195..>2057
                     /gene="bamA"
                     /locus_tag="EYO87_05435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010396730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamA"
                     /protein_id="HIC65432.1"
                     /translation="MTRKLGKGAVALVTALTIATPAALVPNAAVAYVFNDVRIQGTQR
                     IEPATVLSYANVARGQNVSAGELNDALQRLQNSGLFETVEIVPQGGTLIITVSEYPTI
                     NQISFEGNRRLKDDELAQIAQSQSRRVYQPSQAIQDAQNIAQAYASRGRLAARVDPRI
                     IRRSGNRVDLVFEIREGDVTEIERISFTGNRAFSDRRLRQVLETKQAGILRTFIRADT
                     FAPERIPLDEQLLTDFYRSRGYADFKVQGVAPEIARERDAFYITFNIQEGPRYRFRNV
                     STISEIAGVDAAPFAAQNRVGGGDVYNPAAIDNTIRRMETVAIQQGLNFVNIEPRVTR
                     NPQTQTLDLTFALTRGPRIFVERIDIEGNTTTLDRVIRRQFTTVEGDPFNPREIRNAA
                     ERIRALGYFSDAQVNSRQGSSAEQVIVDVNVEEQPTGSLSFGASYGVNSGFGLNASLN
                     ETNFLGRGQTLGLTISTASGDREGLINFVEPYFLGRDLKFGFTARYNETSNLNSDYDT
                     RTISVQPSIEFPISANGRLELRYRLEQNRLNNVSDDSSVILQDEQGTRLSSAAGYTYL
                     WDTRVAGLDPLTSYKLRFSQDFAGLGGDVKTVTSTALAGVESNAWREDVTLRAEI"
BASE COUNT          408 a          655 c          635 g          359 t
ORIGIN      
        1 cgggcatggc ggcggtgctg gcgctgatga ttttcggcct cacgaacgat cttttctgcc
       61 cctagggcgc gatgcgcttt tgacagggcc gggcgtttcg ggcacaagat ttggccaaga
      121 gggcgtgaaa acacgcaaca gaaagaaggc gccagaaaag gcgcgtccgc aggctggaac
      181 atagaggggc ggcaatgaca cggaaactgg gcaagggcgc ggttgcgctg gtcacggcct
      241 tgacgatcgc gacaccggcg gcactggtgc ccaatgcggc tgtggcctat gtcttcaacg
      301 acgtgcgaat tcagggcacg cagcggatcg aaccggccac ggtcctgtcc tatgccaatg
      361 tcgcgcgcgg ccagaacgtc tcggccggcg agttgaacga tgcgctgcaa cggttgcaga
      421 attccggtct gttcgagacg gtcgagatcg ttccgcaggg cggcaccctg atcatcaccg
      481 tttcggaata tccgacaatc aaccagatca gcttcgaggg caaccgccgc ctcaaggatg
      541 acgaactggc ccagatcgcg caaagccagt cgcgccgggt ctatcagccc agccaggcca
      601 tccaggacgc gcagaacatc gcgcaggcct atgccagccg gggccgtctg gctgcccgcg
      661 tcgatccgcg catcatccgg cgcagcggca accgcgtcga tctggtcttc gagatccgcg
      721 aaggcgacgt caccgagatc gagcgcatca gctttaccgg caatcgcgcc ttttcggacc
      781 gtcgcttgcg gcaggtgctg gaaaccaagc aggcgggtat cctgcgcacc ttcatccgcg
      841 ccgatacctt cgcgccggaa cggattccgc tggacgaaca gcttctgacc gatttctacc
      901 gctcgcgcgg ttatgccgat ttcaaggtgc agggcgtcgc gccggaaatc gcccgcgaac
      961 gcgatgcctt ctacatcacc ttcaacatcc aggaaggccc gcgctaccgg ttccgcaacg
     1021 taagcacgat ctccgagatc gcaggcgttg atgccgcacc ctttgcggcg cagaaccgtg
     1081 tcggcggcgg cgatgtctac aaccccgccg ccatcgacaa caccatccgg cggatggaaa
     1141 cggtggcgat ccagcagggg ctgaacttcg tcaatatcga gccgcgggtg acgcgcaatc
     1201 cgcagacgca gacgctggat ctgacctttg cgctgacgcg cggcccgcgc atcttcgtgg
     1261 aacgcatcga catcgagggc aacacgacca cgctggaccg ggtgatccgg cggcaattca
     1321 ccacggtcga gggcgatccg ttcaacccgc gcgagatccg caatgccgcc gaacgcatcc
     1381 gcgcgcttgg ctatttctcg gatgcgcagg tcaacagccg gcagggcagc agcgccgaac
     1441 aggtgatcgt ggatgtgaat gtcgaggaac agcccactgg ctctctgtcc ttcggcgcat
     1501 cctacggtgt caattccggc ttcggcctca acgcctcgct gaacgagacc aacttcctgg
     1561 gtcgcgggca gacgctgggc ctgaccattt ccaccgcgtc gggcgaccgc gagggtctga
     1621 tcaacttcgt cgaaccctat ttcctgggtc gcgatctgaa attcggcttc accgcgcgct
     1681 ataacgaaac cagcaacctg aattcggact acgacacccg cacgatctcg gtccagccgt
     1741 cgatcgagtt tccgatttcg gccaatggcc ggctggaact gcggtatcga ctggaacaga
     1801 accgtctgaa caatgtcagc gacgacagtt ccgtcattct tcaggacgaa cagggcacgc
     1861 gtctgagttc agcggcgggc tacacctacc tgtgggatac gcgggtggcc ggtcttgatc
     1921 ccctgacaag ctacaagctt cggttctcgc aggatttcgc ggggctgggc ggcgacgtga
     1981 agacggtcac cagcaccgcg ctggccggtg tggaaagcaa tgcctggcgc gaggatgtca
     2041 ccctccgcgc cgagatc
//
LOCUS       DTVW01000410            1500 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1506309, whole
            genome shotgun sequence.
ACCESSION   DTVW01000410 DTVW01000000
VERSION     DTVW01000410.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1500)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1500)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1500
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1506309"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..605
                     /locus_tag="EYO87_05440"
     CDS             <1..605
                     /locus_tag="EYO87_05440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009178341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HIC65433.1"
                     /translation="PLSSSTRFYSAETPDISYDPEKARQLLEESSYDGETIRLLGLPY
                     GETWQRWAEAVKQNLTEIGMNVEIVPSDVAGWNQKVSDRDFDLAFTYLYQYGDPALGV
                     SRTYMSTNAEPGSPWNNVADYQNPEVDKLFEEAALMADPEERRAAYKKVQDMIVSDVP
                     NLWLLELGFPTIYRCNIKNPVNTALGVNDGFRDVWIDKAQ"
     gene            681..>1500
                     /locus_tag="EYO87_05445"
     CDS             681..>1500
                     /locus_tag="EYO87_05445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009178428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HIC65434.1"
                     /translation="MIRFILGRLVKAVFILLAILIVNFLLIHAAPGDPAAVMAGEAGA
                     ADEKFLADLRTRFGLDQPLYVQLWTYLKGAAQLDLGFSYRQQMPVADLIADRLPATLL
                     LTGVAFVLSLVLGVIAGVAASARQGSWSDTIISTLALLFYATPLFWVALMAVLVFSVW
                     LEWLPGFGYSTIGAGYTGLAHVLDVARHLVLPASTLGLFFMAIYMRMTRASMLEVSRL
                     DFVKTARAKGLKHRVIQRRHILRNALLPVITLAGLQAGQIFGGAILTETVFAWPG"
BASE COUNT          260 a          473 c          473 g          294 t
ORIGIN      
        1 gtccgctgtc gtcctcgacc cggttctatt ccgccgagac cccggacatt tcctatgacc
       61 ccgagaaagc cagacagctt ctggaggaat cgagctatga cggcgagacc atccgtctgc
      121 tgggtcttcc ctatggcgag acctggcaac gctgggccga agcggtcaag cagaacctga
      181 cagagatcgg catgaatgtg gaaatcgtgc cctccgacgt ggccggatgg aaccagaagg
      241 tcagcgatcg cgacttcgac ctcgccttta cctatctcta tcagtatggc gatccggccc
      301 tgggcgtgtc gcggacctac atgagcacca atgccgagcc cggttcgccc tggaacaacg
      361 tggccgatta ccagaacccg gaggtcgaca agctgttcga ggaggcggcc ctgatggccg
      421 accccgaaga gcggcgcgca gcctacaaga aggtccagga catgatcgtc agcgacgttc
      481 cgaatctgtg gctgctggaa ctgggcttcc cgacgatcta tcgctgcaac atcaagaacc
      541 cggtcaacac cgccctgggc gtgaatgacg gattccgcga tgtctggatc gacaaggcgc
      601 aatagggaca ccggtcccgc cgtccgggcc aaggctttgg cccggactga acgcatcaca
      661 cggacggcaa ggcaggcagc gtgataaggt tcatcctcgg caggctggtc aaggcagtgt
      721 tcatcctgct ggccatcctg atagtcaact tccttctgat ccacgccgcc cccggcgatc
      781 ccgctgcggt catggccggc gaggcgggcg cggcggacga gaaattcctt gccgatctgc
      841 ggacgcgctt cgggctggat cagccacttt atgtccagct ctggacctat ctgaaggggg
      901 cggcacagct tgatctgggc ttttcctatc ggcagcagat gccggtggcc gacctgatcg
      961 ccgaccgcct gcctgcgacc ctgctgctga ccggcgtcgc cttcgtgctg tcgctggtgc
     1021 tgggggtgat cgcgggtgtc gcggcctcgg cccggcaggg atcgtggagc gacacgatca
     1081 tttccacgct ggcgctgctt ttctacgcca cgcccctgtt ctgggtggcg ctgatggcgg
     1141 tgctggtgtt ttcggtctgg ctggaatggc tgccgggctt tggctattcg accatcggcg
     1201 ccggatatac cggacttgcc catgtgctgg atgtggccag gcatctggtc ctgccggcca
     1261 gcacgctggg gctgttcttc atggccatct acatgcgcat gacccgcgcc tccatgctgg
     1321 aggtcagccg gctggatttc gtcaagaccg cccgtgccaa gggactgaaa caccgggtga
     1381 tccagcgccg gcatatcctt cgcaacgccc ttttgccggt aatcacgctg gccgggcttc
     1441 aggcgggaca gatcttcggc ggggcgatcc tgaccgaaac ggtcttcgcc tggcccggca
//
LOCUS       DTVW01000411            1661 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1506866, whole
            genome shotgun sequence.
ACCESSION   DTVW01000411 DTVW01000000
VERSION     DTVW01000411.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1661)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1661)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1661
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1506866"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..356
                     /locus_tag="EYO87_05450"
     CDS             <1..356
                     /locus_tag="EYO87_05450"
                     /inference="COORDINATES: protein motif:HMM:PF06532.9"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF1109 family protein"
                     /protein_id="HIC65435.1"
                     /translation="LVAAAAMLWLVLAIKATPAGMVWPRIKGNSAMMCFFAIMLVSAL
                     PLAAGLRVLGGGASPAPMLSGAALGLAVGSLAATLYAFFCTQDSPLFFLTWYGLAIAV
                     VTLAGAVAGRGMLRW"
     gene            483..680
                     /locus_tag="EYO87_05455"
     CDS             483..680
                     /locus_tag="EYO87_05455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010395222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65436.1"
                     /translation="MARRVCPMPLPQFLLMILTVLLAAALSLLAAIALDLPGVALIFA
                     VLTGAALIHFGHRDGRDNHDG"
     gene            655..1284
                     /locus_tag="EYO87_05460"
     CDS             655..1284
                     /locus_tag="EYO87_05460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008032526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1638 domain-containing protein"
                     /protein_id="HIC65437.1"
                     /translation="MAATITTAESLPRCLMLACGALARELLAIRDANGWDHLDLHFLP
                     AELHLRPEKIPDAVSAAVARFAPDYDRIVVVYADCGTGGLLQARCAELGVEMIPGPHC
                     YAFFDGIEAHAMRAEREFTAFYLTDFLVRQFDAFVWRAMGLDRHPQLRDIYFAHYEKL
                     IYLAQTEDSALDAKAREAAERLGLRYERRTTGYGDLPGVLAQLSSSASQ"
     gene            complement(1257..>1661)
                     /locus_tag="EYO87_05465"
     CDS             complement(1257..>1661)
                     /locus_tag="EYO87_05465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HIC65438.1"
                     /translation="EVVRSQRQAFRIPSVVVLKDYVKPQKRVAFTRFNLFLRDEFCCQ
                     YCGAKGDLTFDHVVPRSRGGVTSWENVVAACSPCNLRKANRSLRHSGMNLRRKPRQPS
                     PGEMHAVGRRFPPNHLHDSWMDFLYWDAELES"
BASE COUNT          248 a          513 c          555 g          345 t
ORIGIN      
        1 cgctggtggc ggcggcggca atgctgtggc tggtgctggc catcaaggcg accccggccg
       61 gcatggtatg gccgcggatc aagggcaact cggccatgat gtgcttcttt gcgatcatgc
      121 tggtctcggc gctgccgctg gcggcgggcc tgcgcgtgct gggtggcggc gccagccccg
      181 cgccgatgct cagcggtgcc gcactgggtc ttgcggtcgg cagcctggcc gcgacgcttt
      241 acgcattttt ctgcacccag gattcgccgc tgttcttcct gacctggtat gggctggcca
      301 ttgccgtggt cacgctggca ggcgcggtcg ccgggcgcgg gatgctgcgc tggtagccgg
      361 tcacctttcg tgatgtgcgg aatgtgcgac caggtcccag cggcgatcct gcaccgatgc
      421 gcgtgaaatt gccgcggatt gtcacggcct ccttttcaag ccgacacatt ggtcccatat
      481 tgatggcgag gagagtttgc cccatgccgc tgccgcagtt cctgttgatg atcctgaccg
      541 ttctgctggc tgcggcgctg tcgctgctgg cagccatcgc cctggacctg ccgggggtcg
      601 cgctgatctt cgcggtgctg acgggcgcgg cgctgatcca tttcggtcat cgcgatggcc
      661 gcgacaatca cgacggctga atcgctgccc cgctgcctga tgctggcctg cggggccttg
      721 gcgcgcgaat tgctggccat ccgggatgcc aatggctggg atcatctgga tctgcatttc
      781 ctgcctgccg aactgcatct gcgtcccgag aaaattcccg atgcggtcag cgcggcggtc
      841 gcccgtttcg cccccgacta tgaccggatc gtggttgtct atgccgattg cggcacgggc
      901 gggctgttgc aggcgcgctg cgcggaattg ggggtcgaga tgattcccgg accgcattgc
      961 tatgccttct tcgacgggat cgaggcgcat gccatgcgcg ccgaacgcga attcaccgcc
     1021 ttctacctga ccgatttcct ggtccgccag ttcgatgcct tcgtctggcg cgccatgggt
     1081 ctggatcggc atccgcagtt gcgcgacatc tattttgccc attacgaaaa gctgatctat
     1141 ctggcccaga ccgaggattc ggcccttgac gccaaggcgc gcgaggccgc cgaacggctg
     1201 ggtctgcgct atgaacgccg aacgacggga tatggcgatc tgccgggggt tctggctcag
     1261 ctttccagtt cggcatccca gtagaggaaa tccatccagc tgtcatgcag gtggttgggg
     1321 gggaaacgcc gcccgacggc gtgcatttcg ccggggctcg gctggcgcgg cttgcgacgc
     1381 aggttcatcc ccgaatgacg caggctgcgg ttggccttgc gcagattgca gggcgaacag
     1441 gcggcgacca cgttttccca actggtgacg ccgccgcgcg agcggggcac gacgtgatcg
     1501 aaggtcagat cgcccttggc gccgcaatac tggcagcaga attcgtcccg cagaaaaaga
     1561 ttgaagcgcg tgaaagccac gcgcttctgg ggttttacgt aatctttcaa gacgacgacc
     1621 gagggtatcc ggaaagcctg ccgttgactt cggaccacct c
//
LOCUS       DTVW01000412            1031 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1510848, whole
            genome shotgun sequence.
ACCESSION   DTVW01000412 DTVW01000000
VERSION     DTVW01000412.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1031)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1031)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1031
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1510848"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..445)
                     /locus_tag="EYO87_05470"
     CDS             complement(<1..445)
                     /locus_tag="EYO87_05470"
                     /EC_number="2.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018000000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotate phosphoribosyltransferase"
                     /protein_id="HIC65439.1"
                     /translation="MSLPYPAREEIARLSARMLLEIKAVDFNAETPFTYASGLRGPTY
                     VDCRRIVSFPRVRQTLLDFMAATVMRDAGFEAFDNIAGGETAGIPFAAMMAERMALPM
                     TYVRKKPKGYGRNARIEGVMEEGQRVLLVEDLTTDGGSKLSFVDAI"
     gene            complement(442..>1031)
                     /gene="pyrC"
                     /locus_tag="EYO87_05475"
     CDS             complement(442..>1031)
                     /gene="pyrC"
                     /locus_tag="EYO87_05475"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009758122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HIC65440.1"
                     /translation="FIDRVLDPIRRATPGLTVVMEHITTSDGVAYIRDGGPGLGATIT
                     THHLVINRNAILAGGIRPHYYCLPVAKRESHRLALREAATSGEGRFFLGTDSAPHPDR
                     AKLQPCGCAGCFTAPNTMSILAHVFEEEDALDRLEAFASLNGAAFYGLPANEDRIRLV
                     KRDVPARYPATITAGKETVTVFDPFFTLFWHLEDS"
BASE COUNT          181 a          321 c          353 g          176 t
ORIGIN      
        1 ggatggcatc gacaaaggac agcttgctgc cgccgtcggt cgtcaggtcc tcgaccagca
       61 gcacccgctg gccctcctcc atcacgccct cgattcgggc attgcggcca tagcccttcg
      121 gcttcttgcg cacataggtc atcggcaggg ccatgcgttc ggccatcatg gcggcgaagg
      181 gaatgcctgc cgtctcgccg cccgcgatat tgtcgaaagc ctcgaaaccg gcatcgcgca
      241 tcaccgtcgc ggccatgaaa tccagcagcg tctggcgcac gcgcggaaag ctgacgatcc
      301 ggcggcaatc gacataggtc ggccccctga gccccgaggc ataggtgaac ggcgtctcgg
      361 cgttgaaatc gacggccttg atttccagca gcatccgggc cgagagccgg gcgatttcct
      421 cgcgcgcggg gtagggcagg ctcatgaatc ctccaggtgc cagaacagcg tgaagaaggg
      481 atcgaagacc gtcacggtct ctttgcccgc cgtgatcgtg gccggatatc gggccggcac
      541 atcgcgcttg accagtcgga tgcggtcctc gttggcgggc agaccataga aggcggcgcc
      601 gttgaggctg gcaaaggctt ccagccgatc cagcgcgtct tcttcctcga agacatgagc
      661 caggatcgac atcgtgttgg gcgcggtaaa gcagccggcg cagccgcagg gttgcagctt
      721 ggcgcggtcg ggatgcggcg cgctgtcggt gcccaggaag aaccgcccct cgccactggt
      781 cgcggcctcg cgcagcgcca ggcggtgcga ttcgcgtttg gccaccggca ggcagtaata
      841 atgtggtcga atgccgcctg cgaggatggc gttgcggttg atgaccagat gatgcgtggt
      901 gatcgtggcg cccagaccgg ggccgccgtc acggatatag gccacgccgt cgctggtggt
      961 gatatgctcc atcacgacgg tcaggccggg ggtggcgcga cggatcggat ccagcacgcg
     1021 gtcgatgaag a
//
LOCUS       DTVW01000413            2304 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1511999, whole
            genome shotgun sequence.
ACCESSION   DTVW01000413 DTVW01000000
VERSION     DTVW01000413.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2304)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2304)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2304
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1511999"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            46..717
                     /locus_tag="EYO87_05480"
     CDS             46..717
                     /locus_tag="EYO87_05480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008839617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1236 domain-containing protein"
                     /protein_id="HIC65441.1"
                     /translation="MRKLFMTTTAAAIALAGAAQAQTMATAGTDLNVRSGPGVQNEVI
                     GSIKSGAEVAVNGCIESANWCEVVAGDLSGWSYGDYLTVKAGDKIEPLYPNRQQIGVT
                     VIEAPAADKAGAGQNAAVGGVTGAAMGALVAGPIGAVAGAALGGTSGAAATEEPDAQV
                     TTYVTQNTVDPVYLEGEVVPGAGIPEDVTLYDIPEYPAYRYAQINGQTVLVNPNDRQI
                     VYIYR"
     gene            complement(772..1764)
                     /locus_tag="EYO87_05485"
     CDS             complement(772..1764)
                     /locus_tag="EYO87_05485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018633315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase S58 family protein"
                     /protein_id="HIC65442.1"
                     /translation="MRPGPRNLISDVAGLRVGNAAEARLKSGVTVLTGDAPFTAAVQV
                     MGGAPGSRETDLLAPDKLVTAVDALVLSGGSAFGLAACDGVMQALRAVGRGFAVGAAR
                     VPIVPGAIVFDLLNGGDKDWTENPYPALGRAAWQAAAPDFGIGSAGAGTGAMTGRLKG
                     GLGSASAVLENGLTMGALVVVNAIGSATIGEGPHFWAAPWELEGEFGRGGLPRSFPAA
                     QEPQPMKRQGEATTLAIVATDAALDKAALQRLAIAAHDGLARALVPSHTPMDGDLVFA
                     VSTGARRVADPVAQVFGLGHAASCTLARAVARAIHAAEPAPGDLQPCWSVRFGA"
     gene            complement(1761..2219)
                     /locus_tag="EYO87_05490"
     CDS             complement(1761..2219)
                     /locus_tag="EYO87_05490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017927607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65443.1"
                     /translation="MPRAIAATAVRSDVKVCFAAELAHPDRLAICLAGDGCLQMTVTE
                     LSTAAQYGAPIIVIVANNGQYGTIRMHQERHYPGRVSGTALFSPDFAALARAYGGHGE
                     IVREDGEFADAFARARDAGTLAVIELRLDPEALTTGATLSQIRDAARGAR"
BASE COUNT          380 a          820 c          772 g          332 t
ORIGIN      
        1 cgccaatgat ccgcaagccc ggatcggcaa acaaggagaa gaacgatgcg caagctgttc
       61 atgaccacca ccgccgccgc gatcgcactg gcgggcgcgg cccaggccca gaccatggcc
      121 acggccggca ccgatctgaa cgttcgttcg ggtcccggcg tgcagaacga ggtgatcggc
      181 tcgatcaagt cgggcgccga agtagccgta aacggctgta tcgaaagcgc caattggtgc
      241 gaggtcgtcg ccggcgatct cagcggctgg tcctatggcg attacctgac cgtcaaggcc
      301 ggcgacaaga tcgagccgct gtatcccaat cgccagcaga tcggcgtcac ggtgatcgag
      361 gccccggcgg cggacaaggc cggcgccggc cagaacgccg ccgtgggcgg cgtgacgggg
      421 gcggcgatgg gtgccctggt cgcgggaccg atcggcgcgg tcgcgggcgc ggcgcttggc
      481 ggaacctcgg gcgctgccgc gaccgaggaa cctgacgcgc aagttacgac ctacgtgacc
      541 cagaacaccg tcgatccggt ctatctggag ggcgaggtcg tgcccggtgc cggcattccc
      601 gaagacgtga ccctgtatga tattccggaa tatccggctt atcgctatgc ccagatcaat
      661 ggacagacgg ttctggtgaa cccgaacgac cgccagatcg tttacatcta tcgctgagtt
      721 tttccctctt ggcgatctct gggggcggtg cgcttgtcgc accgcccttt ctcatgcgcc
      781 gaaacgcacc gaccagcagg gttgcagatc gcctggcgcg ggttcggccg cgtggattgc
      841 gcgcgcgacc gcacgggcca gggtgcagga cgcggcatgg cccagcccga agacctgcgc
      901 caccgggtcc gcgacccgcc gcgccccggt cgagacggcg aagaccaaat cgccatccat
      961 cggcgtatga ctgggaacca gcgcgcgggc cagcccgtca tgcgcggcga tggccagccg
     1021 ttgcagcgcc gccttgtcca gggcggcatc ggtggcgacg atggcgaggg tcgtggcctc
     1081 gccctgacgt ttcatcggct gcggctcttg cgcggccggg aagctgcgcg gcaggccgcc
     1141 gcgcccgaat tcaccctcca gttcccacgg cgcggcccag aaatgcgggc cttcgccgat
     1201 ggtcgccgag cctatcgcat tgaccacgac cagcgccccc atggtcaggc cgttctccag
     1261 caccgccgag gccgagccca gcccgccctt cagccgtccc gtcatcgccc ctgttcccgc
     1321 gcccgcgctg ccgatgccga aatcgggcgc ggcggcctgc caggcggcac ggccgagcgc
     1381 gggataggga ttttcggtcc agtccttgtc gccgccattc agcagatcga agacgattgc
     1441 acccggcacg atgggcaccc gcgccgcgcc gaccgcaaag ccgcgcccca cggcgcgcag
     1501 cgcctgcatc accccgtcgc aggcggccag cccgaaggcc gagccgcccg acaggaccag
     1561 cgcatccacc gcggtgacca gcttgtcggg cgccagaaga tcggtttcgc ggctgcccgg
     1621 cgcgccgccc atgacctgca ccgccgcggt gaagggcgca tcgcccgtca gcaccgtgac
     1681 cccggatttc agccgcgcct cggccgcgtt cccgacccgc agaccggcca cgtccgaaat
     1741 caggtttcgc gggccgggcc tcatcgcgcg ccgcgtgccg catcgcggat ctggctcagc
     1801 gtcgcacccg tcgtcagcgc ctcgggatcc agccgcagct cgatcaccgc cagcgtgccg
     1861 gcatcgcggg cgcgggcgaa ggcatcggcg aattccccgt cttcgcgcac gatctcgcca
     1921 tggccgccat aggcgcgggc aagggccgcg aaatcggggc tgaacagcgc cgtgcccgag
     1981 acgcggccgg gatagtgacg ctcctgatgc atacggatgg tgccgtattg gccgttattg
     2041 gcgacgatca cgatgatagg ggctccgtac tgcgccgccg tcgaaagctc ggtcaccgtc
     2101 atttgcaggc agccgtcgcc ggcaaggcag atcgccagcc gatcggggtg ggccagctcg
     2161 gccgcgaagc agaccttcac gtcggaacgg accgcagttg ccgcgatggc cctcggcatc
     2221 gtcgagcgta ttcacgccgc cggagcgaat gctgctcgaa tacgccagcc tgaaccacca
     2281 cctgagcgat gaacgcgagg gctc
//
LOCUS       DTVW01000414            2038 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1513211, whole
            genome shotgun sequence.
ACCESSION   DTVW01000414 DTVW01000000
VERSION     DTVW01000414.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2038)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2038)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2038
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1513211"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..209)
                     /locus_tag="EYO87_05495"
     CDS             complement(<1..209)
                     /locus_tag="EYO87_05495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013029784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-II family nitrogen regulator"
                     /protein_id="HIC65444.1"
                     /translation="MKKIEAIIKPFKLDEVREALTALGVQGLTVSEARGFGRQKPVSG
                     GGEPLEVGSVENRSVLEGFHQPLYTL"
     gene            365..1960
                     /locus_tag="EYO87_05500"
     CDS             365..1960
                     /locus_tag="EYO87_05500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009571424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-hydrate dehydratase"
                     /protein_id="HIC65445.1"
                     /translation="MLTGTEILTTAQMRAIESAAMSGGRVSGLTLMERAGAAVAGQIR
                     LRWPRPGQVTVLCGPGNNGGDGYVIARHLARAGWRARVLGVDSRRGADAAEMQRRWRQ
                     IGPVEPLTRQSLRRAEGEDLCVDAIFGTGLTRPPEGAIADVLAGLGTDRFGNRMVAVD
                     CPSGLCMDSGAMLGRPRKGSPDDPRAALTVAFDSPKPGHLIGLGPVLCGDLVIADIGL
                     SGWRDQKPVPPSLAAIWPPIGPTRMRESGIARLAKRSDQAAHKFVHGHALVLAGPAGR
                     GGAARLTARAALRVGAGLVTIGPPEAAMGDHAGPPDALMRRCVDSADDLERMLSDARI
                     RAVAIGPGCGVDRAGVLLPALLASRRSCVIDADAITAIAGAPAMRATLHQACVLTPHE
                     GEFARLFPDLADRLGALPERGPAFSRIDAAREAAARCGAIVLLKGPDTVIAAPPSCDG
                     ANPHGRVIIHSAFDIPWLATAGAGDVLAGIIAGLLARGLPAPEAAGWGTLLHAKAARA
                     FGPGLIGDDLPQTLPAVLREMGM"
BASE COUNT          295 a          684 c          716 g          343 t
ORIGIN      
        1 agcgtgtaca ggggctggtg gaagccttca agcacggagc gattctcgac gctgcctacc
       61 tcgagtggct caccgccgcc gctgacaggc ttctggcggc cgaaaccgcg cgcctcgctg
      121 acggtgagtc cttgcacgcc aagcgcggtc agcgcttccc gtacctcatc gagtttgaac
      181 ggcttgatga tcgcctcgat ctttttcatc acaaatgatc cttcctcgcg gcttgcctga
      241 cgtctgattg gcgggtttca tcacgcgggt aaatgcggcg cggcggggat cgggggcgca
      301 aaccaccgga ccgcgattca ttgcccgttt ttaaggcata atggcaatat atcaggcaga
      361 cacaatgctg acaggcacgg aaatcctgac caccgcccaa atgcgcgcca tcgaatccgc
      421 cgccatgtcc ggcggccggg tttcgggact gaccctgatg gagcgggctg gcgccgcggt
      481 agcgggccag attcgcctgc gctggcccag gccgggacag gtcaccgtcc tgtgcggccc
      541 cggaaacaat ggtggcgacg gctatgtgat cgcccgtcat ctggcccgcg cgggctggcg
      601 ggcacgggtt ctgggcgtgg acagccggcg cggcgccgat gccgccgaga tgcagcgacg
      661 ctggcgccag atcggccctg tcgaacccct gacccggcaa tccctgcggc gcgccgaggg
      721 cgaggatctc tgcgtcgatg cgatcttcgg caccggtctg acccgcccgc ccgagggcgc
      781 gatcgcagac gttctggccg gcctcgggac agacagattc gggaaccgga tggtcgcggt
      841 cgattgcccc agcggcctgt gcatggacag cggcgcgatg ctgggcaggc cgcgcaaggg
      901 cagcccggat gatccccgcg ccgcgttgac cgtggccttc gacagcccca agcctggcca
      961 tctcatcggc ctcggccctg tcctctgcgg tgatctggtg atcgcggata tcgggctttc
     1021 aggctggcgc gaccaaaagc ccgtcccgcc gtcgcttgca gcgatatggc ctccgatcgg
     1081 cccgacacgg atgcgcgagt ccggcatcgc aaggctggcc aaacgatcgg atcaggcggc
     1141 gcataaattc gtccatggtc acgcgctggt ccttgcgggt ccggccggca ggggcggtgc
     1201 tgcgcgactg acggcgcggg cagccctgcg cgtgggcgcc ggtctggtga cgatcggccc
     1261 gcccgaggca gcgatgggcg atcatgccgg accgcccgac gcgctgatgc ggcggtgtgt
     1321 ggacagcgcc gacgatcttg agcggatgct gagcgacgcc cggatccgtg ctgtggcgat
     1381 cggtcccggc tgcggggtgg accgtgcggg ggtcttgctg ccggcgcttc tggcttcgcg
     1441 ccggtcctgc gtgatcgatg ctgacgcgat cacggcgatt gcgggggcgc cggccatgcg
     1501 cgcgacgctg caccaagcct gcgtgctgac accgcatgaa ggcgaattcg cgcggctgtt
     1561 tcccgacctg gccgaccgtc tcggggcgct gcccgagcgc ggcccggcct tttccagaat
     1621 agacgccgcg cgcgaggccg ccgcgcgctg cggtgcgatt gtgctgttga aaggccccga
     1681 cacggtgatc gctgcgccgc cgtcctgtga cggcgccaac ccgcatggca gggtcatcat
     1741 tcactccgcc ttcgacattc cctggctggc aacggccggc gcgggcgacg tgctggccgg
     1801 gatcatcgcc ggcctgctgg cgcgcggcct gcctgcgccg gaggccgccg gttggggaac
     1861 cctgctgcat gccaaggcgg ctcgcgcctt cggccccgga ctgatcggcg acgatctgcc
     1921 ccagacactg cccgccgtcc tgcgagagat gggcatgtga gtccggcttg ggacggttgg
     1981 atgctgtaat ggcggacccg gagcgattcg aacgcccgac ccccagattc gtagtctg
//
LOCUS       DTVW01000415            2963 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1514485, whole
            genome shotgun sequence.
ACCESSION   DTVW01000415 DTVW01000000
VERSION     DTVW01000415.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2963)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2963)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2963
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1514485"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..170)
                     /locus_tag="EYO87_05505"
     CDS             complement(<1..170)
                     /locus_tag="EYO87_05505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008204552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HIC65446.1"
                     /translation="MRILLVEDDPNTAKAIELMLTAASFNVFRTDMGEEGIDLAKLYD
                     YDLILLDLDLPD"
     gene            complement(269..544)
                     /locus_tag="EYO87_05510"
     CDS             complement(269..544)
                     /locus_tag="EYO87_05510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011750331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1153 domain-containing protein"
                     /protein_id="HIC65447.1"
                     /translation="MFVKKTEGPRTVTLPDGAILTVADLPPPETRWVASRKETVVAAV
                     RHGLITREDALRRYGLSEEEFEAWRKAVETHGRAALKVTALQRFRQP"
     gene            691..1863
                     /gene="mnmA"
                     /locus_tag="EYO87_05515"
     CDS             691..1863
                     /gene="mnmA"
                     /locus_tag="EYO87_05515"
                     /EC_number="2.8.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017997861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiouridine(34) synthase MnmA"
                     /protein_id="HIC65448.1"
                     /translation="MTATDLAPAPARASDLNSLGFAKPAAQTRVVVAMSGGVDSSVVA
                     AKLKSEGYDVIGVTLQLYDHGAALAKKGACCAGQDIHDARRVAERMGFPHYVLDYENR
                     FRESVIDEFADAYLGGATPVPCIRCNERVKFRDLLDTARDLDADCMATGHYIQRKHGA
                     GRAELHMAADINRDQSYFLFSTTQEQLDFLRFPLGHLESKAETRALAARFGLSVADKP
                     DSQDICFVPNGDYAAVIEKLRPGAADPGEIVDMEGTVLGRHRGVIHYTIGQRRGLGIG
                     GLDDPLYVVRLEPETRRVVVGPKSALATRIVPVSEVNWLGDQPFTGEIPVMVRIRSTR
                     PPRPAILRPRDATRAEVELLDAEEGVSPGQACVFYAPDSTRVLGGGWITLRRRKAA"
     gene            complement(1835..2245)
                     /locus_tag="EYO87_05520"
     CDS             complement(1835..2245)
                     /locus_tag="EYO87_05520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017997860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SufE family protein"
                     /protein_id="HIC65449.1"
                     /translation="MATAAFEEIAETFDFLDDWEDRYRHVIELGKAMPPMDPALQVPA
                     TKVEGCASQVWIMPMIEGGRFDFQGDSDALIVRGLIAVLHALYAGVPVNEIDAIDAQA
                     ELGRLGLDEHLSSQRSNGLRAMVARIRQLSAASA"
     gene            2370..2879
                     /locus_tag="EYO87_05525"
     CDS             2370..2879
                     /locus_tag="EYO87_05525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017997859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65450.1"
                     /translation="MTRLSATLLIPALFLSGCGGRFSDSGLNPFGWFSGGGSRQAATL
                     APEGGYGQNADQRPGIAQILSAGWQPLNEGRLLVVTGMAPSKGYSQVALITARPQPSG
                     RAAPDEDGILRLRLVGVPPLPDSAQATMAAAPATDAITAGLALSNIQLARIRAVEISG
                     AANVVRLNR"
BASE COUNT          504 a          971 c          945 g          543 t
ORIGIN      
        1 atgtccggca gatccagatc cagcaggatc aggtcatagt cgtaaagctt ggccagatcg
       61 atgccttcct cacccatatc ggtgcggaac acgttgaagc tggccgccgt cagcatcagt
      121 tcgatcgcct tcgcggtgtt gggatcgtcc tctaccagta gaatgcgcat ggcctgaatt
      181 gtccccgatt gttcttggtc cctggccgac catccggcga caaggttaat atcccgttac
      241 ttaaacccag aaaaacgcat gacgcaacct aaggttgtct aaagcgctgc aaggcagtga
      301 ctttcagcgc ggcgcggccg tgggtttcaa ccgccttgcg ccaggcctcg aattcttctt
      361 cggacaggcc atagcggcgc aatgcatcct cgcgcgtgat caggccatgg cgcacggctg
      421 caacgacggt ttccttgcgg ctggcgaccc agcgggtttc gggcggcggc agatccgcca
      481 ccgtcaggat ggcgccatcc ggcaatgtca cggtgcgggg gccttcggtc tttttcacga
      541 acattccacg gtccttaaat cgcgtctgcc aaccatgatc caaagatttt aagccacggt
      601 tattccgcgg cggcatttcc tcggggttcg ccttgagaat gcggggcatt tgcctatatt
      661 tcgatgcaat ccgatatccg ggatcatgcc atgaccgcca ccgaccttgc ccccgcacct
      721 gcgcgggcgt cagacctgaa cagccttggc ttcgccaagc ccgccgcaca gacgcgggtg
      781 gtcgtggcca tgtcgggcgg cgttgacagt tcggtcgtcg cggcaaagct gaaatccgaa
      841 ggctacgatg tcatcggcgt gacgctgcag ctttacgatc acggcgcggc gctggccaag
      901 aagggtgcgt gctgcgcggg ccaggacatc cacgatgccc gccgcgtggc ggaacggatg
      961 ggctttccgc attacgtgct ggactacgag aacaggttcc gcgaatcggt catcgacgaa
     1021 ttcgcggacg cctatctggg cggcgcgacg cccgtgccct gcatccgctg caacgagcgg
     1081 gtgaaattcc gcgacctgct ggacaccgcc cgcgatctgg acgccgattg catggcgacc
     1141 ggccactaca tccagcgcaa gcacggcgcc ggccgggccg aactgcacat ggccgccgat
     1201 ataaaccgcg atcaaagcta tttcctgttc tcgaccacgc aagagcagct tgatttcctt
     1261 cgttttccgc tgggccatct ggaaagcaag gcggaaacgc gcgcgctggc cgcccggttc
     1321 gggctgtcgg tcgcggacaa gcccgattcg caggacatct gcttcgttcc gaacggcgac
     1381 tatgccgcgg tcatcgaaaa gctgcgcccc ggcgcggccg atccgggcga gatcgtggac
     1441 atggaaggca cggttctcgg ccgtcatcgc ggcgtgatcc attacacgat cggccagagg
     1501 cgcggccttg gcatcggtgg actggacgat ccactctatg tcgtgcggct ggagcccgag
     1561 acgcggcgtg tcgttgtcgg cccgaaatcg gcgctggcta cccgcatcgt gcccgtcagc
     1621 gaggtcaact ggctgggcga tcagcccttc acgggcgaga tcccggtcat ggtgcgcatc
     1681 cggtcgaccc ggccgccgcg gccggcgatc ctgcgcccgc gcgacgccac ccgggccgag
     1741 gtcgaattgc tggatgccga ggagggcgtc agccccggac aggcctgcgt cttctatgcc
     1801 cccgacagca cccgcgttct gggcggcggc tggatcacgc tgaggcggcg gaaagctgcc
     1861 tgatccgcgc gaccatcgcc cgcaatccgt tcgagcgctg cgaggacaga tgctcgtcca
     1921 gccccagccg gcccagttcg gcctgcgcgt cgatggcgtc gatctcgttc accggaaccc
     1981 cggcataaag cgcgtgcagc actgcgatca gcccgcgcac gatcagcgcg tcgctgtcgc
     2041 cctgaaagtc aaagcgtccg ccctcgatca tcggcatgat ccagacctgg ctggcgcagc
     2101 cctcgacctt ggtcgcgggc acctgcagcg ccgggtccat cggcggcatc gccttgccca
     2161 attcgatgac atggcgatag cgatcttccc aatcgtcgag aaagtcgaag gtctcggcga
     2221 tctcttcaaa ggcggcggtg gccatgatgc gatcctttcg gctggcaatg ccggggttag
     2281 cgcgcgcggg cggcaaggtc aaagaggctt tcatcgcggt ttgctttcgc ctaggatttt
     2341 ggcaaagtga catcgcccga gggaccgcca tgacaagatt gtccgccacg ctgctgatcc
     2401 cggccctgtt tctttctggc tgcggcggcc gtttcagcga cagcgggctg aaccccttcg
     2461 gctggttttc gggcggcggc agccgccagg ccgccacgct ggctcccgag ggcggatacg
     2521 ggcagaacgc tgatcagcgg ccaggcattg cgcagatcct gtcggcgggc tggcagcccc
     2581 tgaacgaagg gcggctgctt gtcgtcaccg gcatggcgcc gagcaagggc tattcccagg
     2641 tcgcgctgat caccgcccgt ccgcagccct cgggccgagc cgcgccggac gaagatggca
     2701 ttcttcgcct gcgtctcgtg ggcgtgcctc cgcttccgga cagcgcgcag gcgacgatgg
     2761 cggccgctcc ggcgaccgac gccatcaccg ccggactcgc gctgtcgaac atccagcttg
     2821 cccggatccg cgcggtcgag atctccggcg cggcgaatgt cgtccggctg aaccgctaag
     2881 gccggttgat cccgcgcgcg cggcagtcta atccgcgcgg atcggaagcg tggccgagtg
     2941 gtttaaggct ctggtcttga aaa
//
LOCUS       DTVW01000416            2741 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1517132, whole
            genome shotgun sequence.
ACCESSION   DTVW01000416 DTVW01000000
VERSION     DTVW01000416.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2741)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2741)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2741
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1517132"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(74..241)
                     /locus_tag="EYO87_05530"
                     /pseudo
     CDS             complement(74..241)
                     /locus_tag="EYO87_05530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018000418.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
     gene            359..2566
                     /locus_tag="EYO87_05535"
     CDS             359..2566
                     /locus_tag="EYO87_05535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011749954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComEC family competence protein"
                     /protein_id="HIC65451.1"
                     /translation="MRAAAGPGPVPILSAPAAALPGLTRARSNAAAPADIRRPRPAAA
                     SRAGLFPWVPVCLSLGIALWFAWPALPGTGFWIIAGGLGLAGFVAARLSQPLAERGRI
                     GWAFSDGLRIGGMAIVLVVAGAGLAGIRSAHVAAPVLEWRYYGPVEGRLVEIDRSARD
                     RIRLTLDRVVLRDVSPARTPGKVRLSLMDMAAGDLPPLGQRVMLTGNLGPPSGPAAPG
                     SFDFRQYAWFEGLGAVGYSRTPVMAVAAPEGGLWWMHRARIAISRAMQDRIGGQKGAV
                     AAALMTGDRSGIEEATNAVMRASNLYHIISISGLHMGMLAGFVYGALRMALVAAQGIG
                     MICGWPVHKIAAGAAIAAASAYLWLSGGGVATERAFVMVAVMLGAILADRRAISLRTV
                     ALAATIILILSPESLISPGFQMSFAATIALILTYGPWSRLAPRLPFWLRPLLMLLVSS
                     FVAAMATSPLAAAHFNRMAQYGLLANLLAVPVMGTLVMPAGVIAALLAPIGLAGPALW
                     IMGLGTDWMLRVAEFVAGLDGAVTAVAAPPAPVLPLMGFGAVAAVLCWRRDLAASRPG
                     PLAVGLVAGLLMLAGSAALWLTAARPQILIAAEGEAVGLMTPSGRAVSKPSGGSFIVR
                     TWLLEDGDTATQEESAARPAWQGDRRDRQAVVTADWQVLHFTGKGSGRRALAACRPNR
                     IVVASEPIEGLPEVPPCLAFDPRRLRQSGAVSIDMKTEGPRITAASGRRPAPN"
BASE COUNT          374 a          893 c          982 g          492 t
ORIGIN      
        1 attgtatgaa gaccaggttc catagttcga tgacgttcgg gtcatccatg ttcacaaggt
       61 gccccccatt accttcgggg gtggatcgcg cgcggtcggt atcctcgatc cgcaacagga
      121 acctgccacc cctgccgcgc gcgaaaagcc agttgaacag cgccgtccgc gcgcctccga
      181 tatgcagata gccggtcggt gacggggcaa atcgggtgac gatcggggct tgttcggaca
      241 tgggaaaact tttcgctggt caatctcggg gcggacaggg ctgcgttaac actttggtaa
      301 gtgccgccgt gccagggtcg tgaggcagag atagagaagc catcgcgaaa ggacaagaat
      361 gcgcgccgca gcggggcccg gccctgttcc gatcctctcc gcgcccgcgg ccgcgctgcc
      421 gggactgacc cgggcccgct ccaacgccgc cgcgcctgcc gacatccgcc gcccccgtcc
      481 ggcggcggcc agtcgcgcgg gattgtttcc ctgggtgccg gtctgcctgt cgctggggat
      541 cgcgctgtgg ttcgcctggc ccgccttgcc cggaaccggg ttctggatca tcgccggagg
      601 tctggggctt gccggattcg tcgcggcccg gctgtctcag ccgctggccg aacgcggacg
      661 aatcggctgg gcgttcagcg acggtttgcg gatcggcggc atggcgatcg tgctggtcgt
      721 ggcgggggcc ggacttgccg gaattcgctc ggcccatgtc gcggcgccgg ttctggaatg
      781 gcgctattac ggaccggtcg agggacggct ggtcgagatc gaccgatccg cccgcgaccg
      841 tatcaggctg acgctggatc gcgtcgtgct gcgcgacgtg tcgcccgcgc ggacacccgg
      901 caaggtgcgg ctgtcgctga tggacatggc ggccggggat ctgccgccgc tgggtcagcg
      961 cgtcatgctg accggaaatc tgggcccgcc ctctggcccg gccgcgcccg gcagtttcga
     1021 tttccgccaa tatgcgtggt tcgaggggtt gggcgccgtc ggctacagcc gcacgccggt
     1081 catggccgtg gccgcccccg aaggcggcct gtggtggatg caccgcgccc ggatcgcgat
     1141 aagccgggcg atgcaggacc ggatcggcgg acagaaggga gcggtggccg ccgccctgat
     1201 gaccggcgac cgctcgggca tcgaagaggc cacgaatgcg gtgatgcgcg cctcgaatct
     1261 ctaccacatc atctcgatct cgggtttgca tatgggaatg ctggcgggtt tcgtctatgg
     1321 cgcgctgcgg atggcgctgg tggcggcaca gggcatcggg atgatctgtg gctggcccgt
     1381 gcacaagatc gcggccggtg cggcgatcgc ggcggcctcg gcctatctgt ggctttcggg
     1441 cggcggcgtc gccaccgaac gcgccttcgt gatggttgcc gtcatgctgg gcgcaattct
     1501 ggcagaccgg cgcgcgatct cgttgcggac ggtggcgctg gcggcgacga tcatcctgat
     1561 cctcagcccc gaatcattga tttcgccggg cttccagatg agtttcgcgg ccaccatcgc
     1621 actgatcctg acctatggcc cgtggtcacg tctggcaccg cgcctgccct tctggctgcg
     1681 gcccttgttg atgttgctgg tctcgtcctt cgtcgcggcc atggcgacct cgccccttgc
     1741 ggcggcccat ttcaaccgca tggcgcaata cggcctgctg gcgaatctgc tggcggtgcc
     1801 ggtcatgggc accctggtca tgccggccgg ggtcatcgcg gcgttgctgg ccccgatcgg
     1861 gttggcggga ccggccctgt ggatcatggg cctgggcacc gactggatgc ttcgcgtggc
     1921 cgaattcgtc gccggactgg acggggccgt caccgctgtc gcggcaccgc ccgccccggt
     1981 gctgccgctg atggggttcg gcgcggtcgc ggcggtcctg tgctggcggc gggatctggc
     2041 cgcgtcccgg cccggcccgt tggccgtggg tctggtcgcg ggtctgctga tgctggcggg
     2101 atcggccgcg ttgtggctga cagccgcgcg cccgcagatc ctgatcgcag ccgagggcga
     2161 ggctgtcggg ctgatgacgc catcgggccg ggcggtgtcg aaaccctcgg gcggatcctt
     2221 cattgtcaga acctggctgc tggaggatgg cgacaccgcc acacaagagg aatcggccgc
     2281 gcgtccggct tggcagggcg acagacgcga ccgccaggcg gttgtgacgg cagattggca
     2341 ggttctgcat ttcaccggca agggatcggg ccggcgcgcg cttgcggcct gccgcccgaa
     2401 ccgcatcgtc gtggccagcg aaccgatcga aggtctgccc gaggtgccgc cctgcctggc
     2461 cttcgatccc cgaaggctgc ggcaaagcgg agccgtttcc atcgacatga agaccgaggg
     2521 gccaaggatc acggccgcgt cagggcgccg ccctgcgccg aactgagccc ggcacagacc
     2581 aagggatgat tgtccgatcc gtggccgcgc gctagcctga tctcgggaag gagaaagcga
     2641 tgcgccacct tgtgcttgct gccctcttga cgctgcatcc gctatccatc gccgccgagc
     2701 cgctggcgat tctgccggtc aagctgctgg acacgtcgag a
//
LOCUS       DTVW01000417            1662 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1517133, whole
            genome shotgun sequence.
ACCESSION   DTVW01000417 DTVW01000000
VERSION     DTVW01000417.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1662)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1662)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1662
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1517133"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..680)
                     /locus_tag="EYO87_05540"
     CDS             complement(<1..680)
                     /locus_tag="EYO87_05540"
                     /inference="COORDINATES: protein motif:HMM:PF00108.21"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65452.1"
                     /translation="MARGGLSGSGVAVAGDESGRCPAVVPASATGRAVTMANEIGMVV
                     AGGALTRFGRRKDGSSFRDWARQAFAAALRDAGLQRRDIDALIVASESDFLTLQLNPA
                     SLLADELGLFGIRVMRAEGGGASGQVAVQAGAALVSSGQARRVAVLGLEPAAAHLSGA
                     DVAALYSLSFDAWTDGMTGIDSTSIYAMSALAFMRRTDATVSDFARVAVRNRQNARHN
                     PNAHLPLD"
     gene            complement(578..>1662)
                     /locus_tag="EYO87_05545"
     CDS             complement(578..>1662)
                     /locus_tag="EYO87_05545"
                     /inference="COORDINATES: protein motif:HMM:PF07690.14"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HIC65453.1"
                     /translation="YYLFPALTGRILAETGWSASILTASYTAGFLLWAFSSPLVGRTI
                     DIGHGIVAMRCGALVGASLLVAMSQAQTLAVFAPLMVLLGASMAATLYDPCFAILLRR
                     FGASAASPVATVTLVAGFATLLTFPMVGWLLQVTDWRAVMLAAAALVLAAAVLIPSEG
                     AARPADRSRHDMPRGRASPTVLLIGLSFATLMFSHAALLFILPLHLRKLPETADFALI
                     LPALLGPAQIFGRLVCAPLIRLFDPVLLARSVFGVMLLPPLALLVVPYQATTILPILL
                     LQGAGYGMHTILRPVLTRNHVPPFRLGRDLGLIAMIGLVMMALGPAAGGVVWQGAGFQ
                     VLAWLLLAMNLVGVLLLFPLPRRAER"
BASE COUNT          353 a          571 c          534 g          204 t
ORIGIN      
        1 atgtccagcg gcagatgcgc attgggattg tgccgcgcat tctgcctgtt tcgcaccgcg
       61 acgcgggcaa aatcgctgac ggttgcatcc gtgcggcgca tgaaggccag ggccgacatg
      121 gcatagatcg aggttgaatc gatccccgtc atgccgtctg tccaggcgtc gaaggacaga
      181 gaataaagcg cggcgacatc cgcgcccgaa agatgggcgg ccgcaggctc caatcccagc
      241 acggccacgc gccgcgcctg acccgaggag accagcgccg ccccggcctg gacagcaacc
      301 tggcccgacg cgccgccgcc ctctgcccgc atcacgcgga taccgaaaag acccagctca
      361 tccgccaaga ggctggcggg gttcagttgc agggtaagga aatcgctttc cgaggcgacg
      421 atcagcgcgt cgatatcgcg gcgctgcagg cccgcatcgc gcagggccgc cgcgaaagcc
      481 tgccgcgccc agtcgcgaaa gctgctgcca tccttgcggc ggccgaaccg ggtcagcgcc
      541 ccgcctgcga ccaccatgcc gatttcgttt gccatcgtca ccgctctgcc cgtcgcggaa
      601 gcgggaacaa cagcaggaca ccgaccagat tcatcgccag caacagccac gccagaacct
      661 gaaagcccgc cccttgccat acgaccccgc cggccgccgg tccaagcgcc atcatcacca
      721 gcccgatcat ggcgatcagg cccagatcgc ggcccagtct gaacggcggc acatggttcc
      781 gcgtcagaac cggccgcaga atcgtatgca tcccgtagcc cgccccctga agcagcagga
      841 tcggcaggat ggttgtcgcc tgatagggta cgacgagcag cgcgagcggc ggcaacagca
      901 tcacgccaaa aacgctgcgc gccagcagaa caggatcgaa aagccggatc agtggcgcgc
      961 agaccagccg tccgaaaatc tgcgcagggc ccagcagcgc cggaaggatc agcgcgaaat
     1021 cggcggtttc gggcagtttt cgcagatgca ggggcaggat gaacagcagg gccgcgtggc
     1081 tgaacatcag cgtggcgaag gacagcccga tcagcagcac cgtcggcgag gcgcgaccgc
     1141 ggggcatgtc atggcgcgac cggtccgccg ggcgggccgc gccttcggac ggtatcagca
     1201 ccgccgcagc caggaccagg gccgcagcgg caagcattac cgcgcgccag tccgtgactt
     1261 gcagcagcca ccccaccatc gggaaggtca gaagcgtggc gaacccggcc accagggtca
     1321 cggtcgcgac cggactggct gcggaggcgc cgaaccgacg cagcaggatg gcgaagcacg
     1381 gatcatagag ggtggctgcc atcgacgccc ccagcagcac catcagcggg gcaaaaacgg
     1441 caagcgtctg tgcttgcgac atggccacga gcaggctggc accgaccagc gctccgcagc
     1501 gcatcgccac tattccatga ccgatgtcga tcgtccgacc caccagcggc gaggaaaacg
     1561 cccagagcag gaaaccggcc gtataggacg cggtgaggat gcttgccgac caccccgtct
     1621 cggccaggat acgccccgtc agtgctggaa aaaggtagta aa
//
LOCUS       DTVW01000418            4093 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1517745, whole
            genome shotgun sequence.
ACCESSION   DTVW01000418 DTVW01000000
VERSION     DTVW01000418.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 4093)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4093)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4093
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1517745"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1312
                     /locus_tag="EYO87_05550"
     CDS             <1..1312
                     /locus_tag="EYO87_05550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010391827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF490 domain-containing protein"
                     /protein_id="HIC65454.1"
                     /translation="ISGNTNASIANSFIRTRSIEGPVSVDVSVNGPPSLNAVSGRIQL
                     SGGELADPGLGVRLQGLNVTADLRNGRILVDARSGVAAGGSLAVSGPVDLQAGNLDLT
                     IVLDNLVARDPNLYETQLNGQLTMSGNMASGPLIAGTVNVGATEIRIPSTGLGGAKAI
                     PDIQHVGAERPPVRGTRAKAGLEDYPSQASRDAGMAGPPSTPPANPPRLDLQINAPNQ
                     IFIRGRGVDAEMGGALRVTGTTRNVIPIGQLELIRGRVDLLGKRFDLAEGLVELQGSL
                     VPVIRLVAETSQNGITTRVIIDGEARDPEITFESSPELPEEEVLSQLLFGRGLDNISP
                     LQAAQLANAIAVLAGRGGEGIVGNLRNQFGLDDLDLQTDAEGNVQVRAGKYLSENLYT
                     DVAVGNNGKSTINLNLDVTESLTARGSVDSEGQSTLGIYFERDY"
     gene            complement(1337..2929)
                     /locus_tag="EYO87_05555"
     CDS             complement(1337..2929)
                     /locus_tag="EYO87_05555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HIC65455.1"
                     /translation="MAFEGYWLVLTAVAAGTISVLLAIAAIRFWDRLAAGSGRRSGRD
                     HLEGALKPTILLFRGGALVDATAPARTLLDRVNGPDDDWTRLRQWAGPRFPDGIARLD
                     RLDELGRVEMLGGNGAGSAALRLTAERIEDAMVRVTIVDPQAEHAGIVVDSMSQQAME
                     EELDLLRKSLDQTPMLVWRQDACDAITWANAAYLRRAEAHAGGMLSWPLPRLLDPPKP
                     APGGGPSTRRASLESDGIMSWYDCHSHQIGDQTMMFALPADAAVRAERSLREFVQTLT
                     KTFADLPIGLAIFDRQRHLQLFNPALIDLTGLPTGFLTARPTLFDLLDQLRESRMVPE
                     PKDFRSWRQHMNNLESAAATGHHVETWSLPGGQTYRVTGRPHPDGAVAFLFEDITSEI
                     SLTRKFRADLSLGENVIDGLDDGLAAFSSSGQILMTNQSYRRIWGGGATTLAEALSDW
                     EGRVENGPGFAALRARLTAGSETSRDTGLITGPDGALLDWRVTRIGGARQLLRFRRAE
                     IVATTPGQDGAAPLLTRAVCAD"
     gene            complement(3005..>4093)
                     /locus_tag="EYO87_05560"
     CDS             complement(3005..>4093)
                     /locus_tag="EYO87_05560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ActS/PrrB/RegB family redox-sensitive histidine
                     kinase"
                     /protein_id="HIC65456.1"
                     /translation="ASPSHAIVQLGFDLMQNSALMALTGGMTNPFALLVLAPVTIAAT
                     SLNLRQTLALSLAAVALISVAAMVAIPLQDADGGVLRLAPILALGHWAALVIGVAFFA
                     YYAHRVTAELSATSNALFATQMALAREQRLQHLGGVVAAAAHEMGTPLATINLIASEL
                     VEELNDRPDLQQDARALRDSAERCGTILRSMGRAGKDDLHMRSAPLHAVLEDAAGPHA
                     DRGPQLDIIADGPEIHRDPAVIHALRNLIQNAVDFAQSRVVVEADQGARHLTITIRDD
                     GPGYPPALLARIGDPYLTSRREGRQRSGYEGMGLGLFIAKALLERSGAVLTFANGGPG
                     AIVTVRWPLDRIRADSRVALGDNPLLFD"
BASE COUNT          726 a         1350 c         1381 g          636 t
ORIGIN      
        1 catttccggc aacaccaacg cctcgatcgc caacagcttc attcgcacgc gcagcatcga
       61 ggggccggtc agcgtcgatg tcagtgtgaa cggtccgcca tcgctgaacg cggtcagcgg
      121 ccgcatccag ctcagcggcg gtgaactggc cgatcccggc ctgggcgtgc gtctgcaggg
      181 attgaacgtc accgccgatc ttcggaacgg ccgcatcctg gtagatgcgc ggagcggcgt
      241 cgcggcgggc ggatcgctgg ccgtttccgg accggtcgat ctgcaggcgg gcaatctgga
      301 tctgaccatc gtgctggaca atctggtcgc gcgcgatccg aacctctacg agacgcaact
      361 gaacgggcaa ttgacgatga gcggcaacat ggcctcgggc ccgctgatcg ccggcaccgt
      421 caatgtcggc gcgaccgaga tccgaatccc ctcgaccgga ctcggcgggg caaaggccat
      481 tccggatatc cagcatgtcg gtgcagagcg tccgccggtt cgcggcaccc gggccaaggc
      541 cgggctggag gattatccca gccaggcgtc gcgcgatgcc ggcatggccg gcccgccctc
      601 gaccccgccg gccaatccgc cgcggctgga cctgcagatc aatgcgccga accagatctt
      661 catccgcggc cgcggcgtcg atgccgaaat gggtggcgcg ctgcgggtca cgggaaccac
      721 gcgcaacgtg atccccatcg gtcagctgga actgatccgg ggccgggtcg atctgctggg
      781 caagcggttc gatctggccg aggggctggt cgaattgcag ggcagcctgg tgccggtgat
      841 ccggctggtg gccgaaacct cgcagaacgg gatcacgacc cgggtcatca tcgatggcga
      901 ggcgcgcgat cccgagatca ccttcgaatc ctcgcccgaa ttgcccgagg aagaggtcct
      961 gtcgcagttg ctgttcggcc ggggcctgga caatatcagc ccgcttcagg ccgcccagct
     1021 tgccaatgcg atcgcggtgc tggccgggcg cggcggcgaa ggaatcgtcg gcaatctgcg
     1081 caaccagttc ggcctggacg atctggacct tcagaccgat gccgagggaa atgtgcaggt
     1141 ccgtgcgggc aagtatctca gcgaaaatct ttataccgac gtggccgtcg gcaataacgg
     1201 caagagcacg atcaacctca acctggacgt gaccgaaagc ctgaccgcgc gcggttcggt
     1261 ggacagcgaa ggtcagagca cgctgggcat ctatttcgag cgcgactact gaggacggag
     1321 gccgcgcggg cggtgcctaa tccgcgcaca cggcccgggt cagaagcggg gcggccccgt
     1381 cctgaccggg tgtcgtggcg acgatctcgg cccggcggaa gcgcagcaat tgccgcgcgc
     1441 cgccgatccg ggtgacccgc caatccagca gcgcgccatc cggtccggta atcaggccgg
     1501 tgtcacgcga ggtttccgac cctgccgtca gccgggcgcg cagggcggca aagcccggac
     1561 cgttctcgac ccttccttcc caatcgctca gcgcctcggc aagggtggtg gcgccgccgc
     1621 cccagatccg gcgataagac tggttcgtca tcaggatctg gccgcttgac gaaaaggccg
     1681 ccaacccgtc atccagcccg tcgatgacat tttcgcccag cgacagatcg gcgcggaatt
     1741 tccgggtcag cgagatttcc gaggtgatgt cctcgaacag gaaagccacc gcgccatcgg
     1801 gatgcggccg tccggtgacg cgataggtct gcccgcccgg cagcgaccag gtctcgacat
     1861 ggtggccggt ggcggcggcg ctttccagat tgttcatgtg ctggcgccag ctgcggaaat
     1921 ccttgggctc gggaaccatg cgcgattcgc gcaactgatc cagcaggtcg aacagggtcg
     1981 gccgcgcggt caggaatccg gtcggcagcc cggtcagatc gatcagcgcc gggttgaaca
     2041 attgcaggtg ccgctggcgg tcgaagatgg ccagtccgat gggcaggtcg gcaaaggtct
     2101 tggtcagcgt ctggacgaat tcgcgaaggc tgcgctcggc ccggacggcg gcatcggcgg
     2161 gcagggcgaa catcatcgtc tggtcgccga tctgatggct gtggcaatca taccaggaca
     2221 tgatcccgtc gctttccagc gatgcgcgcc gggtggaggg cccgccgccc ggagcaggtt
     2281 tgggaggatc cagcagccgc ggcaatggcc agctgagcat gccgccggca tgagcctcgg
     2341 cccggcgcag ataggcggca ttggcccagg tgatcgcgtc gcaggcatcc tgccgccaga
     2401 ccagcatcgg cgtctggtcc agcgacttgc gcagcaggtc aagctcttcc tccatcgcct
     2461 gctgggacat ggaatcgacg acgatcccgg catgttccgc ctgcggatcg acgatggtga
     2521 cacggaccat ggcatcctcg atgcgttcgg cggtcaggcg cagggcggcg ctgccggcac
     2581 cgtttccacc cagcatttcc acccgaccca gttcgtccag ccggtccaga cgcgcaatgc
     2641 cgtcgggaaa gcgcggcccg gcccattgcc gcagccgcgt ccagtcatcg tccgggccat
     2701 tgacccgatc cagcagggtc cgggccgggg cggtcgcatc gaccagggcg ccgccgcgga
     2761 acagaaggat ggtgggtttc agcgccccct ccagatggtc gcgtcccgac cggcggccgg
     2821 aacccgccgc aagccggtcc cagaaccgga tcgccgcgat cgccagcagg accgagatcg
     2881 tcccggccgc aacagcggta agaacaagcc aatatccctc gaaagccacg tcgtcgcgcc
     2941 cccattgcgt tttcacaact gtaaggcgat ctgacttaat gaaaagttaa aatgcccgac
     3001 ttgttcaatc gaacagaagc gggttgtccc ccagggcgac gcggctgtcg gcgcggatgc
     3061 gatccagcgg ccagcgcacg gtgacgatgg cgccgggtcc gccattggcg aaagtcagca
     3121 ctgccccgga ccgttccagc agcgccttcg cgatgaaaag accaaggccc atgccctcgt
     3181 atccgctgcg ctggcggccc tcgcgccgac tggtaagata ggggtcgccg atgcgcgcca
     3241 gcaaggccgg cggatagccg ggaccatcat cgcggatggt gatcgtcagg tggcgggcgc
     3301 cctgatcggc ctcgaccacg acacgggatt gcgcgaaatc gacggcgttc tggatcaggt
     3361 tgcgaagggc gtggatgacg gcgggatcgc ggtgaatctc gggcccgtcg gcgatgatgt
     3421 ccagttgcgg gccgcgatcg gcatggggtc cggcggcatc ttccagaacc gcgtgcaagg
     3481 gcgcgctgcg catgtgcaga tcgtcctttc cggcccgtcc catgctgcgc aggatggtgc
     3541 cgcagcgttc cgccgaatcg cgcagggcgc gcgcgtcctg ttgcaggtcg ggacggtcgt
     3601 tcaactcttc caccagttcc gaggcgatca gattgatcgt cgccagcggg gttcccatct
     3661 catgggccgc cgccgcgacg accccgccca gatgctgcaa ccgctgttcc cgcgccagtg
     3721 ccatctgggt ggcgaaaagc gcgttcgacg tggccgacaa ttccgccgtg acgcggtggg
     3781 cgtaatacgc gaagaaggcc accccgatca ccagtgcggc ccaatgccca agcgccagga
     3841 tcggcgccag ccgcagcacc ccgccatcgg catcctgcag cggaatggcc accatcgccg
     3901 cgaccgagat caacgccacc gcggccagcg acagcgccag cgtctggcgc aggttcagcg
     3961 aggtcgcggc gatggtgacg ggggccagaa ccagcagcgc gaagggattg gtcatgcccc
     4021 cggtcagcgc catcaaggcc gaattctgca tcagatcgaa gccgagctgc acgatggcat
     4081 ggctgggcga ggc
//
LOCUS       DTVW01000419            2786 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1523535, whole
            genome shotgun sequence.
ACCESSION   DTVW01000419 DTVW01000000
VERSION     DTVW01000419.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2786)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2786)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2786
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1523535"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..306
                     /locus_tag="EYO87_05565"
     CDS             <1..306
                     /locus_tag="EYO87_05565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019297832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HIC65457.1"
                     /translation="QDAYAQLAARFADYGGWAVLFAALTPFPFKVITIFSGAVGFSLP
                     LFILTSIIGRAGRFFIVAGLLWRFGPPIRDFIERRLGLVFTLFMAALIGGFAALRYL"
     gene            303..779
                     /locus_tag="EYO87_05570"
     CDS             303..779
                     /locus_tag="EYO87_05570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020039258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="disulfide bond formation protein B"
                     /protein_id="HIC65458.1"
                     /translation="MTGTRLALLAAAGSAALLIAALGFQAAGYAPCELCILQRWPHVV
                     AVVIGALIWLTGWVRPLSVLGMAAVAVAMGLAIYHTGVEIGWWPGPSQCSGGVTDFAK
                     MSLKDLTAKLKTAPVVRCDEVVWRFVGLSMASWNAILSAGLAAIWGMAARAGRSSI"
     gene            complement(1001..1077)
                     /locus_tag="EYO87_05575"
     tRNA            complement(1001..1077)
                     /locus_tag="EYO87_05575"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:1.23"
                     /anticodon=(pos:complement(1041..1043),aa:Pro,seq:tgg)
     gene            complement(1119..1640)
                     /locus_tag="EYO87_05580"
     CDS             complement(1119..1640)
                     /locus_tag="EYO87_05580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF192 domain-containing protein"
                     /protein_id="HIC65459.1"
                     /translation="MSRNRPVATALLLLTMMSAVTAQPAVAALEPAACAQDVALFMTP
                     DGARAVRVEIADDPQERARGLMFRESLPADTGMLFLYETPRESSFWMKNTYLPLDIVF
                     MDARGVIRYIHRNARPLDETPIPGALAGDPDPLRLAILEVAAGEADRLGLATGQPMAY
                     PALDQGQAAWPCR"
     gene            complement(1627..2229)
                     /locus_tag="EYO87_05585"
     CDS             complement(1627..2229)
                     /locus_tag="EYO87_05585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013068057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold shock domain-containing protein"
                     /protein_id="HIC65460.1"
                     /translation="MSDENGAVLQKGLVKWFDPGKGYGFILNEQGGADILLHANVLRN
                     FGRSSVADQSLVTFYVQPTARGLQASEIVSIEPPESDGTAPIADLDNGIIEHLDQLPL
                     HPARVKWFDKSKGFGFANIFGHPEDVFLHVEVLRHSGFADLAIGEAIALRVVEGPRGL
                     MAAQIASWDQGMTTQGGGSAEIPGPFVDDSDEALLAHVAE"
     gene            complement(2400..>2786)
                     /locus_tag="EYO87_05590"
     CDS             complement(2400..>2786)
                     /locus_tag="EYO87_05590"
                     /EC_number="1.4.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008557638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal 5'-phosphate synthase"
                     /protein_id="HIC65461.1"
                     /translation="RQIAQNGKAAFVMHWKSLRRQIRVRGTVTREDGPQADAYFESRA
                     LQSRLGAWASHQSQPLDSRASLVSAAAKQALLRGPSPARPPFWGGFRIHPRQIEFWAD
                     GAFRLHDRFCWRLQADNRWFVTRLSP"
BASE COUNT          466 a          884 c          910 g          526 t
ORIGIN      
        1 caggatgcct atgcccagct tgccgcgcgc tttgcggatt atggcggctg ggcggtgctg
       61 ttcgcggcgc tgacgccctt tccgttcaag gtcatcacga tcttttcggg cgccgtcggc
      121 ttttcgttgc cgttgttcat cctgacctcg atcatcggtc gcgcgggccg gttcttcatc
      181 gtcgcggggc tgttgtggcg ctttggcccg ccgatccgcg acttcataga gcgtcggctt
      241 gggctggttt tcaccctgtt catggctgcg ctgatcggcg gttttgccgc gttgaggtat
      301 ctgtgaccgg aacaagactt gcccttctgg ccgccgcggg ttcggcggcc ctgctgatcg
      361 ccgcgctagg atttcaggcc gccggctatg cgccctgcga attgtgcatc ctgcaacgct
      421 ggccgcatgt cgtggcggtg gtgatcggcg cgctgatctg gctgaccgga tgggtgcgac
      481 cgctgtccgt gctggggatg gcagcggtag ccgttgctat gggccttgcc atctatcaca
      541 ccggggtcga aatcggctgg tggccggggc cgtcgcaatg ctcgggcggg gtgaccgact
      601 tcgcgaagat gtcgttgaaa gatctgacgg caaagctgaa aaccgccccg gtcgtgcgct
      661 gcgacgaggt cgtgtggcgc tttgtgggcc tgtccatggc cagctggaac gcgatccttt
      721 ccgcaggact ggcggcaatc tggggcatgg ctgcccgcgc gggccgttca tcaatctagg
      781 gtcggacttg ctgcggccct tcgtctggcg cgcagccgct tcacagcgcg cgccgcgcct
      841 tctgttcggg catgccatca ttccggatgg tcgtgatgcg gcacgcccaa ggtatttgac
      901 ctctggcagc gggcaagacc cgagccattg cgcagcaata ccggcaggtc ctatcgtggg
      961 gcgaagggga ctgatgccct ctgcgtcgga atgcgaatgg tggtcggggc gagaggattc
     1021 gaacctccga cctacggtac ccaaaaccgt cgcgctacca ggctgcgcta cgccccgacg
     1081 aggcggcttc tagcggatcg cgccggccgg ggaaaggcct aacgacaggg ccaggccgcc
     1141 tgaccctggt ccagcgccgg ataggccatc ggctgacccg tagccagtcc cagacggtcg
     1201 gcctctcctg ccgcgacttc cagaatcgcc agccgcagcg gatcgggatc gcccgccagg
     1261 gcgccgggta tcggggtctc gtccagcggc cgggcattgc ggtgaatgta gcggatcacg
     1321 ccgcgcgcat ccatgaagac gatgtccagc ggcagatagg tgttcttcat ccagaagctg
     1381 gattcgcgtg gcgtttcgta aagaaacagc atccccgtat ccgctggcag cgattcccgg
     1441 aacatcaggc cccgggcgcg ttcctgcgga tcgtcggcga tctcgacacg gaccgcgcgc
     1501 gctccgtccg gggtcatgaa cagagccacg tcctgcgcgc aggccgcagg ttccagcgca
     1561 gccaccgcag gctgcgcggt cacggcgctc atcatcgtca gcaggagaag cgcggtcgcg
     1621 accggtctat tccgcgacat gggcgagcag cgcctcgtct gagtcatcga caaaagggcc
     1681 cgggatctcg gcactgccac ccccttgtgt cgtcatgccc tgatcccagc ttgcgatctg
     1741 cgcggccatc aggccccgcg gcccttccac gacgcgcagt gcgatcgctt cgccgatggc
     1801 gaggtcggca aaacccgaat ggcgcagcac ctcgacatgc aggaagacat cttcgggatg
     1861 gccgaagata ttggcgaaac cgaaaccctt ggacttgtcg aaccatttca cccgcgccgg
     1921 atgcagcggc aactggtcga gatgttcgat gatgccgttg tccagatcgg cgatcggcgc
     1981 cgttccgtcg gattccggcg gttcgatcga gacgatctcg gaggcctgca ggccacgtgc
     2041 cgtcggctgg acatagaagg tgaccagcga ttgatcggcg acggaagacc gcccgaagtt
     2101 ccgcagcacg ttggcgtgca gcagaatgtc ggcgcccccc tgttcgttca ggatgaagcc
     2161 gtatcccttg cccggatcaa accacttgac caggcccttt tgcaaaacag caccgttttc
     2221 atcactcatc gtcatttcat tccgcgcaat gcgcttgttt cagaacgtca aaccggcaac
     2281 cttgtcggtt ctccagatat ggtgcgcgca caggtcacat gaaggcgctc cgatttcaag
     2341 cgggtcaaat caacgcgagg cattcccagc cttataccga agacctcatg cgtcaagcct
     2401 caaggcgaca agcgcgtgac aaaccagcga ttatctgcct gcagccgcca gcagaagcgg
     2461 tcgtgcagac ggaatgcgcc gtcggcccag aactcgatct gtcggggatg aatgcggaag
     2521 ccgccccaga agggcgggcg cgccggcgag gggccgcgca gcagcgcctg cttcgccgcg
     2581 gctgaaacca ggctggcacg gctgtcaagc ggctgcgact gatgcgaggc ccaggccccc
     2641 agccggcttt gcagggcgcg gctttcgaaa taggcgtcgg cctgcggacc gtcctcgcgg
     2701 gtgacggtgc cgcgaacgcg gatctggcga cgcagtgatt tccagtgcat gacgaaggcg
     2761 gccttgccgt tctgcgcaat ctggcg
//
LOCUS       DTVW01000420            1124 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1524853, whole
            genome shotgun sequence.
ACCESSION   DTVW01000420 DTVW01000000
VERSION     DTVW01000420.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1124)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1124)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1124
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1524853"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..198)
                     /locus_tag="EYO87_05595"
     CDS             complement(<1..198)
                     /locus_tag="EYO87_05595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005628613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HIC65462.1"
                     /translation="MANGTVKWFNSTKGFGFIQPESGKRDVFLHISAVERAGLPHPQD
                     GQAVTFDIEAGRDGRESATNLK"
     gene            complement(477..>1124)
                     /locus_tag="EYO87_05600"
     CDS             complement(477..>1124)
                     /locus_tag="EYO87_05600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_354113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase I"
                     /protein_id="HIC65463.1"
                     /translation="FLATIPSSISRPMNTGIDIHAMTASQMFGVPVEGMDPMIRRQAK
                     AINFGVIYGISGFGLSRNLRIPRADAQSFIDTYFERFPEIRAYMDRTVTDAKSDGSVR
                     TLFGRRINTPGINQTGPAAGGARRAAINAPIQGAAADIIRRAMIRMPDGIGHLPARML
                     LQVHDELVFEVEEGAIDDLIAAARTVMEGAAEPVIRLSVPLVVDAGHGATWAEAH"
BASE COUNT          196 a          357 c          367 g          204 t
ORIGIN      
        1 tttcaggttc gtcgccgatt cgcggccgtc acggccggct tcgatgtcga aggtcacggc
       61 ctggccgtcc tgcggatggg gcagaccggc gcgttcgacc gccgagatgt gcaggaacac
      121 gtcccgcttg ccgctttccg gctggataaa gccgaagcct ttggtggaat tgaaccattt
      181 cacggtgcca ttggccatcg tgatgtctcc tgtcatttgc cgcccgcgag attgcgacgg
      241 cccggccggt cagatcaact cgaagactga agccgcaaga cgggagacag atcgaagcag
      301 agataacata gcggatttca tatagtggat cgcgaagcat cgcgcaagca ccctcgattc
      361 cagaccgatc ggggatggtc actgaaacgg gcctcgggct gggatggtca gcgaccgcgc
      421 gatctgcggc cgccggatca tccgcctgtc ctgacatggg caaccgcagg tccggatcaa
      481 tgcgcctcgg cccaggtcgc gccgtgcccg gcatcgacga ccagcggcac cgacagcctg
      541 atcacgggct cggccgcgcc ctccatgacg gtgcgggcgg cggcgatcag gtcgtcgatc
      601 gcgccctcct cgacctcgaa gaccagttcg tcatggacct gcaacagcat ccgcgccggc
      661 agatggccga tgccatccgg catccggatc atggcacggc ggatgatgtc ggcggcagcc
      721 ccctgaatgg gcgcgttgat cgccgcgcgc cgcgcgccgc ccgcggccgg cccggtctgg
      781 ttgattccgg gcgtgttgat gcgccgcccg aacagcgtcc gcacgctgcc atctgatttc
      841 gcgtcggtca cggtgcgatc catataggcg cggatttccg ggaatcgctc gaaataggtg
      901 tcgatgaagc tttgcgcatc cgcccgcgga atgcgcaggt tgcgcgacag gccgaagccc
      961 gaaatgccgt agatcacgcc gaaattgatc gcttttgcct gccggcggat catcgggtcc
     1021 atgccttcga cgggcacgcc gaacatctgg ctggcggtca tggcgtgaat gtcgatgccg
     1081 gtgttcatcg gcctgctgat gctgctgggg atcgtggcca aaaa
//
LOCUS       DTVW01000421            1522 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1525249, whole
            genome shotgun sequence.
ACCESSION   DTVW01000421 DTVW01000000
VERSION     DTVW01000421.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1522)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1522)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1522
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1525249"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            12..824
                     /locus_tag="EYO87_05605"
     CDS             12..824
                     /locus_tag="EYO87_05605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019462376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HIC65464.1"
                     /translation="MAAESGLDLAAIVGTGTGGRIVSADIAAYLPATLELVFAAMFIA
                     VAVGIPLGLVTAVWRNKWPDYLSQVLAIGAISMPRFFLGLLLQLCFAMWLMWLPLGGR
                     LPIIVIPPPTVTGFLTIDSLLAGDMNAFVTSLRHLAMPAIAMSLSPLATIMRMMRAST
                     VEVMSQDYVTTARALGLPRGKIILKYVARNAVSATLTVIGLYFGWLLGGTVLVETVFD
                     WPGLGLYATKAIISQDMMPVIGVALVIGLLFVLANLIIDLLYGVINPKVRYS"
     gene            821..>1522
                     /locus_tag="EYO87_05610"
     CDS             821..>1522
                     /locus_tag="EYO87_05610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006937998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HIC65465.1"
                     /translation="MTEITDPVAQSAPQGDDRLRRAWFRFRQSKLSMVGAGMVAVVLF
                     FTLFGGLLAPFPEHVAGGVDTGNRFEAPSSEHPFGTNELGQDVLSLVMAGTTVSVLAG
                     FGVVLIGSVIGTLVGAIAGFVGGWTDEILMRLTDLTLTIPGLILAMAVAAALGPGFAN
                     MVIAISLSWWPGYARLVRGEVLAEREEVYVTAARAIGAGPGRILFRHILPNVLSPIIV
                     KMSLDMGFAILTVAAL"
BASE COUNT          216 a          471 c          493 g          342 t
ORIGIN      
        1 aagctcggaa gatggccgct gagagcggtc tggatctcgc cgcaatcgtc gggaccggaa
       61 caggtgggcg tatcgtcagc gccgacattg cagcctatct gcctgccacg cttgagcttg
      121 tctttgccgc catgttcatc gctgtggcag tcggtattcc gctgggcctt gtcaccgctg
      181 tctggcgcaa caaatggccg gattacctga gccaggttct ggccatcggc gcgatttcaa
      241 tgccgcgctt ctttctgggt ctcctgttac agctttgctt cgcgatgtgg ctgatgtggc
      301 tgcctcttgg cgggcgcctt ccgattatcg tgatcccgcc cccgacggtc acagggttcc
      361 tgaccatcga ctcgctgctg gccggggaca tgaacgcctt tgtcacatcg ctgcgccacc
      421 tcgccatgcc cgccatcgcc atgtcgctgt cgccgctggc cacgatcatg cggatgatgc
      481 gcgcttcgac cgtcgaagtg atgagccagg actatgtgac aaccgcccgc gcgctgggtc
      541 tgcctcgggg caagatcatt ctcaaatacg ttgcccgcaa cgccgtgtcc gccaccctga
      601 cggtgatcgg cctttatttt ggctggctgc tgggcgggac ggtgcttgtc gaaaccgtct
      661 tcgactggcc cggtctggga ctctatgcca ccaaggccat catctcgcag gacatgatgc
      721 cggtgatcgg tgtcgcgctg gtgatcgggc tgctgttcgt gctggcgaac cttattatcg
      781 acctgctcta tggagtgatc aacccgaagg tgcgttactc atgaccgaga tcaccgatcc
      841 cgtggcccaa tccgcaccgc aaggcgacga tcgcctgcgc cgcgcatggt tccggttccg
      901 ccagtccaag ctgtcgatgg tcggcgcggg catggtggct gtcgtgctgt tcttcaccct
      961 gttcggcggt cttctggccc cgttccccga gcatgtggca ggcggcgtgg acacgggaaa
     1021 ccgctttgag gcgccgtcgt cggagcatcc gttcggcaca aacgagctgg gtcaggacgt
     1081 gctttcgctg gtcatggcag gcaccacggt ttcggtgctg gccgggttcg gcgttgtgct
     1141 gatcggatcg gtcatcggca cgctggtggg ggccatcgcc gggtttgtcg gcggctggac
     1201 cgacgagatc ctgatgcggc ttaccgacct cacgctgacc attccggggc tgatccttgc
     1261 catggccgtg gccgcagcgc ttgggccggg ctttgcaaac atggtcatcg caatctcgct
     1321 gtcctggtgg ccgggatacg cccggctggt gcggggcgag gtgttggcag agcgggaaga
     1381 ggtctatgtg accgccgcgc gcgccatcgg tgcggggccg gggcgtatcc tgttccgcca
     1441 catcctgccg aatgtcctgt cgccgatcat cgtgaagatg tctctggaca tgggctttgc
     1501 gatcctgacg gttgccgcgc tc
//
LOCUS       DTVW01000422            1718 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1525544, whole
            genome shotgun sequence.
ACCESSION   DTVW01000422 DTVW01000000
VERSION     DTVW01000422.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1718)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1718)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1718
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1525544"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..542
                     /locus_tag="EYO87_05615"
     CDS             <1..542
                     /locus_tag="EYO87_05615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007205387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="cobaltochelatase subunit CobS"
                     /protein_id="HIC65466.1"
                     /translation="DVMFVIQRVLEADGKLTLLDQNEVITPNPCFRLFATANTVGLGD
                     TTGLYHGTQQINQGQMDRWSLVSTLNYLSHDAEAAIVLAKNPNYNNEKGRKAINQMVT
                     LADLTRTAFMQGDLSTVMSPRTVISWAQNARIFDNVGYAFRLTFLNKCDELERQTVAE
                     FYQRLFDEELPESAAASAK"
     gene            complement(747..1019)
                     /locus_tag="EYO87_05620"
     CDS             complement(747..1019)
                     /locus_tag="EYO87_05620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010392570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65467.1"
                     /translation="MAEPILPPVTPPLKRSVTIDGHRTSVSLEDAFWHDLAALAKRRG
                     ETRASLIGRIDHARPPEVGLATALRLFVLAETKRGLAQIRTAGTQA"
     gene            complement(1012..1212)
                     /locus_tag="EYO87_05625"
     CDS             complement(1012..1212)
                     /locus_tag="EYO87_05625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011907773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4169 family protein"
                     /protein_id="HIC65468.1"
                     /translation="MTRIINLRQARKHRARNASRAAGDTNAAKFGEAKPLRDLRKAEK
                     DRALRDHDSHRIDRTDETGPDG"
     gene            complement(1285..>1718)
                     /locus_tag="EYO87_05630"
     CDS             complement(1285..>1718)
                     /locus_tag="EYO87_05630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005794952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="class II fumarate hydratase"
                     /protein_id="HIC65469.1"
                     /translation="PGKVNPTQAEALTMVCAHVMGNDAAVTFAGSQGHFELNVYNPMM
                     SYNVIQSMQLLGDAASSFTDNMVVGTQANTARIDKLMKESLMLVTALAPSIGYDNATK
                     VAKTAHRNGTTLRQEAVALGFVDAETFDRIVRPEDMIGPRE"
BASE COUNT          281 a          561 c          568 g          308 t
ORIGIN      
        1 ccgacgtgat gttcgtgatc cagcgcgtgc tggaagccga cggcaagctg accctgctgg
       61 accagaacga ggtcatcacc cccaatccct gcttccggct gtttgcgacc gccaacaccg
      121 tgggcctggg cgatacgacc ggcctctatc acgggaccca gcagatcaac cagggacaga
      181 tggaccgatg gtcgctggtc tcgacgctga attatctgtc ccacgacgcc gaggccgcca
      241 tcgtgctggc caagaacccc aactacaaca acgagaaggg tcgcaaggcg atcaaccaga
      301 tggtgacgct ggcggatctg acgcggacgg ccttcatgca gggcgatctg tccaccgtga
      361 tgtcgccgcg gacggtcatt tcatgggcac agaacgcgcg catcttcgac aatgtgggct
      421 atgccttccg cctgaccttt ctcaacaaat gcgacgaact cgagcgtcag acggtggccg
      481 aattctacca gcgcctgttc gacgaggaat tgccggaaag cgccgccgcc agcgcgaaat
      541 agccgtcccg ccgcctgcgg gggccgcgcc gcgggccgga tgggcgtgag atcgtccgtg
      601 atcaggatca cggcatcccc cccttgtggc ggccggcgcc gcgcgtcaag cccggtcttt
      661 tccggtgaaa aggccggtcc cagcgttccg gccccggaca ggaaagcacc ggcgtccggg
      721 cttgcatgac ctccgggcag gtcagatcat gcctgcgtcc ctgccgtgcg gatctgcgcc
      781 agaccgcgct ttgtctcggc cagaacgaac agccgcaacg cggtggccag tccgacctcg
      841 ggcggccggg cgtggtcgat cctgccgatc aggcttgccc gagtctcgcc gcgccgcttc
      901 gcgagcgccg ccaggtcatg ccagaatgca tcctccagcg agaccgaggt gcggtgcccg
      961 tcgatcgtca ccgaccgctt gagcggcggg gtcacggggg gcaggatcgg ctcagccatc
     1021 cgggccggtc tcgtcggtcc ggtcgatcct gtggctgtca tggtcgcgca gggcgcggtc
     1081 cttttccgcc ttgcgcagat cgcgcagcgg cttcgcctcg ccgaatttcg ccgcattcgt
     1141 gtcgcccgcc gcgcggctgg cattgcgggc gcggtgtttg cgggcctgtc gcaggttgat
     1201 gattcgggtc atggcgttcc gatggaaagg gccggggcgg agcggcatac taccccggac
     1261 cggcccgatc cggtcaagcg ctgttcattc cctggggccg atcatgtcct cgggacgaac
     1321 gatccggtcg aaggtctcgg catcgacgaa gccaagcgcg acggcttcct ggcgcagggt
     1381 cgtgccgttc cggtgcgcgg tcttggcgac cttggtggca ttgtcatagc cgatggaagg
     1441 cgccagcgcc gtgaccagca tcagcgattc cttcatcagc ttgtcgatgc gggctgtatt
     1501 ggcctgcgtg cccaccacca tgttgtcggt gaaggacgag gccgcatcgc ccagaagctg
     1561 catcgactgg atgacgttgt aggacatcat cgggttgtag acgttcagtt cgaaatgacc
     1621 ctggctgccg gcaaaggtca cggcggcgtc gttgcccatc acatgcgcgc agaccatggt
     1681 cagcgcctcg gcctgggtcg ggttgacctt gccgggca
//
LOCUS       DTVW01000423            1304 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1526121, whole
            genome shotgun sequence.
ACCESSION   DTVW01000423 DTVW01000000
VERSION     DTVW01000423.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1304)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1304)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1304
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1526121"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..346)
                     /locus_tag="EYO87_05635"
     CDS             complement(<1..346)
                     /locus_tag="EYO87_05635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphatase"
                     /protein_id="HIC65470.1"
                     /translation="MESDPIGAAVLGILEGLTEFIPVSSTGHVLLAGYFLGFASPGRA
                     FEVMIQLGAVLAILSVYSARIWYYLSTAPRDARSRRFIAAVLLAFAPAVVVGVAAYDI
                     IKKVLFETPVLIA"
     gene            complement(346..>1304)
                     /locus_tag="EYO87_05640"
     CDS             complement(346..>1304)
                     /locus_tag="EYO87_05640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007795117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="complex I NDUFA9 subunit family protein"
                     /protein_id="HIC65471.1"
                     /translation="PWVFLATASWGKRSRGWRVRIAVRRPDEALFTRTYGAVGQVVPV
                     LCNIREELSVRAAMSDAEAVVNCVNITQAQGKSTFDNIFDEGASHIARISAETGVARI
                     VHISGIGVDPDSDSRYVAAKARGEAAVLEHRPDAVILRPSVIFGSGDNFFNRFAAMSR
                     LGPVMPIAGARTRMQPVFVDDVALAATKGATGEAEPGIYELGGPDVMTLREIVARTLT
                     VVHRRRLVLNMPFWIARIGATMLDGAQYVSGGMFTNTVLSRDQLALLRQDNVVSPEAR
                     GLKDLGIQPTAVEAVLDDYLWRFRPSGQYDAIKDSAKNLRSL"
BASE COUNT          256 a          441 c          406 g          201 t
ORIGIN      
        1 cggcgatcag cacgggtgtc tcgaacagga ccttcttgat gatatcgtag gccgcgacgc
       61 cgacgaccac cgccggagcg aatgccagca gcaccgccgc gatgaagcgg cgcgaccggg
      121 cgtcgcgcgg tgctgtggaa aggtaatacc agatccgcgc cgaatagacg ctgaggatgg
      181 ccagcaccgc gccaagctgg atcatcacct cgaaggcgcg gccgggcgag gcgaagccca
      241 ggaaataccc ggccagcagg acatggccgg tcgaggaaac ggggatgaat tcggtcaggc
      301 cctcgagaat cccgaggacc gcagcgccaa tcggatcgga ttccatcaca ggctccgcag
      361 gttcttggcg gaatccttga tcgcgtcata ttgcccggac gggcgaaagc gccaaagata
      421 atcgtccagc accgcctcga cggcggtcgg ctggattccc agatccttca gacctctggc
      481 ctctggcgaa acgacattgt cctgacgcaa cagcgcaagc tggtcgcggc tgagcacggt
      541 attggtgaac atcccgccag acacgtattg cgccccgtcc agcatcgtcg caccgatccg
      601 ggcgatccag aacggcatgt tcaggaccag cctgcggcgg tgaacgacgg tcagggtccg
      661 ggcgacgatt tcgcgcaggg tcatcacgtc ggggccaccc agttcataga ttccgggttc
      721 cgcctctccg gtggcgccct ttgtcgcggc cagtgcaacg tcatcgacga agaccggctg
      781 catccgcgtc ctcgcccccg cgatgggcat gaccggcccc agccgcgaca tcgcggcaaa
      841 gcggttgaag aagttgtcgc cggacccgaa gatcaccgag ggccgcagga tcactgcatc
      901 gggccggtgt tccagcaccg ccgcctcgcc ccgcgccttg gctgcgacat agcggctgtc
      961 cgagtcggga tccacgccga tccccgaaat gtggacgatc cgcgccaccc ccgtctcggc
     1021 cgaaattcgc gcgatatggg acgcaccctc atcaaagata ttgtcgaagg tgctcttgcc
     1081 ctgcgcctgc gtgatgttga cgcaattgac caccgcctcg gcatccgaca tcgcggcgcg
     1141 gaccgacaat tcttcgcgga tgttgcaaag gaccggcaca acctgaccga ccgcgccgta
     1201 ggtgcgtgtg aacaacgcct cgtcgggtcg gcgcacggcg atccgcacac gccagccgcg
     1261 cgaccgcttg ccccagctcg ccgtagccaa gaatacccag ggtc
//
LOCUS       DTVW01000424            2528 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1526844, whole
            genome shotgun sequence.
ACCESSION   DTVW01000424 DTVW01000000
VERSION     DTVW01000424.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2528)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2528)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2528
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1526844"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(214..798)
                     /locus_tag="EYO87_05645"
     CDS             complement(214..798)
                     /locus_tag="EYO87_05645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017997935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HIC65472.1"
                     /translation="MIAARARHLSVDPDIAYRCSRPDQRHGEQALNESHPCSSDGADL
                     TIAVENPLAADLAPLFRRHWAEMHADTPPESNHALPREGLAVPEIAFFVARRNGFAVA
                     MGALKRLCNGHAEIKSMHVLAEYRGAGLSRLLLVHMIDHARRDGLTQLSLETGAQASF
                     AAARALYGRAGFSICPPFGAYREDPNSVFMTLAL"
     gene            complement(932..>2528)
                     /locus_tag="EYO87_05650"
     CDS             complement(932..>2528)
                     /locus_tag="EYO87_05650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017997852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="penicillin acylase family protein"
                     /protein_id="HIC65473.1"
                     /translation="LLANDLDIPLIAPSLYYLARLQLTSGGVIGATIPGMPVVLSGRN
                     PQLAWGISPAPVDDADIAMEEVQPGNPNRYRGPDGWTDFRTRTEVIRVLDESDRPITL
                     RWTDNGPLVPALDPGLRSVTPQGYVAALRWTGSVRDDSTMSALIGLMRATDIDSAATA
                     MRRTVAPAMNVTLADPKRVRQVTVGALPRRATDHPTGGQMPVPGWLRAGQWQGVDESG
                     PGKAVAPSRDAVVIATGERGPLALRRARLGRLLDDREIHSRDSFIAAQLDVVSPAARA
                     LLPLVGADLWFTGDPAAAGTPERQRQDALNLLAEWDGSMSEHLPEPLIYTAWMQALQD
                     RLIRDEIGPLAEDITRLYPGFIDAVFRNTGGAARWCDVVQSAPIEDCTTIARQALDSA
                     ILDLSQRFGPDVASWRWGDAHQGRQIHPGLGYLPALGWVVNLTQSLSGGDFTVSRTGL
                     LGGAERPYEAVSGPGYRGVYDLADPDSSVFILSTGQSGHPLSRHYDDLADLWRRGEYI
                     GMSLDPELARAAATGVTRLEPAR"
BASE COUNT          432 a          879 c          837 g          380 t
ORIGIN      
        1 cgcttgctct atccagttga gctacggggc cgtgccgcct tgatagcggc tggaataccg
       61 gtccgcaacg cagggcgtcg gtgtcgcgcg tccgatttct gatcgccggg cgaaatccgg
      121 caagcccgcg gcgcccgccc ggccgcccga tccggatggc cggatgccgt atcggcaagg
      181 cggcttgcca aatgcccgtc cacgaccgag gggtcacaat gccagcgtca tgaaaacgct
      241 gttgggatcc tcgcgatagg ctccgaaagg cgggcagatg gaaaaacccg cgcggccata
      301 caacgcccgc gccgcggcga aagatgcctg cgcaccggtt tccagcgaca gctgcgtcag
      361 accatcgcgc cttgcatgat cgatcatgtg caccagaaga agccgcgaca gaccggcgcc
      421 gcgatattcg gccagaacat gcatcgactt gatctcggca tggccgttgc acaaccgctt
      481 cagcgcgccc atcgcgaccg caaatccgtt ccggcgggcg acgaagaagg cgatctcggg
      541 aacggccaga ccctctcgcg gcagggcgtg gttcgattcg ggtggggtgt cggcatgcat
      601 ctcggcccag tggcgccgaa acaggggcgc cagatccgcg gccagggggt tttcgacggc
      661 gatggtcagg tccgccccgt cagacgaaca aggatgtgac tcgttcaacg cttgctcccc
      721 gtgcctttga tctggtcgag aacaccgata tgcgatgtcc ggatcgactg aaaggtgtct
      781 tgccctggct gcgatcatcg gcggaatgtg aaacgagata ccgcgcaagc cggggcgatc
      841 gcgccgatcc tcgcactctt tccaaatacc ttcggggggt ccggggggcg acgcgccccc
      901 ggccgcccgc cgccggcgac cgggcggcgg ttcagcgcgc cggttccagc cgcgtcacgc
      961 ctgtcgcagc tgcgcgcgcc agttccggat caagcgacat gccgatatac tcgccacgcc
     1021 gccacagatc ggccagatcg tcgtagtggc gcgacagcgg gtgtcccgat tgcccggttg
     1081 acaggatgaa gaccgaggaa tccggatcgg ccagatcata gacgccgcga tagcccggac
     1141 ccgacaccgc ctcgtagggt cgttcggccc cgcccagcaa gccggtgcgc gagacggtga
     1201 aatcgccgcc cgacagcgat tgcgtcaggt tcaccaccca gccaagcgcc ggaagatagc
     1261 cgaggccggg gtgaatctgc cggccctgat gcgcgtcccc ccaccgccag cttgccacat
     1321 cgggaccgaa acgctgactc agatccagga ttgcgctgtc cagcgcctgc cgcgcgatgg
     1381 tcgtgcaatc ctcgatgggc gcgctttgca ccacgtcgca ccagcgcgcc gcgccgcctg
     1441 tattccggaa cacggcatcg atgaaacccg gatacaggcg ggtgatgtcc tcggccagcg
     1501 gaccgatctc gtcgcggatc agacgatcct gcagggcctg catccaggcg gtatagatca
     1561 gcggctcggg caggtgttcg ctcatcgagc catcccattc ggccagcagg ttcagcgcgt
     1621 cctgcctctg ccgctcgggc gtgccggcgg cggcgggatc gccggtgaac cacagatcgg
     1681 ccccgaccag aggcagcagc gcccgcgccg cggggctgac cacgtccagc tgcgcggcga
     1741 tgaagctgtc gcgggaatgg atttcccggt cgtcaagcag gcgccccaga cgggcccggc
     1801 gcagggcaag cgggccgcgt tccccggtcg cgatcacgac cgcatcgcgc gaaggagcca
     1861 ccgccttgcc cggcccggat tcgtcgactc cctgccactg acccgcgcgc agccagcccg
     1921 gcaccggcat ctggccgccg gtcggatgat ccgtggcgcg acgcggcagg gcgcccaccg
     1981 tgacctggcg cacccgtttc ggatcggcca gagtcacgtt catcgcgggc gcgacggtgc
     2041 ggcgcatggc ggtcgcggcg ctgtcgatat cggtcgcccg catcagtccg atcagtgccg
     2101 acatggtgct gtcgtcgcgc accgagccgg tccagcgcag ggccgcgacg tagccctggg
     2161 gcgtcacgct gcgcagcccc ggatccagcg ccggcaccag cggaccatta tcggtccagc
     2221 gtaacgtgat cgggcgatcg gattcgtcca gcacccggat cacctcggtc cgggtgcgga
     2281 aatcggtcca gccgtcaggg ccgcgatagc ggttcggatt gccgggctgg acctcctcca
     2341 tcgcgatatc ggcgtcgtcc accggcgcgg gcgagatccc ccaggccagc tgcggattgc
     2401 gtcccgacag gaccaccggc atccccggta tcgtcgcgcc gatcaccccg cccgaggtca
     2461 gttgcagccg cgccagataa tagagcgatg gcgcgatcag cggaatatcc agatcattgg
     2521 ccagcagc
//
LOCUS       DTVW01000425            1089 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1527736, whole
            genome shotgun sequence.
ACCESSION   DTVW01000425 DTVW01000000
VERSION     DTVW01000425.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1089)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1089)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1089
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1527736"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(581..829)
                     /locus_tag="EYO87_05655"
                     /pseudo
     CDS             complement(581..829)
                     /locus_tag="EYO87_05655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007426119.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase U35"
BASE COUNT          180 a          339 c          373 g          197 t
ORIGIN      
        1 agcctcccga acgggaggcc ttttgcgttt caagcccgtg tcaacactgt gtcaacagaa
       61 ccccgacgcc gcgtgtcaac gaatggcgtc gagtcgagcc gcgctctccg cttgatagag
      121 ccgtgcatgc gagcctgatg gtccccgacg ccacctcggg agccccccca tgccgaagac
      181 caacgacgcc gcgctcgccg tccttgcgcc atcatgtccg gctggatacc aagaaattgt
      241 ccgcgagttc ccgttccgat caagggagaa gcgggcttca agccaagttc tcctgctgac
      301 gtgtggagtt acgaagtcga tgttgagact ggtcgaggac actgaggaga aggtgcgcgc
      361 gcaagctcgc ctcgagcgcg aagtaagcca cgcgcttgaa aaccaaggat ctcggaacat
      421 cggtttccgg ggcggaaacg tcgatcacac agtctatgcg tcaggcgaag ggttactctg
      481 ggtcgcgttc ggtggtgtaa gcgaagactc ggctgttcca cgattctgga atgcttttgg
      541 cgtatatcat ccagatcgcc cgacccagat gatcacggtt gcccgagggc gcggcctgat
      601 aggcgtcgcg cagcacgcgg cccaccgtgt ctccgaggat gatggggaag tcggaggtgg
      661 tgtgaagcgc gcgggtgacg aggctcgcgg gcgagagcgc catggtggac tcgccgcgca
      721 gcgtcagcag ctccttcgcc atgtccacgg gcgtcgaata ggcgtagcgc cgagccggtt
      781 cgctaagctc gtggcgcggg ttgatccggg cgtagagcgc ctcccccatc tgccgggcgc
      841 gcaggacggg atcgtcctgg ctctcgccca tctcgacgcg gatctgttcg gtgcggatcg
      901 caggcgcgct gcgcttcgcc agcgcctcga aggccgcacg gcgcgcgctg tcgggatcgg
      961 cgccttcgtc gatctggccg tcgatccacg actggtccag cccggcgatg cgggcgatgg
     1021 agcggatctc ggcgttcgcc gcggcgcggg tctcggtgtt gggcgccctg tcggcggcct
     1081 ctcggatgg
//
LOCUS       DTVW01000426            1200 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1528056, whole
            genome shotgun sequence.
ACCESSION   DTVW01000426 DTVW01000000
VERSION     DTVW01000426.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1200)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1200)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1200
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1528056"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            1..75
                     /locus_tag="EYO87_05660"
     tRNA            1..75
                     /locus_tag="EYO87_05660"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:1.23"
                     /anticodon=(pos:33..35,aa:Arg,seq:tct)
     gene            336..>1200
                     /locus_tag="EYO87_05665"
     CDS             336..>1200
                     /locus_tag="EYO87_05665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65474.1"
                     /translation="MIFPVTPGDVLEIRLLLQSVEPEGAGRALGRAKVSVRFLDSRKR
                     VIDPYLATGAIVVDLPESVEVLPSGPRTDAGDAAATAIWYLPAPPDAVSLRIGGWADT
                     ARLRSARVLESAIDWGREAGRRASSLQTRYSRQRERLIRRLFPETTEEVIALACHAGA
                     AQMAALQSHFKPGGDWAPVLSSIVAAEWQAEARTRRERLRAQGDNAPRIGFIGSERGF
                     ERLSWLTETIWLREAEYLDQFRYLDLEIVVLEAAATGGGSGEGGEWNQAFASLTGDLP
                     ERGSAFFDVARD"
BASE COUNT          205 a          376 c          397 g          222 t
ORIGIN      
        1 ccccgtagct catctggata gagcaagcgc cttctaagcg ctaggttccg ggttcaagtc
       61 ctggcggggt caccaggcac cgaatggcgg actcgcgtgc cggaatctca atccggcgcg
      121 caagggaaag cttcggtgac gaggccagcc tggacaccgc cgcgcgggcc tgacagatcc
      181 gttgccggaa accgttggat accgggcttt tcatcctcgg gttgatcaca ggtcgtggca
      241 ggtgctaagc gccgatgata gatcggccca atccgtgagc gaactgattc atgaacccac
      301 ccatttcgga tcaaggcgat gacggagaga caacggtgat ctttccggtg acgccgggcg
      361 atgtcctgga aattcgcctt ctgcttcagt ccgtcgaacc tgaaggtgct ggtcgcgcgc
      421 ttggcagggc gaaggtatcg gtccggtttc tggattcgcg caagcgcgtg atcgatccct
      481 atctcgccac cggcgccatc gtggtggacc tgccggaatc ggtcgaagtc cttccatccg
      541 gccctcgaac cgatgccggc gatgcggctg ccaccgccat ctggtatctt cccgcgcctc
      601 ccgatgctgt ctcgcttcgc atcggaggat gggcggacac ggcaagactg cgttcggcac
      661 gagtgctaga atccgcgatc gactggggcc gcgaggcggg ccggcgcgcg tcgagcctgc
      721 agacccgcta tagccgccag agagagcggc ttattcgccg cctcttcccc gaaacaacgg
      781 aagaggtgat cgccctcgcc tgccatgccg gtgccgcgca gatggctgcg ctgcaaagcc
      841 atttcaagcc gggtggcgat tgggcaccgg tgctgtcgtc gatcgtcgcc gccgaatggc
      901 aggccgaggc gcgaacgcga cgagagcgtc ttcgagccca gggcgacaac gcgccgcgca
      961 tcggctttat cggctcggag cgcggcttcg aacggctttc ctggctgacc gagacgatct
     1021 ggctgcgcga ggcggaatat ctcgatcagt tccgctatct cgacctggag atcgtggtgc
     1081 tcgaggctgc ggcgaccggg ggcggctccg gtgagggtgg ggaatggaac caggccttcg
     1141 ccagtctgac aggcgatctt cccgaacgcg gctccgcctt tttcgatgtc gcccgcgacg
//
LOCUS       DTVW01000427            2237 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1529273, whole
            genome shotgun sequence.
ACCESSION   DTVW01000427 DTVW01000000
VERSION     DTVW01000427.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2237)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2237)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2237
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1529273"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..83
                     /locus_tag="EYO87_05670"
     CDS             <1..83
                     /locus_tag="EYO87_05670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_353891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="methylmalonyl-CoA epimerase"
                     /protein_id="HIC65475.1"
                     /translation="IGAHGKPVLFLHPKDFNGCLIELEQI"
     gene            83..352
                     /locus_tag="EYO87_05675"
     CDS             83..352
                     /locus_tag="EYO87_05675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010392779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1467 family protein"
                     /protein_id="HIC65476.1"
                     /translation="MNLTAGIILYFIYWFLTLFVVMPIGQKSQQDVGQIVPGTPAGAP
                     VGTPWKRKLIVVTAITTILWAITASLILGGGFTRADVQNFDRFLR"
     gene            complement(309..1022)
                     /locus_tag="EYO87_05680"
     CDS             complement(309..1022)
                     /locus_tag="EYO87_05680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010392778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65477.1"
                     /translation="MVLRSLILAWGDLLRPRILSLVAMGIGLTILLFVALQAGTFWLI
                     RLVTPGSFALPWLGSVDVGDALSWGSLALFPLMGFFLMAPVAAGFSGLFADRVADAVE
                     DIHYPASRGRALDFLDGMLESLAVMAAVLGVAILSLMLTPFLGPLAPLLFYGANGWLL
                     GREFFQMAARRHLDAPLASDMRRRHGLRVTLAGALVAVALTIPVVNIGVPLLAAAAFT
                     HLFHLLSAGTGRNSGHRRG"
     gene            complement(1022..1594)
                     /locus_tag="EYO87_05685"
     CDS             complement(1022..1594)
                     /locus_tag="EYO87_05685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005609751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase"
                     /protein_id="HIC65478.1"
                     /translation="MDYRNDAALDFLASRRSHPPKLLKTPAPGRAEILRLLELAARAP
                     DHGKLEPWRFLVLERAALERLTPILRQAILTEGQDAATAEKAASAFASPVIVAVISAP
                     VSSGKVPEWEQILSAGAVCLGLLNAALASGWGAAWLTGFAALDQGFARTHLGLNEDER
                     IAGLIHIGTRGDTPPERPRPDIEAKTSWLE"
     gene            complement(1738..1989)
                     /locus_tag="EYO87_05690"
     CDS             complement(1738..1989)
                     /locus_tag="EYO87_05690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009564791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65479.1"
                     /translation="MFTIEHDFDATVITLIDEAEAGARPLNEDVVILTFDDRVVLEQM
                     SPDGNDVLRVTLSMQQLTELRLALNLPEGNYRIEPENKA"
BASE COUNT          407 a          738 c          744 g          348 t
ORIGIN      
        1 ggatcggtgc ccacggcaag ccggtgctgt tcctgcaccc gaaggatttc aacggctgcc
       61 tgatcgaact ggagcagatc tgatgaacct gaccgcgggg atcatcctct atttcatcta
      121 ttggttcctg acgctgttcg tggtcatgcc gatcggtcag aaatcccagc aggacgtggg
      181 ccagatcgtt ccgggcacgc cggcgggcgc gccggtcggc acgccgtgga agcgcaagct
      241 gattgtggta acggcgatca ccacgatcct ttgggcgatc accgccagcc tgatcctggg
      301 cgggggcttt acccgcgccg atgtccagaa tttcgaccgg ttcctgcgct gagcaggtga
      361 aacaggtggg tgaaggccgc agccgccagc agcggcacgc cgatattgac caccgggatc
      421 gtcaaggcca ctgcgaccag cgccccggcc agggttacgc gcagcccgtg ccggcgtcgc
      481 atgtcgctgg ccagcggggc gtccagatgc cggcgcgcgg ccatctggaa gaattcgcgc
      541 cccagcagcc agccattcgc gccataaaac agcagcggcg caagcggccc cagaaagggt
      601 gtcagcatca gcgacaggat cgccacgccc agaaccgccg ccatcaccgc cagcgattcc
      661 agcatgccgt ccagaaaatc cagcgcgcgg ccccggcttg cgggatagtg gatgtcctcg
      721 accgcgtcgg ccacccgatc ggcgaacagc ccggaaaagc ccgccgccac cggcgccatc
      781 aggaagaagc ccatcagcgg aaacagtgcc agcgaacccc atgacagcgc atctccgaca
      841 tcgaccgatc caagccaggg caaggcgaaa gatccgggcg tgaccagccg gatcagccag
      901 aaggtgcccg cctgaagcgc cacgaatagc aggatcgtca gcccgatccc catcgccacc
      961 agggacagga ttcgcggccg cagcagatcg ccccaggcca ggatcagcga ccgcaggacg
     1021 atcattccag ccagcttgtc ttggcctcga tatccgggcg cggccgctcg ggcggagtgt
     1081 cgccgcgggt gccgatatgg atcaggccgg cgatccgctc gtcctcgttc aggcccagat
     1141 gggtgcgcgc gaagccttgg tccagtgccg cgaaacccgt cagccacgca gcgccccagc
     1201 ccgaggccag ggccgcgttg agcaggccca gacagaccgc gcccgcagac aggatctgtt
     1261 cccattcggg caccttgccg ctgctgacag gcgctgaaat caccgccacg atcacgggcg
     1321 atgcgaaggc cgaggcggcc ttctcggcgg tcgcggcatc ctgtccctcg gtcaggatcg
     1381 cttggcgcag gatcggggtc agcctttcca gcgccgctcg ttcaaggacc aggaaccgcc
     1441 agggttccag cttgccgtga tcgggggcgc gggcggccag ttccagaagg cgcaggatct
     1501 cggcccggcc gggcgcgggt gtcttcagca gcttgggcgg gtgcgagcgg cggctggcca
     1561 gaaaatccag cgcggcatcg ttgcggtaat ccatcggcat ctccttcagc gaatcccgga
     1621 acggatcccg gcgccgttgt cacaaaggcg cgggcgcggt gcaagccggc gacggcagat
     1681 cccgcatacg cctcgacttc acgaccggtg ccgcggcctg ccgggcaggg gacgggatca
     1741 cgccttgttt tcgggttcga tccggtaatt gccttcgggc agattcagcg ccagccgcaa
     1801 ttccgtcagc tgctgcatcg acagggtgac gcgcaggaca tcatttccgt ccggactcat
     1861 ctgttccagc acgacgcggt cgtcgaaggt caggatcacg acatcctcgt tcagcgggcg
     1921 cgctccggct tcggcctcgt cgatgagggt gatgacggtc gcgtcgaaat cgtgctcgat
     1981 ggtgaacatc ggggcctcct ttggtcggac agacattcgc gtgatcgggg cggcggggca
     2041 aggcgtcggg gtttgcagcg gacaaggcag caagctaaac tgcctgaaaa ggcgcggcca
     2101 atcgcgtcct tatcttcggg gcagggggca tggatggcaa tggcgatcac gaggatttcc
     2161 tggaaagccc ttgtcctggg cggcgggctg ctgctggggg tggcggcctg cgcgccgatc
     2221 cagaatgccg cccccac
//
LOCUS       DTVW01000428            2517 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1529867, whole
            genome shotgun sequence.
ACCESSION   DTVW01000428 DTVW01000000
VERSION     DTVW01000428.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2517)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2517)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2517
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1529867"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1636)
                     /locus_tag="EYO87_05695"
     CDS             complement(<1..1636)
                     /locus_tag="EYO87_05695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020479467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 2 protein"
                     /protein_id="HIC65480.1"
                     /translation="MREIRTLNAGWRFAPGFDKAHIAASMAGIPVTLPHNAADLPLSY
                     FDEGDFQRPFTYQRQIAWEPAWQGRIVRLRFDAAMADATAWVNGVRVARHRDGYTPFT
                     VDLTGCFDGGSTLVTVRIDGSENPKIPPFGGRIDYLTYAGIYRDVWLEVLPERHIAAV
                     KIETPEVLADGKTVLARIEVTQPGPVEAVLSDASGRQIAHATGQGEIRLAGLEGITLW
                     SPDTPALYTLTLSLPDSGDRLSQRFGFRDARFTPEGFFLNGARVILRGLNRHQSFPYS
                     GYAQGRRSQQRDAEILRFDLACNIARTSHYPQSPWFLDRCDEIGLMVFEEIPGWQHIG
                     GPGWQDESVLNVERMIRRDWNHPSIVIWGVRINESPDAEDFYRRTNALARDLDPTRPT
                     GGVRCIPDSQLLEDVYTMNDFILGDFETPFSNRPRTALRDQQEVTGLPARVPYLVTEY
                     NGHMFPTKAGDPEHRQHEHVLRHLEVLDAAHDPAAGLAGCIGWCMFDYNTHKDFGAGD
                     RICHHGVMTIFREPKFAAHAYASQRDPGDGIVMEPVT"
     gene            complement(1639..>2517)
                     /gene="dgoD"
                     /locus_tag="EYO87_05700"
     CDS             complement(1639..>2517)
                     /gene="dgoD"
                     /locus_tag="EYO87_05700"
                     /EC_number="4.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018926188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactonate dehydratase"
                     /protein_id="HIC65481.1"
                     /translation="WDIKGKALGVPVHALLGGGQRDRIRVYSWIGGDRPGDTARMARE
                     CGDRGFTAVKMNGTEEMQFIDSHARIDAVLARVQAIRDEMGPDFGIGVDFHGRVHRPM
                     AKQLARELAPFNLMFIEEPVLSEHAEALREIANHCATPIALGERLYSRWDFKQILHGG
                     YVDIIQPDPSHSGGITETYRIAAMAEAHDVALALHCPLGPIALAANLQLDAVCYNAFI
                     QEQSLGIHYNKGSDLLDYLTNPDVFDYRDGFVAIPDGPGLGIDVNEDRVRQEAAGGHR
                     WRNPIWRHADGSFAEW"
BASE COUNT          429 a          803 c          835 g          450 t
ORIGIN      
        1 cggtgacggg ctccatcacg atgccgtccc cggggtcgcg ctggctggca taggcatggg
       61 cggcgaattt cggctcgcgg aagatcgtca tcacgccgtg atggcagatc cggtcgccgg
      121 caccgaaatc cttgtgggta ttgtaatcga acatgcacca gccgatgcag ccggccagtc
      181 ccgcggccgg gtcgtgagcc gcatccagca cctcgagatg gcgcaggacg tgttcgtgct
      241 ggcgatgttc gggatcgccc gccttggtcg gaaacatgtg cccgttatat tcggtcacca
      301 gatagggcac tcgggcgggc aggccggtga cctcctgctg atcgcgcagc gcggtgcgcg
      361 gccggttcga aaagggcgtc tcgaaatcgc cgaggatgaa atcattcatc gtatagacgt
      421 cttccagaag ctggctgtcg gggatgcagc gaacgccgcc ggtcggccgg gtcgggtcca
      481 gatcgcgcgc cagcgcgttg gtgcggcgat agaaatcctc tgcatcaggg ctttcgttga
      541 tgcgtacgcc ccagatcacg atcgagggat ggttccagtc gcgcctgatc atcctttcca
      601 cgttcagcac cgattcatcc tgccagccgg gcccgccgat atgctgccag ccgggaattt
      661 cctcgaagac catcagcccg atttcgtcgc agcggtccag gaaccacggg ctttgcgggt
      721 agtgcgaggt gcgcgcgatg ttgcaggcca gatcgaagcg caggatttcg gcgtcgcgct
      781 gctggctgcg cctgccctgc gcgtagccgg aatagggaaa gctctgatgc cggttcagtc
      841 cgcgcaggat gacgcgcgcg ccgttcagaa agaacccctc gggcgtgaag cgcgcgtcgc
      901 gaaagccgaa gcgttggctg aggcggtcgc cgctgtcggg cagggacagc gtcagcgtgt
      961 aaagcgcggg cgtatcgggc gaccacagcg tgatgccttc cagccccgca aggcggatct
     1021 cgccctggcc ggtggcatgc gcgatctggc ggccggacgc gtccgacagc accgcctcca
     1081 ccgggcccgg ctgcgtgacc tcgatccggg caaggaccgt cttgccgtcg gccagcacct
     1141 cgggcgtctc gatcttgacg gcggcgatgt ggcgttcggg cagcacctcc agccagacat
     1201 cgcgatagat cccggcatag gtgagatagt cgatgcgccc gccgaaaggc gggattttcg
     1261 gattttccga tccgtcgatt cgcaccgtca ccaaggttga gccgccatcg aaacagccgg
     1321 tcagatcgac ggtgaagggc gtatagccgt cgcggtgccg cgcgacccgc accccgttca
     1381 cccaggccgt ggcatcggcc atcgccgcgt cgaagcgcag cctgacgatc cggccctgcc
     1441 aggccggttc ccaggcgatc tggcgctgat aggtgaaggg gcgctgaaaa tcgccctcgt
     1501 cgaaatagct cagcggaaga tcggcggcgt tgtggggcag ggtgaccggt atgcccgcca
     1561 tcgacgccgc gatatgggcc ttgtcgaatc cgggcgcaaa gcgccagccg gcgttcaggg
     1621 tgcggatctc tctcatgcct accactccgc gaaactgcca tcggcgtggc gccagatcgg
     1681 attgcgccag cgatgccccc ccgccgcttc ctgccggacc cggtcttcgt tgacatcgat
     1741 gcccaggccg gggccgtcgg ggatggcgac gaagccgtcg cgatagtcga agacgtcggg
     1801 attcgtcaaa taatccagca aatccgatcc cttgttgtag tggatgccca gcgattgttc
     1861 ctggatgaag gcgttgtagc agaccgcatc cagttgcaga tttgcggcca gcgcgatcgg
     1921 ccccagcgga caatgcagcg ccagcgccac gtcatgcgct tcggccatgg cggcaatccg
     1981 gtaggtttcg gtgatgccgc ccgaatggct gggatcgggc tggatgatgt ccacatagcc
     2041 gccatgcagg atctgcttga agtcccagcg gctgtaaagc cgttcgccaa gcgcgatcgg
     2101 ggttgcgcaa tgattggcga tctcgcgcag cgcttcggca tgttcgctga gcacgggttc
     2161 ctcgatgaac atcagattga agggcgccag ctcgcgtgca agctgcttgg ccatggggcg
     2221 atggacgcga ccgtgaaaat ccacgccgat gccgaaatcg gggcccatct cgtcgcggat
     2281 cgcctgcacg cgggccagaa cggcgtcgat cctggcatgg ctgtcgatga actgcatctc
     2341 ttcggtgccg ttcatcttga ccgcggtaaa gccgcgatcg ccgcattcgc gcgccatgcg
     2401 cgcggtgtcg cccggccggt ctccgccgat ccagctatag acccggatcc ggtcgcgctg
     2461 ccccccgccc agcagcgcgt ggaccggcac cccaagtgcc ttgcccttga tgtccca
//
LOCUS       DTVW01000429            1030 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1530305, whole
            genome shotgun sequence.
ACCESSION   DTVW01000429 DTVW01000000
VERSION     DTVW01000429.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1030)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1030)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1030
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1530305"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..216)
                     /locus_tag="EYO87_05705"
     CDS             complement(<1..216)
                     /locus_tag="EYO87_05705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65482.1"
                     /translation="MTGNFSDRYGYRGADAEIAIREGAPDGLRFAVLAIAKEAGLGPK
                     SMRETICQVLREPPDPNNWPEYPNIWDE"
     gene            complement(216..992)
                     /locus_tag="EYO87_05710"
     CDS             complement(216..992)
                     /locus_tag="EYO87_05710"
                     /inference="COORDINATES: protein motif:HMM:PF02661.16"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65483.1"
                     /translation="MILNHKEAIQYVVDNLDDITLRRADLFAIHALLSDGLLGDPGMA
                     GRLRAGAVGISHSSYKPLDDAVTIAEEFDILIAKAAEITDPFEQSFFLLVHIPYLQAF
                     IDINKRTSRVASNVPLLKADLAPMSFLTMDDADYIDGLIGIYELNNVALLREVYIESY
                     LASATKYRVLRAEVETPEKAALAYREFVREAVRRCVLEFKAFRKDQVLAMATETGIPE
                     DDLDAVVAYVGQQVRGLHEGNVIRYRLRPADLDGLVQEQA"
BASE COUNT          204 a          301 c          312 g          213 t
ORIGIN      
        1 ctcatcccag atattcgggt attccggcca gttgttggga tcgggcggtt cgcggagcac
       61 ctggcagatg gtttcgcgca tggatttcgg cccaagaccg gcctccttgg cgatcgccaa
      121 caccgcaaag cgcagaccat caggtgcgcc ctcgcgaatg gcgatctctg cgtcagcgcc
      181 gcgatagcca taccgatccg aaaagttccc tgtcatcacg cctgttcctg cactaggccg
      241 tcaaggtccg ccgggcgaag ccggtagcgg atgacgttgc cttcatggag accgcgcact
      301 tgctggccaa cgtaggcgac cacggcgtcc aggtcgtcct cgggaatacc ggtttcggtg
      361 gccatggcca gaacttggtc cttccggaat gccttgaact ccagcacgca gcgcctgacg
      421 gcctcgcgca caaactcgcg gtaggcaagc gctgcctttt ccggtgtttc gacctcggcg
      481 cgcagcacgc ggtattttgt cgccgacgcg agatagcttt cgatatagac ttcgcgcagt
      541 agcgcgacat tgttcagctc gtagatacct atcagcccgt cgatatagtc ggcatcatcc
      601 atggtcagga acgacatggg ggcaagatcg gctttgagta gcgggacgtt ggaagcgact
      661 cgcgatgtcc gtttattgat gtcgatgaag gcttgcagat acgggatatg gacgagcagg
      721 aagaatgact gctcgaatgg atcggtgatc tctgccgcct tggcgatcag gatgtcgaac
      781 tcctcggcaa tggtgacggc atcatccaaa ggcttgtagc tggagtgcga aataccaacc
      841 gcgccggcac gaaggcggcc ggccatgccg ggatcgccga gcagcccgtc cgacagaagt
      901 gcatggatgg caaacaggtc ggcgcgccgc aaggtgatgt catcaagatt gtcgacaaca
      961 tactggatcg cctccttgtg gttcaggatc atcagcgctt ctttgcggtc cttgcccgca
     1021 gcttcctcgc
//
LOCUS       DTVW01000430            2141 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1530341, whole
            genome shotgun sequence.
ACCESSION   DTVW01000430 DTVW01000000
VERSION     DTVW01000430.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2141)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2141)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2141
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1530341"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..651
                     /locus_tag="EYO87_05715"
     CDS             <1..651
                     /locus_tag="EYO87_05715"
                     /EC_number="2.3.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010142295.1"
                     /note="catalyzes the formation of malate from glyoxylate
                     and acetyl-CoA; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate synthase G"
                     /protein_id="HIC65484.1"
                     /translation="QIGKGMWAKPDAMAEMLETKIGHPRSGANTAWVPSPTAATLHAL
                     HYHQVDVAARQADLSGSAMPDLDRLLTPALMDGAPAGRDQILREVENSCQGILGYVVR
                     WVDQGIGCSKVPDINDVQLMEDRATCRISAQYMANWLEQGLISRDEVEDALRRMAAKV
                     DRQNAGDPAYVPMAPDFDGPAFEAARDLIFGGAESPSGYTEPALHARRKQAKALRR"
     gene            complement(968..>2141)
                     /gene="uvrC"
                     /locus_tag="EYO87_05720"
     CDS             complement(968..>2141)
                     /gene="uvrC"
                     /locus_tag="EYO87_05720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010443578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="excinuclease ABC subunit C"
                     /protein_id="HIC65485.1"
                     /translation="ERAAALRDRIKALTAVQSVQAINPKGVAEADIVALHMEGGQACI
                     QVFFIRGNQSWGNRDFYPRLGGAESPDEVMQAFLLQFYDDKPPPRQILLSHAPEDPDL
                     TAEVMAERAGRKVEIAVPLRGEKFELVTNALRNARESLGRRMSESAAQAKLLEGVAKA
                     FDLPATPRRIEVYDNSHIMGTNAVGGMIVAGPDGFIKNQYRKFNIKGTEITPGDDFGM
                     MREVLTRRFTRLLKEDPDRQTEAWPDLLLIDGGAGQVSAVDGILADLGVEDIPVIGVA
                     KGVDREHGKEEFHRPNRRPFALRMNDPVLYFVQRLRDEAHRWAIGTHRARRAKSVMAN
                     PLDEIAGIGAARKRALLAHFGSAKAVSRAGLADLRAVEGISAAMAQKVYDHFHARG"
BASE COUNT          349 a          713 c          717 g          362 t
ORIGIN      
        1 cagatcggca agggcatgtg ggccaagccc gatgccatgg ccgagatgct ggagaccaag
       61 atcgggcatc cccggtccgg cgcgaatacc gcctgggtgc ccagcccgac cgccgcgacg
      121 ctgcacgcgc tgcattatca tcaggtcgat gtcgccgcgc ggcaggcgga cctgtccggc
      181 agcgccatgc ccgatctgga ccggctgctg acgcccgcgc tgatggatgg cgcacccgcc
      241 ggccgggacc agatcctgcg cgaggtggaa aattcctgcc aggggattct gggctatgtc
      301 gtccgctggg tcgatcaggg gatcggctgt tccaaggtgc ccgacatcaa cgacgtgcag
      361 ttgatggagg atcgcgccac ctgccggatc agcgcccaat acatggccaa ctggctggaa
      421 caggggctga tctcgcgcga tgaggtcgag gacgcgctgc gccgcatggc cgccaaggtc
      481 gaccggcaga acgcgggtga cccggcctat gtccccatgg cgccggattt cgacggcccg
      541 gcgttcgagg cggcgcgcga tctgatcttc ggcggtgccg aaagcccttc gggctatacc
      601 gaaccggcgc ttcatgcccg ccgcaagcag gccaaggcat tgcggcgctg agcccgcgac
      661 gccttggcga tgagcccggg aatggccgat tcccgggcag gacggaacgg cggacccggg
      721 caccgcaagg cgggtgcctg cggttgcgcc agggaacccg ccaaacggcc ttcgccgctc
      781 accctcacgc tgcgagcccc tgaccagccg tcaatagccg tgctgcaaca tttgacaacg
      841 atattcacat cgatcctgtc gaaacagaca gggccgcggt cgctgtcaga accctggccg
      901 ttccagtgcg gcctccgacc ggttcacggc gtggacgcca ccctactcgg cgagggtcgt
      961 cggacgatca gccgcgcgcg tggaaatggt catagacctt ctgcgccatc gcggccgaga
     1021 tcccctcgac cgcccgcaga tcggccaggc ccgcgcggct gacggccttg gcgctgccga
     1081 aatgcgccag cagcgcgcgc ttgcgcgcgg cgccgatgcc ggcgatttcg tccagcggat
     1141 tggccatgac cgatttcgcg cgccgcgcgc ggtgggtgcc aatggcccag cgatgcgcct
     1201 cgtcgcgcag gcgttgcacg aaatagagca ccgggtcgtt catgcgcagc gcaaagggac
     1261 gtcggttcgg gcggtgaaac tcctctttcc cgtgctcgcg gtcaacgccc ttggcgacgc
     1321 cgatgaccgg aatatcctcg acgcccagat cggccagaat cccatcgacg gcactgacct
     1381 gtccggcgcc gccgtcgatc agcagaagat cgggccaggc ctcggtctgc cggtcggggt
     1441 cttctttcag caggcgggtg aatcgtcgtg tcagcacctc gcgcatcatg ccgaaatcgt
     1501 cgcccggggt gatctcggtc cccttgatgt tgaacttgcg atactggttc ttgatgaagc
     1561 cgtcgggacc ggcgacgatc atgccgccga cggcattcgt ccccatgatg tggctgttgt
     1621 cataaacctc gatccggcgc ggggtcgcag gcagatcgaa ggccttggcg acgccttcca
     1681 gcagtttcgc ctgcgccgcg ctttccgaca tgcgccggcc caggctttcg cgggcattgc
     1741 gcagggcatt tgtcacaagc tcaaacttct cgccccgcag gggaaccgcg atctcgacct
     1801 tgcggccggc gcgttcggcc atgacttcgg cggtcaggtc gggatcttcg ggcgcgtggg
     1861 acagcaggat ctggcgcggc ggaggcttgt cgtcgtagaa ttgcagcagg aacgcctgca
     1921 tcacctcgtc cgggctttcg gcgccgccca gtcggggata gaaatcgcgg ttgccccagc
     1981 tttgattgcc gcggatgaag aagacctgga tgcaggcctg accgccttcc atgtgcagcg
     2041 caacgatatc ggcctcggcc acgcccttgg ggttgatggc ctggaccgac tgcacggcgg
     2101 tcagtgcctt gatccggtcg cgcaaggcgg cggcgcgttc g
//
LOCUS       DTVW01000431            1044 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1533806, whole
            genome shotgun sequence.
ACCESSION   DTVW01000431 DTVW01000000
VERSION     DTVW01000431.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1044)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1044)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1044
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1533806"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..687)
                     /locus_tag="EYO87_05725"
     CDS             complement(<1..687)
                     /locus_tag="EYO87_05725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family peptidase"
                     /protein_id="HIC65486.1"
                     /translation="MSKKLLNGLNASLERLLPEQRLFLRSDDSTRFLRLRPVTQLVGI
                     GGVTLGLGWMLVASSILVIDAVSSGSSREQMLRVQAAFEERLDQLSAERDARAAEAVA
                     AQSRFSVALDQVSQMQSQLLASEEKRRELQSGLTTVQSTLRDAIGERDGSLHAAGAAD
                     SPSGDADRSKDVTVALDILSGELRDTAQARTKAQKDAAEARGEAERMAAERDAIVARN
                     DEILAQVEDAM"
     gene            complement(875..>1044)
                     /locus_tag="EYO87_05730"
     CDS             complement(875..>1044)
                     /locus_tag="EYO87_05730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Cro/Cl family transcriptional regulator"
                     /protein_id="HIC65487.1"
                     /translation="YGDGLDLSRPRAFEPIGISCRICPRRDCHQRSVPPIDRPLRIPT
                     DRNGPLPYEIA"
BASE COUNT          177 a          343 c          331 g          193 t
ORIGIN      
        1 catggcatcc tcgacctggg ccaggatttc gtcgtttcgg gccacgatcg cgtcgcgttc
       61 ggcggccatt ctttcggcct cgccgcgcgc ttcggccgcg tccttctggg ccttggtccg
      121 tgcctgtgcg gtgtcgcgaa gctcgcccga caggatgtcc agcgcgacgg tgacatcctt
      181 gcttcggtcc gcatcgccgg acgggctgtc ggcggcgccg gcggcatgca gggatccgtc
      241 gcgctcgccg atcgcgtcac gcagggtcga ttgcacggtg gtcagaccgc tttgcagctc
      301 tcgccgtttt tcttccgatg ccagaagctg tgactgcatc tgcgaaacct gatccagcgc
      361 caccgaaaag cggctctgcg ccgccaccgc ctcggccgca cgggcatcgc gttccgcaga
      421 cagctgatcc aggcgttcct cgaacgcggc ctggacacgc agcatctgtt cgcgcgagga
      481 tccggaactg accgcatcga tcacgaggat cgaacttgcc accagcatcc agccaaggcc
      541 cagtgtcacc ccgccgattc cgacaagctg ggtcacgggg cgcaggcgca ggaagcgggt
      601 gctgtcatcg gatcgaagga acagacgctg ttcgggcaga agacgttcaa gtgaggcgtt
      661 caggccattc agcaacttct tcgacaagtc cagtcccccg gtcccgcgac cctgtttcca
      721 gtctggccgg atcgctttgg ttccattcgg aggtcggtaa acaagacctg tgccctgatg
      781 gcaacaggtc atccgccggg cgcgttgcag atgcgcggat acatgccttt gcgggcggga
      841 ttccgccgaa accggcagcc attcgccaaa gtcttcacgc aatttcatag ggaagcggcc
      901 cgtttcggtc ggttggtatg cgcaggggcc gatcgatcgg cggaaccgag cgctggtgac
      961 aatccctgcg cggacaaatc cggcacgaga tgccgatcgg ctcgaacgcc cgcgggcggg
     1021 acagatccag gccgtcgcca taga
//
LOCUS       DTVW01000432            1510 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1533931, whole
            genome shotgun sequence.
ACCESSION   DTVW01000432 DTVW01000000
VERSION     DTVW01000432.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1510)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1510)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1510
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1533931"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>1510
                     /locus_tag="EYO87_05735"
     CDS             <1..>1510
                     /locus_tag="EYO87_05735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutL"
                     /protein_id="HIC65488.1"
                     /translation="RHTTIIPVILRHPTRNIDQIDGSDLLAIRSFGFRGEALPSLGAV
                     GRLTITSRAQGCEGVAIAVAGGAAGPVRPAAANRGCVVELRDLFFATPARLKFMRSDR
                     AETQAVADTIRRLAMAEPWIGFSLSAEGREIFRADAEQGELFDALKLRLTRVMGRDFI
                     DNTVTIDAIRDDLTLTGFAALPTYSRGAAVAQHLYVNGRPVRDKLLTGALRAGYMDVL
                     AAGRHPAAVLYLTCDPHLVDVNVHPAKAEVRFRDPQAARGLIVSALRHGLASAGHRAS
                     STLGDATLAAFRPEPAAAQARRYQMHDRRPSAGAMRGALDMQAPIADPGFAEAPSARF
                     EGVPDDGPQDAPLGAARAQIHENWILAQTADGLVIVDQHAAHERLVYERLKAQAGASG
                     IASQALLIPEIVELSEADCNRILGVADDLACLGLVIEPFGGSAIAVRESPAMLTRLNV
                     PALIRDILDDLADQGASDRLRGRIDAVLSSMACHGSVRAGRRMGADEMNALLR"
BASE COUNT          222 a          521 c          517 g          250 t
ORIGIN      
        1 accgccacac cacaatcatc cctgtcattc tccgtcaccc tactaggaac attgaccaga
       61 tcgatggcag tgacctgctg gcgattcgca gcttcggctt tcgcggcgag gcgctgccgt
      121 cgctgggcgc cgtcgggcgg ctgacgatca cctcacgcgc gcaaggctgt gagggcgtgg
      181 cgatcgccgt cgcgggcggg gccgccggcc cggtccgtcc cgcggcagcc aatcggggct
      241 gcgtggtgga gttgcgcgat ctgttctttg ccacccccgc caggctgaaa ttcatgcgca
      301 gcgaccgcgc cgagacgcag gccgtggccg acacgatccg ccgccttgcc atggccgaac
      361 cctggatcgg gttttcgcta tcggcggaag ggcgcgagat cttccgcgcc gatgccgaac
      421 agggcgagct tttcgacgcc ctgaaactgc gcctgacgcg ggtgatgggc cgcgatttca
      481 tcgacaatac ggtcaccatc gacgccattc gcgacgacct gaccctgacc ggctttgccg
      541 ccttgccgac ctattcgcgc ggcgcggcgg tggcgcagca tctttatgtg aacggccgcc
      601 cggtccgcga caagctgctg accggcgcgc tgcgggcggg ctacatggat gtgctggctg
      661 cggggcgcca cccggcggcg gtgctgtatc tgacctgcga tccgcatctc gtggacgtga
      721 acgtccatcc tgccaaggcc gaggtccggt tccgtgaccc gcaggccgcg cgcggcctga
      781 tcgtcagcgc attgcggcac gggttggcca gcgcaggcca tcgcgcctca tcgacccttg
      841 gtgatgcgac gctggcggcc ttccggccag agccggcggc ggcacaggcg cgccgctatc
      901 agatgcacga ccgccgcccc tcggcaggcg ccatgcgcgg ggcgctggac atgcaggccc
      961 cgatcgccga tccgggcttt gccgaagcac cgtcggcgcg cttcgaagga gtgccggacg
     1021 acgggccgca ggatgccccg ctgggcgccg cacgggcaca gattcacgag aactggatcc
     1081 ttgcgcagac cgctgacggc cttgtcatcg tcgatcagca cgcggcccac gaacggctgg
     1141 tctatgaacg actgaaggcg caggccggcg caagcggcat cgcctcgcag gcgttgctga
     1201 tccccgaaat cgtcgaattg tccgaggccg attgcaaccg gattctgggc gttgccgacg
     1261 accttgcctg cctggggctg gtgatcgagc cgttcggcgg cagcgccatc gcggtgcgcg
     1321 aatcgccggc gatgctgacc cgcctgaacg ttccggcgct gatccgcgac atccttgacg
     1381 atctggccga tcagggtgca tccgaccgtc tgcgcgggcg gatcgacgcg gttctgtcgt
     1441 ccatggcctg ccatggctcg gtccgcgcgg gccgacgcat gggcgcggac gagatgaacg
     1501 ccctgctgcg
//
LOCUS       DTVW01000433            1533 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1535136, whole
            genome shotgun sequence.
ACCESSION   DTVW01000433 DTVW01000000
VERSION     DTVW01000433.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1533)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1533)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1533
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1535136"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..590)
                     /locus_tag="EYO87_05740"
     CDS             complement(<1..590)
                     /locus_tag="EYO87_05740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XRE family transcriptional regulator"
                     /protein_id="HIC65489.1"
                     /translation="MAVQKIYAGTSLRETRARSGLTQRVFAERLGISLPYLSQMENNH
                     RPISAGVLLRLAQEFGVDLTTLSAGDAERMVIDMQEALADPIFDTAPPLNDLRLAATN
                     APSLARAFLDLYRAHRQGQERLAALDEAIGAAGQNALSTPWEEVRDFFHYCDNYIDAV
                     DRAAERFACPDGVRADPWQAAVSALAKSGIRIREME"
     gene            complement(725..>1533)
                     /locus_tag="EYO87_05745"
     CDS             complement(725..>1533)
                     /locus_tag="EYO87_05745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HIC65490.1"
                     /translation="TMGMSVVPMIAPVIGGVLDEAFGWRANFAVMGLLGLVVLAVAWR
                     DLGETVRGGGIPLREQVANYPVLARSVRFWGYCGAATMASGSFFAYLGGAPFVGGQVF
                     GLSPAEVGYFFAAPSIGYLTGNFLSGRFSAMLGLNRMILYGTAISLAALFLSLITTLT
                     GLTNPWTFFGAIAVMGLGNGLVLPNANAGMMSVRPELAGTASGLGGALAVAGGAALSA
                     LAGALLQPGSGATPLLTIMVMSAAGSLASILWVLRRERRLGTIRHTTTGS"
BASE COUNT          296 a          527 c          496 g          214 t
ORIGIN      
        1 aattccatct cgcggatgcg gatgcccgat tttgccaggg ccgagaccgc cgcctgccat
       61 ggatcggccc gcacgccgtc ggggcaggcg aaccgttcgg ccgcacggtc caccgcgtcg
      121 atgtaattgt cgcaatagtg gaaaaagtcg cggacctcct cccacggggt cgaaagcgca
      181 ttctgcccgg ccgcgccgat cgcctcgtcc agggcggcca gccgctcttg tccctgccgg
      241 tgggcgcggt agaggtccag aaaggcgcgc gccagactgg gcgcgttcgt cgcggccaga
      301 cgcagatcat tcagcggcgg cgcggtgtcg aagatcggat cggccagggc ctcctgcatg
      361 tcgatgacca tgcgttccgc atcgcccgcc gaaagcgtgg tcagatcgac gccgaattcc
      421 tgtgccagcc gcagcagcac cccggccgag atcggacggt gattgttctc catctgcgac
      481 agatagggca acgagatccc cagccgttcc gcgaagaccc gctgggtcaa ccctgaccgg
      541 gcgcgggttt cgcgcaggga tgtacccgca tagattttct gaaccgccat gatcgccccc
      601 gttctttgca aagcaggctg tagcctttgc aaagggcgcc cggcaagcgc ccgcgacggt
      661 gcggggcggg ctggcggaaa ggatcgggcg aggttcgaca tggccgcacc atggaccaga
      721 aggattaaga tccggttgtg gtgtgccgga tcgtccccaa gcgtctttcg cgccgcagca
      781 cccacaggat cgaggccagc gagcccgccg ccgacatcac catgatggtc agcagcggcg
      841 tggcgcctga gccgggctgc aacagcgccc cggccagggc cgagagggcg gcgcctccgg
      901 cgacggccag cgccccgccc agaccgctgg cggtgccagc cagttccggg cggacgctca
      961 tcatgccggc attggcgttg ggcagaacca ggccgttgcc cagccccatg acggcaatcg
     1021 ctccgaaaaa tgtccaggga ttcgtcaggc ccgtcagcgt cgtgatcagc gacaggaaca
     1081 aagccgcgag gctgatcgcc gtgccgtaaa ggatcattct gttcagaccc agcatcgccg
     1141 agaagcggcc agacaggaaa ttgcccgtca ggtatccgat cgaaggcgcg gcgaagaagt
     1201 aacccacttc cgccgggctc aggccgaaga cctgcccgcc cacgaagggc gcgccgccca
     1261 gataggcgaa gaaactgccg gacgccatgg tcgccgcccc gcaataaccc cagaagcgaa
     1321 cggaccgcgc cagcacaggg taattggcga cctgttcgcg caaggggatg ccgccgccgc
     1381 gcacggtctc gcccagatca cgccaggcga cggcaagaac caccagtccc agcaggccca
     1441 tgacggcgaa attcgcgcgc cagccgaagg cctcgtccag aaccccgccg attaccggcg
     1501 cgatcatcgg caccaccgac atgcccatcg tga
//
LOCUS       DTVW01000434            1048 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1535980, whole
            genome shotgun sequence.
ACCESSION   DTVW01000434 DTVW01000000
VERSION     DTVW01000434.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1048)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1048)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1048
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1535980"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..232)
                     /locus_tag="EYO87_05750"
     CDS             complement(<1..232)
                     /locus_tag="EYO87_05750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD/FMN-containing dehydrogenase"
                     /protein_id="HIC65491.1"
                     /translation="MSETLTRDDLAPASESDLTGLVADCFARQRRLRIAGGGTRVEMT
                     MNRPRLNTAGLSGVVTYEPGEMTLIARAGTPLP"
     gene            complement(229..>1048)
                     /locus_tag="EYO87_05755"
     CDS             complement(229..>1048)
                     /locus_tag="EYO87_05755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014989407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HIC65492.1"
                     /translation="SEGQLGIVTEAILKILPRPEGARPVLIGFDDAEIAGQCVANIIR
                     SGVLPVAIEYMDEPCLRAVEDFAHAGYPDCAAVLIVEVEGSPDEIADQLARIRQIADA
                     LNPVEFRESRNADEALAIWKGRKSAFGAMGRLGDYICLDGTVPVGQLPHTLRRIGELS
                     RQHGLEVANVFHAGDGNMHPLILFDANQPGQLERAEAMGADILRLCVEVGGCLTGEHG
                     VGVEKRDLMTSQYDAADLAIQMEVKDLFDPGWLLNPSKVFPLDSSASHRSRAAE"
BASE COUNT          162 a          357 c          355 g          174 t
ORIGIN      
        1 cgggcagcgg cgtgcccgcg cgggcgatca gcgtcatctc gcccggctcg taggtcacga
       61 cgcccgacag cccggccgtg ttcagacgcg ggcggttcat ggtcatctcg acccgggtgc
      121 cgccgcccgc gatgcgcagg cgccgctgcc gggcaaagca atcggcgacg aggccggtca
      181 gatcggactc gctggccggg gccagatcgt cgcgggtcag cgtctcgctc attcggcggc
      241 cctgctgcgg tggctggcgc tgctgtccag cgggaatacc ttcgacgggt tcagaagcca
      301 gccgggatcg aacagatcct tcacctccat ctggatcgcc agatcggcgg catcgtattg
      361 gctggtcatc aggtcgcgct tttcgacgcc gacgccatgt tcgccggtca ggcagccgcc
      421 gacctcgaca cacaggcgca ggatgtcggc gcccatcgcc tcggcccgtt ccagctggcc
      481 gggttgattg gcgtcgaaca ggatcagcgg atgcatgttg ccgtcgcccg cgtggaagac
      541 gttggcgacc tccagcccgt gctgacgcga caattccccg atccgacgca gggtatgggg
      601 caactgtccc accggcaccg tgccgtcaag acagatgtag tcgcccagcc gccccatcgc
      661 gccgaaggcc gatttgcggc ccttccagat cgccagcgcc tcgtcggcat tgcggctttc
      721 gcggaattcg accgggttca gcgcatcggc gatctggcgg atgcgggcca gctggtcggc
      781 gatctcgtcg ggcgatccct cgacctcgac gatcagcacg gcggcgcaat cgggatagcc
      841 ggcatgggcg aaatcctcga ccgcgcgcag gcagggttcg tccatgtatt cgatggcgac
      901 gggcaacacg cccgaccgga tgatgttggc gacgcattgc ccggcgattt cggcgtcgtc
      961 aaagccgatc aggaccggac gcgcgccctc ggggcggggc aggatcttca ggatcgcctc
     1021 ggtcacgatg cccagctgac cttccgag
//
LOCUS       DTVW01000435            3003 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1538026, whole
            genome shotgun sequence.
ACCESSION   DTVW01000435 DTVW01000000
VERSION     DTVW01000435.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3003)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3003)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3003
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1538026"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..569)
                     /locus_tag="EYO87_05760"
     CDS             complement(<1..569)
                     /locus_tag="EYO87_05760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010391857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="paraquat-inducible membrane protein A"
                     /protein_id="HIC65493.1"
                     /translation="MSGAETGTGHRGPVMTAHRAGLLGCHSCGRVWPETRTRCARCGA
                     VLVPPDRRRLQHVWAWWFAGLILYIPANLFPMMSTQTFAGLQGNTESTIIEGVMELIH
                     YGNYDIAAIVFVASIVVPIAKFVAIAWLAMVAGRPATTEQAHTRLKIFEVVEFIGRWS
                     MIDVFVVAILSALVQLGFVASIHPGPAAAS"
     gene            complement(566..1249)
                     /locus_tag="EYO87_05765"
     CDS             complement(566..1249)
                     /locus_tag="EYO87_05765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="paraquat-inducible protein A"
                     /protein_id="HIC65494.1"
                     /translation="MSVIQGEYDLSTGEGLLACPRCDALHVEEELAEGETARCIRCGT
                     VLAKPRGGAFSQLIALSFTSMVLLLGAVFFPFLEISRMGFGNATSLFGVALAFADGVL
                     LPLVLAVLAMVIGLPVLRAFLLVYTLVPLAQGSAPYRHAATAFRLSETLRPWSMAEIF
                     VIGTSVALVKVAGLATVHLGPAFWAFCALILVNLASRGFMCQTTIWDAIEDAGQKTDG
                     REMVEVRQP"
     gene            complement(1302..>3003)
                     /locus_tag="EYO87_05770"
     CDS             complement(1302..>3003)
                     /locus_tag="EYO87_05770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011749094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HIC65495.1"
                     /translation="SLIQNLNLAREAERSGEIALMGRTASAAAGERALLQSALGSADA
                     LGPAVLESLDRPQVCADLMRNFIERSATYVYAGFTRLDGRSDCNSGANGGVAADMRQS
                     PAFKAFLAQPGTMVTSVERGIVSGRSVVLVMQPLYRDRELLGYVGLSLTHELLQSTHA
                     MAFATDGARIVTFNQRGEILTSDLSQDGSARDIIPRDTDLIGLLSRSETSFRAISGSG
                     QERVFTVVPVVPGLVYALGSWSPKIAGLGLFQLSRFGAVTIPIALWLASLGVAYFAVF
                     RLVLRHITVLRGQMRRFAIGNRSEPPPVLSDAPTEIADVSQTFHNMARILIRDEETME
                     EAVAEKTVLLKEVHHRVKNNLQLIASIINMQSRMIENSQARGVLRSVQDRVAALATIY
                     RNLYQAEHLDAVEADRLIGDIVNQLANASVGPGSDLNISTEIAPLTLLPDQAVPLTLL
                     ATEAFTNALKYAGTPAGGSAPWVSIRLSETESGRALLVIENSVGDASRDSDGDGTGLG
                     GQLIEAFSTQLDGEAEIQSMDDRYALRLEFTIVAPSMIGVSDPRDVVLTSAAREGSRH
                     "
BASE COUNT          583 a          986 c          986 g          448 t
ORIGIN      
        1 gacgcagcgg caggaccggg atggatcgag gcgacaaagc caagctgcac cagcgccgac
       61 aggatcgcga ccacgaagac atcgatcatc gaccagcggc cgatgaattc gaccacctcg
      121 aagatcttca gccgggtatg ggcctgttcg gtcgtggcgg ggcgtcccgc gaccatggcc
      181 agccaggcga tggccacgaa tttcgcgatc ggcaccacga tcgaggccac gaagacgatc
      241 gccgcgatgt cgtaattgcc ataatggatc agttccatca cgccttcgat gatggtggat
      301 tccgtgttgc cctgaagccc cgcgaaggtc tgcgtgctca tcatcggaaa caggttcgcg
      361 ggaatataca ggatcagccc ggcgaaccac caggcccaga catgctgcag ccggcgccgg
      421 tccgggggca ccagcacggc gccgcagcgg gcacagcgtg tccgggtttc gggccagacc
      481 ctgccgcagg aatggcaacc cagcaatccg gcgcggtggg cggtcatgac cgggccgcga
      541 tggccggttc cggtttcggc cccgctcatg gctgacggac ctcgaccatc tcgcggccat
      601 ccgtcttctg tccggcatcc tcgatggcgt cccagatcgt ggtctggcac atgaagccgc
      661 gcgaggcgag gttgaccagg atcagcgcgc aaaaggccca gaacgccggg cccagatgga
      721 ccgtggcaag accggccacc ttgaccagcg caaccgaggt gccgatcacg aagatctcgg
      781 ccatggacca gggtcgcagc gtctcggaca ggcgaaaggc ggtggcggcg tggcgatagg
      841 gcgcgctgcc ctgcgccagc ggcaccagcg tatagaccag cagaaaggcg cgcaggaccg
      901 gcaggccgat caccatggcc agcaccgcca gaaccagcgg cagcaacacc ccgtcggcaa
      961 aggcaagcgc cacgccgaac agcgaggtcg cattgccgaa tcccatccgc gagatttcga
     1021 gaaagggaaa gaacaccgcc cccagaagca acaccatcga ggtgaaggac agcgcgatca
     1081 actggctgaa cgcgccgccg cgcggcttgg ccagaaccgt gccgcagcgg atgcagcgcg
     1141 cggtttcgcc ctcggcaagc tcttcctcga catgcagcgc atcgcagcgc gggcaagcca
     1201 gaagcccctc gcccgtactc agatcgtatt cgccctggat cacgctcatg gaatgaaaga
     1261 tagcgtcgcc gcgcggcggc acaaggcgcg acagaccggc gtcaatgccg cgacccctcg
     1321 cgcgccgccg aggtcagcac gacatcgcgc ggatcggaca cgccgatcat gctgggcgcg
     1381 acgatcgtga attccagccg cagcgcatag cggtcgtcca tcgactggat ctcggcttcg
     1441 ccgtccagct gggtcgagaa cgcctcgatc aactgaccgc cgagaccggt gccgtcgcca
     1501 tcgctgtcgc gcgaggcatc gccgaccgag ttctcgatca ccagcagggc gcggcccgac
     1561 tcggtttccg acagccggat cgaaacccag ggcgcggaac cgccggccgg cgtcccggca
     1621 tatttcagcg cgttggtgaa agcctcggtc gcaagcagcg tcagcggcac ggcctgatcg
     1681 ggcagcagcg tcagcggcgc gatctcggtg ctgatattca gatcgctgcc cggcccgacc
     1741 gaggcattgg caagctggtt gacgatatcg ccgatcagcc ggtcggcctc gaccgcgtcc
     1801 agatgctcgg cctggtagag gttgcgatag atcgtggcca gggcggcaac ccggtcctgc
     1861 accgaccgca gcacgccgcg cgcctggcta ttttcgatca tccggctttg catgttgatg
     1921 atcgaggcga tgagctggag attgttcttc acgcggtgat gaacctcttt cagcagaacg
     1981 gtcttttcgg cgaccgcctc ctccatggtt tcctcgtctc ggatcaggat ccgggccatg
     2041 ttgtgaaagg tctggctgac atcggcgatt tcggtgggcg catccgacag gaccggcggc
     2101 ggctcggacc ggttgccgat ggcaaagcgg cgcatctggc cacgcagcac ggtgatatgg
     2161 cgcagcacca gacggaaaac ggcgaaatag gccacgccca gcgaggccag ccacaaggcg
     2221 atgggaatcg tcacggcgcc gaaacgcgac agctggaaca ggcccagccc cgcgatcttc
     2281 gggctccagc tgcccagggc atagaccagg ccgggcacga cgggaaccac ggtaaagacc
     2341 cgttcctgac cgctgcccga aatcgcgcgg aaactggtct cgctgcgcga cagcagcccg
     2401 atcaggtcgg tgtcgcgcgg gatgatgtcg cgggccgatc cgtcctggga cagatccgat
     2461 gtcaggattt cgccgcgctg attgaaggtc acgatccggg cgccgtcggt cgcgaaagcc
     2521 atcgcgtgcg tggattgcag caattcatgg gtcagcgaca ggccgacata gcccagcaat
     2581 tcccggtcgc gatacaatgg ctgcatcacc agaaccaccg accggccgct gacgatgccc
     2641 cgttcgacgg atgtaaccat cgtgccgggc tgggcgagaa aggccttgaa ggcgggcgat
     2701 tggcgcatgt cggcggcaac gcccccattc gcgccggaat tgcaatcgct gcgcccgtcc
     2761 agccgggtga agccggcata gacataggtg gcgctgcgtt cgatgaaatt gcgcatcagg
     2821 tcggcgcaga cctgtggccg gtccagcgac tccagcacgg cgggaccaag cgcgtcggcc
     2881 gaaccgagcg cgctttgcag cagcgccctt tcgcccgcgg cggccgatgc ggtgcggccc
     2941 atcagcgcga tctcgccgct gcgttcggct tcgcgcgcca ggttgaggtt ctggatcagc
     3001 gaa
//
LOCUS       DTVW01000436            4125 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1542490, whole
            genome shotgun sequence.
ACCESSION   DTVW01000436 DTVW01000000
VERSION     DTVW01000436.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 4125)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4125)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4125
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1542490"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..444)
                     /locus_tag="EYO87_05775"
     CDS             complement(<1..444)
                     /locus_tag="EYO87_05775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013960462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HIC65496.1"
                     /translation="MTPEEMSSRIVRYGELQPCKTAFIDAHTPGSNQKENFTIIGGGV
                     SESADQHVHITVPHGFNIGAAGQPPRCRNSLHSHRTAEVFFVLKGRWRFFWGRWGDAG
                     EVVLEEGDIFNIPTGIFRGFENIGTDYGMIMAILGGDDAGGGVIWA"
     gene            complement(476..1804)
                     /gene="hisD"
                     /locus_tag="EYO87_05780"
     CDS             complement(476..1804)
                     /gene="hisD"
                     /locus_tag="EYO87_05780"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013960457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HIC65497.1"
                     /translation="MTSEYLKRGRSESDRAEDDARTRAVVEATLTDIETRGDAAVREL
                     SEKFDSYSPPSFRLSESEIEAIMSKVSGADMADIRFAHEQVRNFAQAQRDSMRDIEVE
                     TLPGVILGHKNIPVQSVGCYVPGGKFPMVASAHMSVATASVAGVPRIIAATPPFNGQP
                     NPAVIAAMKIGGAHEIYVLGGIQAIGAMALGTETIDPVHLLVGPGNAFVAEAKRQLFG
                     RVGIDLFAGPTETMVIADDTVDAEMCATDLLGQAEHGYNSPAVLLTTSRSLAEGTLAE
                     VDRLLEILPTADTARASWDAYGEVILCSDHDAMLAVANDYASEHVQVMTDRDDWYLEN
                     MTCYGALFLGPRTNVANGDKVIGTNHTLPTKKAGRYTGGLWVGKYLKTHSYQRILTDE
                     AAAMIGAYGSRLCMLEGFVGHAEQCNLRVRRYGGTNVPYGEAAPRREAAE"
     gene            complement(1872..3167)
                     /locus_tag="EYO87_05785"
     CDS             complement(1872..3167)
                     /locus_tag="EYO87_05785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007427863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease"
                     /protein_id="HIC65498.1"
                     /translation="MTTAILFGTFFVLIAIGVPIGIALGTASLAAIAYIPFLNFDLYG
                     LGLISGMDSFTLIAVVLFTVAGNIMSQGGISRRLVAVADHLFGRAPGDLGTVTIIACL
                     FFAAISGTGSATVAAIGLAMIPALVDRGYDRAYSAAMVASAGGLGVMIPPSVVMIVYA
                     VAAGVSVTALFLAGVLPGLVVALTLIVYNISQRRLIAGDLPLPARHDWREKIRVLNQA
                     KLALLMPLVVLGGIYAGIVTPTESSAVAVVYALIVSVFVYRELPLSRLPGMLLESALL
                     VSAVLVIIGASVAFGRIIALEQIPLALAQFVTEVTQNRYVVIMAAIVLLLIVGTFLET
                     LAAIVILTPVLLPVLTRLGVDPVHFGIIMIVALAIGFVTPPLGANLFMAAQVGQISFD
                     KVARRILPWVITMIVALLIIAFVPWLSLGLPRLLLDYGP"
     gene            complement(3171..3665)
                     /locus_tag="EYO87_05790"
     CDS             complement(3171..3665)
                     /locus_tag="EYO87_05790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004408470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease"
                     /protein_id="HIC65499.1"
                     /translation="MLRMLEKYFEPTVIVTTLGAIIVFVFADVVARFAFSTSISVANE
                     LARLSFVYMIYFGVSYCIRERRHMRVTVLLDAAPPALRRWMLLTAELVFLGYSIAVSW
                     LGVVITQQSLERGKILSATQWPTAVLYAAIIFSGALSAARLMRSVYRIAVLGDTHLAP
                     QQDL"
     gene            complement(3688..>4125)
                     /locus_tag="EYO87_05795"
     CDS             complement(3688..>4125)
                     /locus_tag="EYO87_05795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017013483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein DctP"
                     /protein_id="HIC65500.1"
                     /translation="VPVPLAWGEIYSSLQQNLIDGQESALSSMVQERFFEVQDYVSLS
                     RHIYWPELWIADLNWWNGLDDADRDMITKAAAETVTLQRNLAAEANGSTLDELAAKGL
                     AINELPAEDRARMGETMNGAIEADIRAKVGNEFYDRFMAELQN"
BASE COUNT          800 a         1311 c         1299 g          715 t
ORIGIN      
        1 cgcccagatc acgcctccac ccgcgtcatc accgcccagg atcgccatga tcatgccgta
       61 atcggtgccg atattctcga acccgcggaa aatcccggtc gggatgttga agatgtcgcc
      121 ttcttcaaga acgacttcgc ccgcatcgcc ccagcgtccc cagaagaacc gccagcgtcc
      181 cttgaggacg aagaacactt cggccgtgcg atgcgagtgc aggctgttgc gacatctcgg
      241 cggttgtccg gcggcgccga tgttgaagcc gtgggggacg gtgatgtgca catgctgatc
      301 ggcactttcg ctgacgccgc cgccgatgat ggtaaagttc tctttctggt tcgaaccagg
      361 cgtgtgcgcg tcgatgaagg cggtcttgca gggctgcaat tcgccatagc ggacgatgcg
      421 cgaactcatc tcttcggggg tcattcctgt ttctcctgtc tgcgggtata gaggttcatt
      481 cggccgcctc gcggcgcggc gcggcctcgc cgtagggcac gttggtgccg ccatagcggc
      541 ggacgcgcag attgcattgt tcagcgtgtc ccacgaagcc ttccagcatg cacaggcgcg
      601 agccataggc tccgatcatc gccgcggcct cgtccgtcag gatgcgttga tagctgtgtg
      661 tcttcaggta tttgccgacc cacagcccgc cggtatagcg cccggccttc ttcgtcggca
      721 gcgtgtggtt ggtgccgatc accttgtcgc cgttggcgac gttggtgcgc ggccccagga
      781 acagcgcacc atagcaggtc atgttctcca gataccaatc gtcgcggtcg gtcatcacct
      841 gcacatgctc ggacgcataa tcattggcga ccgccagcat cgcgtcatga tcgctgcaca
      901 ggatgacctc gccataggcg tcccagctgg cccgcgcggt gtcggcggtg ggcaggattt
      961 cgagaagccg atccacctcg gccagcgtgc cttcggccag ggaccggctg gtggtcagaa
     1021 gcacggcggg cgaattgtag ccatgttcgg cctgtcccag caggtcggtc gcgcacatct
     1081 cggcgtccac cgtgtcgtcg gcgatgacca tggtctcggt cgggcccgcg aacagatcga
     1141 tgccgacgcg gccgaacaat tgccgcttgg cttcggcgac gaaggcgttg ccgggcccga
     1201 ccagcagatg caccgggtcg atggtttcgg tcccgagcgc catcgcgccg atcgcctgga
     1261 tcccgcccag gacatagatt tcatgcgcgc cgccgatctt catggcggcg atgacggccg
     1321 ggttcggctg gccgttgaaa ggcggcgtgg cggcaatgat gcggggcacg cccgcgaccg
     1381 aggcggtggc caccgacata tgggcgctgg cgaccatcgg gaacttgccg ccggggacat
     1441 agcagccgac cgactgcacg ggaatgttct tgtggcccag gatgacgccg ggcagcgtct
     1501 cgacctcgat atccctcatc gaatcgcgct gcgcctgcgc gaaattgcgg acctgttcat
     1561 gcgcaaaccg gatgtcggcc atatccgccc cggacacttt cgacatgatc gcctcgattt
     1621 cgctttccga caggcggaat gaaggcgggc tgtagctgtc gaatttctcg gacaattcgc
     1681 gcacggcggc atcgccgcgg gtttcgatgt ccgtcagcgt cgcctcgacc acggcgcgcg
     1741 tcctggcatc gtcttcagcc cggtcgcttt ccgatctgcc gcgcttcaga tattcgctgg
     1801 tcacgtttca atttccttct gtggcaaacc ggcggaggcc ggcatggatt ggtgagggcg
     1861 ggcgcaggcg gtcacgggcc gtaatccagc agcagccgcg gcagtcccag cgaaagccag
     1921 ggaacgaaag cgatgatcag cagcgcgacg atcatggtga tcacccaggg caggatccgc
     1981 cgcgccacct tgtcgaacga gatctggccg acctgcgccg ccatgaacag gttggcgcca
     2041 agcggaggcg tcacaaagcc gatggccagc gcgacgatca tgatgatgcc gaaatgaacc
     2101 ggatccacgc caagccgggt cagcaccggc agcagcaccg gcgtcaggat cacgatcgcc
     2161 gccagggttt ccagaaatgt cccgacaatc agcagcagca cgatggccgc catgatcacg
     2221 acatatcggt tctgggtgac ctcggtgacg aattgcgcca gggcgagggg gatctgttca
     2281 agcgcgatga tccggccgaa tgcgactgac gccccgatga tcaccagcac cgccgacacc
     2341 agcagcgccg attccagcag cattcccggc aggcgggaca ggggcagttc gcgatagacg
     2401 aagacactga caatcagcgc atagaccacc gcgacggcag aggattcggt tggcgtcacg
     2461 atcccggcat agatcccccc cagcaccacc aggggcatca gcagcgccag cttggcctga
     2521 ttgagaacgc gaatcttttc gcgccagtca tggcgggcag gcaatggcag atcgcccgca
     2581 atcaggcgtc gctggctgat gttgtagaca atcagcgtca gcgcgaccac cagccccggc
     2641 agcacgccgg ccagaaatag cgcagtcacc gacacccccg ccgcgactgc atagacgatc
     2701 atcacgaccg atggcgggat catcacgccc agcccgccgg cgctggcgac catggcggcc
     2761 gaataggcgc ggtcatagcc gcgatcgacc agcgccggga tcatcgcaag gccaatggcg
     2821 gcgaccgtgg ccgaaccggt gcccgagatc gcggcgaaga acaggcaggc gatgatggtg
     2881 acggtgccca gatcgcccgg agcccgccca aacaggtgat cggccacggc gaccagccgc
     2941 cgcgatatgc cgccctggct catgatgttg ccggcgaccg tgaacagcac cacggcaatg
     3001 agggtgaagc tgtccatgcc gctgatcagg cccagaccgt agagatcgaa attcaggaac
     3061 gggatatagg caatggcggc cagcgatgcc gtgccaaggg cgatgccgat gggaacaccg
     3121 atcgcgatca gcacgaagaa cgtcccgaaa aggatggctg tcgtcatcgc ctacaggtcc
     3181 tgctgcgggg ctagatgtgt gtcgcccagc accgcgatgc gatagacgga ccgcatcagc
     3241 cgcgccgcgc tgagcgcgcc cgaaaagatg atcgccgcat agagaaccgc tgtcggccat
     3301 tgtgtcgcag acaggatctt gccgcgttcc agcgattgct gggtaatgac cacgcccagc
     3361 caggagacgg caatcgagta gccaagaaag accagctcgg ccgtcagcag catccagcgt
     3421 cgcaatgccg gcggggccgc gtccaggagg actgtcacgc gcatgtggcg gcgctcgcgg
     3481 atgcagtagc tgacgccgaa atagatcatg tagacaaagc tgagccgcgc aagttcattc
     3541 gccaccgaga tcgaggtcga aaaggcgaac cttgccacca cgtcggcaaa cacgaagacg
     3601 atgatcgcgc caagcgtggt gacgatgacc gtgggctcga aatatttttc cagcatccgc
     3661 agcatgacag ccttctccgc atcgcgatca gttttgcagc tcggccatga accggtcgta
     3721 gaactcgttc ccgaccttgg cgcggatatc cgcctcgatg gcgccgttca tggtttcgcc
     3781 cattctggcg cggtcctcgg cgggcaattc gttgatcgcc aggcccttcg cggcaagttc
     3841 gtccagcgtt gagccattcg cctcggcggc gaggttgcgt tgcagggtga cggtttcggc
     3901 ggcggccttg gtgatcatgt cccggtcggc gtcgtccaga ccgttccacc agttcagatc
     3961 cgcaatccac aattccggcc agtagatgtg tcgcgacagc gaaacatagt cctgcacttc
     4021 aaagaacctc tcctggacca tcgagctgag cgcgctttcc tggccgtcga tcagattctg
     4081 ctgaagcgag gaataaattt cgccccaggc cagcggcacc ggaac
//
LOCUS       DTVW01000437            2136 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1543907, whole
            genome shotgun sequence.
ACCESSION   DTVW01000437 DTVW01000000
VERSION     DTVW01000437.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2136)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2136)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2136
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1543907"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..571)
                     /locus_tag="EYO87_05800"
     CDS             complement(<1..571)
                     /locus_tag="EYO87_05800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018001551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxythreonine-4-phosphate dehydrogenase"
                     /protein_id="HIC65501.1"
                     /translation="MRLALAIGDAGGVGPELAAKLLTHQDMRDRDVIVLGDARLLGLG
                     ARHGGLDLDLPTVAAADLPDRLPAGKVMVDLGNCPPGDLTLGRSSQGAGAASLQNFAA
                     ALRLAQAGVADAAMFTPFNKHSMRLARPAYVDEIGFIDATLGADRSGREFNVLEEVWN
                     ARVTSHIPLREVAASLSAERILSSIRLNVT"
     gene            complement(674..>2136)
                     /locus_tag="EYO87_05805"
     CDS             complement(674..>2136)
                     /locus_tag="EYO87_05805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012092546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DAK2 domain-containing protein"
                     /protein_id="HIC65502.1"
                     /translation="GVARAADRGGGVILGFGNYAGDVLNFGAAARRLQDEGIDARILA
                     VTDDVASAPADQRDKRRGVAGDLPVFKIAGAAAEEGMDIDAVVSVAQAANAATVSFGM
                     AFAGCTLPGQPGPLFTVDDGFVALGLGIHGEPGTRTEAMVAAADLARMLLTPLLAERP
                     DGHDGRVAVVLNGLGSTKYEELFVIWHHLSGLMQQEGLAIVEPEVGEFVTSLDMAGCS
                     LSITWLDDDLERLWRAPADAPAFRKGAVEPRRAEAPVVADIMREIPQGGTASRGTAVC
                     IADLIEALAASLAEAEEMLGRIDAQAGDGDHGQGMARGSRAAANAARHAAASGAGAAT
                     TLGLAGDAWADRAGGTSGALWGVALRAWGSALGDADAARAADVARGAEAALTAITDLG
                     GARPGDKTLVDAMVPFVEALGAGITTGLDLAQAWSKAADRATLAAEGTAKLRPRLGRA
                     RPLAERSLGHPDAGATSLALCARVVADRLSTRRRQV"
BASE COUNT          321 a          816 c          698 g          301 t
ORIGIN      
        1 ccgtgacgtt caggcggatg ctggacagga tgcgctcggc gctgaggctg gccgcaacct
       61 cgcgcagcgg aatatgagag gtgacgcggg cgttccacac ctcttccagc acgttgaatt
      121 cgcgcccgct gcgatccgcc cccagcgtcg cgtcgataaa accgatctca tcgacatagg
      181 cgggccgcgc cagtcgcatc gaatgcttgt tgaagggcgt gaacatcgcc gcatccgcca
      241 cgcccgcctg cgccagacgc agggccgcgg cgaaattctg cagcgaggcc gccccggccc
      301 cttggctcga gcgccccagc gtcagatcgc ccggcggaca attccccaga tcgaccatga
      361 cctttcccgc gggcagccga tcgggcaggt ccgccgccgc gacagtcggc agatcaaggt
      421 cgaggccccc gtgccgcgcg cccaagccca gcagccgcgc gtcgcccagc acgatcacgt
      481 cccgatcccg catgtcctgg tgggtcaaca gtttcgcggc cagttccggc cccacgcccc
      541 ccgcatctcc gatcgccaat gccagccgca tcttcggccc cttctcatgt tgacgcgcgt
      601 ttcaccgcgc gcggatgtcg tcttcgcagg ggccgccacg ggcgccggcc cgatccctgt
      661 ctttccgtcg ctgtcagact tgccgacggc gggtcgaaag ccggtccgcg acgacccttg
      721 cacacagcgc cagcgaggtt gcgcccgcgt cgggatgacc caggctgcgt tcggccagcg
      781 gacgcgcgcg gcccagcctt gggcgcagct tcgcagtgcc ctcggcggca agggttgcgc
      841 ggtccgccgc cttcgaccac gcctgggcaa ggtccagtcc tgtcgtgatg ccggcgccca
      901 aagcctcgac gaagggcacc atggcatcga ccagcgtctt gtcgcccggc cgggccccgc
      961 ccagatcggt gatcgccgtc agcgcggcct cggcgccccg ggccacatcg gccgcgcggg
     1021 ccgcatctgc atcgccaagg gcagagcccc aggcccgcaa ggccacgccc cacagcgccc
     1081 ccgacgtgcc gccggcgcgg tccgcccagg cgtcgccggc aagacccagt gtcgtggcgg
     1141 cgccggcacc ggaagccgcg gcgtggcgcg cggcgttggc cgcggcccgc gatccgcgcg
     1201 ccatgccctg cccgtgatcg ccgtcgccgg cctgcgcgtc gatgcggccc agcatttctt
     1261 ccgcttcggc cagagacgcg gccagcgcct cgatcaggtc ggctatgcag acggccgtgc
     1321 cccgcgatgc ggtcccgccc tgcggaatct cgcgcataat gtcggcgaca accggcgcct
     1381 cggcacgacg cggttcgacc gcgcccttgc gaaaggccgg ggcgtcggcc ggggcgcgcc
     1441 acagccgttc cagatcatcg tccagccagg tgatcgacag cgaacagccg gccatgtcga
     1501 ggctggtcac gaattcgccg acctcgggtt cgacgatggc cagcccttct tgctgcatca
     1561 ggcccgagag atgatgccag atcacgaaca gttcttcgta tttggtcgaa cccagcccgt
     1621 tcaggacgac ggcgacgcgc ccgtcatgcc cgtccgggcg ttcggccagc agcggcgtca
     1681 gcagcatccg ggccagatcg gccgccgcaa ccatggcttc ggtgcgggtg ccgggttctc
     1741 cgtggatgcc gaggccaagg gccacgaaac cgtcatcgac ggtgaacagc ggccctggtt
     1801 gacccggcag cgtgcagccg gcgaaggcca tgccgaacga gaccgtggcg gcattcgcgg
     1861 cctgtgccac ggaaaccacg gcgtcgatat ccatgccttc ctccgcggcc gcccccgcga
     1921 tcttgaagac cggaagatcg cccgccacgc cgcgccgctt gtcgcgctga tccgcggggg
     1981 cgctggccac gtcgtcggtg acggcaagga tgcgcgcgtc gatgccctcg tcctgcaacc
     2041 gccgggcggc ggcgccgaaa ttcagcacat cgcccgcata attcccaaag cccaggatca
     2101 cgccgccgcc acgatcggca gcgcgcgcca cgcccg
//
LOCUS       DTVW01000438            1613 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1543927, whole
            genome shotgun sequence.
ACCESSION   DTVW01000438 DTVW01000000
VERSION     DTVW01000438.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1613)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1613)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1613
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1543927"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..633
                     /locus_tag="EYO87_05810"
     CDS             <1..633
                     /locus_tag="EYO87_05810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009506293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine deaminase"
                     /protein_id="HIC65503.1"
                     /translation="DVPPVGRNSVKAPKVEARDFRSSGNRAETDVIGIIEGKIITRHL
                     HDEIAPKDGDKRPDPARDLIRIAVIERHGRNGNIATGFVRGFGMARGAIASTVCHDHH
                     NIAVVGADYADMALAANRLSQIEGGLVVAAEGEVLAELPLPVAGLMSLQPFETVRDRL
                     ARLRKAAKSLGVTLEEPFLQLAFLALPVIPALKITDRGMVDVERFEIISG"
     gene            complement(742..>1613)
                     /locus_tag="EYO87_05815"
     CDS             complement(742..>1613)
                     /locus_tag="EYO87_05815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010395270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase class II"
                     /protein_id="HIC65504.1"
                     /translation="STGGYADMHRVQSWIADFVGGPEAAKYRDIADRIRDAMAFMQAA
                     GVNSDTAHQLSKVDFYTSHEGLLLEYEEALARIDTTTGLPVAGSGHMIWIGDRTRQPD
                     GAHVEFCRGVQNPIGLKCGPTTTPDDLKVLMEKLNPDNEAGRLTLIARFGAGKVGDHL
                     PRLIRTVQEEGANVVWSCDPMHGNVIKSSSGYKTRAFDSILREVREFFGIHKAEGTIP
                     GGVHFEMTGKDVTECTGGVRAVTDEDLSDRYHTACDPRLNASQSLELAFLVAEELRNR
                     RETAAPGKDVKAG"
BASE COUNT          267 a          518 c          541 g          287 t
ORIGIN      
        1 gacgtgccgc ccgtcggccg aaactcggtc aaggccccga aggtcgaggc tcgtgatttc
       61 cggtccagcg gcaaccgggc cgaaaccgac gtgatcggaa tcatcgaagg caagatcatc
      121 acccgccatc tgcacgatga gatcgcaccg aaggatggcg acaagcggcc cgaccccgcg
      181 cgcgatctga tccggatcgc ggtgatcgag cggcatggca ggaacggcaa cattgccacc
      241 ggcttcgtca ggggcttcgg catggcgcgc ggggccatcg cctcgaccgt ctgccacgat
      301 caccacaata tcgcggtcgt cggcgcggat tatgccgaca tggcactggc ggcaaaccgg
      361 ctgtcgcaga tcgagggcgg tctggtggtt gcggccgagg gcgaggttct ggccgaattg
      421 ccgctgccgg tcgccgggct gatgagcctt cagcccttcg agacggtgcg cgaccggctg
      481 gcccgattgc ggaaggcggc gaaatcgctg ggtgtgacgc tggaagagcc gttcctgcaa
      541 ctggcctttc tggccctgcc ggtgatcccg gcactgaaga tcaccgatcg cggcatggtc
      601 gatgtggaaa ggttcgagat catctcgggc taggcctgcc ttcgctccgc ccgaaaggcg
      661 gatggacaga catcgccacg gtccggaacg acgacagccg ccgggcgtgc ggcgactgtc
      721 ctccgggcgc gggggccgtg ttcagcctgc cttcacgtcc ttcccgggcg cggccgtctc
      781 gcgccggttg cgcagttcct cggccaccag aaatgccagt tccagcgact ggctggcatt
      841 caggcgtgga tcgcaggcgg tgtgataacg gtccgacaga tcctcgtcgg tgacggcgcg
      901 gacaccgccg gtgcattcgg tcacgtcctt gccggtcatc tcgaaatgca cgccgccggg
      961 gatcgtgccc tcggccttgt gaatgccgaa gaattcgcgc acctcgcgca ggatcgaatc
     1021 gaaggcccgg gtcttgtagc ccgacgagga cttgatgacg ttgccgtgca tcgggtcgca
     1081 ggaccagacg acattggcgc cttcttcctg caccgtcctg atcaggcgcg gcagatgatc
     1141 gccgaccttg ccggcgccga agcgtgcgat cagggtcaac cggccggcct cgttgtcggg
     1201 gttcagcttt tccatcagca ccttcagatc gtcgggcgtg gtcgtcgggc cgcatttcag
     1261 gccgatcggg ttctgaacgc cgcgacagaa ttccacatgc gcgccatcgg gctgccgcgt
     1321 gcggtcgccg atccagatca tgtggcccga accggcgacc ggcagtccgg tcgtcgtgtc
     1381 gatccgggcc agcgcctctt cgtattccag cagcagaccc tcgtggctgg tatagaaatc
     1441 gaccttggac aattgatgcg ccgtgtcgga attgacaccc gccgcctgca tgaaggccat
     1501 ggcgtcccgg atgcgatcgg cgatgtcgcg gtatttcgcg gcctcggggc cgccgacgaa
     1561 atcggcgatc cagctttgga cccggtgcat gtcggcatag ccgccggtcg aga
//
LOCUS       DTVW01000439            3964 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1544710, whole
            genome shotgun sequence.
ACCESSION   DTVW01000439 DTVW01000000
VERSION     DTVW01000439.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3964)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3964)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3964
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1544710"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..175)
                     /locus_tag="EYO87_05820"
     CDS             complement(<1..175)
                     /locus_tag="EYO87_05820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2849 domain-containing protein"
                     /protein_id="HIC65505.1"
                     /translation="MSKAFTPSAARPGVITANDLREGHNVWMSDAGWSPDPAQATLYE
                     DEAIAELALLKAIG"
     gene            276..779
                     /locus_tag="EYO87_05825"
     CDS             276..779
                     /locus_tag="EYO87_05825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009818654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HIC65506.1"
                     /translation="MPEKTLDKGPSTRTSVRLDDVDRKILSLLQEDASLPLDQIAERV
                     GASKTPVWNRIRKLREAGVIRGQVTLLDPEALGLEACFFVLIRTSEHDRDWAARFLRA
                     LRERPEVIEAHRLAGDIDYILKVQVRNARAYDRFYQSLIGEVKIHNVTALLSMEEIKT
                     TTALPIP"
     gene            817..1128
                     /locus_tag="EYO87_05830"
     CDS             817..1128
                     /locus_tag="EYO87_05830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65507.1"
                     /translation="MSGIDTIWHYPRCSTSHFMLRALRGAGISVVMRDDCKQPLSKAE
                     LAAALTVLALAARDPGSGDPAPAMAANPAGTGRAADFAPGRARLHRPQQAVLDPLARA
                     A"
     gene            1128..2156
                     /locus_tag="EYO87_05835"
     CDS             1128..2156
                     /locus_tag="EYO87_05835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019294664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65508.1"
                     /translation="MTGAARDPVPAPACAATPNLLIVAQAGRLEYEAMILAASLRHSA
                     PGWTGRLLIAEPQPEGAWEGHETLIAPETREVLDWLGAEILPFTARHFGASYPHGNKI
                     EALKVLPAGEPFLFLDTDTLITGPLDRVAFDFSRPSASMRREGTWPIPPIYGPGYHGI
                     WKSLYDRFGLDLMPSLDLSQPDEHWERYLYFNAGWFHGADPVEFGARFRDWALAVRDE
                     PGDALACQSLDPWLDQIVLPLVIHSFGGGRPGPDLAGLDGAVTCHYRNLPLLYAKQSD
                     TAVEVLEAAVAHRRIKKRLREWTPAKRLIYQGKGREKVRTMFDRRALPTKEQPIRNQL
                     RKKGWWLV"
     gene            complement(2160..3197)
                     /gene="mgrA"
                     /locus_tag="EYO87_05840"
     CDS             complement(2160..3197)
                     /gene="mgrA"
                     /locus_tag="EYO87_05840"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015340091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-glyceraldehyde 3-phosphate reductase"
                     /protein_id="HIC65509.1"
                     /translation="MYQPDSHRYDRMTYRRCGRSGLKLPAISLGLWHNFGHDTPHQTK
                     RDICRKAFDLGITHFDLANNYGPPPGSAEEAFGEIRRQDFAGLRDQMIVSSKAGYPMW
                     DGPYGDWGSRKSLIASCDQSLRRMGLDYVDIFYSHRFDPDTPLEETMGALDHIVRSGR
                     ALYAGISSYNSQRTAEAAAILKDLGTPCVIHQPSYNMLNRWIENDGLLETLDDLGIGS
                     IVFTPLAQGMLTKKYLNGIPQDSRAAQGKSLSQDWLSDDMIRRLRGLNDLAAERGQSL
                     AQMAVAWVLRGGRVTSALIGASRPSQVEDCVGALQNTDFTEAELARIDDLSAGGDVNI
                     WARSSEGAGEE"
     gene            complement(3334..>3964)
                     /gene="ileS"
                     /locus_tag="EYO87_05845"
     CDS             complement(3334..>3964)
                     /gene="ileS"
                     /locus_tag="EYO87_05845"
                     /EC_number="6.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010396320.1"
                     /note="IleRS; catalyzes the formation of
                     isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since
                     isoleucine and other amino acids such as valine are
                     similar, there are additional editing function in this
                     enzyme; one is involved in hydrolysis of activated
                     valine-AMP and the other is involved in deacylation of
                     mischarged Val-tRNA(Ile); there are two active sites, one
                     for aminoacylation and one for editing; class-I
                     aminoacyl-tRNA synthetase family; some organisms carry two
                     different copies of this enzyme; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="isoleucine--tRNA ligase"
                     /protein_id="HIC65510.1"
                     /translation="FMTVELSAFYFDIRKDALYCDAPDSIRRRAARTVLDILYHRLVT
                     WLAPILPFTTEDVWLSRFPSEADSVHLHDFPVTPADWLNEPLAAKWDHLRRARRVVTA
                     ALEIRRADKTIGASLEAAPVVHVEDPEMLAALKSVHFADICITSDMVLTADPAPNEAF
                     RMAEAPGLGVVFERAEGEKCQRCWKILPDVGTHDHAGVCARCDAVLDGA"
BASE COUNT          674 a         1317 c         1270 g          703 t
ORIGIN      
        1 ggccgatcgc cttcagcagg gccagttcgg cgatcgcctc gtcctcgtac agggtcgcct
       61 gcgccggatc gggggaccag ccggcatcgc tcatccacac gttgtgacct tcgcgcaggt
      121 cgtttgcggt gatgacgcct ggcctcgcgg cacttggggt aaaggctttg ctcatggatt
      181 cggccctttc gttttcctct cacaatatag aattttgttc tggatctttg cgataggccg
      241 gggaaaataa ggacatgctg ccagaaggaa gcccaatgcc agaaaaaacg cttgataaag
      301 gcccttctac ccgaacgtcc gtccgcctgg atgatgtgga tcggaaaatc ctgtccctgc
      361 tgcaagagga tgccagcctg ccgctggatc agattgccga gcgggtgggc gcgtccaaga
      421 cccctgtctg gaaccggatc cggaagctgc gcgaagcggg cgtcatccgc gggcaggtga
      481 cgctgctgga tcccgaggcc ctgggtctgg aagcctgttt cttcgtgctg atccgcacca
      541 gcgaacatga cagggactgg gccgcgcggt tcctgcgcgc cctgcgcgag cgtcccgaag
      601 tgatcgaggc gcaccggctg gcgggcgata tcgactatat cctcaaggtg caggtgcgca
      661 acgcgcgggc ctatgaccgg ttctatcagt cgctgatcgg cgaggtgaag attcacaacg
      721 tgaccgcgct gctgtcgatg gaagagatca agacgaccac ggcccttccc atcccctgac
      781 cgccgggata ggtcttcgca aacggcaagg aaatccatgt ccggcatcga cacgatctgg
      841 cattatccgc gatgctcgac ctcgcatttc atgttgcggg ccctgcgtgg cgcgggcatc
      901 tcggtcgtga tgcgggacga ttgcaagcaa cccttgtcca aggccgaact cgcggcggcg
      961 ctgactgttc tggctctggc tgcgcgcgat ccgggatcgg gcgatccggc gccggccatg
     1021 gccgccaacc cggcggggac cgggcgtgcg gctgacttcg cgcccggccg ggcccgcctg
     1081 caccgcccgc agcaagccgt cctcgatcct ctggctcgag ccgcctgatg accggggccg
     1141 cgcgtgaccc ggttcccgcc cctgcttgtg cggcgacgcc aaatctgctg atcgtcgcgc
     1201 aggccggacg gctggaatac gaggcgatga tcctggccgc cagcctgcgc cattcggcac
     1261 ccggctggac cggccgcctg ctgatcgccg agccgcagcc cgagggcgcg tgggaaggcc
     1321 atgaaaccct gatcgcgccc gaaacgcgcg aggtgctgga ctggctgggc gccgaaatcc
     1381 tgcccttcac cgcccggcac ttcggcgcct cctatcctca tggcaacaag atcgaggcgc
     1441 tgaaagtgct gcccgccggc gagccgttcc tgtttctgga taccgatacg ctgatcaccg
     1501 gcccgctgga ccgcgtcgcg ttcgatttct cgcgcccctc ggcctcgatg cggcgcgagg
     1561 gcacatggcc gataccgccg atctacggcc ccggctatca cggtatctgg aaatcgctgt
     1621 atgaccggtt cggcctggac ctgatgccaa gcctcgatct gtcgcagccg gacgaacatt
     1681 gggaacgcta tctctatttc aacgcgggct ggttccatgg cgcggatccg gtcgaattcg
     1741 gcgcgcggtt ccgcgactgg gcgctggcgg tgcgcgatga accgggagac gcgctggcct
     1801 gccagagcct cgatccctgg ctggaccaga tcgtgctgcc gctggtcatc cacagtttcg
     1861 gcggcggccg tccgggcccg gacctcgccg ggctcgatgg cgctgtgacc tgccattacc
     1921 gcaacctgcc gctgctttac gccaagcaat ccgacacagc tgtcgaggtg ctggaagccg
     1981 cggtcgcgca tcgccggatc aagaagcgtc tgcgcgaatg gacgcccgcg aaacggctga
     2041 tctatcaggg caagggacgc gaaaaggtgc ggaccatgtt cgaccggcgg gccttgccca
     2101 cgaaggagca gccgattcgc aaccagttga ggaagaaggg ctggtggctg gtctgagccc
     2161 tattcctcgc ccgccccttc cgaggaccgc gcccagatgt tcacgtcgcc gcccgccgac
     2221 aagtcgtcga ttcgcgccaa ctcggcctcg gtgaagtcgg tgttctgcaa cgcgcccacg
     2281 caatcctcga cttgggacgg ccgcgatgcg ccgatcaacg cgctggtgac gcgcccgccg
     2341 cgcagaaccc aggcaacggc catctgcgcc agcgactgcc cgcgttcggc cgccagatca
     2401 ttcaggccgc gcaggcggcg gatcatgtcg tccgacagcc agtcctgcga cagcgacttg
     2461 ccctgcgctg cgcggctgtc ctgcgggatg ccgttcagat atttcttcgt cagcattccc
     2521 tgcgccagcg gcgtgaagac gatgctgcca atgcccagat cgtccagcgt ttccagcaga
     2581 ccgtcattct cgatccagcg gttcagcatg ttgtagctgg gctggtggat cacgcagggg
     2641 gtgcccagat ccttcaggat cgccgccgcc tcggccgtgc gctggctatt atagctggaa
     2701 atcccggcat agagcgcccg gcccgaccgc acgatatggt ccagcgcgcc catggtttcc
     2761 tccagcggcg tgtcgggatc gaagcggtgc gaatagaaga tgtcgacgta atccaggccc
     2821 attcgcctca gcgactggtc gcaggaagcg atcagcgact tgcggctgcc ccaatcgcca
     2881 tacgggccgt cccacatcgg ataaccggcc ttggaactga cgatcatctg atcgcgaaga
     2941 cccgcgaaat cctgacgccg gatctcgccg aacgcctctt ccgcgcttcc cggcggcggc
     3001 ccgtaattgt tcgccagatc gaaatgggtg atgcccagat cgaaagcctt gcgacagatg
     3061 tcgcgctttg tctgatgcgg tgtgtcatgg ccgaaattgt gccagagccc caggctgatc
     3121 gcgggcagtt tcagacccga gcgcccgcag cggcgatagg tcatccggtc gtagcggtgg
     3181 gaatcgggtt gatacatctg gtctctctcc tttgtcttgc ggcccggccg ctgcattccg
     3241 cccggatcgg acccgcggca tccggacgaa cgatcgcgcg gcgggatccg cccgcgaccg
     3301 ccaatccgcg ccagggcgcg gctcgccttt cgctcatgcc ccgtccagca ccgcgtcgca
     3361 gcgcgcgcat acacccgcat ggtcatgcgt cccgacatcg ggcagaattt tccagcaacg
     3421 ctggcatttc tcgccctcgg cgcgttcgaa gacgacgccc aggccgggcg cctcggccat
     3481 gcggaatgcc tcgttcgggg cgggatcggc ggtcaggacc atatccgagg tgatgcagat
     3541 atcggcgaaa tgcacggatt tcagcgccgc cagcatctcg ggatcctcga catggacgac
     3601 cggggcggcc tccagactgg cgccgatggt cttgtcggcc cgcctgatct ccagcgcggc
     3661 ggtcacgaca cggcgggcgc ggcgcaggtg atcccatttc gcggccaggg gctcgttcag
     3721 ccaatcggcc ggcgtcacgg ggaagtcgtg cagatgcacg ctgtcggcct cggacgggaa
     3781 gcgcgacaac cagacatcct cggtcgtgaa gggcaggatc ggcgccagcc atgtcaccag
     3841 gcgatgatac aggatgtcca gcaccgtccg ggccgcacgc cggcgaatgc tgtccggcgc
     3901 gtcgcaatac agcgcgtcct tgcggatgtc gaaatagaag gccgacagtt ccaccgtcat
     3961 gaaa
//
LOCUS       DTVW01000440            3521 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1546539, whole
            genome shotgun sequence.
ACCESSION   DTVW01000440 DTVW01000000
VERSION     DTVW01000440.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3521)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3521)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3521
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1546539"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..242)
                     /locus_tag="EYO87_05850"
     CDS             complement(<1..242)
                     /locus_tag="EYO87_05850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65511.1"
                     /translation="MARNFGGRFSPDGQRRDRQGDRPDQPRGAMRHRLESRPKWVTIG
                     AAPFLITAFFQPPVQMVAGLAAFGLIACAMWLTREGL"
     gene            complement(423..1406)
                     /locus_tag="EYO87_05855"
     CDS             complement(423..1406)
                     /locus_tag="EYO87_05855"
                     /EC_number="2.7.1.130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetraacyldisaccharide 4'-kinase"
                     /protein_id="HIC65512.1"
                     /translation="MSRAPDFWYLRPPTPLARLLSPLGAVYARETRRRLAGKARMRLD
                     IPVICVGNLNAGGTGKTPTVIHLQQHLLGLGIDAHVVSRGHGGRAKGPLRVDERRHDA
                     ALTGDEPLLMAAFGPVWVADDRQAGGRAACAAGAQAIILDDGFQDPALAHDLAIVVVD
                     AARGFGNGLCLPAGPLREPVVRGLARADLLLSIGDAAAQDRFVPPPDAPPHLRGTLAP
                     LQTGIDWQGHRVVAFAGIGHPEKFFATLASLGASILRAEALDDHQPFTPALLTRLETE
                     ARMRGAQLVTTEKDAARLPRDFRPRVMALPVRLALQDPALLDTALTRLFPG"
     gene            complement(1403..2620)
                     /locus_tag="EYO87_05860"
     CDS             complement(1403..2620)
                     /locus_tag="EYO87_05860"
                     /inference="COORDINATES: protein motif:HMM:PF04413.14"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-D-manno-octulosonic acid transferase"
                     /protein_id="HIC65513.1"
                     /translation="MRGPGLGGLGLWLHLRGPSRRTTDSPSLPPLTEGQALILHVSEG
                     HENAAQQIRTRLNATRRDVRILTIGQDGIADPGRDRGAAEALIAAARPGCLLLLGPDL
                     PGALITAAARDGVPVILGEARLDPQDMGWTLRAAMRRELLRRMQTILLTDPGSHEIAR
                     EMGLDPARLTMTGPVAAIHEPLPCAESEREAIAQLVRGRHSWLAAAIPENEDEAVLQA
                     HLAALRQSHRALLFWAPRDPRRAGALAERIEAAGLNVARRDQDEDPTDEIHVMLTDGL
                     AEMGLWYRLAPVSYLGGTLHGDDAAARHPFEPAALGSAIVHGPVTGRHPTEWQQLDGA
                     GAARQVANAAGLAAAMAELSQPELIAALARNAWTVSTGGADVTLRICQPVLAALDAAP
                     EGTADRPARATAP"
     gene            complement(2620..2865)
                     /locus_tag="EYO87_05865"
     CDS             complement(2620..2865)
                     /locus_tag="EYO87_05865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009506723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4170 domain-containing protein"
                     /protein_id="HIC65514.1"
                     /translation="MVQRLHLVFGGELIDPQSTQFRDTDDIHVVGIFPNYERAYNAWK
                     AEAQRTVDSAETRYFIAHLHRLRDEETPVSPTEELGG"
     gene            complement(3181..>3521)
                     /locus_tag="EYO87_05870"
     CDS             complement(3181..>3521)
                     /locus_tag="EYO87_05870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005862580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="EVE domain-containing protein"
                     /protein_id="HIC65515.1"
                     /translation="EEWDGVRNYQARNNMREMKKGDRGLFYHSNVGKEAVGIVEIVAE
                     AHPDSTTDDARWECVDVKAVERLPRPVPLAVVKAEPRLKDMALAGNSRLSVQPVTEAE
                     WAVMMELAGR"
BASE COUNT          522 a         1217 c         1225 g          557 t
ORIGIN      
        1 agcccctcgc gcgtcagcca catcgcgcag gcgatcaggc caaaggcggc gagcccggcg
       61 accatctgga ccgggggctg gaagaatgcg gtgatcagaa atggtgcggc gccgatcgtg
      121 acccatttcg gtcgcgattc cagccggtgc cgcatcgcgc cgcgcggctg atccggccgg
      181 tcgccctggc ggtcgcgccg ctgcccgtcc ggcgaaaacc gccccccgaa attccgcgcc
      241 atgttccgcc ctcctcaggc cgcgccggcc agtgaggcgt atagcgccag aagcaccagc
      301 aggtagaagc tgagccgttg catcgcgttg cgggacatgc ggttcctttc ctcggaaggc
      361 ccgttccggg cgttcgcatc ctatatcggc atcctcgcgg gaattgcaaa ggcgggccgg
      421 gctcagccgg gaaacaggcg cgtcaacgcc gtgtccagca aggccggatc ctgcaacgcc
      481 agtcgcaccg gcagcgccat gacccggggc cggaaatcgc gcggcagccg ggcggcatcc
      541 ttttccgtcg tgaccagttg cgcgccgcgc atccgcgcct cggtttccag ccgggtcagc
      601 agggccggtg tgaaaggctg atgatcgtcc agtgcctcgg cccgcaggat ggaggcgcca
      661 agagaggcca gcgtggcaaa gaatttctcg ggatgaccga ttccggcgaa ggccacgacg
      721 cggtgtccct gccagtcgat cccggtctgc agcggcgcca gcgttccgcg cagatggggc
      781 ggagcatccg gcggcgggac aaagcggtcc tgtgccgcgg catcgccgat ggaaagcagc
      841 agatcggcgc gggcaagacc ccggaccacg ggttcgcgca gggggccggc gggcaggcaa
      901 agcccgttgc cgaaacctcg tgccgcatcg accacgacga tggccaggtc atgcgccagc
      961 gccggatcct ggaagccgtc atcgagaatg atcgcctgcg cccctgccgc gcaggccgcc
     1021 cgcccgcctg cctgccggtc atcggccacc cagaccgggc cgaaggccgc catcagcagg
     1081 ggctcgtcgc cggtcagggc ggcatcgtga cgccgctcgt caaccctcag cggtcctttg
     1141 gcccggccgc catggccgcg cgagacgaca tgggcgtcga tccccagtcc cagaagatgc
     1201 tgttgcaggt gaatgacggt cggcgtcttg ccggtgccgc ccgcgttcag gttgccgacg
     1261 cagattaccg ggatgtcaag gcgcatgcgc gccttgcccg ccagcctgcg ccgggtttcg
     1321 cgtgcgtaaa ccgcgcccag cggcgaaagc agccgtgcaa gcggcgttgg cgggcgcaga
     1381 taccagaagt ccggtgcgcg gctcatggtg cggtcgcccg ggccggccgg tctgccgtgc
     1441 cttccggcgc cgcgtcgagg gctgccagga cgggctggca gatgcgcagc gtcacgtccg
     1501 cgccgccggt gctgacggtc caggcattcc gggccagcgc cgcgatcagt tcgggctgcg
     1561 acaattccgc catcgccgcc gccagaccgg ccgcattcgc gacctgccgc gccgcgccgg
     1621 ccccgtccag ttgctgccat tcggtcggat gccgccccgt gaccgggccg tggacaatgg
     1681 ccgaaccaag ggctgcgggt tcgaacggat gtcgtgcggc ggcgtcgtcg ccgtgcagcg
     1741 tgccgcccag ataggagacc ggggcaaggc gataccacag gcccatctcg gccagcccgt
     1801 cggtcagcat cacatggatt tcgtcggtcg ggtcctcgtc ctggtctcgg cgggcgacat
     1861 tgaggcccgc cgcctcgatc cgttcggcca gcgccccggc gcggcgcgga tcgcgcgggg
     1921 cccagaacag cagcgcccga tgcgattgcc gcagcgcagc cagatgcgcc tgcagcacgg
     1981 cctcatcctc gttttcgggg attgcggcgg ccagccatga atgccgcccg cgcaccagct
     2041 gcgcgatggc ctcgcgttcg gattcggcgc agggcagggg ttcgtggatc gccgccaccg
     2101 gcccggtcat cgtcagccgc gccggatcaa gccccatctc tctggcaatc tcgtggctgc
     2161 cgggatcggt cagcaggatc gtctgcattc gacgcagaag ttcacgccgc atcgccgcgc
     2221 gcagcgtcca gcccatatcc tgcgggtcca gtcttgcctc gcccaggatg accgggacgc
     2281 cgtcgcgtgc cgcggcggtg atcaatgcgc ccggcagatc cggacccaga agcagcaggc
     2341 agcccggcct tgccgccgcg atcagcgcct cggcggcgcc gcgatcacgg ccgggatcgg
     2401 cgatcccgtc ctggccgatg gtcaggatcc ggacatcgcg ccgcgtcgcg ttcagccggg
     2461 tgcggatctg ctgggcggcg ttttcgtgtc cctccgagac gtgcaggatc agtgcctggc
     2521 cttctgtcag gggcggcagc gagggggagt cggtggtccg ccgggacggg ccacgcagat
     2581 gcagccacag acccagcccg cctagccccg gaccccgcat cagccgccaa gttcctcggt
     2641 cgggctgacc ggcgtttcct cgtcgcgaag ccggtgcaga tgggcgatga aatagcgtgt
     2701 ctcggcgctg tccacggtgc gctgagcctc ggctttccag gcgttgtagg cgcgttcgta
     2761 gttcggaaag atgccgacga cgtgaatgtc gtcggtgtcg cggaactgcg tgctttgcgg
     2821 gtcgatcagt tcgccgccaa agacgagatg aagacgctgg accatgagac ctccttgtcg
     2881 tgaccggaat gtccgaacct agcgcggccc gcagaggaga tgaagcgggt tcggctaaaa
     2941 tgcagggcaa tcgggctttg ccttgccgcg gcctgccggg ctatcagtgg cgcgacacgg
     3001 ccagaaggcc ggatcctgat cccgtggtgc gcgcgatggt gtggcgctgc gcttgccggg
     3061 aaagaggggt tccggcgttc gcctgcgctg gaacccctca tggcttcgcg gctgctttcc
     3121 ggccggcgga tgcggcacgg gcggctggcc agggctgcgg gctggcgccg ggatgcgtca
     3181 tcagcggccg gcaagttcca tcatcacggc ccactcggcc tcggtgacgg gctggaccga
     3241 caggcggctg ttgcccgcca gggccatgtc cttcaatcgc ggctcggcct tgaccacggc
     3301 cagcgggacg ggtctgggca gtctctcgac cgccttcacg tccacgcatt cccagcgggc
     3361 gtcatcggtg gtgctgtcgg ggtgggcctc ggcgacgatc tcgacgattc cgacggcctc
     3421 ttttccgaca ttcgaatgat agaacagccc ccgatcgccc ttcttcatct cgcgcatgtt
     3481 gttgcgcgcc tgatagttgc gcacaccgtc ccattcctcg c
//
LOCUS       DTVW01000441            1571 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1547195, whole
            genome shotgun sequence.
ACCESSION   DTVW01000441 DTVW01000000
VERSION     DTVW01000441.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1571)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1571)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1571
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1547195"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            149..1177
                     /locus_tag="EYO87_05875"
                     /pseudo
     CDS             149..1177
                     /locus_tag="EYO87_05875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611590.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
BASE COUNT          329 a          454 c          504 g          284 t
ORIGIN      
        1 ccagtcggcc tgctcgggca gatgatcggc cagcttgtcg ccggtcggtg acgcgatcag
       61 ccattcgatc caggcagggg gtaatccccc cgaaagtagg gggctgcaaa gtagaatttt
      121 ctcggcaaga tgaacgagga gattctgaat gaagacaagc agatacattg aggcgcagat
      181 cctcgcgatc ctgcgtcagg ccgaaggcgg gatgccggtg gccgaactgt gccgggctca
      241 tggcacgagc tctgcgtcgt tttacaagtg gcgggcgcag tatggcggca tggacgcgtc
      301 cctgatcagc cagatgaagg tcatggaaga ggagaaccgg cggctgcggc ggatgtatgc
      361 ggacctgagc atgcgggccg atctgctcag cagtggcgtg ccacaaggtc agcattgcgc
      421 tggcctgccg ggcctttggt gtcagcgaga cctgctatcg ttatggccca aagttgcgcg
      481 ccgagaacga ggaaatcgcg gatcttctgg tcggcctgac ggacgccagg aagacctagg
      541 ggttcgggct gtgtttcctg cacctgcgca acgtcggagg tcatccgtgg aaccacaaac
      601 gcgtttaccg catctactgc gagctggaac tgaacctgcg gatcaagccc cgcaagcggt
      661 tgaagcggga caaacccgac gcgctggcgg tgccagatgc gccaaatgtg acatggtcga
      721 tggacttcat ggcggatcgg cttggcgatg gtcggcattt cggctcttga acgggctgga
      781 cgacttcaac cgagaaggct tgggcatcga ggtcgacttc tctctgccgg ccgaacgggt
      841 cgtccgaagc cttgaccgga tcatcgaatg gcgcggcaag cccggcacca ttcgggtcga
      901 caacggtccc gaatacatca gtggcaagct gctgatatgg gctgagaaac agggaattgc
      961 catccagcac atccaacccg gccagcccca gcagaacgcc cagatcgagc gctacaaccg
     1021 caccgagcgg catgaatggc tcgatcaata catcatcgaa tccatcgagg aggcccggga
     1081 cttcgccacg caatggctct ggacttacaa caacgaccgc ccgaacattg gcatcggcgg
     1141 cgtcacaccc gtccagaaac tgaaaatggc cgcgtgaatt ctacggatgc accccgctaa
     1201 gaatgggggg attaccggaa tatgtggaag ggttggcgac acactctgga tcacgagatt
     1261 atccatgctt tgcgcgacga tggcttgtgg aaccgtgacc gcggcatctt cacggccgat
     1321 gaatggcggg cgctggcccg aacggcgcgg gcggatcgcg atatccgatc ccgcgtcgag
     1381 gcggcatatc ccgatcttac tacggccgtc cagaccgaag aaatggttgc tgaactctat
     1441 gccgatcggg cacaggggcg ccgtgagcga ccgcagggca cgcttgcgcc ggccttcggc
     1501 cgcatccgat ccttcttccg cgccgtggct tctgcgctgc ggtcacgtcc gtcaaggtgg
     1561 tgtaatttcc c
//
LOCUS       DTVW01000442            2900 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1548795, whole
            genome shotgun sequence.
ACCESSION   DTVW01000442 DTVW01000000
VERSION     DTVW01000442.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2900)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2900)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2900
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1548795"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1290
                     /locus_tag="EYO87_05880"
     CDS             <1..1290
                     /locus_tag="EYO87_05880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019956714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage terminase large subunit family protein"
                     /protein_id="HIC65516.1"
                     /translation="SRIEQEFEASDQRRYFVPCPHCGAMQWLQFERLRWEKGRPETAA
                     YACKACDQLIAEHHKTAMLEAGEWRATAIAADPHHVGYHLSALYSPIGWKSWEQIARE
                     WLAAQGNDEMLRAARNTLLGETWVERGEAPEWQRLADRRKVFAAQIPESGLFLTAGAD
                     IQKDRIEVDIWAWGRGLQSWLVDHIVIPGGPDSPAAWAELTKLLGRTWLHAHGAVMPI
                     AKLAIDTGYEAAAVYAWARAQGFDQVVPVKGLEGFNRATPVSGPTFVDATVGGKRLRR
                     GARLWSVATATFKIETYRFLRLERPEEDQPFPPGMIHLPDWADSEWLKQLVAEQLVTV
                     RNKRGYARQEWQKLRERNEALDTRVYARAAAWIMGADRWDERMWRQLEDQAGVTAPET
                     TATDAAEPTTDPPARQAGTPPTTPRRKRQTYTPRFMR"
     gene            1294..1506
                     /locus_tag="EYO87_05885"
     CDS             1294..1506
                     /locus_tag="EYO87_05885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008032462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65517.1"
                     /translation="MEIDRMRALLSALQEARFSGLRSVSYDGKTLTYGSDAELANAIA
                     DLEARIGRASGTSRRRRWGTIATKGL"
     gene            1510..>2900
                     /locus_tag="EYO87_05890"
     CDS             1510..>2900
                     /locus_tag="EYO87_05890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008032463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage portal protein"
                     /protein_id="HIC65518.1"
                     /translation="MAFDAIRARLGAIIGGFDAAQSHRRLRGFRASRAHVNTLIAGAG
                     ETITARARWLVRNNGYASGAVEAFASNVIGDGIKPSSSIADAAQKEALQKLWLGWTDD
                     ADAEGLTDFYGLQRRAARELFLAGEVFLRLRPRRTEDGLSVPLQLQMLPSEMLPMDRN
                     RELPGGGAIRQGIEFDGIGRRVAYHLLRRHPGDMTDPGLVGETVRVPASEIVHVLDPV
                     EAGQLRGVSRFAPAIVKLFTLDLYDDAELERKKTAAMFAMFITSPAPETPLEPAEEDL
                     EVEPGQVVRLDPGEDVSTPATPDSGATYEPFQYRTLLQIAAALGIPYPYLTGDAARGN
                     FSNTRVALLDFRRRVSAIQHSVIVHQLCRPVWQRWLDLAVLAGAVDLPGYDRDRRVFQ
                     AVSWLPTRWDWVDPMKDASAEILQIEAGLKSRSQAISERGYDAEQVDREIAAKRKREA
                     ALGLDFRRPGSPA"
BASE COUNT          482 a          960 c          993 g          465 t
ORIGIN      
        1 agccggatcg agcaggaatt cgaggcgtcc gatcagcggc gctacttcgt gccctgcccg
       61 cattgcgggg ccatgcaatg gttgcagttc gagcgcctgc gctgggagaa gggccgaccc
      121 gagaccgccg cctacgcctg caaggcctgc gatcagctga tcgccgagca tcacaagacc
      181 gccatgctgg aggcgggcga atggcgcgcg acggccattg ccgccgatcc gcatcatgtc
      241 ggctatcacc tgtccgcgct ttactcgccc atcggctgga agagctggga acagatcgcc
      301 cgggaatggc tggccgcgca gggcaatgac gagatgctgc gcgcggcccg gaatacgctt
      361 ctgggcgaga cctgggtcga gcgcggcgag gcgccggaat ggcagcggct ggccgaccgg
      421 cgcaaggtgt tcgcggcgca gatccccgag agcggtctgt tcctgaccgc cggtgccgat
      481 atccagaagg accggatcga ggtcgatatc tgggcctggg ggcgcggatt gcagagctgg
      541 ctcgtcgatc acatcgtcat tcccggcggc cccgacagcc cggcggcctg ggcggagttg
      601 acgaaactgc tcggccggac atggcttcac gctcatggcg cggtgatgcc catcgcaaaa
      661 cttgccatcg ataccggcta tgaggcggcg gcggtctatg cctgggcgcg ggcgcagggg
      721 ttcgatcagg tcgtgccggt caagggtctg gaaggtttca accgggcaac gccggtctcc
      781 gggccgacct ttgtcgatgc gacggtgggc gggaagcgat tgcgtcgggg tgcccggctc
      841 tggtctgtgg ccaccgccac cttcaagatc gagacctatc gtttcctgcg gctggaacgg
      901 cccgaagagg atcaaccctt tccgccgggc atgatccatc tgccggactg ggccgacagc
      961 gaatggctga agcagctggt ggccgagcag ttggtcacgg tccgcaacaa gcgcggctat
     1021 gcccggcagg aatggcagaa actgcgggaa cgcaacgagg cgctcgacac ccgcgtctat
     1081 gcccgtgccg ccgcctggat catgggcgcg gatcgctggg acgagcgcat gtggcggcag
     1141 ctggaggatc aggctggcgt cacggcaccc gagaccacag ctaccgacgc cgctgaaccg
     1201 accaccgacc cgcctgcccg tcaggcaggc acgccaccaa ccacgccacg ccgcaagcgg
     1261 cagacttaca caccgcgttt catgaggtga gagatggaga tcgaccggat gcgggcgctg
     1321 ctatcggccc tgcaggaggc ccggttcagc ggcctgcgca gcgtcagcta tgacggcaag
     1381 accctgacct atggctccga tgcagaactg gccaatgcca tcgccgatct ggaagcccgg
     1441 attggacggg catccggcac cagccgccgt cggcgctggg gcactattgc cacgaagggg
     1501 ctctgaacca tggcattcga cgccatccgc gcacgcctcg gcgcgatcat cggcgggttc
     1561 gatgcggcgc agtcccatcg ccgcctgcgt ggcttccggg cctcccgtgc ccatgtgaac
     1621 acgctgatcg cgggcgcggg cgagaccatc accgcgcggg cccgctggct ggtgcggaac
     1681 aacggctatg cctccggcgc cgtggaagct ttcgccagca atgtgatcgg tgacgggatc
     1741 aagccatcgt cgtccatcgc ggatgcggcg cagaaggagg cgcttcaaaa gctctggctc
     1801 ggctggaccg acgatgccga tgccgagggt ctgacggatt tctacgggtt gcagcgccgc
     1861 gccgcgcgag aactgtttct ggcgggcgag gtgtttctgc gactccgccc gcgccgcacc
     1921 gaggacgggc tgtccgtgcc gctgcagctg cagatgctgc cctcggagat gctgccgatg
     1981 gatcggaacc gcgaactgcc cggcggcggg gcgatccgtc agggcatcga attcgacggg
     2041 atcgggcgcc gcgtcgccta tcacctgctc cgccgtcatc ctggcgatat gaccgatccg
     2101 gggttggtgg gcgaaacggt ccgcgtcccg gcctcggaga tcgtccatgt gctggacccg
     2161 gtcgaggccg gtcagctgcg cggggtgtcg cgcttcgccc cggccatcgt gaagctgttc
     2221 accctcgatc tctatgacga tgccgaactg gagcggaaaa agacggcggc gatgttcgcg
     2281 atgttcatca cctcgcccgc cccggaaacg ccgctggaac cagccgaaga ggatctggag
     2341 gtcgaacccg gtcaggtcgt ccgcctcgat ccgggcgagg atgtctcgac ccccgccacg
     2401 ccggattcgg gcgcgaccta tgagccgttc caataccgca ccttgctgca gatcgcggcg
     2461 gcgctgggca ttccctaccc ctacctgacc ggcgatgcgg cgcgcggcaa tttctcgaac
     2521 acgcgcgtcg cactgctgga ttttcggcgt cgcgtctcgg cgatccagca cagcgtcatc
     2581 gtccatcagc tctgccgccc ggtctggcag cgctggctcg atctggcggt actggcgggc
     2641 gccgtcgatc tgcccggcta tgaccgcgac cggcgagtct tccaggcggt cagctggctg
     2701 ccgacgcgct gggactgggt cgatccgatg aaggatgcct cggccgagat cctgcagatc
     2761 gaagccggtc tcaaatcccg cagccaggcc atttccgagc gcggctatga cgccgaacag
     2821 gtcgaccgcg agatcgccgc caaacggaaa cgcgaagcgg cgctgggcct cgatttccgc
     2881 cgccccggct cgcccgcgca
//
LOCUS       DTVW01000443            1467 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1548822, whole
            genome shotgun sequence.
ACCESSION   DTVW01000443 DTVW01000000
VERSION     DTVW01000443.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1467)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1467)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1467
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1548822"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..692
                     /locus_tag="EYO87_05895"
     CDS             <1..692
                     /locus_tag="EYO87_05895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009803535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
                     /protein_id="HIC65519.1"
                     /translation="TAQEADKILLLARTTPLEDVKKPTEGLSLFYTDLDRSFVTVREI
                     EKMGRKCVDSNELFIDGLPIPAGDLIGEEGQGFRQILHGLNPERVLIAAEAVGIGRNA
                     LRRAADYANERVVFGRPIGQNQGVQHPLAASWAELEAANLMAMHAGALYDAGKPCGNE
                     ANAGKYLAAEAAVKATQTAQLTFGGFGYAKEYHVERLVREAILFRIAPVTPQLVLSFI
                     AEHALGLPKSY"
     gene            731..>1467
                     /locus_tag="EYO87_05900"
     CDS             731..>1467
                     /locus_tag="EYO87_05900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009803534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-binding protein"
                     /protein_id="HIC65520.1"
                     /translation="MDAIFNPRSVAVIGASSDPKRIGGRPVDFLKRHGFDGPILPINP
                     KSPEVQGLTAYPSISEAPTTPDLAVIALPAPLAVQAVEQCAAQGVRGAVIFSSGFSEV
                     DADGAALQARMVDIAREGGMRLVGPNCLGIANVRHNLYATFTPGVEKHLPKPGGVSIV
                     SQSGAFGSYCMTLVRMRGLGVNIWATTGNSCDVDFADAVAYCAQDDDTRVIMGYLEGA
                     TDRDRLVEALELARARGKPVVMMKVGR"
BASE COUNT          289 a          438 c          476 g          264 t
ORIGIN      
        1 caaccgccca ggaggccgac aagatcctgt tgctggcgcg cacgaccccg cttgaggacg
       61 tcaagaaacc gacagaagga ttaagccttt tttacaccga tctggaccga tctttcgtca
      121 ccgtgcgcga gatcgaaaag atgggccgca aatgtgtcga ctcgaacgaa ctgttcatcg
      181 acgggcttcc gatccccgcc ggggatctga tcggcgaaga aggccagggc tttcgtcaga
      241 tcctgcacgg gctgaacccc gaacgggttc taattgccgc tgaagcagtc ggaatcgggc
      301 ggaatgcgct tcggcgcgcc gcggattacg ccaatgagcg cgtcgttttt ggcagaccaa
      361 tcggtcagaa tcagggtgta cagcaccccc tggccgccag ctgggcggaa ctggaggcgg
      421 ccaacctgat ggcgatgcac gccggcgcgc tctacgacgc gggcaagccc tgcggaaatg
      481 aagccaacgc aggaaaatat ctggccgccg aagcggcggt gaaggcgaca cagaccgcgc
      541 agctgacctt cggggggttc ggatacgcca aggaatacca tgtcgagcgt cttgttcgcg
      601 aggccatcct gttccgcatc gcgccggtca ccccgcagct ggtgctttcg tttatcgcgg
      661 aacatgccct cggcctgcca aaatcctact agttacgaac atcaaaggaa gtcccatgcg
      721 aattcatgga atggatgcca ttttcaaccc tcgctcggta gcggtgattg gcgcctcaag
      781 cgatcccaag cgcatcggcg gaaggccggt ggattttctc aagcggcacg gtttcgacgg
      841 cccgatcctg cctatcaacc cgaaatcgcc agaggtgcag ggcctgacgg cgtatccgtc
      901 gatctcggag gcacccacga caccggacct ggccgtgatc gcgctgcccg cgccgctggc
      961 cgttcaggcg gtcgaacagt gcgcggccca aggtgtgcgg ggggcggtga tcttcagttc
     1021 ggggttctcg gaggtcgatg ccgacggggc cgcccttcag gcgcgcatgg tcgacatcgc
     1081 gcgcgagggc ggcatgcggc ttgtggggcc gaactgcctt ggcatcgcga atgtgcgcca
     1141 caacctctat gcgacattca cgcccggggt cgaaaaacac ctgccaaaac ccggcggcgt
     1201 gtcgatcgtc agtcaaagcg gcgcgttcgg ctcgtattgc atgacgctcg ttcgaatgcg
     1261 cggacttggg gtcaatatct gggcgacgac gggcaattcc tgcgatgtcg attttgccga
     1321 tgccgtggcc tattgcgcgc aggatgacga tacccgcgtc atcatgggat atctcgaagg
     1381 ggcaaccgat cgcgacaggc tggtcgaggc acttgagctg gcgcgggccc ggggaaagcc
     1441 ggtggtcatg atgaaggtcg ggcgcag
//
LOCUS       DTVW01000444            1262 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1551465, whole
            genome shotgun sequence.
ACCESSION   DTVW01000444 DTVW01000000
VERSION     DTVW01000444.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1262)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1262)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1262
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1551465"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..383)
                     /locus_tag="EYO87_05905"
     CDS             complement(<1..383)
                     /locus_tag="EYO87_05905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65521.1"
                     /translation="MSWDFEEEDRDWPLPMADRRSLFDPQPWREAQADCAFALAQAGL
                     AAGRLESRLTPMTGPARAGALRRLALLEAEAMLWAQGSPLARHEIGLDLMAARAGTDL
                     DAMAQARWAVRRLEGQGDPADLRGFL"
     gene            complement(401..>1262)
                     /locus_tag="EYO87_05910"
     CDS             complement(401..>1262)
                     /locus_tag="EYO87_05910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010397811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AbrB family transcriptional regulator"
                     /protein_id="HIC65522.1"
                     /translation="MRTFLGVAVGASITPEVLAGLPEIAASLALVPIFIAIIAMVGYP
                     LFRRVFGFDHATAWYAAMPGGLQDMLVFGEEAGGDVRALSLIHATRVLVIVTVAPLIM
                     RIYWGVDLARPPGASIAGYSASQIALMVAAGFLGWKLAERAGLFGASILGPLILTMIL
                     SLSGIVQNRPPAEIIQAAQFFIGIAVGVKYVGISARELRIDVTAGLVYAVVLALISLV
                     FIEGIVTLGLAPGLEAFLAFLPGGQAEMTVIAIIAGADLAYVVSHHLLRIMIVILLAP
                     IVARLFRRRE"
BASE COUNT          234 a          481 c          396 g          151 t
ORIGIN      
        1 agaaagccgc gcagatcggc cggatcgccc tgtccttcca gccgccggac ggcccaccgc
       61 gcctgcgcca tcgcatccag atcggtgccg gcgcgggcgg ccatcaggtc caggccgatc
      121 tcgtgccggg ccagcggcga gccctgcgcc cacagcatcg cctcggcctc cagcagcgcc
      181 agccgcctca gcgcgccggc ccgcgccggt cccgtcatcg gcgtcagccg cgattccagc
      241 cgcccggcgg ccagcccggc ctgcgccagt gcaaaggcgc aatcggcctg cgcctcgcgc
      301 cacggctgcg gatcgaacag gctgcgccga tccgccatgg gcagcggcca gtcccgatcc
      361 tcttcctcga aatcccagct catcggggca ggatacgcgc ctattcgcgc cgccggaata
      421 gccgcgcgac gatcggcgcc aacaggatca cgatcatgat ccgcagcagg tggtggctga
      481 cgacataggc cagatcggcg ccggcgatga tcgcgatcac ggtcatctcg gcctgcccgc
      541 ccggcaggaa ggccagaaac gcctccagcc ccggcgccag gcccagcgtc acgatcccct
      601 cgatgaaaac caggctgatc agcgccagca cgacggcata aaccagcccc gccgtcacgt
      661 cgatgcgcaa ttcgcgcgcc gagatgccga catatttcac ccccaccgcg atgccgatga
      721 agaactgcgc cgcctggatg atctcggccg gggggcggtt ctggacgatg ccgctcagcg
      781 acaggatcat ggtcaggatc agcggcccca ggatcgaggc gccgaacaat ccggcccgtt
      841 ccgccagctt ccagcccagg aaacccgccg cgaccatgag cgcgatctgg gacgccgaat
      901 agcccgcgat cgaggcgccc ggcggccgcg ccagatcgac gccccagtag atgcgcatga
      961 tcagcggcgc cacggtcacg atcaccagca cccgcgtcgc atgaatcagc gacagcgccc
     1021 gcacgtcgcc gcccgcctct tcgccgaaga ccagcatgtc ctgaaggccg cccggcatcg
     1081 ccgcatacca ggcggtggca tgatcgaagc cgaagacacg ccggaacagc ggatagccga
     1141 ccatcgcgat gatcgcgatg aagatcggca ccagcgccag cgaggccgcg atttcgggca
     1201 ggccggccag cacttcaggg gtgatggatg cgccgaccgc cacccccagg aaggtccgca
     1261 tg
//
LOCUS       DTVW01000445            1035 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1551468, whole
            genome shotgun sequence.
ACCESSION   DTVW01000445 DTVW01000000
VERSION     DTVW01000445.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1035)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1035)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1035
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1551468"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            86..445
                     /locus_tag="EYO87_05915"
                     /pseudo
     CDS             86..445
                     /locus_tag="EYO87_05915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013566999.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
BASE COUNT          192 a          348 c          313 g          182 t
ORIGIN      
        1 gtcccaacgg acaaatagca tagccgcttc caatccgccg cagaagccga taccatcccg
       61 ccgcaagcac aaggaggctt tcgagatgcg aagaatcgcc ctgaccctcg ttctgttgtt
      121 atcgctggtc acgccggccg cggccgagaa ccacgaaatc atagcgccgc ccggatcgag
      181 aaccgacctg cccttcagcc ccgccgtcat ggcaggcgac tttctctact tgtcgggctc
      241 gctctccgcg gaaccgacgg atatcaggga gcaggtcaag cagacgcttc tgaatctcaa
      301 ggccactttg aaagccgcgg acatggattt ttcgcacgtc gtgagcgcca ccgtttattt
      361 gtccgatgcc cggtacttca gcgccatgaa cgaggtctac cggagctacc ttcccgatgc
      421 gccgccggtg cgggccacgg tccaagccga catcgccatc cctgctgcac tcgcggagat
      481 cgccatgatc gccgtcaagc ccggcgtcga acgtaaagtc gtgatgcccg cgggagtaac
      541 ggagtggacc gcgccctaca gtccggggat tatggcgggt aacacgttgt ttaccgcggg
      601 gatggtggga cgcaagcgcg gcgcacccgc ttcggagcag ccgatggatg tcgcggggca
      661 gacgagccag gctctggcaa acgtcgaggc cgtgctaacc gcggcgggca tgagcaagac
      721 cgacgtgacg tcctgcaatg tctatctccc ggacgcccgc catttccagg acatgaacgg
      781 cgcttaccgc gcttttttct ccgaagcgcc gcccacgcgc gccaccgttc gcgccggcct
      841 catgggaaca ggccttcacg tcgagatcat gtgtgtcgcc gtcaagggcg gcgaccgccg
      901 catcgttggg ccgagccgcc ccaatgccac tctttcgcgg ggcattcgcg tgggcgaccg
      961 cctgtttctc tcgggcatta ccggtcgcgg tcccgacggc tacgcgcccg gcgatgtgaa
     1021 agcgcaaacg cgtca
//
LOCUS       DTVW01000446            7783 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1551908, whole
            genome shotgun sequence.
ACCESSION   DTVW01000446 DTVW01000000
VERSION     DTVW01000446.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 7783)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7783)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7783
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1551908"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1636)
                     /locus_tag="EYO87_05920"
     CDS             complement(<1..1636)
                     /locus_tag="EYO87_05920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_354892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C4-dicarboxylate ABC transporter permease"
                     /protein_id="HIC65523.1"
                     /translation="MELLGYFLDALTPLNLALALVGVVLGTVIGALPGLSATMAVAVL
                     VPFTFSMDPASGLIALGAIYTGAIYGGAFAAILVNTPGTPSSIATTFDGYPMARRGDG
                     GLAVTLATLASVCGGIVGALALLFLAPPLARVALAFGPPEYFWLAIFGLTLIAALSVG
                     NTLKGLIGACLGLLLSMVGVAVVGGDVRLTGGLPAFLGGIDVVSALIGLYCVPVILDL
                     VATRAAHLKVELDDRGYRLREAFGIAWASKFNVARSSVIGTVVGILPGAGGSIAGLVS
                     YTEARRASTRSANFGKGEPDGVIATEAANNATVGGGFIPTLVLGIPGTPPDAIILGAL
                     LVQGIKIGPQLFTSEANIVYTFIYGLLIATILMLPAGLLIGRYAYRSIIAFPKSLLVP
                     TIAFLTVVGSFAINSNVLDVQMMFVLGIVGWVLNRYGFQPSPIVLGLVLGQIAEQGFV
                     QTYLIGNATGNLLGMYFGRPISIGIILAALLSLGYPFYAEWRMKKKPRQPLTEIAMQA
                     ESHPVRTDRAPQDGPRTTDRGALIAGAAFVALGAVAL"
     gene            complement(1649..2611)
                     /locus_tag="EYO87_05925"
     CDS             complement(1649..2611)
                     /locus_tag="EYO87_05925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_354891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HIC65524.1"
                     /translation="MKIRTLFAATATLAALAAWPVASQSTADFPTKAMTYIIPFDAGG
                     ESDISARFQQSVWKKYTGQDVIIQYQPGAGGAQAWSQLNDIAGDGYTIMGINLPHTIL
                     QPMEGNVGYTTDDLTPVNYFHYTPNAILVPADSEFKTLQDLIDYAKSNPGMVTFAGSG
                     SKSANNLAQAQFDAAAGTTTTYVPFSGTGPSITAVLGKQTTAGFNYATSAIAQGDALR
                     ILAVAAEERMPAFPDVPTFKELGLDLVGGAYRGVAVPASTPEDLRQRISDIVSEINAD
                     PDFVKKMEDGGFVLTDFTYDKMPEFIARMKEEYATSAKALGIGQ"
     gene            2823..3722
                     /locus_tag="EYO87_05930"
     CDS             2823..3722
                     /locus_tag="EYO87_05930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008838957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HIC65525.1"
                     /translation="MPAVTDMHFFAVVAQRSTLSEAALDLGLTASAVSRRLARLENRL
                     GVRLVNRTTRRLGLTSEGEAYLRASRDILGRIALAEDAISATRAAPQGPLRVNATFQF
                     GREHVAPALAVFAARFPDVQAQLVLTDAPANLVEDGFDLQIKFGEPTATRNVMALLLR
                     NRRVLIASPEYLRAHGRPKRLSDLEDHACIALRQEHAAYDVWRFGDDDSVRIRSGLST
                     NDGEIAVSWVLGGHGIMLRSEWDIARHVRAGRLEVVLPRHAMRADIFAVYPERLNLSA
                     KVRMFIDILRDRIREQSSRLQLP"
     gene            3855..5018
                     /locus_tag="EYO87_05935"
     CDS             3855..5018
                     /locus_tag="EYO87_05935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006449176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mandelate racemase"
                     /protein_id="HIC65526.1"
                     /translation="MRIIDIRETTRPIASPIRNAYIDFSKMTISLVAVVTDVVRDGRR
                     VVGYGFNSNGRYGQGGLIRERFRDRILEAAPESLMNEAGDNLDPHRIWAAMMGNEKPG
                     GHGERSVAVGTIDMAVWDAVAKIAGKPLFRLLARMHDRKADPRVFVYAAGGYYYPGKD
                     NGALRAEMRSYLDRGYTVVKMKIGGAPIDEDRARIEAVLDEIGSQAQLAVDANGRFDL
                     ETCIAYAKMLRDYPLFWYEEIGDPLDFALQAAMSEFYDPPMATGENLFSHQDARNLLR
                     YGGMRPDRDFLQFDCALSYGLVEYLRTLDVLRQFGWSPRRCIPHGGHQMSLNIAAGLG
                     LGGNESYPDLFQPYGGFPDGVAVEDGHITMPDLPGIGFEGKADLAAEMRSLAE"
     gene            complement(5150..7390)
                     /locus_tag="EYO87_05940"
     CDS             complement(5150..7390)
                     /locus_tag="EYO87_05940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013639493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HIC65527.1"
                     /translation="MSDTMSRPMRFGSNSGQPLTRRDGLAKVTGTATFAADNHPRNLL
                     YAVCLPATIARGRVAHLDVAAAEAHPGVSHVMTQQNRPPLQGDPSEKPTMFSFRIEVL
                     QDDTVRYAGQPIAMVLGETIEAATEGARLLNPRYETMTPRIALDQNEPEALEPGALGR
                     PADVEHGDMQTARNSAAQGIDVTYETAPQYHNAMETHAVVAQWDGDRLILDMPSQALV
                     LSCAGYAHFFGIPAGNVTLRSPFLGGGFGSKAIPTGPQVLAILAARMTGRPVKLMLTR
                     QQMFGPVGHRGATRQRLRLGTDDAAALSFIDHEGVSETSSFDDFLEPAANASQGLYAA
                     QALRSTHRGVRLDVGTPSPMRAPGEASGSAALECAMDEMAEATGLDPLEFRLRNYAET
                     EPGTGKPYSSKALRECYAEGARRFGWSRRPLAPRQMQDADGMLVGWGMGTALFPCPMF
                     AADARATLRADGTALFETSAADMGQGAWTALAQIAADSLGLPIEKIEFRSGNSTLPDG
                     GIAGGSGHTATAGSALDASGRDVIRQLGSMAAADPASPLHGADNATFQARDGRIEVEG
                     DPARGEDLAAILHRAGLEQLEGQGSAFRKPEDAENRAMNAHGAVFAEVKIDPDLCQMR
                     VTRLVGAFAAGRIINPRLAESQLMGGMIWGVSFALHEKAQHDPRTGRIMNADFAGYHI
                     PVNADIRDLEVITIHEDDPYVNALGIKGVGEIGITGTVGAIANAIRHATGRRIRHFPI
                     RIEDLL"
     gene            complement(7383..>7783)
                     /locus_tag="EYO87_05945"
     CDS             complement(7383..>7783)
                     /locus_tag="EYO87_05945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011941571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein subunit M"
                     /protein_id="HIC65528.1"
                     /translation="AAAAEFAGHARYLKLRDRTSFAFATVSAAAALKIEGGIITGARL
                     ALGAVAAKPWRAAEAEALLTGHAPDAALFDRAAEAALSDAVPAHDNAWKIPIARRVAA
                     RALALAARGTPARMPALPASVFAAEEPAHV"
BASE COUNT         1346 a         2524 c         2605 g         1308 t
ORIGIN      
        1 ccagcgccac cgcgcccagg gccacgaagg ccgcgcccgc gatcaacgcg ccccggtcgg
       61 tcgtgcgcgg gccatcctgc ggcgccctgt ccgtgcgaac cggatggctt tcggcctgca
      121 tcgcgatctc ggtcagcggc tggcggggct ttttcttcat ccgccattcg gcatagaatg
      181 gatagcccag cgacagcagc gcggcgagga tgatgccgat gctgatggga cggccgaaat
      241 acatgcccaa cagatttccg gtggcgttgc cgatcaggta ggtctgcacg aagccctgtt
      301 ccgcgatctg gcccagaacc agacccagca cgatgggcga gggctggaaa ccgtagcggt
      361 tcagcaccca gccgacgatt cccagcacga acatcatctg gacatcgaga acgttcgagt
      421 tgatcgcgaa cgagccgacg accgtcagga aggcgatggt cggcaccagc agcgacttcg
      481 gaaaggcgat gatcgaacga taggcatagc gaccgatcag caggcccgcc ggcagcatca
      541 ggatcgtcgc gatcagcagg ccgtagatga aggtatagac gatattggct tcgctggtga
      601 aaagctgcgg gccgatcttg atcccctgga ccagcagcgc gccaaggatg atcgcatcgg
      661 gcggggtgcc cggaattccc agcaccaggg tcgggatgaa accgcctccg acggtggcgt
      721 tgttggccgc ctcggtcgcg atcacgccat cgggttcgcc cttgccgaaa ttggccgatc
      781 gggtcgaggc gcgccgggcc tcggtatagc tgaccagccc cgcaatggat ccgcccgcgc
      841 ccggaagaat gcccacgacc gtgccgatca ccgaagaccg cgccacgttg aatttcgacg
      901 cccaggcgat gccgaaagcc tcgcgcagcc ggtagccgcg atcatccagt tccaccttca
      961 gatgcgcggc gcgggtggcg accagatcca ggatcaccgg aacgcaatac aacccgatca
     1021 gggccgagac gacatcgatt ccgcccagaa aggccggcag cccgccggtc agccgcacat
     1081 ccccgccgac cacggcgacg ccgaccatcg acagaagcag acccagacag gcgccgatca
     1141 gacccttcag cgtgttgccg accgacagcg ccgcgatcag tgtcagaccg aagatcgcca
     1201 gccagaaata ttccggcggc ccgaaggcca gcgcgacgcg cgccagcggc ggcgccagaa
     1261 acagcagcgc cagcgccccg acgatcccgc cgcagaccga ggccagcgtc gccagcgtca
     1321 ccgccagccc gccatcgccg cgccgcgcca tcggatagcc gtcaaaggtg gtcgcgatcg
     1381 acgagggcgt gccgggcgta ttgaccagga tcgcggcgaa ggccccgcca tagatggcgc
     1441 cggtatagat cgcgccaagc gcgatcagac cggacgcggg atccatcgag aaggtgaacg
     1501 gaaccaggac cgcgaccgcc atcgtggccg acaggcccgg cagcgcaccg atgacggttc
     1561 ccagcacgac gcccaccagc gccagtgcca ggttcagcgg cgtcagcgcg tccagaaaat
     1621 agccaagcag ttccattcac cgggcctctt actggccgat gcccagagcc ttggcgctgg
     1681 ttgcgtattc ctctttcatc cgggcaatga attcgggcat cttgtcatag gtgaagtcgg
     1741 tcagcacgaa accgccatcc tccatcttct tgacgaagtc cggatcggca ttgatctcgg
     1801 acacgatgtc ggagatgcgc tgacggagat cctcgggcgt cgaggccgga accgcgacac
     1861 cgcgataggc gcctccgaca aggtcgagcc ccagttcctt gaaggtcgga acatcgggga
     1921 aggcgggcat ccgttcttcc gccgcgaccg ccaggatccg cagcgcgtcg ccctgcgcga
     1981 tcgcagaagt ggcataattg aagcccgccg tcgtctgctt gcccagaacc gccgtgatcg
     2041 acggaccggt gcccgagaac ggcacatagg tcgtcgtcgt gcccgccgcc gcgtcgaatt
     2101 gcgcctgcgc cagattgttg gccgatttcg agcccgagcc cgcgaatgtc accatccccg
     2161 gattgctctt ggcatagtcg atcagatcct gaagcgtctt gaattcgctg tctgccggca
     2221 ccaggatggc gttcggcgta tagtggaaat aattcaccgg cgtcaggtcg tcggtggtat
     2281 atccgacatt gccttccatg ggttgcagga tcgtgtgggg caggttgatg cccatgatcg
     2341 tatagccgtc gccggcgatg tcgttgagct gcgaccaggc ctgcgcgccg ccggcaccgg
     2401 gctgatactg gatgatcacg tcctgaccgg tatatttctt ccacaccgat tgctggaagc
     2461 gcgccgagat atcggattct ccgccggcat cgaaggggat gatataggtc atcgccttgg
     2521 tcggaaaatc ggccgtcgat tgcgacgcga caggccatgc cgccagtgcg gccaaggtgg
     2581 cggtcgcggc gaatagcgtt ctgatcttca tggtttcctc cctgacagat tgacccgaag
     2641 acgatccaac gccttcgggc ggccggaatc ccgccgtgtt tcgtgggact ttccccgatc
     2701 gggtcccgga ttcgtcgggc ctgtgctctc agaccctacg gaaactgtag tcgatgaaac
     2761 gggggctggg aaattccggt tattcacatc attattgatt tgagggaaca gatgggatga
     2821 ccatgccggc cgtgacggac atgcatttct tcgccgtcgt ggcgcagcgc agcaccttgt
     2881 ccgaggcggc gctggatctg gggctgacgg catccgcggt cagccgcagg ctggcccgtc
     2941 tggagaaccg gctgggcgtg cggctggtca atcgcaccac gcggcgtctt ggcctgacct
     3001 cggagggcga agcctatctg cgcgcctcgc gggacatcct gggccggatc gccttggccg
     3061 aagacgcgat atcggccacg cgggccgcgc cgcaggggcc gctgcgggtc aacgccacct
     3121 tccagttcgg ccgcgaacat gtcgcgcccg cgcttgcggt ctttgcggcg cgctttcccg
     3181 atgtccaggc gcaactggtg ctgaccgatg cgcctgcaaa tcttgtcgag gacggattcg
     3241 acctgcagat caagttcggc gagccaaccg cgacgcgcaa tgtgatggcg ctgctgctgc
     3301 gcaaccgccg tgtcctgatc gcctcgccgg aatacctgcg tgcgcatggc aggccgaaac
     3361 ggctgtccga tctggaagat cacgcctgca tcgctctgcg gcaggaacac gcggcctatg
     3421 acgtgtggcg cttcggcgac gatgacagcg tgcgcataag aagcgggctt tcgaccaatg
     3481 acggagaaat cgccgtctcc tgggttctgg gcgggcatgg catcatgctg cgctccgaat
     3541 gggacatcgc gcgccatgtc agggcagggc ggctggaggt ggtgttgccg cgccacgcga
     3601 tgcgggcgga tatcttcgcc gtctatcccg aacggctgaa cctttcggca aaggtgcgca
     3661 tgttcatcga catcctgcgc gaccgcatcc gcgagcaatc gtcccgcctc cagcttccat
     3721 aggcgccggg gcgatgccgc gcttggcggt tcaaaatccc gcggtccggg atccggggcc
     3781 gcgattggcc gtggccagga tcgccgcgac atcgtaaggc ggtgcaatgc cggcagaagc
     3841 agggaggttc agccatgcgc atcatcgaca ttcgcgaaac gaccaggccg atagcatcgc
     3901 cgatccgcaa cgcctatatc gatttcagca agatgacgat cagtctggtc gccgtcgtga
     3961 cagatgtggt ccgcgacggc cgccgggtcg tgggatacgg gttcaattcg aacggccgat
     4021 acggtcaggg cgggcttatc cgggaacgtt tccgcgaccg gatcctggag gccgcgcccg
     4081 aaagcctgat gaacgaggcc ggcgacaacc tggatccgca tcggatctgg gcggcgatga
     4141 tgggcaatga aaagccgggc gggcatggcg aaagatcggt cgcggtgggc acgatcgaca
     4201 tggcggtctg ggacgcggtg gccaagatcg ctggcaagcc gctgttccgc ctgctggccc
     4261 ggatgcatga ccgcaaggcc gatccgcggg tcttcgtcta tgccgccggt ggctactatt
     4321 atcccggcaa ggacaacggc gccttgcggg ccgagatgcg cagctacctg gatcggggct
     4381 ataccgtcgt gaagatgaag atcggcggtg ccccgatcga cgaggaccgt gcccggatcg
     4441 aggccgtcct ggacgagatc ggctcgcagg cgcaactggc ggtcgatgcc aatggccgtt
     4501 tcgatctgga aacctgcatt gcctatgcga agatgctgcg tgattacccg ctgttctggt
     4561 acgaggaaat cggcgatccg ctggatttcg cgcttcaggc cgcgatgtcg gaattctacg
     4621 atccgccgat ggccacgggc gagaacctgt tctcgcatca ggatgcccgc aacctcttgc
     4681 gctatggcgg gatgcgcccg gaccgcgact ttttgcaatt cgactgcgct ctgtcctacg
     4741 ggcttgtcga atatctgcgg acgcttgatg tgctgcgcca gttcggctgg tcgcccagac
     4801 gctgcattcc gcatggcggc catcagatgt cgctgaacat cgcggcgggc cttggtctgg
     4861 gcggcaatga aagctatccc gacctgtttc agccctatgg cggctttccc gacggcgtcg
     4921 ccgtcgagga tggccacatc accatgccgg accttccggg tatcgggttc gagggcaagg
     4981 ccgatcttgc cgccgagatg aggtcgctgg ccgaatagcg attcgttggc ccgggccgcc
     5041 ggaccgatcc gcgtattgac cagaaggggc gcgcgcagcg ggatcgaacg ggcgatgagg
     5101 gacggcggcg gggcgcccga cagggcccgg gcatgggcat gggcatggtt cagagaagat
     5161 cctcgatccg gatcgggaaa tgcctgatcc gccgtcctgt cgcatgccgg atggcattgg
     5221 cgatggcgcc gacggttccg gtgatgccga tctcgcccac gcccttgatg ccaagcgcgt
     5281 tcacataggg atcatcctcg tggatggtga tcacctccag atcgcggata tcggcgttca
     5341 ccggtatgtg atagccggcg aaatcggcgt tcatgatccg tccggtgcgg ggatcgtgct
     5401 gcgccttttc gtgcagcgcg aacgagacgc cccagatcat gccgcccatc agctggcttt
     5461 cggcgagacg cggattgatg atccgtcccg ccgcgaaggc gccgaccaga cgggtcacgc
     5521 gcatctggca caggtcggga tcgatcttca cctcggcgaa gacggcgcca tgtgcgttca
     5581 tggcacggtt ttcggcatct tccggcttgc gaaaggcgct gccctggcct tccagttgct
     5641 caagtcccgc tcggtgcagg atggcggcca gatcctcgcc gcgcgcgggg tcgccctcga
     5701 cctcgatccg gccgtcgcgg gcctggaagg tcgcgttgtc cgcgccgtgc agcggcgagg
     5761 cgggatcggc cgccgccatg ctgccaagct ggcggatcac gtcgcgcccc gatgcatcca
     5821 gggcgctgcc cgctgtcgcc gtatgccccg aaccgcccgc gataccgcca tcgggcaggg
     5881 tcgaattgcc ggaccggaac tcgatcttct cgatcggcag gccaagactg tcggcggcga
     5941 tctgggccag cgccgtccat gcgccctgtc ccatgtcggc ggccgatgtc tcgaacaggg
     6001 cggtgccgtc ggcgcgcagg gtggcacggg catcggcggc aaacatgggg cagggaaaca
     6061 gcgccgtgcc catgccccag ccgaccagca tcccgtccgc gtcctgcatc tggcgcggtg
     6121 caagcggtcg ccgggaccag ccgaaacgac gcgccccctc ggcatagcat tcacgcagcg
     6181 ccttggacga atagggtttg cccgttccgg gctcggtctc ggcgtaattg cgcagccgga
     6241 actccagcgg atcgaggccc gtcgcctcgg ccatttcgtc catcgcgcat tccagcgcgg
     6301 ccgaaccgga cgcctcgccg ggggcccgca tcgggctggg cgtgccgaca tccagccgta
     6361 cgccgcgatg ggtcgaacgc agcgcctgcg ccgcgtagag cccctgcgag gcattcgcgg
     6421 ccggttccag aaagtcgtcg aaactggagg tttccgacac cccctcgtga tcgatgaagc
     6481 tcagcgccgc cgcgtcatcg gtgcccagcc gcagccgctg ccgtgtggcg ccgcgatggc
     6541 cgacggggcc gaacatctgc tggcgcgtca acatcagctt gaccgggcgc cccgtcatcc
     6601 ttgcggccag gatcgccaga acctgcggcc ccgtcgggat cgccttggac ccgaatccgc
     6661 cgcccagaaa ggggctgcgc agggtgacgt tgccggccgg aatgccgaag aaatgtgcgt
     6721 atcccgcaca ggacagcaca agcgcctgac tgggcatgtc cagaatcagc cggtcgccgt
     6781 cccattgcgc cacgaccgcg tgcgtttcca tcgcgttgtg atattgcggc gcggtctcgt
     6841 aggtcacgtc gatgccttgc gcggcggaat tcctggcggt ctgcatgtcg ccatgctcga
     6901 catcggcggg tctgccaagg gcgccgggct ccagcgcctc cggctcgttc tggtccaggg
     6961 cgatgcgggg cgtcatcgtc tcgtagcgcg ggttcagaag gcgcgcgccc tcggtcgcgg
     7021 cttcgatggt ctcgcccaga accatggcga tcggctgacc ggcatagcgg accgtgtcgt
     7081 cctgaagcac ctcgatgcgg aacgagaaca tggtcggctt ttcggacgga tcgccctgaa
     7141 gcggcgggcg gttctgctgc gtcatcacat ggctcacgcc gggatgcgcc tcggccgccg
     7201 cgacatccag atgcgcgacc cggccgcggg cgatcgtggc cggcagacag accgcgtaaa
     7261 gcaggtttcg ggggtggttg tcggcggcga aggtcgcggt gccggttacc ttggcaagac
     7321 cgtcgcgccg cgtcagcggc tggccggaat tcgatccgaa gcgcatcggg cgggacatgg
     7381 tatcagacat gggcaggctc ctcggcggcg aagacagagg cggggagcgc cggcatccgc
     7441 gccggcgtgc cccgtgcggc aagcgccagc gcgcgggcgg cgacgcgccg ggcgatcggg
     7501 atcttccagg cattgtcatg cgccggcacg gcatccgaca gggccgcctc ggcggcgcgg
     7561 tcgaacaggg ccgcgtcggg cgcgtgaccg gtcagcagtg cctcggcctc ggcggccctc
     7621 cagggtttcg cggcgaccgc gcccagggcc aggcgcgcgc ccgtgatgat cccgccctcg
     7681 attttcagcg ccgcggcagc cgagaccgtg gcgaaggcga aagaggtccg gtctcgcagt
     7741 ttcagatagc gcgcgtgacc tgcgaattcc gccgcggcgg cgg
//
LOCUS       DTVW01000447            2168 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1552627, whole
            genome shotgun sequence.
ACCESSION   DTVW01000447 DTVW01000000
VERSION     DTVW01000447.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2168)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2168)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2168
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1552627"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(12..488)
                     /locus_tag="EYO87_05950"
     CDS             complement(12..488)
                     /locus_tag="EYO87_05950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018688478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase subunit gamma"
                     /protein_id="HIC65529.1"
                     /translation="MHHDAQAPTEDEIRAVAAPLASLEGPLLPMLHAVQHEYGCVPEA
                     AVPVLADLLNLSRAEVHGVVSFYHDFRKAPAGKHILRLCRAEACQSMGGQALAEATLA
                     RLGIGGHDTTANGAVTVEPVYCLGLCACAPAAMLDDRVVARLDAARLDRLLAEAGA"
     gene            complement(574..1461)
                     /locus_tag="EYO87_05955"
     CDS             complement(574..1461)
                     /locus_tag="EYO87_05955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009819573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HIC65530.1"
                     /translation="MIDKLEMFLAVAKERHFGRAATSLGITQPTLSAGIKQLEEQLGV
                     LLIFRGSRFGGLTPEGQAALIWARRIVGDSRQLREEMRATRHGLSGRLRIAVIPTALT
                     WAARISARFGRAHPNVAFTILSRNSVEILQMIDDLDVDAGISYLDNEPLGKVSTVPLY
                     DERYMLVCDPGSDLAGRDRVAWADLDGQRLCLLTSDMQNRRIINRNLSAAGVTPQASV
                     ESGSTVVLVSHVVEGGWVTILPEDIAAFLGHGKNLRLIPLEKPQTIHAVGLVAPWREP
                     HTPVLEALLAEARRLVVDR"
     gene            complement(1552..>2168)
                     /locus_tag="EYO87_05960"
     CDS             complement(1552..>2168)
                     /locus_tag="EYO87_05960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010397418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit"
                     /protein_id="HIC65531.1"
                     /translation="SSGDAMAEIERLVGQLPGGFDVAWTGLSLEERQAGDQTMLLYAL
                     SLAAVFLCLAALYESWSIPLAVILVMPIGILGALAGAWAGAFDNGVFFQVGLLTVIGL
                     TGKNAILIVEFAREQSQAGMPLFKAVVEAARQRFRPIIMTSIAFSLGVLPLVLSSGAG
                     ANGRNAIGATVLGGTLAATALGILFAPLFYVLMRRLLGRKDQFD"
BASE COUNT          400 a          745 c          709 g          314 t
ORIGIN      
        1 aacccagatc ctcatgcgcc ggcctcggcc agcaatctgt caaggcgggc cgcatccagt
       61 cgcgcgacga cgcggtcgtc cagcatggcg gcgggggcgc aggcgcacag gcccaggcaa
      121 tagaccggct cgaccgtgac cgcgccattg gccgtggtgt cgtgcccgcc gatgcccagc
      181 cttgccaggg tcgcctcggc cagggcttgg ccgcccatgg actgacaggc ctcggcccgg
      241 cagaggcgca gaatatgctt tcccgccgga gccttgcgga aatcgtggta gaagctgacg
      301 acaccgtgga cctcggcccg cgacaggttc agcagatcgg ccagaaccgg caccgcggct
      361 tcgggcacgc agccgtattc gtgctgcacc gcgtgcagca tcggcagtaa cggcccttcg
      421 agcgaggcga gcggcgcggc gaccgcgcga atctcgtcct cggtcggggc ttgcgcatcg
      481 tgatgcatgg ctggcctttc gacggtcccg tggcttcagc aaacaggtcc ggcaatggaa
      541 aatcaataac gcaattccgt cagtcgatag aaattatcta tcgacaacca gccgccgcgc
      601 ctcggccaac agcgcctcca gcaccggcgt atgcggttcg cgccacggcg cgaccagacc
      661 cacggcgtga atcgtctgcg gcttttccag cgggatcagg cgcaggttct tgccgtggcc
      721 cagaaaggcg gcgatatcct cgggcaggat ggtgacccag cccccctcga ccacatgcga
      781 gaccagcacc acggtcgagc cggattcgac gctggcctgc ggcgtcaccc cggcggccga
      841 aaggttgcga ttgatgatcc gccggttctg catgtccgag gtcagcaggc acagccgctg
      901 cccgtccaga tcagcccatg ccacgcgatc gcgacccgcc agatcgctgc ccgggtcgca
      961 gaccagcatg tagcgttcgt cgtaaagcgg cacggtcgag accttgccca gcggttcgtt
     1021 gtccagatag gaaatccccg catcgacgtc gagatcgtcg atcatctgca aaatctcgac
     1081 cgaattgcgc gacaggatgg tgaaggcgac gttcggatgg gcccggccga agcgggcgct
     1141 gatccgcgcg gcccaggtca gcgcggtcgg gatgacagcg atgcgcaacc gtcccgacag
     1201 gccgtgccgg gtggcccgca tctcttcgcg caactggcgg ctgtcgccga cgatcctgcg
     1261 tgcccagatc agtgccgcct gcccctcggg cgtcaggccg ccaaagcgcg agcctctaaa
     1321 gatcagcagg acgccaagct gttcctcaag ctgcttgatg ccggcagaca gggtgggctg
     1381 ggttatgccc aggctggtgg cggcgcggcc gaaatgacgt tctttcgcga cggcaaggaa
     1441 catttccagc ttgtcgatca aggcggtctc tcccagaggc aggcaaggcc cgcggatcgt
     1501 atccaggggc cgcgcgccgc ggcgtgaaga gacgcgcggc catccccggc ctcagtcgaa
     1561 ctggtccttg cggcccagca ggcggcgcat cagcacgtag aacagcggcg cgaacaggat
     1621 acccaacgcg gtggcggcca gggttccgcc cagcacggtc gcgccgatgg cgttgcgccc
     1681 gttcgcgccc gcgcccgaag acaggaccag cggcaggaca cccagcgaaa aggcgatcga
     1741 ggtcatgatg atcgggcgga accgctggcg cgcggcctcg accacggcct tgaacagcgg
     1801 catcccggcc tgcgactgct cgcgcgcgaa ttcgacgatg aggatcgcgt tcttgccggt
     1861 cagcccgatc accgtcagca atccgacctg gaagaagacc ccgttgtcga aggcccccgc
     1921 ccaggcgccg gcaagggcgc cgagaatccc gatgggcatg accaggatca ccgccagcgg
     1981 gatcgaccag ctttcgtaaa gcgccgccag gcacaggaac acggcggcca gcgacagcgc
     2041 ataaagcagc atcgtctggt ccccggcctg ccgttcctcc agcgacaggc ccgtccatgc
     2101 gacatcgaaa ccgccgggca actggccgac cagccgctcg atctcggcca tggcgtcgcc
     2161 cgaggaca
//
LOCUS       DTVW01000448            1604 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1552738, whole
            genome shotgun sequence.
ACCESSION   DTVW01000448 DTVW01000000
VERSION     DTVW01000448.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1604)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1604)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1604
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1552738"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..560)
                     /locus_tag="EYO87_05965"
     CDS             complement(<1..560)
                     /locus_tag="EYO87_05965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65532.1"
                     /translation="MKRAIVTALWLALSAAPALSGEAGDAVFAERGPWKLQRDGMRWS
                     HRVDGPEAEGFVQVDDGSVTLREAIDPTDQKPILQITQKTDTRSREIGPFPISGGDPV
                     LVFFLEQTTRDMARLTGSSPFYIRNRIKDAIFRGGQIAAAGAARKATFRPFADDPNAA
                     RMQGFETLTLTFVLDSDPKAPIRELLA"
     gene            complement(658..>1604)
                     /locus_tag="EYO87_05970"
     CDS             complement(658..>1604)
                     /locus_tag="EYO87_05970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hybrid sensor histidine kinase/response
                     regulator"
                     /protein_id="HIC65533.1"
                     /translation="GGAFESVEQLMHAVLDISRLDSQRIEFHRQPVALGDLFSRLAAE
                     YAPVAAAKGLGLTFVQTDAVVESDPVFLRRIAQNLVSNAIKYTHRGGVLVGARRRGGT
                     CWLSVYDTGVGIPAVDRNRVFDEFQRLGTESGTPGMGLGLSIVKRACAKLGHPISLTS
                     EAMRGTLFRVGLPLVDAAIDRRAQPPDRMIRALRGRVALVIENDAGMRRGYEMILTDR
                     LGMVARVTGGTAEALATMGDEPPDVILADYNLESGDDGIKAIDALRTSAGHAVPAVMV
                     TARRDPDIARACAAIGVNLMEKPVSPAELGEMLGRLLG"
BASE COUNT          236 a          558 c          556 g          254 t
ORIGIN      
        1 gccagcaatt cgcggatcgg ggccttggga tcgctgtcca gaacgaaggt cagggtcagc
       61 gtctcgaaac cctgcatccg cgcggcgttg ggatcgtcgg cgaaggggcg gaaggttgcc
      121 ttgcgggccg cgccggcggc cgcgatctgg ccgccccgga agatcgcgtc cttgatgcgg
      181 ttgcggatat agaaggggct gctgccggtc agccgggcca tgtcgcgggt ggtctgttcc
      241 agaaagaaga ccagcaccgg gtcgccgccc gaaatcggga agggcccgat ctcgcggctg
      301 cgcgtatcgg tcttctgggt gatttgcagg atcggcttct ggtccgtggg gtcgatcgct
      361 tcgcgcagcg tgaccgagcc gtcatcgact tgcacaaacc cctcggcctc ggggccatcg
      421 acgcgatgcg accagcgcat cccgtcccgt tgcagtttcc acggcccgcg ttcggcaaag
      481 accgcgtctc cggcctcgcc cgacagggcc ggcgcggccg acagggccag ccacagggcc
      541 gtcacgatgg cgcgtttcat gatcttgtcc tccggttttc cccgcgacga cgattgcgcc
      601 gcgcgcgccc gagggcaagc cccggcaggc ccggtctcag cccttggtcg cagggattca
      661 gcccagaagg cggcccagca tctcgcccag ttcggccggg ctgacgggct tttccatcag
      721 gttcaccccg atcgcggcgc aggcgcgcgc gatgtccggg tcgcgccgcg cggtcaccat
      781 caccgcgggc acggcatggc ctgcgctggt gcgcagggca tcgatggcct tgatcccgtc
      841 atcgccgctt tcaaggttgt agtcggccag gatcacgtcc ggcggctcgt cgcccatcgt
      901 ggccagcgcc tcggcggtgc cgccggtgac gcgggccacc atgcccagcc ggtcggtcag
      961 gatcatctcg tatccgcgcc gcatcccggc gtcattctcg atcaccagcg cgacccggcc
     1021 gcgcagcgcg cggatcatcc ggtcgggggg ctgggcgcgg cggtcgatgg cggcatcgac
     1081 caggggcagg ccgacgcgga acagggtgcc gcgcatcgcc tcggaggtca ggctgatcgg
     1141 gtggcccagc ttggcgcagg cgcgcttgac gatggacagg cccagcccca tgcccggcgt
     1201 tccggattcg gtgcccagcc gctgaaactc gtcgaagacg cggttgcggt ccaccgccgg
     1261 aatgccgacg ccggtatcat agaccgacag ccagcaggtg ccgccccgcc gccgcgcgcc
     1321 caccaggacg ccgccgcgat gggtatactt gatcgcgttc gagaccaggt tctgcgcgat
     1381 ccggcgcagg aagacgggat cgctttcgac caccgcatcg gtctgcacga aggtcaggcc
     1441 caggcccttt gctgcggcca ccggcgcata ttcggcggcc agcctgctga acagatcgcc
     1501 cagggcgacc ggctggcggt gaaactcgat ccgctggctg tccagccgcg agatgtcgag
     1561 cacggcatgc atcagctgtt ccaccgattc gaaggcgccg ccca
//
LOCUS       DTVW01000449            4465 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1553543, whole
            genome shotgun sequence.
ACCESSION   DTVW01000449 DTVW01000000
VERSION     DTVW01000449.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 4465)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4465)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4465
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1553543"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(58..2208)
                     /locus_tag="EYO87_05975"
     CDS             complement(58..2208)
                     /locus_tag="EYO87_05975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002812131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridine nucleotide-disulfide oxidoreductase"
                     /protein_id="HIC65534.1"
                     /translation="MKKTAFLVILAVLVGAALWLLRDQDLGVDALRGHLAGFTELRQS
                     RPLALAVAFLVAYVAVTALSLPLAVWMTLAAGALFGFWQGLLLVSFASAMGATLAFLV
                     ARYLARDWVRARLGARADRIDKGLARDGAFYLFSLRLIPVVPFFAVNLLMGLTLIPIW
                     SFYWISQLGMLAGTAVYVNAGTRLAGLESLSGIVSAPVLFSFAALAVFPWSARAVLGL
                     VRWRRVHAGWRRPRRFDRNLIVIGAGSAGLVSAYIAAATKARVTLIEAGSMGGDCLNY
                     GCVPSKALIRSATLAHQMRHASRWGLADTQPDIPFRAIMERIHEVIATIAPHDSVERY
                     TGLGVEVLKGHARLIDPWTVETSGKNGETRRLTTRAVIIATGARPFLPPLPGLDMVEP
                     LTSDDLWTRLRGQDHAPRRLVVLGGGPIGCELAQAFARLGSQVTQIEMAPRLMLREDP
                     EVAELVSSALRADGVTVLSGHKATGCGRDNGETWIEVEKDGATTRIPFDRIIVAVGRS
                     ARLEGFGLDRLGIAADRTIETNEYLETRFPNILAAGDVAGPFQFTHTASHQAWFASIN
                     ALFGVLKRFKADYRVIPWATFTDPEVARVGLSEAEARQKGIAVEVTRFDLADLDRAIT
                     DGAARGFVKVLTPPGKDRILGATIVGDHAGDLIAEFVLAMKYGLGLNRILGTIHIYPT
                     WAEAGKSVAGVWRRAHVDARALALAERFHRWRRG"
     gene            complement(2459..3148)
                     /locus_tag="EYO87_05980"
     CDS             complement(2459..3148)
                     /locus_tag="EYO87_05980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014379092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="haloacid dehalogenase type II"
                     /protein_id="HIC65535.1"
                     /translation="MTTQRPILVFDVNETLLDLDHLGPVFQEIFGDRAVMRDWFAQLI
                     LYSQTLTLIGARENFAALAVSVLEMMGTIRGIAITDRDRAALARALGSLPAHPDAAEA
                     LDYLRDLGFRMVTLTNSPPSDGPSALDRAGLGGYFERSFSVAPTGRFKPAPQTYRLVA
                     DALAVTPRDLCLVACHVWDTMGLQAMGGKGALVTHGVNAPLPGRSVPQPDLVAADLSS
                     LARRIAEAWPG"
     gene            3342..3584
                     /locus_tag="EYO87_05985"
     CDS             3342..3584
                     /locus_tag="EYO87_05985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010393912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BolA family transcriptional regulator"
                     /protein_id="HIC65536.1"
                     /translation="MAMEAHEIEALIRAAFPDARITITDLAGDGNHFAAEVIDESFRG
                     QNRVQQQRAVYAALKGRMDGNAGELHALALTTKAPD"
     gene            3636..3998
                     /gene="grxD"
                     /locus_tag="EYO87_05990"
     CDS             3636..3998
                     /gene="grxD"
                     /locus_tag="EYO87_05990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018000486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Grx4 family monothiol glutaredoxin"
                     /protein_id="HIC65537.1"
                     /translation="MSDVKDKIQDLIDTSDVVLFMKGTKEMPQCGFSSRVAGVLNYMG
                     VDYRDVNVLADDGIRQGVKDFSEWPTIPQLYVKGEFVGGCDIVTEMTLTGELDQLFDK
                     QGVGYDKDAAAKIREANA"
     gene            4146..>4465
                     /locus_tag="EYO87_05995"
     CDS             4146..>4465
                     /locus_tag="EYO87_05995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_004139996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TAXI family TRAP transporter solute-binding
                     subunit"
                     /protein_id="HIC65538.1"
                     /translation="MTIRNKIACLAAGVALTAAPLTASAQEFINILTGGTSGVYYPVG
                     GALSKIYSDGIEGAKVQVQSTKASVENLNLLQQGKGEIGLALGDSVKLAAEGSADAGF
                     PQPL"
BASE COUNT          859 a         1503 c         1423 g          680 t
ORIGIN      
        1 gatcaccttg acgacgatag gactgatgat tgtgcagcgg cagaagctgg gcgtcgatca
       61 tccgcgcctc cagcggtgga accgctctgc cagcgccagc gcgcgcgcgt ccacatgggc
      121 gcggcgccag acgccggcga cggatttgcc ggcctcggcc caggtcggat agatgtggat
      181 ggtgccgagg atcctgttca gccccagccc gtatttcatc gccagcacga attccgcgat
      241 cagatcgccg gcatggtcgc cgacgatggt cgcgcccagg atgcgatcct tgcccggcgg
      301 cgtcagaacc ttgacgaaac cccgcgccgc gccatcggtg atggcccggt ccagatcggc
      361 cagatcgaag cgcgtcacct cgaccgcgat acccttttgc cgtgcctcgg cctcggacaa
      421 tccgacgcgg gcgacttcgg ggtcggtaaa cgtggcccag ggaatcaccc ggtaatcggc
      481 cttgaagcgc ttgagcacgc cgaacagggc attgatgctg gcaaaccagg cctggtgcga
      541 ggccgtatgc gtgaactgga acggacccgc cacgtcgccc gccgccagga tgttgggaaa
      601 ccgcgtttcc agatattcgt tcgtctcgat cgtgcgatcg gccgcgatgc caagccggtc
      661 caggccgaac ccttccagcc gggcgctgcg ccccaccgcg acgatgatcc ggtcaaaggg
      721 aatgcgggtg gtcgcgccat ccttttcgac ctcgatccat gtctcaccat tgtctctgcc
      781 gcagcctgtg gctttgtgtc cgctcagcac ggtcacgcca tcggcccgca atgcggatga
      841 taccagctct gccacttcgg gatcctcgcg cagcatcagc cggggcgcca tctcgatctg
      901 cgtcacctgc gatcccaggc gggcgaaagc ctgtgccagc tcgcagccga tcgggccgcc
      961 gcccaggacg accagacggc gcggcgcatg atcctgcccc cgcagccggg tccacagatc
     1021 gtccgaggtc agcggctcga ccatatccag tccgggcagc ggcggcagga aaggccgcgc
     1081 cccggtggcg atgatcacgg cgcgcgtggt cagacgccgg gtttcgccat tcttgccact
     1141 tgtctcgacg gtccaggggt cgatcaggcg ggcatggccc ttcagcacct cgacgccaag
     1201 cccggtatag cgctcgacgc tgtcatgagg ggcgatcgtg gcgatcacct cgtggatccg
     1261 ttccatgatc gcgcggaacg ggatgtccgg ttgcgtgtcg gccagtcccc agcggcttgc
     1321 atgacgcatc tgatgggcca gtgtcgcgct gcggatcagc gccttggagg gcacgcagcc
     1381 atagttcagg caatcgcccc ccatgctgcc cgcctcgatc agggtcacac gcgccttggt
     1441 cgccgccgcg atataggccg agaccagccc ggccgatccg gccccgatca cgatcaggtt
     1501 gcgatcgaac cgccgcggcc gacgccagcc ggcatggacg cggcgccacc ggaccagccc
     1561 cagcaccgcc cgcgccgacc agggaaagac ggccagcgcc gcgaaagaga acaggaccgg
     1621 cgccgaaacg atgcctgaca ggctttcaag cccggccagc cgggtgcccg cattcacgta
     1681 gacggccgtg cccgccagca tccccagctg gctgatccag taaaagctcc agatcgggat
     1741 cagggtcagc cccattagca gattgaccgc gaagaacgga accaccggga tcaatcgcag
     1801 cgagaacagg tagaaggcgc cgtcgcgcgc caggcccttg tcgatcctgt ccgcccgcgc
     1861 gccaagccgc gcccgcaccc agtcccgcgc cagatagcgc gccaccagaa aggccagcgt
     1921 cgcccccatg gccgaggcga aagagaccag cagcagcccc tgccagaagc cgaacagcgc
     1981 cccggcggcc aatgtcatcc agaccgccag cggcagggac agcgcggtca cggcgacata
     2041 ggccacaaga aaggccaccg ccagcgccag cggacgagat tgccgcaatt cggtgaaccc
     2101 ggccagatgg ccgcgcaggg catcgacgcc aagatcctga tcgcgcaaca gccacaacgc
     2161 cgccccgaca aggaccgcaa ggatgacgag aaaggcggtt tttttcacga ctgctccttc
     2221 gttggccgtg gcgggcagtt cgtcctgtct tccgatttcg ttacaggaac agcgaaaccg
     2281 cgcggcggtc gcgggccttg tctgcgcgta aaggcaagca aaggctgcga ccggcagcct
     2341 ttcgggcgtc acggatcacg ccgccttcgg aatgatcgtt ccgaccggaa gcagaggcag
     2401 attgcagcac ctcgagtccc gacaagggga accggtcacg accaagaacc tgccatgatc
     2461 aacccggcca ggcctcggcg atccttcgcg ccaggctgga cagatcggcc gcgaccagat
     2521 cgggctgcgg cacggagcgg cccggcagcg gtgcattcac gccatgggtg acaagcgcgc
     2581 ccttgccgcc catggcctgc aagcccatcg tgtcccagac atggcacgcc accagacaca
     2641 gatcgcgcgg cgtgacggcc aatgcgtcgg cgacaagccg gtaggtctgc ggcgcgggct
     2701 tgaaacgtcc ggtcggcgcg acgctgaagg atctttcgaa atagccgccc aggcctgcgc
     2761 gatccagcgc cgaggggcca tccgagggcg gcgaattcgt cagcgtcacc atgcggaacc
     2821 cgaggtcgcg caggtaatcc agcgcctcgg ccgcatccgg atgcgccggc agcgatccca
     2881 gggcgcgcgc cagggcagcc ctgtcgcggt cggtgatcgc gatgccacgg atggttccca
     2941 tcatctccag caccgaaacc gccagcgcgg cgaaattctc gcgcgcgccg atcagggtca
     3001 gcgtctgcga atacaggatc agttgggcga accaatcgcg catcacggcg cgatcgccga
     3061 aaatctcctg gaacaccggc cccaggtggt cgaggtccag aagcgtctcg ttcacgtcga
     3121 agacaaggat cgggcgttgt gtcgtcatcg gggcttccat tgccgcagtc gcgttgcttc
     3181 agcctgaacc gaaaaccgtg ccgccgtaaa ccgtttttgg tcgggccatg ccggcgaaca
     3241 caatcgtcaa gcccgcctcg ccgcccgggc cgagctccgc cgcacttgcg gggctatcgt
     3301 gcatccccta catcttgcag caagcgacag aggacagcgc catggcgatg gaagcccacg
     3361 aaatcgaagc cctcatccgg gccgccttcc ccgatgcgcg gatcacgatc accgatctgg
     3421 ccggcgacgg caaccatttc gcggccgagg tcatcgacga aagcttccgg ggtcagaacc
     3481 gcgtccagca gcagcgcgcc gtctatgccg cgctgaaggg caggatggac ggcaatgcgg
     3541 gcgaactgca cgccctggcg ctgacaacca aggcccccga ttgacgcccc tgccccaccc
     3601 ggggcttcgg ccgcgcgaca gaaaggacaa atcagatgag cgacgtcaag gacaagatcc
     3661 aggacctgat cgataccagc gatgtggtgc tgttcatgaa gggcacgaag gaaatgccgc
     3721 aatgcgggtt ttccagccgc gtcgccggcg tgctgaacta catgggcgtc gattaccgcg
     3781 acgtgaacgt gctggccgat gacggcatcc gtcagggcgt caaggatttc tcggaatggc
     3841 cgacgattcc gcagctttat gtgaagggcg aattcgtggg cggctgcgac atcgtgaccg
     3901 aaatgacgtt gacgggcgaa ctggatcagc ttttcgacaa gcagggcgtc ggctatgaca
     3961 aggacgcggc cgcgaaaatt cgcgaggcaa atgcctgaaa cacctgaatc gcatgatatt
     4021 tccgggcgcc gcgcgatctt ttcgcgcggc gccctttgcg atgggccgaa gcttttccct
     4081 tttgaccttg tccggaaagc tgcctaacct gcgcccacca agaaaatgtc ccagggaggg
     4141 gaaacatgac aatccgcaac aagatcgcct gcctcgcggc gggcgtggcg ctgacggccg
     4201 cgccgctgac ggcttcggcg caggaattca tcaatatcct gaccggcggc acctcgggcg
     4261 tctattaccc ggtcggtggc gcgctgtcga agatttacag cgacggcatc gagggtgcca
     4321 aggttcaggt ccagtccacc aaggccagcg tcgagaacct gaacctgctg cagcagggca
     4381 agggcgagat cggtctggcg cttggcgact ccgtcaagct ggcggccgag ggcagcgccg
     4441 atgccggttt tccgcagccg ctgga
//
LOCUS       DTVW01000450            1438 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1554007, whole
            genome shotgun sequence.
ACCESSION   DTVW01000450 DTVW01000000
VERSION     DTVW01000450.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1438)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1438)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1438
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1554007"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..438)
                     /locus_tag="EYO87_06000"
     CDS             complement(<1..438)
                     /locus_tag="EYO87_06000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018304577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HIC65539.1"
                     /translation="MSPLMIFAAGLGTRMRPLTADRPKPLVEVAGRSLLERALDLGRD
                     AGCTPIAVNTHYLADQIAHRLAGKGVAISHEPGPILDTGGGLRQALPLLGRGPVLTLN
                     PDVVWTGPNPLTALEIGWNDRMDALLMLVPLDRATARTGGGDFA"
     gene            complement(426..1322)
                     /locus_tag="EYO87_06005"
     CDS             complement(426..1322)
                     /locus_tag="EYO87_06005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside phosphotransferase"
                     /protein_id="HIC65540.1"
                     /translation="MSVPVRRNIRRRVAVLMDDPSGDCAGFVQMTRWLRSHGFGAPEL
                     LAADDAAGLLLVEDLGDDLLARVLEKRPGMARALYERITDLLVALHRHPVPDFVRPLD
                     GPLLAEQVGLFAAWYPQAAGAPATDAAGIGPVIARLHADLAGDLPSVLSLRDFHAENL
                     IWRGDTAPLGLIDYQDAVACHPAYDLVSALQDARRDVAPAIEAACIARYLDATGMDAA
                     RFRAVYALLGAQRNLRIMGIFTRLCLRDGKPRYLDFMSRVWGHLRRDLTHPALAPLAR
                     IVAALPQPDPTVLERIRAQCPR"
BASE COUNT          267 a          491 c          479 g          201 t
ORIGIN      
        1 cgcgaaatcg ccgccgcccg ttcgcgccgt ggcccggtcc agcggcacca gcatcagcaa
       61 cgcgtccatc cggtcgttcc atccgatctc cagcgcggtc agcgggttcg gaccggtcca
      121 caccacgtcg ggattcagcg tcagcactgg cccccttccc agcagcggca gggcctgccg
      181 cagcccgccg ccggtatcaa ggatggggcc gggttcatga ctgatcgcga cgcccttccc
      241 cgcgagacga tgggcaatct ggtcagccag gtaatgcgtg ttgaccgcga tgggcgtgca
      301 tcccgcatcg cgacccagat ccagcgcgcg ctccagcagg gaccggcccg cgacctcgac
      361 cagcggtttg ggccgatcgg ccgtcagcgg ccgcatccgg gttcccaggc ccgcggcgaa
      421 gatcatcagc ggggacattg cgcgcgaatc ctttcgagga cggtcgggtc cggctggggc
      481 agcgccgcga cgatccgggc cagcggtgcc agcgcgggat gcgtcaggtc gcggcgcaga
      541 tgcccccaga cgcgcgacat gaagtccaga tagcgcggct tgccgtcgcg caggcagagc
      601 cgggtgaaga tgcccatgat ccgcaagttc cgctgcgcgc ccaacagggc atagacagcg
      661 cggaaacggg ccgcgtccat tccggtcgca tccaggtagc gggcgatgca ggcggcttcg
      721 atggcgggcg ccacgtcgcg gcgtgcgtcc tgcagcgccg agaccagatc ataggccgga
      781 tggcaggcca ccgcgtcctg ataatcgatc aggcccagcg gcgcggtgtc gccacgccag
      841 atcaggttct cggcgtggaa atcgcgcagc gacaggaccg aaggaagatc gcctgcaagg
      901 tcggcgtgca gccgggcgat gaccgggccg atgcctgcgg catcggtggc cggggcgccg
      961 gcggcctggg gataccacgc cgcgaacagg ccgacctgtt cggccagcag cggtccgtcc
     1021 agcgggcgga cgaaatcggg caccggatgg cggtgaagcg cgacaagaag atctgtgatc
     1081 cgctcataga gcgcgcgcgc catgccgggt cgcttctcca gcacccgcgc cagaagatcg
     1141 tcgcccagat cctcgaccag cagcagaccc gcggcgtcat ccgccgccag caattcgggc
     1201 gcgccgaagc catggctgcg cagccatcgg gtcatctgga caaaacccgc gcaatcgcct
     1261 gaagggtcgt ccatcagcac cgcgacacgg cgacggatat tcctgcggac cggcacgctc
     1321 actcagcgag cggttaaaac cggcagcatg ccaatcatgt gaatgcaaca acgattctgg
     1381 ttgagcgacg ctgccaattc caattcgcac aaactgacta aataccggtt ttaaacta
//
LOCUS       DTVW01000451            1027 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1554795, whole
            genome shotgun sequence.
ACCESSION   DTVW01000451 DTVW01000000
VERSION     DTVW01000451.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1027)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1027)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1027
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1554795"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
BASE COUNT          327 a          140 c          243 g          317 t
ORIGIN      
        1 agcaaattta agcggagtga ctctcaataa tggtgaacta ggtatagtta ctagctcggt
       61 tgctaatata ggagatgcac cacttaaaac tgcaatagta gtaggtcata cagatggaac
      121 taatagacta ccagtatcta gattatctta tggtaacgca gttccaaatt taggtggaat
      181 tacaggagga gcaaatttaa atgatttaat tcattatgat tcagataatt ataaacttta
      241 taggttaaat acaggtggaa atacagattt agatttgaca ggcgctgttg ctaatagggc
      301 tatttctggg tcattaatag ttactggagt agttagtgca tcttcaaatg tttggattgg
      361 tggtaattta catgcagtag gaaatattac atttgaagct ggttcaagtg gaacaattac
      421 acttggggat tctgctggag attcagttag ctttgcagca gacgtaactt caaatattat
      481 accaaatgcg agcgattcat acaatttagg aagtgatagt caaagatgga atgatttata
      541 tttaagtggt tcaatatcag ctagtggtgg tcctcatgca attgatagta ctacttctat
      601 tgcaatgaat agtactacta caacggcact taatgcgaca actactatga ctgttaaggg
      661 ggcaggtgga gcatcatttg gtgatgatac aggaacttgg gaatttgatg gaagtggagc
      721 agtttccgaa actggaatga ctacttttgc tgtaacacca tcaagtactt tgtatatgca
      781 aggtggaggc gtttcaagat atggtgatga tacttcttat tggagttttg atggaagtgg
      841 agcagtgtca gaaacaggaa tgacttcttt tactcttaat aattctggaa cattgacaat
      901 acagggaggg ggagtatcaa aatttggaga tgatactgct tattggagtt ttgacggaag
      961 tggggcttta tctgaaatag gaatgacaac agtttcagta acaccttcga gtacagtaga
     1021 tatagac
//
LOCUS       DTVW01000452            3172 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1555188, whole
            genome shotgun sequence.
ACCESSION   DTVW01000452 DTVW01000000
VERSION     DTVW01000452.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3172)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3172)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3172
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1555188"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..644)
                     /locus_tag="EYO87_06010"
     CDS             complement(<1..644)
                     /locus_tag="EYO87_06010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HIC65541.1"
                     /translation="MANAKALQQPLGLRLTSAGFLILWCLLAAFPIFWITVMSFKSPV
                     DAFSPNPLAVIFGPRTRAEGNGLSIIDIVLGLGLLWLSFRLAFGWLPRMVDRFSRPGT
                     IILGWIIAVMGYALTFVLVFFVLLPVLLAGLNAIAGTLGQPIIGLTTENYRAVWVENQ
                     FYRNFINSMIVTGGVVTISLTVGTLAGYGLSRSGSNLAFWLLIVALVFRALPHSV"
     gene            complement(646..1668)
                     /locus_tag="EYO87_06015"
     CDS             complement(646..1668)
                     /locus_tag="EYO87_06015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007427859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HIC65542.1"
                     /translation="MRFKTFAAFVAPSLLMMLLFIAIPLFSVFTQSFYVTQPIFERVE
                     VESCTPGFPNPVCTTRTSSRPKLDEDGKTVTETRFVGLQSYRNLIQPDRVRAAVAAGS
                     WSQLMTIDFWRALRFTLFFTLVTLPMVIVLGLTIAMAVNNAVRSIRGPVIFISLLPFI
                     ITPIIGGLSIRWLFIGDGIVTRFMEWLTSQNISMFSQAWTLELMMVIYRVWAVAPFAF
                     VIFYAGLQTVNRDTLESAIVDGANRWERLRYVIVPHLMPLIIFVALIHLMDSYRVFEE
                     IIAFSSQSYVISLQWLTYDLLTPDQSGNRAISRASASAMLTMVGIVILLIWPLRRTWR
                     EHKGRT"
     gene            complement(1753..2973)
                     /locus_tag="EYO87_06020"
     CDS             complement(1753..2973)
                     /locus_tag="EYO87_06020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013960453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HIC65543.1"
                     /translation="MMLRKMLLAGAFALTGVAASAECSEQNDTPISLLAAGFEAWKAV
                     ADEMAECGNFSAELDQEFRTKQPAAFAANPPLYQLGGVSNGTITPLVNEGTIRPLDDL
                     VAKYGQDLSPNQLIRIDGKIMAIAMMVNTQHLQYRADILKDLGIAVPTTWDEVLAAAE
                     KIKEAGVVDYPLGATMKSGWDLGEDFINMFYGYGGQLVDENNMPTVDNEAGINALETM
                     KAITAYLDPEYLVSDSTYVQQQFQQGKIAMANFWASRAGAADVEGESQVVGLVETAAA
                     PRAVPDGPPATTIWWDGLVIARNISDAQAEAAFKLIVAGLSPEMVKANNGAAIWLIPG
                     YEPTRLAKGAIDTLNAQPPAAAYPSTTAMGLMHTALGNNVSDFLTGARDARATLAGIE
                     ADYTTSAKEAGLIR"
BASE COUNT          610 a         1010 c          987 g          565 t
ORIGIN      
        1 accgaatgcg gcagtgcccg aaagactagc gccacgatca gcaaccagaa cgccaggttc
       61 gatcccgacc gcgagaggcc gtagcccgcc agcgttccga ccgtcagcga aatcgtgacg
      121 acgccaccgg tcacgatcat cgagttgatg aaatttcggt agaactggtt ttcgacccag
      181 acggcgcggt agttttcggt cgtcaggccg atgatcggct ggcccagggt gcctgcaatg
      241 gcgttcagcc cggccagaag gaccggcagc agcacgaaga agaccagcac gaaggtcagc
      301 gcatagccca tcaccgcgat gatccagccc aggatgatcg tgccgggccg gctgaaacgg
      361 tccaccatcc gaggcagcca gccaaaggca aggcgaaacg aaagccacag caggccaagg
      421 cccagaacga tatcgatgat cgacaacccg ttcccctcgg cccgggtccg cggtccgaaa
      481 atcaccgcca gcgggttggg cgagaaggca tcgaccgggc tcttgaagct catcaccgtg
      541 atccagaaga tcgggaaggc cgccagcagg caccacagga tcagaaaacc ggccgaggtc
      601 aggcgcaggc caagcggctg ttgcagggct ttcgcattcg ccatgtcacg tccttccctt
      661 gtgttcgcgc caggtgcggc gcaacggcca gatcaacagg atcacgatgc ccaccatcgt
      721 cagcatggcc gaggcggagg cgcggctgat cgcgcgattg cccgactggt ccggcgtcag
      781 caggtcgtag gtcagccatt gcagcgagat gacgtagctc tgcgacgaga aggcgatgat
      841 ctcctcgaac acgcgatagc tgtccatcag atgaatgagc gccacgaaga tgatcagagg
      901 catcagatgc ggcacgatca catagcgcag tcgttcccac cggttcgcgc catcgacaat
      961 ggccgattcc agcgtgtccc gattgacggt ctgaagcccg gcatagaaga tcacgaatgc
     1021 gaagggcgcg acagcccaga cgcgatagat caccatcatc agttccagcg tccaggcctg
     1081 cgagaacatc gagatgttct gcgaggtcag ccattccatg aaccgggtca cgattccgtc
     1141 gccgatgaac agccagcgaa tcgacaaccc gccgatgatc ggcgtgatga tgaagggcag
     1201 cagcgagatg aagatcaccg gcccgcggat cgagcggacc gcgttgttca ccgccatcgc
     1261 gatcgtcagt cccagcacga tcaccatggg cagggtgacc agcgtgaaga acagcgtgaa
     1321 gcgcagcgcc cgccagaagt cgatggtcat cagctgcgac cagcttccgg ccgccacggc
     1381 cgccctgacc cgatcgggct ggatcaggtt gcgatagctt tgcagaccga cgaaccgtgt
     1441 ctcggtcacg gtcttgccgt cttcgtccag cttggggcgg ctgctggtcc gggtggtgca
     1501 gaccggattc gggaaaccgg gcgtgcagct ttcgacctcg acccgttcga agatgggctg
     1561 ggtgacgtaa aagctctgcg tgaagacgct gaacagcggg atggcgatga agagaagcat
     1621 catcaacagc gagggcgcga cgaaggccgc gaatgtcttg aacctcatgg tttgcacctt
     1681 tcccgctcgg ccggccgcga cccgtgacgt ttcccggccg gagcggacat gtgccgcgcc
     1741 ggccggcttc ccttacctga tcaacccggc ttccttggcc gaggtggtgt agtccgcctc
     1801 gattccggcc agcgtggccc gggcatccct ggcgccggtc aggaaatcgc tgacattgtt
     1861 gccaagcgcg gtatgcatca gtcccatcgc ggtggtcgag ggataggcgg cggcaggagg
     1921 ctgggcgttc agcgtatcga tcgcgccctt ggccagtcgg gtcggctcgt atcccggtat
     1981 cagccagatc gccgcgccgt tattggcctt gaccatctcg gggctgagac cagccacgat
     2041 cagcttgaag gcggcctcgg cctgggcgtc gctgatgttc ctggcgatca ccagaccgtc
     2101 ccaccagatc gtcgttgcgg gcggtccatc ggggacggcg cgcggtgcgg ccgcggtctc
     2161 cacaaggccc acgacctgac tttcaccctc gacatcggca gccccggcgc ggctggccca
     2221 gaaattggcc atggcgatct tgccctgctg gaactgctgc tggacatagg tggaatccga
     2281 taccagatat tccggatcca gataggcggt gatggccttc atcgtctcaa gcgcgttgat
     2341 gccggcctcg ttgtcgaccg tcggcatgtt gttttcgtca accagctggc cgccatagcc
     2401 gtagaacatg ttgatgaaat cctcgcccag atcccagccc gacttcatcg tcgcgcccag
     2461 cgggtaatcg acgacgccgg cttccttgat cttttcggcg gctgccagga cctcgtccca
     2521 ggtggtcggc accgcgatgc ccagatcctt caggatgtcg gcgcggtatt gcagatgctg
     2581 ggtgttcacc atcatcgcga tcgccatgat cttgccgtcg atgcggatca actggttggg
     2641 cgacagatcc tggccgtatt tcgcgaccag atcgtccaag ggccggatcg tgccttcgtt
     2701 gaccaggggc gtgatcgtgc cgttcgacac gccacccagc tgatacagcg gcgggttcgc
     2761 cgcgaaggcc gccggctgct tggtgcggaa ttcctggtcc agctcggccg agaaattgcc
     2821 gcattcggcc atttcgtcgg cgaccgcctt ccacgcctcg aagccggcgg caagaaggct
     2881 gatcggggtg tcgttctgtt cgctgcattc ggctgacgcg gcgacacccg tcagcgcgaa
     2941 tgcgcccgcc agcagcattt tcctaagcat cattcgtcct ctccctgtct gccgcatccg
     3001 ctattcgtgc ggcggtcttg cggatccctg tcctgccacg attcgatcgc cggtcgtggc
     3061 gtcgaacagg tggcagatat cggcgggaac cgagaacgag accgcatccc cgatctcggc
     3121 ccggtattcc ttgccggcct tgaccgacac catctcgccg ccggcacgca cc
//
LOCUS       DTVW01000453            1180 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1556119, whole
            genome shotgun sequence.
ACCESSION   DTVW01000453 DTVW01000000
VERSION     DTVW01000453.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1180)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1180)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1180
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1556119"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..212)
                     /locus_tag="EYO87_06025"
     CDS             complement(<1..212)
                     /locus_tag="EYO87_06025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010395680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LuxR family transcriptional regulator"
                     /protein_id="HIC65544.1"
                     /translation="MSSRADINAALRKLGKTAPSGYFVGLHIRFAAPLMQFQTYSDEW
                     SEFYSANGYALRDPTIAWGFSTTGACR"
     gene            308..514
                     /locus_tag="EYO87_06030"
     CDS             308..514
                     /locus_tag="EYO87_06030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65545.1"
                     /translation="MSLDGQSSSLADRLHQQLLALYQRGDLDHAEFDEAWAAIKCHIL
                     APHSGLNAAESNKNTPPPVWQRGL"
     gene            complement(533..958)
                     /locus_tag="EYO87_06035"
     CDS             complement(533..958)
                     /locus_tag="EYO87_06035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008557568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="HIC65546.1"
                     /translation="MRHARGYRRLNRTHEHRKALFANMAGSLIEHEQIKTTLPKAKEL
                     RPIVEKMITLAKRGDLHARRQAAAQLKQDGHVAKLFDELGARYKDRQGGYVRVLKAGF
                     RYGDMAPMAIIELVDRDPSAKGSSDRARLEAESAVSDDQ"
     gene            complement(1069..>1180)
                     /locus_tag="EYO87_06040"
     CDS             complement(1069..>1180)
                     /locus_tag="EYO87_06040"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011909467.1"
                     /note="catalyzes the transcription of DNA into RNA using
                     the four ribonucleoside triphosphates as substrates.
                     Dimerization of the alpha subunit is the first step in the
                     sequential assembly of subunits to form the holoenzyme;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha"
                     /protein_id="HIC65547.1"
                     /translation="EIKEVLSGMGLHLGMDVVDWPPENIEDLAKRFDDQF"
BASE COUNT          222 a          343 c          359 g          256 t
ORIGIN      
        1 cgacaggccc ccgtcgtcga aaacccccag gcgattgtcg ggtcacgcag tgcgtagccg
       61 ttggcggaat agaattccga ccattcatcg gaataggtct gaaattgcat gagaggagcg
      121 gcaaaacgga tgtgcagtcc gacaaaatag ccggatgggg cggtcttgcc cagtttccgc
      181 aaggcggcat ttatgtctgc gcgtgatgac atggcttttt agacaaattg ttttccgata
      241 cgtcaacgtg cacactagtc atggcgcaga atagttgcca tagcgttaat ccgttggagc
      301 cggttgtatg agccttgacg gccaatcgtc atctctggcc gacaggcttc accagcaatt
      361 gctggcgctt tatcaacggg gcgatctgga tcacgcagaa ttcgacgagg catgggcggc
      421 gataaaatgt cacatcctcg cgccacattc gggacttaac gctgcggaaa gcaacaaaaa
      481 taccccgccg ccggtgtggc aacggggtct ctgattcggt gatcgtgcga ctttactgat
      541 cgtcgctcac agccgattcg gcttccagac gcgcccgatc agacgaacct ttggccgacg
      601 ggtcgcggtc gaccagttcg atgatcgcca tcggggccat gtcgccgtaa cggaagccgg
      661 ccttcaagac gcggacataa ccgccctgac gatccttgta gcgggcaccc agttcgtcga
      721 acagcttggc gacgtggccg tcctgcttca gttgggccgc ggcctgacgg cgggcatgaa
      781 ggtcgccgcg cttggccagc gtgatcatct tttcgacgat cggacggagt tccttggctt
      841 ttggcagggt ggtcttgatc tgctcgtgct cgatcagcga gccagccatg ttggcgaaca
      901 gcgccttgcg gtgttcgtgg gtacggttga ggcggcgata gccgcgggcg tgacgcatga
      961 tgttctccta cagcgtgttt tgctttgtcc ggcaacccat gcgtgcgggt cgctctcctt
     1021 ggggcggatg cccggtcaca ggcggggacg gtgcccccgc cctcttgctc agaactggtc
     1081 gtcgaaccgc ttggccagat cctcgatgtt ctccggcggc caatcgacca cgtccatgcc
     1141 cagatgcagg cccatgcccg acagcacttc cttgatctcg
//
LOCUS       DTVW01000454            3459 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1556704, whole
            genome shotgun sequence.
ACCESSION   DTVW01000454 DTVW01000000
VERSION     DTVW01000454.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3459)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3459)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3459
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1556704"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            2..745
                     /locus_tag="EYO87_06045"
     CDS             2..745
                     /locus_tag="EYO87_06045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018001008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase M48"
                     /protein_id="HIC65548.1"
                     /translation="MGGGLLLGVAACAPIQNAAPTTVAAPASPYQGTPRAPVLVSDGS
                     PQSAARTFVGVMRRMEPAVERECRQRRTQPINCDFQFVVDDRPGLEPNAFQTTDDQGR
                     PIIGFTLSLIAATRNSDEIAFVVGHEVSHHILNHLDRKSGAAAAGAVILGSIASVYGN
                     NQQAIETAQRIGASVGSRYYSKNWELQADYLGAIISLAAGYDPVNGARFFERIPDPGD
                     HVLGTHPARAARLAQVRRAVDDVSSGRVR"
     gene            751..2049
                     /locus_tag="EYO87_06050"
     CDS             751..2049
                     /locus_tag="EYO87_06050"
                     /inference="COORDINATES: protein motif:HMM:PF10011.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2254 domain-containing protein"
                     /protein_id="HIC65549.1"
                     /translation="MATGQQVGQLRWRLQELSQRVWVRVTAFAVLGVMTAVAGFAVKG
                     LIPGDLPAKIGADAIESILQILASSMLAVTTFSLSILTAAYAAAGRTATPRAVPLLVS
                     DSVSQTVLATFIGAFVFSLVSIILLKTEIYGESGRLILFAVTLLVVLIVIASLLRWID
                     RLGRLGRVGDTLVRVSHTAEEAFCKRLEAPWLGANPLRGAVPERAVPIFVDRVGHVQH
                     CDIPALSRIAEENELLIYLEATPGDFIHPAAAALHVEGLPADPDKAGSLRDKLCGCLT
                     IRDRRDFRQDPRFGLQVLSEIAQRALSPAVNDPGTANLAAEQIFKVLSNWRDETAPVV
                     EFRRLFIPSLTASNLLEDAFLPIARDGADNWQVQRKLQNLLLGLSRLAPGIFAKVASD
                     LSAQMLAMQGDRVANAPQAGELTEISQDIAVIAQSSSGKS"
     gene            2209..2487
                     /locus_tag="EYO87_06055"
                     /pseudo
     CDS             2209..2487
                     /locus_tag="EYO87_06055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010392771.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(2563..3123)
                     /gene="ilvN"
                     /locus_tag="EYO87_06060"
     CDS             complement(2563..3123)
                     /gene="ilvN"
                     /locus_tag="EYO87_06060"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018001010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase small subunit"
                     /protein_id="HIC65550.1"
                     /translation="MNALNIQQGMSSHSAYDLRDPNSQVEESHTLSVLVENEPGVLAR
                     VIGLFSGRGYNIDSLTVAEVDHNGHQSKITLVTSGTPQVIEQIKAQLGRIVPVHEVHD
                     LTVEGASVERELGLFKVKGQGDKRVEALRIGDIFRANVVDSTLESFVFELVGTPAKLD
                     AFADLMRPLGLVDLARTGVAALSRGA"
     gene            complement(3184..>3459)
                     /locus_tag="EYO87_06065"
     CDS             complement(3184..>3459)
                     /locus_tag="EYO87_06065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase 3 large subunit"
                     /protein_id="HIC65551.1"
                     /translation="RYSQSWSDSLPDFVKLAEAFGCKGAQVRDPADLDDAIGQMIEYD
                     GPFILDVLVEKHENCFPMIPSGKPHNEMLLGDADTQDAIQSQGAVLV"
BASE COUNT          613 a         1107 c         1074 g          665 t
ORIGIN      
        1 cctgggcggc gggctgctgc tgggggtggc ggcctgcgcg ccgatccaga atgccgcccc
       61 cacgaccgtg gccgccccgg cctcgcccta tcagggcacc ccgcgcgccc cggttctggt
      121 cagcgacggc tcgccccagt cggccgcgcg caccttcgtc ggcgtcatgc gccgcatgga
      181 acccgcggtc gaacgagaat gtcgccagcg gcgcacccag ccgatcaact gtgatttcca
      241 gttcgtcgtc gatgaccgtc cggggcttga accgaacgcc ttccagacca ccgacgacca
      301 gggccggccg atcatcggct tcaccttgtc gctgatcgcg gcgacgcgca atagcgacga
      361 gatcgccttc gtcgtcgggc acgaggtcag ccaccacatc ctgaaccatc tcgaccgcaa
      421 gtcgggggcc gcggcggcag gggcggtgat cctgggcagc atcgcgtctg tctatggcaa
      481 caaccagcag gcgatcgaga cggcgcagcg gatcggcgcc tcggtcggat cgcgctatta
      541 ttcgaaaaac tgggaactgc aggccgatta cctgggcgcg atcatctcgc tggcggccgg
      601 ctatgacccg gtcaacggcg cccggttctt cgagcgtatt cccgacccgg gcgatcacgt
      661 cctgggcacc catcccgccc gcgccgcgcg tctggcccag gttcggcgcg cggtggacga
      721 cgtgtccagc ggccgggtgc gataacgcgg atggcaacgg gacaacaggt cggccaactg
      781 cgctggcgtc ttcaggaatt gtcgcaacgg gtctgggttc gcgtcaccgc cttcgcggtt
      841 cttggcgtga tgaccgcggt cgcgggcttc gcggtgaagg ggctgatccc gggcgacctg
      901 ccggccaaga tcggtgccga tgcgatcgaa tcgatcctgc aaatccttgc gtcctcgatg
      961 ctggcggtca cgaccttctc gctgtcgatc ctgacagcgg cctatgccgc ggcgggcagg
     1021 accgcgacac cgcgggcggt gcctctgctg gtttcggatt cggtcagcca gacggttctg
     1081 gcgaccttca tcggcgcctt cgtcttcagt cttgtcagca tcatcctgct gaagacggag
     1141 atatacggag agtccggacg actgattctg ttcgctgtga cgctgcttgt cgtcctgatc
     1201 gtgatcgcct cgctgctgcg ctggatcgac cggctgggcc ggctgggccg ggtcggggac
     1261 acgctggtcc gcgtctctca cacggcagag gaggctttct gcaaacgcct ggaggccccg
     1321 tggctgggcg ccaacccgct gcgaggcgcc gtgccggaaa gggccgtgcc gatcttcgtg
     1381 gaccgcgtcg gtcatgtgca gcattgcgac attccggcgc tgagcaggat cgccgaggaa
     1441 aacgaactgc tgatctatct ggaggcgacg ccgggcgatt tcattcaccc cgccgcggca
     1501 gccctgcatg tcgagggtct tcccgccgat cccgacaagg ccgggtcttt gcgtgacaag
     1561 ctgtgcggct gtctgacgat tcgggacaga cgggattttc gccaggaccc gcgcttcggt
     1621 ttgcaggtcc tgtccgaaat cgcccaacgc gctttgtcac ccgcggtgaa cgatcccgga
     1681 accgccaatc tggcagcaga acagattttc aaggttctca gcaactggcg cgacgagacc
     1741 gcgccggtcg tcgaattccg ccgccttttc attccgtcac tgaccgcatc gaatctgctt
     1801 gaggatgcgt tcctgcccat cgcccgcgac ggggcagaca actggcaggt gcagcgcaag
     1861 ctgcagaacc tcttgctggg tttgtcgcgc ctggcacccg gtatttttgc gaaagtagcc
     1921 agcgatttgt ctgcgcagat gctggcgatg cagggtgatc gtgtggcaaa tgcgccgcaa
     1981 gccggggaac tgactgaaat ttcccaagat attgccgtta tagctcaaag ttctagcgga
     2041 aaatcgtgac gatcccgcac gcaaaagtga aaaaactgcc atacaaggca ataaaacgct
     2101 ggcttatcgg cggatttctg ctttattgca ttaaccgtgt acataacttc gtgtgcgggt
     2161 cacagcttcc acgtgtgtca tcgcggaaaa acgaaagaga gcttgcccat gatcggggtc
     2221 gtcgtctgga gtaatgcaga gcgggagaag gcagtgatct ggtgcgagga tcacgcctct
     2281 ctggcttatc ttcagggacg gcagaacctg atcgccgcag gtcagtggcc ttcgcccggc
     2341 gaccttctgg aacttgaaac cgagatcgtg ggaaatttgc gtcacgcccg caatgtctcg
     2401 ctcgtgtccg aacagggttg caggcaattg ccccagatgt tgcggcattc ctcgaaggcg
     2461 gccccgccgc gtctgaaact cgtggccagc aaccagcagg cgccgagccg cgcggattcc
     2521 gaagacatcg ctccgatccg gatcggggcc tctcgctgaa tttcaggcgc cgcgcgacaa
     2581 cgccgccacg cctgtccggg ccagatcgac caggcccagc ggacgcatca ggtcggcgaa
     2641 agcatccagc ttggcgggcg ttccgaccag ttcgaagaca aagctttcca gcgtcgaatc
     2701 gaccacattg gcgcggaaga tatccccaat tcgcagcgcc tcgacgcgct tgtcgccctg
     2761 acccttcacc ttgaacaggc ccagttcacg ctcgaccgag gcgccctcga ccgtcaggtc
     2821 gtgaacctcg tgaaccggca cgatccggcc cagctgcgcc ttgatctgtt cgatgacttg
     2881 cggcgttccg cttgtgacca gcgtgatctt tgattggtgg ccattgtgat cgacttcggc
     2941 caccgtcagg ctgtcgatgt tgtagccgcg ccccgagaac agcccgatca cgcgggccag
     3001 gacgccgggc tcgttctcga ccagcaccga cagggtgtgg ctttcctcga cctgggaatt
     3061 cggatcgcgc aggtcatagg ccgaatggct ggacatgccc tgctggatat tcaacgcgtt
     3121 catcgctctg cctcttgtct tccgtgcaga aattcgccag cggcgcagat ccgcgacgcc
     3181 atgtcagacc agcaccgcac cctgcgactg gatcgcatcc tgggtatcgg catcgcccag
     3241 cagcatttcg ttatgcggct tgcccgaggg gatcataggg aaacaattct cgtgtttctc
     3301 gaccaggaca tccagaatga acgggccgtc atactcgatc atctgcccga tcgcgtcgtc
     3361 cagatccgca gggtcgcgga cctgcgcgcc cttgcaacca aaggcttcgg ccagtttcac
     3421 gaaatcgggc aggctgtcgg accatgactg gctgtaacg
//
LOCUS       DTVW01000455            1700 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1557383, whole
            genome shotgun sequence.
ACCESSION   DTVW01000455 DTVW01000000
VERSION     DTVW01000455.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1700)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1700)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1700
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1557383"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(803..>1700)
                     /locus_tag="EYO87_06070"
     CDS             complement(803..>1700)
                     /locus_tag="EYO87_06070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019088725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HIC65552.1"
                     /translation="FIADDFKPRVAVSFLGDPQSPAAKEVALYRDALRLGYARLGETG
                     GLIPNSAIIDMFRLLKGRSDGFRVTPGTALKNEKTEEIVFVPPQDAREIVTHMTALER
                     FINDDGLSDLDPLIKMALIHHQFESIHPFPDGNGRIGRILNVLYLTRTGLLDIPVLYL
                     SRFITRNKADYYQHLQDVRDTGNWENWVIYMLEAVAETSATTFEIVTGIRQQMADVKH
                     RLRYELPKIYSQELLNNLFRHPYTRIEYLQKDLDVSRQTAAKYLDTLAERGFVEKHRS
                     GKNNYFINVALVKLFLDVSGGP"
BASE COUNT          353 a          495 c          514 g          338 t
ORIGIN      
        1 cggccgagct tcggatcgcc aaggaaggat accgcaacgc gcggcttgaa atcgtcggcg
       61 atgaacaggg cgaaagggca aggggcgcgg acctggccgc ctgagcccaa ctgaaaccga
      121 ggggcccgcc caagcggagg cctctcaacc atcacaacct tgtcctttga gttcgcgggg
      181 taccaaagga accatcccca aagaaggagt cttcaaccaa gagcatggcc gggaggctcg
      241 cggcgttcca agcatcagcg ggacaatcgg cttcagtcgt aaggggacca tccccggctc
      301 gccatttcct tccttggccc gaatcccgtc ttcgagatca acccgcgagg ggtcggacta
      361 cgggcgagcc cgtgccgccg gatggattcg gacaagccga acgcacccgg tgatgtcagc
      421 cagtcttcgg gcctgcgggg tcctgtcgcg cgagggatgg tcccccgcct ccaagacggg
      481 agccaaacag atgtcccgca aagatgcaca cgccttcgcc gcctccctcg ccgccacgct
      541 catggtttcg atcgtcgtct tccaagttgg ggatggaatc ttcggcgccg tccctgccga
      601 tgaaatcgac ggcgacgaag ttcaggtact ggttgaggtt gacccgtggg cttaggccca
      661 cggtttccgc caaggttcag attcggcgca agggcgccga cctgagttct acgcctgcca
      721 gtcgccgcag gtgaacgaga cagagtgccg atgcaggccg gcagatcgtc accttcctcg
      781 aattgtcagg ctagtcagag tcctacgggc cgcccgagac gtctaggaag agtttcacca
      841 aggcgacgtt gatgaagtag ttattcttcc cagaccggtg cttttccaca aagccccgct
      901 ccgccaaggt gtcgagatac ttcgcagcgg tttgtctgct gacatccaga tccttctgca
      961 ggtattcgat ccgcgtgtaa gggtggcgga agagattgtt cagcagttcc tggctgtaga
     1021 tcttgggcaa ctcataccgc agccgatgct tgacgtccgc catttgctgc cggataccgg
     1081 taacaatctc gaaggtcgtc gcagaggtct ctgcaacggc ctcgagcatg tagatgaccc
     1141 agttctccca gtttccggta tcacgcacgt cttgcaggtg ctgatagtag tccgccttgt
     1201 tgcgagtaat gaaacgcgac aggtacagca cggggatgtc gagcaacccg gtgcgggtaa
     1261 ggtagaggac attcagaatg cggccgattc gcccgtttcc gtctggaaag gggtggatgc
     1321 tttcgaattg gtggtggatg agcgccatct tgatcagcgg atcaaggtcg ctgagaccgt
     1381 catcgttgat aaaccgttcc aacgcggtca tgtgggtgac gatctcgcgc gcatcctgag
     1441 gcggcacaaa gacgatctct tcggtcttct cgttctttag ggcggttccc ggtgttactc
     1501 gaaacccatc actacgccct ttcagcagac gaaacatgtc gatgatcgct gagttgggga
     1561 tcaaaccgcc ggtttcaccc aaccgtgcat agccaagccg gagagcatcg cgataaaggg
     1621 cgacctcttt ggccgcaggg gattgcggat cgccaaggaa ggataccgca acgcgcggct
     1681 tgaaatcgtc ggcgatgaac
//
LOCUS       DTVW01000456            4700 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1558207, whole
            genome shotgun sequence.
ACCESSION   DTVW01000456 DTVW01000000
VERSION     DTVW01000456.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 4700)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4700)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4700
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1558207"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            42..779
                     /locus_tag="EYO87_06075"
     CDS             42..779
                     /locus_tag="EYO87_06075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011746983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01620 family protein"
                     /protein_id="HIC65553.1"
                     /translation="MIGMALFGLFTLAALGMAWREYRAWARFAKIDAIQRQAGAALAD
                     DSLDQARRVVDDLLRLYHKRPQMEWGRKRLADNRADAFDTRTLLTMAETELLAALDQE
                     ARREIEAASRTVAAATALIPLALADVAAALAANLRMIRRMAEIYGGRAGAVGGWRLAR
                     TVMTHLVATGAVAAGDDLIHTVAGGGVLAKVSRRFGEGVVNGALTARVGIAAMEVCRP
                     LPFMAQPRPKVGNLVTRGLRGLFGDDR"
     gene            complement(851..1852)
                     /locus_tag="EYO87_06080"
     CDS             complement(851..1852)
                     /locus_tag="EYO87_06080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010393260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HIC65554.1"
                     /translation="MGALTLANVTKRFGKAEVIRGVDLSVEPGEFCVFVGPSGCGKST
                     LLRMIAGLEDVTSGDVLIEGRRMNDVAPARREIAMVFQTYALYPHLSVRDNMGLALKQ
                     LGTPRAQIVEAADKAAGMLDLAPLMDRRPAELSGGQRQRVAIGRAIVRTPRLFLFDEP
                     LSNLDAALRVATRIEIARLHRELGATMVYVTHDQVEAMTLADKIVVLRDGRVEQIGRP
                     MDLYNDPDNTFVAGFIGSPQMNFLKARLLGLGFETLGIRPEHLAISAGAGQIEGQVSH
                     LEKLGGETLTYVRTEDHGLLTVRQFGEHDHPVDGTVRVTPDQERAFRFDAEGRRLRD"
     gene            complement(1864..2883)
                     /locus_tag="EYO87_06085"
     CDS             complement(1864..2883)
                     /locus_tag="EYO87_06085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HIC65555.1"
                     /translation="MRVMIAGMGNMGISHALACHESPDFRIVGLVNRSIPDLPDSLRD
                     YPLSHDYAEALARLKPDLVVIATYSDSHADFAVAAMRAGAHVFVEKPLATNVADARRV
                     VDCAAATGRKLVVGYILRHHPGWQRLIAEARALGGPFVFRLNLNQQSSGPSWAVHKAL
                     MRTTSPIVDCGVHYVDVMCQITDAAPVEVRGMGLRLSDEIAPDMYNYGHFQVLFADGS
                     VGWYEAGWGPMMSDAAFFVKDVVSPNGAVSIRMPADARSDDIDTHTQTSTLRIHRVGR
                     EHEDLSMQGEPGHQELCDAELAFVARAIAGDLDLTRHMQDAVQSLAVCLAADESVRSG
                     APVKL"
     gene            complement(2883..3719)
                     /locus_tag="EYO87_06090"
     CDS             complement(2883..3719)
                     /locus_tag="EYO87_06090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_384302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HIC65556.1"
                     /translation="MSARHSPARSIAAHAILILYTLIALFPVFVIVINSFKSRRAIFA
                     QPLSLPTSETFDLIGYRTVLKQGDFLQYFQNSMIVTLASLFFVLLFGAMAAFALSEYR
                     FRGNLLMGLYLALGIMIPIRLGTVAILQMMVASGLVNTLTSLILVYTAQGLPLAVFIL
                     AEFMRGVSDDLKNAGRIDGLSEYRIFLRLVLPLIRPAMATVAVFTMIPIWNDLWFPLI
                     LAPSEATKTITLGSQVFIGQFVTNWNAVLAALGLAIVPVLVLYLIFSRQLIRGITAGA
                     VK"
     gene            complement(3730..4647)
                     /locus_tag="EYO87_06095"
     CDS             complement(3730..4647)
                     /locus_tag="EYO87_06095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HIC65557.1"
                     /translation="MARRKEFRWHIAVFLAPAVLVYTAIMIVPLIGTLNLALWGESEA
                     GPVFVGLRNFATLFGDPRWSASFWNALANNAWFFLVHMLVQNPVGVMLAALLSSPRLR
                     MAAFYRTAIFIPTILSFVIVGFVWKLILSPIWGIAPGMLDAVGLKALFAPWLGKEQYA
                     LTTLALISVWQFVGIPMMLIYAALLSIPDEVIEAAEMDGVTGWAQFRKIKLPLILPAI
                     GIISILTFVGNFNAFDLIYVTQGALAGPDFSTDILGTFLYRTFFGFQLQLGDPNVGAA
                     IATAMFGIILVGVCLYLFGIQTRLRRYQF"
BASE COUNT          897 a         1594 c         1468 g          741 t
ORIGIN      
        1 ccatccagaa gcctccgcgc ttacccagca gcaggtagga aatgatcggg atggccctgt
       61 tcgggctgtt cacgctggcc gcgcttggca tggcatggcg cgaatatcgg gcctgggccc
      121 ggttcgcgaa gatcgacgcc atccagcgac aggcaggtgc cgcgctggcc gacgacagct
      181 tggatcaggc ccgccgggtc gtggacgatc tgctgcgcct gtatcacaag cgcccgcaga
      241 tggaatgggg ccgcaagcgg ctggccgaca atcgggccga tgccttcgac acgcgcacgc
      301 tgctgacgat ggccgagacg gaattgctgg ccgcgctgga ccaggaggcg cggcgcgaga
      361 tcgaggcggc atcccggact gtggcggcgg cgacggcgct gatcccgctg gccctggccg
      421 atgtcgcggc ggcgctggca gccaatctgc gcatgatccg ccgcatggcc gagatctatg
      481 gcggccgcgc cggcgcggtc ggaggatggc ggctggcacg gacggtgatg acccatctgg
      541 tcgcgaccgg cgccgtggcg gcgggcgatg atctgatcca cacggtcgcg ggcggtggcg
      601 ttctggccaa ggtcagccgc cgcttcggcg agggcgtggt gaacggcgcc ctgacggcgc
      661 gcgtcggcat cgccgccatg gaggtctgcc gccccctgcc cttcatggcc cagccccgcc
      721 cgaaggttgg caacctggtc acacgcgggc tgcgcgggct gttcggcgac gacaggtagt
      781 caccggttgc gctgttgtcg tggaaccatt caggggatga ccagcccgcc atcggggcga
      841 tcgcgcccgg tcagtcccgc agccgcctgc cttccgcgtc gaaccggaac gcccgttcct
      901 gatcgggcgt gacccggacc gtgccatcca cgggatggtc gtgctcgccg aattgccgca
      961 cggtcagcag gccgtgatcc tcggtgcgca cataggtcag cgtttctccg cccagctttt
     1021 ccagatggct gacctgcccc tcgatctgcc cggccccggc cgagatcgcc agatgttcgg
     1081 ggcggatccc cagtgtctcg aaccccagcc ccagaagccg ggccttcagg aaattcattt
     1141 gcggcgagcc gatgaagccc gcgacgaagg tgttgtcggg atcgttgtac agatccatcg
     1201 gccggccgat ctgttcgacc cgcccgtcgc gcagaaccac gatcttgtcc gccagcgtca
     1261 tcgcctcgac ctgatcgtgg gtgacataga ccatcgtcgc gcccagttcg cgatgcagcc
     1321 gcgcgatctc gatccgggtg gccacgcgca gggcggcgtc caggttggac aacggctcat
     1381 cgaacaggaa cagcctgggc gttcgcacga tggcccgccc gatggcgacc cgctgccttt
     1441 gcccgcccga caattccgcg ggcctgcgat ccatcagcgg tgccagatcc agcattccgg
     1501 cagccttgtc ggcggcctcg acgatctgcg ccctgggcgt gccaagctgt ttcagcgcca
     1561 gccccatgtt gtcgcgcaca ctgagatggg gataaagcgc ataggtctgg aacaccatgg
     1621 cgatttcccg cctggccggg gccacgtcgt tcatccgccg cccctcgatc agcacatcgc
     1681 ccgaggtcac gtcttccagc cccgcgatca tccgcagaag cgtcgacttg ccacatccgg
     1741 acgggccgac gaagacgcag aactcgcccg gttccacgct cagatccacg cccctgatga
     1801 cctcggcctt gccgaagcgc ttggtgacat tcgccagtgt cagcgcgccc atcgccgccc
     1861 ccttcacaac ttgaccggcg cgccgctgcg cacgctttca tccgccgcaa ggcagaccgc
     1921 cagcgattgc acggcgtcct gcatgtgccg cgtcaggtcc agatccccgg cgatcgcccg
     1981 cgcgacgaag gccagttcgg catcgcacaa ttcctggtgt cccggctcgc cctgcatcga
     2041 cagatcctcg tgctcccgcc ccacgcgatg gatgcgcagg gtcgaggtct gcgtatgcgt
     2101 gtcgatatcg tccgaccgcg catcggccgg catccggatc gagacagcgc cgttcgggct
     2161 gaccacgtcc ttcacgaaaa acgcggcatc cgacatcatc ggcccccatc cggcctcgta
     2221 ccagccgacc gagccatccg cgaacagaac ctggaaatgg ccgtaattat acatgtccgg
     2281 cgcgatctcg tccgacagcc gcagccccat gccccgcacc tcgacggggg ccgcatcggt
     2341 gatctggcac atcacatcga cataatgcac cccgcaatcg acgatgggcg aggtcgtccg
     2401 catcagcgcc ttgtgcaccg cccaggacgg cccgctgctt tgctggttca ggttcaggcg
     2461 gaacacgaag ggtccgccaa gcgcgcgggc ctcggcgatc agccgctgcc agccgggatg
     2521 gtggcgcagg atatagccca cgaccagctt gcgcccggtg gcggcggcac aatccaccac
     2581 ccgccgcgca tccgccacat tcgtcgccag cggcttttcg acaaagacat gcgcccccgc
     2641 ccgcatcgcc gccaccgcga aatcggcatg gctgtcggaa taggtcgcga tcaccaccag
     2701 atcgggtttc agacgcgcca acgcctcggc atagtcatgg ctcagcggat aatcccgcag
     2761 cgaatcgggc agatcgggaa tactgcgatt gaccagcccg acgatccgga aatcagggct
     2821 ttcgtgacag gccagcgcgt ggctgatacc catgttgccc attccggcga tcatgacacg
     2881 gatcatttga cggctcctgc ggtgatgccg cgaatcagct ggcgcgagaa gatcagatac
     2941 aggaccagca ccggcacgat ggccagccca agcgccgcca gaaccgcgtt ccagttggtg
     3001 acgaactgcc cgatgaagac ctgacttccc agcgtgatcg tcttggtcgc ctcggaaggc
     3061 gccaggatca gcggaaacca caggtcgttc cagatcggga tcatggtaaa cacggcgacc
     3121 gtggccatcg cggggcggat cagcggcagg accagccgca ggaagatgcg gtattccgac
     3181 aacccgtcga tccgcccggc attcttcaga tcgtcggaca cgccgcgcat gaattcggcc
     3241 aggatgaaca ccgccagcgg cagcccctgc gcggtataga cgagaatcag cgaggtcagg
     3301 gtgttgacca gccccgaggc caccatcatc tgcaggatcg ccaccgttcc cagccggatc
     3361 gggatcatga ttccaagcgc cagatacaac cccatcagca ggttgccgcg aaaccggtat
     3421 tccgacaggg caaaggcggc cattgcgccg aacagcagca cgaagaacag gctggccagg
     3481 gtcacgatca tcgaattctg gaaatattgc aggaaatcgc cctgtttcag caccgtccga
     3541 tagccgatca gatcgaaggt ctcggatgtc ggcagcgaca gcggttgggc aaagatcgcg
     3601 cggcgcgact tgaaactgtt gatgacgatc acgaagaccg ggaacagcgc gatcagggta
     3661 tacaggatca ggatcgcatg ggcggcgatg ctgcgggcgg gggaatgtct tgcgctcatg
     3721 cccgcatcct cagaactggt atcgccgcag ccgggtctgg atcccgaaca ggtacaggca
     3781 gacaccgacc aggatgatcc cgaacatcgc cgtcgcgatc gccgccccca cgttgggatc
     3841 gcccagttgc aactggaagc cgaagaaggt gcgatagagg aacgttccca ggatgtcggt
     3901 cgagaaatcc ggtcccgcca gcgccccctg cgtcacgtag atcagatcga aggcgttgaa
     3961 atttcccacg aaggtcagga tcgagatgat cccgatcgcg ggcaggatca gcggcagctt
     4021 gatcttgcgg aactgcgccc agccggtgac gccgtccatc tcggccgcct cgatcacctc
     4081 gtcggggatc gacagcagcg cggcatagat cagcatcatc gggatgccga cgaactgcca
     4141 gaccgagatc agcgccagcg tcgtcagtgc atattgctcc ttgcccagcc agggcgcgaa
     4201 cagcgccttc aggcccaccg cgtccagcat cccgggcgcg atgccccaga tcggcgacag
     4261 gatcagcttc cagacgaagc cgacgatgac aaaggacagg atcgtcggaa tgaagatcgc
     4321 ggtgcgatag aaggccgcca tccgcagacg tggcgatgac agcagcgccg ccagcatcac
     4381 gcccaccgga ttctgcacca gcatgtgcac cagaaagaac caggcattgt tggccaaggc
     4441 gttccagaac gatgccgacc accgcggatc gccgaacagg gttgcaaagt tccgcagacc
     4501 gacgaagacc ggccccgcct cgctttcgcc ccacaaggcc aggttcagcg tcccgatcag
     4561 cggcacgatc atgatcgccg tataaaccag caccgcgggc gccagaaaca ccgcgatatg
     4621 ccagcggaac tcctttcgcc gggccacgcc tcacctcttc ttcgttgcga aaataccctc
     4681 ggggggtccg gggggcggaa
//
LOCUS       DTVW01000457            1128 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1558716, whole
            genome shotgun sequence.
ACCESSION   DTVW01000457 DTVW01000000
VERSION     DTVW01000457.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1128)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1128)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1128
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1558716"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            159..>1128
                     /locus_tag="EYO87_06100"
     CDS             159..>1128
                     /locus_tag="EYO87_06100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002721116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HIC65558.1"
                     /translation="MSAPLTLTTHAAIVQIPAATWDRLGDGNPFTSHRFLSALESSRS
                     VGTGSGWQPLHLTVERDGQIVGAAPLYAKSHSQGEYIFDHAWAQAYARAGGRYYPKLQ
                     CAVPFTPATGTRLLSPDPGVRQALLAGMTQIAERGGASGVHVTFCTEAEAELGEAAGF
                     LPRVTQQFHWLNRGYGSYDDFLAALSSRKRKALRKERQRAQEFGGRIVHLTGDDLKPH
                     HWDAFWAFYQDTGGRKWGTPYLTRAFFDRIHDTMRDDILLVMAESDGRPIAGALNFLG
                     PDAVYGRYWGCVEDHAFLHFELCYHQAIDHAIAHGLSRVEAGAQGEH"
BASE COUNT          181 a          403 c          361 g          183 t
ORIGIN      
        1 gctggccagc gatgccgccc gctacgtcag cggcgcgatc ctggatgtca gcggcggacg
       61 ctgaagctgc ccgcgccgca ggcacccgcg agcgatcacg cggcttgtga tcgcgcgccc
      121 cgctgacaag ccgcgcggga agccctagct tcgggggcat gagcgcgccc cttaccctca
      181 ccacccatgc ggccatcgtc cagatccctg ccgcgacatg ggaccggctt ggcgacggca
      241 acccctttac cagtcaccgc ttcctgtcgg cgctggaatc ctcgcgctcg gtcgggacgg
      301 gcagcggctg gcagcccttg catctgaccg tcgaacgcga cggccagatc gtcggtgcgg
      361 cgccgcttta cgccaaatcg catagtcagg gcgaatatat cttcgatcat gcctgggcgc
      421 aggcctatgc gcgggcgggc gggcgctatt atcccaagct gcaatgcgcc gtgcccttca
      481 cgcccgccac cggcacgcgg cttctgtcgc ccgatccggg cgtgcgtcag gcgctgctgg
      541 cgggcatgac ccagatcgcc gaacgtggcg gggcatccgg cgtccacgtc accttctgca
      601 ccgaggccga ggccgaactg ggcgaagccg caggctttct gccgcgcgtc acgcagcagt
      661 ttcactggct caaccgcggc tacggcagct atgacgattt cctggccgcg ctgtcgtcac
      721 gcaagcgcaa ggcgttgcgc aaggaacgcc agcgggcgca ggaattcggc ggccgcatcg
      781 tccatctgac cggcgacgat ctgaaaccgc atcactggga cgccttctgg gccttctatc
      841 aggataccgg cgggcgcaaa tggggcacgc cctacctgac ccgcgccttc ttcgaccgca
      901 tccacgacac gatgcgcgac gacatcctgc tggtcatggc cgaaagcgac ggccgcccga
      961 tcgcgggggc gctgaatttc ctggggcccg atgccgtcta tggccgctac tggggctgcg
     1021 tcgaagacca cgccttcctg catttcgaac tgtgctacca tcaggccatc gaccacgcga
     1081 ttgcccatgg cctgtcgcgt gtcgaggccg gcgcgcaggg cgaacaca
//
LOCUS       DTVW01000458            1814 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1559773, whole
            genome shotgun sequence.
ACCESSION   DTVW01000458 DTVW01000000
VERSION     DTVW01000458.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1814)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1814)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1814
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1559773"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..538
                     /locus_tag="EYO87_06105"
     CDS             <1..538
                     /locus_tag="EYO87_06105"
                     /EC_number="1.1.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010399589.1"
                     /note="catalyzes the formation of D-ribulose 5-phosphate
                     from 6-phospho-D-gluconate; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="NADP-dependent phosphogluconate dehydrogenase"
                     /protein_id="HIC65559.1"
                     /translation="ARNVSARLEERRSWQDRFGAAPQPCRIAPETLEKALIAGKILCY
                     AQGFSMLAAASGKFGWTLELPQIARVWRAGCIIRSAMLNDMAKALSEDPGRNLVLAPD
                     FARLVADGLPALRQVVTQGVGAGHALPALSAGLIWFDMMRTARGTANMIQAQRDFFGA
                     HGFERVDGIDDKHGPWGA"
     gene            complement(542..1042)
                     /locus_tag="EYO87_06110"
     CDS             complement(542..1042)
                     /locus_tag="EYO87_06110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007118310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HIC65560.1"
                     /translation="MSQADPHRVDEALIALRRILRATQLHERELAHAAGLTPAKLRVL
                     QILEGREGGSATPTALAGQMGVSQATVTTLVDQLERRGHAGRHRSHSDRRQTNVVITE
                     RGRQALQTAPDALQQHFVRSFAQMADWEQAMLIANLERAAAMLNADGFDASPVLATGE
                     IHIVPR"
     gene            1264..1806
                     /gene="ectA"
                     /locus_tag="EYO87_06115"
     CDS             1264..1806
                     /gene="ectA"
                     /locus_tag="EYO87_06115"
                     /EC_number="2.3.1.178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011537899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminobutyrate acetyltransferase"
                     /protein_id="HIC65561.1"
                     /translation="MPKDVVNIEPPRRRTLTLRKPESTDGSAIWELIRACKPLDQNSM
                     YCNIVQAEHFRDTCVVAEMEGDIVGWVSGHMIPNEDALFVWQVAVSPKARGLGLGRRM
                     LEHLIGRDACAEASQLNTTITRDNEASWALFRSFARRMGGDLSDEAHYKRDDHFDGQH
                     ATEHMVTITLPDEGDVSSAA"
BASE COUNT          317 a          584 c          589 g          324 t
ORIGIN      
        1 ggcgcgcaat gtttcggccc ggctggagga acggcgcagc tggcaggacc gattcggcgc
       61 cgcgccccag ccctgccgga tcgcgcccga gacgctggaa aaggcactga tcgccggcaa
      121 gatcctgtgc tatgcgcagg gcttttcgat gctggcggcg gcttcgggca aattcggctg
      181 gacgctggaa ctgccgcaga tcgcgcgggt ctggcgggcc ggctgcatca tccggtccgc
      241 gatgctgaac gacatggcaa aggcgctgag cgaggatccc ggccgcaatc tggtccttgc
      301 ccccgatttc gcccggctgg tcgcggacgg tctgccggcc ttgcgtcagg tcgtgaccca
      361 gggtgtcggc gcgggccatg ccctgcccgc cctgtcggcc ggtctgatct ggttcgacat
      421 gatgcgcacc gcgcgcggca ccgccaacat gatacaggcg cagcgcgatt tcttcggcgc
      481 ccacggattc gagcgtgtgg acgggatcga cgacaagcac ggtccctggg gcgcgtaaac
      541 cctagcgcgg gacgatatgg atctcgccgg tcgccaggac cggcgaggcg tcgaaaccat
      601 ccgcgttcag catcgcggcg gcgcgttcca ggttggcaat cagcatcgcc tgttcccaat
      661 cggccatttg cgcgaagctg cgcacgaaat gctgttgcag cgcatcgggg gcagtctgca
      721 atgcctgccg accccgttcg gtgatcacca cattggtctg ccgccggtcg ctgtgcgacc
      781 gatgccgccc ggcatggccg cgccgttcga gctgatcgac cagcgtcgtg accgtcgcct
      841 ggctgacccc catctgtccg gccagggccg tcggtgtggc gctgccgccc tctcgtcctt
      901 cgaggatctg cagaacccgc agcttggccg gggtcaggcc cgcggcatgg gccagttccc
      961 gctcatgcag ctgcgttgca cgcaaaatgc ggcgcagcgc gatcagcgcc tcgtcaacgc
     1021 gatgagggtc ggcctggctc atggcaggat catgccggaa ggcccgatcc ggcgcaatcg
     1081 gcaagtgtcg gcgtaaaata ttttacttga ctaagcgcat ttttgcatgt ctcgcggcac
     1141 aacctccccg aaagccattg aattatagct atttagctgt tttcgcccaa attttccctt
     1201 agatgttgca accggaaggc ggttttacta gttagactgt caaagcaaat gaggacagat
     1261 cacatgccca aggacgtggt gaacatcgaa cccccccgcc gtcggacgct gacgctgcgc
     1321 aagccggaaa gcactgacgg ttcggccatc tgggaactga tccgcgcgtg caagccgctg
     1381 gatcagaatt cgatgtattg caacatcgtg caggccgaac atttccgcga cacctgcgtc
     1441 gtcgccgaaa tggagggtga catcgtgggc tgggtctcgg ggcacatgat ccccaacgag
     1501 gatgccctgt tcgtgtggca ggtggcggtc agcccaaagg cgcgcgggct gggcctcggc
     1561 cggcggatgc tggaacacct gatcggccgc gacgcctgcg ccgaggcgtc gcagttgaac
     1621 accacgatca cccgggacaa cgaggcgtcc tgggcgctgt ttcgcagctt tgcccgccgc
     1681 atgggcggcg atctgtcgga cgaggcgcat tacaagcgcg acgatcactt tgacggtcag
     1741 cacgcgaccg aacacatggt cacgatcacg cttcccgacg aaggcgacgt ctccagcgcc
     1801 gcctgaaggc cgcc
//
LOCUS       DTVW01000459            1603 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1559878, whole
            genome shotgun sequence.
ACCESSION   DTVW01000459 DTVW01000000
VERSION     DTVW01000459.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1603)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1603)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1603
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1559878"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..646
                     /locus_tag="EYO87_06120"
     CDS             <1..646
                     /locus_tag="EYO87_06120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011536962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HIC65562.1"
                     /translation="TWFRGEHTEDFLADPKAPATWRTSGMANGTMGDLAPHMVNGALA
                     LMGPIISVAGSYETVHKTRPGGEVSNDDHAQMMCRFENGAMGQMYFSRIATGRKMGFA
                     YEISGTRGAIRFDQEDQNAIWLYRMEGPEAERGFTRILTGPAHPDYAPFCQGPGHGTG
                     YQDQIIIEARDFLHAIETGQPHWPCFRDGHEVNRVIAAMRASADAGTWTDIKDF"
     gene            665..1558
                     /locus_tag="EYO87_06125"
     CDS             665..1558
                     /locus_tag="EYO87_06125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009465737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="myo-inositol catabolism protein"
                     /protein_id="HIC65563.1"
                     /translation="MTIRIGNAPCSWGVEFAEDPRNPAWRTVLAECAAAGYKGIELGP
                     VGFMPEDPGILSDALEEHGLELIGGVVFRPYHDPEACKDVLDATHRTARALRAHGAQH
                     LVLIDSISPRRAPTAGRAGEAEQMDRAEWIAFRDRIAESARIGAEEYGLTVGIHAHAA
                     GFLDFEPELERLLDEVDETILGICFDTGHHSYAGFDPVAFMKKHIGRISYMHFKDIDP
                     RVKAEAIRNRTGFYDACGQGIFCNLGEGDVDFPAVRQVLLDAGFEGWCTVEQDCDPTL
                     DVSPIKDAGANREYLESIGFK"
BASE COUNT          305 a          512 c          524 g          262 t
ORIGIN      
        1 cacctggttc cggggcgaac ataccgagga tttcctggcc gaccccaagg ccccggccac
       61 ctggcggacc agcggcatgg ccaatggcac gatgggcgat cttgccccgc atatggtcaa
      121 cggcgccctg gcgctgatgg ggccgatcat ctcggtggcg ggcagctacg agaccgttca
      181 caagacgcgc cccggcggcg aggtcagcaa cgacgatcac gcccagatga tgtgccggtt
      241 cgagaacggc gcgatggggc agatgtattt ctcgcgcatc gcgaccggcc gcaagatggg
      301 tttcgcctat gaaatcagcg gcaccagggg cgcgatccgg ttcgaccagg aagaccagaa
      361 tgcgatctgg ctctaccgga tggagggccc cgaggcagag cgcggcttca ccaggatcct
      421 gaccggtccg gcgcatcccg actacgcgcc attctgccag gggccgggcc atggcaccgg
      481 ctaccaggac cagatcatca tcgaggccag ggatttcctg catgcgatcg agaccggtca
      541 gccgcattgg ccctgctttc gcgacgggca tgaggtcaat cgggtcatcg ccgcgatgcg
      601 cgcctcggcc gacgccggga cctggaccga catcaaagat ttctgatcac cggagaacgc
      661 aggcatgacc atcagaatcg gcaacgcgcc ctgctcgtgg ggggtggaat tcgcagagga
      721 tccccggaac ccggcatggc ggaccgttct cgcagaatgc gctgcggcgg gttacaaggg
      781 gatcgaactc ggccccgtgg gcttcatgcc agaggatccc gggatcctgt cggacgcatt
      841 ggaggaacac gggctcgagc tgatcggcgg cgtcgtcttc cgcccctatc atgaccccga
      901 agcctgtaag gacgtgcttg acgccaccca ccgcactgcg cgcgcgctca gggcccatgg
      961 ggcccagcat ctggtgctga tcgattccat ctcgccgcgc cgcgcgccca ccgccggccg
     1021 tgccggcgag gccgaacaga tggaccgcgc cgaatggatc gccttccgcg accgaatcgc
     1081 cgaaagcgcg cggatcgggg ccgaggaata cggcctgacg gtgggtattc atgcccatgc
     1141 cgcgggtttc ctggacttcg agccggaact ggaacgcctg ctggacgagg tcgatgagac
     1201 gatcctcggg atctgcttcg acaccgggca ccattcctat gccggcttcg accccgtggc
     1261 cttcatgaaa aagcatatcg gccgaatttc ctacatgcac ttcaaggata tcgacccgag
     1321 ggtaaaggcc gaggcgatcc ggaaccgcac cgggttctat gatgcctgcg gacagggcat
     1381 cttctgcaac ctcggtgagg gtgacgtgga ctttccggcc gttcgccagg tcctgctgga
     1441 cgccggcttc gagggctggt gcacggtcga gcaggactgc gatcccaccc tcgatgtctc
     1501 gccgatcaag gatgccgggg cgaaccgcga atatctcgaa tccatcggct tcaagtaagg
     1561 ggaacaggcc atgaccaagc tgaaatgggg catgatcggc ggc
//
LOCUS       DTVW01000460            6197 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1561370, whole
            genome shotgun sequence.
ACCESSION   DTVW01000460 DTVW01000000
VERSION     DTVW01000460.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 6197)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6197)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6197
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1561370"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1038
                     /gene="tcuB"
                     /locus_tag="EYO87_06130"
     CDS             <1..1038
                     /gene="tcuB"
                     /locus_tag="EYO87_06130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009572519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tricarballylate utilization 4Fe-4S protein TcuB"
                     /protein_id="HIC65564.1"
                     /translation="RRQIEICNACRYCEGYCSVFPAITRNKVFASGDITQLANLCHNC
                     RGCYHACQYTAPHEFDLNLPKALGAARVDSWERFAWPSGLARLLQSHAAGLVVAIVLG
                     IAAMILAIAALPGEGPGFYAWLGHGAMVAIFLPAFLLPLAAIAMGLRSYWHEVGGQAV
                     TLHDLREAAISAGTMRNLSGGQGQGCNFEKGERYSNARRHVHQAIMYGFLLCFAATSV
                     ATVMHYLLDMPAPYGLFSLPKLLGIPGGLLLVAGCFGMIVLRGKADPGLGAPGRSGGE
                     NAFIWTLGLAGLTGLVLYALRGTALTGPLLALHLGLVLAFFLVTPYSKMAHGFYRMAA
                     LVREAQLRRLR"
     gene            complement(1051..2109)
                     /locus_tag="EYO87_06135"
     CDS             complement(1051..2109)
                     /locus_tag="EYO87_06135"
                     /EC_number="5.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003593972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-oxalomesaconate tautomerase"
                     /protein_id="HIC65565.1"
                     /translation="MRDEDGIACLWMRGGTSKGAYFLKDDLPADPAGRDALLLSIMGS
                     PDPRQIDGIGGADPLTSKVAVLSRPSRADADVDYLFLQVFVDRALVSAAQGCGNILAG
                     VGPAAIERGLVRVAGAQTPVRIHMVNTGEIATAIVQTPDGRVSYAGDCSIDGVPGQHA
                     PILLMFDDVSGSMCGALLPSGQAVDVIDGIECTLIDNGMPCVILRADAVGRTGCEDRE
                     ALDADAELKTRLEAIRLQAGPMMNLGDVREKSVPKMTLVSAPQAGGAISTRSFIPHRC
                     HASIGVFAAVSVATACTLPGSPAASVARMPQGDGVAVEHPGGAAQLRLERDDQGRVTR
                     AGAMRTARKLFDGHVFPA"
     gene            complement(2196..2867)
                     /gene="ligK"
                     /locus_tag="EYO87_06140"
     CDS             complement(2196..2867)
                     /gene="ligK"
                     /locus_tag="EYO87_06140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003540564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-carboxy-4-hydroxy-2-oxoadipate
                     aldolase/oxaloacetate decarboxylase"
                     /protein_id="HIC65566.1"
                     /translation="MSVVVQNIVRADAEVIAGLSEVGVATVHEAQGRRGCLSSRMRPI
                     YPGARIAGSAVTISAPPGDNWMVHVAIEQLRDGDILVLAPTSPCEDGYFGDLLATSAM
                     ARGCRGLVIDAGVRDVRDLTEMRFPVWSRAISAQGTVKATPGSVNVPITCGNQAIEAG
                     DVIVADDDGVCVIRRAEALTVLAAARNRIEAEEAKRQRLAAGELGLDIDDMRGRLEAK
                     GLRYI"
     gene            complement(2939..3670)
                     /locus_tag="EYO87_06145"
     CDS             complement(2939..3670)
                     /locus_tag="EYO87_06145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018493053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PIG-L family deacetylase"
                     /protein_id="HIC65567.1"
                     /translation="MPEPGTALVFSAHAADFVWRCGGAIALHSRMGYQVTVACLSFGE
                     RGESARLWKDGKALDQIKAIRRAEAEAAAEVLGVHRLECFDLGDYPLHLDREDKFRLV
                     DLIREVQPRFMLSHSQHDPYNTDHMQTTQVVLECRMVAQAWGHDPGQKVLGAPQLYLF
                     EPHQTEQMGWKPDTFLDITPVWDQKRAAMEQMNGQAHLWEYYTRVAQQRANHFKRNSG
                     GQSGGRDCRYAEGFQSIFPRTVDEL"
     gene            3827..4711
                     /locus_tag="EYO87_06150"
     CDS             3827..4711
                     /locus_tag="EYO87_06150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019369228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HIC65568.1"
                     /translation="MSAEIAFIGFGEAGRAVAKGWRDEGFAGAIAAWDTKLDGAQAQP
                     LRDAATDLDVACGPAPVVLAGARHVLCLVTADQAVEAARQAAPHLAAASVWYDGNSCA
                     PDSKREAATMIGDAGATYVDMAIMAPIRPRLHRTPLLIAGPETALDFLDRMNMQYRWR
                     GPRIGSASAIKMIRSVMIKGMEALAAECLLSARRAGVLQDVLDSLQASDPATDWAAKA
                     AYNTERMMQHGLRRAAEMREVAKTVEGLGLPADLARATVAWQQRIGDLGLHEREGDLM
                     QRLAMIEEALCLSATSAT"
     gene            4684..5847
                     /locus_tag="EYO87_06155"
     CDS             4684..5847
                     /locus_tag="EYO87_06155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018302568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HIC65569.1"
                     /translation="MPVGNLRHLRVFLAVAEGGSVTRAATAGLVSQPAVTQAIAKLES
                     QAGTALFRRTRQGLFPTEAGRLFQHRAARALARLDMAMSDIAPRLRTTATRAQLNALI
                     AAVETQNFTLAAYRLGIAQPTLNRAITAIEAAAGRALFQRSAVGVAPSRPASALALAA
                     RLAFAELDQAVAELAELEGREVGRIVIGALPLSRAHVLPRALARFRQDRPRQPIRIMD
                     GIYGDLLAGLRRGEIDLIIGALRQPLPVGDVVQERLFDDVLAILAGPDDPLIHNPAPL
                     SALRCRPWLVARRGTPTRDLFEALFRDSNLDPPASIIETGSVILMREMVGDGRHLACV
                     SKAQAAREIERGIVAELPFPGQPVPRPIGLTLRSGWQPTRAQQALLDAIRAAI"
     gene            5997..>6197
                     /locus_tag="EYO87_06160"
     CDS             5997..>6197
                     /locus_tag="EYO87_06160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018066185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HIC65570.1"
                     /translation="MAGSAVLAFAAAAPVAAQGTVEVAIVGDPDTFDPMMSTKDVVSI
                     VTQHFMETLYTFDDNWAVVPLLA"
BASE COUNT          946 a         2119 c         2075 g         1057 t
ORIGIN      
        1 cggcgccaga tcgagatctg caatgcctgc cgctattgcg agggctattg ttcggtcttt
       61 ccggcaatca cccgcaacaa ggtctttgcc agcggcgaca tcacccaact ggccaatctg
      121 tgccacaatt gcaggggatg ctaccatgcc tgccaatata ccgcgccgca cgaattcgac
      181 ctgaacctgc caaaggctct cggcgccgcg cgggtcgaca gctgggaacg ctttgcctgg
      241 ccctcggggc tggcccgcct gctgcaaagc cacgcggccg ggctggtcgt ggccatcgtg
      301 ctgggcatcg ctgcgatgat ccttgccatc gccgccctgc cgggcgaagg cccgggcttc
      361 tatgcctggc tgggccacgg cgcgatggtg gcgatcttcc tgccggcctt cctgttgccg
      421 ctggcggcca tcgcgatggg attgcggtcc tattggcacg aggtcggcgg gcaggccgtc
      481 acgctgcatg atctgcgcga ggccgcgatc tcggccggga cgatgcggaa cctgtcgggc
      541 gggcagggtc agggatgcaa cttcgaaaag ggcgaacgct acagcaatgc ccggcgtcat
      601 gtgcaccagg cgatcatgta cgggttcctg ctgtgcttcg ccgcgaccag tgtggccacg
      661 gtgatgcact acctgctgga catgccggcg ccctacggcc tgttctcact gcccaagctg
      721 ctgggcattc ccggcggcct gctgctggtg gcgggctgct tcggcatgat cgtcctgcgc
      781 ggcaaggccg atcccggact gggtgcgccg ggccggtcgg ggggcgagaa tgccttcatc
      841 tggacgctgg gtctggcggg gttgaccgga cttgtcctct acgcgctgcg gggcacggcg
      901 ctgaccggcc cgttgctggc gctgcatctg gggctggtgc tggccttctt cctggtcacg
      961 ccctattcca agatggcgca tggcttctac cggatggcgg cgctggtgcg cgaggcgcag
     1021 ctccgcagac ttcgctgaga ccgggctcgc tcaggcggga aagacatgcc cgtcgaacag
     1081 cttgcgcgcg gtgcgcatcg cgccggcgcg ggttacgcgg ccctgatcgt cgcgctccag
     1141 ccgcagttgg gccgcgccac ccggatgttc gacggcgact ccatcgccct gcggcatccg
     1201 cgcgacggat gcggcgggcg atccgggcaa ggtgcaggcc gtcgccacgc tgacggccgc
     1261 gaacaccccg atcgaggcat ggcagcgatg cggaatgaaa ctgcgggtcg agatggcgcc
     1321 gcctgcctgc ggggccgaaa ccagcgtcat cttgggcacc gatttctcgc gcacatcgcc
     1381 caggttcatc atcggccccg cctgcagccg gatcgcctcc agccgcgtct tcaattcggc
     1441 atcggcatcc agcgcctcgc gatcctcgca tccggtccgg ccgaccgcat cggcgcgcag
     1501 gatcacgcag ggcatgccgt tgtcgatcag cgtgcattcg atcccgtcga tcacatcgac
     1561 cgcctggccg ctgggcagca gggcaccgca catggacccc gacacgtcgt cgaacatcag
     1621 caggatcggg gcgtgctgcc ccggcacacc gtcgatgctg caatcgcccg catagctgac
     1681 cctgccatcg ggggtctgaa cgatggccgt cgcaatctcg ccggtattga ccatgtggat
     1741 gcgaaccggt gtctgcgcgc ctgcgacgcg gaccaggcct cgttcgatcg cggccgggcc
     1801 gaccccggcc aggatattgc cgcaaccctg cgcggcgctg accagggccc ggtcgacgaa
     1861 gacctgaagg aacaggtaat ccacatccgc atccgcacgg ctgggccgcg acaggaccgc
     1921 gaccttcgag gtcagcgggt ccgcgccccc gatcccgtcg atctgtcgcg gatcggggct
     1981 gcccatgatc gacagcagca aggcgtcgcg gccggccgga tcggcgggca ggtcgtcctt
     2041 caggaaatac gcccccttcg atgtgccgcc gcgcatccac aggcaggcaa tcccgtcctc
     2101 gtcgcgcatc ctttcagccc ttcttcgttg tccaaatacc ctttcttggc taggcggccg
     2161 cgctcggccc gccgaggccg gaccgccccc gcccctcaga tgtagcgcag ccccttcgcc
     2221 tccagcctgc cgcgcatgtc atcgatgtcg aggccaagct cgccggcggc aagtcgctgc
     2281 cgcttggcct cctcggcctc gatccgattg cgggcggcgg ccagcacggt cagtgcttcg
     2341 gcgcggcgga tgacgcagac gccgtcgtca tcggccacga tcacatcgcc cgcctcgatc
     2401 gcctgattgc cgcaggtgat gggcacgttc accgatcccg gcgttgcctt cacggtgccc
     2461 tgcgcgctga tggcccgcga ccagaccggg aatcgcatct ccgtcaggtc gcggacatcg
     2521 cggacgccgg cgtcgatcac cagcccccgg cagccccgcg ccatcgcgct ggtcgccagc
     2581 agatcgccga aatagccgtc ctcgcagggc gaggtggggg caagaaccag gatgtcgccg
     2641 tcgcgcaact gctcgatggc gacatggacc atccagttgt cgccgggcgg cgcgctgatg
     2701 gtgacggcac tgccggcgat gcgggcgccg ggatagatcg gccgcatccg gctggacaga
     2761 cagccacgac ggccctgggc ctcgtgaacg gtcgcgacgc cgacctcgga cagaccggcg
     2821 atgacttccg cgtcggcgcg gacgatgttc tggacgacaa cagacatgaa tcagcctttc
     2881 cagggtttcc gcagcatggc ttcgatcgcc accctgccga tgatcggggc ctcaggcatc
     2941 acaattcgtc cacggttcgg ggaaagatcg actggaatcc ttcggcatat cggcaatcgc
     3001 gcccgcccga ctgaccgccg gaattgcgct tgaaatggtt ggcgcgctgc tgcgccacgc
     3061 gggtgtaata ttcccacaga tgggcctgtc cgttcatctg ttccatcgcg gcccgcttct
     3121 ggtcccagac cggggtgatg tcgaggaagg tgtcgggttt ccagcccatc tgttcggtct
     3181 ggtgcggctc gaacaggtaa agctgcggtg cgcccagcac cttctggccg ggatcgtgac
     3241 cccaggcctg cgcgaccatg cgacattcca gcaccacctg ggtcgtctgc atgtggtcgg
     3301 tgttgtaggg atcatgctgg ctgtggctca gcatgaagcg cggctgcacc tcgcgaatca
     3361 ggtcgaccag ccggaacttg tcctcgcggt ccagatgcag cgggtaatcg cccagatcga
     3421 aacattccag ccggtgcacg cccagcacct cggccgccgc ctcggcctcg gcccggcgga
     3481 ttgccttgat ctggtccagc gccttgccgt ccttccacag ccgcgcgctt tcgccgcgtt
     3541 cgccaaagga caggcaggcc accgtcacct gataccccat ccgggaatgc agcgcgatgg
     3601 cgccgccgca gcgccagacg aaatccgcgg catgggcgct gaagaccagc gcggttccgg
     3661 gctccggcat tccattctcc ctgagttgtg ctgccgacca gatcgcatcc cggccccacc
     3721 gcaggcaatt cagaaatcca cgccaatgca taagttccgg ctatgacggg ttggcgggcg
     3781 cggcccggcg gggcaatatt ccgctaggtt tcgaaaggaa atcgacatga gcgcagaaat
     3841 cgccttcatc ggcttcggag aggccggccg cgcggtcgcg aagggctggc gtgacgaggg
     3901 ctttgccggt gccatcgcgg cctgggacac caagctggat ggcgcccagg cgcagcccct
     3961 tcgcgatgcc gccacggatc tggatgtcgc ctgcgggccg gcccctgtcg tgctggcggg
     4021 cgcgcggcat gtcctgtgcc tcgtcaccgc tgatcaggcg gtcgaggccg cccggcaggc
     4081 ggcgccgcat ctggcggcgg caagcgtctg gtatgacgga aattcctgcg cccccgacag
     4141 caagcgcgag gcggcgacga tgatcggcga tgccggcgca acctatgtcg atatggcgat
     4201 catggcgccg atccgacccc ggttgcaccg cacgccgctg ttgatcgcgg gccccgaaac
     4261 ggcgctggac ttcctggatc gcatgaacat gcagtatcgc tggcgcggcc cccgcatcgg
     4321 ttcggcctcg gcgatcaaga tgatccgctc ggtgatgatc aaggggatgg aggcgctggc
     4381 cgcggaatgc cttctgtcgg caagacgggc gggcgttctg caggatgtgc tggattcgct
     4441 gcaagcctcc gatccggcca cggactgggc ggcgaaggcc gcctacaata ccgaacggat
     4501 gatgcagcac gggctgcgcc gcgccgccga gatgcgcgag gtcgccaaga ccgtcgaagg
     4561 gcttggattg cccgcggatc tcgcccgcgc cacggtcgca tggcagcaaa ggatcggcga
     4621 tctgggcctg cacgagcgcg agggcgacct gatgcagcgc ctggcgatga tcgaagaggc
     4681 gctatgcctg tcggcaacct ccgccacctg agggtcttcc tggcggtcgc agagggcggc
     4741 tcggtcacgc gggccgccac ggcggggctg gtgtcgcaac cggccgtgac gcaggccatc
     4801 gccaagcttg aatcgcaggc cggcacggcc ctgttccggc gcacccggca gggcctgttc
     4861 ccgaccgagg cggggcgcct tttccagcat cgcgcggccc gcgcgctggc acgtctggac
     4921 atggcgatgt ccgacatcgc gccgcggctt cggacgaccg cgacgcgggc gcagctgaac
     4981 gcgctgatcg ccgccgtcga gacgcagaat ttcacgctgg cggcctaccg gctggggatc
     5041 gcgcagccca ccctgaaccg ggcgatcacc gcgatcgagg ctgctgcggg gcgggcgctg
     5101 ttccagcgca gcgcggtcgg cgtggcgccc tcgcggccgg catcggcgct ggcgctggcg
     5161 gcgcgactgg cctttgcgga gctggatcag gccgtggccg agcttgcgga actggaaggc
     5221 cgcgaggtgg gtcggatcgt catcggcgcg ctgcccctgt cgcgcgccca tgtcctgccg
     5281 cgcgcgctgg cccggtttcg ccaggaccgc ccccggcagc cgatccgcat catggacggg
     5341 atctatggcg atcttctggc ggggcttcgc cggggcgaga tcgacctgat catcggcgcg
     5401 ctgcgtcagc cgcttccggt cggggatgtg gtgcaggaac gcttgttcga tgacgtgctg
     5461 gctatccttg ccgggccgga tgatccgctg atccacaatc ccgcgccgct gtcggccctg
     5521 cgatgtcggc cctggcttgt cgcacggcgc ggcacgccga cccgcgatct gttcgaggcg
     5581 ctgtttcgcg actcgaatct cgatccgccg gccagcatca tcgagaccgg atcggtcatc
     5641 ctgatgcgcg agatggtcgg cgacggccgc catctggcct gcgtgtcgaa agcccaggcc
     5701 gcgcgcgaga tcgagcgcgg tatcgtggcg gaacttccat ttcccggcca gccggtgccg
     5761 cgccccatcg gcctgaccct gcgcagcgga tggcagccga cacgggcgca gcaggccctt
     5821 ctggatgcaa tccgcgcggc gatctgatgc ccgcgtcgcg ccgcccggac ccctactgtc
     5881 cacaataatg aatgattgtt gacttctatg tagagtgatt ctctactcat ttctgcggac
     5941 tatataacac aataatggaa atcagggagc ttcacatgac atttcgtgcc gtctgcctgg
     6001 ccggctcggc cgtgcttgcc ttcgcggccg cggcgccggt cgccgcgcag ggaaccgtcg
     6061 aggtcgccat cgtcggcgat ccggacacgt tcgacccgat gatgtccacc aaggatgtcg
     6121 tcagcatcgt gacgcagcat ttcatggaaa cgctgtacac cttcgatgac aactgggccg
     6181 tggtgccgct gctggcc
//
LOCUS       DTVW01000461            2517 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1561599, whole
            genome shotgun sequence.
ACCESSION   DTVW01000461 DTVW01000000
VERSION     DTVW01000461.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2517)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2517)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2517
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1561599"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            200..1291
                     /locus_tag="EYO87_06165"
     CDS             200..1291
                     /locus_tag="EYO87_06165"
                     /inference="COORDINATES: protein motif:HMM:PF01501.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65571.1"
                     /translation="MSRHAFFLTVDCGYLPLARGLGQRLAGQWDCDVHVFLEDPRADE
                     ANGGSRGRVCVHVNKVAGLRPEGLPVTRNWPAIVYDRIFAPRFLTGYDRLTYLDADIF
                     PLTAAPEALAVPLRHGLGAVQDTASVGFSPHGAGLTRDAWRASIGLRSERYFNSGMLM
                     IDPVLWNQIDFAGALDRFVAAHGQAVRMPDQDFLNWQFQDRWTEFSPRFNFQKGLFNY
                     GYEAWFPPAFLHFSSFQKPWLGPDCADSVQGQFHEPFLEMVRRAGCDADLLTRRIRAS
                     WPRRLRKAVRKALSSAGLPVGKERRLRAEWHKRAHPLYDGFVEDLRTGRYADMPLTGF
                     QATEMPRPTLTFDGQYLRRRLTLEAESLT"
     gene            1288..2082
                     /locus_tag="EYO87_06170"
     CDS             1288..2082
                     /locus_tag="EYO87_06170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010392840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65572.1"
                     /translation="MTDPLLILTMKWGTLYSSADVNRLAAQVRRHLDRPHRVICFTDD
                     ASGLDPRIEALPLPELGLPEGHGDMRWRKLALFRRDLGDGQGQILSGTALFLDIDLVV
                     VDDLAPFFDLPGDFFIIRDDDLFRSKPLRKINPPRERFLRSVGNSSVFRYRVGQHGYV
                     LDAYLSDPAGATRNYEISQQFQSAQLALHGHLDYWPKGWCVSFKNDCVPRKLSSYLRD
                     PSLPEGAKIVLFAGSPKMKDIFAGRGHKWYRRIGDIGWLRKAWENP"
     gene            2133..>2517
                     /locus_tag="EYO87_06175"
     CDS             2133..>2517
                     /locus_tag="EYO87_06175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HIC65573.1"
                     /translation="MAEIATRPNIPGRPHCLPAPLIVSLTSHAARFGTLAPTLRSLLY
                     QTVQPDRVILWLDDGDQHRLPPEVQAMARLDVRICPDWRSYKKIVPTLLAHSQAFIAT
                     ADDDLYYPANWLRCGTLTAPVPSPKA"
BASE COUNT          429 a          763 c          801 g          524 t
ORIGIN      
        1 caaggaaggt caggaagtga aggtgaaact tctgggcttc gacgatcgcg gcaaggtgcg
       61 ccttggcatg aagatggtcg atcaggaaac cggtgccgag atcgacgaga aacagcagga
      121 atcggccgag taaccggcac ggacgattct tctgcggggc cgcctgaggg tggccccttt
      181 tctataggga tagaatctca tgagccgtca tgcgttcttt ctgaccgtcg actgcggcta
      241 tctgccattg gctcgtggtc tggggcagag actggccggg cagtgggact gcgacgttca
      301 cgtcttcctt gaggatcccc gtgccgatga agcgaatggc ggaagtcgcg gcagggtctg
      361 cgtccatgtg aacaaggtag cagggctgcg ccccgagggc cttccggtca cccgaaactg
      421 gccggccatc gtttacgacc gcatttttgc accgcgtttt ctgactggat atgaccggct
      481 gacctatctg gatgccgaca tcttcccctt gaccgccgcc ccggaggcgc ttgcggtccc
      541 cctgcgccat gggttgggtg ccgttcagga caccgcctcg gttggctttt cgccgcatgg
      601 cgcgggactg acgcgcgatg cctggcgcgc gtcgatcggc cttcggtccg agcgctattt
      661 caactcgggc atgttgatga tcgaccccgt cctctggaac cagatcgatt tcgcaggggc
      721 gctggaccgc tttgtcgcgg cgcatgggca ggccgtgcgc atgccggacc aggatttcct
      781 caactggcag ttccaggatc gctggacgga gttcagcccg cggttcaatt tccagaaggg
      841 gctgttcaat tacgggtatg aggcatggtt tccgccggct ttcctgcatt tctccagttt
      901 ccagaagcct tggctgggac cggattgtgc ggattcggtg caaggccagt tccacgagcc
      961 atttcttgag atggtgcgcc gggcagggtg tgatgccgac cttctgaccc gccgcatccg
     1021 ggcgtcatgg ccgcgccggc tgagaaaagc cgtccgcaag gccctgtcat ccgcgggtct
     1081 gccggtcggc aaggagcgtc gcctgcgtgc tgaatggcat aagcgcgccc atccgctgta
     1141 tgacggcttt gtcgaggatt tgcgaacggg gcggtatgcg gatatgcctt taactggctt
     1201 tcaggcaacc gagatgcccc gaccaaccct caccttcgac gggcaatatc tgcgtcgtcg
     1261 cctgaccttg gaggctgaga gcctgacgtg acagaccccc tgctgatcct gacgatgaaa
     1321 tggggcacgc tctattccag cgccgacgtg aaccggctgg cggcgcaggt ccggcggcat
     1381 ctggaccggc cgcatcgcgt catctgcttt accgacgatg cctcggggct ggacccgcgg
     1441 atcgaggcgc tgcccttgcc cgagttgggc ctgcccgagg ggcatggcga catgcgctgg
     1501 cgcaagctgg cgctgttccg gcgcgatctg ggcgatgggc agggacaaat cctgtcaggg
     1561 accgcgctgt ttttggacat cgacctggtg gtcgtggacg atcttgcccc gtttttcgac
     1621 ctgccggggg atttcttcat catccgtgac gacgatttgt tccgctccaa gccgttgcgc
     1681 aagatcaatc cgccccgaga gcggttcctg cgcagcgtcg gcaattccag cgtgttccgc
     1741 tatcgcgtag ggcagcacgg ctacgtgctg gacgcctatc tgtccgatcc ggcgggcgcg
     1801 acgcggaact atgagataag ccaacagttc cagtctgcgc aactggccct gcacgggcat
     1861 ctggactatt ggcccaaagg ctggtgcgtc agcttcaaga acgattgcgt accacgcaag
     1921 ctgtccagct acctacgcga tccatcgctg ccagaggggg ccaagattgt cctgtttgcg
     1981 ggatcaccca aaatgaagga tatctttgcc ggtcgcggcc acaagtggta ccggcgcatc
     2041 ggcgatatcg gctggctgcg caaggcttgg gaaaaccctt gatcagcgag tcacttcgcc
     2101 ggttcaagca tcgtcgccgc caggctcggg ccttggccga gattgccacg cggccgaaca
     2161 tccccggtcg tccacactgc ttgcccgccc cgctgatcgt gtcgctgacc agccacgcgg
     2221 cgcgattcgg gacgctggcg ccgacgttgc gttctctttt atatcagacg gttcaacccg
     2281 accgtgttat cctgtggttg gacgatggcg accagcatcg cctgccgccc gaggtgcagg
     2341 caatggcgag gctggatgtg cgcatctgtc cggactggcg gtcctataag aagatcgtgc
     2401 cgacattgct ggctcattcg caagccttca tcgccactgc cgacgatgat ctgtattatc
     2461 ctgcgaactg gctgcgatgc ggcaccttga cggcgccggt gccatcgccc aaggcaa
//
LOCUS       DTVW01000462            1680 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1562401, whole
            genome shotgun sequence.
ACCESSION   DTVW01000462 DTVW01000000
VERSION     DTVW01000462.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1680)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1680)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1680
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1562401"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(145..1377)
                     /locus_tag="EYO87_06180"
     CDS             complement(145..1377)
                     /locus_tag="EYO87_06180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008553409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03862 family flavoprotein"
                     /protein_id="HIC65574.1"
                     /translation="MSETVEALVIGAGPAGLMAAEMLAGAGHAVVIAEAMPTPARKFL
                     MAGKSGLNLTRDEPLPAFLRHFGGATGAPPRTPGYFDQGKAVLGPPEVMDWARGLGIA
                     VFTGSTGRVFPVGMKASPLLRAWLARLDARGVRLRTRWRWTDLENGFLFETPEGPRQV
                     SADVAVLALGGASWPRLGSDAAWVPLLRDAGVRIAPFRPANMGFRVDWSPAMNRHLGA
                     AVKGVALRAGEMVSRGEWVIGRQGIEGGGIYEIAAVIRDGAGVRLDLAPDLGPDALVR
                     RFARPRAKLSLGNWLRRILGDPIKVALMLEWGRPFPGDARGWAMLAKSVPMPLGGPMP
                     IEGAISSAGGVTEAAITPDLELRALPNVFVAGEMLDWEAPTGGYLLSGCLLTGRMAGM
                     AASTRLIEAGAPLRKRQP"
     gene            complement(1374..>1680)
                     /locus_tag="EYO87_06185"
     CDS             complement(1374..>1680)
                     /locus_tag="EYO87_06185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011453535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DNA polymerase III subunit delta"
                     /protein_id="HIC65575.1"
                     /translation="GQGVTPVSLAIAALRHFRALHLAAADPQGPGAGLSRMRPPVFGP
                     RRDRMARQAQSWGLGPLEEAVHALLDTDLILRSSSRAPQMPLVERALIRLAMQAGRR"
BASE COUNT          275 a          676 c          518 g          211 t
ORIGIN      
        1 cggacacgtc tgcgacctct tcccagacga agagtgctac aactccttca aggccgccgg
       61 gcatgaggcc aattgagtgc gacacgctct agcggtgcat ccccgctctg cgcgactccc
      121 gcccgcccct gaccgcggca tggctcaggg ttgccgtttc cggagcggcg cgccagcctc
      181 gatcaaccgc gtcgaggcag ccattcccgc catccgcccc gtcagcagac acccgctgag
      241 aagatagccg ccggtcgggg cttcccagtc cagcatctcg cccgcgacga agacattcgg
      301 cagggcgcgc aattccagat cgggggtgat cgccgcctcg gtgacccccc cggccgagga
      361 aatcgcgcct tcgatcggca tcggcccgcc cagcggcatc gggacggact tggcaagcat
      421 cgcccatccc cgcgcatcgc ctggaaaggg tcgcccccat tccagcatca gcgccacctt
      481 gatcggatcg cccaggattc gccgcagcca attgcccagc gacagcttcg cccggggccg
      541 cgcgaaccgc cggaccagcg catccggccc cagatccggc gcaagatcca gacgcacccc
      601 ggccccgtcc cggatcacgg cggcaatctc gtagatgccg ccaccctcga taccttggcg
      661 cccgatcacc cactcgcccc ggctgaccat ctcgcccgcg cgcagggcca cgcccttcac
      721 ggccgccccg agatggcgat tcatggcggg cgaccaatcg acacgaaatc ccatattcgc
      781 gggacggaac ggcgcgatcc gcacccccgc atcgcgcagc agcggcaccc aggccgcgtc
      841 cgatcccagc cgcggccagc ttgccccgcc aagcgccagc accgcaacat cggcgctgac
      901 ctgccgcggc ccctcgggcg tctcgaagag aaatccgttc tcaaggtcgg tccaccgcca
      961 gcgggtccgc aaccggaccc cgcgcgcatc cagccgcgcc agccatgccc gcaacagggg
     1021 cgaggccttc atcccgaccg gaaagacccg gccggtggaa ccggtgaaaa cggcgatccc
     1081 cagcccgcgc gcccagtcca tcacctcggg cgggcctaac acggctttgc cttggtcgaa
     1141 atatcccggg gtccggggcg gcgccccggt cgcgccgccg aagtgacgca ggaacgccgg
     1201 caaaggctcg tccctggtca ggttcagccc ggacttgccg gccatcagga atttccgcgc
     1261 cggtgtcggc atcgcctcgg cgatcacgac cgcatgtccc gcccccgcca gcatctcggc
     1321 cgccatcagg ccggccgggc cggcaccgat caccagcgcc tcgacggttt cgctcaccgc
     1381 cgccccgcct gcatcgccag ccggatcagc gcacgctcga ccagcggcat ctgcggcgcg
     1441 cggctggaac tgcgcaggat caggtcagtg tccagaagcg cgtgcaccgc ctcttccagc
     1501 ggacccaggc cccagctttg cgcctgccgg gccattctgt cgcggcgggg accgaagacc
     1561 ggcgggcgca tccgcgacag gcccgcgccc ggcccctgcg gatcggcggc ggccaggtgc
     1621 agcgccctga aatggcgcag ggcggcgatg gccagcgaga cgggcgtgac gccctgcccc
//
LOCUS       DTVW01000463            2002 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1564157, whole
            genome shotgun sequence.
ACCESSION   DTVW01000463 DTVW01000000
VERSION     DTVW01000463.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2002)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2002)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2002
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1564157"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..533)
                     /locus_tag="EYO87_06190"
     CDS             complement(<1..533)
                     /locus_tag="EYO87_06190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65576.1"
                     /translation="MATIPHEKDFDADPIGSRDAALAAEFAGAFGDAAAAAQVVALNE
                     TFDSAAGFSTSAPFFSDGLGDYFGIAGTVADFGTDPTPSALKTYAGADGSHLTGMDLD
                     GEGAVLPITAEWSGIDISGLSDLTFQGRFAEFFDTPGDIDAGDLLMVQARIDGGAWQT
                     LLAFVGSDFTSGSFNGN"
     gene            879..1133
                     /locus_tag="EYO87_06195"
     CDS             879..1133
                     /locus_tag="EYO87_06195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65577.1"
                     /translation="MKKFFVALIAATLATGAAQAANIGQNERPGSAASPAQAVQTAEV
                     KADEVLSSRELSHRGIPDDTILTVTSFPTSDAAPVGNSDR"
     gene            1170..>2002
                     /locus_tag="EYO87_06200"
     CDS             1170..>2002
                     /locus_tag="EYO87_06200"
                     /inference="COORDINATES: protein motif:HMM:PF00126.25"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HIC65578.1"
                     /translation="MQGRLSTCLPRPCGNRGQNKIMDIAILRTFVAIIDEGSFAAAAR
                     RMSISKSLCSKHVSDLEADLGARLLHRTTRSVTPTAAGQCYANRVRDVLARLHEASEA
                     VRALSDHPVGPLKIGSPIVYTLNVLRPHLLRFIESNPHVQLEVMLDDGRSDIIAGGFD
                     AVIRIGHLPDSALTARKLHEARIVMVASPGYVAEHGAPEVPADLTRHRCLHYSNLPGS
                     GTWPLQQGKVLIHQRVRIAFASNNSELLRMMAIEGRGIALLPLFALGDELETGALVPL
                     MP"
BASE COUNT          358 a          678 c          635 g          331 t
ORIGIN      
        1 aaattgccgt tgaagctgcc cgaggtgaag tccgagccga cgaaagccag caaagtctgc
       61 cacgcgccgc cgtcgatgcg cgcctgcacc atcagcagat cgcccgcgtc gatatcgccc
      121 ggagtgtcga agaactccgc gaatctgccc tggaaggtca gatccgacag gccggaaatg
      181 tcgatgccgg accattccgc ggtgatcggc agcacagccc cttcgccgtc cagatccatc
      241 ccggtcaggt ggctgccatc ggccccggca taggtcttca gcgccgaagg cgtcgggtcc
      301 gtgccgaaat cggcgacggt tccggcaatg ccgaagtaat cgcccaagcc atccgaaaag
      361 aacggcgccg aggtggaaaa gcccgcggcg ctgtcaaagg tctcgttcag cgcgaccacc
      421 tgggccgcgg cggccgcgtc gccgaaagca ccggcgaatt ccgccgccag cgccgcgtcg
      481 cggctgccga tagggtcggc gtcgaaatct ttttcgtgag gtatggtggc catgcgtctt
      541 ttccctgtca gcccatcggt tgcccgcgca ggccgaacgc tagcagttct gtgcaaccgt
      601 ctcgtgacgc ggcaggccgg cagcccgatc tccgcggccg gtccggccat gcgcgagaga
      661 ccgagcttat ggctcgccgt gcggatggca acatctttcg catcccaacc agcggttgtc
      721 cgcgcccccg ccccggggcg ccatcggccc gccgcgggat tgtgcaggaa tgtcgaacac
      781 agagcgcgac cgatcgggcc taattccgcg gacgggggag gcctatctga tctggcagag
      841 gacgcggaag atgccgcgcc aatcgaaagg acatgaccat gaaaaaattc tttgttgcat
      901 tgatcgccgc caccctggca accggcgccg cacaggccgc caatatcggt cagaacgaac
      961 gtccgggctc ggccgccagc cccgcccagg ccgtccagac cgccgaggtc aaggccgacg
     1021 aggtgctgtc gtcgcgcgaa ctcagccatc gcgggattcc cgacgacacg atcctgaccg
     1081 tcaccagctt ccccacttcg gacgcagcgc cggtcggcaa cagcgaccgc tgatcgccgt
     1141 ttcagacgga tccagggccg cccttgccga tgcaggggcg gctttctaca tgtctgcctc
     1201 gaccatgtgg caatcggggg cagaacaaga tcatggacat cgccatcctg cgcacattcg
     1261 tcgcgatcat cgacgagggc agctttgccg ccgcggcgcg gcggatgtcg atctccaaaa
     1321 gcctgtgcag caagcatgtc tctgatctgg aggcggatct gggcgcgcgg ctgctgcacc
     1381 ggaccacgcg atcggtgacg ccgaccgccg ccggtcagtg ctatgccaac cgcgtccgcg
     1441 acgttctggc ccggctccac gaggccagcg aggccgtgcg cgccctgtcg gatcatcccg
     1501 tcggtccgct gaagatcggc tctcccatcg tgtatacgct gaacgtgttg cggccgcatc
     1561 tgctgcgctt catcgagagc aatccccatg tgcaactgga ggtgatgctg gacgacggcc
     1621 ggtccgacat catcgcgggc ggattcgatg cggtcatccg gatcggccat cttccggatt
     1681 ccgccctgac cgcgcgcaag cttcacgagg ccaggatcgt gatggtcgcg tcgccaggct
     1741 atgtcgccga acatggcgcg cccgaggttc cggcagatct gacccggcac cgctgcttgc
     1801 actactcgaa cctgcccggc agcggcacct ggccgctgca acagggcaag gtcctgatcc
     1861 accagcgggt ccggatcgcc tttgcttcca acaacagcga attgctgcga atgatggcga
     1921 tcgaggggcg gggaatcgcg ttgctgccgc tgttcgcact tggcgacgaa ctggaaaccg
     1981 gggcgctggt gccgctgatg cc
//
LOCUS       DTVW01000464            1849 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1566401, whole
            genome shotgun sequence.
ACCESSION   DTVW01000464 DTVW01000000
VERSION     DTVW01000464.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1849)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1849)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1849
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1566401"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..469)
                     /locus_tag="EYO87_06205"
     CDS             complement(<1..469)
                     /locus_tag="EYO87_06205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011746911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase"
                     /protein_id="HIC65579.1"
                     /translation="MSKTDPGRFFEDYRVGQVIRHAAPRTLAEGERALYHALYPSRHA
                     LYSSDDFAAGCGLEGSPLNDLIGFHVIFGKTVPDISVNAVANLGYAQGRWLNPVMPGD
                     TLRAESEVIGLRQTSNGTSGVVWVRTRGLNQMGEPVLDYVRWVMVRKRAPDAPA"
     gene            complement(466..672)
                     /locus_tag="EYO87_06210"
     CDS             complement(466..672)
                     /locus_tag="EYO87_06210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011746910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1737 domain-containing protein"
                     /protein_id="HIC65580.1"
                     /translation="MTTLYRCITDDDTSRFCHRVSEALSKGWTLHGGPSMAFDPQKGE
                     MRMAQAVTKDIHAEYHSEMKLGQQ"
     gene            complement(674..1219)
                     /locus_tag="EYO87_06215"
     CDS             complement(674..1219)
                     /locus_tag="EYO87_06215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65581.1"
                     /translation="MLILILGVALWWAAHLWKRVAPAQRAAVGDKGKGMVAAALIVSV
                     LLMIWGYKAADGPVWWGPSAALVGINNLLVLIAFYLFAASGMKTRVTAMTRHPQLIGF
                     SLWAVAHLLVNGDLPSLVLFGGLLVWALVEMALINRSPWTPPAGPFPARKEAMAAIGA
                     VVVLLVVGLIHGLIGPWPFGG"
     gene            complement(1262..>1849)
                     /locus_tag="EYO87_06220"
     CDS             complement(1262..>1849)
                     /locus_tag="EYO87_06220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011746908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA ester lyase"
                     /protein_id="HIC65582.1"
                     /translation="CADAVLITKVDTAADLDAVAALCPDLALWAMMETPLAMLNAAEI
                     AAHPRLQGMVMGTNDLAKELNSRFRPDRLPMQTGLGLCLLAAKAFRKVIVDGVFNAFR
                     DDAGLRAECEQGRDMGFDGKTLIHPAQLAVANQAFAPTEAEIALARRQIEAFRQAGAD
                     GRGVAVVDGRIVENLHVETARSTLDRAEAIAAMAG"
BASE COUNT          325 a          645 c          584 g          295 t
ORIGIN      
        1 gcgccggcgc gtcgggcgcc cgtttgcgca ccatcaccca gcggacgtaa tccagcaccg
       61 gttcgcccat ctggttcagt ccgcgcgtgc gcacccagac cacgcccgat gtcccgttcg
      121 aggtctgcct gaggccgatc acctcggatt cggcgcgcag cgtgtcgccc ggcatgaccg
      181 ggttgagcca gcggccctgg gcatagccca gattggcgac ggcattgacg ctgatatcgg
      241 ggaccgtctt gccgaagatg acatgaaagc cgatcagatc attcagcgga ctgccttcga
      301 ggccgcaacc ggcggcaaaa tcgtcgctgg aatacaacgc atgccgcgac ggatagagcg
      361 cgtgataaag ggcccgttcg ccctcggcca gggtgcgcgg cgcggcgtgg cggatcacct
      421 gaccgacccg gtaatcctcg aagaagcggc ccggatcggt cttgctcatt gctgtcccag
      481 cttcatctcg gaatggtatt cggcgtggat gtccttggtc accgcctgcg ccatccgcat
      541 ctcccccttc tgcggatcga aggccatcga ggggccgcca tgcagggtcc agcccttcga
      601 cagcgcctcg ctgacgcggt ggcagaagcg agaggtgtca tcatcggtaa tgcagcggta
      661 aagcgtcgtc atctcagcct ccgaagggcc atgggccaat cagaccgtgg atcagaccga
      721 cgaccagcag cacgacgacg gcgccgatgg cggccatcgc ctccttgcgg gccgggaacg
      781 ggccggcggg cggggtccag gggctgcggt tgatcagcgc catctcgacc agcgcccaga
      841 ccagcagacc gccaaacagc acgaggctgg gcagatcacc attgaccagc agatgcgcca
      901 ccgcccacag cgaaaagccg atcagttgcg gatggcgggt catcgccgtc acccgcgtct
      961 tcatgccgct ggccgcgaac aggtagaagg cgatcagcac cagcaggttg ttgattccga
     1021 ccagcgccgc cgaggggccc caccagaccg ggccgtcggc ggccttgtat ccccagatca
     1081 tcagcagcac cgaaacgatc agggcagcgg cgaccatccc cttgcccttg tctcccaccg
     1141 cggccctctg ggcgggcgcc acgcgtttcc acagatgcgc agcccaccac agggccacgc
     1201 caaggatcag gatcagcatc tggcttcctt tcgtataggc tggatcggcc tcacgttgac
     1261 gctaaccggc catggctgca atagcctcgg cgcgatccag ggtgctgcgg gcggtttcga
     1321 catgcaggtt ctcgacgatc cggccatcca ccacggccac gccccggcca tcggcgccgg
     1381 cctgccggaa cgcctcgatc tggcgtcggg ccagcgcgat ctcggcctcg gtcggggcga
     1441 aggcctggtt cgcgacggcc agctgcgccg gatggatcag ggtcttgccg tcaaagccca
     1501 tgtcgcggcc ctgttcgcat tcggcccgca ggcccgcgtc atccctgaag gcgttgaaca
     1561 cgccatccac gatcaccttt cgaaaggcct tcgcggccag cagacacagc cccagcccgg
     1621 tctgcatcgg caatcggtcg gggcgaaaac ggctgttcag ttccttggcc aggtcgttcg
     1681 tgcccatgac catgccctgc aggcgcggat gggcggcgat ctcggccgcg ttcagcatcg
     1741 ccagcggcgt ttccatcatc gcccagaggg ccagatccgg gcacagcgcc gcgaccgcat
     1801 ccagatcggc cgcggtatcc accttggtga tcagcaccgc atcggcgca
//
LOCUS       DTVW01000465            1437 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1566800, whole
            genome shotgun sequence.
ACCESSION   DTVW01000465 DTVW01000000
VERSION     DTVW01000465.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1437)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1437)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1437
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1566800"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            360..1331
                     /locus_tag="EYO87_06225"
     CDS             360..1331
                     /locus_tag="EYO87_06225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011750469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siderophore-interacting protein"
                     /protein_id="HIC65583.1"
                     /translation="MFDRSHRSRGRIAHRSGAAAVALKARAAAWDLPLVETDEGLCLF
                     LWNCELRLTPEGAGLRIDLAAPDQRMLATLRDSASELFDEAGLAVAWDHVDTGALAPG
                     LSLVRVLSVMRRSPGFLRIRLRGADMPRFAQDGLHFRLLIPPPGRAPVWPRIGASGRT
                     IWPDGADAMHRPVYTVTGQDQDWLDFDAFAHADSPTCDWALAGPQGQQVGITGPGGGW
                     CPDARRLFLFGDQTALPAIARMLVLARGRVRAVLRCAPEDMGPLANDRRVIASDDLLG
                     ALALLGPLDQNDHVWFAGPANEARSARRMLRDRGLDKTGYTAAAYWG"
BASE COUNT          208 a          468 c          523 g          238 t
ORIGIN      
        1 gccgctgatc gtgcgcggac acgaggtcga gcagggctat ttccagctgg atccctgcaa
       61 cctgatgcag ggtcaggccc ggatggtgcg cgatatcctg gtcgcggggc tgagcgatgg
      121 cgcggcggcg gccgcgatcg acgccaaggc cgccgcggcc gccgcccgga acggcggcac
      181 gcaggcctat atggactggc tggcaggttg atcggcgccg gtccatctgc cctgcgactg
      241 agcgacgaac cgaagccggc gcgatcctgc gcccgccgcg cggccttgcc aaagggtatt
      301 gttgagtaaa tcacttcgtt ttatcgtccg gccagtttcg acatcggaaa gggtcaggca
      361 tgttcgaccg cagccaccga tcaaggggac ggatcgccca cagatcaggc gccgcagccg
      421 tcgcactgaa ggcgcgggcc gccgcctggg atctgcctct ggtcgaaacg gatgaggggc
      481 tgtgcctgtt tctctggaac tgcgaattgc gcctgacgcc cgagggcgcc ggcctgcgca
      541 tcgacctggc cgcaccggat caacggatgc tggccacgct gcgcgacagc gcctcggaat
      601 tgttcgacga ggccgggttg gcggtcgcgt gggatcatgt cgatactggc gcgctggcgc
      661 ccgggctttc actggtacgg gtgctgtccg tgatgcggcg cagccccggc tttctgcgga
      721 tccggctgcg cggtgcggac atgccacgct ttgcccagga cggcctgcat ttccggctgc
      781 tgatcccgcc gccgggccgc gcgcctgtct ggccacggat cggcgcctcg ggacggacca
      841 tctggcccga cggggcggat gcgatgcaca ggccggtcta taccgtgacc gggcaggatc
      901 aggactggct ggatttcgac gcgttcgcgc atgcggacag cccgacctgc gattgggcgc
      961 tggccggacc ccagggccag caggtgggca tcaccggtcc cggtggcggc tggtgtcccg
     1021 atgcgcggcg gctgttcctg ttcggcgacc agacggccct gccggccatt gcccggatgc
     1081 tggttctggc gcgcggcagg gtgcgcgccg tcctgcgctg cgcgcccgag gatatggggc
     1141 cgctggcaaa cgatcgccgc gtgattgcca gcgacgatct gctgggcgca ttggcccttc
     1201 tggggcctct ggatcagaac gatcacgtct ggttcgcggg accggccaac gaggcgcggt
     1261 cggccagacg gatgttgcgg gatcgcggcc tcgacaagac cggatacacg gccgcggcct
     1321 attggggctg agccttgccg gcaatggcaa gggaccgcgc ggcatccgga tttatcaggc
     1381 gggaatggcc acgcgggcgc catcgtcgcg ggtcagcacc tgcatcccca ggccata
//
LOCUS       DTVW01000466            3313 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1569025, whole
            genome shotgun sequence.
ACCESSION   DTVW01000466 DTVW01000000
VERSION     DTVW01000466.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3313)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3313)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3313
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1569025"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            21..353
                     /locus_tag="EYO87_06230"
     CDS             21..353
                     /locus_tag="EYO87_06230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018000360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HIC65584.1"
                     /translation="MNRDFWATEQIFWTGSAAEAIRRLDEAAVMVFAPTGILQGRAIA
                     SRLGGAPRWDSIVMDQRHVTESDDVTILAYRATAMREGITYRAFCSSTWIRRDDGWRL
                     IAHQQTPL"
     gene            358..990
                     /locus_tag="EYO87_06235"
     CDS             358..990
                     /locus_tag="EYO87_06235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011749894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1345 domain-containing protein"
                     /protein_id="HIC65585.1"
                     /translation="MRGVWRRHSRFLVALAVGALAVLVAPRGIIDRVLLGGDLFFAVY
                     LAASGLHARHLTAGDLRRHGREDDEGAGLIVALAVAAIALSLSAVIGALGTAKGQDSA
                     LQPLLAVLSVPLGWATLHMVMAFHYASRYYARQGSGKAAGGLDFPDTHDPGVWDFVYF
                     SFTLGMTAQTSDVAIRDTRLRRIATLHSALSFFFNTVILALAVNLAVSLG"
     gene            complement(999..2927)
                     /locus_tag="EYO87_06240"
     CDS             complement(999..2927)
                     /locus_tag="EYO87_06240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium transporter"
                     /protein_id="HIC65586.1"
                     /translation="MEGFLLLATVYLISMVVAVPISARLGLGSVLGYLICGILIGPVL
                     NLTGGRMSDLQNFAEFGVVMMLFLIGLELEPRSLWDMRSRLIGLGAAQVLITLAIFAL
                     IAAAFGAAWPQAIVLGMILSVSSTAIVLQTLTEKGLMQTAGGRSIFSVLLAQDIAVIP
                     MIALMPLLAPFGQPAAEAGAQEGEHLGQSMMAGLPGWGTALVTIGAVLAVIVLGQYLI
                     RPVFRFVIASRLREMETAMALLIVVGIASLMILVGLPPALGTFLAGVMLARSEFRHEL
                     EAQIEPFKGLLLGLFFITVGAGMDFAMLADRPLPILTAAAALIAVKAAILWVIARSHR
                     MDGRARTLFTLSLAQAGEFGFVLVSYAVVLLILPADLAKAMLLVIALSMLATPLLFIL
                     YDQATRRIGDARAEEQPDAIDEQQPIIIAGIGRFGQVVNRLVSMSGFRTTVLDHDLKL
                     IQLMRQFGFKGYFGDPSRPEILTAAGLDKARILVAALDDPEANLKLIRYARERRPDLH
                     IIARARDRVNVYQLHSAGANDIVRETFDSSLRAGRYVLENAGLSEYEASELEKIFYRL
                     DRASLRELAEIWKPGLPLDQNEAYITRSRELNRTLEAALLERFAEKSDPYPAGADEAD
                     PEHGLGPAGPGPRPGGRF"
BASE COUNT          558 a         1088 c         1118 g          549 t
ORIGIN      
        1 acgatcgaaa ggctggatgg atgaaccggg atttttgggc gaccgagcag attttctgga
       61 ccggcagcgc cgccgaggcg atccgcaggc tggacgaggc ggcggtgatg gtcttcgccc
      121 cgacgggcat ccttcagggt cgcgccatcg ccagcagatt gggcggcgcc ccgcgatggg
      181 acagcatcgt catggaccag cgccatgtca ccgaaagcga tgatgtgacg atcctcgcct
      241 atcgcgccac ggcgatgcgc gagggcatca cctacagggc gttctgttcc agcacctgga
      301 tccggcgcga cgacggctgg cggctgatcg cgcaccagca gacgcccctg tgatccgatg
      361 cgcggcgtct ggcgcaggca ttcgcggttt ctggtcgcgc tggcggttgg tgcgctggcc
      421 gtgcttgtcg cgccgcgcgg catcatcgac cgggtgctgc tgggcgggga tctgttcttt
      481 gccgtctatc tggcggcctc gggcctgcac gcccgtcacc tcacggcggg tgatctgcgc
      541 cggcatggcc gcgaggacga cgagggcgcc ggtctgatcg tcgcactggc ggtcgccgcc
      601 atcgcgctgt cgctctccgc cgtgatcggc gcgcttggga ccgccaaggg tcaggacagc
      661 gcgctgcagc cgctgctggc ggtcctgtcc gtgccgctgg gatgggccac gctgcacatg
      721 gtcatggcat tccactatgc ctcgcgctat tacgcccggc agggcagcgg caaggcggcc
      781 ggggggctgg atttccccga cacccatgat ccgggcgtgt gggatttcgt ctatttcagc
      841 tttacgcttg gcatgacggc gcagacctcg gacgtcgcga tccgggacac gaggctgcgg
      901 cgtatcgcga cgctgcattc ggcgctgtcc ttcttcttca ataccgtgat cctggcgctg
      961 gcggtgaacc ttgccgtatc cttgggttga aaccgcaatc agaaccgtcc gccaggccgc
     1021 gggccagggc cggcgggacc aagtccgtgt tcgggatcgg cttcgtccgc tccggccggg
     1081 taggggtcgg atttctcggc aaagcgttcc agaagcgccg cttccagcgt gcggttcagt
     1141 tcgcggctgc gggtgatgta ggcttcgttc tggtccagtg gcaggcccgg cttccagatc
     1201 tcggccagtt cccgcagcga tgcgcggtcc agccggtaga agatcttttc cagttcggac
     1261 gcctcgtatt ccgacaggcc ggcgttttcc agcacatagc ggccggcgcg cagcgagctg
     1321 tcgaaggttt cgcgcacgat gtcgttcgca ccggcagaat gaagttgata gacgttcacc
     1381 cggtcgcggg cgcgggcgat gatatgcagg tcggggcgcc gttcgcgggc atagcggatc
     1441 agcttcagat tggcctcggg atcgtccagc gcagcgacca ggatgcgggc cttgtccagt
     1501 ccggcagcgg tcaggatctc ggggcgcgag ggatcgccga aatagccctt gaacccgaat
     1561 tgccgcatca actggatcag tttcagatcg tggtccagga ccgtggttcg gaaacccgac
     1621 atgctgacca gacggttgac cacctgaccg aaccggccga tgcccgcgat gatgatcggc
     1681 tgctgttcgt cgatggcgtc gggctgttcc tcggcgcggg catcgccgat gcggcgcgtc
     1741 gcctgatcat agaggatgaa cagcagcggc gtcgccagca tgctgagcgc gatgaccagc
     1801 aacatcgcct tggcaagatc ggcgggaagg atcagcagca cgacggcgta ggagacaagg
     1861 acaaagccga actcgccagc ctgcgccagc gacagcgtga acagcgtgcg cgcccgtccg
     1921 tccatccggt gggaccgggc aatgacccag aggatcgcgg ccttcacggc gatcagcgcg
     1981 gccgcggcgg tcaggatcgg caaagggcga tcggccagca tcgcaaaatc catgcccgcg
     2041 ccgacggtga tgaagaaaag ccccagcaga agacccttga acggttcgat ctgggcttcc
     2101 agctcatgac ggaattcgga ccgcgccagc atcaccccgg ccagaaaggt gcccagtgcc
     2161 ggcggcagcc cgacaaggat catcagcgag gcgatgccaa ccacgatcag cagcgccatg
     2221 gcggtctcca tctcgcgcag gcgcgaggcg atgacaaagc ggaagaccgg gcggatcaga
     2281 tattggccca gcacgatcac cgccagcacg gcgccgatgg tcaccagcgc cgtgccccaa
     2341 ccgggcagcc ccgccatcat ggactggccc agatgctcgc cctcctgggc cccggcctct
     2401 gcggcgggct gtccgaaggg cgccagcagc ggcatcagcg cgatcatcgg gatcaccgca
     2461 atatcctgcg ccagcaggac cgagaagatg gatcgcccgc cggccgtctg catcagcccc
     2521 ttttcggtca gggtctgcag cacgatcgcg gtcgaactga ccgacaggat catgcccaga
     2581 acgatcgcct gcggccaggc cgcgccgaag gccgcagcga tcagcgcgaa aatggccagc
     2641 gtgatcagga cctgcgccgc gcccagcccg atcagccgac ttcgcatgtc ccacaggctg
     2701 cgcggctcca gttccagccc gatcaggaac agcatcatca cgacgccgaa ttccgcgaaa
     2761 ttctgaagat ccgacatccg gccgccggtc aggttcagca ccggcccgat caggatgccg
     2821 cagatcagat agcccaggac cgagcccagc cccagccgcg ccgaaatggg cacggccacc
     2881 accatgctga tcagatagac cgtggccagc agcagaaagc cttccatccc cgctattggc
     2941 cgttcagcac cgcaagctgc tgcgcgcgtc cgcccttcac gaaggtgatc cggctgttgc
     3001 cgatttcggt gatggtgccg ccgttgatcc tgtcgcccag acgcagggtc agaacgcgac
     3061 cgttcgacag gcggatcagg gcccggctgg ccttgcccgc gccgatcgtg ccgatgatct
     3121 gggtgcggtt gacctgaatg ccctccttga cggttgccgt cgccgccgcg gtggtggtga
     3181 tccggccatc gggcagggcg ccgcggacct cgggttcgtt ctcggcctcg ggcggggtgt
     3241 atgatcgctg gcggcgcgtg gcggccagac gctcggcctc gacctgggcg cgggcgcggg
     3301 cctcggcctg ggc
//
LOCUS       DTVW01000467            2237 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1569812, whole
            genome shotgun sequence.
ACCESSION   DTVW01000467 DTVW01000000
VERSION     DTVW01000467.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2237)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2237)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2237
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1569812"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(176..835)
                     /locus_tag="EYO87_06245"
     CDS             complement(176..835)
                     /locus_tag="EYO87_06245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009816954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tim44 domain-containing protein"
                     /protein_id="HIC65587.1"
                     /translation="MSNPMLQLIVLAAIAIFLILRLRNVLGTRDGFEPTKVDTPEPSR
                     RRFEVIEGTAEEAEDHDILDHADAGSPQADALAAMKSAEPSFNVRDFLNGAKSAHEMI
                     LMAFERGDLSEVRAFLDAPVAEAFQSVIDQRAAKGQTVEAQYLGTRETALHGADFDSA
                     TGAAEISVRFVAELVAATRDAEGKVIEGDPKAPRKQRDIWTFSRRMGQNDPNWQLVAT
                     G"
     gene            949..1488
                     /locus_tag="EYO87_06250"
     CDS             949..1488
                     /locus_tag="EYO87_06250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011749060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FxsA family protein"
                     /protein_id="HIC65588.1"
                     /translation="MWLFVLFVAIPLIEIALFIQVGGLIGLWPTLGIVLLTAVVGTAL
                     MRSQGARAWAEVQRSFAELRDPSRPLAHGVMILMAGMLLLTPGFFTDTLGLLLLIPAV
                     RDMVVRYLARHVRITRTRMGETPQDPRRPPYGDGAIDGDYVVEDDQRHPASRRPPDLP
                     PEPGDDQPPRRGHSGWTQH"
     gene            1546..2073
                     /gene="secB"
                     /locus_tag="EYO87_06255"
     CDS             1546..2073
                     /gene="secB"
                     /locus_tag="EYO87_06255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011749059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-export chaperone SecB"
                     /protein_id="HIC65589.1"
                     /translation="MADENNQNGAADGAEAAAQPQVRMQILAQYIRDLSFENAVATKG
                     APQGEVQPEMTVQVSLDARKRQADHQYEVISKFRVTSTNKGDGQTMFLVELDYGGVFH
                     IENVPEDQLHPFLMIECPRMLFPFVRRIISDLTRDGGFPPFNMDPVDFVALYRQELSR
                     RAQTQQGAPADQKLS"
BASE COUNT          358 a          719 c          756 g          404 t
ORIGIN      
        1 cgaaagtccg gcaacggggt gaccggcggc tttggcggcg gcagcgcgcc tttgccggcg
       61 gtggaggccg gaggtttcgg ttcggggcgg tcgcaatgca gcggcgtcgc ggtccgggcg
      121 atgcgcgacc acaactctcg ctcttccggc gtcaggcccc ggcgccgccg caccatcagc
      181 cggtcgcgac caactgccag ttcgggtcgt tctgacccat gcgccgcgag aaggtccaga
      241 tgtcgcgctg cttgcggggc gccttgggat ctccctcgat caccttgccc tcggcgtcgc
      301 gggtggccgc caccagttcg gccacgaagc ggaccgagat ttcggccgcg ccggtcgcgc
      361 tgtcgaaatc cgccccgtgc agggccgtct cgcgggtgcc cagatactgc gcctcgaccg
      421 tctggccctt cgcggcgcgc tggtcgatga cggattggaa cgcctcggcc accggcgcgt
      481 ccagaaaggc gcgcacctcg gacagatcgc ccctctcgaa ggccatcagg atcatctcat
      541 gggccgattt cgcgccgttg aggaaatccc gaacgttgaa ggacggctcg gccgatttca
      601 tcgccgcaag cgcatccgcc tgcgggctgc ccgcgtcggc atgatcgagg atgtcgtgat
      661 cctcggcctc ttccgccgtg ccctcgatca cctcgaagcg ccgccgtgac ggctcgggcg
      721 tgtcgacctt ggtcggctcg aacccgtcgc gagtgccaag cacgttgcgc aacctgagaa
      781 tcaggaaaat ggcgatcgcg gccaggacga tcagctgaag catcgggttg gacatgcggg
      841 taggggcccc tgttcttggc gatctgttgg tatctgcgct gtgggtcatt atgtaggatg
      901 cgagtcggcg caagtccagt ttttgcgcct gaatgaaggg gaattcgcat gtggcttttc
      961 gttctgttcg tggccattcc gctgatcgag atcgcactgt tcattcaggt cggcgggctg
     1021 atcggattgt ggccgacgct ggggatcgtg ctgctgaccg cggtcgtggg caccgcgctg
     1081 atgcgaagcc agggcgcgcg ggcctgggcc gaggtgcagc gttcctttgc cgaattgcgc
     1141 gatccgtcgc ggccgctggc gcatggcgtg atgatcctga tggcggggat gctgctgctg
     1201 acgccgggct ttttcaccga tacgctgggc ctgctgctgc tgattccggc ggtgcgcgac
     1261 atggtggtgc gctatctggc gcggcatgtc cggatcaccc ggacgcggat gggcgagacg
     1321 ccacaagatc cgcgacgccc gccatatggc gatggcgcga tcgacggcga ttatgtggtc
     1381 gaggacgatc agcgccaccc cgccagccgc cggccacccg acctgccgcc cgaaccaggc
     1441 gacgaccagc cgccacggcg cggccattcg ggctggactc agcattgagg cggaaggacg
     1501 cgcctgatag aagcagccgc aagtccgaac gtgcgaggaa cgaacatggc cgacgagaat
     1561 aaccagaacg gtgccgccga tggcgccgag gccgcggcgc agccgcaggt ccgtatgcag
     1621 atcctggccc agtatatccg cgatctgtcc ttcgagaacg cggtcgccac caagggcgcg
     1681 ccgcagggcg aggtccagcc cgagatgacc gttcaggtca gcctggacgc gcgcaagcgt
     1741 caggccgatc accaatacga ggtgatttcg aaattccgcg tcacctcgac caacaagggt
     1801 gacggccaga ccatgttcct ggtcgaactg gattatggcg gcgtgtttca tatcgagaac
     1861 gttcccgaag accagttgca ccctttcctg atgatcgaat gcccgcggat gctgtttccc
     1921 ttcgtgcggc gcatcatttc ggatctgacg cgcgacgggg gctttccacc cttcaacatg
     1981 gatccggtcg atttcgtggc gctgtatcgt caggaattgt cgcgccgcgc gcagacgcag
     2041 cagggcgcgc cggccgatca gaaactgtcc tgacggcggt cttcggtcat gccgccgcgc
     2101 cagcgccggg cctggcagcg gatgctgtcg ggccgcaggc tggatctgct ggaccccacc
     2161 cccttcgaca tcgagatcga ggacatcgcc catggtctgg ccttcgtcgc ccgctggaat
     2221 ggccagacgc atggcga
//
LOCUS       DTVW01000468            1477 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1570629, whole
            genome shotgun sequence.
ACCESSION   DTVW01000468 DTVW01000000
VERSION     DTVW01000468.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1477)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1477)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1477
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1570629"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..350
                     /locus_tag="EYO87_06260"
     CDS             <1..350
                     /locus_tag="EYO87_06260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018000007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HIC65590.1"
                     /translation="AAELRAIWVLGNEYLQTAAPWASFKTDPEQAAMQVRLGLNLIRF
                     HAVLSAPFIPFAARAMLEAMQTDQTDWPGDVAQALETLPAGHAFTVPDVLFAKITDDQ
                     RAEWADRFRGARA"
     gene            379..1302
                     /gene="rocF"
                     /locus_tag="EYO87_06265"
     CDS             379..1302
                     /gene="rocF"
                     /locus_tag="EYO87_06265"
                     /EC_number="3.5.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010398297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginase"
                     /protein_id="HIC65591.1"
                     /translation="MTHCILIGAPVDEGQRRPGCLMGPAAYRTAGLAGTLTALGHTIE
                     DRGDVVPDRPGNETCANAAVHHLPETIAWTNALREAVAAALPEGMPIIMGGDHSLALG
                     SVAGVAAHAAQTQRPQFVIWLDAHSDFHTLRTTTTGNLHGTPMAYASGLPGFGPFPPF
                     PAPIPGENICMFGIRSVDPAEHAAMQDTEITVNDMRVLDEQGIVAPLRAFLNRVRATG
                     GLLHVSLDVDFLDPSIAPAVGTTVPGGTTFREAHLVMELLHESGLVTSLDLVELNPFL
                     DDRGRTAKLMVDLVGSLMGRKVFDRPTRSYG"
     gene            1380..1464
                     /locus_tag="EYO87_06270"
     tRNA            1380..1464
                     /locus_tag="EYO87_06270"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:1.23"
                     /anticodon=(pos:1413..1415,aa:Leu,seq:taa)
BASE COUNT          247 a          520 c          467 g          243 t
ORIGIN      
        1 ccgcggccga actgcgcgcg atctgggttc tgggcaacga atacctgcaa accgccgcgc
       61 cctgggccag cttcaagacc gatcccgaac aggccgcgat gcaggtgcgt ctggggctga
      121 acctgatccg gttccatgcg gtcctgtcgg ccccgttcat ccccttcgcc gcccgcgcga
      181 tgctggaggc gatgcagacg gaccagaccg attggccggg cgacgtggca caggcgcttg
      241 aaacccttcc cgcaggccat gccttcaccg tgcccgacgt gcttttcgcc aagatcaccg
      301 acgatcagcg cgccgaatgg gccgatcgtt tcaggggcgc gcgggcctga accccgcgcc
      361 cggcatcagg agaccgagat gacgcattgc atcctcatcg gcgcccccgt ggacgagggc
      421 cagcggcgcc ccggctgcct gatgggcccc gcagcctatc gcaccgccgg actggcgggc
      481 acgctgaccg cacttggcca cacgatcgaa gatcgcggcg atgtcgttcc cgaccgaccg
      541 ggaaacgaga cctgcgccaa tgccgccgtt caccatctgc cggaaaccat cgcctggacg
      601 aatgcgctgc gcgaggcggt cgccgccgcg ctgcctgaag ggatgccgat catcatgggc
      661 ggtgatcatt cgctggcgct cggctcggtc gcgggggtcg cggcccatgc tgcacagacg
      721 caacgcccgc aattcgtcat ctggctggac gcccacagcg acttccatac ccttcggacc
      781 acgaccacgg gcaatctgca cggcacgccc atggcctatg ccagcgggct gccgggattc
      841 ggaccgtttc cgccctttcc cgcgccgata ccgggcgaga acatctgcat gttcggcatc
      901 cgcagcgtcg acccggccga acatgcggca atgcaggata ccgagatcac cgtcaacgac
      961 atgcgggttc tggacgaaca gggcatcgtc gcaccgctgc gcgcctttct gaaccgcgtc
     1021 cgggccaccg gcggcctgct gcatgtcagc ctggatgtcg atttcctcga cccctcgatc
     1081 gcgcccgccg tcggcaccac ggttcccggc ggcaccacct tccgcgaggc gcatctggtg
     1141 atggagcttc tgcacgaatc cggccttgtc acctcgctgg acctggtcga actgaacccg
     1201 ttcctcgacg atcgcggtcg gacggcgaag ctgatggtcg atctggtcgg ctcgctgatg
     1261 ggccgcaagg tctttgaccg tcccacccgc agctatggct gatggcgcgc ggcggcggaa
     1321 gccgaggttc cgcttgatta atcaggaccg cttggctagc cacggccgac ggtgccgatg
     1381 cgggcgtggt ggaacggtag acacaagcga cttaaaatcg ctagagcctg gctcgtgcgg
     1441 gttcgattcc cgccgcccgc accaaggcag acattga
//
LOCUS       DTVW01000469            1536 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1570773, whole
            genome shotgun sequence.
ACCESSION   DTVW01000469 DTVW01000000
VERSION     DTVW01000469.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1536)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1536)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1536
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1570773"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..635
                     /locus_tag="EYO87_06275"
     CDS             <1..635
                     /locus_tag="EYO87_06275"
                     /EC_number="1.6.5.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352577.1"
                     /note="Catalyzes the transfer of electrons from NADH to
                     quinone; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit D"
                     /protein_id="HIC65592.1"
                     /translation="DLDGLLTENRIFKQRNVDIGIVHEQDVLDWGYSGVMVRGSGMAW
                     DLRRSQPYECYDEFDFHIPVGKNGDCYDRYLVRMEEMRQSVRIMRQAIDKLREPAGQG
                     DILARGKLTPPRRSEMKRDMESLIHHFKLYTEGFRVPAGEVYAAVEAPKGEFGVYLTS
                     DGTNKPYRAKLRAPGFLHLQSIDWMARGHLLADVSAIIGTMDIVFGEVDR"
     gene            635..>1536
                     /gene="nuoE"
                     /locus_tag="EYO87_06280"
     CDS             635..>1536
                     /gene="nuoE"
                     /locus_tag="EYO87_06280"
                     /EC_number="1.6.5.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoE"
                     /protein_id="HIC65593.1"
                     /translation="MLRRLSPEQPDGFAFTPKNREWAEAQMTKYPQGRRQSAIIPILW
                     RAQEQEGWLSRPAIEYCADLLDLPYIRALEVATFYFMFQLKPIGSVANIQICGTTTCM
                     ICGAEALIEVCKRKIAPNPHMVSADGKFSWEEVECLGACANAPVAQIGKDYYEDLTPE
                     KLERLIDAFSEGQVPLPGPQNGRFASEPASGLTSLTEREGNELNASASLARRHGDTVK
                     RIDGTEVPILTKWLDRDRPAAAADDQTGLDAGPRHDPRPANGQPADKTGVTEHEAQAA
                     SAANPPSDREPEGVRAQEDAVEKD"
BASE COUNT          306 a          490 c          489 g          251 t
ORIGIN      
        1 acgatcttga cgggctgctg accgagaacc ggatcttcaa gcagcgcaat gtcgatatcg
       61 gcatcgtcca tgaacaggac gtgctggact ggggctattc cggcgtgatg gtgcgcggtt
      121 cggggatggc ctgggatctg cggcggtcgc agccctacga atgctatgac gaattcgact
      181 ttcacatccc ggtcggcaag aatggcgatt gctatgaccg ttatctggtc cgcatggaag
      241 agatgcgcca gtcggtccgc atcatgcggc aggcgatcga caagctgcgc gaaccggccg
      301 ggcagggcga catcctggcg cgcggcaagc tgaccccgcc ccggcgcagc gagatgaagc
      361 gcgacatgga aagcctgatc caccatttca agctgtatac cgagggtttc cgggttcccg
      421 ccggcgaggt ctatgccgcg gtcgaggccc ccaagggcga gttcggcgtc tacctgacca
      481 gcgatggcac caacaagccc tatcgcgcca agctgcgcgc gcccggtttc ctgcatcttc
      541 aatccatcga ctggatggcc aggggccact tgctggccga tgtttccgca attatcggca
      601 cgatggatat cgtgttcgga gaggttgacc gctgatgctt cgccgactga gccccgaaca
      661 acccgacggc ttcgccttca cgcccaagaa ccgggaatgg gccgaggcac agatgaccaa
      721 atacccgcaa ggccgcaggc aatcggcgat catcccgatc ctgtggcgcg cgcaggaaca
      781 ggaaggctgg ctgtcgcgcc cggccatcga atattgcgcc gatctgctgg atctgcccta
      841 tatccgggcc ctggaagtcg ccacattcta cttcatgttc cagcttaaac ccattggatc
      901 ggttgccaat atccagatat gcggcaccac gacctgcatg atctgcgggg ccgaggcgct
      961 gatcgaggtc tgcaagcgca agatcgcgcc caatccgcac atggtctcgg ccgacggcaa
     1021 gttcagctgg gaagaggtcg aatgcctggg cgcctgcgcc aatgcgccgg tggcccagat
     1081 cggcaaggat tactacgagg atctgacgcc cgaaaagctt gaacggctga tcgacgcctt
     1141 ttccgaaggt caggtgccgc tgcccggtcc gcagaacggc cgtttcgcat cggaacccgc
     1201 gtcggggctg accagcctga ccgaacgcga gggcaatgag ctgaatgcca gcgcatcgct
     1261 tgcgcggcgt catggcgaca cggtgaagcg gatcgacggg accgaggttc cgatcctgac
     1321 gaaatggctg gatcgcgacc gccccgccgc ggccgcggat gatcagaccg ggctcgatgc
     1381 cgggccccgg cacgacccgc gccccgccaa tggccagccc gccgacaaga ccggcgtgac
     1441 cgaacacgag gcacaggccg cctcggccgc caatccgcct tccgaccgcg aacccgaggg
     1501 cgtgcgcgcg caggaagatg cggtcgagaa agacga
//
LOCUS       DTVW01000470            1484 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1571538, whole
            genome shotgun sequence.
ACCESSION   DTVW01000470 DTVW01000000
VERSION     DTVW01000470.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1484)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1484)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1484
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1571538"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            34..597
                     /locus_tag="EYO87_06285"
     CDS             34..597
                     /locus_tag="EYO87_06285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011513293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction endonuclease subunit S"
                     /protein_id="HIC65594.1"
                     /translation="MQDLITARRRLPGFSGEWEVKRLGAALTVRHGRSQKEVEHPAGE
                     FPILATGGQIGTATKFLCDKPSVLIGRKGTIDAPRFMDKPFWSVDTLFYTDVHTGFDA
                     KFLFYVFLMVDWMSYNEASGVPSLNAKTIENIEVSIPKLGEQQAIAAVLSDMDTEIQT
                     LESRLTKVRAVKEGMMQNLLTGRVRLA"
     gene            628..>1484
                     /locus_tag="EYO87_06290"
     CDS             628..>1484
                     /locus_tag="EYO87_06290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012482781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction endonuclease subunit R"
                     /protein_id="HIC65595.1"
                     /translation="MAIGDPERATQNRMIAQLCGDTSGRPGGLGWRYLGDWQKREGNA
                     NIEPSLLRPWLLSRGHDPEVATKAITELQRAARMDGLKLYEANRATYDMLRYGVQVTP
                     GPGEAPVTVRFVDWDNPAANDLGVAEEVAVTAKNPKAYNKRPDLVMYVNGIAMGVVEL
                     KKSTVDLGAGIRQTLDNQRPEFIRHFFTTVQITFASNDMQGLRYAAIQTPQPYWLAWK
                     EESTITNPLDRDVAQMLTPARFLELINDFILFDAGIKKVARPNQYFAVKAAQEAVAAR
                     KGGIIWQTQG"
BASE COUNT          303 a          455 c          456 g          270 t
ORIGIN      
        1 atcgccaaga agcgcctgat caagcagggc gcgatgcaag acctcatcac cgcccgccgc
       61 cgcctcccgg gcttctcggg ggagtgggag gtaaagcggt tgggtgctgc tctgaccgtc
      121 cgacacggca ggtcacagaa agaggtagaa caccctgcgg gtgagtttcc gatcctcgca
      181 acgggggggc agattggcac agcgaccaag tttctttgtg acaagccttc tgtgctgatt
      241 ggtcggaagg gcacgattga cgcgccgcgt ttcatggata agccgttctg gtcggtggat
      301 actctgttct acacggatgt tcataccggc tttgatgcca agttcctttt ctatgttttc
      361 ctgatggttg actggatgtc ctacaacgag gcgtccggtg ttccgagttt gaacgcaaag
      421 accatcgaaa acatcgaggt ttccattccc aagttaggcg aacagcaagc catcgccgcc
      481 gtcctctccg acatggacac cgaaatccag accctcgagt cccgcctgac caaggtgcgg
      541 gcggtgaagg aggggatgat gcaaaatctt ttgacagggc gggtcaggct ggcctgactg
      601 ggtgacaatt tccaaggggg tatttccatg gccatcggcg atccggaacg cgccacgcaa
      661 aaccgcatga tcgcgcagct gtgcggcgat acctccgggc gccccggcgg cctcggctgg
      721 cgctatcttg gcgactggca gaagcgcgag ggaaacgcca atatcgaacc ctccctgttg
      781 cgcccctggc tcttgtcccg tggccatgac cccgaggtgg cgaccaaggc cattaccgag
      841 ttgcaacgcg ccgcccggat ggacgggctg aagctttatg aggcgaaccg cgccacctat
      901 gacatgctgc gctacggcgt gcaggtcacc cccggccccg gcgaggcccc tgtcaccgtg
      961 cgctttgtcg attgggacaa ccccgccgcc aatgatctgg gcgtcgccga agaggtggcg
     1021 gtcacggcga agaaccccaa ggcctataac aagcgccccg atctggtgat gtatgtgaac
     1081 ggcatcgcca tgggcgtggt ggagttgaag aaatccaccg tcgatctggg cgcgggcatc
     1141 cgccagacgc tggacaacca acgccccgaa ttcatccgcc acttcttcac cacggtgcag
     1201 atcaccttcg caagcaacga catgcagggc ctgcgctatg ccgcgatcca gaccccgcag
     1261 ccctattggc tggcctggaa ggaggagagc acgatcacca acccgctcga ccgcgatgtg
     1321 gcgcagatgc tgacccccgc gcggttcttg gagctgatca acgacttcat cctgttcgac
     1381 gcaggcatca agaaggtcgc ccgccccaac cagtatttcg ccgtgaaggc cgcgcaagag
     1441 gcggtggcgg caaggaaggg cgggatcatc tggcagaccc aagg
//
LOCUS       DTVW01000471            1227 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1572050, whole
            genome shotgun sequence.
ACCESSION   DTVW01000471 DTVW01000000
VERSION     DTVW01000471.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1227)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1227)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1227
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1572050"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..328)
                     /locus_tag="EYO87_06295"
     CDS             complement(<1..328)
                     /locus_tag="EYO87_06295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014875710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HIC65596.1"
                     /translation="MIRLVPRDQTSAAWQIATPLLAVLATMIAGGLLFAIMGYDPLAA
                     IRTIFWDPLFGPAAGYSRPQLLVKAAPLILIASGLAVGFRAGIWNIGAEGQYIIGGIT
                     GAAVALA"
     gene            complement(325..>1227)
                     /locus_tag="EYO87_06300"
     CDS             complement(325..>1227)
                     /locus_tag="EYO87_06300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011570125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HIC65597.1"
                     /translation="RATILRGGKVVDSCDPRAHSARELAAMMVGGEMRPIDRSGRQAG
                     KILLEVKSLSLPAPNAEGTALKSVSLSLRAGEILGIGGVAGNGQEELLAALSGEVRSA
                     PGTILLEDRDLGATPPQARRRAGLLAAPEDRLGHAAVPDFSLTENTLLTAGPRKGLVR
                     KGLIDRSAARAYAEQVIRDFDVRTPGPSTAARALSGGNLQKFVIGREVLQAPRVLVVN
                     QPTWGVDAGAATAVRQSLLDLARGGAGVIVISQDLDELMELSDRFCALNEGRLSDPRP
                     TAGLNLDEIGLMLGGAHGMEVAQI"
BASE COUNT          202 a          437 c          417 g          171 t
ORIGIN      
        1 ccgccagcgc gaccgccgcg ccggtgatgc cgccgatgat gtattggccc tcggcgccga
       61 tattccagat accggcgcga aagcccaccg ccagccccga ggcgatcagg atcagcggcg
      121 cggccttgac cagcaattgc gggcgcgaat agccggcggc aggcccgaac agcggatccc
      181 agaagatcgt gcggatcgcg gcaagcgggt cgtaacccat gatcgcgaac aacaggccgc
      241 ccgcgatcat cgtcgccagg accgccagca gaggcgtcgc gatctgccat gcggccgagg
      301 tctggtcgcg tggaacgagg cggatcatat ctgcgcgacc tccatcccgt gcgcgccgcc
      361 cagcatcagg ccgatctcgt cgaggttcag cccggctgtc ggacgcggat cggacagacg
      421 gccttcgttc agcgcgcaga aacggtcgga caattccatc agttcgtcga gatcctgaga
      481 gatcacgatc acgcccgccc cgccgcgcgc cagatccagc agcgactgac gcaccgcggt
      541 ggcggcgccg gcatcgacgc cccatgtcgg ctgattgacg accagaacgc gcggcgcttg
      601 caagacctcg cgcccgatga cgaatttctg caagttgccg cctgacaggg cgcgcgcggc
      661 ggtagaaggc cccggcgtgc gcacgtcgaa gtcgcggatc acctgttcgg cataggctcg
      721 ggcggcggag cgatcgatca ggcccttgcg gaccaatccc ttgcgcggtc cagcggtcag
      781 cagcgtgttc tcggtcaggc tgaaatcggg cacggccgca tggcccagcc gatcctcggg
      841 cgcggccaga agcccggccc tccgccgcgc ctgcgggggg gtggcgccca gatcgcggtc
      901 ctccagcaga atcgtgcccg gcgcgctgcg aacctcgccc gacagggcgg ccagcaattc
      961 ctcctgcccg tttccggcga cgccgccgat gcccaggatc tcgcccgcgc gcaggctgag
     1021 agagactgat ttcagcgccg tgccctcggc gttgggggcg ggcagagaca gggacttgac
     1081 ctccagcagg atcttgcccg cctgccgccc gctgcggtcg atcggacgca tctcgccgcc
     1141 gaccatcatc gcggccagtt cgcgggcgga atgggcgcgg gggtcgcaac tgtccacgac
     1201 cttgccgccg cgcaggatcg tggcgcg
//
LOCUS       DTVW01000472            1308 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1572132, whole
            genome shotgun sequence.
ACCESSION   DTVW01000472 DTVW01000000
VERSION     DTVW01000472.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1308)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1308)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1308
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1572132"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            178..>1308
                     /locus_tag="EYO87_06305"
     CDS             178..>1308
                     /locus_tag="EYO87_06305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008243860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HIC65598.1"
                     /translation="MTYLETLKHPVIRRLSLIQFISYFGTWFSQVALFSMLVSLGADA
                     VTISFTAAMAMLPAVVLAPVIGIVIDRVDFKKLMLTLLLVEISMTLGFIFIDSLEYVW
                     ILMILIFFRSGAASMLFSAEMTLFPKLVSGEMLKNTNEIHSIIWSLCYALGMAVGGVA
                     THYMGFDTAFMIDAALYGLAVLLLLGLHISLEKVLHTDSNWKMFKDGFSYLASNKKIL
                     HLLFVHASIGLTSFDALVTLLADFEYKALIAVPLAIGYMNATRALGLMIGPFFIGKVI
                     SKDNLHYFFILQGLAIILWSQLEYNFYFALVSLFVTGFFITTLWSYTYLLIQEETDPQ
                     YMGRVISYNDMFFMLSNIATALFIGYASTWGLSLESITFTLGV"
BASE COUNT          351 a          290 c          252 g          415 t
ORIGIN      
        1 cagatgccaa aagatgtgga gttctcttca ctacctaaaa taacagaaaa tggatggtca
       61 gtgagtattt ctgttgcttc tgatgatgcc aaacaatgta aagatgtttt tgcactatat
      121 ctaaaggtac ttgataccca caacatccca tatagattag aagacaaagc ataattggtg
      181 acttacttag aaaccttaaa acaccctgtc ataaggcgac tctcactcat ccaatttatc
      241 tcttattttg gtacgtggtt ttcacaagtg gcactgtttt ctatgcttgt ctctttgggt
      301 gcagacgcag tgaccatctc ttttaccgct gctatggcga tgttacctgc ggtggtcttg
      361 gctcccgtca taggcatagt catcgaccgt gtagacttca agaagctgat gttgacactt
      421 ttgctagtag agataagtat gacgcttggg tttatattta tcgactcttt ggagtatgtg
      481 tggatactga tgatactcat cttctttcgt tcaggagcag cttctatgct tttctctgca
      541 gagatgacac ttttcccaaa acttgtctct ggtgagatgc ttaaaaatac aaatgagata
      601 cactcaatca tctggtcact ttgttacgct ttgggcatgg cagtaggtgg tgttgcaaca
      661 cactacatgg gctttgacac agcctttatg atagatgctg ctctttatgg tttggctgtg
      721 ttacttttac taggtctaca catctcctta gaaaaagtgc tacatacaga ctctaactgg
      781 aagatgttca aagatggttt tagctacctc gcttcaaata aaaagatact acacctctta
      841 tttgtacatg caagcatagg actcacctct tttgatgctc tggtcacctt acttgcagac
      901 tttgagtaca aggcactcat cgccgtacct cttgccatag ggtacatgaa tgccacacga
      961 gccttaggac tgatgatagg accttttttc ataggaaaag tcataagcaa agataacctt
     1021 cactactttt tcatactcca aggactagcc atcatcttat ggtcacaact agagtacaac
     1081 ttttactttg ccttagtttc tctctttgta acagggtttt tcatcacgac actttggtca
     1141 tacacctacc tactcataca agaagagaca gacccccagt acatgggaag agtcatctcc
     1201 tacaatgaca tgttcttcat gctctccaac atcgctacag cactcttcat aggctatgct
     1261 tcaacatggg gacttagctt ggagagcatc acttttactc tgggtgta
//
LOCUS       DTVW01000473            1772 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1576698, whole
            genome shotgun sequence.
ACCESSION   DTVW01000473 DTVW01000000
VERSION     DTVW01000473.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1772)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1772)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1772
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1576698"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..704
                     /locus_tag="EYO87_06310"
     CDS             <1..704
                     /locus_tag="EYO87_06310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009570079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HIC65599.1"
                     /translation="MAAAAAWVDADTLAISTETGLRLFDIASGAHEPLAGIEADNAAT
                     RCNDGRADPMGGFWVSTMGKRAEPGAGAIYRYYRGAVAPLFTAITIPNAICFAPDGRR
                     AYFADTPTGRIMTVALDAQGWPDGAPEVFADLAAEGLNPDGAQTDAQGGVWNAQWGAG
                     RVARYRPDGSFDRAIAVGGRHASCPAFGGPDFATLFVTTARQGIEAPDAGQGCVYQAP
                     AGIAGRAEPALLLGR"
     gene            complement(903..1763)
                     /locus_tag="EYO87_06315"
     CDS             complement(903..1763)
                     /locus_tag="EYO87_06315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009816974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyhydroxybutyrate depolymerase"
                     /protein_id="HIC65600.1"
                     /translation="MIRRQIGLLISLVMLALALPGLARAGCADRKAACQVQAGAVSDS
                     YHLVLPGGEAPPGGWPAVVMLHGWGSDGSGILAMSGVVRELTGRGYAVIAPDGSPREG
                     RDGRQWLFPRQGRAAGRDEGAFLRAVANDAARRQGLNRARMVLAGFSVGGSMVSYVAC
                     DTPGSFAAYAPVGGSFWRPMPRACAGPVRLFHTHGWRDGTVPLEGRAVGGGTAVQGDV
                     FAAMAIWRAANRCPRSQPDGFAGDPSFQIRRWSDCAPGASLVLALHPGGHVLPKGWAT
                     AMLDWFEAGP"
BASE COUNT          265 a          677 c          616 g          214 t
ORIGIN      
        1 agatggccgc cgccgccgcc tgggtcgatg ccgacacgct ggcgatttcc accgagaccg
       61 ggctgcggct tttcgacatc gccagcggcg cgcacgagcc gctggccgga atcgaggccg
      121 acaacgctgc gacgcgctgc aatgacggac gggccgatcc gatgggcggg ttctgggtct
      181 cgaccatggg caagcgggcc gaaccggggg cgggggcgat ctatcgctat taccgggggg
      241 cggtcgcgcc gctgttcacc gcgatcacca tccccaatgc gatctgtttc gccccggatg
      301 gacgccgcgc ctatttcgcc gataccccga ccggccggat catgacggtc gcgctggatg
      361 cgcagggctg gcccgatggc gcgcccgaag tcttcgccga tcttgccgcg gaaggactga
      421 accccgacgg cgcccagacc gatgcccagg gcggggtctg gaacgcgcag tggggcgccg
      481 ggcgcgtggc ccgctatcgc cccgatggca gcttcgatcg ggccatcgcg gtgggcgggc
      541 ggcacgcatc ctgtcccgcg ttcggcgggc cggatttcgc gaccctgttc gtcaccaccg
      601 cgcggcaggg aatcgaggca ccggatgcgg ggcagggctg tgtctatcag gcgcccgccg
      661 gaatcgcagg ccgcgccgag cccgcactgc tgctgggccg ctgatcgccg cgcggggcgt
      721 cgtccgatcg ggccgtggca atcgcagccg gtcccggtcc ggcgcgccgc ctgcaacagg
      781 aaccggtccg gcaggtgctg cgcaggatcg gttgccacgg catccaggca ggcaccggca
      841 cgacatccgg cgacggcatc ggctggtccg tcctgtccgc ccgcgcgatc agggccggtc
      901 ggtcacggcc cggcctcgaa ccagtccagc atcgccgtcg cccagccctt cggcaacaca
      961 tggccgcccg gatgcagcgc gaggaccagc gatgcgccgg gcgcgcaatc gctccaccgc
     1021 cggatctgga acgacggatc gcccgcgaaa ccgtcgggct ggctgcgcgg gcagcggttc
     1081 gccgcgcgcc agatcgccat ggcggcgaag acatcgccct gcaccgccgt gccgccaccg
     1141 accgcgcgac cctccagcgg gacggtgccg tcgcgccagc catgggtgtg gaacagccgc
     1201 accggaccgg cgcaggcgcg cggcatcggt cgccagaaac tgccgccgac cggggcatag
     1261 gcggcgaaac tgccgggcgt gtcgcaggcc acgtaactga ccatcgagcc gccgaccgaa
     1321 aatcccgcga gaaccatccg cgcccggttc aggccctggc ggcgggcggc atcgttggcc
     1381 acggcgcgca ggaacgcgcc ctcgtcacgg ccagccgcgc gcccctggcg cggaaacagc
     1441 cattgccgcc cgtcgcgccc ctcgcgcggg ctgccatccg gggcgatcac cgcatagcca
     1501 cgcccggtca gctcgcgaac caccccggac atggccagga tcccggatcc gtcactgccc
     1561 cagccatgca gcatcaccac cgccggccag ccaccgggcg gcgcctcgcc cccgggcagg
     1621 accagatgat agctgtctga aaccgcgccc gcctgaacct ggcaggccgc cttccggtcg
     1681 gcgcatccgg cccgcgccag acccggcagc gccagcgcca gcatcaccag cgaaatcagc
     1741 agcccgatct gccgccggat catggccgcg cc
//
LOCUS       DTVW01000474            2331 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_158038, whole
            genome shotgun sequence.
ACCESSION   DTVW01000474 DTVW01000000
VERSION     DTVW01000474.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2331)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2331)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2331
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_158038"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            220..1374
                     /locus_tag="EYO87_06320"
     CDS             220..1374
                     /locus_tag="EYO87_06320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006931451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HIC65601.1"
                     /translation="MTIVPVTSADLDAVEVAWFSALCSDDYQFLGVPDGDLRSSWDHC
                     SDIVKTAEAQGFGNILCPSSYQVGQDTLSFVAGCAPITERINLLAAVRCGEMQPIMLA
                     RTIATLDHMLQGRLTVNIISSDFPGQKEDSKHRYKRSREVVEILKQAWSRDQIDYEGE
                     VYSFAGLTTDPAKPYQQGGPMLYFGGYSPDALDLCGQHCDVYLMWPEKTEDIAARMKA
                     AHEAAERYGRTLDYGFRAHVIVRDTEAEARDYARYIASKLDDELGQAIRERALDAGSL
                     GVSHQARNRELADLEGYVEPNLWTGVGRARSGCGAAIVGSTDQVLSKLEELQGMGIRA
                     FILSGYPHLDEAEHFGSRVLPQMKTCQLNRVRGRVPDALPRTPLGAGVRR"
     gene            1374..2288
                     /locus_tag="EYO87_06325"
     CDS             1374..2288
                     /locus_tag="EYO87_06325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014879806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HIC65602.1"
                     /translation="MDTLGDFAADRVRIAEGLSLSRLVYGMWRLGDDADISAGHVRAK
                     IDAALDRGITTLDQADIYGDYTAEAILGQAFRADPGLRNRVELVTKCGIVAPCGRYAD
                     AACKHYDTSAAHITASVEKSLRDLGADHIDLLLIHRPDPLMDPHETGAALDGLIRSGK
                     IRAAGVSNFRPWDVELLQAAMRNTLVTNQIELSLARPQPFADGDLAFHQRRGDPVMAW
                     SPLGGGSLMRGDTALTRRMDALAGEFGVDRAAIAVAFLLRHPATILPVLGTNSLVRIA
                     AIPDARKVDLTRVQWFQLYEAALGREVA"
BASE COUNT          395 a          746 c          787 g          403 t
ORIGIN      
        1 cagcttctga ccatcgacca gccgccccga ggcgatgtcc cggatcagga tctcgctgat
       61 ctgcatgtag atcggcagcg cgtcgggccg gtggcctgcg ggtctgcccc tgtcctgcat
      121 gatttcgcct gtcccgtgcg accagaattg ataccctatt gatttacacc aaaggcggag
      181 ctagtaaaga ccgaatttca gcgacccgag ggagggaaca tgaccattgt cccggtgaca
      241 tctgcggatc tcgacgcggt cgaggtggcc tggttttcgg cgctctgctc ggatgattac
      301 cagtttctcg gggtgccgga cggcgatctc cggtcgtcct gggatcattg ttcggacatc
      361 gtcaagaccg ccgaggcaca gggcttcggc aatatcctgt gcccctcgtc ctatcaggtg
      421 ggccaggaca cgctgagctt tgtcgccggc tgcgcgccga tcaccgaacg catcaacctg
      481 ctggccgccg tgcgctgcgg cgagatgcag ccgatcatgc tggcgcgcac catcgcgacg
      541 ctggatcaca tgttgcaggg gcggctgacg gtaaacatca tctcgtccga ctttccgggc
      601 cagaaagagg acagcaagca ccgatacaag cggtcgcgcg aggtggtcga gatcctgaaa
      661 caggcctgga gtcgcgacca gatcgattac gagggcgagg tctacagctt tgccggcctg
      721 accacggatc cggccaaacc ctatcagcag ggcgggccga tgctgtattt cggcggctat
      781 tcgcccgacg cgctggatct gtgcgggcag cattgcgatg tctatctgat gtggcccgaa
      841 aagaccgagg acatcgccgc caggatgaag gccgcccacg aggccgccga acgatacggg
      901 cggacgctgg attacggatt ccgcgcccat gtcatcgtcc gcgacaccga ggccgaggcc
      961 agggactatg cccgctacat cgccagcaag ctggacgacg aactggggca ggcgatccgc
     1021 gaacgggcgc tggatgcggg cagcctgggc gtcagccatc aggcgcgcaa ccgcgaactg
     1081 gccgacctgg aaggctatgt cgaaccgaac ctttggaccg gggtgggccg ggcgcggtcg
     1141 ggctgcggcg cggccatcgt cggctcgacc gatcaggttc tgagcaagct ggaggaattg
     1201 caggggatgg ggatccgcgc cttcatcctg tcgggctatc cgcatcttga cgaggccgaa
     1261 catttcggca gccgcgtgct gccgcagatg aagacctgcc agctgaaccg ggtccggggg
     1321 cgggtgcccg atgccctgcc gcgcacgccg ctgggcgcgg gggtgcggcg ctgatggata
     1381 cgctggggga tttcgccgcc gaccgggttc gcattgccga gggtctcagc ctttcgcggc
     1441 ttgtctacgg catgtggcgg cttggcgatg atgccgacat ctcggccggg cacgtgcgcg
     1501 ccaagatcga cgcggcgctg gaccggggca tcaccaccct ggatcaggca gacatctatg
     1561 gcgattatac cgccgaggcg atcctgggac aggctttcag ggccgatccg ggactgcgca
     1621 acagggtcga gctggtcacg aaatgcggta tcgtcgcgcc ctgcggacga tacgcggacg
     1681 cggcctgcaa gcattacgac acctcggccg cccatatcac cgcctcggtc gagaagtcgc
     1741 tgcgcgacct gggggccgat catatcgacc tgctgctgat ccaccgcccc gatccgctga
     1801 tggatcccca cgagaccgga gcggcgctgg acgggctgat ccggtcgggc aagatccgcg
     1861 ccgccggcgt gtcgaatttc cggccctggg atgtcgagct gctgcaagcc gccatgcgga
     1921 acacgctggt cacgaaccag atcgaattgt cgctggcccg gccgcagccc ttcgcggatg
     1981 gcgatcttgc ctttcaccag cgccgcggcg atccggtcat ggcctggtcg ccgctgggcg
     2041 gcggcagcct gatgcggggc gataccgccc tgacccggcg gatggacgcg ctggccgggg
     2101 aattcggcgt cgatcgcgcg gccatcgcgg tggctttcct gctgcggcac ccggcgacga
     2161 tcctgccggt tctgggcacc aactctctgg tccgcatcgc cgcgatcccg gatgcgcgca
     2221 aggtcgatct gacccgcgtg caatggttcc agctctacga ggcggcgctt ggccgcgagg
     2281 tggcgtgatg cacatggccg aaccccgcag tttcgttccc gaaccccaga a
//
LOCUS       DTVW01000475            1684 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1581801, whole
            genome shotgun sequence.
ACCESSION   DTVW01000475 DTVW01000000
VERSION     DTVW01000475.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1684)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1684)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1684
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1581801"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     regulatory      <1..143
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00174"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="cobalamin riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="adenosylcobalamin"
                     /db_xref="RFAM:RF00174"
     gene            258..1490
                     /locus_tag="EYO87_06330"
     CDS             258..1490
                     /locus_tag="EYO87_06330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010140323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic ring-hydroxylating dioxygenase subunit
                     alpha"
                     /protein_id="HIC65603.1"
                     /translation="MTAEAKARDLLNRREPNHSLERAFYTDADLHAIDLEQIFYRDWL
                     YAAPSCALPKAGSYVTHQVGAYRLMIVRGADRVIRAFHNTCRHRGSIICKGASGHVPK
                     LVCPYHQWTYELDGRLIWARDMGPDFDATKHGLKAIHCREVSGLVYLCLAEEAPDFDA
                     FAAMAQPYLASHDLDQAKIAHQSTIIENGNWKLVWENNRECYHCGGNHPALCRTFPDD
                     PVISGIEEGGPPPHLQAHFRRCEAAGMPAQFRIAESGQYRFARMPLKVGAKSYTMTGD
                     PAVRRRLGRVPFDDAGALLKFHYPTTWNHFLPDHSITFRVTPLGPQQTEVQTTWLVDK
                     DAVEGVDYDLKTLTEVWVATNDEDRRVVEDNQLGINSPAYRPGPYSAVQEGGVIQFVD
                     WYCETLGNRIQPVRVAAE"
     gene            1493..1642
                     /locus_tag="EYO87_06335"
                     /pseudo
     CDS             1493..1642
                     /locus_tag="EYO87_06335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018236283.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hybrid-cluster NAD(P)-dependent oxidoreductase"
BASE COUNT          329 a          543 c          529 g          283 t
ORIGIN      
        1 gaaaatccgg aactgccccc gcaacggtaa ggagcgaacg gccacgacaa gagccactgg
       61 agtcaagcct ccgggaaggc gtcgggtcgg cggcatggcc gaagccccaa gtccggaaac
      121 cagccagaca tgacgtcaaa ccgcgggcgg cggcagaggc gatcctgcgt cgcgccatct
      181 catcggcgcg gggccgatcc cgtctgccgc gcccctcagc atatcgccgg agatgtccgg
      241 caacggagaa agaggccatg accgcagagg ccaaagcacg cgacctgctg aaccggcgcg
      301 aaccgaatca ttcgctggaa cgggcgttct atacggatgc cgatcttcat gcgatcgatc
      361 tggaacagat tttctatcgc gactggttgt atgccgcacc gtcctgcgcg ctacccaagg
      421 cgggaagcta tgtcacccat caggtcggcg cctaccggct gatgatcgtg cgcggcgcgg
      481 acagggtgat ccgggcgttc cacaatacct gccggcatcg cggctcgatc atctgcaagg
      541 gcgcttcggg ccacgtgccg aaactggtct gcccctatca tcaatggacc tacgaactgg
      601 acggccgcct gatctgggcg cgggacatgg ggccggattt cgatgccacg aaacacgggt
      661 tgaaggcgat ccattgccgc gaagtgtcgg ggctggtcta tctgtgcctg gccgaggagg
      721 ccccggattt cgacgccttc gccgccatgg cccagcccta tctggcgtcg cacgatctgg
      781 atcaggccaa gatcgcccat caatcgacca tcatcgagaa cggcaactgg aagctggtct
      841 gggaaaacaa ccgcgaatgt tatcattgcg gcggcaacca cccggccctg tgccgcacct
      901 tccccgacga tccggtgatc agcggaatcg aggaaggcgg ccccccgccc catcttcagg
      961 cgcatttccg gcgttgcgag gcggccggaa tgcccgcgca gttccgcatc gcggagagcg
     1021 gacaataccg ctttgcccgg atgccgctga aggtcggggc aaaaagctat accatgaccg
     1081 gcgatccggc cgtgagacgc cggctgggtc gggtgccctt cgacgacgcg ggcgcgctgc
     1141 tgaaattcca ctatccgacg acgtggaacc atttcctgcc cgatcactcg atcacattcc
     1201 gggtgacccc gctcggtccg cagcagaccg aggtccagac gacctggctg gtcgacaagg
     1261 acgccgtcga gggcgttgat tacgacctga agaccctgac cgaggtctgg gtggccacca
     1321 atgacgagga tcgccgcgtg gtcgaggaca accagcttgg catcaattcg cccgcctatc
     1381 gccccggacc ctattccgcg gtgcaggagg gcggcgtgat ccagttcgtg gactggtatt
     1441 gcgagacgct gggcaatcgt atccagccgg tgcgggtggc cgccgaatga gaatgccgca
     1501 gcccgaaatc tcgcatccgg tgctggtctg ggacggggcc gagatgcttg aatgcgtcac
     1561 cgtcacaccc gaggcgccca acgtggccag cttctgtttc cagtcgccga cgggtgcgat
     1621 cttttccttc gtgccgggcc agagtcctcc tcaaggcacc aactaagccg tactttgacc
     1681 gata
//
LOCUS       DTVW01000476            2881 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1582283, whole
            genome shotgun sequence.
ACCESSION   DTVW01000476 DTVW01000000
VERSION     DTVW01000476.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2881)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2881)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2881
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1582283"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1337
                     /locus_tag="EYO87_06340"
     CDS             <1..1337
                     /locus_tag="EYO87_06340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HIC65604.1"
                     /translation="AMGKKIAAEMAKERPKFIKGSIENGVPEKKAGEVFDLLEKFANY
                     GFNKSHAAAYAVVSYQTAWLKANHPVEFMAAVMNCDIHLTDKLAIYKRECDRMGIAIL
                     APCVNRSAPKFTVGEGRIHYALGALKGVGIEAMRLVHEARGDRPFADIHDFARRVDMK
                     RVGKRPLEMLARAGAFDALDDNRARVLKSLDSLVAWSAAVQEQAASSQSSLFGGGEDL
                     PPPRAAIEQVWLPTEKLGEEHRAIGFYLSGHPLDDYLPALKRKNVMTLAQISAEAAGG
                     PMVASIAGTVAARMERKSAKGTPYAFVSLSDPTGLYEVTVFSDLLNASRDRLEPGENV
                     VLQVKVEPSGEQVKMLANSVTRLEDAVADAGAGSLAVEMQGADAIPRLAEVLGRIRTE
                     IVVSARSRGPILLRLREGDELIEIEVADDAPLTTPARQALRAVPGVLEVSEE"
     gene            complement(1350..1766)
                     /locus_tag="EYO87_06345"
     CDS             complement(1350..1766)
                     /locus_tag="EYO87_06345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008560521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter subunit G"
                     /protein_id="HIC65605.1"
                     /translation="MDLAGEILISAMLVIGGAFGLVGSYGLVKLPDQMTRLHAPTKAA
                     TLGVGGIMIASLLWFGFFGERASWHEFLIVLFLFLTAPITGLMIAKTNMHLTWRPDEL
                     PYPGEDMHWATFGDSADRSLMDGDADLDNTERDLRE"
     gene            complement(1780..2049)
                     /locus_tag="EYO87_06350"
     CDS             complement(1780..2049)
                     /locus_tag="EYO87_06350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010393744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="K+/H+ antiporter subunit F"
                     /protein_id="HIC65606.1"
                     /translation="MILYALYFAFACFGIGQLFCLYRVVFAPGVGDRVLALDTMAINM
                     IALTALFGILHDTTMYFEIMLLFAMVGFISTVAYAKFLLRGDLIE"
     gene            complement(2046..2537)
                     /locus_tag="EYO87_06355"
     CDS             complement(2046..2537)
                     /locus_tag="EYO87_06355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011747045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter subunit E"
                     /protein_id="HIC65607.1"
                     /translation="MIRRLFPHPYLSAMLVIVWMLLVNRFAWGSLVFAVILSIAIPAL
                     TEPYWPARARLRHPGKILVYVTIVVHDIIRANIDVALIVLFKPNRNLQPAWITIPLEL
                     RSPEAITVLASTITLTPGTVSSDLSQNGHALLVHCLHAPEPQEVIDEIKTRYEARLKE
                     IFE"
BASE COUNT          563 a          877 c          955 g          486 t
ORIGIN      
        1 gcgccatggg caagaagatc gccgccgaaa tggccaagga acgtccgaaa ttcatcaagg
       61 gcagcatcga gaacggcgtg cccgaaaaga aggccggcga agttttcgac ctgctcgaga
      121 agttcgccaa ttacggcttc aacaaatcac acgcggccgc ctatgccgtg gtcagctatc
      181 agaccgcctg gctgaaggcg aaccatccgg tcgaattcat ggccgcggtg atgaactgcg
      241 acatccacct gaccgacaag ctggccatct acaaacgcga atgcgaccgg atgggaatcg
      301 cgatcttggc cccctgcgtc aaccgctcgg caccgaaatt caccgtgggc gaaggccgca
      361 tccattatgc gcttggggcg ttgaagggcg tcggcatcga ggcgatgcga ctggtccacg
      421 aggcgcgcgg cgacagaccc tttgccgata tccatgattt tgcccgccgc gtggacatga
      481 agcgcgtggg caagcgcccg ctggagatgc tggcccgcgc cggcgcgttc gatgcgctgg
      541 acgataaccg cgcgagggtc ctgaaatctc tggacagcct ggtcgcgtgg tcggcggcgg
      601 ttcaggaaca ggcggcgtcc agccaatcct cgctgttcgg cggcggcgag gatctgccgc
      661 cgccgcgtgc ggcgatcgag caggtctggc tgccgaccga gaagctgggc gaggaacatc
      721 gcgccatcgg cttttacctg tccgggcatc cgctggacga ttacctgccc gcgctgaagc
      781 gcaagaacgt gatgacgctg gcccagatca gcgccgaggc ggcaggcggc ccgatggtgg
      841 ccagcatcgc cggcaccgtg gccgcgcgga tggaacgcaa gtcggccaag ggcacgccct
      901 acgcctttgt cagcctgtcc gatccgaccg ggctttacga ggtgacggtg ttctcggacc
      961 tgctgaacgc ctcgcgcgat cggctggaac cgggcgagaa tgtcgtgttg caggtcaagg
     1021 tcgaaccctc gggcgagcag gtcaagatgc tggccaattc cgtcacccgg ctggaggacg
     1081 cggtggccga tgcaggcgcc ggcagccttg cggtcgagat gcagggcgcc gacgcgattc
     1141 cgcgcctggc cgaggttctg ggtcggatcc gcactgaaat cgtggtttcg gcgcgatctc
     1201 gcgggccgat tctgctgcgt ctgcgcgaag gcgatgaact gatcgagatc gaggtggccg
     1261 atgatgcgcc tctgaccacg cccgcgcggc aggcgttgcg cgccgtgccg ggggtgctgg
     1321 aggtcagcga ggaatagggc gagcgcggcc tattctctca ggtcgcgttc ggtgttgtcc
     1381 agatcggcgt cgccgtccat caggctgcga tcggcggaat cgccgaaggt ggcccagtgc
     1441 atgtcctcgc ccggataggg caactcatcg gggcgccagg tcaggtgcat gttggtcttg
     1501 gcgatcatca gcccggttat cggcgcggtc aggaacagaa acagcacgat caggaattcg
     1561 tgccagctgg cacgttcgcc gaaaaagccg aaccagagca gcgatgcgat catgatgcca
     1621 cccacgccaa gcgttgcggc cttggtcggt gcatgaagcc gggtcatctg atcgggcagc
     1681 ttcaccagcc cgtaggatcc cacaagaccg aaagcaccgc cgatgaccag catcgccgag
     1741 atcaggatct ctccagcaag gtccatcgca ttttcccttt cattcgatca ggtcgccgcg
     1801 cagcaggaat tttgcatagg ccacggtcga gatgaagccg accatggcga acagcagcat
     1861 gatctcgaaa tacatcgtcg tgtcgtgcag gatgccgaac agggcggtca gcgcgatcat
     1921 gttgatcgcc atcgtgtcca gcgccagaac ccgatcgccg actccgggcg cgaaaacaac
     1981 gcggtagagg cagaacaact ggccgatgcc gaaacaggcg aaggcgaaat aaagcgcgta
     2041 gaggatcatt cgaagatctc cttcaggcgg gcttcgtagc gcgtcttgat ctcgtcgatc
     2101 acctcttgcg gttcgggagc gtgcaggcaa tggaccagca gcgcatggcc gttctgcgac
     2161 aggtccgaac tgaccgtccc cggtgtcagc gtgatggtgc tggccagaac cgtgatcgcc
     2221 tcgggcgatc gcaactccag cgggatggtg atccaggcgg gttgcaggtt gcggttgggc
     2281 ttgaacagca cgatcagcgc cacatcgata ttggccctga tgatatcgtg gacgacaatc
     2341 gtgacataga cgaggatctt gcccggatgg cgcagccggg cacgggcggg ccagtagggt
     2401 tcggtcagcg ccgggatcgc gatgctgagg atcaccgcaa agaccagcga accccaggcg
     2461 aaccggttga ccagcaacat ccagacgatg accagcatcg ccgaaagata gggatgagga
     2521 aacaggcgcc ggatcatttc gcaccctcct gctggcgcag caccgattcg tagtagagcg
     2581 tcgggttggt cagttgatcg gccgtccgtt gcagataatc ggtcagcggc ccggcgaaga
     2641 cggtcagcac caccataccg gccagcagcg cgccggtcgc ggtgaaggac agccatggcg
     2701 ctgccgaatc gccgacatcc tggatcggtt cgtcggtttc cagcttcgtc gggatcggtc
     2761 cgggcgcggg gcgctgacct tcgtcgctgt cgttgcccgg ctcggggtcc atctcgtgcg
     2821 acttccagaa caggatcgag cctgcccgcc caaagcccac cagcgcgatc gcgacccccg
     2881 c
//
LOCUS       DTVW01000477            1265 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1582441, whole
            genome shotgun sequence.
ACCESSION   DTVW01000477 DTVW01000000
VERSION     DTVW01000477.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1265)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1265)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1265
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1582441"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..142
                     /locus_tag="EYO87_06360"
     CDS             <1..142
                     /locus_tag="EYO87_06360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010393850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HIC65608.1"
                     /translation="GGIIGKVASIRDDDLEVEIAPGVKVRVVRSTISQVLGKTEPVAA
                     NK"
     gene            172..>1265
                     /locus_tag="EYO87_06365"
     CDS             172..>1265
                     /locus_tag="EYO87_06365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011747735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecD"
                     /protein_id="HIC65609.1"
                     /translation="MLQIDRWKRILIIGICLLGLAYAMPNLFYKRVEAHNDAITTIEK
                     TGASTPELDAARAGWPGWLPSGLVNLGLDLRGGAYLLGEVEVAQVYKARMDALWPELR
                     RALADERATIGAVRRLDSPDGTLKVSIGNPDQMARATEIARGFSDPVTTISGAGQQSL
                     AITAEGGAMTIRLSDAEKAVTDDRTIQQSLEIIRRRVDEVGTREPTITRQGEDRILIQ
                     VPGIGSAAELKALIGTTAKLTFNSVVATGGNADAPTDPGQIVLPDAEREGVYYTLEES
                     PVVTGEELNDALPSTDQNGLPSVDFRFNPGGARKFGAYTSANVGQPFAIVLDNQVISA
                     PVIRQPITTGSGQISGSMNFDEANRLKKEL"
BASE COUNT          242 a          417 c          411 g          195 t
ORIGIN      
        1 gggcggcatc atcggcaagg tcgccagcat ccgcgacgac gatctggaag tcgagatcgc
       61 cccgggcgtg aaggtgcgcg tggtccgctc gaccatctcg caggtgctgg gcaagaccga
      121 accggtcgcc gcaaacaaat gatccgccag acgcgaaagg cgtaagccgc aatgcttcag
      181 atcgaccgat ggaagcgcat cctgatcatc gggatctgcc ttctgggact ggcctatgcc
      241 atgcccaacc tgttctacaa gcgcgtcgag gcccataacg acgccatcac caccatcgag
      301 aagaccggtg ccagcactcc ggaactggat gcggcccgcg ccggctggcc gggctggctg
      361 cccagcgggc tggtcaatct ggggctcgat ctgcgcggcg gtgcgtatct tctgggcgag
      421 gtcgaggtgg cccaggtcta caaggcccgc atggacgcgc tgtggcccga actgcgccgc
      481 gcgctggccg acgagcgcgc caccatcggc gcggttcgcc gcctggattc gcccgatggc
      541 acgctgaagg tctcgatcgg aaatcccgac cagatggccc gcgcgacaga gatcgcgcgc
      601 ggcttttccg atccggtcac cacgatcagc ggcgccgggc agcaaagcct tgccatcacc
      661 gccgagggcg gcgcgatgac gatccggttg tcggatgccg aaaaggccgt caccgatgac
      721 cgcacgatcc agcaatcgct ggaaatcatc cgccgccgcg tcgatgaggt cggcacccgc
      781 gaacccacca tcacccgaca gggcgaggat cggatcctga tccaggtgcc gggcatcggc
      841 tcggcggcgg aactgaaggc gctaatcggg accacggcga aactgacctt caattcggtc
      901 gtggcgacag gcggcaatgc tgacgcgccg accgatccgg ggcagatcgt gctgccggat
      961 gccgaacgcg agggtgtcta ttacacgctc gaggaaagcc ccgtcgtgac cggtgaagag
     1021 ttgaacgacg ccctgccctc gaccgaccag aacgggctgc cctcggtcga tttccgcttc
     1081 aaccccggtg gcgcgcgcaa gttcggcgcc tataccagcg ccaatgtcgg ccagcccttc
     1141 gccatcgttc tggacaatca ggtgatctcg gccccggtga tccggcagcc gatcactacc
     1201 ggttcggggc agatttccgg gtcgatgaat ttcgacgagg cgaaccgcct gaagaaagag
     1261 ctgga
//
LOCUS       DTVW01000478            1792 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1583398, whole
            genome shotgun sequence.
ACCESSION   DTVW01000478 DTVW01000000
VERSION     DTVW01000478.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1792)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1792)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1792
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1583398"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            456..>1792
                     /locus_tag="EYO87_06370"
     CDS             456..>1792
                     /locus_tag="EYO87_06370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011746881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrkH family potassium uptake protein"
                     /protein_id="HIC65610.1"
                     /translation="MIDLRPVAHPIGKILIVLGAGMTLPMALDWWDGNPNWTIFLQCS
                     LLTMVAGLLTMVATGGEERSLTIQQAFLVTSGLWAVLPIFGALPFILGQPEASLTDAY
                     FEAMSGVTTTGTTAFPALDDLPRGVHLWRGILHWSGGLGIVVVAMVFLPVMKIGGMQF
                     FRSEGFDTLGKILPRAGQIAAEMTRLYLFLTAACIVTYLLLGMTGFDAVMHAFSTVST
                     GGFSNYDASFGRYLGAPEWAASVFMILASIPFIRMVQAMRGNFVPLWRDVQIRAYLRW
                     IFYACAIIVVYRLLYVQQDARPAEVIRETVFNTISTFSGTGFSSTDITQWGHLPFAIL
                     IVCGLIGGCTGSTGCSVKVFRYLVLFEAVRVQVRRMHSPHRIYALRYEGRPLDKDVVD
                     SVMAFFTLFMLSFGLLIVGLSLTGLHPKTALTAAWTAIANVGPAWGPEVSENGS"
BASE COUNT          246 a          609 c          596 g          341 t
ORIGIN      
        1 ccacgacgcg cccggtggcc agcccggcca gcgcccaggc cagcagcgcg gcctgcggca
       61 gccacagcgc ctctgccagt gtgctcaggg atgcggacag acgcagggcg cgttgctgcg
      121 aagccgccat gcggaccagt tcggcgggga taggggcagg ttcgcgagcc ataccgccgg
      181 tctcgcgcgg acggggcggg ccgtcaatgc gccgctgcgt cgcggcgacg gcgctgccgg
      241 cgacgggccg tcacgcgcaa cacgcgcctg acgcccagcg gcagcgaccg gaccgggcct
      301 gcccggtccg cccccccttt ttttgcccct ccgccgcggc gtccggcctc gccaaccggc
      361 ttgggccgcg cagccgggcc acaggtcccg cgccccgtgg cacagggcat ggatgcgcgc
      421 ttgacgcctg acggggcgcg cggcaagcag gcggaatgat cgaccttcgc cccgtggccc
      481 atcccatcgg aaagatcctg atcgtgctgg gcgcgggcat gaccctgcca atggcgttgg
      541 attggtggga cggcaatccg aactggacca tctttctgca atgcagcctg ctgaccatgg
      601 tcgcgggtct gctgacgatg gtggccaccg gaggcgagga acgctcgctc accatccagc
      661 aggcgttcct ggtcacctcc gggctgtggg cggtcctgcc gatcttcggc gcgcttccct
      721 tcatcctggg tcagcccgag gccagcctga ccgacgccta tttcgaagcc atgtccggcg
      781 tcaccaccac cgggacaacg gcgtttccgg cgctggatga cctgcccagg ggcgtgcatc
      841 tgtggcgcgg catcctgcac tggagcggcg ggctggggat cgtggtggtg gcgatggtct
      901 ttctgcctgt gatgaagatc ggcggcatgc agttcttccg ctcggaaggg ttcgacaccc
      961 tgggcaagat cctgccccgc gccggacaga tcgcggccga gatgacccgg ctctacctgt
     1021 ttctcaccgc cgcctgcatc gtcacctacc tgttgctggg catgaccgga ttcgatgcgg
     1081 tgatgcacgc tttcagcacc gtttcgaccg gcggattctc caactacgat gccagtttcg
     1141 gccgctatct gggcgcgccg gaatgggcgg cgtcggtgtt catgatcctg gcctcgatcc
     1201 ccttcatccg catggtgcag gcgatgcgcg gaaatttcgt gcccttgtgg cgcgatgtcc
     1261 agatccgcgc ctatctgcgc tggatcttct atgcctgcgc gatcatcgtc gtctatcgtc
     1321 tgctttacgt tcagcaggac gcgcgcccgg ccgaggtcat ccgcgagacc gtcttcaaca
     1381 cgatctcgac cttttcgggg acgggatttt cctcgaccga catcacccag tgggggcacc
     1441 tgcccttcgc gatcctgatc gtctgcgggc tgatcggcgg ctgtaccggc tcgaccggct
     1501 gttcggtcaa ggttttccgc tatctggtcc tgttcgaggc cgtgcgcgtg caggtccgcc
     1561 ggatgcattc gccgcaccgc atctatgccc tgcgctacga gggccggccg ctggacaagg
     1621 atgtggtcga ttcggtcatg gccttcttca cgcttttcat gctgtccttc ggtctgctga
     1681 tcgtcggact gtcgctgacg ggtctgcatc cgaagacggc gctgaccgcg gcctggacgg
     1741 cgatcgccaa tgtcggcccg gcctgggggc cggaggtgtc ggaaaacggc tc
//
LOCUS       DTVW01000479            1386 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1583944, whole
            genome shotgun sequence.
ACCESSION   DTVW01000479 DTVW01000000
VERSION     DTVW01000479.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1386)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1386)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1386
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1583944"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1211)
                     /locus_tag="EYO87_06375"
     CDS             complement(<1..1211)
                     /locus_tag="EYO87_06375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase"
                     /protein_id="HIC65611.1"
                     /translation="MTDFTMEKGADGVAIVTWDVPGKSMNVLSMDGAAELDALIDEAL
                     ADEAVKGIVITSGKQDFAAGMDLNVIAGMKEQGGAQGVFDGVMKLHHLLRKIERAGMD
                     PKSLKGGKPIAAALPGTALGIGLELPLATHRIFAADNARAKIGLPEIMVGIFPGGGGT
                     TRLARRLGAMAAAPFLLEGKLCDPGKAQAAGLIDEVVDDPVAAAKDWVLRASDADLVK
                     PWDQKGYKMPGGEPFHPAGFMTFVGASAMVHGRTMGVYPAARALLSAVYEGAMVPFDQ
                     ALRIEARWFTNVLMNPSSGAMIRSLFINKEALEKGANRPDQPDQKVAKVGILGAGMMG
                     AGIAHVSAMAGIEVVLIDAKQDAADRGKSYSEGLLDKAISRKKATEEKKSEVLARINA
                     TTDYAALDGCDL"
     gene            complement(1223..>1386)
                     /locus_tag="EYO87_06380"
     CDS             complement(1223..>1386)
                     /locus_tag="EYO87_06380"
                     /EC_number="2.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008884307.1"
                     /note="Catalyzes the synthesis of acetoacetyl coenzyme A
                     from two molecules of acetyl coenzyme A. It can also act
                     as a thiolase, catalyzing the reverse reaction and
                     generating two-carbon units from the four-carbon product
                     of fatty acid oxidation; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="acetyl-CoA C-acyltransferase"
                     /protein_id="HIC65612.1"
                     /translation="NGGAIAMGHPLGATGAIIIGTLLDELERQDKTLGLATLCIASGM
                     GAATIIERV"
BASE COUNT          208 a          485 c          428 g          265 t
ORIGIN      
        1 aggtcgcagc cgtccagcgc cgcgtaatcc gtggtggcgt tgatccgggc cagcacctcg
       61 gacttcttct cctcggtcgc cttcttgcgg ctgatcgcct tgtccagcag cccctcggaa
      121 taggatttgc ccctgtcggc ggcgtcctgt ttcgcgtcga tgaggacgac ctcgatcccg
      181 gccatggcgc tgacatgggc gatgcccgcg cccatcatgc cggcgccgag aatgccgacc
      241 ttcgcgacct tctgatcggg ctgatcggga cggttcgcac ccttttccag tgcttccttg
      301 ttgatgaaca ggctgcggat catggcgccg ctgctgggat tcatcagcac gttcgtaaac
      361 cagcgcgcct cgattcgcag tgcctggtca aagggcacca ttgccccctc atagaccgcc
      421 gacaacaacg ccctggcggc cggatagacc cccatggtcc tgccatgcac catggccgag
      481 gcgccgacga aggtcatgaa gccggccggg tggaacggct cgccgccggg catcttgtaa
      541 cccttctggt cccagggctt gaccagatct gcgtcgctgg cacgcagaac ccagtccttc
      601 gcggcggcaa cggggtcgtc caccacctcg tcgatcaggc cggcggcctg ggctttcccg
      661 ggatcgcaaa gcttgccttc cagcaggaag ggcgcggcgg ccatcgcccc cagcctgcgc
      721 gccagccggg tcgtgccgcc accgccggga aagatgccga ccatgatctc gggcaggccg
      781 atcttggcgc gggcgttgtc ggccgcgaag atgcgatggg ttgccagcgg cagttccaac
      841 ccgattccaa gtgccgtgcc gggcagggcg gcggcgatgg gtttgccgcc cttgagcgac
      901 ttcggatcca tgcccgcccg ttcgatcttg cgcagcaggt gatgcagttt catcaccccg
      961 tcaaagacgc cctgcgcgcc gccctgttcc ttcatcccgg cgatgacgtt cagatccatc
     1021 ccggccgcga aatcctgctt gcccgaggtg atgacgatgc ccttgacggc ctcgtccgcc
     1081 agcgcctcgt cgatcagcgc gtccagttcc gccgcgccgt ccatcgacag cacgttcatc
     1141 gactttccgg gcacgtccca ggtaacgatt gcgacgccgt cggcgccttt ctccatggtg
     1201 aaatcggtca tgtccttcgc cctcacacgc gctcgatgat ggtggccgcg cccatgccgg
     1261 acgcgatgca cagggttgcc agacccaggg tcttgtcctg tcgttccagt tcgtccagaa
     1321 gggtgccgat gatgatcgct ccggtcgcgc ccagcgggtg gcccatggca atggcgccgc
     1381 cgttga
//
LOCUS       DTVW01000480            1506 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1584991, whole
            genome shotgun sequence.
ACCESSION   DTVW01000480 DTVW01000000
VERSION     DTVW01000480.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1506)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1506)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1506
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1584991"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            89..1140
                     /locus_tag="EYO87_06385"
                     /pseudo
     CDS             89..1140
                     /locus_tag="EYO87_06385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003522558.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
     gene            1166..>1506
                     /locus_tag="EYO87_06390"
     CDS             1166..>1506
                     /locus_tag="EYO87_06390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006724919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyisobutyrate dehydrogenase"
                     /protein_id="HIC65613.1"
                     /translation="MAKTIAFIGLGNMGGPMAGNLVKAGHDVRGFDLSEAARTAAAAR
                     GVKACDDLTDAVTGADAVITMLPNGALVKKVWGQIAFTVARGTVLIDSSTIDVDSAIA
                     AHKMLTDQGCLT"
BASE COUNT          282 a          471 c          494 g          259 t
ORIGIN      
        1 gcgcgtgcac cagatccttg agggcacgaa tgaaatcatg cggctgatcg tgtcacggtc
       61 ggtgatcgca cagagctgag accgacccat gagcgaagcc cccgtcatcg tcagccgcga
      121 aggcagcctt ggccgattgc cctgaaccgc cccaaggcga tcaacagcct gacgctggag
      181 atggtgcgga tgctggatca gggcctcggc acgttcgagg ctgacgatgc cgtcgcgtcg
      241 gtgctgatca ccggggcggg cgaacgtggc ctttgcgcgg ggggcgatgt catcgcgctc
      301 tataattcgg gcaaggcagg tgatggcgag gccgcccgtt tttgggccga ggaatacagg
      361 ctgaacgccc gtatcgccgc ctatcccaaa ccctatgtcg ccgtcatgaa cggcatcacc
      421 atgggcggcg gcgtgggtgt gtcggcgcat ggcagccacc gcatcgcgac agaccggacg
      481 cggatggcca tgccggaaac cggtatcggt ctgtttccgg acgtcggcgg cacctggatt
      541 ctgggcaagg cagccggaga gatcggcacc tatgtcggcc tgaccggcgc cagcttcggc
      601 gcggcggacg cgatctatgt gggcttttcc gattaccata tgccggcgga acgggttgac
      661 gccttgatcg cggcgcttgc cgccctgccc gccggggcgg acggcgcggc cgtcacgcgg
      721 gcggtcgagg tgctgaccac ccccgccccg ccctcggcca tcgccgaaaa ccgcccttcg
      781 atcgacgccg ccttcgcggc caattctgtc gaagggataa tcgatgcatt aatggcggag
      841 ggaaccgact tcgcccaggc aacgctgaag acgctgtccc agaaatcgcc gaccagcctc
      901 aagctcgctc tggcgctact gcgggcagcc cgcaagagca gcggtctgga ggaatgtctg
      961 gatcgtgaat acgcggccat cacaggtgtc ctgaccgggc ccgacttcta tgaaggggta
     1021 cgtgccgtgg ttatcgacaa ggaccgcaat ccgaaatggc tgcctgccac gcttgccgaa
     1081 gtccaggacc cggatatcga tgccatgacc gctgcgcaga catcattatt caatcgctga
     1141 tattttctta aagggaggga cttagatggc caagactatc gcattcatcg gcttgggtaa
     1201 catgggcgga ccaatggccg gaaacctggt taaggccggg cacgatgtgc gcggcttcga
     1261 cctgtcagaa gcggcccgca cggctgccgc cgcccgcggc gtgaaggcat gcgacgacct
     1321 gacggacgcg gttacaggtg ccgatgcggt catcaccatg ctgccgaacg gcgccctggt
     1381 gaagaaggtc tggggccaga tcgcctttac tgtcgctcgc ggcaccgtgc tgatcgacag
     1441 ctccaccatt gacgtggaca gcgccatcgc cgcgcacaag atgctgaccg accagggctg
     1501 cctgac
//
LOCUS       DTVW01000481            1387 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1585524, whole
            genome shotgun sequence.
ACCESSION   DTVW01000481 DTVW01000000
VERSION     DTVW01000481.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1387)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1387)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1387
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1585524"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..567)
                     /locus_tag="EYO87_06395"
     CDS             complement(<1..567)
                     /locus_tag="EYO87_06395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009211178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome B"
                     /protein_id="HIC65614.1"
                     /translation="MLAGGVVIWVIVVGVSFYAVKVRPGRHSERTGLRLIIWGGCVFP
                     TVVLAALLVWGLGLLNDLRRPGDGPTIAVSGERFWWRVSYGVTGAPGVLRSLPRGGIP
                     GANEIVIPLGQRSTILLGSPDVIHSFWVPPLAGKMDAIPGRVNRLILEPTETGIFNGT
                     CAEFCGLAHAQMGFRVIVVPPAEFEAYVQ"
     gene            complement(687..>1387)
                     /locus_tag="EYO87_06400"
     CDS             complement(687..>1387)
                     /locus_tag="EYO87_06400"
                     /inference="COORDINATES: protein motif:HMM:PF09678.8"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="cytochrome c oxidase assembly protein"
                     /protein_id="HIC65615.1"
                     /translation="AGGIAALVAALVWPLDAWGESLFSAHMAQHITLMGLAAPLLVLG
                     QPLATMTRALPRAWQRRLAALAGTAIWRRGHDLLTSTGVATALMLGVFLFWHAPPALA
                     VALDDDLVHAVMHGSIFAAALAFWTMIARVRDRGFGVRIVALFVCFKFSLILGALLTF
                     SGRALYPVYGSRPDAWGLTPVEDQQLAGVLMMTAAAMMYLVAALVVAAAWFASMDRTQ
                     AACNTVAAANGAGS"
BASE COUNT          274 a          501 c          452 g          160 t
ORIGIN      
        1 ctgcacatag gcctcgaact cggcgggcgg cacgacgatc acccggaatc ccatctgggc
       61 atgggccagc ccgcagaatt cggcgcaggt gccgttgaag attccggtct cggtcggctc
      121 caggatcaga cggttcaccc ggccgggaat cgcgtccatc ttgccggcca gcggcggcac
      181 ccagaaggaa tggatcacgt cgggactgcc cagcaggatc gtgctgcgct ggcccagcgg
      241 aatgacgatc tcgttggcgc cggggatgcc gccgcgcggc aggctgcgca gcacgcccgg
      301 cgcgcccgtc acgccgtagg agacgcgcca ccagaaccgt tcgcccgaaa ccgcgatggt
      361 cggaccgtcg cccggacggc gcaggtcgtt cagcagcccg aggccccaga ccagcagcgc
      421 cgccagcacg acggtcggaa acacgcagcc gccccagatg atcagccgca ggccggtcct
      481 ttcgctgtgc cgcccgggcc gcaccttgac cgcgtagaag ctgacgccga cgacgatgac
      541 ccagatcacc acgcctccgg ccagcatggc ccagaacagc gcaaggacgc gcgcggcctc
      601 gtccccggcg ggatcgaagg cggattgcgg attctcgcag cccgccaggg ccagcgccgc
      661 aagcaggaat gccagccccg ccgtcctcaa gatcctgccc cgttcgctgc cgcgaccgtg
      721 ttgcaggcag cctgtgtccg atccatcgaa gcaaaccagg cggccgcgac gacgagtgcg
      781 gcgaccagat acatcatcgc cgccgccgtc atcatcagca cgccggcaag ttgctgatcc
      841 tcgaccggcg tcaatcccca ggcgtctggc cgggacccat agacgggata aagcgcccgg
      901 cccgaaaagg tcagcagcgc ccccaggatc agcgaaaact tgaagcagac gaaaagcgcg
      961 acgatccgca ccccgaagcc cctgtcgcgg acccgggcga tcatggtcca gaacgccaga
     1021 gcggcggcaa agatcgagcc gtgcatcacc gcgtggacaa gatcatcgtc aagcgccacg
     1081 gccagcgcgg gcggtgcgtg ccagaacagg aaaacgccca gcatcagggc ggtggcgacg
     1141 cccgtagagg tcagaagatc gtggccacgt cgccagatcg cggtcccggc cagcgcggca
     1201 aggcgccttt gccaggcgcg cggcagggcg cgcgtcatcg tcgcaagcgg ctgtcccagc
     1261 accagaagcg gcgccgccag ccccatcagc gtgatatgct gcgccatatg cgcggaaaac
     1321 aggctttcac cccaggcatc gagcggccag acaagggccg cgaccagcgc cgcgatgccg
     1381 ccggcaa
//
LOCUS       DTVW01000482            2512 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1586114, whole
            genome shotgun sequence.
ACCESSION   DTVW01000482 DTVW01000000
VERSION     DTVW01000482.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2512)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2512)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2512
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1586114"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..181
                     /locus_tag="EYO87_06405"
     CDS             <1..181
                     /locus_tag="EYO87_06405"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007204605.1"
                     /note="catalyzes the synthesis of xanthosine monophosphate
                     by the NAD+ dependent oxidation of inosine monophosphate;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HIC65616.1"
                     /translation="TVIHQLVGGLRAAMGYTGCATIEEMRRNCQFVRITGAGLKESHV
                     HDVQITRESPNYRLG"
     gene            527..1516
                     /locus_tag="EYO87_06410"
     CDS             527..1516
                     /locus_tag="EYO87_06410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019297982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HIC65617.1"
                     /translation="MIFKASRMIAAAALLGASSLGAMAQDFNPTNPECIAPANPGGGW
                     DFTCRQVGKTMQDLGLIDTTMQVVNLAGGGGGVAFAEVVNKREDDNNLIVAASSATAT
                     RLAQGAYPGNTMDQVRWLGSIGADYGVIAVAADSEIKTLPELLDKIKADPGSISVAGG
                     SAVGGWDHLKVLIAADAYGIEDVRSVKYIAFDGGGEAVTQLLAGSVQAFTGDLSEAKG
                     FVDSGDIRVIAVLAPERLDGEFADFPTAKEQGVDAVGANWRGFYGPGGMSDEAYNGWV
                     SKLGELYASDEWKEVMKVNGIAPLDLQGEEFQQFVSESVTRIQDISRKIGIIK"
     gene            1595..2026
                     /locus_tag="EYO87_06415"
     CDS             1595..2026
                     /locus_tag="EYO87_06415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005862074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter TctB
                     family protein"
                     /protein_id="HIC65618.1"
                     /translation="MSDRILGLVGILLAIGFALAALSIEESFLSDAVGPKAFPLIIAA
                     VLGLASIVIALRPDPDPTWPALGRLAEIGAAVLVMILYAKLLPEAGFVIATAFAATYL
                     SWRLGSTILWATATGIGTSLGIYVIFNLALGLSLARGPFGF"
     gene            2038..>2512
                     /locus_tag="EYO87_06420"
     CDS             2038..>2512
                     /locus_tag="EYO87_06420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005979720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HIC65619.1"
                     /translation="METLSNLADGFAIALTWQNLSLALLGCFLGTIMGALPGLGPSNG
                     VAILIPLAFTLGLGATPSLILLTSVYYGAMYGGRISSILLNIPGDEPAMMTCLDGHPM
                     ARKGLAGEALSLSGIASFVGSFIATWGLIVLAPQLVKIALLFGPAEYFALFALAFM"
BASE COUNT          413 a          776 c          840 g          483 t
ORIGIN      
        1 cacggtgatc caccagcttg tcggcgggct gcgcgccgcc atgggctata ccggctgcgc
       61 cacgatcgag gagatgcgcc gcaactgcca gttcgtccgc atcaccgggg cggggctcaa
      121 ggaaagccat gtgcacgacg tgcagatcac gcgcgaaagc ccgaattacc gtctcggatg
      181 aaccctggtc ggggcggtca tttcttgggt gcctgtctgc gcatgatgtg aagcccttcg
      241 ggagcccgcg acacggggcg cccctcgtgc cgcgatcgcg ggaaggccaa gactccccgg
      301 acagcagaaa aggtgcgtaa agcccttgca ggcgggcatg gagatcctcg gggcgggttc
      361 ggcctcggta aattttttcc tttccccggc acggcttgtt cacgacgagg cttgcctgct
      421 gcaaggcttc gtgccatcaa atgacgctca agatcccgcc tcagggacga tgttgcgccc
      481 ttgcaggaat gcggcgtagc atccgtagga caacaggagg aaaaccatga ttttcaaggc
      541 aagccggatg atcgcggccg ccgcattgct gggcgcgtcg tcgctgggcg cgatggcgca
      601 ggatttcaat cccaccaatc ccgaatgcat cgccccggcc aatcccggcg gcggctggga
      661 cttcacctgc cgccaggtcg gcaagacgat gcaggatctg ggattgatcg acacgacgat
      721 gcaggtcgtc aatctggccg gcggcggcgg cggcgtggcc tttgccgagg tcgtcaacaa
      781 gcgcgaggac gacaacaacc tgatcgtggc ggcgtcctcg gcgaccgcga cgcggctggc
      841 acagggcgcc tatccgggca acaccatgga tcaggtccgc tggctgggct cgatcggggc
      901 cgattacggc gtcatcgccg tggcggccga cagcgagatc aagacgctgc cggaactgct
      961 ggacaagatc aaggccgatc cgggttcgat ctcggtcgcg ggcggttcgg ccgtgggcgg
     1021 ctgggatcac ctgaaggtgc tgatcgcggc cgatgcctat ggcatcgagg atgtccgctc
     1081 ggtcaagtat atcgccttcg atggcggcgg cgaggccgtg acccagcttc tggcagggtc
     1141 ggtccaagcc ttcaccggcg acctttccga ggccaagggc tttgtcgata gcggcgacat
     1201 cagggtgatc gcggtgctgg cccccgaacg gcttgacggc gaattcgccg attttccgac
     1261 cgccaaggaa cagggtgtgg atgctgtcgg cgcgaactgg cgcggtttct atgggccggg
     1321 cggcatgtcc gacgaagcct ataacggttg ggtgtcgaag ctgggcgagc tttatgcctc
     1381 ggacgaatgg aaagaggtga tgaaggtgaa cggcatcgcg ccgctggacc ttcagggcga
     1441 ggaattccag caattcgtgt ccgaatcggt gacccggatc caggacatct cgcgcaagat
     1501 cggcatcatc aagtagacgc gggctgatgc cggcaaacat ctcgggcgcc gcgacctttc
     1561 gcggcgccgc ttctgtcccg aaaggaaatc ggcgatgagc gatcgcatcc ttggcctcgt
     1621 cggcatcctg ctggcgatcg gtttcgcgct ggccgcgctg tcgatcgagg aaagcttcct
     1681 gtcggacgct gtcggtccca aggcatttcc cctgatcatc gcggccgtcc tgggactggc
     1741 cagcatcgtc atcgcgctgc gccccgatcc cgatccgacc tggcccgccc tgggccgcct
     1801 ggccgagatc ggcgcggcgg tgctggtcat gatcctctat gccaaattgc tgccggaagc
     1861 gggtttcgtc atcgcgacag ccttcgccgc aacctatctg tcctggcgtc tcgggtcgac
     1921 gatcctctgg gccacggcga cgggaatcgg cacctcgctg ggcatttatg tcatcttcaa
     1981 tctggctctg ggtctgtcgc tggcgcgcgg cccgttcggc ttctgaagga gcgcgtcatg
     2041 gaaaccctgt ccaatcttgc cgacggcttc gccatcgcgc tgacctggca gaatctgagc
     2101 cttgccttgc tgggctgttt tctgggcacc atcatgggcg cgctgccggg gctggggcca
     2161 tcgaacggcg tggcgatcct gatcccgctg gccttcacgc tggggcttgg cgccacgccg
     2221 tcgctgatcc tgctgacctc ggtctattac ggggcgatgt atggcgggcg gatttcgtcg
     2281 atcctgctga acataccggg ggacgagcca gcgatgatga cctgtctgga cgggcacccg
     2341 atggccagga agggcctggc cggagaggcg ctgtcgctgt cgggcatcgc ctctttcgtc
     2401 ggatccttca tcgcgacctg gggcctgatc gtgctggccc cgcaactggt caagatcgcg
     2461 ctgcttttcg gaccggccga atatttcgcg ctgttcgcgc tggccttcat ga
//
LOCUS       DTVW01000483            2022 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1587399, whole
            genome shotgun sequence.
ACCESSION   DTVW01000483 DTVW01000000
VERSION     DTVW01000483.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2022)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2022)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2022
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1587399"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            1..98
                     /locus_tag="EYO87_06425"
                     /pseudo
     CDS             1..98
                     /locus_tag="EYO87_06425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014950182.1"
                     /note="catalyzes the fromation of 2'O-methylated cytidine
                     or 2'O-methylated uridine at position 32 in tRNA;
                     incomplete; partial in the middle of a contig; missing
                     N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="tRNA
                     (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ"
     gene            237..821
                     /locus_tag="EYO87_06430"
     CDS             237..821
                     /locus_tag="EYO87_06430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011746677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent oxidoreductase"
                     /protein_id="HIC65620.1"
                     /translation="MARPRIAVIVSSTRDARFADKPAEWLMAQVADHPDLDFEKVDLR
                     EQNLPFFNEAASNLWVESKDPNALAWQRKLDGFDGFMFVLAEYNHSVPGALKNAMDQA
                     YKEWNRKPMTALAYGGAGGARALEHLRMIAVELQMAPLRNAVHIGGGDFLKVSPMGED
                     APMSEIEDHLAASLKATLEDLVWWTKALKAARAG"
BASE COUNT          361 a          622 c          666 g          373 t
ORIGIN      
        1 cgctggaaga agcggtaaaa gactgtggtt tagttgtagg caaatcagcc cgttctcgta
       61 cgcattcttg gcctatgctt ggccctcgtg attgcggttt taatgaacgt cgaaactatt
      121 cgtcgaataa tcgtatgtcg taatgaacag tagtattgaa tgcgcaaaag cccttgcaac
      181 cggtcaggtc gcgatcgcgt tggtggggat attgcccaac gaagaaagga caggtcatgg
      241 ccagaccccg gattgccgtc atcgtcagtt ccacgcgcga cgcccgtttc gccgacaagc
      301 ccgcggagtg gcttatggcg caggtcgcgg atcaccctga tctggacttc gagaaggtcg
      361 acctgcgcga acagaacctt cccttcttca acgaggccgc gtcgaatctg tgggtcgaat
      421 ccaaggatcc gaacgcgctg gcctggcaga ggaagctgga cggtttcgac ggcttcatgt
      481 tcgtgctggc cgaatacaac cactcggtcc ccggggcgct gaagaacgcc atggatcagg
      541 cctacaagga atggaaccgc aagccgatga ccgcgctggc ctatggcggc gcggggggcg
      601 cgagggcgct ggagcatctg cggatgatcg ccgtggaatt gcagatggcg ccgctgcgca
      661 atgcggtcca tatcggcggc ggcgatttcc tcaaggtttc tcccatgggc gaggatgcac
      721 cgatgagcga gatcgaggat catctggcgg cgtccctgaa agcgacgctt gaagatcttg
      781 tctggtggac caaggcgttg aaagccgcgc gagcggggtg aatccggagt gacgaaaaca
      841 agaaggccgc gcgattcggt gaatgcgcgg ccttttcgat gaatcctcgg ctccgatcag
      901 atccggtcca gctgatcgtc tatggcggcc gcgatctcgc ggcggatcac ggcgcgcagg
      961 ttgcgtgaaa agcgctgacc catctcgccc tgcaattcct cctggatcat ctcgcgcagc
     1021 agatcgcgga tgccctgctc ttccacttca ggctgatgtt gcgggctggc gggttcattg
     1081 gctgccgcga ccggcgcctc ggcaggaacc ggagaaacgg cggtttcctg cgccgccgac
     1141 ccggtcggga tcgaagcgat ttcagcggtc gggcgatgcc agacctcgca ggcccccgcg
     1201 gcggcggcaa gcggcgcgat tctcgcctcc ggaacgggtt cgctggctgc cagttccggg
     1261 accggatcgg acgcagatcg tggctggctg ctttcggcag tctctgccgc ggacttccgt
     1321 tctggcaggg attttaccgc gatcggcgcc gagtcgttca tcgcgccccc atccgccggt
     1381 tcggggcgca tccgggcctt ccagtcaaag gcttcggcga aggcgtcttc ctccatcatg
     1441 gcctcgaaat cgtgcagagg ggtcggcccg gccgcatcac tgccccggcg caggtccggc
     1501 aaaggatcct catccgaagc cgatttcgca tcaatcccgg cgttccggtc tctaggcaag
     1561 tcacgcagcg gacccgaatt gacccggcgg gccacgtcca gacgaagcgg ccgaggcgcg
     1621 ggcggaaccg gctgatgtgg cgagggcgcg gaaaacgacg ctccgattcg tcccgagaac
     1681 gagccctcgg gctgcggggt tgttgcggac atgtggcacg caagttcgct gcccggcaat
     1741 tccgccacag cctcggtatc ggcgtggcga acaacgcgac cggcttcatc gggcctttgc
     1801 ggcggctcgg ggggcgtttc cggcatgatc ggcctgggcc gggcggcatc ggcgccattc
     1861 gcggcctgac ccagcggcca accctccgcc tcgggctcga ccgccgcgtc gccgaaacgc
     1921 gaccgcgcca gttgtcgggc aagagcggcg tttccaccgt gacgtcgtgc cagaaattcg
     1981 gccgaatcct cgtcgatgac acgagacgcg gattctcgat cc
//
LOCUS       DTVW01000484            1710 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1587880, whole
            genome shotgun sequence.
ACCESSION   DTVW01000484 DTVW01000000
VERSION     DTVW01000484.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1710)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1710)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1710
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1587880"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            80..703
                     /locus_tag="EYO87_06435"
     CDS             80..703
                     /locus_tag="EYO87_06435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011568747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HIC65621.1"
                     /translation="MRIISSMKAGLCALLMTALAVPVSAQGLRLSGSSSKSRAEQFAR
                     QTRLMDSRLAGQYQESARLQPGGKDRGIADIQLSNRIPAYRGRSSDYIPHARAAARKY
                     GVPEDLFLRLVQQESGWNPRARSRKGATGLAQLMPGTAAKLGVNPLDPVQNLQGGARY
                     LRMMYNQFGNWRLALAAYNAGPAAVAKYNGVPPYRETMNYVRVIAGS"
     gene            complement(704..1042)
                     /locus_tag="EYO87_06440"
     CDS             complement(704..1042)
                     /locus_tag="EYO87_06440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65622.1"
                     /translation="MSDLFLRLDWASARGRDQQSLIEDEFRAERASSLGMAGRRLERA
                     LAALEDCDDAGRENLIEPAARAAWEFMVTREMAGLRDWPSVARQYRIPRSVLLRMGAA
                     PSKCGPDPRR"
     gene            complement(1119..>1710)
                     /locus_tag="EYO87_06445"
     CDS             complement(1119..>1710)
                     /locus_tag="EYO87_06445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011749914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HIC65623.1"
                     /translation="AIAHVRRAADMGYRIKLLGVAQMTPRGLEQRMAPCLVPAESPLG
                     QLMGGTNMVVVEGDSVGQIVLRGAGAGEGPTASAVLSDVVEIARGVRMPVFGQPAAAL
                     QRAKPARTAVPAAYYMRLELQDKPGALAKVATVLGDAGISIDRMRQYGQHSDSSVPVL
                     VVTHKTTPEAIDYAIEALPRTGVLVSDPVELRIEEV"
BASE COUNT          266 a          569 c          593 g          282 t
ORIGIN      
        1 cggggtgccg cggctggcgg aaagggcggt ttgctgtata gtcgccggaa aagccaagaa
       61 catgaacgag ggcgaaggca tgaggatcat ctcaagcatg aaggcggggc tgtgcgcgct
      121 gctgatgacg gcgctcgcgg ttccggtttc ggcccagggc ctgcgcctgt cgggcagttc
      181 ctcgaagtcg cgggccgaac aattcgcgcg ccagacgcgg ctgatggatt cgcgactggc
      241 cggtcagtat caggaatcgg cgcggcttca gcccggcggc aaggatcgcg gtatcgccga
      301 catccagttg tccaaccgta tcccggccta tcgtggcaga agcagcgact atatccccca
      361 tgcccgcgcg gcggcccgca aatatggtgt gcccgaggat cttttcctgc gtctcgtgca
      421 gcaggaatcg ggctggaacc cgcgcgcccg ctcgcgcaag ggggcgaccg ggttggcgca
      481 gctgatgccc ggcacggcgg ccaaactggg ggtgaatccg cttgatccgg tgcagaatct
      541 gcaaggcggg gcacgctatc tgcgcatgat gtacaaccag ttcggcaatt ggcggctggc
      601 gcttgcggcc tataatgccg ggccggcggc ggtggcgaag tataacggcg tgccgcccta
      661 tcgcgagacg atgaattacg tccgcgtcat cgcgggaagc tgatcaccgc cggggatcgg
      721 gtccgcattt cgacggagcg gcccccatgc gcagcagcac cgagcgcgga atccggtatt
      781 gccgcgcgac cgagggccag tcgcgcaggc ccgccatttc gcgcgtgacc atgaattccc
      841 acgcggcgcg ggccgcgggc tcgatcaggt tttcccggcc tgcatcgtcg cagtcttcca
      901 gcgccgccag cgcgcgctcg agccgtctgc ccgccatgcc cagggacgag gcgcgttcgg
      961 cccgaaattc gtcctcgatc aggctttgct gatcgcggcc gcgggcgctg gcccagtcga
     1021 ggcggaggaa aaggtccgac atggatttcg ttcccggaac tgcctccatc cagcctagcg
     1081 cgctgcggcc caggtgcaag ggggccggtc cggtttgctc agacttcctc gatccgcagt
     1141 tccacggggt cgctgacaag cacgccggtg cgcggcagtg cttcgatcgc gtagtcgatg
     1201 gcctcgggcg tcgtcttgtg ggttacgacc agcaccggca cgctgctgtc gctgtgctgg
     1261 ccgtattgac gcatccggtc gatcgagatt ccggcatcgc cgagaaccgt cgccaccttg
     1321 gccagcgcgc cgggcttgtc ctgcaattcc agccgcatgt aataggccgc gggcaccgcc
     1381 gtgcgggcgg gcttggcccg ttgcagcgcg gcggcgggct ggccgaagac cggcatccgg
     1441 acaccgcgcg cgatctcgac cacgtcggac aggaccgcgc tggcggtcgg gccttcgccg
     1501 gcaccggcgc cgcgcagaac gatctggccg acgctgtcgc cctcgaccac gaccatgttg
     1561 gtgccgccca tcaactggcc cagcgggctt tccgccggca ccaggcaggg cgccatgcgc
     1621 tgttccaggc cgcgcggcgt catctgcgcc acgcccagca gcttgatgcg atagcccatg
     1681 tcggccgcgc ggcggacatg ggctatcgca
//
LOCUS       DTVW01000485            1323 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_158795, whole
            genome shotgun sequence.
ACCESSION   DTVW01000485 DTVW01000000
VERSION     DTVW01000485.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1323)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1323)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1323
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_158795"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..540
                     /locus_tag="EYO87_06450"
     CDS             <1..540
                     /locus_tag="EYO87_06450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_353736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/methenyltetrahydrofolate cyclohydrolase"
                     /protein_id="HIC65624.1"
                     /translation="IDPAKDVDRFHILNAGRLATGQKAMVPCTPLGCLMLLRDRLGSL
                     SGRHAVVIGRSNIVGKPMAQLLLRDSATVTIAHSRTRDLPVLCRQADILIAAVGRPHF
                     IKGDWIKPGATIIDVGINRTDDGLVGDVDFAAARNVAAAITPVPGGVGPMTIACLLAN
                     TLTATARANGLPDPEGLTP"
     gene            complement(613..1023)
                     /locus_tag="EYO87_06455"
     CDS             complement(613..1023)
                     /locus_tag="EYO87_06455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005851662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PaaI family thioesterase"
                     /protein_id="HIC65625.1"
                     /translation="MTEFENRIRDSFSRQTMMQTLGARLQRIAEGRVAIEAPILPGAL
                     QQQGAGHAGLAFSIGDSAAGYSALTLMPADREVMTVEMKINLMSPALGQRLLAEGRVI
                     RAGRRIMVVAADIWAETGTARKHVAVLQGTMIPV"
     gene            complement(1016..>1323)
                     /locus_tag="EYO87_06460"
     CDS             complement(1016..>1323)
                     /locus_tag="EYO87_06460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008329594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Holliday junction branch migration DNA helicase
                     RuvB"
                     /protein_id="HIC65626.1"
                     /translation="RQIADAALTRLGVDDLGLDGADRRYLTLMAEHYAGGPVGVETLS
                     AALSESRDAIEEVIEPYLLQQGLIARTPRGRQLAARAWRHLGLDAPKAARQGGLFHD"
BASE COUNT          214 a          494 c          403 g          212 t
ORIGIN      
        1 atcgacccgg ccaaggatgt ggacaggttc cacatcctca acgccgggcg gctggcgacg
       61 ggacagaagg ccatggtgcc ctgcacgccg ctgggctgcc tgatgctgct gcgcgaccga
      121 ttgggcagcc tgtccggccg tcacgccgtg gtcatcggcc gatccaacat tgtcggcaag
      181 ccgatggcgc aattgttgct gcgcgacagc gccacagtga ccatcgccca ttcccgcacc
      241 cgtgatctgc cggtgctctg ccgccaggcc gatatcctga tcgccgccgt gggccggccg
      301 catttcatca agggcgactg gatcaaaccc ggcgcgacga tcatcgatgt tggcatcaac
      361 cgcaccgatg acggcctggt cggcgatgtg gatttcgcgg cggcgcgcaa tgtcgccgcc
      421 gcgatcacgc cggttccggg cggtgtcggt ccgatgacca tcgcctgcct tctggccaat
      481 acgctgacgg cgaccgcgcg cgcgaacggc ctgcccgacc cggaagggct gacaccctga
      541 tcggagatgc cgggccgcag gcttcttcgt tgcaaaaata cccggcccgg cacgccgctg
      601 cgcgccaggc tgctagacgg gaatcatcgt gccctgcaac accgcaacat gctttcgcgc
      661 cgtgccggtt tcagcccaga tatcggccgc cacgaccatg atccgccgtc cggcccggat
      721 cacccgtccc tctgccagca gccgctgacc cagggccggt gacatcaggt tgatcttcat
      781 ctcgaccgtc atcacctcgc ggtccgccgg catcagggtc agcgccgaat agcccgccgc
      841 cgaatcgccg atcgagaagg ccagcccggc atggcccgcg ccttgctgct gaagcgcgcc
      901 gggcaggatc ggcgcctcga tcgcgacccg cccctcggca atcctctgca gccgcgcgcc
      961 aagggtctgc atcatcgtct gccgcgagaa actgtcgcgg atccggttct cgaactcagt
     1021 catgaaaaag cccgccctgc ctagccgcct tcggcgcatc cagccccaga tgacgccagg
     1081 cccgcgccgc cagttgccgt ccccggggcg tgcgcgcgat cagcccctgt tgcagcagat
     1141 agggctcgat cacctcctcg atggcatcgc ggctttccga cagcgcggcc gacaatgtct
     1201 cgacgccgac cggcccgccc gcataatgtt cggccatcag cgtcagatag cgacggtccg
     1261 ccccgtcaag gcccagatcg tccacgccca gccttgtcag cgccgcgtcc gcgatctgcc
     1321 ggg
//
LOCUS       DTVW01000486            2075 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1588113, whole
            genome shotgun sequence.
ACCESSION   DTVW01000486 DTVW01000000
VERSION     DTVW01000486.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2075)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2075)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2075
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1588113"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..853)
                     /locus_tag="EYO87_06465"
     CDS             complement(<1..853)
                     /locus_tag="EYO87_06465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011750155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IclR family transcriptional regulator"
                     /protein_id="HIC65627.1"
                     /translation="MAEPQRKRGRPRSAPEAAGTIQALDRALDILDLLAAHPGLTLSE
                     VAERMDQSPSTVHRVLHTLAARGVAESDPATQAWHIGPATFRLGSAFMRRSGIVERAR
                     PILRALMEHTGETANLGILNGDAVLFVSQAETHETIRAFFPPGTRSALHASGIGKALL
                     AFGRPEILREVLERAPLQRFTDNTLTTPEALQADMSRIRHRGFAFDDEERTRGMRCIA
                     APVFDLTGEAVAGISVSGPTHRIGHEHVKTLGAAVAAAAGVALGFVVLRVGSPRGAPL
                     GCVVLCVG"
     gene            1039..>2075
                     /locus_tag="EYO87_06470"
     CDS             1039..>2075
                     /locus_tag="EYO87_06470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010395294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HIC65628.1"
                     /translation="MTSQNPVFIPGPTNIPEVLRKAVDMPTIDHRSPVFGRILHPALD
                     GVKQVLKTAEGRVFVFPSTGTGGWETAITNTLSAGDKVLATRNGMFSHRWIDMCQRHG
                     LDVQVVMQEWGEGVPADRFEDILTADREHQIKAVLATHNETATGVRSDIAAVRRALDA
                     AGHPALLLVDGVSSIACYDFRMDEWGVDIAVTGSQKGFMLPPGLAILGFSPKAMAAVE
                     TARLPRTFFDIRDMARGYAANGYPYTPPVGLLNGLNLACQMLLDEGLDNVFARHHRIA
                     EGVRRAVDAWGLRLCAARPDLYSDSVSAIRVPEGFDANRIVSHALNTYDVAFGTGLGD
                     VAGKGFRIGHLG"
BASE COUNT          346 a          693 c          696 g          340 t
ORIGIN      
        1 agccgacgca cagcacgacg cagcccagcg gcgcgccccg cggcgagccg acgcgcagca
       61 cgacgaagcc cagcgccacg cccgcggcgg cggcgacggc ggcgcccagc gtcttgacat
      121 gctcgtgccc gatccggtgg gtcgggccgc tgacgctgat gccggccacg gcctcgcccg
      181 tcagatcgaa gaccggggcg gcgatgcagc gcatcccgcg ggtacgttcc tcgtcgtcga
      241 aggcgaagcc gcgatggcgg atgcgcgaca tgtcggcctg caatgcctcg ggcgtggtca
      301 gggtgttgtc ggtaaagcgt tgcagcggcg cgcgctccag cacctcacgc aggatctcgg
      361 ggcggccgaa ggccagcagc gccttgccga tgccggaggc gtgcagcgcc gagcgggtgc
      421 cgggcggaaa gaaggcgcgg atcgtctcgt gcgtttcggc ctggctgacg aacagcaccg
      481 cgtcgccgtt caggataccc agattggcgg tttccccggt atgttccatc agtgcgcgca
      541 ggatcgggcg cgcgcgctcg acgatgcccg agcggcgcat gaaggctgat cccagccgga
      601 aggttgccgg cccgatatgc caggcttggg ttgccgggtc gctttccgcc acgccgcgcg
      661 cggccagcgt atgcagcaca cggtgcacgg tcgagggcga ctggtccatc ctttcggcca
      721 cctcggacag cgtcaggccg ggatgggcgg ccagcaggtc cagaatgtcc agcgccctgt
      781 ccagcgcctg aatcgtgccc gcggcctcgg gcgcgctgcg cgggcgaccc cgtttgcgtt
      841 gcggttcagc cattttcaac ctctgcttaa ttcagccatc tcttgcggac gaaaatcccg
      901 ttgcgcaact ggaaaatcgc aacgctctgt aaaaacggga caatccggaa catttccgct
      961 tgccggaaat gatttccaga aaaattgcga acttgcaagg gcagggctag catttcgata
     1021 ctcgcaggag gagtcgccat gacaagccag aaccccgtct tcattcccgg tcccaccaac
     1081 attccagagg tgctgcgcaa ggccgtggac atgcccacga tcgaccatcg cagcccggtt
     1141 ttcgggcgca tcctgcatcc cgcgctggac ggcgtgaaac aggtgctgaa gacggccgag
     1201 ggcagggtct ttgtctttcc ctcgaccggc accggaggct gggaaaccgc gatcaccaac
     1261 acgctgtcgg ccggcgacaa ggttctggcc acccgcaacg gcatgttcag ccatcgctgg
     1321 atcgacatgt gccagcggca cgggctggac gtccaggtcg tcatgcagga atggggcgag
     1381 ggcgtgcccg ccgatcgctt cgaggacatc ctgaccgcgg acagggaaca tcagatcaag
     1441 gcggttctgg ccacccataa cgaaaccgcg accggcgtgc gcagcgacat cgccgccgtc
     1501 cgccgcgcgc tggatgccgc aggccacccg gctctgctgc tggtcgatgg cgtcagttcg
     1561 atcgcttgct acgatttccg catggatgaa tggggcgtcg atatcgccgt gaccggcagc
     1621 cagaagggct tcatgctgcc gccgggcctg gccatcctgg gcttttcgcc caaggcgatg
     1681 gcggcggtcg agaccgcccg gctgccgcgc accttcttcg acatccgcga catggccaga
     1741 ggctatgccg ccaacggtta tccctacacg ccgccggtcg ggttgctgaa cggcctgaac
     1801 ctggcctgcc agatgctgct ggatgagggg ctggacaatg tctttgcccg ccatcaccgc
     1861 atcgccgagg gcgtgcgccg cgcggtcgac gcctggggct tgcggctttg cgcggcgcgg
     1921 ccggatctgt attccgacag cgtcagcgcg atccgcgtcc ccgagggctt tgacgccaac
     1981 cgcatcgtca gccatgcgct gaacacctat gacgtggcct tcggcaccgg tctgggcgac
     2041 gtggccggca agggcttccg catcgggcat ctggg
//
LOCUS       DTVW01000487            1599 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1590491, whole
            genome shotgun sequence.
ACCESSION   DTVW01000487 DTVW01000000
VERSION     DTVW01000487.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1599)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1599)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1599
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1590491"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..639
                     /locus_tag="EYO87_06475"
     CDS             <1..639
                     /locus_tag="EYO87_06475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010394179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing sensor histidine kinase"
                     /protein_id="HIC65629.1"
                     /translation="PLAGIRGAAQIMGMNASAEDREMAEMIVSETRRIAALLEQVERF
                     GDTSPPELRPVNIHDVLEKVRRSAQVGFGRRVQIVADYDPSLPPALADPDQLTQVCLN
                     LVKNAAEALKGTELPVIRLHSHYDHILRLPPDEADPTGRPLPLQIAIEDNGPGLPLAI
                     ADQIFEPFVSGRENGTGLGLALVSKIITDHGALIRVDSRPGRTVFRISLPKA"
     gene            651..>1599
                     /locus_tag="EYO87_06480"
     CDS             651..>1599
                     /locus_tag="EYO87_06480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54-dependent Fis family transcriptional
                     regulator"
                     /protein_id="HIC65630.1"
                     /translation="MDGTVLIADDDRTIRTVLTQALTRAGCRVHATGSLAQLSKWVEE
                     GRGDLVITDVMMPDGNGIDRIPAIRQARPDLPVIVISAQNTIVTAIRATEAEAFEYLP
                     KPFDLPDLMSKANLALSRRPRKSEPAPEPDPAPRQGADPAMPLIGHAPAMQNLFRMVA
                     RILNADLPVLIAGEPGVGKTTIARSFHDLSDRRGRGLAVLTSADAGPEAIGRASEKAR
                     GGSIVIENPAGFDQGAQARLIGLIEAMESGPDRAQAPRIVATTGPDPQTDVASGRLRS
                     DLYYRLAGVTVSVPPLRARVDDILPLAAHLLARAAAQGLP"
BASE COUNT          267 a          564 c          525 g          243 t
ORIGIN      
        1 ccgctggcag ggatccgggg tgcggcgcag atcatgggca tgaacgcctc ggccgaggat
       61 cgcgagatgg ccgagatgat cgtcagcgag acccgccgca tcgcggccct gctggaacag
      121 gtggaacggt tcggcgatac ctcgccgccc gaactgcggc cggtcaacat ccacgacgtg
      181 ctggaaaagg tgcgccgctc ggcccaggtg ggctttggca ggcgggtgca gatcgtggcc
      241 gattacgacc cgtcgctgcc gcccgccctg gccgatcccg accagctgac gcaggtctgt
      301 ctgaaccttg tcaagaacgc ggccgaggcg ttgaaaggca ccgaattgcc ggtgataagg
      361 ctgcacagcc attatgacca tattttgcgc ctgccacccg atgaagccga cccgacgggt
      421 cggccgctgc ccctgcagat cgcgatcgag gataacggac ccggactgcc cttggcgatc
      481 gccgatcaga tcttcgagcc tttcgtctcg ggccgcgaga acggcaccgg acttggcctg
      541 gcgctggtca gcaagatcat caccgaccac ggcgcgctga tccgcgtgga cagtcgcccc
      601 ggccgcaccg tattccgcat ctcgcttccc aaggcataag gaccgacgcc atggacggaa
      661 ccgttctgat cgccgacgac gaccgcacca tccgcacggt gctgacccag gcgctgaccc
      721 gcgcaggctg ccgggttcac gcgaccggca gcctggcgca attgtcgaaa tgggtcgagg
      781 aggggcgcgg cgatctggtc atcaccgacg tgatgatgcc cgatggcaac ggcatcgacc
      841 gcatccccgc catccggcag gcacggcccg atctgccggt gatcgtgatc tcggcccaga
      901 acaccatcgt caccgcgatc cgtgcgaccg aggccgaggc gttcgaatat ctgcccaagc
      961 ccttcgatct gcccgacctg atgagcaagg cgaaccttgc cctgtcacgc cgcccgcgca
     1021 aatcggaacc cgcgcccgaa cctgaccccg cgccgcgcca gggcgccgat ccggcgatgc
     1081 cgctgatcgg tcatgcgccc gccatgcaaa acctgttccg catggtcgcg cgcatcctga
     1141 acgccgatct gccggtcctg atcgcgggcg agccgggcgt cggcaagacc accatcgcgc
     1201 ggtcctttca cgacctgtcg gaccggcgcg gccgggggct ggcggtgctg acctcggccg
     1261 atgccggacc agaggcgatt ggccgcgcct ccgagaaggc gcgcggaggc tcgatcgtga
     1321 tcgagaaccc ggcaggcttc gatcagggtg cgcaggcccg tctgatcggg ctgatcgagg
     1381 cgatggaatc cggccccgat cgggcgcagg ctccgcgcat cgtggccacg accggccctg
     1441 atccgcagac cgatgtggca tcgggacgac tgcgatcgga tctctattac cggcttgccg
     1501 gcgtcaccgt ctcggtgcct ccgctgcgcg cacgggtcga tgacatcctg ccgctggccg
     1561 cgcatctgct ggcacgcgcc gcggcccagg gcctgcccg
//
LOCUS       DTVW01000488            1385 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1591277, whole
            genome shotgun sequence.
ACCESSION   DTVW01000488 DTVW01000000
VERSION     DTVW01000488.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1385)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1385)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1385
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1591277"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..189)
                     /locus_tag="EYO87_06485"
     CDS             complement(<1..189)
                     /locus_tag="EYO87_06485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010396156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65631.1"
                     /translation="MQSKRFARLTGGSLLLLFVLAACQQGYGTATGLSPDAQRAAGGA
                     VAGAVIAKALDEDIATGAA"
     gene            complement(320..724)
                     /locus_tag="EYO87_06490"
     CDS             complement(320..724)
                     /locus_tag="EYO87_06490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352244.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65632.1"
                     /translation="MLKHRGFPGRLPGTDFQFTIRRENRRQGATPITRRERFRDRKAA
                     DRRADAGFLAALIRHFGSEPFERGNLDAGRLGWLIGREVKAVGDFDPADYGQLLQVDM
                     VAAEAAFPEIFAPDALAAPGWNADDTDDGDEE"
     gene            complement(1136..>1385)
                     /locus_tag="EYO87_06495"
     CDS             complement(1136..>1385)
                     /locus_tag="EYO87_06495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011046841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="methylmalonyl-CoA carboxyltransferase"
                     /protein_id="HIC65633.1"
                     /translation="VMGAKGAVEILYRSELGDADKIAARTRDYEDRFANPFVAAEKGF
                     VDDVIQPRSTRRRVARAFASLRGKNLSNPWKKHDNIPL"
BASE COUNT          228 a          449 c          466 g          242 t
ORIGIN      
        1 cgcggcgccg gtggcgatat cctcgtccag cgccttggcg atgaccgcac ccgcaacggc
       61 accccctgcc gcgcgctgcg catccggcga caggccggtc gcggtgccgt agccctgctg
      121 gcaggccgca agaacaaaaa ggagaagaag cgaaccgccc gtaaggcggg caaaacgttt
      181 ggattgcatg gtaacttgcc tgtttctgtg actcgggttc gagccgggtt tcggtcgtgc
      241 gaggctacta tggcacagtg cgccgatctg tcaaattgac atgggcgtga cggtaaagtg
      301 gcaagcagct tatcgcccat cattcctcgt ccccgtcatc cgtgtcgtcc gcgttccagc
      361 cgggcgcggc aagggcgtcg ggcgcgaaga tctcggggaa cgcggcttcg gcggctacca
      421 tgtccacctg cagcaactgg ccgtaatcgg ccgggtcgaa atcgcctacc gccttgacct
      481 cgcgcccgat cagccagccc aggcgtcccg cgtccagatt accgcgttcg aagggttcgg
      541 agccgaaatg ccggatcaga gccgccagaa agcccgcatc ggcgcgccgg tcggcggcct
      601 tgcgatcgcg gaatcgctcg cgtcgggtga tcggcgtcgc gccctgcctg cggttctcgc
      661 ggcgaatggt gaactggaaa tcggtgcccg gcagacggcc tggaaaaccg cgatgtttca
      721 gcatgttccg cgcctccgca aggcttgggg cgcgaccgcg cgcgggcagc ggggccgccc
      781 gcgcagggct gtgtcagttt tcgtactggc cctggaaatc gggctgaggt gtgaccgcgc
      841 cgtccatcgg agtatagacg ttgatttcgg gctcccgacg ctggcaggcc gcgagggccg
      901 agaccagaac caggccgaga atgatctttt tcgacatatc atcttgctcc tgtgatgcgg
      961 gcgcggctgc gcccggctgc ccgggagcgc accttgacgg gtctccccgc agccgatgat
     1021 agccgccatg aacgcggcca gacagcgggg ctgtctcggg ctgggcggat agccgccggg
     1081 ccggggccgg cccgcatcat tcaggcgcat gggcatcatg agcaaattcc gaaacctaca
     1141 ggggaatgtt gtcgtgtttc ttccacggat tcgacaggtt cttgccgcgc aggctggcaa
     1201 aggcccgggc cacgcgccgc cgggtcgagc gtggctggat cacgtcatcg acgaagcctt
     1261 tctcggccgc gacgaaggga ttggcgaaac ggtcctcgta atccctggtc cgggccgcga
     1321 tcttgtcggc gtcgcccagt tcgctgcgat acaggatctc gaccgcgccc ttggcgccca
     1381 tcacc
//
LOCUS       DTVW01000489            4352 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1591845, whole
            genome shotgun sequence.
ACCESSION   DTVW01000489 DTVW01000000
VERSION     DTVW01000489.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 4352)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4352)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4352
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1591845"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..594
                     /locus_tag="EYO87_06500"
     CDS             <1..594
                     /locus_tag="EYO87_06500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HIC65634.1"
                     /translation="MRLVPICQEPKTSRKHPAHEICPDLLRDLPVTRPDQVWCVDISA
                     IPMRRGFLYLVAIMDWFSRKVPSWRLSNSMEAGFCVEALTEALARYGEPEIFNSDQGA
                     QFTSTDFTDVLHDAKVKISMDGRGRWIDNRMIERLWRSLKYECVYLNACGTGSEARNG
                     IGTWISCYNERRPHSSHGLMTPGEAYDTPPKTLKAAA"
     gene            complement(1111..2189)
                     /locus_tag="EYO87_06505"
                     /pseudo
     CDS             complement(1111..2189)
                     /locus_tag="EYO87_06505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_353280.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(2189..2743)
                     /locus_tag="EYO87_06510"
     CDS             complement(2189..2743)
                     /locus_tag="EYO87_06510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_353281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HK97 family phage prohead protease"
                     /protein_id="HIC65635.1"
                     /translation="MLWGGNLGALELRSEGGATRLRATFPYGAETELAPGRREVIASR
                     TFSDRIEAGEDIHLLSGHDYNKPLASRAAGNLTLADGDDALVIEATIADGTTWARDFL
                     AAHAGGLIRGLSPGFRVDLGGERIERRGNSVLRTISPAALFELSAVTRPAYSSAQIEA
                     RAWETHQDRQPYRGAVHHLNRWRL"
     gene            complement(2743..3895)
                     /locus_tag="EYO87_06515"
                     /pseudo
     CDS             complement(2743..3895)
                     /locus_tag="EYO87_06515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998085.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phage major capsid protein"
     gene            complement(3905..4240)
                     /locus_tag="EYO87_06520"
     CDS             complement(3905..4240)
                     /locus_tag="EYO87_06520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HIC65636.1"
                     /translation="MGMMRQYHRHSKRVTSTRRWQVLRHVVLERDGWACVDCGQTRGR
                     LEIDHIQPVRTRPDLGFCPANCATRCPSCHTKKTRIECGHSAPIITPERQAWGKAVAE
                     LATNPNPAT"
BASE COUNT          758 a         1445 c         1381 g          768 t
ORIGIN      
        1 atgcgtctgg tgccgatctg ccaggagccg aaaaccagca ggaagcatcc ggcgcacgag
       61 atttgtccgg acttgctccg ggatctgccc gtcacccggc cagatcaggt ctggtgtgtc
      121 gacatcagcg ccatcccgat gcgccgtggg ttcctgtacc tcgtggcgat catggactgg
      181 ttcagccgaa aggtgcccag ctggcggctg tcaaactcca tggaggccgg gttctgcgtc
      241 gaggcgctga cggaggctct ggccagatat ggggagccgg agattttcaa ttcggatcag
      301 ggcgcgcagt tcaccagcac cgatttcacc gacgtgctgc acgacgccaa ggtgaagatc
      361 tcgatggacg gacgcggccg ctggatcgac aaccggatga tagagcggct ctggcggtcg
      421 ttgaaatacg aatgcgtcta cctgaacgcc tgcgggaccg gctctgaagc ccgtaacggg
      481 atcggcacct ggatcagctg ctacaacgaa agacgcccgc actcatcgca tgggctgatg
      541 acgccaggcg aggcctatga tacgccgccc aagaccctga aagccgccgc ctgaaatgaa
      601 acccatgcca tagcttaccc cggcggaata ctggtcgaaa acgcaggacc acctctctcc
      661 gatgagcaac tggatggcgc ttacgtactg accaaacagt tcagcgggca ggtagccttg
      721 atccacggat tcattgatga ctacgaggtc tgcaatatcc ttcgccagcg gctcgaaacc
      781 gagggcggaa cctatagctg cgtgctggaa tccaatatcg gaattaatcc atagagacct
      841 agctcacgga gggaggccgg attggtcgac cgctgacaga acggggccgg tgcagcatcc
      901 cactgccccc ggccccttgg tcccctgacg cggggtccgg tggctgcccc cgctgtaatc
      961 cgtgacaacc tgcgccgcgc cccccggaag tatcggaagg ggaccgcgcc gtgacggggt
     1021 tatggctacc caaaagccgg gcactcaccg tctaatccca gatgcttcgc gggaacagaa
     1081 atccgcaggg cgcatcccgg ccctatgccg tcagtcctgc cagtcgatga acgactcggc
     1141 atccttgatc gtcgccacgt ccaggcctgc cgccttggcc tcggccagcg cgcccagcat
     1201 cgtcgcgaaa gcccgcgcct tgctgccagc gtcgaaagct gcatcggcct cacgcagtcg
     1261 atttttacgg ccagcccgat tttttcgctg gcttcctcgg ccagcaggtt ggcgatcggt
     1321 tgcaggacaa gctgcgccag gtgccgctgg gcctcgcgca ccatcggccc ggtcgtcgcc
     1381 gggttcatca ggccgggcag aatgccgaag gtgccgtaga tcgcgccctt ggcatcggcc
     1441 aacagcttgt cggccagggt cttgtccaga tgcggggaaa gctgatcggg gtgctggccg
     1501 atctgggggt tcatgccagc cgccgtcgcc tgcgccacgc cctcgatcac cagagccgcg
     1561 ccgcgccgcc cgcgaaagcc tgcccgaagt tgctccatat cgtcggcgct gccctcgggg
     1621 acggggacga tctggctgcc gaggggcgca ttcttgaaca cgtcgcgcag ggccgtttcc
     1681 agttcatgca gaagctgtgc cgagagttgc gcccgccgca ggggtgccgt gcctgcccac
     1741 ggggtcgatg cgtcacagcc gatgcggaaa tgcagaacct caggggccag cacggtttcc
     1801 cgccgcccac cgccgatctc ggggatgccg agtcgatagg agcggggaat gccgttgcgg
     1861 gtcgatacgt cccaatcggt cgccggaata agccggtcgc ggaccaggaa gacacattcg
     1921 ccacgcaagg ccagagcgcg ggcgatgatc gccatcgtgc gccggtccag cagatcggtg
     1981 ccggtcacat cggccagaga aaggccactt tcccagaggc tcacagaggt ttgcaccgcc
     2041 gccgtgagtt cggccatgcc ggacgcgccg ctgatccacg cttcccgcgc cgccatgatc
     2101 gaagcggtgt agccggtgcc ggatgaacgg gtttcaacgg gtggttgccc gccccttgat
     2161 ccacgccgga acagatccag gacgcccatc agagcctcca ccgattcaga tgatgaacag
     2221 cgccacgata gggctgccgg tcctgatggg tttcccaagc ccgcgcctcg atctgggccg
     2281 aggaataggc ggggcgggtg actgccgaga gttcaaacaa cgccgccggg ctgatggtcc
     2341 gcaggacgct gttgccgcgc cgctcgatgc gttcgccgcc cagatcgaca cggaagcccg
     2401 gcgacaggcc ccggatcagc ccgcccgcgt gagccgccag aaagtcacgc gcccaggtcg
     2461 tgccatccgc aatcgtcgcc tcgatcacca gcgcgtcgtc gccatcggcc agggtgaggt
     2521 tgcccgccgc ccgcgaggca aggggtttgt tgtaatcgtg accggacagc aggtggatat
     2581 cctcgcccgc ctcgatccga tccgagaatg tccgagaggc gataacctcg cgccgccccg
     2641 gtgccagttc ggtttcggct ccatagggga acgtcgcccg aaggcgggtt gccccgccct
     2701 cgctgcgcag ttccagcgcc ccgagattgc cgccccacag catcagggtt caccgatgcc
     2761 ggtcaggatg cgggtttgca aaccgcgcgg gacagtgaag tccgcggtga caagcccggt
     2821 caggaccctg cacgttggcc gtcatgatcg ccgtttcacc ggggatcacg ttgctgatcg
     2881 ccggggttcc gacatgcttg gtcaggcggt cccattcgct cacagccgtg ccgctgatca
     2941 acgcatcatc cagagccgcc cagatcgccg ggtcaaagcc caggttcact tggctggccg
     3001 aggtgatcgc gttggcctgc atgaaggcca cgacttcggc gcggaatgcc gcccaggttg
     3061 ccgtcgcgcc aacggcagtc tcggtgatgc cgtaggtcgc cgcgccgggg atgaagccca
     3121 gaggctcgcc cgccgcgccg ctgccgttga tcacaacccg atcaaattcg gtgccgagca
     3181 ccgcgttcag atcgcgccgg attgcagcct ccagaccttc gcctgcctgc ttcagagcct
     3241 tgcggctgat caccatctgc gcgccgccgg tatgatcggg gttcaggctg cgctcggcgg
     3301 tctgatattc cgaagccgcg ccgacattgg cgagttcatt ggtctgccag ccgaagatcg
     3361 cgcccgccgt ggcgacggga aaggccagtt cgcccgaggt gatgttgatg cgctggacgc
     3421 ccaaccgctc ggccacgctg ccgggaaaga tccggtcgat gatcgggcgg atcgtcttgg
     3481 ggttcggcac atcagccgcg acagtctcgc ccgcgcgagt ttcaagcgcg gcgaaaggaa
     3541 cagggatgcc ctgatagccg cccgcgttgc gcagttcctc gacgatctct ttcgtcgccc
     3601 cgttcagcgc ccggccttca tcgagggcga aagccacctg acgcagctcg aagcgcccga
     3661 ccagatcgga ccattcccgg tccgaacggg tttccagatc ggccccggcc tcgcgccgtt
     3721 cctgatcctc ggcagtcagg gccgcacgat aacgggtttc gttggtccga tattcctgat
     3781 ccatgtcgct catggaccgc gtttcgtcct cggtcggctt gtccttgccc accagttccg
     3841 ccagcgcctg ccggatttcc gactggcgac gggcgatttt cacagaatcc agcatgtcat
     3901 tacctcatgt tgccgggttg ggatttgtcg ccagttcggc aacagctttg ccccaggctt
     3961 gacgctcggg ggtgatgatc ggcgcggaat gcccgcactc gatccgggtc tttttcgtgt
     4021 ggcaggacgg gcagcgggtc gcacaattgg ccgggcagaa gcccagatcg gggcgcgtcc
     4081 gcaccggctg gatatggtcg atttccagcc tgccgcgcgt ctgcccgcaa tcgacgcagg
     4141 cccagccgtc gcgttccaga acgacatgcc gcagaacctg ccagcgccgg gttgaggtca
     4201 cgcgctttga atgccggtga tactgacgca tcatgcccat gcgaccctcg ctttccgcgt
     4261 cggagccgcc ttcatgcgct gcccctgcgc gacggccagc agcgttgccg cacgaggtct
     4321 ttgcctgtct gttcctggac agccagcatc gg
//
LOCUS       DTVW01000490            4324 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1591979, whole
            genome shotgun sequence.
ACCESSION   DTVW01000490 DTVW01000000
VERSION     DTVW01000490.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 4324)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4324)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4324
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1591979"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..777)
                     /locus_tag="EYO87_06525"
     CDS             complement(<1..777)
                     /locus_tag="EYO87_06525"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748419.1"
                     /note="with component II, the glutamine amidotransferase,
                     catalyzes the formation of anthranilate from chorismate
                     and glutamine; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate synthase component I"
                     /protein_id="HIC65637.1"
                     /translation="MELSPEFPAFEAGWKSGHNQLVTIRLAADLDTPVSLMLKLAEAA
                     PMSFMLESVTGGEVRGRYSIVGMKPDLIWDCRDGQARINRQARFSDEYQRDDRPALDS
                     LRALISESRIAEMPEDVPPVAAGLFGYLGYDMIRLVEDLPNVNPDPLDLPDAMLMRPS
                     VVAVLDGVKGEVTLCAPAWHDGSDNARAAYARAAERVMDALRSLDRQPSEPRALGHDT
                     KIGEPVSNFAKADYLAAVEKAREYIRAGDIFQVVPSQRWRM"
     gene            complement(777..2732)
                     /locus_tag="EYO87_06530"
     CDS             complement(777..2732)
                     /locus_tag="EYO87_06530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HIC65638.1"
                     /translation="MRTHGKSTIVWLLLGLMVLGLGGFGVTSFSGGSSEIGSVGETKV
                     TAEEYARALRGQMIAIQQQTGQPLTMAQAQSLGLQQSVQAQLFTAAALEEQARRMGVS
                     VGDEAVRQTILGAEAFKGPNGKFDRTAYSQALRRESMAESDFEDEVRKDEARLMIQRA
                     VAGGVVAPQAMVDRAAAWILEARDLSWAELTAEDLPAAIEEPDEKTLKAWHQANADRF
                     TAPEARKITYVWLTPEMMSDQVKLDEAALRAVYDERIDEFQQPERRLVSRLVFPSEAE
                     AKAAKDQIDAGTQPFEAFVIQRGLTMDSIDLGEMTRQQLGAAGDAVFALDGPGVVGPV
                     QTDLGPALFSMNAILDPINISFDEAKPDLRQEAAIDRAQRMIDDNSADYEDMLAGGAT
                     LEEVAQQTPMELGQIDWVAGETPGPGGIDGYQAFRDRAEAVSESDFPEIERLDDGGIF
                     ALRLDEVVPATLKPFEAVRDAVAEDWRLAETRRQLLALAEEEKLRASAAAEPGAEPQP
                     LQGAGGVVQNSGPAPNAAGDNAAADPATQDPAPLEWTSQTGLTRDGWIDNLPRQVVAQ
                     AFALKEPGEIEVVDADERVFLVRLDAVQKADLDSEDARGVKNAIASRMGQSLQDDIFD
                     YYSRAAQRQGGLQINQQAINAINAQVQ"
     gene            complement(2809..3984)
                     /locus_tag="EYO87_06535"
     CDS             complement(2809..3984)
                     /locus_tag="EYO87_06535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase"
                     /protein_id="HIC65639.1"
                     /translation="MMPLNPALAGTFPPPVMEARRWLQDADFPPDRPLINVSQAAPVE
                     PPPQGLCRAIAEAALNRPEAHLYGPVLGNADLRAAVASEFARAYGGRVAPDEVAITQG
                     CNQAFCAAMATLAGQGDEVILPAPWYFNHKMWLDMQGVITRPLPCRQDMLPDPAEAAE
                     LIGPRTKAIVLVTPNNPSGAEYPADLVAAFFDLAQRRGLALVLDETYRDFDSRTGAPH
                     DLLRRAERDQTLIQLYSFSKAYRLTGHRVGAMIASTARLREVEKFLDTVAISTSQLGQ
                     IGALWGIENLRDWLAGERDAILARRAAAVAAMSDLPGWRLKSAGAYFAWVEHPFAESS
                     ADLAPRLVRGAGVLALPGTMFVPRGDAEGARHFRLAFANVDADGIAHLAERLAGFGG"
     gene            complement(3986..4309)
                     /locus_tag="EYO87_06540"
     CDS             complement(3986..4309)
                     /locus_tag="EYO87_06540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65640.1"
                     /translation="MPRMAGAGAQDEAPARPTASQGDAARTAPARPADETAPDAAAVT
                     PAATAESVPQPANVDPAAAGSRSDAADPAVSGESDAVAPSMPQPSLDLSLPPDLSDLR
                     SLERD"
BASE COUNT          683 a         1501 c         1425 g          715 t
ORIGIN      
        1 catccgccag cgttgcgagg gcacgacctg aaagatgtcg cccgcgcgga tgtattccct
       61 ggccttctcg accgccgcca gataatccgc tttggcaaag ttcgacaccg gctcgccgat
      121 cttggtgtcg tggcccaggg cgcgcggctc ggacggttgc cggtccagcg agcgcagggc
      181 atccatcacc cgttcggcgg cgcgggcata ggcggcgcgg gcattgtcgc tgccatcgtg
      241 ccaggcaggc gcgcacagcg tcacctcgcc cttcactccg tccaggaccg cgacgaccga
      301 gggccgcatc agcatcgcgt cgggcagatc cagagggtcg ggattgacgt tcggcagatc
      361 ctcgaccagc cggatcatgt cgtatccgag atagccgaaa aggcccgccg cgaccggggg
      421 cacatcctcg ggcatctcgg cgatccggct ttccgagatc agcgcccgca gactgtccag
      481 cgcgggccgg tcgtcgcgct gatattcgtc ggaaaagcgc gcctggcggt tgatccgcgc
      541 ctggccgtcg cggcaatccc agatcaggtc gggcttcatg ccgacgatgg aataccgtcc
      601 gcggacctcg ccccccgtca ccgattcgag catgaaggac atcggcgcgg cctcggccag
      661 tttcagcatc aggctgaccg gcgtgtccag atcggcggcc agccggatcg tcaccaattg
      721 attatgcccg gatttccagc ccgcctcgaa ggcgggaaat tcaggcgaaa gctccatcac
      781 tggacctgtg cgttgatggc attgatcgcc tgctggttga tctgaagacc gccctgccgt
      841 tgggccgcgc gggaataata gtcgaagatg tcgtcctgca gggactgccc catccgcgat
      901 gcgatggcat tcttcacgcc acgcgcgtcc tcgctgtcca gatcggcctt ctgcaccgcg
      961 tccagacgga ccagaaaaac acgctcatcg gcatcgacga cctcgatctc gccgggttcc
     1021 ttcagggcaa aggcctgtgc aaccacctgc cggggcaggt tgtcgatcca gccgtcgcgc
     1081 gtcagaccgg tctgcgaggt ccattccagc ggtgccggat cctgcgtcgc cggatcagcc
     1141 gcggcattgt ccccggcagc attcggcgcc gggcccgaat tctgcaccac tccgcccgcg
     1201 ccctgcagcg gctgcggttc cgcaccgggt tcggccgccg cgctggccct gagcttttcc
     1261 tcctcggcaa gggccagaag ctgacgcctg gtttcggcaa ggcgccaatc ctcggcgacc
     1321 gcgtcgcgca ccgcctcgaa gggcttcagc gtcgcgggca ccacctcgtc cagacgcagc
     1381 gcgaaaatgc cgccatcatc cagccgttcg atttcgggaa agtcgctttc gctgaccgcc
     1441 tcggcgcggt cgcggaatgc ctgatagccg tcgatgccgc ccgggcccgg cgtctcgccc
     1501 gccacccagt cgatctggcc cagttccatc ggcgtctgct gggcgacctc ttccagcgtc
     1561 gcgccaccgg ccagcatgtc ctcgtaatcg gccgaattat cgtcgatcat gcgttgcgcg
     1621 cggtcgatgg cggcctcctg gcgcagatcg ggcttggcct catcgaagga aatgttgatc
     1681 gggtcgagga tcgcgttcat cgaaaagagg gccggtccca gatcggtctg gaccggaccg
     1741 accacgcccg gtccgtcaag cgcgaaaacc gcgtcgccgg ccgcgccgag ctgctgtctg
     1801 gtcatctcgc ccagatcgat actatccatt gtcaggccgc gctgtatcac gaaggcttcg
     1861 aatggctggg tgcccgcgtc gatctgatcc ttggcggcct ttgcctcggc ctcggacgga
     1921 aagaccagcc ggctgaccag tcgccgctcg ggttgctgga attcgtcgat gcgctcgtca
     1981 tagaccgcgc gcagggccgc ttcgtccagc ttgacctgat ccgacatcat ctcgggggtc
     2041 aaccagacat aggtgatctt gcgcgcctcg ggcgcggtga agcggtcggc attggcctgg
     2101 tgccaggcct tcagcgtctt ttcgtcgggt tcctcgatgg cggcgggaag atcctcggcg
     2161 gtcaactcgg cccaggacag atcgcgtgct tccagaatcc aggcggcggc gcgatccacc
     2221 atggcctggg gcgcgaccac gccgccggcc acggcgcgct gaatcatcag cctggcctcg
     2281 tccttgcgga cctcgtcctc gaagtcgctt tcggccatgc tctcgcgccg caacgcctgg
     2341 gaataggcgg tgcgatcgaa tttgccgttc ggacccttga aggcctccgc gccgaggatc
     2401 gtctggcgaa ctgcctcgtc gccgacggaa acgcccatgc ggcgggcctg ttcctccagc
     2461 gcggcggcgg tgaaaagctg cgcctgaacc gattgctgaa gacccaggga ttgcgcctgt
     2521 gccatggtca gcggctggcc ggtctgctgc tggatcgcga tcatctgccc gcgcaaagcg
     2581 cgcgcatatt cctcggccgt gaccttggtc tcgccgaccg agccgatctc ggacgaaccg
     2641 cccgagaagc tggtcacccc gaagccgccc aggcccagca ccatgaggcc cagaagcaac
     2701 cagacgatcg tggatttacc gtgtgtgcgc aggttcttca tggcccggcc ttccgtcatg
     2761 tcgtgtcgct gccggttcta ggacgcgcgc gcccccgcca caagcctgtc agccgccgaa
     2821 acccgccagt ctttcggcaa gatgggcgat tccgtccgca tcgacattgg cgaaggccag
     2881 gcggaaatgc cgcgcgccct cggcatcgcc gcggggcacg aacatcgtgc cgggaagcgc
     2941 cagcacaccg gccccgcgca ccagccgggg ggccaggtcg gcggaactct cggcgaaggg
     3001 atgttccacc caggcgaaat aggccccggc gcttttcagc cgccagcccg gcagatccga
     3061 cattgccgcc actgccgccg cgcgccgcgc caggatcgca tcgcgttcgc cggccagcca
     3121 gtcgcgcagg ttctcgatcc cccacagggc accgatctgg ccaagctgcg aggtcgagat
     3181 ggccaccgta tcgaggaatt tctcgacctc gcgcagccgc gccgtcgagg cgatcatcgc
     3241 gccgacgcgg tggccggtca gccggtaggc cttggaaaaa ctgtaaagct ggatcagcgt
     3301 ctggtcccgc tctgcgcggc gcagcaggtc atggggggcg ccagtgcggc tgtcgaaatc
     3361 gcgataggtc tcgtcaagca ccagcgccag gccgcgccgc tgcgccagat cgaagaaggc
     3421 cgcgaccaga tccgcgggat attccgcacc cgaaggattg ttcggcgtga ccagcacgat
     3481 ggctttcgtg cggggaccga tcagttctgc ggcctcggcc ggatcgggca acatgtcctg
     3541 gcggcagggc aaggggcgcg tgatcacgcc ctgcatgtcc agccacatct tgtgattgaa
     3601 ataccacggc gccggcagga tcacctcgtc cccctgcccg gccagcgtgg ccattgcggc
     3661 gcagaaggcc tgattgcagc cctgggtgat cgccacctca tccggcgcga cccggccgcc
     3721 ataggcgcgc gcgaattccg acgccacggc ggcgcgcaga tcggcattgc ccaggaccgg
     3781 gccatagaga tgcgcctcgg ggcggttcag cgcggcctcg gcgatggcgc ggcaaagtcc
     3841 ttgcggcggc ggctctaccg gcgcggcctg gctgacattg atcagcggac ggtctggcgg
     3901 gaagtccgca tcctgcaacc agcgccgcgc ctccatcacc ggcggcggaa aggtgcccgc
     3961 aagggcgggg ttcagcggca tcatgtcagt cacgctccag gctgcgcaga tcggaaaggt
     4021 cgggcggcag cgacagatcc agcgacggct gcggcatcga cggcgccacg gcatccgatt
     4081 cgcctgacac ggcaggatcg gcggcatcgg accgggatcc ggccgccgca ggatcgacgt
     4141 tggcgggctg cggcacggac tcggctgtcg cggcaggcgt gacagcggct gcgtccggcg
     4201 cggtttcatc ggctggccgg gcgggcgcag ttcgcgcggc atccccctgc gaggcggtcg
     4261 ggcgggccgg tgcttcgtcc tgcgcgccgg cccccgccat cctgggcacc gctggcgcgg
     4321 cggg
//
LOCUS       DTVW01000491            2834 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1592671, whole
            genome shotgun sequence.
ACCESSION   DTVW01000491 DTVW01000000
VERSION     DTVW01000491.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2834)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2834)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2834
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1592671"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1159
                     /locus_tag="EYO87_06545"
     CDS             <1..1159
                     /locus_tag="EYO87_06545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_354013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="bifunctional folylpolyglutamate
                     synthase/dihydrofolate synthase"
                     /protein_id="HIC65641.1"
                     /translation="RIPPVIHIAGTNGKGSTLAMIRAGLEAGGARVHAYTSPHLARFH
                     ERIRLAGYLIGEPDLAAALRECEAANDGQPITFFEITTAAAFLAFSRTRADYTLLEVV
                     LGGRLDATNVIARPQLTVITPVSIDHTQYLGDTLDLIAAEKAGIIKPRIPCVTGPQPD
                     PALRVIESRASGLTAPLFAHGQHWMIARDRDGMVYQDDHGLWDLPVPNLIGPHQIQNA
                     GTALAALRQLGATDAQALAAVTRAEWPARMQRLTRGPLVEAAGPEAELWLDGGHNPAG
                     AEALAQTLVALPPRPTHLVCGMLNTKDVAGYMRPLSGHAEILTAIDIPGEANTLPAAE
                     TARIAREAGLEAATAADAKDAIARIAAARPRARILICGSLYLAGRVLVQNG"
     gene            complement(1406..2518)
                     /locus_tag="EYO87_06550"
     CDS             complement(1406..2518)
                     /locus_tag="EYO87_06550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapE"
                     /protein_id="HIC65642.1"
                     /translation="MGKVSDLYRQRVAEGRLRPDPAQEAVLPHLDRVLADLGDAGAAP
                     SRPKSAWRAFLGVGHPQQAARPGATGLYLWGGVGRGKSMLMDLIAEAAPERSRRVHFH
                     QFMQEIQDGLNEARKRADQDAVRPVAMQVAREVRLLCFDEMQITDIADAMIVGRLFQL
                     LFDQGVAVVTTSNRVPEDLYKHGLNRQLFLPFIDLIRKRMEVVCLDSDTDYRQGRTTG
                     GPVWFCPADAEARSRMDAIWRDLTDAAAPEPGEIQMKSRRFQIPALAGKVARSDFWSL
                     CGKPLGAADYLELARRIEVLMMDGIPHLSASNYNEAKRFVTLIDAIYEARVRLIASAA
                     DAPEQLYNEGEGSFEFERTASRLREMQDAGWGRVSA"
     gene            2622..>2834
                     /locus_tag="EYO87_06555"
     CDS             2622..>2834
                     /locus_tag="EYO87_06555"
                     /EC_number="3.2.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011749052.1"
                     /note="Enables the cleavage of the glycosidic bond in both
                     5'-methylthioadenosine and S-adenosylhomocysteine; Derived
                     by automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-methylthioadenosine/S-adenosylhomocysteine
                     nucleosidase"
                     /protein_id="HIC65643.1"
                     /translation="MNHPRPDTIAGRPVLFVMAAEAEYGSALRSRIAPLITGVGPVES
                     AVRLTAALAAMTNRPCLIVSLGSAGSA"
BASE COUNT          461 a         1014 c          913 g          446 t
ORIGIN      
        1 ccgcataccg ccggtgatcc acatcgccgg aaccaacggc aagggctcga ccctggcgat
       61 gatccgcgcc gggctcgagg ccgggggcgc gcgagtccat gcctatacct cgccgcatct
      121 ggcgcggttc cacgaacgca tccggctggc gggctatctg atcggcgagc ctgacctggc
      181 cgccgccctg cgcgaatgcg aggcggcgaa tgacggccag ccgatcacct tcttcgagat
      241 cacgacagcc gccgccttcc tggccttttc gcggacgcgc gccgattaca cgctgctcga
      301 ggtcgtcctt ggcggcaggc tggacgccac caacgtgatc gccaggccgc agctgacggt
      361 catcacaccg gtcagcatcg accacacgca atacctgggc gacacgctgg atctgatcgc
      421 cgccgagaag gcaggcatca tcaagccccg catcccctgc gttaccggcc cccagcccga
      481 tcctgcgctg cgcgtgatcg aatcccgcgc ctcgggcctg accgcgccgc ttttcgccca
      541 tggccagcac tggatgatcg cgcgggaccg cgacgggatg gtctatcagg acgatcacgg
      601 gctttgggat ctgccggttc cgaacctgat cggaccacac cagattcaga acgcgggcac
      661 cgccctggcc gccctgcgtc aactgggcgc gaccgatgcc caggcgctgg ccgccgtcac
      721 ccgcgccgaa tggcccgccc ggatgcagcg cctgacccgc ggcccgctgg tcgaggcggc
      781 aggccccgag gccgaactct ggctggatgg cggtcataat ccggcgggcg ctgaggccct
      841 ggcgcagacg ctggtggcac tgccgccgcg gccgacgcat ctggtctgcg ggatgctgaa
      901 caccaaggat gtcgcaggct acatgcggcc gctttccggc catgccgaaa tcctgaccgc
      961 catcgacatt cccggcgagg cgaacaccct gcccgccgcg gaaaccgcgc ggatcgcgcg
     1021 cgaagcggga ctggaggcgg caaccgccgc cgatgcgaag gacgccatcg cccggatcgc
     1081 cgctgcccgg ccacgggcgc ggatcctgat ctgcggatca ttgtatctgg ccgggcgggt
     1141 tcttgtgcag aacggctgag ccggccgcgc tcggcgccgg cggatggcac ggcccggtcg
     1201 aaaccctgac atccggggac gcccgatgga aagttttttc accggccgga cggtcgtgaa
     1261 gacgctgtct ccggtcgggt agccggaatt gctgaagcgc tttccggatc cggcgaccgg
     1321 tcgggagccc gatgatcgcg gcacgcccct tcatccggca tcgcgaccac agccggatgc
     1381 agacgatccg aagtctgccg ggctgctaag ccgaaacccg gccccagccg gcatcctgca
     1441 tctcgcgcag gcggctggcc gtgcgttcga attcgaagct gccctcgcct tcgttataca
     1501 attgctcggg cgcgtcggcg gcactggcga tcagtcgcac gcgggcctcg tagatcgcgt
     1561 cgatcagcgt cacgaagcgc ttggcctcgt tatagttcga agcggacaga tgcggaattc
     1621 cgtccatcat cagcacctcg atccggcggg ccagttccag ataatccgct gcgcccaggg
     1681 gcttgccgca aagcgaccag aaatcagacc gcgcgacctt gcccgcgagg gccggaatct
     1741 ggaaccgccg gcttttcatc tggatctcgc ccggttcggg cgcggcagcg tcggtcaggt
     1801 cgcgccagat cgcgtccatc cgactgcgcg cctcggcatc ggcgggacag aaccagaccg
     1861 gcccgccggt cgtgcggccc tggcggtaat cggtgtcgct gtccaggcag accacctcca
     1921 tccgcttgcg gatcaggtcg atgaaaggca ggaaaagctg tcggttcaac ccgtgcttgt
     1981 agagatcctc gggcacccgg ttcgaggtgg tcacgaccgc cacaccctga tcgaacagca
     2041 gttgaaacag tcgtccgacg atcatcgcat cggcgatatc ggtgatctgc atctcgtcga
     2101 aacacaacag ccggacctcg cgcgcaacct gcattgcgac cgggcgcacc gcgtcctgat
     2161 cggcgcgctt gcgcgcctcg ttcaatccat cctggatctc ttgcatgaac tggtggaaat
     2221 gaacgcggcg gctgcgttcg ggcgccgcct cggcgatcag gtccatcagc atcgacttgc
     2281 cgcgcccgac gccgccccac agataaagcc ccgtcgcgcc cggccgcgcc gcctgctgcg
     2341 gatggcccac gcccagaaag gcgcgccagg ccgatttcgg ccggcttggg gcggcgccgg
     2401 cgtcgcccag atcggccaga acccgatcca gatgcggcag cacggcctct tgcgcgggat
     2461 cgggtctcag ccgcccctcc gccacgcgct gccggtaaag atcgctgacc ttgcccattc
     2521 cagcctgcac ctgccacatt gccggatcgc gccgcaaggc ccttcttgac cgtgatctgc
     2581 cgccatggca cgcattccgc gctgctgcca aggatctgcg catgaaccat ccgcgccctg
     2641 acacgatcgc cggccgaccg gtcctgttcg tgatggcggc cgaggccgaa tacgggtcgg
     2701 cgctgagatc gcgcatcgct ccgctgatca ccggagtcgg tccggtcgaa agcgcggtcc
     2761 gcctgaccgc cgcgctggcc gcgatgacga acaggccgtg cctgatcgtg tcgctgggtt
     2821 cggccgggtc ggcg
//
LOCUS       DTVW01000492            1064 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1594516, whole
            genome shotgun sequence.
ACCESSION   DTVW01000492 DTVW01000000
VERSION     DTVW01000492.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1064)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1064)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1064
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1594516"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..455)
                     /locus_tag="EYO87_06560"
     CDS             complement(<1..455)
                     /locus_tag="EYO87_06560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease"
                     /protein_id="HIC65644.1"
                     /translation="MDCDIIGFQEVFSRDALEALVQELGFKYFETADLAKLSTNNPKK
                     YVTTTVALASKYPISNMQKVKVHTPSLKAHAFEGHFHFSRIPIKATITLPNDKEILVY
                     VAHLKSNRLNAFEHTFKKNDSMEHKKELVFATLGDKHSASLQQRLCEASS"
     gene            complement(733..>1064)
                     /locus_tag="EYO87_06565"
     CDS             complement(733..>1064)
                     /locus_tag="EYO87_06565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008242229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase"
                     /protein_id="HIC65645.1"
                     /translation="EGAKELLATFEEAKALSVRDTAKEAQLVLGQFPIVSSRTANFIN
                     DKVPGISVPKTIIDEMNLASMDGIEKEKDVGFKLSKAIFDDVMKVHGKVHLMTHNRFD
                     LCAALIG"
BASE COUNT          282 a          195 c          201 g          386 t
ORIGIN      
        1 gaagatgcct cacataacct ctgttgcaaa gatgcagaat gtttgtctcc caaggttgca
       61 aagactaatt cttttttatg ttccatgcta tcatttttct taaaggtatg ttcaaaggca
      121 ttgagtctgt tggactttaa gtgagccaca tagaccaaaa tctctttatc attaggcagt
      181 gttatggtag cttttatggg tatgcgtgaa aaatgaaaat gcccttcaaa agcatgtgct
      241 tttagactag gtgtatgtac ctttactttt tgcatgttgc ttatggggta ctttgaggct
      301 agggccacag tggtggtcac gtacttcttt gggttgtttg tacttagttt tgcaaggtct
      361 gccgtctcaa agtatttaaa tcctagctct tgtaccaaag cttccaaggc atcacgtgaa
      421 aacacttctt gaaaccctat gatgtcacag tccattttgt gtatctgttt ttttatccat
      481 agggtttttt cagcccattc atacttattg aacttatctt ttttgctgta ccacgagtag
      541 ggtggctcta caagctggaa gaggttgaag gttcctaggc gtagtttcat ggggtagaca
      601 cactcttact aaattattga tatattcaag gaaaagttgt tagttttaca gtttttcatc
      661 attagattta ttatctattt aaaagatacg taattatgag tgttgaagtt ctttggtaca
      721 tagccttcaa agtcacccaa tcaaggctgc acacaaatca aatcgattat gtgtcatcaa
      781 atgtactttt ccatgtactt tcatcacatc atcaaagata gctttggaaa gtttaaaacc
      841 tacatctttt tctttttcta taccatccat agaagctaaa ttcatttcat ctataatggt
      901 tttaggtaca gatataccag gaactttgtc gtttatgaag ttggcagttc tacttgatac
      961 tataggaaac tgtcctagaa ctagttgtgc ttctttggct gtgtccctga cacttagagc
     1021 ttttgcttct tcgaaggttg ctaaaagctc cttggcacct tcta
//
LOCUS       DTVW01000493            2072 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1594820, whole
            genome shotgun sequence.
ACCESSION   DTVW01000493 DTVW01000000
VERSION     DTVW01000493.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2072)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2072)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2072
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1594820"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..105
                     /locus_tag="EYO87_06570"
     CDS             <1..105
                     /locus_tag="EYO87_06570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009808731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytidine deaminase"
                     /protein_id="HIC65646.1"
                     /translation="TPVIMGTVDGARQTTTIGDLLPGRFDAGHMTRAG"
     gene            102..1388
                     /locus_tag="EYO87_06575"
     CDS             102..1388
                     /locus_tag="EYO87_06575"
                     /EC_number="2.4.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018000835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidine phosphorylase"
                     /protein_id="HIC65647.1"
                     /translation="MTDPRPVIAALRDGRGLDGPGATLIAQGLADGSVSDAQAGAFAM
                     AVLTRGTGEAGRVALTRAMRDSGHVLRWDLPGPVVDKHSTGGIGDTVSLILAPLLAAC
                     GVYVPMISGRGLGHTGGTLDKLEAIPGFVCDQPEDDFRRILRETGCAIVAATGDIAPA
                     DRRLYAIRDESATVGSIDLITASILSKKLAAGLEGLVLDVKAGSGAFLQSPDQARALA
                     QSLVRTANGAGCRCSALITDMDQPLARSAGNALEVAEAIRVLRGEGGALRDLVLELSA
                     EALRLAGQGGDPAAQLDAGAAAEVFGRMVAAQGGPRDLLDRPAAHLPTAPACHPVPAP
                     AGSVDAIDVAALGHAVVALGGGRVRAGDAIDVRVGLSRLAKLGEAVGPDRPLAIVHAA
                     DETAAEIAVAAVAAAYRIGDGIAPGPLIRERLDTDD"
     gene            1381..>2072
                     /locus_tag="EYO87_06580"
     CDS             1381..>2072
                     /locus_tag="EYO87_06580"
                     /EC_number="5.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopentomutase"
                     /protein_id="HIC65648.1"
                     /translation="MTSNRAFLIVMDSAGIGGAPDAARFFNEGRPDTGANTIGHIAQA
                     RPLAMPHLDRLGLGAAIGLASGLTVPGLSAQPQGLWGAATEISVGKDTPSGHWEMAGV
                     PVPWDWHYFPDTQPAFPPAVTARLCQLAGTAGILANCHASGTEVIERFGAEHIRSGWP
                     ICYTSVDSVLQIAAHEQHFGLDRLIALCEGIAPMLHDMRVGRAIARPFLGEAPGRFRR
                     TPNRRDFAIAPPA"
BASE COUNT          281 a          693 c          753 g          345 t
ORIGIN      
        1 acccccgtca tcatgggcac ggtcgacgga gcccgccaga ccaccacgat cggcgatctg
       61 ctgcccggcc gattcgatgc gggccacatg acccgggccg gatgaccgat ccgcgccctg
      121 tcatcgccgc gcttcgggat ggacgcgggc tggatggccc cggcgccacg ctgatcgcgc
      181 aggggctggc ggacggatcc gtcagcgacg cgcaggcagg cgccttcgcg atggcggtcc
      241 tgacccgtgg cacgggcgag gccgggcgcg tggcgctgac ccgcgcgatg cgcgattcgg
      301 ggcatgtgct gcgatgggat ctgccggggc cggtcgtcga caagcattcg accggcggca
      361 tcggcgacac cgtcagcctg atccttgcgc cgctgctggc ggcctgcggg gtctatgtgc
      421 cgatgatctc gggtcgcggg cttggtcaca ccggcggcac gctggacaag ctggaggcga
      481 tccccggctt cgtctgcgac cagcccgagg acgattttcg ccgcatcctg cgtgaaaccg
      541 gctgcgccat cgtcgcggca acgggcgata tcgcgcccgc agaccgcagg ctctacgcga
      601 tccgcgacga atccgcgacg gtcggatcaa tcgacctgat caccgcctcg atcctgtcga
      661 aaaagctggc ggcggggctg gaggggctgg ttctggacgt gaaggccgga tcgggcgcgt
      721 ttctgcaatc acccgatcag gcgagagcct tggcgcaatc gctggtccgc accgccaatg
      781 gcgcgggatg tcgctgttcg gcgctgatta ccgatatgga tcagccgctc gcgcgatcgg
      841 ccggaaacgc gctggaagtg gccgaggcga tccgtgtcct gcgcggcgaa ggcggcgcct
      901 tgcgtgatct ggtgctggaa ttgtcggcag aggccttgcg ccttgccggg caggggggcg
      961 atcctgccgc gcagctggat gcgggcgcgg cggccgaggt ctttggccgc atggtcgcgg
     1021 cgcagggcgg gccgcgcgat ctgctggacc ggcctgcggc gcatttgccg accgcgcctg
     1081 cctgccatcc ggttcctgcg cctgccggtt cggtcgatgc catcgatgtc gcggcgcttg
     1141 gtcatgctgt cgtggcgctt ggcggtggca gggtgcgcgc cggtgatgcg attgatgtgc
     1201 gtgtcggcct gtcgcggctt gccaaactgg gcgaggcggt cggtccggac cggcccctgg
     1261 ccatcgtcca tgccgccgac gaaaccgccg ccgagatcgc cgtcgccgcg gtcgcggccg
     1321 cctaccggat cggggacggg attgcgcccg gtccgctgat ccgcgaaagg ctggacacag
     1381 atgactagca atcgcgcctt tctgatcgtg atggacagcg ccggtatcgg cggcgccccc
     1441 gatgcggcac ggttcttcaa cgaggggcgg cccgataccg gcgcgaacac catcggccat
     1501 atcgcgcagg cccgcccctt ggccatgccg catctggacc gtctggggct tggcgcggcg
     1561 atcgggcttg ccagcggatt gacggtgccg gggctttccg cgcaaccgca gggcctgtgg
     1621 ggcgccgcga ccgagatctc ggtcggcaag gacacgccgt cgggacattg ggaaatggcg
     1681 ggcgtgccgg tgccgtggga ttggcattat tttcccgaca cgcagcccgc ctttccgccg
     1741 gcggtgacgg cacgtttgtg ccaattggcc ggaaccgcgg ggatccttgc caattgccac
     1801 gcctcgggca ccgaggtgat cgagcggttc ggggccgaac atatccgcag cggctggccg
     1861 atctgctata cctcggtcga cagcgtgttg cagatcgcgg cgcatgaaca gcatttcggc
     1921 ctggaccggc tgattgcgct gtgcgaggga atcgccccca tgctgcatga catgcgcgtc
     1981 ggccgcgcca ttgcccggcc gtttctgggc gaggcgccgg gccggttccg ccgcaccccc
     2041 aatcgccgcg acttcgccat cgcgccgccc gc
//
LOCUS       DTVW01000494            1264 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1596517, whole
            genome shotgun sequence.
ACCESSION   DTVW01000494 DTVW01000000
VERSION     DTVW01000494.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1264)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1264)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1264
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1596517"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1046)
                     /locus_tag="EYO87_06585"
     CDS             complement(<1..1046)
                     /locus_tag="EYO87_06585"
                     /inference="COORDINATES: protein motif:HMM:PF01970.14"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter"
                     /protein_id="HIC65649.1"
                     /translation="MIDAFIQVLQPWLLLVAFGGVSLGIIWGALPGLSTTMAMALLIS
                     LSTGLEQSSAIVFMLGVYTGSVFGGAISAVLINIPGTPDAVPTMIEGHALAKRGEGGQ
                     ALGMAIAGSFVGNWVGILLLVAFIPLVLSFALQFRSWEMALLGMIGISICGSMACGAM
                     PLKGWIAGWLGILVALVGFDPIHAVQRYTFGVPELMDGVNYVSVLIGLFGLTEILKVM
                     PSRAQPVVPESVGRVIPSLRKLARYSVAAVRSGVIGAVTGAIPGAGANVASFLSYDIG
                     RRMASPEEKAKWGKGSYEAIVCAEVANNANIGGSMLPTLTLGIPGNAAAAALLAALAL
                     NNIVVGPAIEVDHPG"
BASE COUNT          273 a          437 c          380 g          174 t
ORIGIN      
        1 ccgggatgat ccacctcgat tgccgggccg accacgatgt tgttgagcgc gagcgccgcc
       61 agcagcgccg ccgccgccgc gttgccgggg atgcccagcg tcagcgtggg caacatcgag
      121 ccgccgatat tggcattgtt ggccacttcg gcacagacga ttgcctcata gctgcccttg
      181 ccccatttcg ccttttcctc gggcgaggcc atgcgccgcc cgatgtcgta ggacaggaac
      241 gaggccacat tggcccctgc accgggaatg gcgcccgtca ccgcaccgat cacgcccgag
      301 cgcaccgctg cgaccgagta gcgcgccagc ttgcgcagcg aggggatcac ccggccgacg
      361 gactccggca ccaccggctg cgcgcggctg ggcatgacct tgagaatttc ggtcagcccg
      421 aacagcccga tcagcacaga gacgtagttc accccgtcca tcagttcggg cacaccgaac
      481 gtatagcgct gcaccgcgtg gatcggatca aagcccacca gcgccacgag gatgcccagc
      541 cagccggcga tccagccttt caggggcatc gccccgcagg ccatcgagcc gcagatcgaa
      601 atgccgatca tgcccagcag cgccatttcc cacgagcgga actgcagggc gaagctgaga
      661 accagcggaa tgaaggcgac cagaagcaga attccgaccc agttgcccac gaaggacccg
      721 gcgatcgcca tgcccagtgc ctgcccgccc tcgcctctct tggccagcgc gtggccctcg
      781 atcatcgtgg gcacagcgtc gggggtgccc ggaatgttga tgagcacggc cgagatggca
      841 ccgccgaaca cgctgccggt gtagacaccc agcatgaaga cgatcgcgct ggactgctcc
      901 agccccgtcg aaaggctgat cagcagcgcc atggccatgg tggtcgacag gcccggcagc
      961 gccccccaga taatcccaag gctgaccccg ccgaacgcga caagcagcag ccagggctgc
     1021 agcacctgaa tgaaggcatc aatcatcgcg gatcatcccg gcaaagcgat ctgaaagatg
     1081 ttccggaagg tcatgctgag aaaggcggtc cagccaaacg aaaccgtggc gatgatccac
     1141 agccggccgt tccagaacag catcatcatc gcgctcaggc acaggacggt ggtgatttcg
     1201 aacgccccga cgaccagaaa gacgccggca acatagccac gcagaccaaa ggtcatggaa
     1261 tcca
//
LOCUS       DTVW01000495            2452 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1596919, whole
            genome shotgun sequence.
ACCESSION   DTVW01000495 DTVW01000000
VERSION     DTVW01000495.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2452)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2452)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2452
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1596919"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(102..1025)
                     /locus_tag="EYO87_06590"
     CDS             complement(102..1025)
                     /locus_tag="EYO87_06590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012176777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65650.1"
                     /translation="MPIINAENLDLAFRGFKSIYSTAYLAAPSQAAKVAMTVPSSSRD
                     ESYGWLGQFPQLREWLDGERVVRQLKAHGFTIVNRKFESTVSVSRDDFSDDRLGVFKP
                     MFAEMGHAAALHPDEIVFGLLAQGTTTLCFDGQNFFDTDHPVLDPDGAIVIDGETYSP
                     VSNFDDGAGPTWYLLDTSRAVRPIIWQEREKYEFQNVNRLNDERVFMTDNFLYGIRAR
                     VNAGFGLWQLAHASREALNAANYAAIRAQMQTLTGDQGRPLGIRPNVLVVPPQQEEAA
                     FHLLNTETQDGGGSNPWKGTAEIVVTPYTGG"
     gene            complement(1038..1409)
                     /locus_tag="EYO87_06595"
     CDS             complement(1038..1409)
                     /locus_tag="EYO87_06595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HIC65651.1"
                     /translation="MGMHVPEMLHEMEEDIGADAVRDFLLAHGGREFSIPVRHDLDTL
                     PGRQMTATDWLVLNHGFGRITLPKGPAGHRMRVNFTVLTLRREGRSVGQIATATGIHS
                     RSVSAILKRLTERGLLTQPFT"
     gene            complement(1942..2326)
                     /locus_tag="EYO87_06600"
                     /pseudo
     CDS             complement(1942..2326)
                     /locus_tag="EYO87_06600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011566688.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="regulatory protein GemA"
BASE COUNT          461 a          756 c          790 g          445 t
ORIGIN      
        1 cgcggccgtt gaccgcgccg accggcagaa gatgcaccca gtccggcgcg gtctttgcgg
       61 gaagctcgac ggcctcgcag atcgcggtgc gtccggtcat gtcagccgcc cgtatacggg
      121 gtgacgacga tttcggcggt gcctttccac gggttcgaac cgccgccatc ctgcgtctcg
      181 gtgttcagga ggtggaacgc cgcctcttcc tgctgcggcg gcacgaccag gacattcggg
      241 cggatgccga gcgggcgtcc ctgatcgccg gtcagcgtct gcatctgtgc gcggatcgcg
      301 gcatagttgg ccgcgttcag ggcttcgcgg ctggcatggg ccaactgcca caggccgaag
      361 cccgcattca cccgtgcccg gatgccgtaa aggaagttgt cggtcatgaa gacgcgctcg
      421 tcattcagcc ggttgacgtt ctggaactcg tatttctcgc gctcctgcca gatgatcggc
      481 cggacggcgc gcgaggtatc cagaagatac caggtcggcc cggcgccatc gtcgaaattg
      541 ctgaccggcg aataggtctc gccgtcgatc acaatggcgc cgtccggatc gaggaccggg
      601 tggtcggtat cgaagaagtt ctggccgtcg aagcacaggg tcgtggtgcc ctgcgccagc
      661 aatccaaaga cgatttcgtc gggatgaagc gcggcggcat gccccatctc ggcgaacatc
      721 ggcttgaaga cgccgagccg gtcatccgag aaatcgtcgc gcgagaccga aaccgtgctt
      781 tcgaacttgc ggttcacgat ggtgaagcca tgagccttca gctggcgcac gacgcgctcg
      841 ccgtccagcc attcccgcaa ctgcgggaac tgccccagcc agccatagct ttcgtcgcgc
      901 gagctgctgg gcaccgtcat cgcgaccttc gcggcctgac tgggcgcggc gaggtaggcc
      961 gtggagtaga tcgacttgaa accccggaag gcaaggtcga gattttcagc gttgatgatg
     1021 ggcatgtctg gggtccgtca ggtgaagggt tgtgtcagaa ggccgcgttc ggtcaggcgc
     1081 ttcaggatcg ccgagacgct gcgggaatgg atgccggtcg cggtcgcgat ctgcccgacg
     1141 ctgcggcctt cccggcgaag cgtcaggacg gtgaaattga cccgcatgcg atgcccggcc
     1201 ggccctttcg gcagcgtaat ccggccgaag ccatggttga gcaccagcca gtcggtggcc
     1261 gtcatttgcc gtccgggcag cgtgtcaagg tcgtgacgca cggggatcga gaattcccgc
     1321 ccgccatgcg caagaaggaa gtcgcgcacg gcatccgcgc cgatatcttc ctccatctcg
     1381 tgcagcatct cgggcacatg catgcccatg gctgcgcagt cggcgcagga aggaacgaga
     1441 agatgcggtg tcgggtcgat tgccatggct caaacctatg gcaaccctga ataccttcct
     1501 tccctgaatg ggttcagggg gtaacgcctt aagggccaga cagatccctc acggcacatg
     1561 atcggctttc cgaaaatggc tcaggcgtca aaggaaatct agcgctggcc gcgaccgttc
     1621 gcaagcgtgg cggggtgtga acccgggggg ccagagacat cccccacggc acatgaccgg
     1681 ctctctgaaa atggctcagg ctcacacgat catatcgcag gatcgctacc gattttcaag
     1741 tccgatgggc tgaacacctc ggcagtggcc gtcaggcttc gccgttaaac ggtgtttaga
     1801 ataggcagga cgggcgcgaa agggttaggc gctgaacagg tagccggaaa acagcaaagc
     1861 ctgtcagcgg gcgaatcagc gcctctcacg aaaaagggca gcgcaagccg cgcggccctt
     1921 ccattgccgt gtttcggagt gtcacgccgc gcgggaccgt gccttcatcg ccttcagcgc
     1981 cgtgatggcc ttcggggcgg ccgcagcggt caggaaccgc agcgacgata tcttgaagca
     2041 gcattccagc catctgttca gctcggcctc tccggtagct gccaagggta tattcgcgcc
     2101 acaacgcccg gatcagcttg atctgggcaa agctcgccat gcctggtcgc gcgccatagc
     2161 ttggtccttg cgaaaccagc ggccgaaagc ccaggtattc gaagagaccc atcatcgcct
     2221 cgaagccgtc cccgtccagt tcggtcaatc tggtgacgcc cgcgatttgg gccagcgcgg
     2281 ttcgatatgt gttccatccc ggatgatcac atagaccctc gccgatccac ccttttcatg
     2341 gcaaggtcga ttctgcgcga ggttcgggag ggggtgggag catgctgatc tctctgcaca
     2401 ggcaggccac cacgacaccg aagatccggg ccgcaatcca ggggagcacg ga
//
LOCUS       DTVW01000496            5768 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1597106, whole
            genome shotgun sequence.
ACCESSION   DTVW01000496 DTVW01000000
VERSION     DTVW01000496.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 5768)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5768)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5768
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1597106"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..503)
                     /locus_tag="EYO87_06605"
     CDS             complement(<1..503)
                     /locus_tag="EYO87_06605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008887918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HIC65652.1"
                     /translation="MTGNPILEIKALHKRFGDHHVLKGIDFTVEPGERVAIIGGSGSG
                     KSTFLRCINFMETLSAGEIWLDGTRIGVERKGTVTYPDKQLCQVRERLGMVFQQFNLF
                     PHMSVLGNVMEGLVTVKGMAKAEARRIAEAELAKVGLSDKLDAWPGRLSGGQQQRVAI
                     ARSLAMNP"
     gene            complement(521..1186)
                     /locus_tag="EYO87_06610"
     CDS             complement(521..1186)
                     /locus_tag="EYO87_06610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008887890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HIC65653.1"
                     /translation="MTYVPDFSIVTDNWIVLLRGLWVTIQIWIPSIAIGLAGGLLLAQ
                     ARLGRSGWIRGTSLVYVELFRDTPVLIQLIWFYYAFPILVGVQLTPYAAALLGLILNT
                     SAYASEIFRGGIRSIHRGQMEGALAIGMSRTQAMRRVILPQVIKRMLPALTNRTIEVA
                     KMSSLASVISVHELMYQGRLLSSTYYRPFEILTAVAFIYFVLIYPGTFLAGRLEKHLA
                     RSN"
     gene            complement(1197..1862)
                     /locus_tag="EYO87_06615"
     CDS             complement(1197..1862)
                     /locus_tag="EYO87_06615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008887895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HIC65654.1"
                     /translation="MDYSWDFGPVLARFDMLALGLLNTIKIAAVSIALGVLVGLVLAM
                     MRLSPRKWLGIPALSFIEFYRNTPPIVHFFWFFYALPVLLSISLNPYVAAVLALSTQS
                     GAFYAEVFRGGIVSVERGQWEGGRALGMTHAALMRRVIVPQAIARMVPPFIERSFELL
                     KTTALASTLAYADLLYQAMMVNSETFRPLEVYTIIALMYLVLLLTASQLARLAEARLT
                     AYQ"
     gene            complement(1929..2750)
                     /locus_tag="EYO87_06620"
     CDS             complement(1929..2750)
                     /locus_tag="EYO87_06620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008888011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HIC65655.1"
                     /translation="MKRRLLILAATVALTLAPMARAQDSGTMAQVKESGELRIGVASA
                     EPWFYKDPMSEQWTGVGVAMGRRMADKLGVTMIPVETSWANAVAGLQANQFDIMFVLD
                     PTEERKKALAFPENPLFYYAMGALVREDSAAKTWVELDTPETRIGVTLGTSLDRNVTE
                     MMTKARINRFSSNDEAIAAFAAGRVDAVVQFHPALVVQYSRLKMGKVLLPEPVNPVAT
                     SAGMRQEDSSDFLDWVNATVADLYAAGVPDELFRAYLASKDIDPEGIPGLVKEDW"
     gene            complement(2747..3439)
                     /locus_tag="EYO87_06625"
     CDS             complement(2747..3439)
                     /locus_tag="EYO87_06625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008887946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HIC65656.1"
                     /translation="MTGLIKRETMGAQLASLLRGAILSGEFEPGEPVTETALALRFGV
                     SRGPMREAMRHLVDEGLLVTVPYTGTRVLQLTSTDIEDIYSMRICLEVFAFEQIWERR
                     DEAFRQSLMVRHAALLKAIDARDDIRSIDAELDLHGLAYEVCGNGILLSSWSGIRARL
                     QLYWAAHHRAHGITGPKRESHDDYVRFALGDSRERMKEEIRDHMRRGLDKTMAFVFSI
                     EAVKAKSNRREK"
     gene            3593..4372
                     /locus_tag="EYO87_06630"
     CDS             3593..4372
                     /locus_tag="EYO87_06630"
                     /inference="COORDINATES: protein motif:HMM:PF09339.8"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65657.1"
                     /translation="MSENLNRTLILLEHLSAAKRSGVTVAQLIEQTGLASSTVYRIAQ
                     ELETLGYVLKSSDRRLFPKFQFEQGMSFGGIEIGHLSAACQSVSADLVAASEFIALRK
                     ETLFWHVAEAHPMQSIRLRAGVGFVRATYELDCITRMALAHRQRAEVEANWDVTGFYE
                     VGVSGRKVPWDEAQEKIFTVDTADMQFDLMGNAKGVRRFCVAIHGEQGEFAGLLTAAE
                     AATPVRDVDAHVAKVQRVLMGAKSAVENGTDTSRPKQMQQV"
     gene            4398..5666
                     /locus_tag="EYO87_06635"
     CDS             4398..5666
                     /locus_tag="EYO87_06635"
                     /inference="COORDINATES: protein motif:HMM:PF13416.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HIC65658.1"
                     /translation="MKFAMKGAVAVATALTLIAPLAAGAQELVMSIGSRGYGGMMERN
                     IEAFEAANPGTSVEWLKVSDVPGDSRKLYVTGLTAKSPTPDVFAIDVIWAGEFAQRGW
                     LEPLNNYLGKDAIAAYNPSFLSAATIDGTVFAAPLYVDGTHLFYRSDLLEKYGIAVPK
                     TWEEVIAASKTVMEGEGNPQLYGFVSMWAKIEGLFMNWLSFTGGNGATFFDADGEVAV
                     NSPESIAATQTMVDMIYKDRIVPDSILTMKPDDARTLFQQGRAVFLMVQDFVYAPLSA
                     ADSPVADKFDFTRNPYFEGHPDAKSTAMGGWLLAVNANSENKEAAAKLVEYFTSYDAQ
                     LAAALDENRAPGRTDVYDAPEMADATLLKKLGDDYAVGVVRPSASTGNLYPRVSEVMQ
                     TEITNALHREKTVEQALNDAAAEINSILGK"
BASE COUNT         1177 a         1716 c         1816 g         1059 t
ORIGIN      
        1 gggttcatgg ccagcgagcg ggcgatggcg acgcgctgct gctggccgcc ggaaaggcgc
       61 ccgggccagg cgtcgagctt atccgacagg ccgaccttgg ccagttcggc ctcggcgatc
      121 ctgcgggcct cggctttcgc catgcccttg accgtcacaa gtccctccat gacgttgccc
      181 aggacgctca tgtgaggaaa gagattgaac tgctgaaaca ccatgcccag ccgctcgcgc
      241 acctggcaga gctgtttatc gggataggtg acggtccctt tccgctcgac gccgatgcgg
      301 gtgccatcca gccagatctc ccccgcgctc agcgtctcca tgaaatttat gcagcgcagg
      361 aaggtggact tgcccgagcc cgaaccgccg atgatcgcga cgcgttcgcc cggctcgacg
      421 gtgaaatcga ttcccttgag aacgtgatgg tcgccgaacc gcttgtgcag ggccttgatt
      481 tccagaatgg gattgccggt catgcgagtt ccttttcagg tcagttggac cgcgccaggt
      541 gcttttcgag acgcccggca aggaaggtgc cgggatagat cagaacaaag tagatgaagg
      601 ccaccgccgt caggatctcg aagggtcgat aataggtcga tgagagcaga cgtccctggt
      661 acatcagttc gtgcaccgag atcaccgagg caagcgagga catcttggcc acctcgatcg
      721 tccggttggt cagggccggc agcatgcgct tgatgacctg cggcaggatt acccggcgca
      781 tggcctgggt tcgggacatg ccgatggcaa gcgcgccctc catctggccg cgatggatcg
      841 acctgatgcc gccccggaaa atctccgagg cataggccga ggtattcagg atcagtccca
      901 gcagtgccgc cgcatagggg gtcagctgca cgccgacgag gatcgggaag gcgtagtaga
      961 accagatcag ctggatcagg accggggtat cccggaaaag ctctacatag acaagactcg
     1021 tgccgcggat ccagccgctg cggcccagcc gcgcctgcgc aagcagcagg ccgcccgcaa
     1081 ggccgatggc gatggacggg atccagatct ggatggtgac ccagagcccg cgcaacagga
     1141 cgatccagtt gtcggtgacg atgctgaaat cgggaacgta ggtcatcgcc gggttctcac
     1201 tgataggccg tcagccgggc ttcggcgagc cgcgccaact ggctggcggt caacagcagc
     1261 acgaggtaca tcagcgcgat gatcgtatag acctcgagcg gacggaaggt ctcggagttc
     1321 accatcatcg cctggtagag caggtcggca taggcaagtg tcgaggccag cgcggtggtc
     1381 ttcaacaatt cgaagctgcg ctcgatgaag ggcggaacca tgcgggcgat ggcctgcggt
     1441 acgatcacgc ggcgcatcag cgccgcatgg gtcatgccga gcgcgcgccc gccttcccat
     1501 tgcccgcgct cgacggagac gatcccgccc cggaaaacct cggcgtaaaa tgctccggac
     1561 tgggtcgaca gcgccagcac ggcggcgaca tagggattga ggctgatcga aagcagcacc
     1621 ggcagcgcat agaagaacca gaagaaatga acgatcggtg gcgtgttgcg atagaattcg
     1681 atgaaggaaa gcgccggaat gcccagccac ttgcgcggcg agagacgcat catcgccagg
     1741 acgaggccga ccagaacgcc cagtgcgatc gagaccgcgg cgatcttgat cgtgttcaac
     1801 agtcccagtg cgagcatgtc gaaacgcgcc agaaccgggc cgaaatccca ggaataatcc
     1861 atgtcacggc tttcgctaga tcggatgggg cgcggacctg acgccgggct acaggtccgg
     1921 gcagaacctt accagtcttc cttgaccagg ccgggaatcc cttcgggatc gatgtccttg
     1981 ctggcaagat aggcacggaa aagctcgtcc ggcacaccgg cggcgtagag atcggcgacg
     2041 gtggcgttca cccagtcgag gaaatcgctg ctgtcttcct ggcgcatccc ggccgaggtg
     2101 gcgaccgggt tcaccggctc tggcagcagc accttgccca tcttcaaccg ggaatactgc
     2161 acgacgaggg ctgggtgaaa ctggacgacg gcgtccacac ggcctgcggc aaatgccgcg
     2221 atggcctcgt cgttggacga gaagcggttg atccgggcct ttgtcatcat ttcggtcacg
     2281 ttgcggtcca gcgaggtgcc gagtgtgacg ccgatgcgcg tttcgggcgt gtcgagttca
     2341 acccaggtct tcgccgccga gtcctcgcgg accaacgcgc ccatggcata atagaacagc
     2401 gggttttccg ggaatgcgag ggccttcttg cgctcttccg tggggtcgag cacgaacatg
     2461 atgtcgaact ggtttgcctg caatcccgcg acggcattgg cccatgaggt ctcgaccggg
     2521 atcatcgtca cgccaagctt gtcggccatc cgcctgccca tggcgacacc aacacctgtc
     2581 cattgctctg acatcggatc cttgtagaac cagggctcgg cggaggcgac gccgatacgc
     2641 agctcgcccg attccttgac ctgtgccatg gtaccgctgt cctgtgcccg ggccatcggg
     2701 gcgagggtca atgcaaccgt ggcggcgaga ataagcagac gtcttttcat ttctctctcc
     2761 tgttggattt ggccttcacc gcttcaatcg agaagacgaa ggccatggtc ttgtccagcc
     2821 cgcggcgcat gtggtcgcgg atctcttcct tcatccgctc gcggctgtct cccagagcga
     2881 agcggacata gtcgtcgtgg ctttcccgtt tcgggccggt gatgccgtgg gcacggtgat
     2941 gcgccgccca gtagagctgc agacgagcgc ggataccgct ccagctcgac aacaggatgc
     3001 cgttgccgca aacctcgtag gcaaggccgt gaaggtccag ttcagcgtcg atggagcgga
     3061 tgtcatcgcg cgcgtcgatc gccttgagca gcgccgcgtg ccgcaccatg agggattgcc
     3121 ggaaagcttc gtccctgcgt tcccagattt gttcgaaggc gaagacctcg aggcagatcc
     3181 gcatggaata gatatcctcg atatccgtcg aggtcagttg caggacgcgc gtgccggtgt
     3241 agggaacggt cacgagaaga ccctcatcga caagatgccg catcgcctct cgcatgggtc
     3301 cgcggcttac cccgaaacgc agggccaggg cagtctcggt caccggctcg ccgggctcga
     3361 attctcccga aaggatcgca ccgcgcaaca gactggcaag ctgggcgccc atcgtttcgc
     3421 gcttgatcaa cccggtcatc agaaatcttt ccgccgcttc ctaatgtaga ttgtctacaa
     3481 tgatgcgtta gcccatgcaa gcattcctcg ggggtccatt gcttgtgttc cggcgaggtc
     3541 gattgactta tctcaaaaaa gggaataaaa attcccaaaa cagggaatac tgatgagcga
     3601 aaacctcaac cgaacgttga tcttgctgga acatctgtcg gccgcaaaac ggtcaggcgt
     3661 gacggttgcg caattgatcg aacaaaccgg tctggccagt tcgaccgtct atcgcattgc
     3721 ccaggagcta gagacgctgg gctatgtgct gaaatccagc gatcgccgcc tgtttccgaa
     3781 attccagttc gagcagggca tgagcttcgg cggcatcgag atcggccatc tgtccgcggc
     3841 atgtcagagc gtcagcgccg atctggtcgc cgcatccgaa ttcatcgccc tgcgcaagga
     3901 aacgctgttc tggcacgtcg ccgaggccca tcccatgcag tccatccggc tgcgcgccgg
     3961 ggtcggattc gtgcgcgcca cctatgaact ggactgcata acgcggatgg ctcttgcgca
     4021 taggcaacgg gccgaggttg aggcgaactg ggacgtcacc ggtttttacg aggtcggtgt
     4081 ttccggcaga aaggtgccgt gggacgaagc gcaagagaaa atcttcacag tcgatacggc
     4141 ggacatgcag ttcgatctga tgggcaatgc caagggcgtc cggcgttttt gcgtggccat
     4201 ccatggtgag cagggggagt tcgccggatt gttgaccgcc gcagaggcgg cgacgcccgt
     4261 ccgtgacgtt gacgcgcatg tggcaaaggt ccagcgggtt ctgatgggcg cgaaatctgc
     4321 tgtcgagaac ggcaccgaca cgtcgagacc gaagcagatg caacaggtct agccaaacga
     4381 tagtcaggga ggaaatcatg aaattcgcaa tgaagggtgc agtcgccgtg gcgactgcgc
     4441 tgaccttgat cgcgccgctt gcggccgggg cgcaggagct ggtcatgtcg atcgggtcgc
     4501 gcggctatgg cggcatgatg gaacgcaata tcgaggcatt cgaggccgcc aatcccggca
     4561 cctccgtcga atggctgaaa gtgtcggacg tcccgggcga cagccgcaag ctttatgtga
     4621 cgggcctgac cgcgaaaagc ccgacaccgg acgtgttcgc gatcgacgtc atctgggcgg
     4681 gtgaattcgc gcagcgcggc tggcttgaac cgctgaacaa ctatctggga aaggacgcga
     4741 ttgcggcata caacccgtct ttcctgtccg ccgccacgat cgacggcacg gtgtttgccg
     4801 ccccgcttta tgtcgatggc acccatcttt tctaccgatc cgacctgctg gagaaatacg
     4861 gaattgcggt gccgaagacc tgggaagagg tcatcgcggc gtccaagacc gtcatggaag
     4921 gcgaaggcaa tccgcagctt tacggctttg tgtccatgtg ggccaagatc gaggggctgt
     4981 tcatgaactg gctttcgttc acgggcggca acggcgcgac cttctttgat gctgatggcg
     5041 aggtcgccgt caactcgccc gaatccatcg ccgcgaccca gaccatggtc gacatgatct
     5101 acaaggacag gatcgttccg gattcgatcc tgacgatgaa gcccgacgat gcccggacgc
     5161 tgttccagca aggtcgcgcg gtgttcctga tggtgcagga tttcgtctat gcaccgctga
     5221 gcgccgctga cagccccgtg gccgacaagt tcgatttcac ccgcaacccc tacttcgagg
     5281 ggcatcccga cgctaaatcc acggcgatgg gcggttggct tctggcagtc aacgcaaatt
     5341 ccgaaaacaa ggaagccgcg gcgaagctgg tggaatactt cacttcctac gacgcgcaat
     5401 tggccgcagc acttgacgaa aaccgggcgc cgggccgaac cgacgtttac gatgcgccgg
     5461 aaatggcgga tgcgactttg ctcaagaagc tgggcgatga ttacgcggtc ggcgtcgtgc
     5521 gtccatccgc atcgacgggc aatctctacc cgcgcgtatc cgaggtgatg cagaccgaaa
     5581 tcaccaacgc gctgcaccgc gagaaaacgg tggagcaggc tttgaatgac gccgccgccg
     5641 agatcaattc catcctgggc aagtaggtca ccgaccctgc gcgtctgcct tgccgcgcgg
     5701 ggcctttcaa aagaaatggg ccggacatga accgcaccat gaatctggaa cagcgcacgg
     5761 cgctgacc
//
LOCUS       DTVW01000497            3101 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1598229, whole
            genome shotgun sequence.
ACCESSION   DTVW01000497 DTVW01000000
VERSION     DTVW01000497.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3101)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3101)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3101
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1598229"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..2604)
                     /locus_tag="EYO87_06640"
     CDS             complement(<1..2604)
                     /locus_tag="EYO87_06640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007198988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HIC65659.1"
                     /translation="MNRFNLSDWALHHRSFVWFLLIVSMLAGTLSYLALGREEDPNFT
                     IKTMVVGAALPGASIEETRDQVTARIEKKLEELDALDFTRSVTTPGQSVVYVELLPTT
                     RGPAVPEIWQQVRRMMSDIRADFPDEFAGFQFNDDFGDVYGNIYAFTADGFSPREMRD
                     RVEAIRRQVAALDASGKVDLLGEQDEQIFLEFSTARLAAMGLSQQQVLNSLATQNAIV
                     PSGVIEAGPERVLVRVGGQFDDASAIGAVNLRVGERFFNVADVATVTRGYEDPPRTLF
                     RYRGKPAIGLQIGMREGQNILEFGKELDALMDRVAADLPIGIEMAKVADQPLVVDQAV
                     GHFVKALAEAVFIVLIVSFISLGFRAGFVVTMTIPLVLAITFVILEIYGITLQRISLG
                     ALIIALGLLVDDAMIAIETMISRLEIGESLEKAASYAWTSIAFPMLTGTLVTVAGFIP
                     IGLNDSAAGEFTFSLFVVIAVSLVVSWIVAVLFAPLLGVTFLTTRIARHDARPGRLRR
                     GFHVLLRLAMRFRWLTIAITLALFAVSVFGMRFVEQQFFPTSDRTEVLVDVTERQNAS
                     ITKTIADMDRLEATLEGDQDVSFWTSYIGRGAPRFVLSMDVPTPGPHMGQIVIQTPDL
                     AARDRVKARLNRLAAEEFAGVDIYVKNLEIGPPVGKPVQYRVSGADVDSVRDAARGLA
                     TVMATEPRLRDIALDWNEPARVVRLEVDQEQARRLGVTSQDISSSLSAVFSGKTVTQL
                     RDGIFLVDVIARGNEADRNSINSIRNLQLLNGTGRNLPLTALVSLDFDTEQPLIQQRN
                     GLPTITVKAAINGKDQPATLVEALAGRIADYAAGLPPTIDIAVGGTVESSGDSQAPIA
                     AVVPVMLLIIAV"
BASE COUNT          568 a         1061 c          979 g          493 t
ORIGIN      
        1 caccgcgatg atcagcagca tgaccggcac caccgcggcg atgggcgcct gactgtcgcc
       61 cgagctttcg acggttccgc cgacggcgat gtcgattgtt ggcggcaggc cggccgcgta
      121 atccgcgatc cggccggcca gggcctcgac cagggtcgcg ggctgatcct tgccgttgat
      181 cgccgccttg acggtgatcg ttggcaggcc gttgcgctgc tggatcagcg gctgttcggt
      241 gtcgaaatca agactgacca gggccgtaag cggcaggttc cggccggtgc cgttcagcaa
      301 ttgcagattg cggatcgaat tgatggaatt gcggtcggct tcgtttccgc gcgcgatcac
      361 atcgacgagg aagatcccgt cgcgcaactg ggtgacggtc ttgccggaaa acaccgccga
      421 cagcgacgag gaaatatcct gactggtcac gcccagacgc cgcgcctgtt cctgatcgac
      481 ctccagccgg acgacccgcg caggctcgtt ccagtccagc gcgatatcgc gcaggcgcgg
      541 ctcggtcgcc atcacggtgg ccagcccgcg cgcggcatcg cgcaccgaat cgacatcggc
      601 accgctgacg cgatattgca ccggcttgcc gaccggcggc ccgatttcga ggttcttcac
      661 atagatgtcg acaccggcga attcctcggc ggccagccgg ttcagccgcg ccttgacccg
      721 gtcgcgggcg gccaggtcgg gggtctggat cacgatctgg cccatatgcg gtcccggcgt
      781 cggcacgtcc atcgacagca cgaaacgcgg cgccccccgg ccgatgtaag aggtccagaa
      841 cgacacgtcc tgatcgcctt ccagcgtcgc ttccagccgg tccatgtcgg cgatggtctt
      901 tgtgatcgag gcgttctggc gttcggtcac gtccaccaga acctcggtcc ggtccgaggt
      961 cggaaagaat tgctgctcga cgaagcgcat tccgaagacc gataccgcga acagcgccag
     1021 cgtgatcgcg atggtcagcc agcggaaccg catcgccagc cgcaacagca cgtgaaagcc
     1081 gcgccgcagc cgaccgggcc gggcgtcgtg gcgggcgatc cgggtggtca ggaaggtgac
     1141 gcccagaagc ggcgcgaaca gcaccgccac gatccacgag acgaccagcg acaccgcgat
     1201 caccacgaac aacgagaagg taaactcccc ggcggctgaa tcgttcagtc ctatgggaat
     1261 gaaaccggcc accgtcacca gcgtcccggt cagcatcgga aaggcgatcg acgtccaggc
     1321 atagcttgcc gccttttcca gcgattctcc gatttccagc cgcgagatca tcgtttcgat
     1381 ggcgatcatg gcatcgtcca ccagcaggcc aagcgcgatg atcagcgcgc ccagcgaaat
     1441 ccgctgaagc gtgattccat aaatctccag gatcacgaag gtgattgcca gaaccagcgg
     1501 gatcgtcatc gtcacgacga aaccggcacg gaagcccagg ctgatgaaac tgacgatcag
     1561 aacgatgaac accgcctcgg ccagggcctt gacgaagtga ccgaccgcct ggtcgacgac
     1621 caggggctgg tcggcgacct tggccatctc gattccgatc ggcaggtcgg ccgcgacgcg
     1681 atccatcagc gcatccagct ccttgccgaa ttcaaggatg ttctggccct cgcgcatccc
     1741 gatctgcaag ccgatggcgg gcttgccacg atagcggaac agggtccggg gcgggtcctc
     1801 gtagccccgc gtcaccgtcg ccacatcggc gacgttgaag aaccgctcgc ccacgcgcag
     1861 gttcaccgca ccgatcgccg aggcgtcgtc gaactgcccg cccacgcgga ccagcacccg
     1921 ctcgggcccg gcctcgatca cgcccgaggg cacgatggcg ttctgcgtgg ccagagaatt
     1981 cagcacctgc tgctggctca ggcccatcgc ggccagccgc gcggtcgaga attccagaaa
     2041 gatctgttcg tcctgctcgc ccagaagatc gaccttgccc gaggcatcca gcgcggcgac
     2101 ctgcctgcgg atcgcctcga cccggtcgcg catctcgcgc gggctgaaac cgtcggcggt
     2161 aaaggcatag atgttgccat agacatcgcc gaaatcgtcg ttgaactgga accccgcgaa
     2221 ttcatcggga aaatcggcgc ggatatcgga catcatccgc cgcacctgct gccagatttc
     2281 gggaacggcg ggtccgcgcg tcgtcggcag cagttccaca tagacgaccg attgtcccgg
     2341 cgtcgtgacc gagcgggtaa aatccagcgc gtccagttcc tccagcttct tctcgatccg
     2401 cgcggtgacc tgatcgcgcg tctcctcgat cgaggcgccg ggcagggcgg ccccgaccac
     2461 catggtcttg atggtgaagt tcggatcttc ctcgcgaccc agggcaagat agctgagcgt
     2521 gcccgccagc atggaaacga tcagcaggaa ccagacgaag ctgcggtgat gcagcgccca
     2581 gtcggacaga ttgaagcggt tcacggatcg accctccgcc ccacggcctg accatcgctc
     2641 agcgaccgca cgccgcggat cacgatttca tcgccaagat tcagaccgcc ggtgaccagc
     2701 acccgcccca tcagcgtggc gccggtcccg atcgccaccg cctcgacgcg accgggcccg
     2761 gacgggccct tcccatcctc gcggatcacg cgccagacat ggggactggc gtcgcggtcg
     2821 aagacggcct gttcggggat ggtcagcgcc ggatcgcgcg cgctgcccag ccgcgcccgg
     2881 atcagcgcgc ccagccgcag cgtcgtgtcc ggcggcagcg tcagatacag cctgcgcgtt
     2941 cgcgtcgcgg tatcggccag cgggtcgatg cggttcagga tcgccggcac ctcgctgccg
     3001 ggatcgccgc gctgccagat ggtgaagacg gcatcgggcg gcaacccggc cagcgccggt
     3061 tccggcaggt cgatgaccgc ctctcgttcg tcttcggccg a
//
LOCUS       DTVW01000498            2512 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1598872, whole
            genome shotgun sequence.
ACCESSION   DTVW01000498 DTVW01000000
VERSION     DTVW01000498.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2512)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2512)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2512
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1598872"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(44..544)
                     /locus_tag="EYO87_06645"
     CDS             complement(44..544)
                     /locus_tag="EYO87_06645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010394040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PaaI family thioesterase"
                     /protein_id="HIC65660.1"
                     /translation="MMDRNEPLDQIKTRRDSALRALATGVPYMTWLGIRFDRRGDELT
                     AILPFDDKLIGNPALPAIHGGVTAAFLEVTAIIELSWSAMWEDLESGRIAPDAAVPDS
                     LPRLPKTIGFTVDYLRSGLPRDAYARARVVRSGRRYASVHVEAWQDNRARLMAQATGH
                     FLMPQP"
     gene            complement(541..993)
                     /locus_tag="EYO87_06650"
     CDS             complement(541..993)
                     /locus_tag="EYO87_06650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PaaI family thioesterase"
                     /protein_id="HIC65661.1"
                     /translation="MTDESGGLDSGDRARIAQQFIDSIPHARALGMRVDDLGEGRATI
                     SMPWSEHLVGDPRTGIVHGGVVSALMDTCCGAAVMTHPSSPRSTATIDLRIDYMRGAA
                     PGQRITARAECYHMTRSVAFLRAVALDEDGDNPVATAAGTFTAERQAR"
     gene            1136..1516
                     /locus_tag="EYO87_06655"
     CDS             1136..1516
                     /locus_tag="EYO87_06655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008027808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HIC65662.1"
                     /translation="MAEEQTISFKDMCARFDVTPRTLRYYEYIELLSPRKEGRARFYG
                     AREIARMTLILRGRRFGFSLEDIRQWLLIYEQKGSRQQYEVWLDLADRQLGVLDRQIA
                     DLQAARQDLAELRETAAAELKTMK"
     gene            1605..2003
                     /locus_tag="EYO87_06660"
     CDS             1605..2003
                     /locus_tag="EYO87_06660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011909252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HIC65663.1"
                     /translation="MSEKLMTIRQMCEAFGVTPRTLRFYEARELIFPERRGQHRLYDR
                     RDRARLTLILRGKRFGFSLEQIRQLLELYQPGGANRTQIAATIGIARERLSDMETQYA
                     ELSEAIADLRQQLADAEDRLAAAPRDTSRG"
     gene            2008..>2512
                     /locus_tag="EYO87_06665"
     CDS             2008..>2512
                     /locus_tag="EYO87_06665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
                     /protein_id="HIC65664.1"
                     /translation="MPIYTPPVRDLQFGLHDVLKIQQSGLPGHDELDRDFTEAVLDAA
                     GKLSTEVLAPLNMVGDRQGCRLENGVVRTPDGFKAAFEQMKEGGWTALDCDPEYGGQG
                     MPYVLGLATGELFVSANMAFNMYQGLTHGAYSAIHAHGTDEQKQTWLPRMVSCDWTGT
                     MNHPGQPG"
BASE COUNT          441 a          836 c          832 g          403 t
ORIGIN      
        1 cccgccgatg actcagcggg ccgatctcgg gcgcggccat cgctcagggc tgcggcatca
       61 ggaaatggcc ggtcgcctgt gccataaggc gggcgcggtt atcctgccag gcctcgacat
      121 ggacgctggc atagcgccgg cccgaccgta ccacacgggc gcgggcatag gcatcgcgtg
      181 gcaggcccga tcgcaggtaa tccaccgtga agccgatcgt cttgggcagg cgcggcaggc
      241 tgtcgggaac cgccgcatcc ggcgcgatgc ggccggattc cagatcctcc cacatcgcgg
      301 accatgacaa ttcgatgatc gcggtcacct ccagaaaggc ggccgtcacg ccgccatgga
      361 tcgcgggcag cgcggggttg ccgatcagct tgtcatcgaa gggcaggatc gcggtcagct
      421 cgtcgcccct gcgatcaaag cggatgccca gccatgtcat gtagggcacc cccgtcgcca
      481 gcgcccgcag cgccgaatcg cggcgcgtct tgatctggtc cagcggttcg ttgcggtcca
      541 tcatcgcgcc tgcctttccg cggtgaaggt gccggcggcg gtggcgaccg ggttgtcacc
      601 gtcctcgtcc agcgccaccg cgcgcagaaa ggcgacgctg cgggtcatgt gatagcattc
      661 cgcccgcgcg gtgatccgct gtcccggcgc cgccccgcgc atgtagtcga tgcgcagatc
      721 gatggtcgcg gtggatcgcg ggcttgaggg atgcgtcatc accgccgcgc cgcagcaggt
      781 gtccatcagc gccgagacga ccccgccatg aacgatcccg gtccgcggat cgccgaccag
      841 atgttcggac cagggcatgc tgatggtggc ccgcccctcg cccagatcgt cgacgcgcat
      901 tcccagggcc cgcgcgtggg gaatgctgtc gatgaattgc tgcgcgatcc gtgcccgatc
      961 gccgctgtcc aagccgcccg attcgtccgt catcgcgttc tcctgccacc tggccccgcg
     1021 caaggcttac ccgcgcccgc cccggctgct caacccctgc ccggccgaat gcgcgttccg
     1081 gttgagatgc gcgcgccgaa acgctagcct ttgacccagc ggcagggaga tcgggatggc
     1141 cgaggagcag acaatctctt tcaaggacat gtgcgcccgt ttcgacgtga cgccccgcac
     1201 cctgcgctat tacgaatata tcgaactgct gagcccccga aaggaaggcc gggcgcgatt
     1261 ctatggcgcg cgcgagatcg cgcggatgac gctgatcctg cgcgggcggc gtttcggatt
     1321 ctcgctggaa gacatccggc aatggctgct gatctacgaa cagaagggct cgcgccagca
     1381 atacgaggtc tggctggatc tggccgaccg gcagctgggg gtgctggacc gccagattgc
     1441 cgaccttcag gcggcgcggc aggatctggc ggaattgcgc gaaacggccg ctgccgaact
     1501 gaagaccatg aagtgacgcg gcgttccatc tttacgttcg cgtcaacttc gcgctatcgg
     1561 tggccacaga agggcagccg gtgaacgagg aggaaccgca ccccatgtcc gaaaagctga
     1621 tgacgatccg ccagatgtgc gaggcgttcg gcgtcacccc gcgcacgctg cgcttttacg
     1681 aggcgcgcga actgatcttt cccgaacgtc gcggccagca ccggctgtat gatcgcaggg
     1741 atcgcgcgcg gctgacgctg atcctgcgcg gcaagcggtt cggtttcagc ctggaacaga
     1801 tccgccagct tctggagctg taccagccgg gcggagccaa caggacgcag atcgccgcga
     1861 ccatcgggat cgcgcgcgaa cgcctgtcgg acatggaaac ccagtatgcc gaactgagcg
     1921 aggcgatcgc cgatctcagg cagcaactgg cggatgcgga agaccggctg gccgctgccc
     1981 cgcgcgacac ctcgagagga tagagccatg ccgatctaca ccccccccgt ccgcgacctg
     2041 caattcggtc tgcacgacgt gctgaaaatc cagcaatccg gcctgcccgg ccatgacgag
     2101 ctggatcgcg atttcaccga ggccgtgctg gacgcggcgg gcaagctgtc gaccgaggtt
     2161 ctggcgccgc tgaacatggt tggcgaccgg cagggctgcc ggctggaaaa cggcgtggtg
     2221 cgcaccccgg acgggttcaa ggcggctttc gagcagatga aggaaggcgg ctggaccgcg
     2281 ctggattgcg accccgaata tggcggtcag gggatgccct atgtcctggg cctggccacg
     2341 ggcgaattgt tcgtcagcgc caacatggcc ttcaacatgt atcagggcct gacccacggc
     2401 gcctattccg ccatccacgc ccatggcacc gatgaacaga agcagacctg gctgcccagg
     2461 atggtcagct gcgactggac cggcacgatg aaccatcctg ggcagccagg tc
//
LOCUS       DTVW01000499            2612 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1599762, whole
            genome shotgun sequence.
ACCESSION   DTVW01000499 DTVW01000000
VERSION     DTVW01000499.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2612)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2612)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2612
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1599762"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..524)
                     /locus_tag="EYO87_06670"
     CDS             complement(<1..524)
                     /locus_tag="EYO87_06670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017929874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIC65665.1"
                     /translation="MTPDRIAADSHALLHLQQATLRLPRHQAALLDDVSLSVSRGETL
                     CIVGESGCGKSLTSLAMMGLLSPNLRDGLSGRMVFEGDEIALTDRKALAGLRGRRIGM
                     IFQEPMSSLNPAHRIGDQIAEAWRRHNPGDGRDRALAMLRRVGIPAAERRMRDYPHQM
                     SGGMRQRVMIAMALV"
     gene            complement(705..2075)
                     /locus_tag="EYO87_06675"
     CDS             complement(705..2075)
                     /locus_tag="EYO87_06675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-binding protein"
                     /protein_id="HIC65666.1"
                     /translation="MRRLAFMMAAVLAAGAASAQEAVIRIEAKRGAAQAAQAAAKWRE
                     SFDDVVTFPLTGGWIAIALGPQERSQAEARLAGLKAANRVPGDSFVAEPAAGIALSPV
                     AADAVATPSPVPEDGGPLTGASQDAARPAATTSEGEAATPDRTPMPEAGSYLRLESLR
                     GDAESRAALSKWRETFPEAGLMALPGGWRTITLGPLPAEAAAEWLAAFKASGDVPRDA
                     FLSQASDLGEVIEPGADPDLPASAGAQEMPPVDEIQRALRWAGRYDGAVDGQWGPDTR
                     KAVAREVAEGRLSPDPGTAMRRLIERRDAWRRTMGLTTLTDEQTGLSVSAPMDKLAFE
                     RAERALSIYGPRQDSGVALILFSQPGGQQELLDLSGLVTALGWVPHPTRMIEPGHILL
                     KGANMAQSAMAEGWVRDGRAEGFVLIWPAGDQENQARVAAELSDSFARVAPAKNDGRD
                     PFAVSP"
     gene            2195..>2612
                     /locus_tag="EYO87_06680"
     CDS             2195..>2612
                     /locus_tag="EYO87_06680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005795453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit alpha"
                     /protein_id="HIC65667.1"
                     /translation="MTSPKPPRSFQEIILRLQTYWAGQGCAVLQPYDMEVGAGTFHPA
                     TTLRALGQRSWAAAYVQPSRRPTDGRYGENPNRLQHYYQYQVIIKPSPPDLQNLYLGS
                     LKAIGLDPMIHDIRFVEDDWESPTLGAWGLGWEVWCD"
BASE COUNT          424 a          965 c          810 g          413 t
ORIGIN      
        1 accagcgcca tcgcgatcat cacccgctgc cgcatcccgc ccgacatctg atgcggatag
       61 tcgcgcatcc ggcgttccgc ggccgggatg cccacacggc gcagcatggc cagcgcccga
      121 tcgcgcccgt cgccgggatt gtgccgccgc catgcttccg cgatctggtc gccgatgcga
      181 tgggcggggt tgaggctgga catcggttcc tgaaagatca tgccgatccg ccgaccccgc
      241 agcccggcca gcgccttgcg gtcggtcaag gcgatctcgt ccccctcgaa gaccatgcgt
      301 cccgacagcc cgtcgcgcag gttcggcgaa agcaacccca tcatcgccag cgaggtcagg
      361 cttttgccgc agcccgattc gccgacgatg cacagggttt caccccgcga aacggacagc
      421 gacacatcgt ccagcagcgc ggcctggtgc cgtggcaggc gcaaggtggc ctgctgaagg
      481 tgaagaagcg cgtggctgtc ggcggcaatc cggtcgggtg tcatgaaatc ctgaaccaat
      541 catgaattgg ttcacactaa cgcaaggaca cccttttgca agccccgccg ggatccggcc
      601 gcgcgccgga ccagcattgc caaaaattcg ggccttgcca ccctgcggtc atgccagcgg
      661 acagacggtt tctcccgaag gagaccgcga tcggcccggt ccgttcaggg cgataccgcg
      721 aaagggtcgc gtccgtcgtt cttagcgggg gccacccgcg cgaaactgtc ggaaagctcg
      781 gccgcgacac gggcctggtt ttcctgatcg ccggcaggcc agatcaggac gaagccctcg
      841 gcccggccgt cgcgcaccca gccttcggcc atggcgctct gggccatgtt ggcccccttc
      901 agcaggatat ggcccggctc gatcatccgt gtcggatgcg gcacccagcc aagcgccgtc
      961 accaaccccg acaggtccag caattcctgc tgtccgccgg gctggctgaa caggatcagc
     1021 gcgacaccgg aatcctgcct gggtccgtag atcgacaagg cccgttcggc ccgttcgaaa
     1081 gccagcttgt ccatcggggc gctgaccgac aggccggtct gttcatcggt cagcgtcgtc
     1141 agccccatcg tcctgcgcca cgcgtcccgg cgttcgatca gtctgcgcat cgccgttccg
     1201 ggatcgggcg acagacgccc ctcggcgacc tcgcgcgcga ctgccttgcg cgtatccggc
     1261 ccccattgcc cgtcgaccgc gccatcatag cggccggccc aacgcaaggc gcgctggatc
     1321 tcatccacgg gcggcatctc ctgcgcgccc gcggatgccg gcaggtccgg atccgcgccg
     1381 ggctcgatca cctcgcccag atccgaggcc tgcgaaagaa aggcatccct gggcacatcg
     1441 cccgaggcct tgaacgcggc cagccattcc gccgccgcct ccgcgggcag cggccccagc
     1501 gtgatcgtcc gccagccacc gggcagagcc atcagcccgg cttcgggaaa ggtttcgcgc
     1561 catttcgaca gcgccgcgcg gctttccgca tcaccacgca gggattccag ccgcagatag
     1621 ctgccggctt ccggcatcgg cgtgcgatcc ggggtggcgg cctcgccttc gcttgtggtc
     1681 gcggcgggcc ttgccgcatc ctgcgaggcc cctgttaggg gtccgccatc ttccggcacc
     1741 ggagatggtg tcgcgaccgc atcggccgca accggagaca gcgcgatgcc ggccgccggt
     1801 tcggccacga aactgtcgcc gggcacgcgg ttcgcggcct tcagcccggc cagccgcgcc
     1861 tcggcctggg atcgttcctg cggcccaagg gcgatggcga tccagccgcc cgtcaacgga
     1921 aaggtcacca cgtcgtcgaa tgactcgcgc cattttgccg cagcctgcgc tgcctgcgcc
     1981 gcgccgcgct tggcctcgat ccggatcacc gcctcctgcg ccgaggccgc cccggccgcc
     2041 agaaccgcag ccatcatgaa agccagtcgc cgcattccgg tctccttgtc gcgcgcccga
     2101 tggcgcctgt ccgcgggccc tttattgacc ctgtcctacc ctgcgcctag aaggcgcgaa
     2161 agcccaagcc cgatctatgc aaaaggacgg cccgatgacc agcccaaagc ctccgcgcag
     2221 ctttcaggaa atcatcctgc gcctgcagac ctactgggcc ggtcagggct gcgccgtgct
     2281 gcaaccctat gacatggagg tcggcgccgg caccttccat ccggccacga ccctgcgcgc
     2341 gctgggacag cggtcatggg cggcggccta tgtccagccc tcgcgccgac ccaccgacgg
     2401 ccgctacggc gaaaacccga accgccttca gcattattat cagtatcagg tcatcatcaa
     2461 gcccagcccg cccgatctgc agaacctgta tctgggcagc ctgaaagcca tcgggctgga
     2521 cccgatgatc catgacatac gctttgtcga ggacgactgg gaatccccga ccctgggcgc
     2581 ctggggcctt ggctgggaag tctggtgcga cg
//
LOCUS       DTVW01000500            1992 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1599862, whole
            genome shotgun sequence.
ACCESSION   DTVW01000500 DTVW01000000
VERSION     DTVW01000500.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1992)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1992)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1992
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1599862"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1027)
                     /locus_tag="EYO87_06685"
     CDS             complement(<1..1027)
                     /locus_tag="EYO87_06685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010399987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleoside-diphosphate reductase,
                     adenosylcobalamin-dependent"
                     /protein_id="HIC65668.1"
                     /translation="MTRFAVPIAEQIWDMKYRMKDAEGKAIDASVEDSWRRVARDLAR
                     VEKDAALWEDRFYAALEDFKFLPAGRILAGAGTGRSVTLFNCFVMGTIPDSMAGIFDM
                     LKEAALTMQQGGGIGYDFSTIRPRGAEVKGVAADASGPLSFMDVWDAMCRTIMSAGSR
                     RGAMMATMRCDHPDVEHFIEAKQDSARLRMFNLSVLVTDDFMEAVRADGPWDLTYGDR
                     VYRTVQARDLWNRIMKATYDYAEPGVIFIDRINKANNLNYVETIAATNPCGEQPLPPY
                     GACLLGSVNLARLVTDPFTDAARLDEKALDGLVRTAIRMMDNVVDASKFPLPQQRAEA
                     QAKRRIGL"
     gene            complement(1223..>1992)
                     /locus_tag="EYO87_06690"
     CDS             complement(1223..>1992)
                     /locus_tag="EYO87_06690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010394541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /protein_id="HIC65669.1"
                     /translation="AVPALLVLLLGVVLILPLRAAERLIHGSRRPWTGPHVQLVCRLV
                     LACIGLDWQRKGRPMRGPGAVVANHSSWLDILTMNAAMPVFFVSKAEVRRWPGINILT
                     AVTNTHFVVRDPKFARAQATEFAVRIRAGHRLLFFPEGTSTDGRRVLAFKPTLFQGFL
                     DPGLPADLAIQPMSVIYHAPEGADPRFYGWWADMALADHLLAVLSARRQGMAEVVLHQ
                     PVPVAGETRKSLAAKTEAAVRGGVEQGLVQNPPRRQG"
BASE COUNT          357 a          695 c          618 g          322 t
ORIGIN      
        1 ccagtccgat ccggcgcttg gcctgcgcct cggcccgctg ctgcggcagc gggaatttcg
       61 aggcatcgac gacattgtcc atcatccgga tggcggtccg gaccaagccg tccagcgcct
      121 tttcgtccag cctggcggca tcggtgaacg gatccgtcac cagccgcgcc aggttgaccg
      181 aacccagcag gcaggcgcca tagggcggca ggggctgttc gccgcaggga ttggtcgcgg
      241 cgatcgtctc gacatagttc aggttgttgg ccttgttgat ccggtcgatg aagatcacgc
      301 cgggttcggc gtaatcatag gtggccttca tgatccggtt ccaaagatcg cgcgcctgaa
      361 ccgtgcgata gaccctgtcg ccataggtca ggtcccatgg cccgtcggcc ctgaccgcct
      421 ccatgaaatc gtcggtgaca aggacggaca gattgaacat gcgcaaccgg gcgctgtcct
      481 gcttggcctc gatgaagtgt tccacgtccg ggtggtcgca gcgcatcgtc gccatcatcg
      541 ccccccggcg cgacccggcc gacatgatcg tgcgacacat cgcgtcccag acatccatga
      601 aggacagcgg gccggacgcg tcggccgcca cgcccttcac ctcggctccg cgcgggcgga
      661 tggtgctgaa atcgtaaccg atcccgccac cctgctgcat ggtcagcgcg gcctccttca
      721 gcatgtcgaa gatgccggcc atgctgtcgg gaatcgtgcc catgacgaag cagttgaaca
      781 gcgtcaccga gcggccggtg cccgcgcccg ccagaatccg tccggcgggc aggaacttga
      841 aatcctccag cgcggcgtag aaccgatcct cccacagcgc ggcgtccttc tcgacccgcg
      901 ccagatcgcg cgccacgcgc cgccagctat cctcgaccga tgcgtcgatc gccttcccct
      961 cggcgtcctt catccggtat ttcatatccc agatctgttc ggcgatgggg acggcaaagc
     1021 gggtcatagc ggcattcctt tggcagtcac gacgggcgag accactatat atagtcatcg
     1081 gagagacttc ggataacccg ccgatcatgc gcgttcaagc ctcaataggg aagcccccga
     1141 agatcggcat ttccgcgcaa tcaaggccga tgcaacaccc gccgggacac cgcccaaccg
     1201 cgtcgccgct tgcgcccctc tctcagccct ggcgcctggg cgggttttgg acaagtccct
     1261 gttcgacccc gccccgcacc gcggcctcgg tcttcgcggc cagagatttg cgcgtctcgc
     1321 ccgcgaccgg caccggctga tgcagcacca cctctgccat tccctgacgg cgcgcggaca
     1381 gcactgccag caggtgatcg gccagcgcca tgtcggccca ccagccgtaa aaccgcggat
     1441 cagcgccttc gggtgcgtgg tagatcacgc tcatcggctg gatggccaga tccgcgggca
     1501 ggccgggatc cagaaagccc tgaaacagcg tcggcttgaa ggccagaacg cggcggccat
     1561 cggtcgaggt gccctcggga aagaacagca gccggtggcc ggcgcggatg cggacggcga
     1621 attcggtcgc ctgcgcacgg gcaaatttcg ggtcacggac cacgaaatgc gtgttcgtga
     1681 ccgccgtcag gatattgatc cccggccagc ggcgaacctc ggccttgctg acgaaaaaga
     1741 ccggcatggc ggcgttcatg gtcaggatat cgagccagct cgaatgattc gccaccaccg
     1801 cgccggggcc gcgcatgggt cgccccttgc gctgccagtc caggccgata caggccagga
     1861 ccagccggca gaccagttgc acatgcggcc ccgtccaggg ccggcgcgag ccgtggatca
     1921 gcctctcggc cgcgcgcagc ggcaggatca gcaccacgcc cagcaacagc accagcaatg
     1981 ccggcacagc cc
//
LOCUS       DTVW01000501            1991 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_160301, whole
            genome shotgun sequence.
ACCESSION   DTVW01000501 DTVW01000000
VERSION     DTVW01000501.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1991)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1991)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1991
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_160301"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..607
                     /locus_tag="EYO87_06695"
     CDS             <1..607
                     /locus_tag="EYO87_06695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_353046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HIC65670.1"
                     /translation="ALTYLDEVHAVGMYGPRGGGVAERDGLAGRIDIINGTLGKAFGV
                     FGGYIAASATMCDAIRSYAPGFIFTTSLPPAVAAGAAASIRLLKTAEGQTLRDAQQLH
                     AKILKMRLQSLGMPIIDHGSHIVPVHVGHPVHCKQLSDMLLRDYGIYVQPINFPTVPR
                     GTERLRFTPSPVHDPGRIDQLVRAMDALWSHCALNRAEMSA"
     gene            814..>1991
                     /locus_tag="EYO87_06700"
     CDS             814..>1991
                     /locus_tag="EYO87_06700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HIC65671.1"
                     /translation="MRGERATLGKSLLDVQRELRIRASYVAAIENCDITAFDTPSFIS
                     GYVRSYSRYLGMDPDWTFRRFCLESGFQPTHGMAPSASGPKPGRRPSEPAEALANPHA
                     LFLPQRESFWTQIEPRAMGSVLVLIAIMGGLAYGGWAVLQEVQRVTLTPGETTPGVVT
                     ELDPAAGAGMSVPLLESGDTAEIAQNLPQPEGLDRIYRPQILEAPVLTSRDGPIAAID
                     PGLARQTATAQGGDMTAGSAEGADAIQRALASAGAGEAVEYGPQMPESQHSVTMAADA
                     PELQLLAARPAWVRVTTSDGTVLLEKIMDAGERFSLPKLEEPPVLRTGNSGAIYFAVN
                     GKTYGPAAPGPQVVKNIRLSPDALTGTFALADLNADPELAQMVALAQAAPVNGEAQAT
                     "
BASE COUNT          348 a          614 c          689 g          340 t
ORIGIN      
        1 cgcgctgacc tatctggacg aggttcacgc ggtcggcatg tacgggccgc gcggcggcgg
       61 tgtggcggaa cgcgacgggc tggcggggcg tatcgacatc atcaacggca cgctgggcaa
      121 ggcctttggc gtgttcggcg gctatatcgc ggccagcgcc accatgtgcg acgcgatccg
      181 atcctacgcg ccgggcttca tcttcaccac ctcgctgccg cccgcggtgg ccgccggggc
      241 agccgcctcg atccggctgc tgaagacggc cgaagggcag acgctgcgcg atgcccagca
      301 attgcacgcg aagatcctga aaatgcggct gcaatcgctg gggatgccca tcatcgatca
      361 tggcagccat atcgtgccgg tccatgtcgg gcacccggtc cactgcaagc aattgtccga
      421 tatgttgctg cgcgattacg gcatctacgt gcaaccgatc aactttccca cggtgccgcg
      481 cggcaccgag cgcctgcggt tcacgccctc gccagtgcac gatcctggac gaattgatca
      541 gctggtgcgg gcgatggatg cactttggtc gcattgtgcg ttgaatcgcg ccgaaatgag
      601 cgcgtgacac aatcgacggg tgaactgctc tcgcgtccgt gataaccttg gtttaaacaa
      661 ggcaggatat cgttccgatt cgggcgatac ggtcagcggg caaagaggca ggcaggaatg
      721 agcaggctgc gggctgaaat cccggcagag gagttgatgc aggtggagga agtggaccat
      781 ttcctcgatg acgacacacg tctcggcgac atcatgcgcg gcgagcgggc gacgctgggc
      841 aaatcgctgc tggatgtgca gcgcgaattg cggatccggg cctcctatgt cgccgcgatc
      901 gagaattgcg acatcacggc tttcgatacg cccagcttca tctcgggcta tgtgcgatcc
      961 tattcgcggt atctgggcat ggacccggac tggaccttcc gccgcttctg tcttgaatcg
     1021 ggcttccagc cgacgcatgg catggcgccc tcggcctcgg ggccgaaacc cgggcgcagg
     1081 ccgtcggaac cggccgaggc gctggccaat cctcatgcct tgttccttcc tcagcgcgaa
     1141 agcttctgga cgcagatcga accccgggcg atgggctcgg tcctggtgct gatcgcgatc
     1201 atgggcgggc tggcctatgg cggctgggcc gtgctgcaag aggtgcagcg ggtgacgctg
     1261 acgccgggcg aaaccacccc aggcgtggtg acggaactgg atccggctgc cggcgccgga
     1321 atgtcggtgc cgttgctcga aagtggcgat accgctgaaa tcgcgcagaa tctgccgcag
     1381 cccgagggac ttgaccggat ctaccggccg cagattctgg aggcgccggt gctgacttct
     1441 cgcgacggcc cgatcgcggc catcgatccg gggcttgcac ggcaaacggc gacggcgcaa
     1501 ggcggcgaca tgacggccgg ttccgccgaa ggggcggacg cgatccagcg tgcgctggcc
     1561 tcggccgggg cgggcgaggc ggtggaatac ggaccgcaga tgccggaaag ccagcactcg
     1621 gtcacgatgg cggcggatgc gcccgagctt cagttgctgg ccgcccggcc tgcctgggtg
     1681 cgggtcacca cctcggacgg gacggtgctg ctggaaaaga tcatggatgc cggcgaacgc
     1741 ttcagcctgc ccaagctgga agaaccgccg gtgctgcgca cgggcaattc gggcgccatc
     1801 tatttcgcgg tgaacggcaa gacctacggt cccgcggcgc cggggcctca ggtggtcaag
     1861 aatatccgtt tgtcacctga tgcgctgacc ggaacatttg cgctggccga tctgaacgcc
     1921 gatcccgaac tggcgcagat ggtggcgctg gcccaggccg cgccggtaaa tggcgaggcg
     1981 caggcgaccg a
//
LOCUS       DTVW01000502            1309 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1603263, whole
            genome shotgun sequence.
ACCESSION   DTVW01000502 DTVW01000000
VERSION     DTVW01000502.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1309)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1309)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1309
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1603263"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..284
                     /locus_tag="EYO87_06705"
     CDS             <1..284
                     /locus_tag="EYO87_06705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010396266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glutathione S-transferase"
                     /protein_id="HIC65672.1"
                     /translation="LMKLDTRRLAVTARALEGHLSRQDMLLAGGFSAADCMMGFNIEA
                     VFRFLPKAEFPALAAYRDRMTARPAYRRALDRAGGDSIYQREFYELPDA"
     gene            277..1140
                     /locus_tag="EYO87_06710"
     CDS             277..1140
                     /locus_tag="EYO87_06710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009814862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylglutaryl-CoA lyase"
                     /protein_id="HIC65673.1"
                     /translation="MPDHAEIFEMGPRDGLQNEKRLIPAARKIALVDLLSLAGFRRIE
                     VTSFVSPKWVPQLGDAAQVMAGIARRPGVRYAALTPNMKGYEAAREAGASEVAIFASA
                     SEGFSRANLNAGIAESLDRFAPVARAARDDGIPVRGYVSVVTDCPFDGPTPPGNAARV
                     AAALREMGCYEISLGDTIGQGRPETIDAMLSAVLDEVPANRLAGHYHDTAGRALMNID
                     ASLARGLRVFDAAVGGLGGCPYAPGAKGNVATEKVARHLEALGHATGLDMAVIDRAAA
                     MARDMRKEADV"
     gene            1133..>1309
                     /locus_tag="EYO87_06715"
     CDS             1133..>1309
                     /locus_tag="EYO87_06715"
                     /EC_number="4.2.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011840852.1"
                     /note="Catalyzes the reversible hydration of unsaturated
                     fatty acyl-CoA to beta-hydroxyacyl-CoA; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase"
                     /protein_id="HIC65674.1"
                     /translation="MSETIRIETDSRGVATLSLARPNKHNALSQAMMEDLTRAAAGLG
                     ADPAVRVVVLAGDGA"
BASE COUNT          211 a          406 c          493 g          199 t
ORIGIN      
        1 cgctgatgaa gctggacacc aggcggctgg cggtgacggc gcgggcgctg gaagggcatc
       61 tgtcgcgtca ggacatgctg ctggcaggtg gcttttcggc ggctgactgc atgatgggtt
      121 tcaatatcga agccgtgttc cggtttctgc caaaggccga attcccggca ctggcggcct
      181 atcgcgaccg gatgacggcg cggcccgcct atcgccgtgc gttggacagg gcgggcggcg
      241 acagcatcta tcaacgcgaa ttctacgagc tgcccgatgc ctgatcacgc cgagatcttc
      301 gagatgggac cgcgagacgg gttgcagaac gaaaagcggc tgatcccggc ggcgcggaag
      361 atcgcgctgg tcgatctgct gtcgctggcg ggattccggc gcatcgaggt gaccagcttc
      421 gtcagcccga aatgggtgcc gcagctgggc gacgcggcgc aggtgatggc aggcatcgcg
      481 cggcggccgg gggtccgcta tgccgcgctg accccgaaca tgaagggcta tgaggccgcg
      541 cgcgaggcag gcgccagcga ggtcgcgatc ttcgccagcg cctcggaggg gttcagccgc
      601 gccaatctga acgccggcat cgccgaaagc ctggaccgtt tcgcgccggt cgcgcgggcc
      661 gcgcgcgatg acgggatccc ggtccgcggc tatgtcagcg tcgtgaccga ttgtcccttc
      721 gacggcccga cgccgccggg caatgcggca cgggtcgcgg cggcgctgcg cgagatgggc
      781 tgctacgaga tcagccttgg cgacacgatc ggccagggac gccccgagac catcgacgcg
      841 atgctgtcgg cggtgctgga cgaggttccg gcaaaccggc tggccggaca ttatcacgat
      901 actgccggtc gggcgctgat gaatatcgac gccagcctcg cgcgcgggct gcgggtcttc
      961 gacgcggcgg tgggcggcct tggcggctgc ccctatgcgc ccggcgccaa gggcaatgtc
     1021 gcgaccgaaa aggtggcgcg gcatcttgag gccctgggcc atgcgaccgg gctcgacatg
     1081 gcggtcatcg acagggccgc ggcgatggcg cgcgacatgc gaaaggaagc cgatgtctga
     1141 aacgatccgg atcgaaaccg attcgcgcgg tgtggcgacg ctgtcgctgg cgcgaccgaa
     1201 caagcataac gccctgtcac aggcgatgat ggaggatctg acccgcgccg cggccgggct
     1261 gggcgccgat ccggcagtgc gcgtggtggt gctggccgga gacggggcc
//
LOCUS       DTVW01000503            1200 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_160387, whole
            genome shotgun sequence.
ACCESSION   DTVW01000503 DTVW01000000
VERSION     DTVW01000503.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1200)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1200)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1200
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_160387"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..244)
                     /locus_tag="EYO87_06720"
     CDS             complement(<1..244)
                     /locus_tag="EYO87_06720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007685054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HIC65675.1"
                     /translation="MKKDAIFEFFRRLAELNPSPETELEFDNTYQLLVAVVLSAQATD
                     VGVNKATRALFREVTTPQQMVELGEEGLKQHIKTIGL"
     gene            complement(241..969)
                     /locus_tag="EYO87_06725"
     CDS             complement(241..969)
                     /locus_tag="EYO87_06725"
                     /EC_number="1.17.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007012253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate reductase"
                     /protein_id="HIC65676.1"
                     /translation="MTKIGIIGSQGRMGQAIAAAAEAAGVEVAGGVDKDGDVAALAAK
                     ADVLIDFSSPGALEGNLDAAMAAGVPVVIGTTGLEERHHWLIDSAAQAIPVLQTGNTS
                     LGVTLLAHLVREAANRLGEDWDIEIVETHHRMKVDAPSGTALLLGEAAAEGRGIALAD
                     NSERGRDGITGKRESGTIGFAALRGGTVAGDHAVMFLSDSERLTLSHMAENRTIFAKG
                     ALRAAEWVQGKPAGRYTMPEVLGL"
     gene            1075..>1200
                     /locus_tag="EYO87_06730"
     CDS             1075..>1200
                     /locus_tag="EYO87_06730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007012252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent protein deacylase"
                     /protein_id="HIC65677.1"
                     /translation="MSTIRNIVILTGAGVSAESGIDTFRDGGGLWEQHRVEDVATP"
BASE COUNT          168 a          412 c          406 g          214 t
ORIGIN      
        1 acaggccgat ggtcttgatg tgctgcttga gcccttcctc gcccagctcg accatctgct
       61 gcggcgtcgt cacttcgcga aacagcgccc gcgtcgcctt gttgacgccg acgtcggtcg
      121 cctgcgcgga cagcaccacg gcgacgagca gctggtaggt attgtcgaat tccagctcgg
      181 tctcgggcga ggggttcagc tcggccagac ggcggaagaa ttcgaagatg gcgtcttttt
      241 tcaaaggccc agcacttccg gcatcgtgta gcgcccggca ggcttgccct gcacccattc
      301 ggctgccctg agcgcgccct tggcgaagat cgtgcggttc tcggccatgt gcgagagggt
      361 gaggcgctcg ctgtcgctga ggaacatgac cgcatgatcg ccggcgacgg tgccgccgcg
      421 tagcgcggca aagccgatgg tgccgctttc gcgcttgccg gtgatgccgt cgcggccgcg
      481 ttccgagttg tcggcgaggg caatgccgcg cccctcggcg gccgcttcgc cgagcagcag
      541 cgctgtgccc gaaggggcat cgactttcat gcggtggtgg gtctcgacga tctcgatatc
      601 ccagtcctcg ccgagccggt tcgcggcctc gcgcacgagg tgggcgagca gagtgacgcc
      661 gagcgaggta ttgccggtct gaagcacggg gatggcctgc gcggcgctgt cgatcagcca
      721 gtggtggcgt tcctccagcc cggttgtgcc gatcaccacc ggcacgccgg ctgccatcgc
      781 cgcatcgaga ttgccttcga gcgcgccggg gctggagaag tcgatcagca cgtcggcttt
      841 ggcggccagc gcggccacgt cgccgtcctt gtcgacgccg ccggccactt cgacgcccgc
      901 tgcctcggcg gcggctgcga tggcctggcc catccggccc tggctgccga taattccgat
      961 cttcgtcact gcgcactctc cgctagccct gcgcgcgccg ccgggcggtt ccgcgccccg
     1021 catggcgcaa acaggccctt tcgacaaggt tgcggtgcag gctatgatgg cgccatgtcc
     1081 accattcgca acatcgtcat cctcaccggc gccggcgtca gcgccgaaag cggcatcgat
     1141 acctttcgcg acggcggcgg cctgtgggag caacaccgcg tcgaggacgt ggcgacgccc
//
LOCUS       DTVW01000504            1786 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1606935, whole
            genome shotgun sequence.
ACCESSION   DTVW01000504 DTVW01000000
VERSION     DTVW01000504.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1786)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1786)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1786
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1606935"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..646)
                     /locus_tag="EYO87_06735"
     CDS             complement(<1..646)
                     /locus_tag="EYO87_06735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011242051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-(hydroxymethyl)glutathione dehydrogenase"
                     /protein_id="HIC65678.1"
                     /translation="MKTRAAVALEAGKKLEVMEVNLDGPKEGEVMVEIKATGICHTDE
                     FTRSGADPEGLFPAILGHEGAGVVVEVGPGVKSVKPGDHVIPLYTPECRECASCLSGK
                     TNLCTRIRATQGQGLMPDGTSRFSMPDGTPIHHYMGCSTFSNFTVLPEIAVAKVRDDA
                     PFDKICYIGCGVTTGIGAVINTAKVEIGAKAVVFGLGGIGLNVIQGLRLAGADMI"
     gene            complement(747..1331)
                     /gene="gfa"
                     /locus_tag="EYO87_06740"
     CDS             complement(747..1331)
                     /gene="gfa"
                     /locus_tag="EYO87_06740"
                     /EC_number="4.4.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002719724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-(hydroxymethyl)glutathione synthase"
                     /protein_id="HIC65679.1"
                     /translation="MAHTDGIRIHPDVDHGVKQGSSGFSGGTLTCHCASNPVKVRVGG
                     QTAHNHVCGCTRCWKPDGATFSQVAVVSRDAVEVLENGDKLEVVDESAAIQRHRCREC
                     GVHMYGRIENKDHPFYGLDFIHTELSDEDGWSAPEFAAFVSSVIESGVDPSRMDAIRA
                     RLRELGLEPYDALSPPLMDAIATHVAKRSGALPA"
     gene            complement(1455..>1786)
                     /locus_tag="EYO87_06745"
     CDS             complement(1455..>1786)
                     /locus_tag="EYO87_06745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010392108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HIC65680.1"
                     /translation="ARDLLPVHDALTRALDAAGEEQRSNAAALIEGVELTLRELENVF
                     SKHGITLIRPAQGEKFDPTWHEAMFEAAVPGTRAGEIIQVMDNGFRLHDRLLRPAKVG
                     VSSTPAS"
BASE COUNT          294 a          580 c          577 g          335 t
ORIGIN      
        1 tgatcatgtc ggcgccggcc aggcgcaggc cctggatcac gttcaggccg atcccgccca
       61 gtccgaagac caccgccttg gcgccgattt ccaccttggc ggtgttgatg accgcgccga
      121 tgccggtggt cacgccgcag ccgatatagc agatcttgtc gaagggcgcg tcgtcgcgga
      181 ccttggccac ggcgatttcc ggcaggacgg taaagttcga gaaggtcgaa cagcccatgt
      241 agtgatggat cggcgtgccg tccggcatcg agaaccggct ggttccgtcg ggcatcagcc
      301 cctgcccctg cgtggcgcgg atcctggtgc acaggttggt cttgcccgac aggcaggacg
      361 cgcattcgcg gcattcgggg gtgtaaagcg ggatcacgtg atcgccgggc ttcacggact
      421 tgacgccggg accgacctcg accaccacgc ccgcgccctc gtgtcccagg atcgcgggaa
      481 acagcccctc ggggtcggcg cccgaacggg tgaattcgtc ggtgtggcat attccggtcg
      541 ccttgatctc gaccatcacc tcgccttcct tcggcccgtc gagattgacc tccatcactt
      601 ccagcttctt gccggcctcc agggctacgg cggcacgggt tttcatgctt gatctcctgt
      661 tcttcgatcg ggcttgtcgg tcatggccga gggggccggt tgtcgcggcc ccctgacgga
      721 atgtgtgaaa tcgggccgtg acgccgtcaa gcgggcaacg cgcccgaccg tttcgcgaca
      781 tgcgtggcga tggcgtccat cagcggcggc gacagcgcgt catagggttc cagccccaat
      841 tcgcgcagcc gtgcgcgtat cgcgtccatg cgcgagggat cgacacccga ttcgatcacg
      901 gaactgacga aggccgcgaa ttcaggcgct gaccagccat cttcgtcgga caattcggta
      961 tggatgaaat caagtccgta gaacggatgg tccttgttct cgatccggcc atacatgtga
     1021 acgccgcatt cgcggcagcg atggcgctgg atcgcggcgg attcgtccac cacttccagc
     1081 ttgtcgccgt tttccagtac ctcgaccgcg tcacgcgaca cgaccgcgac ctgactgaag
     1141 gtcgcgccat cgggcttcca gcacctggtg cagccgcaga catggttgtg ggcggtctgg
     1201 cccccgaccc ggaccttgac cgggttgctg gcgcaatggc aggtcagcgt tccgccggaa
     1261 aagccggaac tgccctgttt cacgccgtga tcgacgtccg ggtgaatcct gatcccgtcg
     1321 gtatgtgcca tggtcccctc ctccgatgac cgaatgttcc accagcgtcg cgcggtcggg
     1381 aacattcggc aagtcagcgg aaggttgtag cgccagagat cggaagcaac aggatcggct
     1441 tgccgaaacg cggatcagct ggccggcgtc gaactgaccc cgaccttggc cggacgcagc
     1501 aggcggtcgt gcaggcggaa tccgttgtcc atcacctgaa tgatctcgcc cgcgcgggtg
     1561 ccgggcacgg cagcctcgaa catggcctcg tgccacgtcg gatcgaattt ctcgccctgg
     1621 gcgggccgga tcagggtgat gccatgtttg gaaaagacgt tttccagctc gcgcagggtc
     1681 agttcgaccc cctcgatcag ggcggcggca ttggatcgct gctcctcgcc ggccgcatcc
     1741 agtgcgcggg tcagcgcgtc atggaccggc agcaggtcgc gcgcca
//
LOCUS       DTVW01000505            2657 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1607701, whole
            genome shotgun sequence.
ACCESSION   DTVW01000505 DTVW01000000
VERSION     DTVW01000505.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2657)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2657)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2657
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1607701"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            90..1838
                     /locus_tag="EYO87_06750"
     CDS             90..1838
                     /locus_tag="EYO87_06750"
                     /inference="COORDINATES: protein motif:HMM:PF05686.10"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65681.1"
                     /translation="MSHAVAKAALSGRPDRAIDSIARPPDKIGHPPPASRPVLSRKFF
                     QIGFNKCGTTFIARLFAMNGIPTVHWEENGLAEDIAFSKLSGRAPLQPWAHVTAFTDM
                     ESVRSINLPIVEAFREFAYLDRSFPGSVFLLNTRRVEDWIISRYRHRGGRYARACAQA
                     RGVGLPDLADLWQADWDAHLAAVRSHFAGRPKLIQIDIDKAGPADYRDALAPYFDLPT
                     CPDLPGPGLRRKRAGYLPALDRMLNPPRAAIPAADHDRIAGGLAAFARPARIRMKPVG
                     FAACSGQFATFDAATGKVAARGGVPLPILPDAGRRFHLDPAFPRWMNVAAAVNDIAEV
                     ASRGLYYIDMQPACRAGAGDGARIGRPILAPSRRAGAENVFLWPAPRAHWPGNDAFLG
                     NPDRADPPFPDKRDRAIWRGALSDDAAEDGAPPGADRLGFVAAHAGSTDVDAAFLPGD
                     RAALDRRGHGGLATGRADEAFLLSHRYLICLGGVAGLRDFAALANTRSVVLKEEDDWQ
                     GFHSGLFQPWRHYVPLAQGCGDLAERLAWARANPAECGRISERARAICAALADPDLRR
                     RHLTRVLQDYRAATGQ"
     gene            complement(1842..2555)
                     /locus_tag="EYO87_06755"
     CDS             complement(1842..2555)
                     /locus_tag="EYO87_06755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005858144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TOBE domain-containing protein"
                     /protein_id="HIC65682.1"
                     /translation="MPAAADKGDLEVVLPDVVVLVAVSSCALQFPFSLQCCFPSTADS
                     GLDERLRDGIRDETLSLLKEEGAAVLLVTHEPEEAMRMADQILLMRHGRIMQHGAPYN
                     LYNAPVDRQAAAFFSDINVLTGRVQGALTDTPFGQFLTPGVPDGSEVDIVIRPQHLKI
                     DFDRAGQGPAPTIENGTAARARVTRARYLGRESLVEFRTDQGGIALIATVPGVFLPPE
                     GTPMWLMLRRDRVFVFPRS"
     gene            2490..2657
                     /locus_tag="EYO87_06760"
                     /pseudo
     CDS             2490..2657
                     /locus_tag="EYO87_06760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_228283.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal 5'-phosphate synthase lyase subunit
                     PdxS"
BASE COUNT          396 a          926 c          918 g          417 t
ORIGIN      
        1 cggctgctcc ttcggcaccg gcgccgggcc ggattctccc gaaatcctgt cccgacagct
       61 atccgcgccc cgcgcccgag gcaagcccct tgtcgcatgc ggtcgcgaaa gcggcgcttt
      121 cgggccggcc ggaccgggcg attgacagca tcgcccgacc gcccgacaag atcggtcatc
      181 cgccgccagc ctcgaggccc gtcctgtcgc gcaagttctt ccagatcggt ttcaacaaat
      241 gcggcacgac cttcatcgcg cgtctcttcg cgatgaacgg cattccgacc gtgcattggg
      301 aggaaaacgg actggccgag gatatcgcct tctcgaagct gtcgggccgg gcaccgctgc
      361 aaccctgggc gcatgtgacg gccttcaccg acatggaatc ggtgcgctcg atcaacctgc
      421 ccatcgtcga ggcgttccgc gaattcgcct atctggaccg cagcttcccg ggttcggtct
      481 tcctgctgaa cacgcgccgg gtcgaggact ggatcatcag ccgctaccgg catcgcggcg
      541 gccgctatgc gcgcgcctgc gcccaggccc gcggcgtcgg cctgcccgac ctggccgatc
      601 tgtggcaggc cgactgggac gcgcatctgg ccgccgtccg cagccatttc gcgggccgcc
      661 cgaagctgat ccagatcgac atcgacaagg ccggtcccgc cgattaccgc gatgcgctgg
      721 cgccgtattt cgacctgccg acctgtccgg acctgccggg gccgggcctg cggcgcaagc
      781 gggccggcta tctgccggcg ctggaccgga tgctgaaccc cccgcgcgcc gccatccccg
      841 ccgccgatca cgaccgcatc gcaggcgggc ttgcagcctt tgcccggccg gcgcggatac
      901 ggatgaaacc ggtgggtttc gccgcctgtt ccggccagtt cgccaccttc gacgcggcga
      961 ccggcaaggt cgccgcgcgc ggtggcgtgc cgctgccgat cctgcccgat gccgggcggc
     1021 gctttcacct ggacccggcc tttccgcgct ggatgaacgt cgcggcggcg gtgaacgaca
     1081 tcgccgaggt cgcgtcgcgg gggctttact acatcgacat gcagccagcc tgccgcgccg
     1141 gtgccggaga cggtgcgcgg atcggccgcc cgatcctggc ccccagtcgc cgcgccgggg
     1201 ccgagaacgt gttcctgtgg cccgcgccgc gcgcgcattg gccgggcaac gatgcctttc
     1261 tgggcaatcc cgaccgcgcc gacccgccct ttccggacaa gcgggaccgc gccatctggc
     1321 gcggggcgct gtcggacgat gccgcagagg acggtgcccc gcccggggca gaccgtctgg
     1381 gctttgtcgc cgcccatgcc ggatcgaccg atgtcgatgc cgccttcctg cccggggacc
     1441 gcgccgcgct ggaccggcgc gggcatggcg gcctggccac cgggcgcgcg gacgaggcgt
     1501 ttctgctgtc gcaccgctat ctgatctgcc tgggcggtgt ggcgggactt cgggatttcg
     1561 cggccctggc caatacccgg tccgtggtgc tgaaagagga agacgactgg caaggctttc
     1621 attccggcct gttccagccc tggcggcact atgtcccgct ggcgcaaggc tgcggcgatc
     1681 tggcggaaag actggcctgg gcacgggcca acccggcgga atgtgggcgc atctcggaac
     1741 gggcgcgggc aatctgcgcg gcgctggccg atccggacct gcgccgccgg cacctgacgc
     1801 gggtcttgca ggattaccgc gccgcgaccg ggcagtgatc gtcagcttct gggaaagacg
     1861 aagacccggt cgcggcgcag catcagccac atgggcgtgc cttcgggcgg caggaacacc
     1921 cccggcacgg tcgcgatcag cgcgatgccg ccctggtcgg tccggaattc gaccagcgat
     1981 tcccggccca gataacgggc gcgggtcaca cgggcgcggg cggcggtgcc gttctcgatc
     2041 gtgggcgcgg ggccctggcc ggcccggtcg aaatcgatct tcagatgctg cgggcggatc
     2101 acgatgtcca cctcgctgcc gtcgggaacg cccggcgtca ggaattgccc gaagggcgtg
     2161 tcggtcagcg cgccctggac acggccggtc aggacattga tatcgctgaa gaatgcggca
     2221 gcctggcggt caaccggcgc attgtagaga ttatagggcg cgccgtgctg catgatccgg
     2281 ccgtggcgca tcagcaggat ctggtccgcc atccgcatcg cctcttccgg ttcgtgcgtg
     2341 accagcagga cggcggcgcc ttcctctttc agcagcgaca gggtctcgtc gcggatgccg
     2401 tcgcgcaaac gctcgtcaag gccgctatcc gctgtggatg gaaagcagca ctgaaggcta
     2461 aacgggaact gaagagcgca agagctcaca gcaacgagga caaccacgtc tggaagcacg
     2521 acttcaaggt cccctttatc tgcggctgcc gggatctggg ggaggccata cgccgccttg
     2581 ccgagggcgc agccatgatc cggacgaagg gggaagcggg caccggggac gtggtggagg
     2641 cagtgcgcca catgcga
//
LOCUS       DTVW01000506            1283 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1607712, whole
            genome shotgun sequence.
ACCESSION   DTVW01000506 DTVW01000000
VERSION     DTVW01000506.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1283)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1283)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1283
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1607712"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            10..750
                     /locus_tag="EYO87_06765"
     CDS             10..750
                     /locus_tag="EYO87_06765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019954489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1013 domain-containing protein"
                     /protein_id="HIC65683.1"
                     /translation="MAKATAVWLVDNTTLSFKQIGDFCGLHELEVQGIADGDVAAGVK
                     GYDPVASHQLEPAEIKKGEADPAYSLKLKYNPAAEGEEKRRGPRYTPLSKRQDRPAAI
                     LWLVKFHPELADSQVAKLVGTTKPTINSIRDRTHWNISNIQPIDPVALGLCRQTELDA
                     AVQKAAKKRTADGEVMTDDERRKLVSTETSLAMSGEEPRLPTAIAGLENFSLSRDEDE
                     EEKPQREVDADSFFNLPDSGDDEDEDDR"
     gene            complement(826..1080)
                     /locus_tag="EYO87_06770"
     CDS             complement(826..1080)
                     /locus_tag="EYO87_06770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007118274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GlsB/YeaQ/YmgE family stress response membrane
                     protein"
                     /protein_id="HIC65684.1"
                     /translation="MEGFGWILSIILGAIAGWIAEKIMKSDHSLVVNIILGILGALVG
                     NWLFRALLGGTAGGVIGQLVVAVIGACILIWLGRLVRSKT"
     gene            complement(1185..>1283)
                     /locus_tag="EYO87_06775"
     CDS             complement(1185..>1283)
                     /locus_tag="EYO87_06775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007795275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HIC65685.1"
                     /translation="PFGGVKQSGLGREGSHHGIDDYLEMKYICLSI"
BASE COUNT          269 a          420 c          396 g          198 t
ORIGIN      
        1 aagccgctga tggccaaggc taccgccgtc tggctggttg acaacaccac gctgagtttc
       61 aagcagatcg gcgatttctg cggtctgcac gagttggaag tgcagggcat cgccgatggc
      121 gacgtggctg ccggcgtgaa gggctatgat ccggtggcct cgcaccagct tgagccggcc
      181 gagatcaaga agggcgaggc cgatcccgcc tattcgctga aactgaaata caatcctgcc
      241 gccgagggcg aggaaaagcg tcgcgggccg cgctacacgc cgctgtccaa gcgtcaggac
      301 cgccccgccg cgatcctgtg gctggtgaaa tttcatcccg aactggccga ttcccaggtc
      361 gccaagctgg tcggcacgac caagcccacg atcaactcga tccgcgaccg gacgcattgg
      421 aacatctcca acatccagcc gatcgacccg gtcgcgctgg gcctgtgccg ccagaccgaa
      481 ctggatgccg ctgtccagaa ggcggccaag aaacgcaccg ccgacggcga ggtgatgacc
      541 gatgacgaac ggcgcaagct ggtcagcacc gaaacctcgc tggcgatgag cggggaggaa
      601 ccgcgcctgc ccaccgccat cgccgggctg gagaatttct cgctgtccag ggacgaggac
      661 gaagaggaaa agccgcagcg cgaggtggat gcggacagtt tcttcaacct gcccgacagc
      721 ggcgacgatg aggatgagga cgaccgctag gccgaccgtc tgcacaaggg aaagccggcg
      781 cggagaaacc cgcgccggcg ttttcatggt ccgtgaccgt ggccgtcagg tcttgctgcg
      841 gaccagcctg cccagccata tcaggatgca ggcaccgatg accgcgacca caagctgtcc
      901 gatgacgccg ccggctgtgc cgcccagcag cgcgcggaac agccagttcc cgaccagcgc
      961 gcccagaatg cccaggatga tgttcacgac caggctgtga tcgcttttca tgatcttttc
     1021 cgcgatccag cctgcaatcg cgccgagaat gatggacaga atccagccga aaccttccat
     1081 gacgagcctt ccctgattga tgccaaggca ccgcttccgc ggcgccgttc gccgacaaaa
     1141 tgcgcggcgg aagccaatcg ttccgccacg ccgcaaatcc gccgtcagat cgacaggcag
     1201 atatatttca tctccagata atcatcgatg ccgtggtggc tgccctcgcg gcccaggccc
     1261 gactgcttga cgccgccgaa ggg
//
LOCUS       DTVW01000507            1186 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_160996, whole
            genome shotgun sequence.
ACCESSION   DTVW01000507 DTVW01000000
VERSION     DTVW01000507.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1186)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1186)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1186
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_160996"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..301)
                     /locus_tag="EYO87_06780"
     CDS             complement(<1..301)
                     /locus_tag="EYO87_06780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008193920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HIC65686.1"
                     /translation="MSQLFDLTGRIACVTGAGGGLGQAAASLLARSGAKVVGIARRRE
                     ALAAWQSRTGGETAIVAADLSDRAALAQIAADAARAFGDPDILINAAGINTRQPAD"
     gene            complement(309..>1186)
                     /gene="hisD"
                     /locus_tag="EYO87_06785"
     CDS             complement(309..>1186)
                     /gene="hisD"
                     /locus_tag="EYO87_06785"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009813026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HIC65687.1"
                     /translation="DHVVTCSPPRPGEGINPAIVYTADLCGADSILAMGGVQGVAAMT
                     FGLFGLPRADILVGPGNQFVAEAKRILFGRVGIDMFAGPTDSLILADAGADPFIVATD
                     LVSQAEHGYNSPVWLVTDDRHLAQEVMAQVPGLIADLPELNRKNAEAAWRDYAEVILC
                     ADREEMAATSDEYAPEHLTVQAADLDWWRDRLACYGSLFLGEETTVSFGDKASGTNHV
                     LPTSRAAKYTGGLSVHKYMKIVTWQQATREGARPVAEATARISRLEGMEGHARAADVR
                     LHKYFPDQTFDLSAG"
BASE COUNT          184 a          414 c          414 g          174 t
ORIGIN      
        1 aatcggcggg ctggcgggtg ttgatgccgg ccgcgttgat caggatgtcg ggatcgccga
       61 aggcccgtgc cgcatccgcc gcaatctgcg ccagcgcggc gcggtccgac agatccgccg
      121 cgacgatcgc ggtctcgccc cccgtccggg actgccacgc ggccagcgcc tcgcgccggc
      181 gcgcgatgcc caccaccttg gcgccggacc gcgccagcag cgaggccgcg gcctgcccca
      241 gaccgccgcc ggcgccggtg acgcaggcga tcctgccggt caggtcgaaa agctgcgaca
      301 tcgagggcct accccgcgct cagatcgaag gtttggtcgg ggaaatactt gtgcaggcgc
      361 acgtcggccg cgcgggcatg gccctccatc ccttcgagac gcgagatccg cgccgtcgcc
      421 tcggcgaccg ggcgcgcacc ctcgcgcgtg gcctgctgcc aggtgacgat cttcatgtat
      481 ttgtggaccg acagcccgcc cgtgtatttc gccgcgcgcg aggtcggcag gacgtggttc
      541 gtccccgacg ccttgtcgcc gaacgagacg gtcgtctcct cgcccagaaa aagcgagccg
      601 tagcaggcca gccggtcgcg ccaccaatcc agatcggcgg cctgcacggt caggtgctcg
      661 ggcgcgtatt cgtccgaggt cgcggccatt tcctcgcggt cggcgcacag gatcacctcg
      721 gcataatcgc gccacgcggc ctcggcgttc ttgcgattca gttccggcag atcggcgatc
      781 aggccgggca cctgcgccat cacctcctgc gccagatggc ggtcgtcggt aaccagccag
      841 accggcgagt tgtagccatg ctcggcctgg ctgaccagat cggtggccac gatgaaggga
      901 tcggcgccgg catcggccag gatcaggctg tcggtcggac cggcgaacat gtcgatgccg
      961 acgcggccga acaggatgcg cttggcctcg gcgacgaact ggttgccggg accgacgaga
     1021 atgtcggccc tgggcaggcc gaacaggccg aaggtcatcg ccgcgacgcc ctgcacgccg
     1081 cccatggcaa ggatgctgtc ggcgccgcac agatcggcgg tatagacgat cgcgggattg
     1141 atcccctcgc cggggcgggg gggcgaacag gtgacgacgt gatcaa
//
LOCUS       DTVW01000508            1779 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1610398, whole
            genome shotgun sequence.
ACCESSION   DTVW01000508 DTVW01000000
VERSION     DTVW01000508.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1779)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1779)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1779
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1610398"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
BASE COUNT          309 a          584 c          616 g          270 t
ORIGIN      
        1 aacgtcctga ccaagggttt cgacatcgac gccgaagcca ccggacagaa tatcgcgctg
       61 gaccagccgc aggtggatcg gctgcttgcc ggccagtcgc ggatcaggct ggcggcgcgg
      121 cgcgaccaga ccgggatcga actgagccgt ttcgatatca acgcccagcg gctgaccgcg
      181 caggcgcagg gctatctgaa cagcctgtcc agcgacgtga aggcgacgat ctcgatgcct
      241 tcgttgcagg acgccgatcc caacttctcg ggcgcgctgc aggccgaggc caatctgacc
      301 ggcgccgccg gggcgcggcg gttgtcggtc agtggcgagg cgaacgatct gaagatcggg
      361 atcgcggcgc tggacggagc ccttcagggg cgcaccagcc tggccatcat cgcggccgaa
      421 caggatggcg gctatcaggt cgagacgctg caattgtcaa acccgcaact ggatgccaag
      481 gccaagggaa gcttcgtgac gggcgcgctg gacgcgacgg cgaccttcga actgcccgac
      541 ctgtcggcgc tgcgctctga ttggcgcggc ggctttaccg cccgggccag cctgacggaa
      601 cgggacggca cgcgctttct ggatctgacc ggaaaaggcc aggatctcag cctcgggctt
      661 gccaatggca acgaggcgct gaccggcacc accgatctgg tggtcaaggc cgaggaaaag
      721 gacggcctga tcaccctgcg cgacctgcga ctggtgaatg accagttgaa cgcgacggcc
      781 cgcggcacct atggtcaggg cgaaaccgat ctgacggccc ggcttgacat cgcctcgctg
      841 gcgccgttcg ggccggattg gggcggatcg ctgaacgccg atgcgacgct ggtgcagcgc
      901 caggacggca tccggcgcct ggatctgagc ggcaccgccc gcgatctggc catcggccag
      961 ccgcaggtgg acggcgcctt ccggggagag acccggcttg ccgtcaaggc cgaagaggac
     1021 aagggcacgg tcacgttgcg ggacgtgcgg atttcgaacc cgcagctttc ggccaccgca
     1081 agcggcgtct atggcaaggg cgtgaccgac ctgacggctt ccgcgcagat cgcgtcgctg
     1141 gcctcgttcg gccccggctg gcgcggcacg atgaccctgg acgggacctt ccgtgaaagc
     1201 ggcgatggcg cgcggcggct ggcggtgcgc ggcagcgggc aggatctgtc cttcgggcag
     1261 gcgcaggtcg atggcgcgct ggccggcgag acccggctgt cggtgatggc tgtcgaacgc
     1321 gacggtgtct tcaccatcga tcaggcacag ctggaaaatc cccgcctcag cgcgaatgcg
     1381 accggcaccc ttggcggcgg caagaccgac atctctgcgc agttgaacgc cgccgacctg
     1441 cgctttctgg gcaatgggat ccgcggctca ctgagcgccg atgcaagtct ggtcgaagaa
     1501 aacggcctgc gccggatcac cgcgaccggc cgcgcgaacg ggctggctat cgggcaggac
     1561 cggatcgatc cgatcctgcg cggccagacc ggcttcgacg tggcggcgac gcaatcggcg
     1621 tcgggcctgt ccttccagcg ccttcaggtc cgcaatccgc agttgcgggt cgatgcccag
     1681 aatatcgatc tgctcacgcc catccagtcc cagctcggcg acattcttgc cgtcgagctc
     1741 gtagcccacg cacagcttga tcgtttccag accatcgag
//
LOCUS       DTVW01000509            1166 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1613043, whole
            genome shotgun sequence.
ACCESSION   DTVW01000509 DTVW01000000
VERSION     DTVW01000509.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1166)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1166)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1166
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1613043"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
BASE COUNT          168 a          379 c          378 g          241 t
ORIGIN      
        1 gaggatgctc tcctgcgctt ggtctcacgg gtttattcag tcttcctgtc gcgccaaaca
       61 gatgagcagg ctaagagcat catgatcgat gccctttcgc gagctgtcga actgaaccag
      121 agagctggac gcagagagca ccttccgggg cggctaaagt cgtcgacata tctttcatct
      181 cccgagttcc taacaccgga gtctgatagg gttagggaga agcagatcct ggatacagtt
      241 ggtcgctgca tccagaaaac aatcggaagt catgatattc cgaagaaaca ggtagcagca
      301 ttgagttccg ggtagcatga tcccgccatg aggccagatg cactaacttg cacatagcag
      361 tcgatggcga tgcgcaacgt ttggataagg ccgcgtgcat ctttggcacg gccttatctc
      421 attgaactat gcttgcgggt gggtctccca ccacgcggaa tgcgtcagga tcgaaccgcg
      481 ccctttttcg gtatcagcgt cccagcgacc accagccgcg gcgcttgcgc cgcgtagtgt
      541 cagagcctgc ggtctcggcc aactcgggct ctcgggtttc gaccggctgg tcgggcccgg
      601 tcgtctcggc cgccccatcc tcggccgtct gggcgggcgg tgtcgtctgg ggctgcaccg
      661 gcgccggtgg cgcttcggca gggatttccg ggactgcaga atctgcggtc ctgggggcct
      721 cggacggttc cgccgtcaca gcttcctgcg cggcatccgg gccgggcagg ccctcggcca
      781 gggtttcttc ggcatgatcg cgcagatcca cgacttcggg caggcctttg gcctgggatg
      841 cgcctgcggc gtcgtccgcc ttgcggcccc gcgaacgcga tcggcggccc cgcgaggcgg
      901 gcttgcctgc gaccgcttcg tcgctgtcgc cggtctcagg ctggccgtca cgctgcccgt
      961 caggtcgtgg ctgcccggta tcggcggctt cgttttccga cggttggcgg cctgcgatct
     1021 cgtcgctgtc actgtcgctg tcggcgctcc gtcccgcctc atccgcatgg gacgaggatt
     1081 tccgccgccg gcgccgccgg cgcttgcgcg agcggccgcc ctcgtcgtcc tcgtcctcgc
     1141 cctcggcatc cggggcggtc tgcgac
//
LOCUS       DTVW01000510            2351 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1613173, whole
            genome shotgun sequence.
ACCESSION   DTVW01000510 DTVW01000000
VERSION     DTVW01000510.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2351)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2351)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2351
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1613173"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..512)
                     /locus_tag="EYO87_06790"
     CDS             complement(<1..512)
                     /locus_tag="EYO87_06790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_353079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase"
                     /protein_id="HIC65688.1"
                     /translation="MIHHSGQDWLRAANRRVLLFGMSGLGKTHLSNMLRASGEWFHYS
                     VDYRIGTRYMGEYIADNFKHEAMKVPFLRDLLLSDSVYIASNITFDNLAPLSTYLGKP
                     GSPSRGGLPFDEYHQRQDQHRRAEIAALLDTHHFMSRAIRIYGIPHFVCDSGGSICEV
                     VDPDDPDDPVL"
     gene            complement(740..1930)
                     /locus_tag="EYO87_06795"
     CDS             complement(740..1930)
                     /locus_tag="EYO87_06795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010393035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic hydrocarbon degradation protein"
                     /protein_id="HIC65689.1"
                     /translation="MRYTLTGAATLLLSASPLLAGGIERAPQSLSPLFEDGNYAELSF
                     GGVDPTVEGKDRTPAAAGGPYNTGDVAQGYGFVGLAYKHQFTPSISGAIIIEQPFGAD
                     IRYPTQPGAIPDPGQDGSLLLGGTSAKVDSTTFTALGRYKFQNNFSVHGGIRGSRADG
                     KVSLNGAAYGPVAGYSVDLDTDTAVGWVAGAAWEKPEIAARVSLTYNSEVEHEFDTTE
                     SGPLVDPDGAGPLPALPLLTGTSMTKVKTPESWNLEFQTGVAPDTLVFGSIRWVNWSE
                     FRVDPRNFTAVTGGGLVSLEDTTTYTLGVGRKFTDAWSGSASFTYEKAGNDLVSPLAP
                     TNGRKGITLAAIYTRDNMKITTGVNYTKLGDARPETGTPDTARADMKGNDAWGVGMRI
                     GYSF"
     gene            2163..>2351
                     /locus_tag="EYO87_06800"
     CDS             2163..>2351
                     /locus_tag="EYO87_06800"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005853192.1"
                     /note="catalyzes the synthesis of xanthosine monophosphate
                     by the NAD+ dependent oxidation of inosine monophosphate;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HIC65690.1"
                     /translation="MQIREALTFDDVLLVPAASTVMPSTADVATQVTRTIRMNIPLLS
                     SAMDTVTESRMAIAMAQAG"
BASE COUNT          393 a          737 c          786 g          435 t
ORIGIN      
        1 aggaccggat cgtcgggatc gtccggatcg accacctcgc agatcgagcc gccgctgtcg
       61 cagacgaaat gcggaatgcc gtagatccgg attgcgcggg acatgaagtg atgggtgtcc
      121 agaagcgccg cgatctcggc ccggcggtgc tggtcctgac gttggtgata ttcgtcgaaa
      181 ggcaggccgc cgcggctggg gctgccgggc ttgccgagat aggtcgatag cggcgccaga
      241 ttgtcgaagg tgatgttgct ggcgatatag acgctgtcgg atagcagcaa gtcacgcagg
      301 aacggaacct tcatcgcctc gtgcttgaag ttgtcggcga tatattcgcc catgtagcgg
      361 gtgccgatgc ggtaatcgac cgaatagtga aaccactctc ccgaggcgcg cagcatgttc
      421 gacagatggg tcttgcccag tcccgacatg ccgaacagca gaacgcgccg gttcgctgcc
      481 cgaagccagt cctggccgct gtgatggatc atgtgccgcc ccgtccttgg tttcggactt
      541 ggtaatccgc ggcgcgccca agggaaaggg gcgggcgtca agccagcgca ggtttcggtg
      601 cggccatgac cggtgcgggg acggccgggg tggcgccgcc cggcccggag cggcatcggc
      661 gacagccttg caccagggcg ggctggcgga aaggccccga cgatgcggcg ggcctttccg
      721 tttcttcctg gtcgggcgat cagaaactgt agccgatcct cattcccacg ccccaggcgt
      781 cattgccctt catgtccgcg cgcgcggtgt cgggtgtgcc ggtttccggc ctcgcatcgc
      841 cgagtttggt atagttgacg ccggtggtga tcttcatgtt gtcgcgcgta tagatcgccg
      901 ccagcgtgat gcccttgcgc ccgttggtcg gggccagcgg cgaaaccaga tcattcccgg
      961 ccttctcata ggtgaacgag gccgaaccgg accaggcatc ggtgaacttg cgacccacgc
     1021 caagcgtgta ggtggtggtg tcctccaggc tgaccagtcc gccaccggtc acggcggtga
     1081 agttgcgcgg atcgacccgg aattcggacc agttcaccca gcggatcgat ccgaagacca
     1141 acgtatccgg cgcgacgccg gtctggaatt ccaggttcca gctttccggg gtcttgacct
     1201 ttgtcatgga ggtgccggtc agcagcggca gggccggcag cggcccggcc ccgtcgggat
     1261 cgaccagcgg gccggattcg gtcgtgtcga attcatgctc gacctcggaa ttgtaggtca
     1321 gcgagacgcg ggccgcgatc tcgggctttt cccaggcggc gccggccacc cagccgacgg
     1381 ccgtgtcggt atccagatcg accgaatagc ccgccaccgg accataggcc gcgccgttca
     1441 ggctgacctt gccgtcggca cgcgacccgc ggatgccgcc atgaaccgag aaattgttct
     1501 ggaacttgta gcgtccgagc gcggtgaagg tggtggaatc caccttcgcg ctggttccgc
     1561 ccagaaggag cgacccgtcc tggcccggat ccgggatcgc gccgggttgc gtcggataac
     1621 ggatatcggc gccgaagggc tgttcgatga tgatggcgcc ggaaatgctg ggcgtgaact
     1681 ggtgcttgta ggccagaccc acgaagccgt agccctgcgc cacgtcgccg gtgttgtagg
     1741 ggcctccggc cgccgctggc gtgcggtcct tgccctcgac cgtcggatcg acgccgccaa
     1801 agctgagctc ggcgtagttt ccgtcttcga acagcgggct cagcgattgc ggcgcgcgtt
     1861 cgatcccgcc tgccagcagg ggcgatgcgc tcagcagcag ggtggccgcg ccggtcagtg
     1921 tatatctcat aagttgtcct ccctagacgg atcaaccgat ccaggttgtc accttacggg
     1981 acttcgtgat gcaatcaatc gtgccggccc gatgacgcaa cgttctgatc tcgctgacct
     2041 gggggcagcg tgtctttgct gcaacgcagc ccggcggccg gcgccggttc ttcggctctg
     2101 gacaatcggc gccgcgcgtg aaaggggaaa ctgccaaacg aacttgccgc aaggatgacc
     2161 ccatgcagat tcgtgaggcc ctgacctttg acgatgtcct tctggttccc gccgcctcga
     2221 cggtgatgcc ctcgaccgcc gatgtcgcga cccaggtcac gcgcaccatc cggatgaaca
     2281 ttccgcttct gtcctcggcc atggacacgg tgaccgaaag ccgcatggcc atcgccatgg
     2341 cgcaggcagg c
//
LOCUS       DTVW01000511            1399 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1615170, whole
            genome shotgun sequence.
ACCESSION   DTVW01000511 DTVW01000000
VERSION     DTVW01000511.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1399)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1399)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1399
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1615170"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1399)
                     /locus_tag="EYO87_06805"
     CDS             complement(<1..>1399)
                     /locus_tag="EYO87_06805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011910624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65691.1"
                     /translation="KPWVFRYKDLRAWWSNPHFNRPGGVESGTPTAWIPQLKPVWFTE
                     LGCPAIDRGTNQPNVFFDPKSSESFTPYFSRGWRDDAIQRAYLEASYLWWDTPANNPV
                     SAIYGGRMVHVPECAACTWDARPYPFFPELTGVWTDGPNWRLGHWLTGRLGAVSLAAL
                     VRHLCLRAGLTENLIDVSGLWGAVEGYVIGALESPRASISTLARHFGFDAIETEGVIR
                     FVMRGRASVATLAIDDLVASREDEAFELTRGQETELPQALKWQVARADEDYDAALVEA
                     RRITVDTTRIASESFPMAIPPEEAERRCRRALMEAWIGRESATFRLPPSHLALDPADV
                     IRLAHDGREVEFRLVSVADAEARGIEAVRQDRAAYDLPPGDPRPASLASPVVFGTPEV
                     VMLDIPQISEDQPAHRPLIAAHASPWPGEIAVFRSASTDGFNLLTTFGSRARIGTLAF
                     DLFPGPTSSFDLGNAL"
BASE COUNT          243 a          456 c          494 g          206 t
ORIGIN      
        1 agtgcgttgc cgagatcaaa gcttgaggtc ggccccggaa agaggtcgaa ggccagcgta
       61 ccgatccgcg cccgactgcc gaaggtcgtc aggaggttga acccgtcggt ggacgcgctg
      121 cggaacaccg cgatctcgcc tggccagggg ctggcatggg ccgcgatcag ggggcgatgc
      181 gcgggctggt cctccgaaat ctgcggaatg tccagcatca ccacctcggg cgtgccgaag
      241 acgacggggc tggccagcga ggcagggcgg ggatcgccgg gcggcaggtc gtaggcggca
      301 cggtcctgcc gcaccgcctc gatcccgcgt gcctcggcat cggcgacgga gacgaggcgg
      361 aattccacct cacggccatc atgcgcgagc cggatgacgt cggcggggtc cagcgccagg
      421 tgggacggcg gcaggcggaa ggtcgcgctt tcgcgtccga tccacgcctc catcagcgca
      481 cggcggcagc ggcgttcggc ctcctcgggc gggatcgcca tcgggaagct ttccgaagcg
      541 atgcgggtgg tgtcgacggt gatgcggcga gcttcgacca gcgcggcgtc atagtcctca
      601 tccgcccgcg cgacctgcca tttcagggct tggggcagtt cggtctcctg gccgcgggtc
      661 agctcgaagg cctcgtcctc gcggctggcc accagatcgt cgatggccag cgttgcgaca
      721 gaagcccgtc cgcgcatgac gaagcggatc acgccctcgg tctcgatggc atcgaacccg
      781 aaatgacggg ccaaagtgga aatcgacgcg cggggacttt ccagcgcgcc gatcacatag
      841 ccctcgaccg cgccccagag gccggaaacg tcgatcaggt tctccgtaag cccagcgcgc
      901 aggcagaggt ggcgcacgag ggccgccagc gacaccgcgc ctagcctgcc ggtcagccag
      961 tggccgagcc gccagttcgg gccgtccgtc cagacgccgg tcagttcggg gaagaacgga
     1021 tagggtcgcg cgtcccaggt acaggcggcg cattccggaa catgcaccat ccgtccgccg
     1081 tagatcgcgg acaccggatt gttagccggg gtgtcccacc agaggtaact ggcctcaaga
     1141 taggcacgct ggatggcgtc gtcgcgccag ccccgcgaaa agtagggcgt gaagctctcg
     1201 gacgacttcg ggtcgaagaa gacattcggc tggttggtgc cccggtcgat ggcggggcaa
     1261 ccaagctcgg taaaccagac cggcttcaac tgcggtatcc atgcggtggg cgtgccgctt
     1321 tccaccccgc ccggccggtt gaaatgcggg ttcgaccacc aggcacgcag atccttgtag
     1381 cggaagaccc acggcttgc
//
LOCUS       DTVW01000512            1019 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1616881, whole
            genome shotgun sequence.
ACCESSION   DTVW01000512 DTVW01000000
VERSION     DTVW01000512.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1019)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1019)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1019
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1616881"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..281
                     /locus_tag="EYO87_06810"
     CDS             <1..281
                     /locus_tag="EYO87_06810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011282283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HIC65692.1"
                     /translation="KPETIADGPGRAVYLQGDLSDEEFVREVVGRAQDHAGRFDYLVN
                     TVGVWWGEKDVSVVDIERDVWDLVFDINLGSMMLTARHAVPAMQATGV"
     gene            complement(245..>1019)
                     /locus_tag="EYO87_06815"
     CDS             complement(245..>1019)
                     /locus_tag="EYO87_06815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013639177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HIC65693.1"
                     /translation="WAIGDKDEVDKVFDGAHHVTSIDIVNNRLIPNAIEPRVAIGEYE
                     ASTEDYTLYTATQIPHVVRLLMGAFVLQIPEHKLRVVSPDVGGGFGSKTFHYAEEALV
                     TWAAAQIGRPVKWCAERSESFMSDAHGRDHVTHAELALDADGKFIGLRAKTLANLGAY
                     LSTFAPAVPTYMHAVLLAGVYTTPMIYCNVIGVYTHTVPVDAYRGAGRPEATYILERL
                     IDRAAREMGISQVEIRRKNFIQPDAFPYQTPVACMAGTA"
BASE COUNT          196 a          290 c          333 g          200 t
ORIGIN      
        1 cgaaacctga aacgattgct gatggccccg gccgcgcagt ttatctgcaa ggcgatttga
       61 gcgatgagga attcgtccgt gaggtggtcg gccgggcaca ggaccatgcc gggcgtttcg
      121 attatctggt caacacggtc ggcgtctggt ggggcgaaaa ggacgtctcg gtcgtcgata
      181 tcgagcgcga cgtgtgggac ctggtgttcg acatcaatct cggctcgatg atgctgacgg
      241 cgcgtcacgc ggtgccggcc atgcaggcga ccggcgtttg ataggggaag gcatcgggct
      301 ggatgaaatt cttgcgccgg atttcgacct ggctgatacc catttcgcgg gccgcccggt
      361 cgatcagccg ttccagaata taggtggctt cgggccgccc ggcgccccgg taggcatcga
      421 ccggaaccgt atgggtgtaa accccgatca cgttgcaata gatcatcggc gtcgtataaa
      481 ccccggccag aaggaccgca tgcatatagg tgggaaccgc cggcgcgaag gtggacagat
      541 aggcgccgag attggccagg gttttcgccc ggagcccgat aaacttgcca tcggcatcca
      601 aggccaactc ggcatgggtc acatgatcgc ggccatgggc atcggacata aagctttccg
      661 aacgttccgc gcaccatttc accggccgcc cgatttgcgc cgccgcccag gtgaccaggg
      721 cttcctcggc ataatggaag gtcttggagc cgaagccgcc gcccacatcg ggggatacga
      781 cgcgcaattt atgctccggt atctgcagca cgaaggcgcc catcagcaaa cggaccacat
      841 gcggaatctg ggtggcggtg tagagggtgt aatcctcggt tgaggcttcg tactcgccga
      901 tcgccaccct cggctcgatg gcgttgggga tcaggcggtt attgacgatg tcgatgctgg
      961 tgacatggtg ggcgccgtca aagactttat cgacctcgtc cttgtcgccg atggcccag
//
LOCUS       DTVW01000513            1022 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1617897, whole
            genome shotgun sequence.
ACCESSION   DTVW01000513 DTVW01000000
VERSION     DTVW01000513.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1022)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1022)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1022
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1617897"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..838)
                     /locus_tag="EYO87_06820"
     CDS             complement(<1..838)
                     /locus_tag="EYO87_06820"
                     /inference="COORDINATES: protein motif:HMM:PF00361.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65694.1"
                     /translation="MGGGHRRRHRRYLAVVTRSQRERLVNLVSLAPLLILLPLGTAAL
                     LTGLSGRAVLARSVAVACLCGQLLLVVVVYLGFEAPLSAFEASWLPVLGTQIHLSVDG
                     ISVHALMVLAAVLAVAIVAEIRLQPGDGSAARLALIFFVVAAMNVFLMSRDLLVAAAA
                     HGTAGLALAALLGVGSDLAGQSAARRFANWAIAGTLLLSTSAAILAAGAGSTVIDDLT
                     RIAPGPARIAAPLLAAALAIQLPLVPLHTWLAPAAAAGTLAGRTLIFGAWCTADAFGL
                     LRF"
BASE COUNT          210 a          350 c          358 g          104 t
ORIGIN      
        1 cgaagcgtaa caatccaaag gcgtcagcag tacaccaggc accaaagatt agggtccgac
       61 cagcgagggt accggcggca gcggcgggag ccagccacgt gtggagtggg accagaggca
      121 gctgtatggc taaggccgcc gccagcaaag gtgcggcgat acgggccggc ccgggtgcga
      181 tgcgggtaag gtcgtcgatg acggtggacc cggcacccgc cgccaagatc gctgccgagg
      241 tgctcagcag cagggttccg gcgatggccc agttggcgaa gcgccgcgcc gccgactggc
      301 cggccaggtc cgagccgaca ccgagcagcg ccgccagcgc cagtcccgcc gtgccgtgcg
      361 ccgccgccgc gaccagcaga tcgcgggaca tgaggaacac gttcatggcg gccacgacga
      421 agaagatgag ggccaggcgc gccgccgaac cgtctccagg ctgcaggcgg atctcggcga
      481 ctatggccac ggcgagcacc gccgccagca ccatgagtgc atggacgctg atgccgtcga
      541 cagacagatg gatctgggtg ccgaggacgg gcagccacga cgcctcgaag gccgacagcg
      601 gcgcttcgaa gcccaggtaa acgacgacga cgagcagcaa ttgtccgcag aggcaggcaa
      661 cggcgacgct tcgggccaac accgcacgcc cggacagccc cgtcagcagc gctgccgtcc
      721 ccaggggcag caggatcagc aatggtgcga gggagacgag gttcaccagg cgctccctct
      781 ggctccgagt gaccacagca agataccgac ggtgccgacg acggtggcca ccgcccatcc
      841 ggagaggccg tcatgaagcc ttgccagcag ccagccggct gcccgcacac ccaggttcaa
      901 caggacgggc acgcccccgg ccagaacgcc gtcgatggcc gtccagacaa aacggccggt
      961 ggcttcggcg gcggcgccgc acgcggtcag gatccgcgag acgccgaagc catcggccat
     1021 ca
//
LOCUS       DTVW01000514            2450 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1618895, whole
            genome shotgun sequence.
ACCESSION   DTVW01000514 DTVW01000000
VERSION     DTVW01000514.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2450)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2450)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2450
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1618895"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..931)
                     /locus_tag="EYO87_06825"
     CDS             complement(<1..931)
                     /locus_tag="EYO87_06825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011567674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine cyclodeaminase"
                     /protein_id="HIC65695.1"
                     /translation="MPVPKPSDLAYVPFVSVENMMRLIHCIGLSRMLEGLATYIEDDF
                     RRWQDFDKTPRVAAHSEDGVIELMPTSDGQTYGFKYVNGHPKNTRDGRQTVTAFGLLA
                     DVGNGYPVLLTEMTILTALRTAATSALVAKYLAPAGADTMAMIGNGAQSEFQALAMQA
                     LCGITRLRLYDIDPKATAKTMRNLAGQGFDLSACKTPQEAVEGAQIITTCTADKQYAT
                     ILSDNMVGAGVHINAIGGDCPGKTELHPDILSRADVFVEYPPQTRIEGEIQQMPQTFP
                     VTEFWQLVAGQAQGRRDARQITLFDGVGFAIEDF"
     gene            1059..1505
                     /locus_tag="EYO87_06830"
     CDS             1059..1505
                     /locus_tag="EYO87_06830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018237122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HIC65696.1"
                     /translation="MSIQDDARQSLDDHDRRLIGLLRHDGRAPVSKLAQIMGLSRGTV
                     QSRLDRLLASGTLLGFTARVREDGEGNAVRAVMMIEVEGRTTTHVISRLRGLPQLRRI
                     HTTSGKWDLVAEIAVENLVEFDRVLREVRMIQGVRNSETSILLTSI"
     gene            complement(1535..>2450)
                     /locus_tag="EYO87_06835"
     CDS             complement(1535..>2450)
                     /locus_tag="EYO87_06835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014879161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hybrid-cluster NAD(P)-dependent oxidoreductase"
                     /protein_id="HIC65697.1"
                     /translation="ELPLPQGTLHRTFTISSSPSRPMSISVTVKAQPGSLGTRWMLDH
                     LKPGMRIRATRPAGRFSSHHHPSEKYLFISAGSGITPMMSMTTWMFDLGRPADVVFVN
                     CARRPSDIIFRRRLEHMASRFPEISLRFVVEETDRFQPWTGYQGMFNQLMLGLMAPDY
                     LTREVFCCGPEPFMQAVRDALAGLGFDMARYHQESFHPSLAEEALDPVLGDVVPDQAA
                     EAEIAFALAGVSRTCSETDTILATARSAGLNIPSGCTFGVCGTCRIRKLSGQVHMVHN
                     GGITDEDIEAGYVLACCSHPIGKVEVEV"
BASE COUNT          440 a          753 c          813 g          444 t
ORIGIN      
        1 agaaatcctc gatcgcaaag cccaccccgt cgaacagggt gatctggcgc gcatcgcggc
       61 ggccttgtgc ctgtcccgcg acgagctgcc agaattcggt cacgggaaag gtctgcggca
      121 tctgctggat ttcgccctcg atgcgggtct ggggcgggta ttcgacgaag acatcggcgc
      181 gcgacaggat gtcgggatgc aattcggtct tgccggggca gtcgccgccg atggcgttga
      241 tgtggacccc ggcgccgacc atgttgtcgg acaggatcgt cgcatattgc ttgtcggcgg
      301 tgcaggtggt gatgatctgt gcgccctcga ccgcctcctg cggggttttg caggcggaca
      361 ggtcgaaacc ttgtccggcc aggttgcgca tcgtcttggc ggtcgccttc gggtcgatgt
      421 cgtacagccg aagccgggta atcccgcaca gggcctgcat cgccagcgcc tgaaattcgg
      481 attgggcgcc attgccgatc atcgccatcg tgtcggcccc ggcgggcgcc agatatttcg
      541 ccaccagcgc cgaggtcgcc gccgtccgca gggcggtcag gatggtcatt tccgtcagca
      601 ggaccggata gccgttgccg acatcggcca gcaggccgaa ggcggtgacg gtctggcgtc
      661 cgtctcgcgt gttcttggga tggccattca catatttgaa gccataggtc tgcccgtccg
      721 aggtcggcat caactcgatc acgccatcct cggaatgggc cgcgacgcgc ggggtcttgt
      781 cgaaatcctg ccagcggcga aaatcatcct cgatataggt cgcaaggccc tccagcatcc
      841 gggacaggcc gatgcaatgg atcagccgca tcatgttctc gacgctgaca aagggcacat
      901 aggccagatc cgatggtttc gggacgggca tggttcatcc tttcggtcag atttcgccat
      961 tctccacggc gcagtctgca tgcaacaggc cgaacttgcc ggaatcttgc gggtcggcta
     1021 tgcattttgc gacctgatat tgcgcaggat gacatcttgt gtccatccaa gacgatgcca
     1081 gacagagcct cgacgaccac gaccggcggc tgatcggtct gctgcgccat gacggccggg
     1141 cgccggtgtc gaagctggcc cagatcatgg ggctgtcacg cggcacggtg cagtcgcggc
     1201 tggatcgttt gctggcctcg ggcacgctgc ttggcttcac cgcgcgggtt cgcgaggacg
     1261 gcgagggaaa cgcggtgcgc gcggtaatga tgatcgaggt cgagggtcgc acgacgacac
     1321 atgtcatcag cagattgcgc ggcctgccgc aattgcgccg gatccatacg accagcggca
     1381 aatgggatct ggtcgccgag atcgcggtgg aaaacctggt cgaattcgac cgcgttctgc
     1441 gcgaggtccg catgatccag ggcgtccgca acagcgagac aagcatcctg ctgacctcga
     1501 tctaaggccc tgggtcacac gggcgcgggt cccctcagac ctcgacctcg accttgccga
     1561 tcgggtgcga gcagcaggcc agcacgtaac ccgcctcgat atcctcgtcg gtgatgccgc
     1621 cattgtggac catgtggacc tggccggaca acttccggat ccggcaggtg ccgcagaccc
     1681 cgaaggtgca gcccgagggg atgttcagcc cggcggaccg cgcggtcgca aggatcgtgt
     1741 cggtttccga gcaggtccgg ctgacgccag ccaaagcaaa ggcgatctcg gcctcggcgg
     1801 cctgatcggg cacgacatcg ccaaggaccg ggtccagggc ttcctcggcc agcgaggggt
     1861 ggaagctttc ctgatgatag cgcgccatgt cgaagcccag ccccgccagc gcgtcgcgca
     1921 ccgcctgcat gaagggttcg gggccgcagc agaacacctc tcgtgtcagg taatccggcg
     1981 ccatcaggcc cagcatcaac tggttgaaca tgccctgata gccggtccag ggctgaaagc
     2041 ggtcggtttc ctcgacgacg aatcgcaggc tgatttccgg aaaacggctg gccatgtgtt
     2101 ccagccggcg gcggaagatg atgtcggagg ggcgcctggc gcaattgacg aaaaccacgt
     2161 cggcgggccg gcccagatcg aacatccagg tcgtcatcga catcatcggc gtgatccccg
     2221 acccggccga gatgaacagg tatttctcgg acggatggtg gtggctggaa aagcgcccgg
     2281 ccggtctggt ggccctgatc cgcattcccg gtttcagatg gtccagcatc cagcgcgtgc
     2341 caagactgcc aggctgcgcc ttgaccgtga ccgagatcga catcggccgc gaaggcgagg
     2401 acgagatggt gaaggtccgg tgaagcgttc cctgcggcag cggcagttcc
//
LOCUS       DTVW01000515            2202 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1619504, whole
            genome shotgun sequence.
ACCESSION   DTVW01000515 DTVW01000000
VERSION     DTVW01000515.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2202)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2202)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2202
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1619504"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..492
                     /locus_tag="EYO87_06840"
     CDS             <1..492
                     /locus_tag="EYO87_06840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_354494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3883 domain-containing protein"
                     /protein_id="HIC65698.1"
                     /translation="QIWIGPPPTLSNQPPPQELDQMLHIARKFDVAGRDERNRALGRA
                     GEERVLAHERAALRTAGRDDLARKVRWVSEEDGDGAGYDIASFAPDGLPRLIEVKTTN
                     GWERTPFHITRNELAVADERRSEWRLFRLWNFSREPKAFELHPPLDAHVSLTATTFQA
                     SFH"
     gene            complement(496..879)
                     /locus_tag="EYO87_06845"
     CDS             complement(496..879)
                     /locus_tag="EYO87_06845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007425817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65699.1"
                     /translation="MMKPDESIQIFVPLKVRKQNGRPKIMPPATYLPSEDRTQDPHIL
                     RAIGRAWGWRRRMEAGEFNTVTDLAKAVGLAERHVSRQLRLAYLAPGVLKRLVYKREV
                     PAVTLLKLTDVAALPWHEQPERVFD"
     gene            complement(876..1004)
                     /locus_tag="EYO87_06850"
                     /pseudo
     CDS             complement(876..1004)
                     /locus_tag="EYO87_06850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748368.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="resolvase"
     gene            1073..1414
                     /locus_tag="EYO87_06855"
     CDS             1073..1414
                     /locus_tag="EYO87_06855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65700.1"
                     /translation="MVADKLRSVFRRHRMLARGGMTVGLTRSGDDIATLFVPGKGTID
                     IKGENRIQIIQRLVDAHNNGPTPMSTKDLVKGIAEDQSLSNIFKQPLWDKLKANFLRS
                     LGAKGPWEIAI"
     gene            1508..1753
                     /locus_tag="EYO87_06860"
     CDS             1508..1753
                     /locus_tag="EYO87_06860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65701.1"
                     /translation="MPTPFPPRQTAQSSWSGAAKTKPTTHNSEWRCTRCDKLLGVCRD
                     GRMHLRFARGHEYLVGFPVQATCRGCGTLNHATAPAR"
     gene            1853..>2202
                     /locus_tag="EYO87_06865"
     CDS             1853..>2202
                     /locus_tag="EYO87_06865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018303656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HIC65702.1"
                     /translation="MSFAWHEIRDHLMHSSTNLHFQRSFDAVRRAQAALAPFRDPAAL
                     LDGLHRTPGDQGQKNVILSALVRAAQGDGPASDCALTLLLLALWPGLDAIRRRSIWRR
                     IGTTDEIASDMLART"
BASE COUNT          387 a          759 c          702 g          354 t
ORIGIN      
        1 cagatctgga tcgggccgcc gccaacgcta tcgaaccagc cgccgccgca ggagctggac
       61 cagatgctgc acatcgcccg caagttcgac gtggcgggcc gggacgagcg caatcgggcc
      121 ctcggacgcg cgggcgagga gcgcgtgctg gcgcatgagc gcgcggcatt gcggacggca
      181 ggacgggacg atctggcgcg caaggtgcgc tgggtgtcgg aggaggatgg cgatggcgcc
      241 ggctacgaca tcgcgagttt cgccccggac gggctcccgc ggctgatcga ggtcaagacg
      301 acgaacggat gggagcgcac acccttccac atcacccgca acgagctcgc ggtggccgat
      361 gagcgccggt cggaatggcg tctgttccgg ctctggaatt tctcacgcga gccaaaggcg
      421 ttcgaactgc acccgccact ggacgcgcat gtctcgctga ccgcaacgac gtttcaggcg
      481 agctttcact gaggctcagt cgaacacccg ctccggctgt tcgtgccatg gcagggccgc
      541 gacatcggtc agtttcaaca gggtcacggc gggcacctcg cgcttgtaga ccaagcgctt
      601 gaggaccccc ggcgcgaggt aggcaagccg cagctgtcgg ctgacatggc gttcggcaag
      661 ccccacggct ttcgccagat cggtgaccgt attgaactca ccagcctcca tgcgccgccg
      721 ccagccccaa gcccggccga tggcgcgcag gatatgcgga tcctgagtcc ggtcttcgct
      781 gggcagatag gtggcgggcg gcatgatctt cggccgcccg ttctgcttgc ggaccttgag
      841 cggtacgaag atctggatgg actcgtcggg tttcatcatt ccgccgccac cttctttcgt
      901 ggcgccatca tgtcgcgcat gacgcccgag acgccgtcgg tccggacatc gatgaccagc
      961 ccctccgacg tcaccgtcac ccgccgcacc agcaactgca cgaccgtgcc tggcggccaa
     1021 tgttctgacg ccgcttgttg atcagatcga caccaagcaa gccgaaatcg cgttggtcgc
     1081 agacaagctc cggtccgtgt tccggcgaca tcggatgttg gcccgtggtg gcatgacggt
     1141 cggactcacc cgtagcggcg atgatatcgc gaccctcttc gtgccaggga aaggcaccat
     1201 cgacatcaag ggcgaaaacc gcatccagat catccagcgg ctggtcgatg cccacaacaa
     1261 cggcccgacg ccgatgtcga ccaaggatct tgtcaaggga atcgctgaag accagtccct
     1321 gtcgaacatc ttcaagcagc cgctgtggga caagctgaag gccaactttc tgagaagtct
     1381 tggcgccaaa gggccgtggg agatcgcaat ctgacagctg gctccgatcc ggctccgttt
     1441 ggggggtctg acgggctccg attcttcagg ccaatgggag tgctccatcg atcagaggag
     1501 cacttccatg ccgactccct tccccccgcg ccagacagcc cagtcgagct ggtccggcgc
     1561 cgcaaagacc aagcccacca cccacaactc ggaatggcgc tgcacgcgct gtgacaagct
     1621 gctcggcgtc tgccgggacg gccgcatgca cctgcgcttc gcgcgggggc acgagtatct
     1681 cgtgggcttc ccggttcagg caacctgccg cggctgcggc acgctgaacc acgcgaccgc
     1741 gcccgcgcgc tgactcgcgc attcacccaa tcccccgaaa tcgcagagac gcgcgacgtc
     1801 ctgacctggc cacgagaagg cgccggacgc ctggccgcaa ggcaggcgtc cgatgtcctt
     1861 cgcgtggcac gagatccgtg atcacctcat gcattcatcc acgaaccttc acttccagcg
     1921 cagtttcgac gccgtccggc gtgcgcaggc cgccctcgca ccgttccggg atccggcggc
     1981 cctgctggac gggctgcacc gcacgcccgg cgatcagggc cagaagaacg tgatcctctc
     2041 cgcgctggtc agggcggcgc agggcgacgg gcccgcgtcc gactgcgccc tgacgctgct
     2101 gttgctggcg ctctggcccg gcctcgacgc catccgccgc cggtcgatct ggcgcaggat
     2161 cggcaccacc gacgagatcg cgtccgacat gctggcgcgc ac
//
LOCUS       DTVW01000516            2794 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1620491, whole
            genome shotgun sequence.
ACCESSION   DTVW01000516 DTVW01000000
VERSION     DTVW01000516.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2794)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2794)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2794
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1620491"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..813
                     /locus_tag="EYO87_06870"
     CDS             <1..813
                     /locus_tag="EYO87_06870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009571321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase A"
                     /protein_id="HIC65703.1"
                     /translation="NTGIGLALVGASMGFRSVIVIPETQSQEKKDMLRLAGAILVEVP
                     AAPYKNPNNYVRYSGRLAEALARTEANGAIWANQFDNTANRQAHLETTGPEIWDQTDG
                     KVDGFICAVGSGGTLAGVAMALQPRGVRMGLADPEGAALYSFYTTGEFDSPGSSITEG
                     IGQGRITRNLEGFTPDYAYRIPDAEALPVVFDLLKEEGLCLGGSSGINVAGAIRMARE
                     MGPGQTIVTVLCDYGNRYQTKLFNPEFLRAKDLPVPDWLTREAPDLPEVFEG"
     gene            820..>2794
                     /locus_tag="EYO87_06875"
     CDS             820..>2794
                     /locus_tag="EYO87_06875"
                     /inference="COORDINATES: protein
                     motif:HMM:PF00924.16,HMM:PF12607.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3772 domain-containing protein"
                     /protein_id="HIC65704.1"
                     /translation="MARAFLAVLLTVLILVASPLAAQDVPKPDFGKWEQVAQQAETVV
                     ADGSSNLERLTAIRQQVFDWRRTFQQAQNVNGDRITAVKQQIEALGAPPKDGETEPSD
                     IAARRTELNDELAKLQAPRQKAVEAASRANAIIQSIDTIRDKRKAQELARLSPSPLVP
                     ANWTLAAENAVALFEGLLSEAGPANEAGRTWSDLKPRLPSVAAYLVAALVILIFGRPW
                     VGMLPSRLSARASEYSRAVVVFITSLGQILVPMIGTYLAIGAVKATGLPGPWTLPILE
                     AVPAAAVILFSGGWLSRQLFPQHAIAYDTIKLADRARDTARHMVDFLATVFAVHHVLA
                     AAILPRSGLYSSVTENRDRVPLDLAEGGASVFNFALIVLAGLALFRLGNILRRLTRRP
                     DAGDLVYRYRILSWAGALTRIIVIVAILLGAIGFVNFANLLIWPWSLSLALIGVLIIL
                     QDFIADLFNMLKRGEEGAREGLAPLLIGFGLVILSIPVFLVIWGAKGTDLLEYWTRIE
                     SGFSFGGVTLSPGTVLTFLIVFAIGYFITRAVQGAFRNSILPKTRLDTGGQNAVVSGL
                     GYLGIFLAAVLAITSAGIDLSSLAIVAGALSVGIGFGLQNIVSNFVSGIILLIERPVS
                     VGDWISAGGQQGIVKKISVRATQVETFDKTEVIV"
BASE COUNT          463 a          919 c          905 g          507 t
ORIGIN      
        1 aataccggga tcgggcttgc gctggtgggc gcgtcgatgg gattccgctc ggtcatcgtg
       61 atccccgaga cgcaatccca ggaaaagaag gatatgctgc ggctggccgg cgccatcctg
      121 gtcgaggttc ccgccgcccc ctacaagaat ccgaacaact acgtccgcta ttccggccgc
      181 ctggccgagg cactggccag gacagaagca aacggcgcga tctgggccaa ccagttcgac
      241 aacacggcca accgtcaggc acatctggaa acgaccggcc ccgaaatctg ggaccagact
      301 gacggcaagg tcgatggctt catctgcgcg gtgggctcgg gcgggacgct ggcgggcgtc
      361 gccatggcgc tgcaaccgcg cggcgtccgg atggggctgg ccgatcccga gggggcggcg
      421 ctctattcct tctatacgac cggcgaattc gacagcccgg gcagttccat caccgaaggc
      481 atcggacagg gccgcatcac ccggaatctg gaaggattca cgcccgacta cgcctaccgg
      541 atccccgacg ccgaggcgct gcccgtcgtt ttcgacctgc tgaaagagga aggcctgtgc
      601 cttggcggat cctcggggat caacgtcgcg ggcgcgatcc ggatggcgcg cgaaatgggg
      661 ccggggcaga ccatcgtgac cgtcctttgc gactacggca atcgctatca gaccaagctg
      721 ttcaacccgg aattcctgcg ggcgaaggac ttgccggtgc ccgactggct gacccgcgag
      781 gcacccgacc ttccggaagt attcgaaggc tgacattcca tggcacgcgc gtttctggcc
      841 gtcctgctga cggtcctcat ccttgttgca tctccgcttg cggcgcagga cgttcccaag
      901 cccgatttcg gcaagtggga acaggttgcc caacaggcgg aaacggtggt cgcggacggc
      961 agcagcaacc ttgaacggct gaccgcgatc cggcaacagg tcttcgactg gcggcggacc
     1021 ttccagcagg cgcagaacgt caacggcgac aggatcacag ccgtcaaaca gcagatcgag
     1081 gctcttggcg ccccgccgaa ggacggcgag accgagccca gcgacatcgc cgcgcgccgg
     1141 acggaactga acgacgagct ggccaagctt caggcgccgc gacagaaggc ggtcgaggcc
     1201 gccagccgcg cgaacgccat catccagagc atcgacacca tccgcgacaa gaggaaggcg
     1261 caggaactgg caagattgtc accctcgccg cttgtccccg cgaactggac gctggccgca
     1321 gagaacgccg tggcattgtt cgaaggattg ctgagcgagg ccggaccggc gaacgaggcg
     1381 ggccgcacct ggtccgacct caagccacgc ctgcccagtg tcgcggccta tctggtcgcg
     1441 gcgctggtga tcctgatctt cggtcggcca tgggtcggga tgctgccctc gcgcctgtcg
     1501 gcgcgcgcgt cggaatattc gcgggcggtg gtggtcttca tcacctcgct gggacagatc
     1561 ctggtgccga tgatcggcac ctatctggcc atcggcgcgg tcaaggcgac cggtctgccc
     1621 ggcccgtgga ccctgcccat cctcgaggcc gttccggcgg cggcggtgat cctgttcagc
     1681 ggcggctggc tgtcgcggca attgtttccg cagcatgcca tcgcctatga cacgatcaag
     1741 cttgccgacc gcgcccgcga cacagcccgc cacatggtcg atttcctggc taccgtcttc
     1801 gcggtccacc acgtccttgc cgccgcgatc ctgccgcgct cgggccttta cagctcggtc
     1861 acggaaaatc gcgaccgggt tcccctggac cttgccgagg gcggggcctc ggtcttcaac
     1921 ttcgcgctga tcgtcctggc gggcctggcc ctgttccggc tgggcaacat cctgcgccgc
     1981 ctgacccggc ggccggatgc gggcgatctg gtctatcgct accggatcct gtcctgggcc
     2041 ggggcgctga cgcgcatcat cgtgatcgtc gcgatccttc tgggcgcgat cggcttcgtg
     2101 aattttgcca atctgctgat ctggccctgg tcgctgagcc tggcgctgat tggcgtgctg
     2161 atcatccttc aggacttcat cgccgacctg ttcaacatgt tgaagcgcgg cgaagagggc
     2221 gcgcgcgaag ggctggcgcc gctgctgatc ggctttggcc tggtcatcct gtcgatcccg
     2281 gtcttcctgg tgatctgggg ggccaagggc accgaccttc ttgaatactg gacccggatc
     2341 gaaagcggct tcagcttcgg cggcgtcacc ctgtcgcccg gcaccgtcct gaccttcctt
     2401 atcgtcttcg ccatcggcta tttcatcacc cgcgcggtgc agggcgcgtt ccgcaactcg
     2461 atccttccca agaccaggct ggatacaggc gggcagaacg cggtcgtctc cggtcttggt
     2521 tatctgggga tcttcctggc cgctgtgctg gcgatcacct cggcggggat cgacctgtca
     2581 tcgctggcca tcgtcgcagg tgcgctgtcg gtcgggatcg gtttcggcct tcagaacatc
     2641 gtgtcgaatt tcgtctcggg catcattctg ctgatcgagc gcccggtcag tgtcggcgac
     2701 tggatcagcg ccggcgggca gcaggggatc gtcaagaaga tctcggtccg ggcgacccag
     2761 gtcgaaacct tcgacaagac cgaggtgatc gttc
//
LOCUS       DTVW01000517            1074 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1622163, whole
            genome shotgun sequence.
ACCESSION   DTVW01000517 DTVW01000000
VERSION     DTVW01000517.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1074)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1074)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1074
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1622163"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>1074
                     /locus_tag="EYO87_06880"
     CDS             <1..>1074
                     /locus_tag="EYO87_06880"
                     /inference="COORDINATES: protein motif:HMM:PF13332.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65705.1"
                     /translation="HSESHKIDTFALSVGAFENISGPVKSLADAPRMAASGKGNLGYQ
                     ALSAVSAGLKAVDALNQLNAIRQGGTIAGVRIGIGISREESSSSEVSAIARTATLSAG
                     NDMSLEAGRDITAKGARIDAGNDIAMAAGRDVILESAQNHLAYEGESSSMSAGIGLTL
                     GVGASGKNGAPGASLSLGLDVSGQQSSYSQSQTYHTNTDVTAGGNVSVATGRDLALKG
                     ARIEADSADLDIGRNLTIESRLDTAEGSNQSSGYSAGVSVGIGLGTDSAGPTFGASAS
                     VNGAKGSNSSAWVNAPSGIVTDNALNANVGETTSITGGVIASRSGDLTLETERLETAD
                     IDLHRKGRQVSGSVGVSIGSNPEG"
BASE COUNT          203 a          360 c          351 g          160 t
ORIGIN      
        1 cattcggaaa gccacaagat cgacaccttc gcgctgtcgg tcggcgcctt cgaaaacatc
       61 tccggtccgg tgaaatcgct ggcggatgcg ccgcgcatgg cagcctcggg caagggcaat
      121 ctcggctatc aggcgctttc cgcggtctcc gccgggctga aggcggtcga cgcgctcaac
      181 cagctcaacg ccatccgcca gggcggcacc attgccgggg tgcgcatcgg cattggcatc
      241 tcccgcgagg aaagcagctc gtcggaggtt agcgccatcg cccgcaccgc cacgctgtcg
      301 gcgggcaacg acatgtcgct ggaggcggga cgcgacatca ccgccaaggg cgcgcggatc
      361 gacgccggca acgacattgc catggcggcg ggacgggatg tcatcctgga atcggcgcaa
      421 aaccatctcg cctatgaggg cgaaagctcc agcatgtccg cgggcatcgg gctgacactt
      481 ggtgtcggcg ccagtggcaa gaatggcgcc cccggcgcca gcctcagcct ggggctggat
      541 gtctccggcc agcagagttc ctatagccag tcgcagacct atcacaccaa cacggatgtg
      601 acggcgggcg gcaatgtgtc ggtcgcaacc ggccgggacc ttgccctgaa gggcgcgcga
      661 attgaagccg atagtgccga tctcgacatc ggccgcaacc tcacgatcga aagccggctg
      721 gacacggccg aaggctccaa ccagagcagc ggctacagcg ccggggtttc cgttggcatc
      781 gggctgggga cagatagcgc cgggcccacc ttcggcgcct ctgccagcgt caacggggcc
      841 aaggggtcca acagctcggc ctgggtgaac gccccctccg gcatcgtcac cgacaacgcg
      901 ctcaatgcca atgtcggcga aacgacctcc atcaccggcg gggtgatcgc ctcgcgctcc
      961 ggcgacctga cccttgaaac agagcgtctg gaaacggcgg atatcgacct tcaccgcaag
     1021 ggccggcagg tttccggttc ggtcggcgtc agcatcggtt ccaatccgga aggc
//
LOCUS       DTVW01000518            1944 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1624662, whole
            genome shotgun sequence.
ACCESSION   DTVW01000518 DTVW01000000
VERSION     DTVW01000518.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1944)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1944)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1944
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1624662"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..863)
                     /locus_tag="EYO87_06885"
     CDS             complement(<1..863)
                     /locus_tag="EYO87_06885"
                     /inference="COORDINATES: protein motif:HMM:PF13584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65706.1"
                     /translation="MVTRLFLVLLLAMASAARAEQPMARLMLLYDRGNPVVAEMIALT
                     VRGEYDLTVSLEQMQFPDSREYDWIQTARDDWRKERVNGKLLQIFERRIAVFPRRDGP
                     VRIGPVTHRLTYVTADGQRATRDVTAPPVKIGVKPFPGGYRPLAASQLTLTDDLSAQP
                     GQLRKDQVLTRRVTIEALGAMAHDLPPRPDLSEPWLISFTRPEIRETVLTEKGPVARV
                     VWEWELRPTTGEPAILRAAAFPWFDTDSRRIEVAAMKPIPFGFAGFGANSGSADKAAA
                     RQDAAAVMLVGA"
     gene            complement(857..1477)
                     /locus_tag="EYO87_06890"
     CDS             complement(857..1477)
                     /locus_tag="EYO87_06890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011747458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65707.1"
                     /translation="MRPAALLVLAAGLAALAVAGPSALGRLALRAGWDGAAVRLLDDP
                     AARGVALFRLGDYKAADEAFAAAGRGQTYNRGLSLAATREYALSVAYFDATLFANPTD
                     DQARSNRDLVAALAPVVVGESTAPGRIKGAGGAPAGDRPITDLLANLSGPEWQRRLDA
                     KGLAATDEWLDTIADDPGAFLKLRIRAEFDRRARMGLIRPVEGDPW"
BASE COUNT          316 a          723 c          644 g          261 t
ORIGIN      
        1 gcccccacca gcatgaccgc ggccgcgtcc tgccgtgccg ccgccttgtc cgcggatccg
       61 gaattcgcgc cgaacccggc aaaaccgaaa ggaatgggtt tcattgccgc gacctcgatc
      121 cgacggctgt cggtgtcgaa ccacggaaat gccgcggcgc gcaggatcgc gggctcgccg
      181 gtggtcgggc gcagttccca ttcccagacg acgcgggcca ccggaccctt ttccgtcagg
      241 accgtctcgc ggatttcggg ccgggtaaag ctgatcagcc acggctcgct gaggtcggga
      301 cgcggcggca ggtcatgggc catcgcgcca agcgcctcga tggtgacgcg gcgggtcaga
      361 acctgatcct tgcgcaattg ccccggctgg gccgacaggt cgtcggtcag cgtcaactgg
      421 ctggccgcca gcggacgata gccgccggga aacggcttga cgccgatctt gacgggcggc
      481 gcggtcacgt cccgcgtggc gcgctggccg tccgcagtga cataggtcag ccgatgtgtc
      541 accgggccga tcctgaccgg cccgtcacgg cgcggaaaca ccgcgatcct gcgttcgaag
      601 atttgcagaa gcttgccgtt gacccgctct ttccgccaat cgtcgcgagc ggtctgaatc
      661 cagtcgtact cgcgcgaatc gggaaactgc atctgctcca gcgacacggt caggtcatat
      721 tcgccgcgca ccgtcagcgc gatcatctcg gcgacgacgg gattgccgcg atcatagagc
      781 agcatcagcc gcgccatcgg ctgttccgca cgcgccgccg aagccatcgc cagcagcagg
      841 acaaggaaaa ggcgcgtcac catggatcgc cctctaccgg ccggatcaga cccatccggg
      901 cgcggcggtc gaattcggcc cggatgcgca gcttcaggaa cgcgcccgga tcgtcggcga
      961 tcgtgtccag ccactcatcc gtcgcggcca ggcccttggc gtcaagcctg cgctgccatt
     1021 ccgggccgga caggttggcc agcagatcgg tgatcggcct gtccccggcg ggtgcgccgc
     1081 ccgcgccctt gatgcggccc ggcgccgtgc tttcgcccac caccacgggc gccagcgccg
     1141 ccaccaggtc acgattggaa cgggcctgat cgtcggtcgg attggcaaac agcgtcgcgt
     1201 cgaaataggc aaccgacagc gcgtattccc gggtcgcggc caggctgagg ccgcgattat
     1261 aggtctggcc gcgtcccgcc gccgcgaaag cctcgtcggc ggccttgtag tcgcccagcc
     1321 ggaacagggc gacgccgcgc gccgccggat cgtccagcaa ccgcaccgcc gcgccgtccc
     1381 agcctgcgcg cagggccagc cgcccaagcg ccgacggccc cgcaaccgcc agcgcggcca
     1441 gaccggccgc aaggaccagc agggccgccg gcctcaccgc tgcctccgca gcatcagcaa
     1501 cagcggcaga cctgcaaggg cggccagaaa cggaccaaga tcgcgatatt gcagcgatcg
     1561 cagcaccgga tcgcgccgaa gcgcaccgcc acggcgcaac cgagccgcca gacccggcag
     1621 attcgccagc gtcgcgacgg cgccgccccg gaccagctcg gccagagcat cgggcggcgg
     1681 gaccgatgcg ccccgggcca gcccctcgac gcgcagggcc gagatgcgca cgccccggtc
     1741 ggccagtcgg tcggcctcgg ccgtggcggc ggcgtcgatg ccgccgccgt ccgaaatcag
     1801 gatcagatcg gcacgctgca atccctccag catctgcccc gcccgtgcca gcgcggcggc
     1861 ggcgcgcgtg ccctgtcccg gcatggtctc tgaatccagc accccgatct gcgtccgcag
     1921 gctggcgata tccagcgtcg gagc
//
LOCUS       DTVW01000519            1414 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1627390, whole
            genome shotgun sequence.
ACCESSION   DTVW01000519 DTVW01000000
VERSION     DTVW01000519.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1414)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1414)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1414
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1627390"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            1..196
                     /locus_tag="EYO87_06895"
                     /pseudo
     CDS             1..196
                     /locus_tag="EYO87_06895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004513521.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="sigma-54-dependent Fis family transcriptional
                     regulator"
     gene            complement(390..1229)
                     /locus_tag="EYO87_06900"
     CDS             complement(390..1229)
                     /locus_tag="EYO87_06900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005613188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HIC65708.1"
                     /translation="MKEFWKRFRSNRGAVIGLVILAVVIATAVTAPFLFPTSPWKMVQ
                     RPFLPPFTQDGLPLGTDAVGRNVLAGLAHGAYVSLLVGLVSTIVALAIGVPVGALAGY
                     FVGRTDDVLMRFTEFFQTIPSFALAIVLLAIFQPSLTFVIIAIAIVSWPPVARLVRGE
                     VLSLRTREFVEAATLSGLGNTQIILRHILPNALPPIIVLASLMVAQAILLESSLSFLG
                     LGDPNIMSWGYMIGAARTVIRTAWWLSFLPGMAILLTVLALNLIGEGLNDALNPRLTR
                     KSE"
     gene            complement(1226..>1414)
                     /locus_tag="EYO87_06905"
     CDS             complement(1226..>1414)
                     /locus_tag="EYO87_06905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009178428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HIC65709.1"
                     /translation="SVAIEVVFAWPGIGRLMFEAINQRDYAVILGVFYISGAMVLLFN
                     LITDVVYVIVDPRIKLTR"
BASE COUNT          310 a          425 c          442 g          237 t
ORIGIN      
        1 caaggccttc gtcgaaatca attgcgctgc cattccaggc gaactcatcg agagcgagtt
       61 gttcggacac gttaagggcg ccttcacagg ggccgtttcc gacaagcaag gcaagcttga
      121 ccttgctgac ggcggcacgt tatttctgga cgagatcggt gacatgagct tgcgtaccca
      181 atcgaaggta ttacgtgata atagtagcaa attcatttgg taacaaataa attgtgacgt
      241 tacctttcgt caacaagcca ttgtgccgct ttcgcccacg atgcacagga tttcaccggc
      301 ggccaggtcg aagctgatgt ccttcgcggc gtaggcgcgg tcggcgccct cgggcaaggc
      361 gatgtcgagg tcgcggatgc tcagcaggct cattccgatt tccttgtcag acgcggattg
      421 agggcgtcgt tcaatccctc gccgatcagg ttcagcgcca gcacggtcag caggatcgcc
      481 atgccgggca gaaaggacag ccaccaggcg gtgcggatca cggtgcgtgc ggcgccgatc
      541 atgtagcccc aggacatgat gttgggatcg cccagcccca gaaaggacag cgaactttcc
      601 agcaggatgg cctgcgccac catcagcgag gccagcacga tgatcggcgg cagcgcgttg
      661 ggcaggatat ggcgcaggat gatctgcgtg ttgcccagcc ccgacagggt cgccgcctcg
      721 acgaattcgc gcgtgcgcag gctcagcacc tcgccccgca ccagtcgtgc caccggcggc
      781 catgagacga tggcgatggc gatgatcacg aaggtcaggc tgggctgaaa gatcgccagc
      841 agcacgatgg ccagcgcaaa gctggggatg gtctggaaga attcggtaaa gcgcatcagc
      901 acgtcatcgg tccggccgac aaagtaaccc gccagcgcgc ccacgggcac cccgatggcc
      961 agcgccacga tggtagagac gagaccgacc agaaggctga cataggcgcc atgcgccagt
     1021 cccgccagca cattgcgccc cacggcgtcg gtgcccagcg gcaggccgtc ctgcgtgaag
     1081 gggggcaaaa acgggcgctg caccattttc cacgggctgg tgggaaacag gaagggcgcg
     1141 gtcacggcgg tggcgatcac cacggccagg atgaccagcc cgatcactgc gccccggttg
     1201 gagcggaagc gtttccagaa ctctttcatc ttgtcagctt tatgcgcggg tcaacgatga
     1261 catagacgac atcggtgatc agattgaaca acagcaccat cgcgcccgaa atgtagaaca
     1321 cgcccaggat caccgcatag tcgcgctggt tgatggcctc gaacatcagc cggccgatgc
     1381 cgggccaggc gaagaccacc tcaatggcca ccga
//
LOCUS       DTVW01000520            2455 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1629185, whole
            genome shotgun sequence.
ACCESSION   DTVW01000520 DTVW01000000
VERSION     DTVW01000520.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2455)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2455)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2455
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1629185"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(60..1103)
                     /locus_tag="EYO87_06910"
     CDS             complement(60..1103)
                     /locus_tag="EYO87_06910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015588460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HIC65710.1"
                     /translation="MASIGVDLHSNSFTICRLAPGVDESFETYQLSEADIDRFCQSVD
                     AEDEIAVEATGNTAWFCDEIRGCVGRIVVVNPRKFQVIRKSVSKTDRNDARALAFFLS
                     RDMLPETRLRSPAEAELGSLVLTRDLLVKQRTMLINKIHALHVRHGWKLKKEGLASRK
                     RLREMDLSRFTRLEQVELGALRDQALSLSETLAQLDREVEAAASALRGFEGISSIKGI
                     GARSAAILLAGIGNVDDFESADKLAAYFGIVPRVSQSNDTDNRGRITKRGDKLVRTTL
                     VQCTLIAKRYSGYLNSFYQRIKARRGSGKAIIATARKLLTIIYDTLKNGWVFEDFPQF
                     KIKENQCPAGQPS"
     gene            complement(1400..1813)
                     /locus_tag="EYO87_06915"
     CDS             complement(1400..1813)
                     /locus_tag="EYO87_06915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009504577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PaaI family thioesterase"
                     /protein_id="HIC65711.1"
                     /translation="MSAQDGRPDIPAPFNALLGVRFVSWSDGKAELRLAIGRDHLNGA
                     FSVHGGVYATMLDNAVTFCAAYAGDGRPGHRCLTLSLTTSFVAPATEGDTLTARARIV
                     GGGRKLVFVQGEIFNQDGHHLAHGDAVIKRLAPPS"
     gene            complement(1815..>2455)
                     /locus_tag="EYO87_06920"
     CDS             complement(1815..>2455)
                     /locus_tag="EYO87_06920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009803556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HIC65712.1"
                     /translation="SNDLLFIAGGNIFLLLLLGALTSFILGMGMTVTAAYVILAVSLA
                     PALVAGGLDPIGVHLFILYWSMLSYITPPVALAAFAAAAIAQAKPFATAFEAMKLGSI
                     VYIIPFFFVLDPAFILQAGPLESLLTVLRAGLGILLICAGIQGYLFGVGRIETGLPGT
                     IARVLLGIAGLAFAFPSNAGLAVPILGAVGAGAAMAAVAVALVMVSAKQETA"
BASE COUNT          522 a          741 c          713 g          479 t
ORIGIN      
        1 ggatatgtct tcgataccgg tatttgatct ggtgacgccg ggtatcattt atgaggctcc
       61 tatgatggtt gtccagcagg acattgattt tctttgattt tgaactgcgg aaaatcttcg
      121 aagacccaac cgttcttgag tgtgtcatag atgatcgtca gcagctttcg cgcggtggcg
      181 atgatggcct tgcccgaccc acgccgtgcc ttgatgcgtt ggtagaagct gttcaggtag
      241 ccggaatagc gcttggcgat cagggtgcac tggaccagcg tggtgcgcac gagcttgtcg
      301 ccgcgcttgg tgatccggcc ccggttatcg gtatcgtttg actggctcac gcgtgggacg
      361 atcccgaaat aggcggccag tttgtcggcg ctctcgaagt cgtcgacatt gccgatgccg
      421 gccagcagga tcgcggccga gcgcgccccg atccccttga ttgaggatat tccctcaaac
      481 cctctcagcg cactggccgc cgcttctact tcccggtcaa gctgcgccag agtttccgac
      541 aggctcagag cctggtccct cagcgcaccc agttctacct gctcaagccg tgtgaaacgg
      601 ctcaggtcca tctcccgcag acgcttgcgg ctggccagtc cttctttctt cagcttccag
      661 ccatgtcgca catgcagcgc gtggatcttg ttgatcagca tcgtgcgctg cttgaccagc
      721 aggtcgcggg taagcaccag cgatccgagt tcggcctcag ccggcgatct gagccgcgtt
      781 tccggcagca tgtccctgga cagaaagaac gccagcgccc gggcatcatt gcggtcggtc
      841 ttgctcaccg acttgcggat cacctggaac ttgcgcggat tgaccaccac gatacggccc
      901 acacaaccgc ggatttcatc gcaaaaccag gccgtgttgc ccgttgcttc aacggcaatc
      961 tcatcttctg catcaacgct ttgacagaag cggtcaatat ccgcctccga aagctgatat
     1021 gtctcgaagc tctcgtcgac gccaggcgca agccgacaga ttgtgaagga atttgaatga
     1081 agatcgacac cgatagaggc catgattata ctcccaaagt taggaggcgg agcctcgaca
     1141 gaggcgtgaa cggccaaacc aagctcctat ccaagatcac cgggcatgcc cgggccttat
     1201 gggggctgtt cggaaacagg tgaaagctga gctcctttac agggtcgcta tgccctagac
     1261 gcaaatccag cctgaaacct atccgcctcc ccaaattcct aacaaaactc agggcgtttg
     1321 gtcgttcaca acacattcat accccctcct tttgtccttc gtttgtttgg tctcgctcac
     1381 catcggttca ctcaggtggt cacgacggtg gtgcgagccg cttgatcacg gcatcgccat
     1441 gggccagatg gtgcccgtcc tgattgaaga tctcgccctg tacaaaaacc agtttgcgtc
     1501 cgcccccgac aatgcgcgcg cgggccgtca gcgtgtctcc ttcggtcgcc ggggcgacga
     1561 aactggtggt aagcgaaagc gtaaggcagc gatgacctgg gcggccatcc cccgcgtagg
     1621 ccgcgcaaaa ggtgaccgcg ttgtccagca tggtcgcgta gacaccgcca tgcaccgaaa
     1681 aagcgccgtt caggtgatcg cgtccgatgg ccaaccgcag ctcggctttg ccatcggacc
     1741 acgagacgaa gcgcacgccg agcaatgcgt tgaacggggc ggggatgtcc ggtctgccgt
     1801 cttgtgcgct catattacgc tgtctcctgc ttggccgaga ccatcaccaa agcgacagcc
     1861 actgccgcca tagcggcacc tgcgcccacc gcgccgagga tcggaaccgc cagacccgcg
     1921 ttcgagggaa aggcgaaggc cagaccggca ataccaagaa ggacgcgggc gattgttcct
     1981 ggcagtccgg tttcgatccg cccgacgcca aacagatacc cctgaatacc ggcgcagatc
     2041 agcagaatgc cgagaccggc gcgcagaacc gtaagcaggc tttcgagtgg accggcttgc
     2101 aggatgaacg ccggatcaag gacgaagaag aagggaatta tatagacgat gcttccaagc
     2161 ttcatcgctt cgaaggccgt cgcaaagggt ttggcctggg cgatggccgc cgcggcgaaa
     2221 gccgcgagcg cgacgggggg ggtgatatag ctcagcatgc tccagtaaag gataaataaa
     2281 tggacgccga tcggatcgag cccgccggcg accagggcgg gtgccagcga caccgccaga
     2341 atcacatagg cggcggtcac ggtcatgccc attccaagaa tgaaactggt caaagccccc
     2401 agcagcagaa gcagaaagat gttgccgccc gcgatgaaca gcagatcgtt cgaga
//
LOCUS       DTVW01000521            1034 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1630043, whole
            genome shotgun sequence.
ACCESSION   DTVW01000521 DTVW01000000
VERSION     DTVW01000521.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1034)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1034)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1034
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1630043"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
BASE COUNT          230 a          366 c          333 g          105 t
ORIGIN      
        1 atgaaggatg gctcgcgagc tctgaagaca ggccgacgaa tgccagcgtg ttaagcgaca
       61 gcgacaggaa aatggcgaag gccagcgggt cgatcccgcc cggaagaagc ggcatctgac
      121 caatgccgac cgagggcagg aagatcagcg ccagccacag gcccgatccc agcccgacac
      181 cggcaaatgc cccgcgccgg ttggcgccac gccacagcag accgcccagc atcgcaggca
      241 gcacctgcgc cattccggta aacgccacca gccccatcga ggccagcgcc accgagccgc
      301 ccgaagcctg gtgatagacc cagcccgcgc ccagcacagc cacgatcgcc aagcggcggg
      361 cgttcaggat caacccccgc agatcccggt ctgcgtcctc gccgccggga cggcggcgca
      421 gcgccagcca ggcgggcacc agccaatggt tcgaaatcat cgtggccagg gcgatggccg
      481 ataccacgac catcgaggtc gcggccgaaa atccgcccag aaagaccagg aatgccagca
      541 gattctggcc cgcatcggcg ggcagcgtca gaacatagag atcgggattg gcgtccggca
      601 aaagctcttg tcccatcaca gcgatgggca ggacgaagaa ggacatggcg aacagatagg
      661 ccggaaaggc ccagcccgcc acgcgcaggc gatcctcgtc cgaagcctcg accaccatca
      721 cctgaaacat tcgcggcagg gtcaggattg ccgctcccga caccacgatc agcgcggtcc
      781 agcggtcggg gcgcagcagc cagccttcgg ccacggccgg atcgcggccg gcgcgggcga
      841 cgcgatccag catgtcgacg ggcccctcgg ccagccccca gacgacaaag acgcccacgg
      901 cgagaaaggc cagcagcttg accaccgcct ccagcgcgat ggcggtgacc acgccgtggt
      961 ggcgttcgtc ggcggcaagg ttgcgggtgc cgaagatgat ggcaaagagc gcaaggcccg
     1021 ccgcgaccca cagc
//
LOCUS       DTVW01000522            3809 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1631541, whole
            genome shotgun sequence.
ACCESSION   DTVW01000522 DTVW01000000
VERSION     DTVW01000522.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3809)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3809)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3809
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1631541"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..525
                     /locus_tag="EYO87_06925"
     CDS             <1..525
                     /locus_tag="EYO87_06925"
                     /inference="COORDINATES: protein motif:HMM:PF13458.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65713.1"
                     /translation="NSPAVSAELLERGYKWYFSDQITADTEAATVVEFFEHLMTQGDV
                     VPALLYEDSPRGAGTIERIEVLLEERGIEIAASAPYSRSDRNLLPPVKRVQTSSANMV
                     IWAGYTEDVVTKLQAMQQHDFKPYIVGISGGPVDVRTPQLVDRGFVEDVNLSTVDYLN
                     PDMDRAQRFVKAYE"
     gene            538..834
                     /locus_tag="EYO87_06930"
     CDS             538..834
                     /locus_tag="EYO87_06930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65714.1"
                     /translation="MPSSYASMCNRGVYTLKAVLEKTLESGQKLTTENLRAAILKIDI
                     PGDQLISPFSRIKFDEHGRNVGSQNLIAQWKNGGTKKVTIWPPEVAVEEPNPLN"
     gene            861..1547
                     /locus_tag="EYO87_06935"
                     /pseudo
     CDS             861..1547
                     /locus_tag="EYO87_06935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012248579.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
     gene            complement(1622..2776)
                     /locus_tag="EYO87_06940"
     CDS             complement(1622..2776)
                     /locus_tag="EYO87_06940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006223316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
                     /protein_id="HIC65715.1"
                     /translation="MQFELDDWQETARRSFRKYLDAEVAPLVEAHEDAHRPPPPEVLQ
                     KMGEFGLLGGLLPEAQGGAGLDYLTYCALLCELSQVWPSLRSIVSTSNLVLMIVAQHG
                     TPEQQARWLGDLVSGRKTAFFALTEPNVGSDASNVETRARRDGDGWRLNGRKLYISNG
                     TGADLGVVFARSGDGERAEVSAFVVEAGTAGFSTREVRSMGMNSCPLGELLFEDVLLP
                     ADHLIGAEGEAFAIAKHYLNVGRCFVSFTCLGLSIAAYEAALRYAGAREQFGRKIGGF
                     QLVQQMIADMLTGVETSRLLACRAADALDRGAPDRGRACSMAKRHNSDTALRVCETAL
                     QVHGGAGYTRDFPVERYYRDVRHLTIAEGTNQLQALLLAQGALGISALRG"
     gene            complement(2783..>3809)
                     /locus_tag="EYO87_06945"
     CDS             complement(2783..>3809)
                     /locus_tag="EYO87_06945"
                     /inference="COORDINATES: protein motif:HMM:PF02515.15"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HIC65716.1"
                     /translation="AEVIKVERPAGDAARAMFPGLFAAVNRGKKSIALNLKDDTDRAA
                     FLRLAKRADVVIEGYRPGVTARLGIDYETLSALNPGLVYCSVSGYGQTGPARDWPGHD
                     LNYAAMAGAVAISGAPDGPPEYTTGVPIGDLSAAMYAIITILAALHGRDATGRGQYLD
                     VAITDALASWVAPRYGVWDAGRQAGREITKADILRRAAYGIFATADGKYITIGAIETH
                     FFRRLIRATGMTGFDDPALDDFAARTDRTDDIRAALTPLIAARPYAHWAEIFEAEDVP
                     FAPVNGLEDLARDPQLKARGMVRSAGAAQVMAFPVPMAGMSDPAGHVPAVGEHQAEIL
                     DQAEKLE"
BASE COUNT          707 a         1265 c         1185 g          652 t
ORIGIN      
        1 aactcgccgg cggtgtcggc cgagctcctc gagcgcggtt acaaatggta tttctccgat
       61 cagatcacag ccgataccga ggcggccacg gtcgtggaat tcttcgaaca cctgatgacg
      121 caaggcgacg tcgtcccggc gttgctttat gaagacagcc cgcgcggcgc cggaaccatc
      181 gagcggatcg aagttctgct ggaggagcgg ggcatcgaga tcgccgccag cgcgccgtat
      241 tcgcgcagcg atcgcaacct tctgccgccg gtcaagcggg tgcagacatc gagtgccaac
      301 atggtgatct gggccggcta caccgaagat gtggtgacca agctccaggc aatgcagcag
      361 catgacttca agccctacat tgtcggaatc agtggcggtc cggttgatgt gcgcaccccg
      421 caactggtgg acaggggctt cgtcgaggac gtcaatctca gcacggtgga ctacttaaat
      481 cccgacatgg accgcgccca gcgttttgtg aaggcttacg agtaacggca cggcatcgtg
      541 ccgtcaagct atgcgtcgat gtgcaaccgc ggtgtctaca cgctgaaggc cgtgctggag
      601 aagacgcttg agtccggcca gaaactgacg accgagaacc ttcgcgccgc catccttaag
      661 atcgacatcc ccggcgatca gctgatctcg ccgttctcgc ggatcaaatt cgacgaacac
      721 ggcaggaacg tcggatcgca gaacctgatc gcgcaatgga agaacggcgg cacgaaaaag
      781 gtcacgatct ggccgccaga ggtggctgtg gaagagccca atcctctgaa ctgatgcgaa
      841 aactataacc ggggcccaag atgaagctgt cgatcgagtc tctcgtctcc ggttacggtc
      901 tgctcgacgc gctccacggc gtcagcatcg agatcggccg agggcgaggt cgtggctgtg
      961 atcggaccga acggcgcggg caaatccacc cttctgcgca cgatttcggg ccttgtggcc
     1021 gcccgttcca gagcgatccg ccacgatggc aaggaaatcg gcggttttgc cgccagcgag
     1081 attccgcgcc tcggcctcgt ccatgttcct gaggcgcggc acgtcttcgg gtcactcacg
     1141 gtcgagcaaa atctgatcgt gggtgcgagc gccgcactcg acgcgaaaga ccgaaaggac
     1201 gccctttccg atgctgagcc agaaggcccg cgaacttgcc ggagggctct caggcggtca
     1261 gcagcagatg ctggcgatcg ggcgcgctta tggcccggcc cagcatgatc atgctcgacg
     1321 agccgtcgct cggccccgcg cctctgatgg tcgagcagat gtacgaggcc ctcgacggtc
     1381 ggcgccgcac cggcctgagc attcttctgg tggaacagga tgtctacatg gcgctggatt
     1441 tcgccagccg cgcctatgtt ctggaaaacg ggacaatcgc cctcgccgca gcctctgacg
     1501 tcttgcgcca cgacgatcac gtgcgccgtt cgtatttggg aatctgaccc gccctgtgcc
     1561 cgcattccgc ctgccattca gaccggcagc ggcgacagac cgtgcgcaaa ctgcggaccg
     1621 atcagccccg tagcgccgag atgcccaggg ccccctgtgc cagaagcagc gcctgaagct
     1681 ggttggtgcc ttcagcgatc gtgagatgtc gcacatcgcg ataatagcgc tcgacgggga
     1741 aatcacgggt gtatccggcc ccgccgtgca cttgcagggc agtctcgcaa acccgcagag
     1801 ccgtatcgga gttgtgacgc ttggccatgg aacaggcccg gccgcgatcc ggtgccccgc
     1861 gatccagcgc gtcagcggcc cggcacgcca gcaaccgcga ggtttccacg ccagtcaaca
     1921 tatctgcgat catctgctgg accagttgaa acccgccgat cttgcgtccg aactgttctc
     1981 gcgcgcccgc atatcgcagc gccgcctcat aggcggcaat tgacaggccc aggcaggtga
     2041 aagaaacgaa acagcgcccc acgttcagat aatgcttggc gatggcgaac gcctcgccct
     2101 cggcgccgat caggtggtct gcgggcagca atacgtcctc aaacagcagc tcgcctagcg
     2161 ggcatgaatt catgcccatg ctgcggacct ctcgggttga aaaccctgct gttcccgcct
     2221 cgaccacgaa ggccgatacc tccgcgcgtt cgccgtcgcc cgaccgcgcg aaaaccaccc
     2281 cgagatcggc cccggtcccg ttggagatat acagtttgcg tccgttcagc cgccagccat
     2341 caccgtcgcg ccgggcccgt gtttccacgt tgctggcgtc cgagccgacg ttcggctcgg
     2401 tcagcgcaaa aaaggctgtc ttgcgacccg aaaccagatc gcccagccac cttgcctgtt
     2461 gctccggcgt tccatgctgc gcgacgatca tcaggacaag gttcgacgtg ctgacgatgc
     2521 tgcgcagcga cggccatacc tgagacagct cgcacagcag cgcgcaatat gtcagataat
     2581 caagcccggc accgccttgc gcctctggca aaagaccgcc cagcaggccg aactcgccca
     2641 tcttctgcaa cacttcgggc ggcggcggac ggtgggcatc ctcgtgcgcc tcgaccaggg
     2701 gcgccacctc ggcgtcaagg tatttgcgga agctgcgccg cgccgtttcc tgccagtcgt
     2761 ccagctcaaa ctgcatcggt cctcactcca gcttttcggc ttggtccaga atttcggcct
     2821 gatgctcgcc cactgccggg acgtggcccg ccggatcact catcccagcc atcggcaccg
     2881 ggaaggccat cacctgggcc gcgccggctg agcgcaccat cccgcgcgcc ttgagctgcg
     2941 ggtcccgggc cagatcctcc agcccgttga ccggggcgaa gggaacatcc tcggcctcga
     3001 agatctccgc ccaatgcgca tagggacgcg cggcgatcag cggggtcagg gcggcgcgga
     3061 tatcatccgt gcggtcggtg cgtgcggcga agtcgtcaag cgcaggatcg tcgaagcccg
     3121 tcatcccggt ggcacggatc aggcggcgga agaaatgcgt ctcgatcgcg ccgatggtga
     3181 tgtatttacc gtcggcggtc gcgaagatac cataggcggc gcggcgcagg atatcggcct
     3241 ttgtgatctc gcgcccggcc tggcgtccgg cgtcccacac accgtagcgc ggggcgaccc
     3301 agctggccag cgcgtcggtg atcgccacgt ccagatactg gccccgcccc gtggcgtcgc
     3361 gtccgtgcaa cgcagcaaga atggtgatga tggcatacat ggctgccgag agatccccga
     3421 tcggcacgcc cgtcgtgtat tcaggcggtc cgtcgggcgc gcccgagatc gccaccgcgc
     3481 ccgccatcgc cgcgtagttc agatcatgcc ccggccagtc gcgcgccggc ccggtctgac
     3541 catagccgct gaccgaacag tagacgaggc cgggattgag cgccgaaagc gtctcatagt
     3601 cgatgcccag ccgcgcggtc acgcccgggc gataaccctc gatcacgacg tccgcccgtt
     3661 tggccagccg caggaaagcc gcgcggtctg tgtcatcctt taggttcagg gcgatgcttt
     3721 tcttgccgcg gttcacggcg gcaaagaggc cggggaacat ggcgcgcgcg gcgtcgcccg
     3781 caggacgttc gaccttgatg acctcggcc
//
LOCUS       DTVW01000523            1675 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1631644, whole
            genome shotgun sequence.
ACCESSION   DTVW01000523 DTVW01000000
VERSION     DTVW01000523.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1675)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1675)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1675
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1631644"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..199)
                     /locus_tag="EYO87_06950"
     CDS             complement(<1..199)
                     /locus_tag="EYO87_06950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015431439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65717.1"
                     /translation="MQTEPRKIAIIGGGVGAVTAAYAITQLPDWQDRYQITFYQIGWR
                     LGGKGASGRNAARGQRIEEHGL"
     gene            complement(249..1637)
                     /locus_tag="EYO87_06955"
     CDS             complement(249..1637)
                     /locus_tag="EYO87_06955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65718.1"
                     /translation="MTQAGQTTDDRAAEAISRRIAAYLGAQIEPGFRVIRYPPGYNFN
                     VQYGMPVMWNPHTFGLIDQICKLDGPHSASMTGSSFSAEFAAILASVGYHTSTADIRA
                     QKQAIGDFDRQGDRVVQVFEAEFGPITAAMIQASGAVPRTKPGYVSWYVGAHYPGTPP
                     RFPPVLASFSAAYAAWLSLGETVEKSARQAQAAAALVSAARAHSIHPGAGNGGLPTGP
                     SAWSVAYCGLPTNNQINAGLDNRQSTVSVTIDVEDAGAGMASLSLDRQSLGRVPRTDL
                     RLSVAAAPEDTARPVDPWAAARHVGLEIVYTGITAIRADPVSLSADRQSGWVSLPILQ
                     QIVAKTGKDVTGLQLQGSAFSIDALFGPGGSFARVQTFVIAQQPTVKMTFRGTNLDEL
                     AGQVTTDQAAQLSLGKIVSLGVDGRDYRVLDMQSTGTELTVTLGAAPPSGTVPLIDQT
                     AHVIGGVIQFPA"
BASE COUNT          275 a          572 c          542 g          286 t
ORIGIN      
        1 gcaggccgtg ttcctcgatc cgctgccccc tggcggcatt gcgcccgctg gcccccttgc
       61 cgcccagccg ccagccaatc tggtagaacg tgatctggta tcggtcctgc cagtcgggca
      121 actgggtgat ggcataggcg gccgtcacgg cgcctacacc cccgccgatg atcgcgatct
      181 tccggggctc ggtctgcatg atctctcctc gccgaaactg tcgtcagccg atgggaacac
      241 gaaaagcgct aggcgggaaa ctgaatcacg ccgccgatga catgcgcggt ctggtcgatc
      301 agcggcacgg taccggatgg cggtgccgcg ccaagggtga cggtcagctc cgtcccggtc
      361 gattgcatgt ccagaacccg gtagtcgcga ccatccaccc ccagcgagac gatctttccc
      421 agactcagct gcgccgcctg gtccgtcgtc acctggccgg ccagctcgtc cagattcgta
      481 ccgcgaaatg tcatcttcac cgtcggttgc tgcgcgatga caaaggtttg gacccgcgcg
      541 aaggatccgc ccggtccgaa cagcgcgtcg atggagaagg cagagccctg aagctgcagg
      601 ccggtcacgt ccttgccggt cttggccacg atctgctgca ggatcggcag gctgacccag
      661 ccgctctggc ggtcggcaga cagggaaacc gggtcggccc ggatcgccgt gatcccggta
      721 tagacgatct ccagcccgac atgacgcgcc gccgcccagg gatcgaccgg gcgcgccgta
      781 tcctcgggcg cggccgccac cgacagtcgc aggtcggtcc ggggaactcg gcccaggctc
      841 tgccggtcaa ggctcaggct ggccatgccc gccccggcat cctcgacgtc gatggtcacg
      901 ctcacggtgc tttgccggtt gtccagaccg gcattgatct ggttgttggt gggcaggccg
      961 caataggcca ccgaccatgc cgacggtccg gtcggcaaac cgccattgcc cgccccggga
     1021 tggatggaat gcgcccgcgc cgcggaaacc agtgccgcgg ccgcctgcgc ctgccgggcg
     1081 gatttttcca ccgtctctcc cagcgacagc cacgccgcat aggccgccga gaacgaggcc
     1141 agaacgggcg gaaaccgggg cggagtgccg ggataatgcg ccccgacata ccaggagaca
     1201 tagcccggtt tcgttcgcgg caccgccccc gaggcctgga tcatcgcggc cgtgatcggt
     1261 ccgaattcgg cctcgaagac ctggaccacc ctgtcgccct gtcggtcgaa atccccgatg
     1321 gcctgcttct gcgcccggat atcggctgtg gatgtatgat atccgaccga agccaggatc
     1381 gcggcgaact cggcgctgaa actgctgccg gtcatgctgg cggaatgggg tccgtccagc
     1441 ttgcagatct ggtctatcag gccgaaggtg tgcggattcc acatcaccgg catgccgtat
     1501 tgcacgttga aattgtagcc cggcgggtag cggatcacgc gaaatcccgg ctcgatctgc
     1561 gcccccagat aggctgcgat cctgcgagag atggcttcgg cggcgcggtc atccgttgtc
     1621 tgcccggcct gtgtcatcgg tcgtccccca tatcgggcgg ggcggccatc gcgga
//
LOCUS       DTVW01000524            1100 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1631793, whole
            genome shotgun sequence.
ACCESSION   DTVW01000524 DTVW01000000
VERSION     DTVW01000524.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1100)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1100)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1100
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1631793"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..348)
                     /locus_tag="EYO87_06960"
     CDS             complement(<1..348)
                     /locus_tag="EYO87_06960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018001440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrite reductase large subunit"
                     /protein_id="HIC65719.1"
                     /translation="MKKKLVVIGAGMASGRLLEHLFETAPDAWQVTLFNGEPRGNYNR
                     LMLSPVLSGDKTYDDIVTHDADWYAAHGVDCRFGQPVVRIDRAARVVHSNQSSAEYDA
                     LVIATGSAPFIIPV"
     gene            complement(363..>1100)
                     /locus_tag="EYO87_06965"
     CDS             complement(363..>1100)
                     /locus_tag="EYO87_06965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011750679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HIC65720.1"
                     /translation="AVGWQATAQIWALALAVTAVLFWILSKDDPVTAARRGSAASRRS
                     LRAEFAPLRNLQVWRFSAYYFFAFGAFVALALWLPHYLIGVYGFDVKVAGMVGAAYSI
                     PASIFRAYGGVLSDRIGARRVLYATFAVSLAATAILSIPAGVTLPVFLVVIFILGFVM
                     SLGKAAVYKHIPSYYPHNVGAVGGLVGMIGGLGGFALPLLFGWLKDQTGLWSSCFMVL
                     FVLVAACALWMHASVRRMGRPAAMQAA"
BASE COUNT          226 a          371 c          359 g          144 t
ORIGIN      
        1 caccgggatg atgaacggcg ccgagcccgt ggcgatcacc agcgcgtcat attcggcgct
       61 gctttggttc gaatggacca cgcgcgcggc gcggtcgatc cgcaccaccg gctggccaaa
      121 gcggcaatcg acgccatggg cggcatacca gtcggcatcg tgggtgacga tgtcgtcata
      181 ggtcttgtcg cccgacagga ccggcgacag catcaaccgg ttgtagttgc cgcgcggctc
      241 gccgttgaac agcgtcacct gccaggcgtc cggggcggtt tcaaacagat gttccagcaa
      301 acggcccgag gccatgccgg cgccgataac gaccagtttc ttcttcatgg cgacagatcc
      361 tttcaggcgg cttgcatggc ggcgggacgg cccatgcgac ggaccgaggc gtgcatccac
      421 agcgcacagg cggcgaccag cacgaacaga accatgaaac agctggacca cagcccggtc
      481 tgatccttca gccagccgaa cagcagcggc agcgcgaagc cgcccaatcc gccgatcatg
      541 ccgaccaggc cgccgacggc gccgacattg tgcggataat agcttgggat atgcttgtag
      601 acggcggctt tccccaggct catcacgaag cccagaatga agatcaccac caggaacacc
      661 ggcagggtga cccccgccgg gatcgacagg atcgcggtcg ccgccagcga caccgcgaag
      721 gtggcataca gcacccggcg cgccccgatc cggtcggaca gcacgccgcc ataggcgcgg
      781 aagatggagg ccgggatcga ataggccgcc ccgaccatgc ccgccacctt cacgtcgaag
      841 ccatagacac cgatcaggta atgcggcagc cacagcgcca gcgcgacgaa cgcgccgaag
      901 gcgaagaagt aataggccga gaagcgccag acctggaggt tcctcagcgg cgcgaattcg
      961 gcgcgcaggc tgcgccggga tgccgcgctg ccgcgccggg cggcggtgac cggatcatcc
     1021 ttgctgagga tccagaacag cacggccgtc acggccagcg cgagggccca gatttgcgcc
     1081 gtggcctgcc agccgacggc
//
LOCUS       DTVW01000525            2448 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1631818, whole
            genome shotgun sequence.
ACCESSION   DTVW01000525 DTVW01000000
VERSION     DTVW01000525.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2448)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2448)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2448
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1631818"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..202
                     /locus_tag="EYO87_06970"
     CDS             <1..202
                     /locus_tag="EYO87_06970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007253906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HIC65721.1"
                     /translation="EWLADRVEIERLGDHYEEKLAQAGFFFPETKAAAMRLNLRNMWS
                     RLVLTRGDVRILHGVLRQLTRR"
     gene            241..1389
                     /locus_tag="EYO87_06975"
     CDS             241..1389
                     /locus_tag="EYO87_06975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_041530605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme A synthase"
                     /protein_id="HIC65722.1"
                     /translation="MAKRPVFEEVSDPGASTRPVTRTGIIDAAPRGARRAIRVWLMVL
                     FVMVAAMIALGGATRLTGSGLSITEWAPVTGALPPMDAARWQSEFQAYQQIPQYREVN
                     PDMDLAGFKRIYWWEWSHRLLGRTVGLIWALGFFGFLLTRRIPAGWTQRLLGIGLLGG
                     LQGAIGWWMVSSGLAEGMVRVASYRLATHLGIAFIILGLIAWYVLMLGRSEADLLRAR
                     RAGERRLFGMATGLMHLAFVQILIGALVAGIDAGRQYTGWPTMGGEWIPSAIWDSSLG
                     WRNLFENPALVQFVHRMTGYLLAIFAVVVWLRARRSPHPVTRGAFTAMIVMVAVQVGL
                     GIMNVINASPLSLALTHQLGAVALFVLIIRARHHARYPHQTSLRGKTR"
     gene            1386..>2448
                     /locus_tag="EYO87_06980"
     CDS             1386..>2448
                     /locus_tag="EYO87_06980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017997833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase M32"
                     /protein_id="HIC65723.1"
                     /translation="MSALDELLSFQRQTEALSSVAERLGWDQETVMPRGAVEQRAEEM
                     AAMESVLHERRTDPRLGEWLDAARPQTGPDIRIVELIGRDYARRIRIPARLATELARV
                     TSLAQGIWAEARANDAPEDFLPTLDQVLLLKREEAAALADGGDLYDALLEDYEPGTTG
                     AEIAGLFDAMRPRLVALREDVLGAERQPQTLQGHFPQETQLRLARTCATAFGYDWTRG
                     RMDMAVHPFSSGRWQDSRITTRVVEPEPFNCIYSTIHEVGHSSYELGIDPDYAFTPLG
                     RGVSMGVHESQSRIYENQMGRGRAFAGWLFNRMSDAFDGLNIQDADAFHATVNKVTPG
                     YIRTESDEIQYNLHIMLRFD"
BASE COUNT          382 a          804 c          835 g          427 t
ORIGIN      
        1 cgagtggctt gcggatcggg tcgagatcga acggctgggc gatcactacg aggaaaagct
       61 ggcccaagcg gggttcttct ttcccgaaac caaggccgcg gcgatgcggc tgaacctgcg
      121 caacatgtgg tcgcggctgg tgctgacgcg cggcgatgtc cgcatcctgc acggcgtcct
      181 gcgccaattg acccgccgct aggcgcgacc taacctccgc cccagttgaa ggagccgatc
      241 atggccaagc gccccgtttt cgaggaagtc tcggacccag gtgccagcac ccgcccggtg
      301 acgcggaccg gcatcatcga cgccgcgccg cgcggcgcgc gccgggcgat ccgggtctgg
      361 ctgatggtgt tgttcgtcat ggtcgccgcg atgatcgcgc ttggcggcgc gacgcggctg
      421 accggatcgg gcctttcgat caccgaatgg gcgcccgtca ccggcgcgct gccgccgatg
      481 gacgcggccc ggtggcaatc cgaattccag gcctaccagc agatcccgca atatcgcgag
      541 gtcaatcccg acatggatct ggctggcttc aagcgaatct attggtggga atggtcccat
      601 cgcctgctgg gccgcaccgt gggactgatc tgggcgctcg gcttcttcgg ctttctgctg
      661 acccgccgca taccggcggg ctggacgcag cgattgctgg gaatcggcct tctgggcggg
      721 cttcaggggg cgatcggctg gtggatggtc agttccggtc tggccgaggg gatggtgcgc
      781 gtggcctctt accggctggc gacgcatctg gggatcgcct tcatcatcct gggtctgatt
      841 gcctggtatg tgctgatgct gggccggtcc gaagcggacc tgctgcgagc aaggcgcgcg
      901 ggcgagcgca ggctgttcgg catggccacc ggcctgatgc atctggcctt cgtgcagatc
      961 ctgatcggcg cgctggtcgc gggcatcgat gcgggccgcc aatataccgg ctggccgacc
     1021 atgggcggcg aatggatccc ctctgcgatc tgggattcct cgctgggttg gcgcaatctg
     1081 ttcgaaaacc cggccctggt gcagttcgtc caccgcatga ccggctatct gctggcgatc
     1141 ttcgcggtgg tggtctggct gcgcgcgcgg cgttcgcccc atccggtgac gcgcggggcc
     1201 tttaccgcga tgatcgtcat ggtggcggtg caggtgggcc tgggcatcat gaacgtgatc
     1261 aacgcctcgc ccctgtcgct ggccctgacc caccagctgg gcgcggtggc gctgttcgtg
     1321 ctgatcatcc gggcccgcca ccacgcccgc tacccgcatc aaacctcgct gagggggaaa
     1381 acccgatgag cgccctggac gaattgctga gctttcagcg tcagaccgaa gccctgtcct
     1441 cggtcgccga gcggctgggc tgggatcagg aaaccgtcat gccgcgcggc gcggtggaac
     1501 agcgggccga ggaaatggcc gcgatggaat cggtgctgca cgaacgccgc accgatccgc
     1561 gccttggcga atggctggac gcggcccgcc cacagaccgg gcccgacatc cgcatcgtcg
     1621 agttgatcgg tcgcgactat gcccgcagga tccgcatccc ggcccgcctc gcgaccgaac
     1681 tggcgcgcgt gacctcgctg gcgcaaggca tctgggccga ggcgcgtgcc aatgacgcgc
     1741 ccgaggactt tctgccgacg ctggatcagg tgctgctgct gaaacgcgag gaggccgcgg
     1801 cgctggccga tggcggcgat ctctatgatg cgctgctgga ggattacgag cccggcacga
     1861 ccggggccga aatcgccggc ctgttcgacg cgatgcggcc gcgcctggtc gcgctgcgcg
     1921 aggatgtgct gggcgccgag cgccagcccc agacgctgca ggggcatttc ccgcaggaaa
     1981 cccagcttcg gctggcccgc acctgcgcga cggccttcgg ctatgactgg acgcgggggc
     2041 ggatggacat ggcggtccat cccttcagca gcggccgctg gcaggacagc cgcatcacca
     2101 cgcgcgtggt cgagcccgag ccgttcaact gcatctattc caccatccac gaggtcggcc
     2161 attccagtta tgagcttggg atcgaccccg actatgcctt cacgccgctg ggacgcggcg
     2221 tctcgatggg ggtccacgaa agccagagcc gcatctacga gaaccagatg gggcgcggcc
     2281 gggcctttgc aggctggctg ttcaaccgca tgtcggatgc cttcgacggg ttgaacatcc
     2341 aggatgccga tgccttccac gcgaccgtca acaaggtcac accgggctat atccgcaccg
     2401 aatccgacga aatccagtat aacctgcaca tcatgctgcg cttcgacc
//
LOCUS       DTVW01000526            1627 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1631925, whole
            genome shotgun sequence.
ACCESSION   DTVW01000526 DTVW01000000
VERSION     DTVW01000526.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1627)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1627)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1627
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1631925"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..513
                     /locus_tag="EYO87_06985"
     CDS             <1..513
                     /locus_tag="EYO87_06985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005861575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HIC65724.1"
                     /translation="PLSRLIDAMMAFPDILLALSLVAIFGGTMVNVILALSVVYAPRI
                     ARIVRASTLVIRELPYVEAARALGTRTPRIMVTHVLRNIMSPILVQATFIFAYAMLAE
                     AGLSFLGVGVDPRIPTWGIMVNEGRRYIDTAFFLILFPGAAIALSVLSLQIVGDGLRD
                     ALDPRLAKET"
     gene            479..>1627
                     /locus_tag="EYO87_06990"
     CDS             479..>1627
                     /locus_tag="EYO87_06990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003574767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase/deacetylase family
                     metallohydrolase"
                     /protein_id="HIC65725.1"
                     /translation="MRWTPDLPRRPDLALKLTNFRATGFDAAPDEIFVGDDGLVASAP
                     VGGAKVLDLKGAWLSPGWCDLHVHVWHGGTDISIRASDAGRPTGVTAMADAGSAGEAS
                     FHGLREYVIEPASETIKAFLNIGSIGLVACNRVPELIDWRSIDIDRTLAVIEANRDVI
                     CGIKVRASGVIVGSWGITPARIAKRVAEMTNLPLMVHVGEPPPLIDEVFAILTPGDIV
                     THCFNGKPAGSIRDTEALFRMAQDLAERGILMDIGHGGASFNFRTARESMADGLRPFS
                     ISTDLHAHSMARPVHDMATTIAKLLAVGLPFDECIRAVTQAPRGFLGLSGRDGLAPGT
                     RADFTVFDLEDSRVDAMDSQGNHMVMERMFEPRMTVLGCDAQPAARRLP"
BASE COUNT          242 a          539 c          548 g          298 t
ORIGIN      
        1 ccgctgtcgc ggctgatcga cgcgatgatg gcctttcccg acatcctgct ggcgctgtcg
       61 ctggtggcga tcttcggcgg cacgatggtc aacgtgatcc tggcgctgtc ggtcgtctat
      121 gcaccgcgca tcgcgcggat cgtgcgtgcc tcgacgctgg tcattcgcga actgccctat
      181 gtcgaggccg cccgcgccct gggcacccgg acgcccagga tcatggtcac gcatgtgctg
      241 cgcaacatca tgtcgcccat cctggtgcag gccaccttca tcttcgccta tgcaatgctg
      301 gccgaggccg ggttgtcctt tctgggcgtc ggcgtcgatc ccaggatccc cacatggggc
      361 atcatggtga acgagggccg ccgctatatc gacactgcct tcttcctgat cctctttccg
      421 ggtgcggcca tcgcgctgtc ggtcctgtcg ttgcagatcg tcggcgacgg cttgcgcgat
      481 gcgctggacc ccagacttgc caaggagacc tgatttggcc ctgaaactga ccaatttccg
      541 cgccaccggc ttcgacgccg ccccggacga gatcttcgtg ggtgatgacg gccttgtcgc
      601 cagtgccccc gtgggcggcg ctaaggtgct ggacctgaag ggcgcctggc tgtcgcccgg
      661 ctggtgcgac ctgcatgtcc atgtgtggca tggcggcacc gatatctcga tccgcgcctc
      721 cgatgccggg cggcccaccg gcgtgacggc gatggccgat gccggttcgg caggcgaggc
      781 cagctttcac gggttgcgcg aatatgtgat cgagccggcc agcgagacga tcaaggcgtt
      841 cctgaacatc ggctcgatcg ggctggtggc ctgcaatcgg gtgcccgagc tgatcgactg
      901 gcggtccatc gacatcgacc ggacgctggc ggtgatcgag gccaatcgcg acgtgatctg
      961 cggcatcaag gtgcgcgcct cgggcgtgat cgtgggaagt tggggcatca cccccgccag
     1021 gatcgccaag cgggtggccg agatgaccaa cctgccgctg atggtccatg tcggcgagcc
     1081 gcccccgctg atcgacgagg tgttcgcgat cctgacgccc ggcgatatcg tgacccattg
     1141 cttcaacggc aagcccgcag gctcgatccg cgacacggag gcgctgttcc ggatggcgca
     1201 ggatctggcc gaacgcggca tcctgatgga tatcgggcat ggcggcgcgt cattcaactt
     1261 caggaccgcg cgggaatcga tggccgacgg gctgcggccg ttctcgatct cgaccgatct
     1321 gcacgcccat tcgatggcca gaccggtcca tgacatggcc acgaccatcg ccaagctgct
     1381 ggcggtgggc ctgcccttcg acgaatgcat ccgggccgtg acccaggccc cgcgcggctt
     1441 cctgggcctg tcggggcgcg acggcctggc gccggggacg cgggccgatt tcaccgtctt
     1501 cgatctggag gacagccggg tcgacgcgat ggacagccag ggcaaccaca tggtgatgga
     1561 acggatgttc gagccgcgca tgaccgtgct gggctgcgac gcgcaacccg ccgcgcgccg
     1621 cctgccg
//
LOCUS       DTVW01000527            1598 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1632242, whole
            genome shotgun sequence.
ACCESSION   DTVW01000527 DTVW01000000
VERSION     DTVW01000527.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1598)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1598)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1598
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1632242"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            2..673
                     /locus_tag="EYO87_06995"
     CDS             2..673
                     /locus_tag="EYO87_06995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008837320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HIC65726.1"
                     /translation="MQISEILIRDIASGRLVDGQKLPPERDFAKAHGTTVGTLRKALL
                     LLERKGLLERRQGSGNYVRAGGAVDSVYSMLRLELVRGGGGLPTADILSADYLPKDAG
                     QPAYGTSDHGTRFRRLRYLDDQIVAIEEIWLDGGAGIVPRDLIQDSLYLTYKRALKLW
                     ISRAEDRVGIGAVPDWSPTAFALPPGTVTAYIERLSWAQRAEAVEFSRTWYDTEKALY
                     VQRLA"
     gene            690..>1598
                     /locus_tag="EYO87_07000"
     CDS             690..>1598
                     /locus_tag="EYO87_07000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019429869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HIC65727.1"
                     /translation="MTTETLVRGQTRTITYGIIGCGMMGQEHLRNIALLDNAAVGAIF
                     EPDALMRVRAAQFAPDARFVDNLDALLDIPEIDCLLIASPNFRHVEQLQAIARRRPLP
                     VLVEKPLFTDPDHAAAVDAFAASYPAPVWVAMEYRYMPPVARLLEEAEAVTGGIKMLT
                     IRENRFPFLDKVGSWNRFNRYTGGTFVEKCCHFFDLMRLALKSDPVRVMAMGGQAANH
                     LDESYSGETPDILDHGYVLVAFENGAKAMLELCMFAEGARYQEEISALGPSGKIEALV
                     PGPNRFWPPHLGAAPVPQVIYSPRNPK"
BASE COUNT          272 a          522 c          516 g          288 t
ORIGIN      
        1 catgcagatc agcgagatcc tgatccggga catcgcctcg gggcggctgg tcgatggtca
       61 gaagctgccg cccgaacgcg atttcgcgaa ggcccatggc accaccgtcg ggacgctgcg
      121 caaggcgctg ctgctgctgg aaaggaaggg ccttctggaa cgccggcagg ggtcggggaa
      181 ctatgtccgt gcgggtggcg cggtcgattc ggtctattcg atgctgcggc tggaactggt
      241 gcgcggcggc ggcgggctgc ccacggcgga tatcctgtcg gccgattatc tgcccaagga
      301 tgccggccag cccgcctatg gcacctcgga tcacggcacc cgctttcgcc gcctgcgcta
      361 tctggatgac cagatcgtcg cgatcgagga aatctggctg gacggcggcg ccggcatcgt
      421 gccgcgggat ctgatccagg attcgcttta cctgacctac aagcgggcgc tgaaactgtg
      481 gatcagccgg gccgaggacc gggtcgggat cggcgcggtc ccggactggt cgcccacggc
      541 ctttgcgctg ccccccggta ccgtgaccgc ctatatcgaa cggctgtcct gggcgcagcg
      601 cgccgaggcg gtcgaatttt cccgcacctg gtacgacacc gaaaaggcgc tttatgtcca
      661 gcgcctcgcc tgacgaaaga gggatcccca tgaccaccga aacgcttgtg cgcggccaga
      721 cccggaccat cacctatggc atcatcggct gcggcatgat gggtcaggaa catctgcgca
      781 acatcgcgct tctggacaat gctgccgtcg gcgcgatctt cgaaccggat gcgctgatgc
      841 gggttcgtgc cgcgcaattc gcccccgatg cgcgtttcgt ggacaatctc gacgcgcttc
      901 tggacatccc cgagatcgac tgcctgctga tcgccagccc caatttccgc cacgtcgaac
      961 aattgcaggc catcgcaagg cggcggccgc tgccggtcct ggtggaaaag ccgcttttca
     1021 ccgatcccga ccacgccgcc gccgtcgatg ccttcgccgc cagctatccg gcgccggtct
     1081 gggtggcgat ggaatatcgc tacatgccgc ccgtcgcccg gctgctggaa gaggccgagg
     1141 ccgtgaccgg aggcatcaag atgctgacca tccgcgagaa ccgttttccc tttctggaca
     1201 aggtcgggtc gtggaaccgc ttcaaccgct ataccggcgg caccttcgtc gagaaatgct
     1261 gtcatttctt cgacctcatg cgactggcgc tgaaatcgga cccggtgcgc gtcatggcca
     1321 tgggcgggca ggcggccaac catctggacg aaagctattc cggtgaaacg cctgatatcc
     1381 tggaccacgg ctatgttctg gtcgccttcg agaacggcgc caaggcgatg ctggaattgt
     1441 gcatgttcgc cgagggcgcg cgctatcagg aggaaatctc ggcacttggc cccagcggca
     1501 agatcgaggc gctggtgccc ggcccgaacc ggttctggcc gccgcatctg ggcgccgcgc
     1561 cggtgccgca ggtcatctat tcgccgcgca atcccaag
//
LOCUS       DTVW01000528            1681 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1633609, whole
            genome shotgun sequence.
ACCESSION   DTVW01000528 DTVW01000000
VERSION     DTVW01000528.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1681)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1681)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1681
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1633609"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..381)
                     /locus_tag="EYO87_07005"
     CDS             complement(<1..381)
                     /locus_tag="EYO87_07005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009506871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1738 domain-containing protein"
                     /protein_id="HIC65728.1"
                     /translation="MSRSSSSAGRADVYNRITTEIIAAIEAGAGDWRAPWFHNGSSIA
                     RPTNVSSGKRYRGINTLALWATGFAAGYGDGIWGTYKQWQDAGAQVRKGERSTTVVLW
                     REIKVSQQADDDDDDDGHRRMFARA"
     gene            complement(433..978)
                     /locus_tag="EYO87_07010"
                     /pseudo
     CDS             complement(433..978)
                     /locus_tag="EYO87_07010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009506870.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="integrase"
     gene            1130..>1681
                     /locus_tag="EYO87_07015"
     CDS             1130..>1681
                     /locus_tag="EYO87_07015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_443789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS21 family transposase"
                     /protein_id="HIC65729.1"
                     /translation="MPRRKQPRRMTVQDIRTILRLTHDQGLSVREVGLRLKLSKTTVA
                     TYLHRAREAGLNCWPLPLGRDDDATLKRVLFQRVGRPPRDLSEPDWPKTAAEMKRKGV
                     TLVLLWEEYRAAHPDGYGYTWFCERYREFENRISPRYRNRHEAGAVMQTDYAGHTIPV
                     IDPGTGAEHRAQIFVAVLGASNYT"
BASE COUNT          299 a          550 c          543 g          289 t
ORIGIN      
        1 tgcgcgggcg aacatccgtc gatgcccgtc atcatcgtca tcgtcgtcgg cctgctggga
       61 aaccttgatc tccctccaca agacgaccgt ggtggagcgt tctcctttac gcacctgcgc
      121 gccagcatcc tgccattgct tgtacgttcc ccagataccg tcgccatatc cggcggcaaa
      181 gcccgtggcc cagagcgcca acgtgtttat gccgcgatag cgcttgccgg atgaaacgtt
      241 ggtcggacgc gctatgctgc tcccgttgtg gaaccagggc gcacgccagt cgccggcgcc
      301 ggcctcgatg gcggcgatga tctcggtggt gatacgatta taaacatcgg cgcgcccggc
      361 cgatgaggaa gatcgggaca tgacaggtct ccaggacggg cggagcaggc ctctcccgct
      421 ctcctcatcc cgtcactcac cccgatccca agcttcctct ccctttaccg ccgcccgaac
      481 gggcggcgtc gcgccctcgg gcgcgatccg ggccagcaca ccctcgatcc ggtcaacctc
      541 ctgctggagc gcggtccgct gcaatccggg caaccgcttc tcgcgcagca acatgcgtgc
      601 ctcatcggca ctccgctccc agacgggcct gtgatgttcc gcgatgcagg cgttcgggca
      661 gcgggtcggt tcacaaagtg ctgtcaatgg gcggtctgcc gcggcatctg tcacgcgctt
      721 gaggcacagg gcggttgccg gatcgaagaa gcaatcggca agcggtccga catgcagggt
      781 gcgggccaga ctggcgagca tggtgcgcag acgagaccgg tcggcgatca tcggcggcaa
      841 tggcccaagc tcggtggctg tctcgtcgag ggtacgcgcg acacgaggac cggccggccc
      901 accaaggtcg gcccagccgc gccgcctgtc gaaatactcg agcagatcat cgatctggcc
      961 gagccgacgt tgcgcctgcg ggtttcgcaa aatcccggac acggatttca gtaattcccg
     1021 gacagggatt tcggtaattc ccggacagct ccgggggtct tgggcacggt tggtcatcgc
     1081 cagcgccgtc acagcattct gccggtcttg agcaagaccg ggaggggaca tgccacgacg
     1141 caagcaaccg aggcgcatga ccgtgcaaga catacgaacc atattgcggc tgacgcatga
     1201 ccaagggctt tcggtgcgcg aggttggtct gcgcctgaag ctcagcaaga cgaccgtggc
     1261 gacctatttg catcgcgccc gggaggcagg tctgaactgc tggccgttgc cattgggccg
     1321 cgatgatgat gcgacgctga agcgggtgct tttccagcgc gtcggccgcc cgccccggga
     1381 cctgagcgaa cccgactggc cgaagacggc ggccgagatg aagcgcaagg gcgtgacgct
     1441 ggtgctgctg tgggaggaat accgcgccgc gcatcctgac ggctacggct acacctggtt
     1501 ctgcgaacgc taccgcgagt tcgagaaccg catcagcccg cgataccgca accgccatga
     1561 ggccggcgcg gtgatgcaga ccgattacgc gggtcacacg atcccggtga tcgacccggg
     1621 caccggtgct gagcatcgcg cgcagatctt cgtcgcggtt ctgggggcgt ccaattacac
     1681 a
//
LOCUS       DTVW01000529            1623 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1635753, whole
            genome shotgun sequence.
ACCESSION   DTVW01000529 DTVW01000000
VERSION     DTVW01000529.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1623)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1623)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1623
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1635753"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..403
                     /locus_tag="EYO87_07020"
     CDS             <1..403
                     /locus_tag="EYO87_07020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008280846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HIC65730.1"
                     /translation="TFILNFIPSVGSIIATVITTLLAFVLTGDISVTGIVALGCTITQ
                     FVIGNVLDPMLLGQTLRLSSFGIILSLAFWGAVWGIPGMFLAVPIMVALMIVCAHIPW
                     LRPVAVLLSREGLPDDGSSDEDDDAPASIAA"
     gene            654..1043
                     /locus_tag="EYO87_07025"
     CDS             654..1043
                     /locus_tag="EYO87_07025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011337056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell wall hydrolase"
                     /protein_id="HIC65731.1"
                     /translation="MYFESNRSSRDGMVAVGSVVMNRVRSDRFPDSVCGVVAQRNQFA
                     PGVMSRKMNDRSVPMVREAARSVLRGERHPLVQNAKFFHTAGYRFPYDNMHYVLVTGG
                     NAFYEKRKNYLVTRPSPPRPIEGLTGR"
     gene            complement(1073..>1623)
                     /locus_tag="EYO87_07030"
     CDS             complement(1073..>1623)
                     /locus_tag="EYO87_07030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011047653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="mechanosensitive ion channel"
                     /protein_id="HIC65732.1"
                     /translation="ATQVETFDKTEVIVPNSDLISQPVTNWTRHNKIGRIIIPVGVAY
                     GSDTRKVEKILQEIVEDHPLVALDPAPAILFRNLGPDSLDFEIRAILADVGTGLGVTS
                     ELLHEVVRRFAEEGIEIPFAQRDIWLRNPEALPGAADTGGPAPSAAPGTAPGAPDPRV
                     GKARTETARDLPGDGDQGDGDR"
BASE COUNT          249 a          531 c          540 g          303 t
ORIGIN      
        1 gaccttcatc ctgaatttca tcccctcggt cggctcgatc atcgcgacag tgatcacaac
       61 gctgctggcc ttcgtcctga ccggcgacat ctcggtgacg gggatcgtcg cgcttggctg
      121 cacgatcacg caattcgtca tcggcaatgt gctggatccg atgcttctgg gccagacgct
      181 gcggctgtcc agctttggca tcattctcag tcttgccttc tggggcgcgg tctggggcat
      241 tccgggcatg ttcctggcgg tgccgatcat ggtggccctg atgatcgtct gtgcccacat
      301 cccctggctg cgcccggtgg ccgtgctgct gtcgcgcgag ggcctgcctg acgatggcag
      361 cagcgacgag gacgacgacg cccccgcctc gatcgccgcc tgagcggcaa acccccgtcg
      421 cttgcgcctg actgttgctg caacaccgcc ggctttgcta tcttccccgc aacaaagacc
      481 gaaagaaccg cgatcagcgg gaaggggaca ggcagatgac agtttcgacc tggacgccaa
      541 gggcggtgcg ccgtctggcc gggatgctga tgttgcttgc gggctgttcg ggcggcgcag
      601 gcggttcgaa cgcggtgctt cgccgctcgg atctcgattg catgatgcgg gcgatgtatt
      661 tcgaatccaa ccgctccagc cgcgatggca tggtggcggt gggcagcgtg gtgatgaacc
      721 gcgtgcgctc ggacaggttt cccgacagcg tctgcggcgt cgtggcgcag aggaaccagt
      781 tcgcgcccgg cgtcatgagc cggaagatga acgatcgctc ggttccgatg gtgcgcgagg
      841 ccgcccggtc cgtccttcgc ggcgaacggc atccgctggt ccagaacgcg aagttctttc
      901 acactgcggg ctaccgcttt ccctacgaca acatgcacta cgttctggtg acgggcggaa
      961 acgccttcta cgaaaaacgc aagaattatc tggtcacgcg cccgtcgcct ccgcggccga
     1021 tcgagggatt gaccgggcgc tgaggccggc ccgcagggcc ggacccgccg gctcagcgat
     1081 cgccgtcgcc ctgatcgcca tcgcccggca aatcgcgcgc ggtctccgtc cttgccttgc
     1141 cgacgcgcgg atcgggggcg ccgggcgccg tgccgggcgc tgccgaaggg gccgggccgc
     1201 cggtatcggc cgcgcccggc agggcctcgg gattgcgcag ccagatgtcg cgctgcgcga
     1261 agggaatctc gatcccttcc tcggcaaagc ggcgcacgac ctcgtgcagc agttccgagg
     1321 tcacgcccag cccggtgccg acatcggcca ggatcgcgcg aatctcgaaa tccagcgaat
     1381 cggggcccag gttgcggaac aggatcgccg gcgccggatc aagggccacc agcgggtgat
     1441 cctcgacgat ctcttgcagg atcttctcga ccttgcgggt gtcgctgcca taggccacgc
     1501 cgaccggaat gatgatgcgg ccgatcttgt tgtggcgggt ccagttcgtc accggctggc
     1561 tgatcaggtc gctgttggga acgatcacct cggtcttgtc gaaggtttcc acctgggtcg
     1621 ccc
//
LOCUS       DTVW01000530            1712 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1637673, whole
            genome shotgun sequence.
ACCESSION   DTVW01000530 DTVW01000000
VERSION     DTVW01000530.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1712)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1712)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1712
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1637673"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..836)
                     /locus_tag="EYO87_07035"
     CDS             complement(<1..836)
                     /locus_tag="EYO87_07035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009803556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HIC65733.1"
                     /translation="MGTLPAFVRWSLVVSALLLTAASVNHLFNLGFFMNVRLLEIHYL
                     YVMLLLTLPLVFLVFPCSKSDPYGSTRWWDYFLALLALITCAFFAYYGRSVVNKGWDF
                     AAPLNAVIASFAFWFLLLVAARRTGGWTLFAVILVFSIYPMIANYAPGPIQGFQRSPV
                     ETAIFHAMSGESVLGIPMRSFVNLVVGFMIFGVAMQHTGAGPFFIDIAFAALGNVRGG
                     PAKVGVLTSGLTGSMSGSVITNVLTTGSITIPAMKKVGFRPTYAAGIEAAASTGAVLM
                     PP"
     gene            complement(947..>1712)
                     /locus_tag="EYO87_07040"
     CDS             complement(947..>1712)
                     /locus_tag="EYO87_07040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009803555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TAXI family TRAP transporter solute-binding
                     subunit"
                     /protein_id="HIC65734.1"
                     /translation="DAGIETITDLKGKRVGRAVSSPAIDVNMEGLLAFADLTWDDVEA
                     VEFSGYVNTLQGILEDRVDAAFALTTTTVNYQIESSPRGLKWLETPADQTEAWERYTS
                     VTPFVTPHMVSVGPGIDPASPLPMAQYPYPILVTNSDQDSTEVRNIVAALDAGFDDYK
                     DAAPGANAYAIDRQILSWVMPWSDGSVAYFKEKGLWTPEAQANQDKLVERQDVLLRAW
                     GTFVGDAPEGEEEFAAAWMKARADALEAAGHEVFFR"
BASE COUNT          355 a          520 c          510 g          327 t
ORIGIN      
        1 atagggggca tcagcaccgc ccccgtcgac gccgccgctt cgatccccgc cgcataagtg
       61 ggcctgaacc ccaccttttt catcgctgga atggtaattg atccggtcgt cagcacattg
      121 gtgatcacgc tgccgctcat cgaaccggtc agcccgctgg tcagaactcc taccttggcc
      181 ggcccgcccc ggacatttcc gagcgcggca aaggcgatgt cgataaaaaa cggacctgcg
      241 ccggtatgtt gcatcgcaac gccgaagatc atgaacccca cgacaagatt gacaaagctg
      301 cgcatcggta tgcccagcac actttcgccg ctcatcgcgt ggaagatcgc cgtttcgacg
      361 ggcgagcgct ggaagccctg gatcgggccg ggcgcatagt tggcgatcat ggggtagatg
      421 gaaaatacca ggattaccgc gaacagcgtc cagccgccgg tgcggcgcgc ggccacgagc
      481 agcaggaacc agaaggcgaa gctggcgatc acggcattaa gaggagcggc gaaatcccac
      541 cctttgttca ccacgctgcg cccgtagtag gcaaagaagg cgcaggtgat cagggccagc
      601 agggccagaa agtaatccca ccatcgcgtc gatccgtaag gatctgactt tgaacaggga
      661 aagacaagga acaccagtgg cagcgtcagc agaagcatca cgtagaggta gtgaatttca
      721 agcaaccgga cgttcatgaa gaagcccaga ttgaacagat ggttgaccga cgccgcggtc
      781 aaaagcagcg ccgagacgac gagcgaccag cgaacaaacg cgggcagggt gcccataccg
      841 gtcggttgcg ccggcgcttc ctgtgtttcc tgtgccatgc ccgtattcca gttttgtgct
      901 gcgttgcttt gtgcaaggcg cctgtggggc gccgcgctgt gtcgcatcag cggaaaaaga
      961 cttcgtggcc ggccgcttcc agtgcgtcgg cacgggcttt catccatgca gcggcaaatt
     1021 cttcttcacc ctctggagcg tccccgacaa atgtgcccca ggcccgcaag agcacatctt
     1081 gccgttccac caatttgtcc tggtttgcct gggcttccgg tgtccacaga cccttttcct
     1141 tgaagtaggc aacgctgcca tcgctccatg gcatcaccca agacaggatc tggcgatcaa
     1201 tcgcatacgc attggcaccg ggggcggcat ccttgtaatc gtcgaaccct gcgtcaagcg
     1261 cggctacgat gttgcgcacc tcggtggaat cctgatcgga gttagtgacc aggatcggat
     1321 aggggtactg cgccatgggc agtggggagg cagggtcgat gcccggcccc acagacacca
     1381 tatgcggtgt cacgaagggc gttacgctgg tgtagcgttc ccatgcttct gtctggtccg
     1441 cgggtgtttc aagccatttc aggccgcgcg ggcttgactc gatctggtag tttacggtgg
     1501 tcgtcgtcag tgcaaaggcg gcatccacac ggtcttcgag aatgccctgg agcgtgttca
     1561 catagcccga gaattccact gcctccacgt cgtcccatgt caggtccgca aaggccagca
     1621 gcccctccat gttgacatcg atcgccggcg aactgacggc gcgaccgacc cgtttgccct
     1681 tgaggtccgt aatcgtctcg atgccggcat cg
//
LOCUS       DTVW01000531            1439 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1637804, whole
            genome shotgun sequence.
ACCESSION   DTVW01000531 DTVW01000000
VERSION     DTVW01000531.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1439)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1439)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1439
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1637804"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..300)
                     /locus_tag="EYO87_07045"
     CDS             complement(<1..300)
                     /locus_tag="EYO87_07045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009803590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HIC65735.1"
                     /translation="MAQPLKDILVLDFSTLLPGPMATLMLSEAGAEVIKFERPGAGED
                     ARHTEPKIDGESIGFAVLNHGKRSVAIDLKSKDAMDVLRPLLEKADVLVEQFRPGV"
     gene            complement(311..1162)
                     /locus_tag="EYO87_07050"
     CDS             complement(311..1162)
                     /locus_tag="EYO87_07050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009504557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-alpha,7-alpha,
                     12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase"
                     /protein_id="HIC65736.1"
                     /translation="MDFEALSNWDFEEIKQTLTERDTILYALGLGFGEDPTDKKELAF
                     VYEDGLKAVPSMAVILGYPGFWLRDPKTGVNWQKVLHGEQWLDIYKPLPTHGRIVGRS
                     QIDFISDKGEGKGAVIYQSREIIDADSGDKLARVAMSAFARGDGGFGGENRPGPTPAV
                     LPDRVPDHICDIETLPRQALIYRLSGDMNPLHADPDVARSVGFDRPILHGLATYGLAA
                     RAILKTLLDYDSARLVGLDVRFSAPVYPGETVRFEIWEEDGEARFRASIPARDVVVLN
                     NGAARFA"
     gene            complement(1192..>1439)
                     /locus_tag="EYO87_07055"
     CDS             complement(1192..>1439)
                     /locus_tag="EYO87_07055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009803592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="thiolase"
                     /protein_id="HIC65737.1"
                     /translation="AFVQGGRIAPGGALPVNTNGGGLSCVHPGMYGIFTVIEAARQIR
                     GDAPGIQLKDIDLALAHGNGGVLSSQVTAILGSQNTL"
BASE COUNT          277 a          474 c          412 g          276 t
ORIGIN      
        1 cacaccgggg cggaactgct ctaccagaac gtcggccttt tcgagcaaag ggcgcagaac
       61 atccattgcg tcttttgact tgaggtcgat ggccaccgat cgcttgccgt ggttcaacac
      121 agcaaatccg atgctctctc cgtcgatctt tggctccgtg tggcgcgcgt cctcgccggc
      181 tccgggccgt tcgaacttga tcacttcggc gccagcctcg gacagcatga gcgtcgccat
      241 cggaccggga agaagtgtgc tgaaatccag caccaggata tccttgagcg gttgagccat
      301 cttcactgcc tcaggcaaag cgcgccgcgc cgttgttcag aacaaccacg tcgcgtgcag
      361 gaatagacgc tcgaaaccgg gcctcgccgt cctcttccca gatttcgaac cgcacggttt
      421 cgccgggata gaccggagcc gagaaccgaa catccagacc gacaagccgg gcagaatcat
      481 agtccagcaa cgtcttgaga atcgcccggg cggccagacc ataggtcgcc aaaccgtgca
      541 ggatcgggcg gtcgaacccg accgaccgcg cgacatcggg gtcggcatgc agcgggttca
      601 tgtcgccgct gagccggtag atcagcgcct ggcgcggaag cgtctcgata tcacatatgt
      661 gatcgggcac ccggtccggc agcaccgccg gcgtcgggcc gggcctgttc tcgccgccga
      721 atccgccgtc gccccgggcg aaggccgaca tcgcgacgcg tgccagcttg tcgccgctgt
      781 ccgcgtcgat gatctcgcgg ctttgataga tcacagcgcc cttgccctcg cccttgtccg
      841 agatgaagtc gatctggctg cggccgacaa tccggccatg tgtcggcagc ggcttgtaga
      901 tgtcgagcca ctgttctccg tgcagcactt tttgccagtt tacgccggtc ttgggatcgc
      961 gcagccagaa gccgggatac cccaaaatga ccgccatcga gggaaccgcc ttcagaccgt
     1021 cctcatagac aaaggccagt tctttcttgt ctgtcggatc ttcgccgaac cccagcccga
     1081 gtgcgtaaag gatggtatcc cgctcggtca gagtctgctt gatctcttcg aaatcccaat
     1141 tcgaaagtgc ttcgaaatcc agtggcatga tctttcctcc cttagttgcc gtcagagcgt
     1201 gttttgcgat ccaagtatgg ccgtgacctg actggacagc acaccgccgt tgccatgcgc
     1261 cagcgccaga tcaatatcct tcaactgaat gcccggcgcg tcgccacgga tctgacgagc
     1321 agcctcgatc actgtgaaga taccgtacat cccggggtgc acacaggaca ggcctccgcc
     1381 attcgtgttc accggcaagg ccccgccagg cgcgatgcgc ccgccctgga caaaggccc
//
LOCUS       DTVW01000532            3005 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1639292, whole
            genome shotgun sequence.
ACCESSION   DTVW01000532 DTVW01000000
VERSION     DTVW01000532.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3005)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3005)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3005
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1639292"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            284..1309
                     /locus_tag="EYO87_07060"
     CDS             284..1309
                     /locus_tag="EYO87_07060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008887563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HIC65738.1"
                     /translation="MTNLTRRTLLAATAVMALAAPALAAEYEFKFQSSDPAGNPNFEL
                     QKTWVEDVAQKSDGRIAIDLLPVDSIVAYNETQDAIATGIIDGHVTDLSYFAGKDPAF
                     GLMGNPVGAWSDPQQMLDFVANGGGKELLNEIENPYGLQFIGATTPGLEAFVSAKPLD
                     GVDDLKGLKMRAPEGLVQEVFAAAGAAPVNLPGSEVFTSLDKNVIDAADYSVFSTNQA
                     QGLNDVAPHPVYPGFHSLPLVEISMNKAKWDELPEDLQQVMTQSVADFAQRQIKALAE
                     ADEKAVAAAKEGGKIMIHDWSDEERAKFRKIAMGEWEKVASQSPAAQKVYDTLTAYLN
                     EKGLVQQ"
     gene            1366..1911
                     /locus_tag="EYO87_07065"
     CDS             1366..1911
                     /locus_tag="EYO87_07065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008548877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease"
                     /protein_id="HIC65739.1"
                     /translation="MTEPEEIVREDHHAIPEAGAFGRWIDRVAILPALGLVASMLILI
                     QEVILRYVFNSPTIWAHETTVFLCATAFVFGGILCASRDRHIRVVLIYDILPPRIRRL
                     FDIVISTVCALSAGAFAWAAWQMVKRAAWRPDGSFRLETSGSAWNPPYPGILKILLMI
                     ALAVMAVQFVILAVNYARARR"
     gene            1911..>3005
                     /locus_tag="EYO87_07070"
     CDS             1911..>3005
                     /locus_tag="EYO87_07070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007254803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HIC65740.1"
                     /translation="MEIFGSLQSMGIEAGTGLLFVMLLALLVTGIPLAFVTLLVTLIF
                     ALGWFGPNVVPLITSRVYSFVSSFVFVSVPMFVLMAAILDRSGIARDLFDAMRLIGGR
                     IRGGVAVQTIFVAVILAAMSGIIGGEIVLLGLIALPQMLRQGYDRRLAIGVVCAGGSL
                     GTMVPPSIVLIIYGLTANVSIGELFTAAFIPGFMLALFYVSYVLARAYLTPGAVPDPV
                     REPVPLAEKLRLLKGLFLPIVVVIMVLGSIYGGIASVTEASAVGVAGVMLSTMLRGEF
                     TWSLLRGAAMQTLQTVGMIVWIGIGASALVGVFNLMGGIKFVSELITGISENPTIIIL
                     FMMAILFVLGMFLDWVGIALLTMPIFVPIIK"
BASE COUNT          489 a          964 c          975 g          577 t
ORIGIN      
        1 cccttgggcg tgcgcatcgc gaccggctgc gggcaaggac cggaccgctg gacatcgtgt
       61 tcctgcacgg cgaccgcgac atcatcgccg cccggatgca ggcgcggcgc gaccattaca
      121 tgccggcaag cctgatcgac agccagttgg ccgccttgca gccacctgat accacgaccg
      181 aaaacgcgat ctggatcgac gtggccaatc cgcccgaccg gatcaccgaa atcgcggtcg
      241 ccgcgctggc ggccgtgacg actgccacag gaggagagaa agaatgacca acctgacccg
      301 ccggacgctt ctggccgcca ccgccgtcat ggccctggcc gcgcccgccc ttgccgccga
      361 atacgaattc aagttccagt cctcggaccc ggccggcaac ccgaatttcg agttgcagaa
      421 gacctgggtc gaggatgtgg cccagaaatc ggatggcagg atcgcgatcg acctgctgcc
      481 ggtcgattcg atcgtcgcct ataacgaaac ccaggacgcc atcgcgaccg ggatcatcga
      541 cggccacgtc accgacctca gctatttcgc cggcaaggac ccggccttcg ggctgatggg
      601 caacccggtc ggcgcatggt ccgatccgca gcagatgctg gatttcgtcg ccaatggcgg
      661 cggcaaggag ttgctgaacg agatcgaaaa cccctatggc ctgcaattca tcggcgccac
      721 cacgcccggc cttgaagcct ttgtcagcgc caagccgctg gacggcgtgg acgacctgaa
      781 gggcctgaag atgcgcgcgc ccgaagggct ggtgcaagag gtctttgccg cggccggggc
      841 ggccccggtg aacctgccgg gctccgaggt ctttacctcg ctggacaaga atgtgatcga
      901 cgccgccgat tattcggtct tttcgaccaa tcaggcgcag gggctgaacg acgtggcgcc
      961 gcatccggtc tatccgggct tccattcgct gcccctggtc gaaatttcga tgaacaaggc
     1021 caagtgggac gaactgcccg aggatcttca gcaggtgatg acgcaatctg tcgcggattt
     1081 tgcgcagcgc cagatcaagg cgctggccga ggcggacgaa aaggccgtcg ccgccgccaa
     1141 ggaaggcggg aagatcatga ttcacgactg gtccgacgag gaacgcgcca agttccgcaa
     1201 gatcgcgatg ggcgagtggg aaaaggtggc ctcgcaatcg cccgccgcgc agaaggtcta
     1261 tgacacgctg accgcctatc tgaacgagaa gggtctggtt cagcaataag cgccagggag
     1321 tgggcggcca tgcgccgccc ggtcccgcag cagcggaggg cgaagatgac cgagccggaa
     1381 gagatcgtcc gagaggacca tcacgcgatt cccgaagcag gcgccttcgg ccgctggatc
     1441 gaccgcgtgg cgatcctgcc cgcgcttggt ctggtcgcct cgatgctgat cctgatccag
     1501 gaggtgatcc tgcgctatgt cttcaattcg ccgaccatct gggcacatga gacgacggtg
     1561 ttcctctgcg ccacggcctt cgtcttcggc ggcatcctct gcgcctctcg cgaccgccat
     1621 atccgcgtcg ttctgatcta cgacatcctg ccgccgcgca tccggcggct gttcgacatc
     1681 gtcatctcga ccgtctgcgc gctgtcggcg ggtgcctttg catgggcggc ctggcagatg
     1741 gtcaagcgcg cggcatggcg gccagatggc agctttcgcc tggaaacctc gggcagcgcg
     1801 tggaacccgc cctatccggg catcctgaag atcctgctga tgatcgcgct ggccgtgatg
     1861 gccgtgcaat tcgtgatcct cgccgtgaat tacgcaaggg cgcgccgctg atggagattt
     1921 tcggttcgct gcaatcgatg ggcatcgagg ccgggacggg cctgctgttc gtgatgctgc
     1981 tggcgcttct ggtgacgggt attccgctgg ccttcgtgac gctgctggtc acgctgatct
     2041 tcgcgcttgg ctggttcggc ccgaacgtcg tgccgctgat caccagccgg gtctattcct
     2101 tcgtctccag cttcgtcttc gtgtcggtgc cgatgttcgt gctgatggcc gcgatcctgg
     2161 accgcagcgg catcgcgcgc gatctgttcg acgcgatgcg cctgatcggg ggccgtatcc
     2221 ggggcggcgt cgcggtgcag acgatcttcg tggccgtcat cctggccgcc atgtccggca
     2281 tcatcggcgg cgagatcgtg cttctgggcc tgatcgctct gccccagatg ctgcgacagg
     2341 gctatgaccg ccgcctggcc atcggcgtgg tctgcgccgg cggcagcctg ggcaccatgg
     2401 ttccgccctc gatcgtgctg atcatctacg ggctgaccgc gaatgtttcg atcggggaat
     2461 tgttcaccgc ggctttcatc cccggcttca tgctggcgct gttctacgtg tcctatgtgc
     2521 tggcccgcgc ctacctgacg ccgggcgccg ttcccgatcc ggtccgcgaa cctgtcccgc
     2581 tggccgaaaa gctgcggctt ctgaaggggc tgttcctgcc catcgtggtg gtgatcatgg
     2641 tgctgggctc gatctatggc ggcatcgcct cggtcaccga ggccagcgcg gtcggcgtcg
     2701 ccggggtcat gctgtccacg atgctgcgcg gcgaattcac ctggtcgctg ctgcgtggcg
     2761 ccgccatgca gacgttgcag accgtgggca tgatcgtctg gatcggtatc ggcgcctcgg
     2821 ccctggtcgg cgtcttcaac ctgatgggcg ggatcaagtt cgtgtccgaa ctgatcaccg
     2881 gcatcagcga gaacccgacg atcatcatcc tgttcatgat ggcgatcctg ttcgtgctgg
     2941 gcatgttcct ggactgggtg gggatcgcgc tgctgacgat gccgatcttc gtgccgatca
     3001 tcaag
//
LOCUS       DTVW01000533            1095 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1639527, whole
            genome shotgun sequence.
ACCESSION   DTVW01000533 DTVW01000000
VERSION     DTVW01000533.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1095)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1095)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1095
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1639527"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..287)
                     /locus_tag="EYO87_07075"
     CDS             complement(<1..287)
                     /locus_tag="EYO87_07075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65741.1"
                     /translation="MARAHGARAQMALAFETVYGPPPASGYRLMPFARTTLGAEQPLL
                     NSELLGYGRDPLAPIKDAVTADGEVVVPIDVEAFGFWLKAAFGAPTTTGTGP"
     gene            complement(311..730)
                     /locus_tag="EYO87_07080"
     CDS             complement(311..730)
                     /locus_tag="EYO87_07080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007427727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA transferase"
                     /protein_id="HIC65742.1"
                     /translation="MPTPRETILAALHARLSALPATALRGDVLPERVPAAGLLILRDG
                     EPGEPEVTLSPLRYHYQHRAEIEAVVQGATRDAAFDTLCANIGAALAADRTLGGLCDW
                     VEAEAPRPVDLPVEGAASLKAAVIPVVLHYTTTGPLG"
     gene            877..>1095
                     /locus_tag="EYO87_07085"
     CDS             877..>1095
                     /locus_tag="EYO87_07085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamylcyclotransferase"
                     /protein_id="HIC65743.1"
                     /translation="MQAASRNLSLTPDHIARVHRVVEDTGPTPGVQQQTDADYADWVA
                     QIAGSHPDPHRPTQLFAFGSLIWKPEIEH"
BASE COUNT          177 a          357 c          389 g          172 t
ORIGIN      
        1 ggaccggtgc ccgtcgtcgt cggcgcgccg aaggccgcct tcagccagaa gccgaaggcc
       61 tcgacgtcga tcggcacgac cacctcgcca tcggcggtta ccgcgtcctt gatcggggcg
      121 aggggatcgc ggccgtaacc gagaagctcc gaattcagca gcggctgttc cgcgcccagc
      181 gtggtgcggg caaagggcat cagccgatag ccgctggcgg gcggggggcc gtagacggtt
      241 tcgaacgcaa gcgccatctg cgcccgcgcg ccgtgtgcgc gtgccatggg ggtctcctat
      301 gtgggggaag tcagcccaga gggccggtgg tggtgtagtg caggacgacc gggatcaccg
      361 ccgccttcag gctggcggca ccctcgaccg gcagatcgac cggccgcggc gcttccgcct
      421 cgacccagtc gcaaagcccg cccagcgtgc ggtcggcggc gagcgctgcg ccgatgttgg
      481 cgcagagggt atcgaaggcg gcgtcacggg tggcgccctg cacgaccgcc tcgatctcgg
      541 cccggtgctg gtagtgatag cgcagtggcg acagcgtcac ctcgggctcg cccggctcgc
      601 cgtcgcgcag gatcaggagg cctgcggcag gcacgcgttc gggcaggacg tcgccgcgca
      661 gggcggtcgc aggcaacgcc gaaagccgcg cgtgcagcgc ggcgaggatg gtttcgcggg
      721 gggtgggcat aggaatgcag tttccgagat gcaattgatg tccatgccgc agatacggcg
      781 tcggtcttca acgaagaccc tgattattca tgcggcatgt gctagggtgt atcgagcgcc
      841 ggtcgcccga gtctcgtttt gactgatgag gtcaagatgc aagctgcctc cagaaacctc
      901 tcgctgacgc ctgaccatat cgcccgggtc caccgcgttg tcgaagacac gggcccgact
      961 cctggcgtgc agcagcagac cgacgccgac tatgccgact gggtggcaca gattgccggt
     1021 agccaccccg atccccaccg gccgacccag ttgttcgctt tcggctcgct gatctggaag
     1081 cccgagatcg agcac
//
LOCUS       DTVW01000534            1163 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1641233, whole
            genome shotgun sequence.
ACCESSION   DTVW01000534 DTVW01000000
VERSION     DTVW01000534.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1163)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1163)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1163
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1641233"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..438
                     /locus_tag="EYO87_07090"
     CDS             <1..438
                     /locus_tag="EYO87_07090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008279146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Phasin"
                     /protein_id="HIC65744.1"
                     /translation="PDFTKTFQDMMANFPVDTSSVQDAMKSQSALGEKLAKVALSAAE
                     RSTEISAQWAKDTIARMGEAAIVKSEPSDYAKAMTDFASAYAEVTSEHMAAYAEVAKK
                     VQMDTVDLMLTAGKDIASDAQKATEKAVRDTQTAAKKATAAAK"
     gene            622..>1163
                     /gene="phaR"
                     /locus_tag="EYO87_07095"
     CDS             622..>1163
                     /gene="phaR"
                     /locus_tag="EYO87_07095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010138474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyhydroxyalkanoate synthesis repressor PhaR"
                     /protein_id="HIC65745.1"
                     /translation="MVTRSAPLLIKRYASRRLYNTETSDYVTLDDIAGFIREGREVKI
                     VDLKSGDELTRQYLLQIIAEHEGRGENVLPIDVLTDLVRSYTTSAQSVVPQFLAASYE
                     MLREGQSKVLENMSSMNPMARMPGFEALQRQQQAFLKAMMVGWRGGASGPEPEGDDAG
                     QRAAAPAASETGGRADPAGD"
BASE COUNT          239 a          370 c          366 g          188 t
ORIGIN      
        1 cccgacttta ccaagacctt ccaggacatg atggcgaatt tcccggtcga cacctcgtcg
       61 gtgcaggacg cgatgaaatc gcaaagcgcc ctgggcgaga aactggccaa ggttgcgctg
      121 agcgccgccg aacgctcgac cgagatttcg gcccaatggg ccaaggacac gatcgcccgc
      181 atgggtgaag ccgccatcgt caagtccgag ccctcggact atgccaaggc gatgaccgac
      241 ttcgcctcgg cctatgccga agtgacgtcc gaacatatgg ccgcctatgc cgaggttgcc
      301 aagaaggtgc agatggacac ggtcgatctg atgctgaccg ccggcaagga cattgcctcg
      361 gacgcccaga aggccaccga gaaagccgtc cgcgacacgc agaccgccgc gaagaaggcc
      421 accgccgccg cgaagtgatc gcgacgttcg aggatcggat gaaacggggg gacgggcgac
      481 cgtccccctt gtcctatccg gatcgggcct ccgccaccgc gcgcggccgc ccgaagccgc
      541 gtcacgacgc ggaatttttc tttgcctttt gcgtatgcag caaccatcat ggcccaaatc
      601 tgccgcaagg ggttttcagg gatggtcacc aggtccgcgc cgctgctgat caagcgttat
      661 gccagccggc gcctctacaa caccgagacc agcgattacg tcactctgga tgatatcgcc
      721 ggcttcattc gcgagggtcg cgaggtcaag atcgtcgatc tgaaatccgg tgacgaactg
      781 acacggcaat atcttttgca gatcatcgcc gaacacgagg gccggggcga gaacgtcctg
      841 ccgatagacg tgctgaccga cctggtgcga agctatacca ccagcgctca atccgtcgtg
      901 ccgcaatttc tggccgccag ttacgagatg ctgcgcgagg ggcaatcgaa ggtgctggaa
      961 aacatgtcct cgatgaatcc gatggcccgg atgccgggtt tcgaggccct gcagcgccag
     1021 cagcaggcct ttctgaaggc gatgatggtt ggttggcgcg gcggtgcatc cggccctgag
     1081 cctgagggtg acgacgccgg acagcgcgcc gcagcgcccg cagccagcga aaccggcggc
     1141 cgtgccgacc cggcgggcga cga
//
LOCUS       DTVW01000535            2330 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1643656, whole
            genome shotgun sequence.
ACCESSION   DTVW01000535 DTVW01000000
VERSION     DTVW01000535.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2330)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2330)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2330
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1643656"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1063)
                     /locus_tag="EYO87_07100"
     CDS             complement(<1..1063)
                     /locus_tag="EYO87_07100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018300337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroloquinoline quinone-dependent
                     dehydrogenase"
                     /protein_id="HIC65746.1"
                     /translation="MTRVMTILPLVAAFALPAAAQQTEWPTFQGDLKAQKYARSTQIT
                     PQNVGQLEKAWELHTGDVSDGSGDIPGTVWSATPILANDMLYVGTPFYRILAVRPDTG
                     KVEWTYDPQTELKALTQPELKNRGVAYWQASDGSTGPCSKRVYIGTMDARLHAVDAET
                     GRLCPDFGDAGILDVNQWNKPDANFPLSQLQPPTVTGDTLIMGWAGKDWYDAENPLGS
                     VFAVDARTGKRKWTYQSIPQDYDGLTGTANVWTAMSVDEENGLVYLPVSSPSPDFYGG
                     TRLDPIPQATSITALEVETGRVAWSRQLVHHDIWDYDINAAPTLVDIRKNGQTIPALV
                     ATTKMGLYFVLNRLTGEPVY"
     gene            complement(1069..1437)
                     /locus_tag="EYO87_07105"
     CDS             complement(1069..1437)
                     /locus_tag="EYO87_07105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65747.1"
                     /translation="MSASVSHAATPQSAREELVATAMALPAVLAVVVGLVDYFSHESG
                     IRGTPGALLVTGGSLVLAITAFAVGRMAPGAWRTTLTVMILVGAALTALAAWFLESVL
                     IVLGMVLLMACWAVFIMVAR"
     gene            complement(1632..>2330)
                     /locus_tag="EYO87_07110"
     CDS             complement(1632..>2330)
                     /locus_tag="EYO87_07110"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352251.1"
                     /note="acts in conjunction with GvcH to form
                     H-protein-S-aminomethyldihydrolipoyllysine from glycine;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine dehydrogenase
                     (aminomethyl-transferring)"
                     /protein_id="HIC65748.1"
                     /translation="GVKAHLAPHLPGDPREDGSGAVAAAPYGSASILLISWAYCLMMG
                     GEGLTQATRVAILNANYIASRLAGAYPILFMGNRGRVAHECILDTRPFADHGVTVDDI
                     AKRLIDNGFHAPTMSWPVAGTLMVEPTESETKAEIDRFITAMLAIRDEITEIAEGRIG
                     AEDSPLRRAPHTVEDLVADWDRPYSREQGCFPAGSFRVDKYWPPVGRVDNAYGDRNLV
                     CTCPPLDSYAEAAE"
BASE COUNT          398 a          775 c          766 g          391 t
ORIGIN      
        1 gatagaccgg ctcgccggtc aggcggttca ggacgaaata gaggcccatc ttggtggtgg
       61 cgacaagcgc cggaatcgtc tggccattct tccggatatc gaccagcgtc ggggcggcgt
      121 tgatgtcgta atcccagatg tcgtgatgga ccagctggcg cgaccaggcg accctgccgg
      181 tctcgacctc cagtgcggtg atcgaggtgg cttgcggaat cgggtccagc cgggtgccgc
      241 catagaaatc cgggctgggg ctggacacgg gcagatagac caggccgttt tcctcgtcca
      301 ctgacatggc ggtccagaca ttcgcggtgc cggtcaatcc gtcataatcc tgcgggatcg
      361 actgataggt ccatttgcgc ttgccggtgc gcgcatcgac cgcgaacacc gatcccagag
      421 ggttctcggc atcgtaccag tccttgccgg cccagcccat gatcagcgtg tcgcccgtca
      481 ccgtgggcgg ctgcaactgc gacagcggga aattggcgtc gggcttgttc cactggttca
      541 catccaggat cccggcatcg ccgaaatccg ggcacagcct gccggtctcg gcgtccacgg
      601 catgcaggcg cgcatccatc gtgccgatat agacccgctt gctgcagggg ccggtgctgc
      661 cgtcgctggc ctgccaatag gcgacgccgc ggttcttcag ctcgggctgg gtcagggcct
      721 tcagttcggt ctgcggatca taggtccatt cgaccttgcc cgtatcgggc cggacggcca
      781 gaatgcgata gaagggcgtg ccgacataca gcatgtcatt ggccaggatc ggggtggccg
      841 accagaccgt gcccggaata tcgcccgacc cgtccgagac gtcgcccgta tgaagctccc
      901 acgccttttc aagctggccg acattctggg gcgtgatctg ggtcgagcgg gcgtatttct
      961 gcgccttcag atcgccctga aaggtgggcc attcggtctg ttgcgccgcc gccggcaggg
     1021 cgaaggcggc cacaagggga agaatcgtca tcacgcgtgt catcggatct acctcgcgac
     1081 catgatgaaa accgcccagc aggccatcag cagaaccatg ccaagcacga tcagcacgct
     1141 ttcaagaaac catgccgcca gcgcggtcag cgccgcgccg accaggatca tcacggtcag
     1201 cgtcgtgcgc caggcgccgg gggccatgcg gcccaccgcg aaggcggtga tggccagcac
     1261 cagcgatccg cccgtcacca gcaatgcgcc gggcgttccc cggatgcccg attcgtggct
     1321 gaaataatcg acgaggccca cgacgacagc cagaacggcc ggcaacgcca tcgcggtcgc
     1381 gaccagttct tcgcgggcgc tctgcggcgt cgcggcatga gaaacggatg ctgacatgat
     1441 gtctcctttc ctgtccgggc ccgtccggtc ggcgcaaagg cgccggctgc cggcgggtct
     1501 ggaaaggaaa gaccggcaga gacatgccgg ttccatcccc gcccgcggcc gataccgcaa
     1561 acatcgccct ggatcacggg ggcctcaacc ggcgtcgcgg gtcgcggccg cacgggcccg
     1621 cgcgcaggaa cctattccgc cgcctcggca tagctgtcca gcggcgggca ggtgcagacc
     1681 aggttgcggt cgccataggc gttgtccacc cgcccgaccg gcggccagta tttgtccacg
     1741 cggaacgaac cggccggaaa gcagccctgt tcccggctat agggccggtc ccaatcggcg
     1801 accagatcct cgaccgtgtg cggggcgcgg cgcagcgggc tgtcctcggc gccgatgcgt
     1861 ccctcggcga tctcggtgat ctcgtcccgg atcgccagca tggcggtgat gaagcggtcg
     1921 atctcggcct tggtttcgga ttccgtgggt tccaccatca gcgtgccggc gaccggccag
     1981 ctcatcgtgg gggcgtgaaa gccgttgtcg atcagccgct tggcgatatc gtccacggtc
     2041 acgccatggt cggcaaaggg ccgcgtgtcc agaatgcatt catgcgccac ccggccgcga
     2101 ttgcccatga acaggatcgg ataggcgccc gccagacggc tggcgatgta attggcgttc
     2161 aggatcgcca cccgtgtcgc ctgggtcagc ccctcgcccc ccatcatcag gcaataggcc
     2221 caggaaatca gcaggatcga ggcgctgcca tagggcgcgg ccgcgaccgc tccgctgcca
     2281 tcctcgcgcg ggtcgcccgg cagatgcggg gccagatgcg ccttgacgcc
//
LOCUS       DTVW01000536            4297 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1644400, whole
            genome shotgun sequence.
ACCESSION   DTVW01000536 DTVW01000000
VERSION     DTVW01000536.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 4297)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4297)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4297
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1644400"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..300)
                     /locus_tag="EYO87_07115"
     CDS             complement(<1..300)
                     /locus_tag="EYO87_07115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_351901.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-succinylhomoserine sulfhydrylase"
                     /protein_id="HIC65749.1"
                     /translation="MSQDAFRPRTRAVHHGTRRSQYGEMAEAIFLTQGFVYDSAEQAA
                     GRFVESGPDEFIYARYGNPTSRMFEDRIAALEGTEDAFATASGMAAVNGAMFSLCV"
     gene            complement(649..1974)
                     /locus_tag="EYO87_07120"
     CDS             complement(649..1974)
                     /locus_tag="EYO87_07120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010398174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54-dependent Fis family transcriptional
                     regulator"
                     /protein_id="HIC65750.1"
                     /translation="MSRKLKIAIVDDEPDMRESISQWLVLSGFDTETYASAEDALKVI
                     GADWPGVVVSDIRMPGMDGIAFLKRLMGLDSALPVILITGHGDVPMAVEAMRLGAMDF
                     MEKPFNPDKMTQLAKKATQARRMTLDNRALRRDLSEGQQVMSKLIGSSPVMERLREDI
                     LDLGQADGHVLIDGETGTGKTLVAHALHAVGPRATKKFVPVSCAAYNDEALAARLFGP
                     MEDGLPAVEEARGGTLCLEDVEALSEGLQARLLAFISEQGTPAETRIIAISNARGEGR
                     KAEDSLRPDLFYRLSALKIALPPLRARGEDILQLFTRMTEQFSEEYGCEPPQVSAQEA
                     AQLLQAPWPGNIRQLINVAERAVLQNRRGSGSIASLLMADGEDTQQATTTEGKPLKEY
                     VESFEKMLIDNTMRRHKGSIAGVMDELCLPRRTLNEKMAKYGLQRGDYL"
     gene            complement(1997..4297)
                     /locus_tag="EYO87_07125"
                     /pseudo
     CDS             complement(1997..4297)
                     /locus_tag="EYO87_07125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017140119.1"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT          729 a         1432 c         1357 g          779 t
ORIGIN      
        1 cacgcacaac gaaaacatcg cgccgttgac cgccgccatg ccgctggccg tggcaaaggc
       61 atcctcggtc ccttccagcg cggcgatccg gtcctcgaac atgcggctgg tcggattgcc
      121 gtagcgggca tagatgaatt cgtcagggcc ggattcgaca aagcgacccg cggcctgttc
      181 ggcgctgtca tagacgaaac cctgcgtcag aaagatcgcc tcggccattt cgccatactg
      241 gctgcggcgg gtgccgtgat gaacggccct ggtgcggggg cgaaacgcgt cctggctcat
      301 gatcgtgctg cctttcgatg tcctcgacgg ggttaaaccc gcgcgcggac gatcgcaaga
      361 caaaggccca ccagagagcc cgtgcacccg acagttgacc ataaggacaa gttgttctcc
      421 caccggattt gctgcatttg ctcaatcacc gtccggcggg tttgcggatg gtagcgtggg
      481 accggttggt gttgtccgtc cccttcggcc ctgtcggccg gatcggggga ggatcgtttg
      541 acgagtatgg ttcgcgcgtc cctgcaagat gtgtttgtga cccgtgtgct gttaccagca
      601 ggggaagggg agctccgggg gcgaagaccg cccccggttc aaatccgcct acaggtagtc
      661 cccgcgctgc aagccgtatt tggccatctt ctcgttcagc gtccggcgcg gcaggcacaa
      721 ttcgtccatc accccggcga tgctgccctt gtggcggcgc atggtattgt cgatcagcat
      781 cttctcgaaa ctttcgacat attccttcag cggcttgccc tcggtcgtgg tcgcctgctg
      841 cgtatcctcg ccatcggcca tcagcagcga ggcgatggat cccgacccgc gccggttctg
      901 cagcaccgcc cgttcggcca cgttgatcag ctggcggata ttcccgggcc acggcgcctg
      961 cagcaattgc gcggcttcct gggcgctgac ctgcggcggc tcgcagccgt attcctcgct
     1021 gaactgttcg gtcatgcggg taaaaagctg caagatgtcc tcgccgcgcg cgcgcagcgg
     1081 cggcagcgcg atcttcagcg ccgacaggcg atagaacagg tcgggacgta acgaatcctc
     1141 ggccttgcgg ccctcgcctc gggcgttcga gatggcgatg atgcgggtct cggccggcgt
     1201 tccctgttcg ctgatgaagg ccagcaggcg ggcttgcagc ccttcggaca gcgcctcgac
     1261 atcctcgagg cacagggtgc cgccgcgcgc ttcctcgacc gccggcaggc cgtcctccat
     1321 cggaccgaac agccgcgcgg ccaacgcctc gtcgttatag gcggcgcagg agacgggaac
     1381 gaatttcttc gttgcgcgcg gacccaccgc gtgcagggca tgggcgacca gcgtcttgcc
     1441 ggttccggtc tcgccgtcga tcaggacgtg cccatccgcc tgccccagat ccaggatatc
     1501 ctcgcgcagg cgttccatga ccgggctgga tccgatcagc ttggacatga cctgctggcc
     1561 ctccgacagg tcgcggcgca gggcgcggtt gtccagcgtc atccgccgcg cctgagtggc
     1621 cttcttggcc agctgcgtca tcttgtcggg attgaacggc ttttccatga agtccatggc
     1681 gcccaaccgc atcgcctcga ccgccatcgg cacatcgccg tggccggtga tcaggatcac
     1741 gggcagcgcc gagtccagcc ccatcagccg cttcaggaac gcgatcccgt ccatgccggg
     1801 catgcggata tcggacacga caacgcccgg ccagtccgcc ccgatgacct tcagggcatc
     1861 ttcggcactg gcataggttt cggtgtcgaa tcccgacagg accagccact ggctgatcga
     1921 ttcccgcatg tcgggttcgt cgtcaacaat cgcaatcttc agcttgcggg acatcgggca
     1981 tcctctctct ttgttcttat tcggcggcca tcgcctcgcg cgatcgtccg ggccggtgca
     2041 ggggcaactc gacctgaaag acggcgccgc ccccggtttc gttatgtgcg gtcaggcgcc
     2101 ccccgaaatc cgccacgatg gtagaggaaa tcgcaaggcc caatccggtt ccttcaccgg
     2161 gcttcttcgt cgtccagaac ggttcgaaca gcttttccag gtcggaaaca cccggtccgt
     2221 tgtcacgcac ggacacatag gcgtgagagc cgctctcgac cgagatgtcg atctgcgcct
     2281 cgcggcggtc cctgaccgca tcgatcgcgt tccgcagcag gttgatgatg acctgttcca
     2341 gccggatacg gtcggccagc accatcacgc ggccgcgcgg caggttgcga ttgacgcgga
     2401 tcgtgcgcgc gcgaagctga ggttccatca tcgtcagcgc actgctgacc gcggcgcgca
     2461 gatcgaccgg ctcgaccgcc tcgccgccct tgcgggcgta ggatttcagc tgccgggtga
     2521 tcgcgcccat ccgctcgatc agatcgtcga tgcgctggaa gctggacaat gcctcttcgc
     2581 cgcggccgcg ttgcagcagc agccgcgcgc cggccagata ggtcttcatc gcggccagcg
     2641 gctggttcag ttcgtggctg acaccggccg acatctcgcc cagagccgcc agtttcgaac
     2701 tttgctggac cgtctgctcg gccacccgca gctctttctg aacccgttcg cgttccgcga
     2761 tctctcgggt caggcgcagg ttcagggccc gcagatcggc cgattcgcgc atataggcgg
     2821 ccgattgccg ccgcgcccga cgcgacagga cgtagaaggt gcccgccagc aggatcgcaa
     2881 aacccatgat ttccagcgcg aggacggcgt tcacacgctc gcggatcgaa acataggtgg
     2941 tgaagctgac catccgccag ccccggaaag ggatccgcga ttcgttgcgc atcacggcgc
     3001 ggccctgaag ataggcgtcg gcgggggggc tggtccagtc ggccgtgacc tggaatgccc
     3061 gctggatcgc tgacggcgcc gatcgcaccg ccagcgcctc gggcatggtc agcccgcgcc
     3121 agcgcggctc ggtcgccagg atgatcgtgc cttcgctgtc ggtcaccgca acggcgtccg
     3181 agatccccgc ccaggaccgt tccagccggg tcagatccgc gcccaccacg atcacgccca
     3241 gcgtcttgcc atcggccacc accgcgcgcg aataggtgaa ttcgaaggca ccggacccct
     3301 gattcgagac cgtgaagacc gtgtcgcgcg agcgcagcgc ctcgacataa taaggtgcca
     3361 gtgcgttgtt gctgccaagc tgatagcggt cggtcgagcc gaccgtgcgc ccggaagcgt
     3421 ccagaagccg gatcgaggcc gcgccgattt ccttctgcgc ctcgatcagc cgtgccgagg
     3481 tcatcgagaa ttcgttgccc tgcagcgact ggatcagcgt ggggtcgcgc gccagcagca
     3541 gcggaaccac ctgattgcgc tgcaattccg acatcagatt gccggtatac aacgccagcc
     3601 gcaattccga tcggacacgg gtattttcgg aaaaccgctc ggtcagccag gtgttggttg
     3661 tccagatgga agccagcgcc gtcaggaaga tcagcgcgat ggccaggcgc agccaccacg
     3721 gattggcggg ctggggccgg cccgcgcgcg cgccttcgtc caaggcgccg ctgtcctgat
     3781 cctcggtcac gggttcatcc ggcgaaaatc ctgtaatcgt cgcaatctag gcccagaagg
     3841 acgatcgctc aagtcaggcg tgaaccagat ggtccaccag cgaccggaac agcaccgcgc
     3901 catcggtgcc gcccagatcg ggatcggcgg cgcgttcggg atgtggcatc agccccagaa
     3961 cgcggcggtt ttccgacagg atccccgcaa tatcggcgat cgaaccattg atgcccggcg
     4021 cataggtgaa tgcgatccgg tcctggtcgc gcagttcggc cagcccgttg tcggtgatct
     4081 gataattgcc gtcgtgatgg gccacgggaa tggtgatctg ctgtccggcg gcatagccgg
     4141 ctgtgaaggc gctagcggtc gtggccacgt tcagccgcgc cggattgcac agaaaggtca
     4201 gcccccgatt gcgcatcaac gcgccaggaa gaagcccgag ttcggtcagc acctgaaagc
     4261 cgttgcagat gcccagcacg aagccacccc ttcgggc
//
LOCUS       DTVW01000537            3677 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1645322, whole
            genome shotgun sequence.
ACCESSION   DTVW01000537 DTVW01000000
VERSION     DTVW01000537.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3677)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3677)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3677
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1645322"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            218..1609
                     /locus_tag="EYO87_07130"
     CDS             218..1609
                     /locus_tag="EYO87_07130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009803537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA synthetase"
                     /protein_id="HIC65751.1"
                     /translation="MTACRPTVADALDGLFDPRTIAVVGASRTKGKLGQAVMALLKSN
                     GYSGTIIPVNPSGGEIEGLPAVRSLDEIDSPIDVVVLATPVGVALDALETCTRLDVKV
                     VVGVTSGFSEAGEEGHDNEERLRRIMQDAPFRLVGPNCEGVVRPAADLQLTFSPMFND
                     LRPGPVAMISQSGALAGLMALRLGERGVGINAIVSSGNETDLTAADLLDYLGNDPQTR
                     VVLCYVEELRDGRRFSEAAQRLTQAGKHIVAVKGGRSRAGSRAVQSHTGAMAGDDRVI
                     SAVFRETGVIRARESVAAVDAVTALAAGRRPAGNRVGIISVTGGLGVEMTDLAESAGF
                     EVPVLDETTQTALSRYVPFYGSVTNPVDLTGVVLANPTYVGRCLEAVAADPGVDIAIA
                     IITFVPDQQFIEALAEAFDSTDKPILIVWTGSARSNASGEALRERAVPVYDSPARAAS
                     GLAALAVATGEVA"
     gene            1606..2277
                     /locus_tag="EYO87_07135"
     CDS             1606..2277
                     /locus_tag="EYO87_07135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009803538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65752.1"
                     /translation="MTQRETLENWQRAGRTVIHEADAKDLLQRIGIPVPRRDPDHGRC
                     VAKLCHDDYPHKSDHGLVRLGLSPDEAKQAAAEMAERFAGGTALIEEMEEGSVAEWII
                     GCKRDDTFGPIVLAGPGGILVELIDAAEIRLAPATPQTAAAMLRSGPGARLLTGLRGA
                     EPADKDALADLISRISVFFAENADLISEIEINPVMVRADGKGLVAADALIVLSSKADG
                     QEKST"
     gene            2337..2774
                     /locus_tag="EYO87_07140"
     CDS             2337..2774
                     /locus_tag="EYO87_07140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009504597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dehydratase"
                     /protein_id="HIC65753.1"
                     /translation="MTETDVVNFCMLTGNWLELHSNVEHAKSSLYGQRLVQGSLVFSI
                     VNAMIPFDSSVLAAFYGCDKLRFLRPTFINDTLWARTEIIDLKDHDERHGVVTSKLEG
                     INQRDETVLRCEFSLLIRKSRLDRPGEPAKIRAAHDKTQGQSA"
     gene            2771..>3677
                     /locus_tag="EYO87_07145"
     CDS             2771..>3677
                     /locus_tag="EYO87_07145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009803540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
                     /protein_id="HIC65754.1"
                     /translation="MNFLTPEQEMWRATVERFVDEEIGRDYIRNCDRERKYPYEAYEK
                     VAKQGWLGILFSEESGGLGGDIMDYALMCEGLAKYGFDFSTGLMVATFTAMNVEKFGT
                     PEQKERYIQPFLNGDIRFSISISEPGAGSDAASTKTRARRDGNGWVVNGQKLWCSGAA
                     ADNAILAMLTRTDPDAPKHKGLSVFLIPNDTEGLDIRKLPTMARRATGTTEIFVDDVK
                     LPADALLGTENDGWKIITDHLELERVAVAAAYVGNAQTAVDDALRYAHERIQFDKPIF
                     DFQVIRHMLADMQTQVDAARLLVYRA"
BASE COUNT          733 a         1103 c         1148 g          693 t
ORIGIN      
        1 ccctgacatc gctcagtggc ccattttcca ttttcacgtg tctgcctcgt tctgcgaatt
       61 ttccgacgtc aagccctagt ttgcggctct gaaagcctca ttctgctcgg aactagaatc
      121 cattgcgaga acaatcgaac aaccgttaga tcgccgaaac gagccgatgt tttttcactt
      181 gacggaggaa agaatggcag agccaaacac gaatcgaatg acggcatgcc ggcccacggt
      241 agccgacgca ctggacgggt tgttcgaccc tcgcaccatt gcggtggtcg gcgcgtcccg
      301 caccaagggc aagttggggc aggccgtcat ggccctgctg aagagcaacg gttacagcgg
      361 cacgattatc cccgtgaacc cttcgggcgg cgagatcgaa ggccttccgg ctgtgcgcag
      421 tctggacgag attgacagcc cgatcgacgt ggttgtgctg gcaacgccgg tcggggtcgc
      481 gctggacgct ctggagacct gcaccaggct cgatgtaaag gtcgtggtcg gggtcacctc
      541 gggcttttcc gaagccgggg aagaagggca tgacaacgaa gagcgcttgc gccggatcat
      601 gcaagacgcg cccttcagac tggtcggacc gaactgcgaa ggcgtggtgc gccccgcggc
      661 ggacctgcaa ctgaccttca gcccgatgtt caacgatctt cggcctggtc ccgtggccat
      721 gatttcccag tccggcgcgc ttgcgggcct tatggcgttg cgcctgggcg aacgcggcgt
      781 gggcatcaac gccatcgttt ccagcggcaa cgaaaccgac ctgaccgcag cggacctgct
      841 ggattatctg ggcaacgacc cccagacgcg ggtggttctt tgctacgtcg aggaactgcg
      901 cgacggacgc cgtttttccg aagcggccca gcggctgaca caggcgggga agcatattgt
      961 cgcggtcaag ggggggcgca gccgcgccgg gtcacgcgcg gtccagtcgc ataccggcgc
     1021 catggccggg gacgaccggg tgatcagcgc ggtctttcgc gaaaccggtg tcatccgcgc
     1081 ccgtgaatcc gtcgccgccg tcgatgccgt gacggcgctc gccgcgggtc gacgacctgc
     1141 cggaaacagg gtcgggatca tttctgtcac cggcgggctt ggcgtcgaaa tgaccgactt
     1201 ggccgaaagc gccggcttcg aggttccggt gctggatgaa acgacgcaga cggcgctgtc
     1261 gcgctatgtg cccttttatg ggtcggtgac aaacccggtc gatctgaccg gtgtggtttt
     1321 ggcgaatccc acatatgtcg gacgctgtct ggaggccgtt gccgccgatc cgggcgtgga
     1381 tattgccatc gcaattatca catttgtgcc agatcagcag ttcatcgagg ccttggccga
     1441 ggcgttcgac agcacagaca agccgattct gatcgtctgg accggttcgg cacgcagcaa
     1501 tgcctcgggc gaggcgctgc gcgaacgagc cgttcctgtc tatgattcgc ccgctcgggc
     1561 ggcatcgggc ctcgccgcac tcgcggtcgc gacaggagaa gtggcatgac ccaaagagaa
     1621 acgctggaaa actggcagcg tgccgggcgc acggttatcc acgaggccga tgcgaaggat
     1681 ctgctgcaac ggattggaat cccggtgccc cgacgtgacc ccgaccacgg gcgctgtgtc
     1741 gccaagctgt gtcacgatga ctatccgcat aagtccgatc acgggctcgt ccgtttgggt
     1801 ctttcccccg acgaggcgaa acaggccgcc gcggaaatgg cggaacgttt tgcgggcggc
     1861 acggcgctga tcgaggaaat ggaagaaggg tccgtggccg aatggattat cggctgcaaa
     1921 cgcgacgaca cctttggtcc gatcgttctg gccggtcctg gcggcatcct tgtagaactg
     1981 attgatgccg ccgaaatcag gcttgcgccc gccaccccgc aaactgccgc ggccatgctg
     2041 cgatcgggtc cgggggcgcg gttgctgact ggactacgcg gcgcagaacc ggccgacaaa
     2101 gatgccctgg cagacctgat ttcacgcata tctgttttct ttgccgagaa cgccgatctg
     2161 atctcggaaa ttgaaatcaa ccctgtgatg gttcgggccg acgggaaggg attggtcgcc
     2221 gccgatgcct tgatcgtttt gtcatcaaag gcggacggac aggagaaatc aacgtgatac
     2281 gtcacccttt tggagagttg tcacttggcc agaccggcat ttcgagcggt cggacgatga
     2341 ccgaaaccga tgtcgtcaat ttctgcatgt tgaccgggaa ctggctggaa cttcactcca
     2401 acgtcgagca cgccaaatcg tctctgtatg gccagcgcct cgtgcagggc agcctcgtgt
     2461 tctcgatcgt caatgcgatg atccccttcg acagttccgt gctggccgct ttctatggct
     2521 gtgacaagct acgctttttg cggcccactt ttatcaacga caccctttgg gcccgcaccg
     2581 aaatcatcga cctgaaggac catgacgaaa ggcacggcgt cgtgaccagc aaactggaag
     2641 gcatcaacca gcgggacgaa acggtcctgc gctgcgagtt cagcctgctg atccgcaagt
     2701 cgcgtctgga tcgccccgga gaaccggcca aaatccgtgc ggcgcacgac aagacacaag
     2761 gacagagcgc atgaactttc tgacacccga gcaagagatg tggcgcgcca ccgtcgagcg
     2821 tttcgtcgac gaagagatcg gccgcgatta tatccgcaat tgcgaccgcg agcgcaaata
     2881 cccctacgaa gcctatgaaa aagtggccaa gcagggctgg ctcggcatcc tgttttcaga
     2941 agagagcggc ggtcttggcg gtgacatcat ggattatgcc ctgatgtgcg aagggttggc
     3001 caaatacggc tttgacttct cgaccgggtt gatggtggcg acgttcaccg cgatgaatgt
     3061 cgagaaattc ggcacgcccg agcaaaaaga gcggtacatc cagcccttcc tcaatggcga
     3121 catccgcttt tcgatctcga tttccgaacc gggcgcgggg tcggatgcgg catcgacaaa
     3181 gacccgcgcg cggcgcgacg gcaacggctg ggtcgtcaac gggcagaaac tgtggtgctc
     3241 gggcgctgcg gccgataacg caatccttgc aatgctgacc cggaccgacc ccgacgcgcc
     3301 caaacacaag gggctgtcgg ttttcctgat ccccaatgac accgaaggtc tggacatccg
     3361 caagctgccg accatggcgc gccgcgcaac cggcaccacc gagattttcg tggacgacgt
     3421 gaaactgccg gccgatgcgc tgctgggcac ggaaaacgat ggctggaaga tcatcaccga
     3481 ccatctggaa ctggaacgcg tggccgtggc cgccgcctat gtgggcaatg cccagacagc
     3541 cgtagacgat gctctgcgct acgcccacga acggattcag ttcgacaagc cgatcttcga
     3601 ctttcaggtg atccgccaca tgctggccga catgcagacc caggtcgatg ccgcccggct
     3661 gttggtttat cgcgccg
//
LOCUS       DTVW01000538            2833 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1645849, whole
            genome shotgun sequence.
ACCESSION   DTVW01000538 DTVW01000000
VERSION     DTVW01000538.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2833)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2833)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2833
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1645849"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(35..430)
                     /locus_tag="EYO87_07150"
     CDS             complement(35..430)
                     /locus_tag="EYO87_07150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008327303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65755.1"
                     /translation="MRFIRHAVMATSLAILPLASAAQEPSDERIKELALQAIRENPQI
                     IIEAIQSLEADQAAAQSQAQSDVLTNQRDLLERDPNAPVLGNPDGDVTVVEFFDYNCP
                     YCRRAMAEVEGLVEDDENVRLVFCSASRE"
     gene            complement(447..914)
                     /locus_tag="EYO87_07155"
     CDS             complement(447..914)
                     /locus_tag="EYO87_07155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005613370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HIC65756.1"
                     /translation="MRTYSIVAALVLIAAGIGFGFWRQSGTDAATGAMPETVDIAKGQ
                     QLYAESCAACHGANLEGQPDWRQAGPDGVLPAPPHDETGHTWHHADRMLFDYTKLGGK
                     AALARQGMDFASGMPGFGDQLSDAEIWNIIAYIKSTWPERERAIQAERNADPG"
     gene            1553..2323
                     /locus_tag="EYO87_07160"
     CDS             1553..2323
                     /locus_tag="EYO87_07160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018065813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65757.1"
                     /translation="MTSEKRRTLLIFSGLAALYAGFRIVPGWGGDKLVFEKMNDPSGF
                     RRLAGGESSTGFDPFFGLKPQSRSNLADVESRVRQNICASLYGETPRDGQPVPVAFFS
                     DYYCPYCRVLTKRLSAIEARPDAGIRVIVHEWPLLGQASTLAAKAALAARIQGAYAAF
                     HERLMKTPFQVTPEYLRVLAQDIGIDQAKMFADMDSDSVIRDLENSAALARILAFIGT
                     PGTVIGRTAIQGEVSEGTLLDVAAQEQEEGWTSVCRQT"
     gene            2380..>2833
                     /locus_tag="EYO87_07165"
     CDS             2380..>2833
                     /locus_tag="EYO87_07165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018065812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65758.1"
                     /translation="MAAFVAATATWAAESDSFSNPAIEARLLTAENGVAPGAGTISAG
                     LYLRLGKDWKTYWRSPGEVGIPPSIDWSGSSNVAETEFLWPAPQRFTAFGIENFGYHE
                     EVVFPISITLKNPDAPVELRARVSLLTAVGRLTEKVLLPQLVGHFQKSK"
BASE COUNT          531 a          878 c          880 g          544 t
ORIGIN      
        1 aaagcctttc gaatcggttg atttggctga ctggttattc cctggaggca ctacagaaga
       61 caagcctgac gttttcatcg tcttctacaa gaccctcgac ctcggccatg gcccgtctgc
      121 aataggggca attgtagtcg aagaactcga cgacggtcac atccccgtcc ggatttccga
      181 gaaccggcgc attcgggtcg cgttcaagca gatcgcgctg gttcgtcagg acatccgact
      241 gcgcctgcga ctgcgcggcg gcctgatcgg cttccaggga ttggatcgcc tcgatgatga
      301 tctgcggatt ttcgcggatg gcctgcaacg ccagttcctt gatccgctcg tcgctgggct
      361 cctgtgccgc cgaggcaagc ggcaggatcg caaggctggt ggccatgacc gcatgtcgaa
      421 tgaatcgcat ttctatgtcc tttccgctaa ccggggtcag cattccgttc ggcctggatc
      481 gcacgctcgc gttcgggcca ggtcgatttg atataggcga tgatgttcca gatctcggca
      541 tcagacaact ggtcgccgaa accgggcatt ccgctggcga aatccatgcc ctgacgcgca
      601 agagccgcct tgccgcccag tttcgtatag tcgaaaagca tccggtcggc atgatgccat
      661 gtatgccccg tctcgtcatg cggcggcgcg ggcagaacgc cgtcgggacc ggcctggcgc
      721 caatcgggct gcccttcgag attggcgccg tggcaggcgg cgcaggattc ggcatagagc
      781 tgctgacctt tcgcaatgtc gacggtttcc ggcatcgcgc ccgtggcggc atccgttccg
      841 ctctggcgcc agaacccgaa accgatgccg gcggcgatca ggaccagcgc ggcgacgatt
      901 gaatatgttc gcatccgtct cacccttccc aggtcatcat gcccgccggg acgcgaccgg
      961 acatctgtcg gtgaaattgc caatcgccgg aattgcccgc gaccgaaacg aaattgcgcg
     1021 cctctccagc gccggtcatc gggcgatcag gcatcggcgt tctggctatc ccggccacaa
     1081 ggaaacgtcc acggtcgaat ccttcgaccg gccatcttcc ggacgctgcc gtttccgttc
     1141 ccttccgatc agccgtgacc gccttccagc gcaggagggt caagcccaat cggcctgaca
     1201 taaaagtgaa ttccggatcg gttcgtcgca ttgaccttcc cgcgcaggag gtcgccaacg
     1261 agatcggacc atccaccgga caggcagaag gccggacatg cagcgatgtc acggaaaaac
     1321 ccggcctccg tcggccgaga tggcgacact gaggacgcgg ccgcgcgccc cggcgcagcc
     1381 aaccccggcc actgcgcgtc ggctgggcat cagggccgca ggttgatatt gtccgccttc
     1441 ccgggatcgt cccgggttcg ggcggaatcg tgacgatggc cgcgcgggtg ccctggcctc
     1501 cgcaagccga atgggattgt gaaccgatcg caatgaaagc gaacccgccg aaatgacctc
     1561 cgagaaacga cgaacgctgc tgattttttc cgggctcgcg gcattgtatg ccggctttcg
     1621 gatcgttccg ggctggggcg gggacaagct tgtcttcgag aagatgaacg acccgtccgg
     1681 tttccggcgg ctggcgggcg gcgaaagttc gaccggtttt gacccgttct tcgggttgaa
     1741 gccgcaatcg cgaagcaacc tggcggatgt cgaatccagg gtccggcaga atatctgcgc
     1801 ctctctctat ggcgaaaccc cgagggacgg ccagcctgtt ccggtggcgt tcttttcgga
     1861 ttattactgc ccctattgcc gtgtgctgac caagcggctt tcggccatcg aggcgcgtcc
     1921 cgacgccggc atccgggtga tcgtgcatga atggccgctt ctgggtcagg cctcgacgct
     1981 ggccgcgaaa gcggcactgg cggcaagaat ccagggggcc tatgcggcgt tccatgaacg
     2041 tctcatgaag acgccgtttc aggtcacgcc cgaatatctt cgcgttcttg cgcaggatat
     2101 cggtatagac caggcgaaaa tgttcgcgga catggacagc gacagcgtta tccgtgacct
     2161 tgaaaacagc gcggcactgg cccggatact ggccttcatc ggcacgcccg ggacggtgat
     2221 cggccgaacg gcgatccagg gcgaggtcag cgaaggcacc cttctggatg tcgccgccca
     2281 ggaacaagag gaaggctgga cttcggtatg ccgacagacg tgaaaaacaa catcccgggc
     2341 cgggtcgatc gggtcatccg ctgcctgatc gtcgccctga tggcggcttt cgtcgctgca
     2401 accgccactt gggccgcgga atcggacagt ttcagcaacc cggccatcga agcccgcctg
     2461 ttgacggccg aaaacggcgt cgctccgggc gcagggacga tctcggcggg gctttatctt
     2521 cgactgggca aggactggaa gacctactgg cgctcgcccg gagaggtcgg gatcccgccc
     2581 tcgatcgact ggtcggggtc cagcaacgtg gcagagaccg aatttctgtg gcccgcgccc
     2641 cagcgattca ccgccttcgg gatcgagaat ttcggctatc atgaagaggt cgtctttccg
     2701 atcagtatca cgctgaagaa tccggatgcc cctgtcgaat tgcgggcccg ggtcagcctg
     2761 ctgacggcag tgggaagact cacggaaaag gtgttgcttc cccaattggt gggacacttc
     2821 cagaaaagca aac
//
LOCUS       DTVW01000539            1036 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1646789, whole
            genome shotgun sequence.
ACCESSION   DTVW01000539 DTVW01000000
VERSION     DTVW01000539.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1036)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1036)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1036
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1646789"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
BASE COUNT          256 a          184 c          295 g          301 t
ORIGIN      
        1 agatcctaca aatgcgtcta acttatcaag tggatcagtt cctgtggcac agttaggaaa
       61 tgttccagct gacacaggac ttcaagctga tatagcctta cttgctttca aaacacaggc
      121 aaacggttct ttggctcgct ataatttagt cgatcaatct gtggatgctt ttgaatcggc
      181 agcgggtgta gatgcatcag cttctacaaa tgaaacttat gattctgcaa gtaagtttta
      241 tagtggaact gcttatggtg catatactgt ggtaggacat accactgtac aaactgcaaa
      301 ttggacagtt cccgcaagtg tatatacagt agaagctctt attgttgctg gtggcggttc
      361 gtggggagct aatcactatg ctggtggtgg tggagctggt ggtattgttc atcatgctag
      421 ttatacagta attcctgcag cggtgctatc gtatactgta ggggcaggag gtcccaatat
      481 aacagctccc acatatgcag ctggggacga tggagatgat tcagtttttg atggtatgac
      541 tgcaataggt ggtggtggta gtgctggtgg tagtggaact actccagcta aacaaggtgg
      601 atctggaggt ggtggtgcta acggtggctc aacgggagct acatcaaatc aacctgctgt
      661 tgcaggagca tcagtttatg gtaattcagg cggaaataga tgtaacccgg ctggcgattg
      721 tatgcaaggt ggaggtggtg gagctggtgc agttggtgct gatggatctt ctgcttcagc
      781 tgattatcct aataccacta caggagctgg aggtgtagga aaactttttg ttggatttga
      841 agcatatggt acagattcaa gtaacgtcgc atctactgga tctaatggtg gttggtttgc
      901 tggcggtggc ggtggcgctt atcaggctcc gaaattagct aatttagttg ctgctggagg
      961 aataggaggt ggaggtccta gtggtactag taatccagta aattcagtag gtcctattgc
     1021 tgctctagcc aatact
//
LOCUS       DTVW01000540            1119 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1647860, whole
            genome shotgun sequence.
ACCESSION   DTVW01000540 DTVW01000000
VERSION     DTVW01000540.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1119)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1119)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1119
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1647860"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            98..394
                     /locus_tag="EYO87_07170"
     CDS             98..394
                     /locus_tag="EYO87_07170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018000299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65759.1"
                     /translation="MRCLLLLLLLSACATSSPGMMGGTRQAVRVEGLDFVVFRKGDRV
                     EIVRMGYLSRPQRDRVPALMAEAGERVTGCRVLADSIRTRLPGDTGVAQFDLVC"
BASE COUNT          217 a          344 c          375 g          183 t
ORIGIN      
        1 ggccgagctg gccgcccgcg ccgaatcgct ggccgagaag ctggaggaac agcaggggtc
       61 ttaacgcttt gttaacccgg cgatgcgaca agcggtcatg cgctgcttgc ttttgcttct
      121 actgctgtcg gcctgcgcca cctcgtcgcc cggaatgatg ggcggaacgc ggcaggcggt
      181 gagggtggaa ggactggatt tcgtcgtctt tcgcaagggc gaccgtgtgg aaatcgtccg
      241 catgggatac ctgtcccgcc cccagcggga cagggtgccc gccctgatgg ccgaggccgg
      301 ggaacgggtc acgggctgcc gcgtgctggc agacagcatc aggacccgtt tgcctggcga
      361 cacgggggtg gcccaattcg atctggtctg ctgaggcggc gcgaacaggc gcggaccgct
      421 cttgtcggtc ggcaggccga accctgaccc gagattcagg ccacggcctg cgccattccg
      481 ttcgtcccgc aaagcgcgtg catcgtgaca tgtcggcagc ggcggcggac atcatcccac
      541 gggatcgaag cgttcgtgaa acattcgtcc ggagcgatcg tccccggaac tcaggcgcgt
      601 catgggacgc gccgtctcgc gccccgtatg gtctgccgct tgcgcccgcg ctgaaaagga
      661 cgatcggccc ctctttatcc ggcaggacgg aatcgccggt cggagcgcct gtctcgatca
      721 agtcgcctct gtcgtgagga agggggtgcg cttgcgcgaa ggcaaagcag gctgcaaggc
      781 aatcgccggc caaacaagcc gcacaacacc ccttgccgcc aagctgaaac agttcaccgg
      841 tcgttgtgga aaggctgggg ggcggatgtc cggtctggcg gtgatttcgc cgggtccatc
      901 tctgatcgac gacatgccga gagaaccgca atggcaagca aagcgttcga tatatcggac
      961 gaggacatca caccctgttt cggcctgtag ccggatcccg cttcggcgcg aagcaatcgg
     1021 gcagagaaga ggcgcccgat gtcctgcaaa tgaaagaaaa gaggacccca tggacccgag
     1081 cgagaagcaa gccgcccatc gcggcgaaaa aaacaccga
//
LOCUS       DTVW01000541            2960 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1648332, whole
            genome shotgun sequence.
ACCESSION   DTVW01000541 DTVW01000000
VERSION     DTVW01000541.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2960)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2960)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2960
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1648332"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..352)
                     /locus_tag="EYO87_07175"
     CDS             complement(<1..352)
                     /locus_tag="EYO87_07175"
                     /inference="COORDINATES: protein motif:HMM:PF09339.8"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IclR family transcriptional regulator"
                     /protein_id="HIC65760.1"
                     /translation="MRNGMADDTGVKLVPAVQNAMSIMRLLAAQGRPMGATQIARETE
                     LNVSSAFNILRTLSHEGLLSFDPEAKTYRMGMGLMEFAVPLLGANPADVIRPSLTAIA
                     QDHQTMIALWQITPT"
     gene            431..1597
                     /locus_tag="EYO87_07180"
     CDS             431..1597
                     /locus_tag="EYO87_07180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007427943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
                     /protein_id="HIC65761.1"
                     /translation="MPTGVDSDVFEQLVDTVERFARERLIPAERRVEEEDTIPEEIVS
                     EMKEMGLFGLSTPEDFGGIGLNVPQEARLIETLCYASLTFRSLIGTNVGIGSQGIVMD
                     GTQAQKEQWLPGVASGDIIASFALTEPDNGSDAAGIRTSARRDGGDFVINGTKRYITN
                     AVRAGVFTVFARTDPDKDGAEGVSAFIVPADTPGITVAKPDRKLGQRGTKTSDVIFDN
                     VRVPESAILGGPERLNQGFRTAMKVLDRGRIHVGAMAVGQSQRMLDIATDYALERKQF
                     GKPIGEHQLVQGMLADCQAELHAARALVRATADKFDREGKAIIEASCTKYFCTEAAGR
                     IADRALQIHGGAGYMAEYDIERLYRDIRLLRIYEGTSQIQQLVIARRTLAQRAA"
     gene            1601..2020
                     /locus_tag="EYO87_07185"
     CDS             1601..2020
                     /locus_tag="EYO87_07185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007798664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PaaI family thioesterase"
                     /protein_id="HIC65762.1"
                     /translation="MAAQQPRRLADMPAQSKFSVLLGIEIVTCTPQEVVCTMVVTEDM
                     SNRNGVLHGGALMTLSDTAAGTASFISSPAEISNTTVEAKTNFIRPVKLGDTVTARCE
                     PVHVGRATSVLQVTMTRGDGKVVGVTTQTHLFLGWKD"
     gene            2043..2423
                     /locus_tag="EYO87_07190"
     CDS             2043..2423
                     /locus_tag="EYO87_07190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007798666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleic acid-binding protein"
                     /protein_id="HIC65763.1"
                     /translation="MKDIETGAVGPQAAYEAYLAAGRFMIQRAQSTGEYVFWPKVTSP
                     NGATDLEWVEAKGTGTIYAITVNRARTGFWNVALVELDEGVRMMSTLPGVETAEIGAR
                     VKARIEETEDGPRVVFDLAKEDAA"
     gene            2420..>2960
                     /locus_tag="EYO87_07195"
     CDS             2420..>2960
                     /locus_tag="EYO87_07195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_249707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiolase"
                     /protein_id="HIC65764.1"
                     /translation="MSDSMRGKSAIVGMATAGVGEAPGFSAMELLGQAAVKAVNDAGL
                     KLQDIDGVFAATSSHAFPTMSVVEYLGLKPKFFDGTNVGGSSFEMHLLQATLALEAGL
                     CDAALVCYGSNQRTAGGRLVSMSEPQWHETPYKPRHPITAYALATSRHMAEYGTTREQ
                     LADVALAARGWANLNPEAFA"
BASE COUNT          579 a          918 c          959 g          504 t
ORIGIN      
        1 cggtcggcgt gatctgccac agcgcgatca tcgtctggtg gtcctgcgcg atggcggtca
       61 gcgacgggcg gatgacatcc gccggattgg cgcccagcag gggcaccgca aactccataa
      121 gccccatccc catgcggtag gtcttcgcct ctggatcgaa gctcagcagc ccttcgtggc
      181 tgagcgtcct gaggatgttg aaagccgagg agacattcag ttcggtctcg cgcgcgatct
      241 gggtcgcccc catcggacgg ccctgcgctg caagcagccg catgatgctc atcgcgttct
      301 gcaccgcggg tacgagtttc actccggtat cgtcggccat gccattcctc atgtagaata
      361 taatttacta tacagaatat ctttgctaga tcaaggccag aacggaattg tgccgaggga
      421 ggaaggaacg atgccgactg gcgtggatag tgatgtattt gaacaacttg tggatactgt
      481 ggagagattc gcccgagagc gattgatccc cgcagaacgc cgcgtcgagg aagaggacac
      541 catccccgaa gagatcgtct cggagatgaa agagatgggt ctctttggtc tctccacccc
      601 cgaagacttc ggcggcatcg ggctcaacgt gccgcaggag gcgcgtctga tcgagacgtt
      661 gtgctacgcc tcgctgacct tccgctcgct gatcgggacc aacgttggga tcggctctca
      721 gggaatcgta atggacggca cccaagcaca gaaggagcag tggctgcccg gcgtcgcgag
      781 cggtgacatc atcgcctcct tcgcgctcac cgagcccgac aatggctctg acgcagccgg
      841 tatccgcacc tcggcgcggc gcgacggcgg cgatttcgtg atcaacggca ccaagcgcta
      901 tatcaccaat gccgtgcgcg ccggtgtctt caccgtcttt gcgcgcaccg accccgacaa
      961 ggacggggcg gaaggtgttt cagccttcat cgttccggcg gacacccccg gcatcaccgt
     1021 cgccaagccc gaccgaaagc tcggtcagcg cggcaccaag acgtcggatg tcatctttga
     1081 caacgtgcga gttcccgaaa gcgcgatcct tggcggtccg gagcggttga atcaggggtt
     1141 ccgcaccgcg atgaaagtgc tcgatcgcgg ccgcatccac gtcggcgcca tggccgtggg
     1201 tcagagccag cggatgctcg acatcgccac tgactacgcg cttgagcgca agcagttcgg
     1261 taagccgatc ggcgaacacc aactggtgca gggcatgctg gcagattgtc aggccgaatt
     1321 gcacgccgcg cgcgcgctcg tccgcgcaac ggcagataag ttcgaccgcg agggcaaggc
     1381 gatcatcgaa gcctcctgca ccaagtattt ctgcaccgaa gccgcgggcc gcatcgccga
     1441 ccgcgcgctg cagatccatg gtggcgcggg gtacatggcc gaatatgata tcgagcggct
     1501 ctatcgcgat atccgtctgc tgcgcatcta cgagggcacg agccagatcc agcaattggt
     1561 catcgcgcga cgcacgctcg cgcagcgggc ggcctgagcc atggcggcgc agcagccccg
     1621 ccgccttgca gacatgccgg cgcagtcgaa gttctcggtc cttctgggga tcgagatcgt
     1681 cacctgcact ccgcaggagg tggtctgcac catggtggtg acagaggaca tgtcgaaccg
     1741 caacggagtg ctgcacggcg gcgcgctgat gaccctgtcg gacaccgcgg cggggacggc
     1801 ctcgttcatc agcagcccgg cggaaatttc caacacaacg gtggaggcaa agaccaattt
     1861 catccgcccg gtaaagctgg gcgacacggt gaccgcgcgc tgcgagccgg tccatgtggg
     1921 ccgggcgacc tcggtgctgc aggtcaccat gacgcggggc gacggcaagg tcgtcggcgt
     1981 cacgacccag acccacctgt ttctgggctg gaaggactaa gaggcatgaa aggggaagag
     2041 acatgaaaga catcgagaca ggggccgttg ggccgcaggc agcctatgag gcgtatctcg
     2101 ccgcgggacg cttcatgatt cagcgagctc agagcactgg cgaatatgtg ttctggccca
     2161 aggtcacatc gcccaacggc gccaccgatc tcgaatgggt cgaggccaag ggcaccggga
     2221 caatctatgc catcaccgtc aaccgcgccc ggaccgggtt ctggaacgtc gcgctggtcg
     2281 agcttgatga gggtgtccgc atgatgtcaa cgctgcccgg cgtcgagacc gccgagatcg
     2341 gcgcgcgggt caaggcccgc atcgaagaga ccgaagacgg cccgcgcgtg gtttttgatt
     2401 tggccaagga ggacgcggca tgagcgacag catgcgggga aaatccgcca tcgtcggcat
     2461 ggcaaccgct ggcgtcggtg aggcgccggg cttttctgca atggagcttc tggggcaggc
     2521 ggcggtcaag gcggtgaacg acgccgggct caagcttcag gacatcgacg gcgtcttcgc
     2581 cgccaccagc agccatgcct tcccgacaat gagcgtggtc gaataccttg ggctgaagcc
     2641 gaagttcttc gacggcacga acgtcggcgg ttcgagcttc gagatgcatc tgttgcaggc
     2701 gacgctggca ctggaggccg gtctctgcga cgcggcgctg gtgtgctacg ggtcgaacca
     2761 gcgtaccgct ggtggccgcc tcgtatcgat gagcgagccg caatggcacg aaacccctta
     2821 caagccgcgc catccgatca ccgcatacgc gctggcgacc agccgtcaca tggccgaata
     2881 tggcaccacc cgcgagcaac tggccgatgt ggcactcgcg gcgcgcggct gggccaacct
     2941 caatcccgag gcctttgcac
//
LOCUS       DTVW01000542            1929 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1649820, whole
            genome shotgun sequence.
ACCESSION   DTVW01000542 DTVW01000000
VERSION     DTVW01000542.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1929)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1929)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1929
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1649820"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1478)
                     /locus_tag="EYO87_07200"
     CDS             complement(<1..1478)
                     /locus_tag="EYO87_07200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005850532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNB domain-containing ribonuclease"
                     /protein_id="HIC65765.1"
                     /translation="MTQLPDKQQILDWVSDHPDANSKRDIAKAFGIKGAQRIELKRLL
                     KELEAEGQLERRRRHYLDAEKLPAVTVLELLAPDGSGDLFARPLEWRGEGPVPRILYT
                     PRQTDPALGRGERFLARLVEVHGEDHQYQARLMRRITAAPNRITGIFRKDTEGGRILP
                     IDKGQDKEWRIRADATQGAQNGELVQAEQVGPRARMGLPQARIIERLGDPSAPRSVSL
                     IAIHQHGIPDEFPEKVVEEAESQKPATMKGREDLRDLPLVTIDPSDARDHDDAVAAKI
                     EDDGGATIWVAIADVAHYVRPGSALDREAWTRGNSTYFPDRVVPMLPEALSADLCSLH
                     EGVDRPVIAVRMRLDAQGNKISHNFHRGMMNSRASLAYEQAQAGADGDPDQQTRPLMD
                     SVIKPLWHAYGLLRDARARRQPLDLDLPERRIELAPDGRVRSVNFRDRFDAHRLIEEF
                     MVLANVAAAEELTRRRRPLLFRVHEEPSLDKIDALREVAQASG"
     gene            complement(1515..1925)
                     /locus_tag="EYO87_07205"
     CDS             complement(1515..1925)
                     /locus_tag="EYO87_07205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010394006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HIC65766.1"
                     /translation="MEETRDLDRCRALRRKVFIEEQGVAEAEEWDGLDGQALHLLVWQ
                     DGTAIGTARILIKDGTGKIGRVCVLPEARGAGHGAALIRAAVTMLQARPGITRAMLGA
                     QTHAIGFYQKLGFSVCGPIYDDAGIPHRDMSRDL"
BASE COUNT          293 a          660 c          630 g          346 t
ORIGIN      
        1 ccggatgcct gcgccacctc gcgcagcgcg tcgatcttgt cgaggctggg ttcctcgtgc
       61 acgcggaaca gcagcggccg tcggcgccgg gtcagttcct cggccgcggc gacattggcc
      121 aggaccatga attcctcgat caggcgatgc gcatcgaagc ggtcgcggaa attcaccgat
      181 ctaacgcgac catccggggc cagctcgatc cgccgttcgg gcaggtccag atccagcggc
      241 tggcggcgcg cgcgcgcatc gcgcaacagg ccgtaggcat gccaaagcgg tttgatcacg
      301 ctgtccatca gcggtctggt ctgttgatcg ggatccccgt ccgcgcccgc ctgcgcctgt
      361 tcataggcca ggctcgcgcg gctgttcatc atcccgcgat gaaaattgtg gctgatcttg
      421 ttgccctggg catccagccg catcctgacc gcaatcaccg ggcggtccac gccttcgtgc
      481 agcgaacaca gatccgccga cagcgcctcg ggcagcatcg ggaccacgcg gtcgggaaaa
      541 taggtcgagt tgccgcgcgt ccatgcctcg cgatccagcg ccgagccggg ccggacgtaa
      601 tgggccacat cggcgatggc gacccagatc gtcgcgccgc cgtcatcctc gatcttggcc
      661 gccaccgcgt cgtcgtgatc gcgcgcatcc gacgggtcga tggtcacaag cggcaggtcg
      721 cgcagatcct cgcgcccctt catcgtggcg ggcttttgcg attcggcttc ctcgaccacc
      781 ttttcgggaa attcgtcggg aatcccgtgc tgatggatgg cgatgaggct gaccgaccgc
      841 ggggccgacg gatcgcccag ccgttcgatg atccgcgcct ggggcaggcc catccgcgcc
      901 ctgggcccga cctgttcggc ctgcaccagt tcgccgttct gcgcgccctg ggtggcgtcg
      961 gcgcggatcc gccattcctt gtcctggccc ttgtcgatgg gcagaatgcg gccgccctcg
     1021 gtgtccttgc ggaagatgcc ggtgatacgg ttgggtgcgg cggtgatgcg gcgcatcaga
     1081 cgggcctgat attgatgatc ctcgccgtgg acctcgacca gccgggccag gaaccgctcg
     1141 ccccgcccca gtgccgggtc ggtctggcgc ggcgtataca ggatcctggg cacgggcccc
     1201 tcgccgcgcc attccagcgg acgcgcgaac agatcacccg agccgtccgg ggccagcaat
     1261 tccagaacgg tcacggcagg cagcttttcg gcgtccagat agtgacggcg gcggcgttcc
     1321 agctggcctt cggcctccag ttccttcagc aggcgtttca gctcgatccg ctgcgcgccc
     1381 ttgatgccga aggctttcgc gatgtcgcgt ttggaattgg cgtcgggatg gtccgaaacc
     1441 caatccagga tctgctgctt gtcgggtagc tgggtcatga agatcgccct gtcaggatgg
     1501 cggaagaaac gcaatcacag atcgcggctc atgtcccggt gcgggatgcc ggcatcgtca
     1561 tagatgggac cgcaaaccga aaacccaagc ttctggtaaa agccgatggc atgggtctgt
     1621 gcccccagca tggctcgcgt gatgccgggg cgggcttgca gcatcgtgac cgccgcccgg
     1681 atcagcgccg cgccatggcc cgcgccgcgc gcctcgggca ggacacagac gcggccgatc
     1741 ttgccggtgc cgtccttgat caggatccgc gcggtgccga tggcggtgcc gtcctgccag
     1801 accagaagat gcagcgcctg cccgtccagc ccgtcccatt cctcggcctc cgcgacaccc
     1861 tgttcctcga tgaagacctt tcggcgcagg gcgcggcagc ggtccagatc gcgcgtctcc
     1921 tcgatcttc
//
LOCUS       DTVW01000543            1901 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1649930, whole
            genome shotgun sequence.
ACCESSION   DTVW01000543 DTVW01000000
VERSION     DTVW01000543.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1901)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1901)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1901
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1649930"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..328
                     /locus_tag="EYO87_07210"
     CDS             <1..328
                     /locus_tag="EYO87_07210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011749879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HIC65767.1"
                     /translation="AALAVGNWVLMVVSSFLLAAGAGLVIPLQTRLMDVAGRAQNMAA
                     AMNHAAFNAANALGPFLAGLALTAGWGWRAPGLVGIALTAAGAVVLMLALRQDRVSAA
                     VADCAG"
     gene            complement(246..1007)
                     /locus_tag="EYO87_07215"
     CDS             complement(246..1007)
                     /locus_tag="EYO87_07215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005851039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF599 domain-containing protein"
                     /protein_id="HIC65768.1"
                     /translation="MQFDMTFATRFDPADLAAVLALFAAWWGIGWMTERPPAGKPSVS
                     VLMTRFRREWMLHFLTREPRIFDGNILASLREGTAFFASACMIATGGILALIGNTDPL
                     RGLAREFDLDRGLTILWEVKLLVTMFFVVNAFLKFVWAHRLFGYCAIMMAAVPNDPAD
                     PAARDRAMQAADLNITAARSFNAGLRSVYFALGSLTWLAGPWALLAGVAVVLFVTWRR
                     EFASTSRQVILRNLPPPRRPGPVAKPASEPPHPQP"
     gene            1274..1726
                     /locus_tag="EYO87_07220"
     CDS             1274..1726
                     /locus_tag="EYO87_07220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017997788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20 family protein"
                     /protein_id="HIC65769.1"
                     /translation="MRNFDLTPLYRASVGFDRLADVMDRTLSADVAAPTYPPYNIEKT
                     GEDAYRISIAVAGFAADDLSVEVRDGAVIVSARKAEEDDGRSYLHRGIATRAFERKFT
                     LADHVRVDGASHADGMLHIDLVREVPEALKPRRIEIAKSAPKVEKLDA"
BASE COUNT          320 a          608 c          654 g          319 t
ORIGIN      
        1 cgccgcgctg gccgtgggaa actgggtgct gatggtcgtt tccagctttc tgctggcggc
       61 gggggcggga ctggtgatcc cgctgcagac gcggctgatg gacgtggcgg gccgggcgca
      121 gaacatggcc gcggcgatga accacgcggc gttcaacgcc gccaacgcgc ttgggccttt
      181 cctggccggt ctggcgctga ccgcaggatg gggctggcgc gcgcccggtc tggtgggaat
      241 cgcgcttacg gctgcgggtg cggtggttct gatgctggct ttgcgacagg accgggtctc
      301 cgcggcggtg gcagattgcg caggatgacc tgccgcgagg tcgaggcgaa ttcgcgccgc
      361 caggtcacga acagcacgac cgccacgccg gccagcagcg cccagggccc ggccagccag
      421 gtcagtgagc cgagggcgaa atagacgctg cgcagcccgg cattgaagct gcgggcggcg
      481 gtgatgttca ggtccgccgc ctgcatggcg cgatcccgcg ccgccggatc ggccggatcg
      541 ttgggcaccg ctgccatcat gatcgcgcaa tagccgaaca gccggtgcgc ccagacgaat
      601 ttcaggaagg cgttgacgac gaagaacatc gtcaccagca gcttgacctc ccacaggatg
      661 gtcaggccgc gatccagatc gaattcgcgg gccagaccac gcaacgggtc ggtattgccg
      721 atcagcgcca ggattccacc ggtcgcgatc atgcaggcgg atgcgaagaa ggccgtgccc
      781 tcgcgcaggc tggccaggat attgccgtcg aagatgcgtg gttccctggt caggaagtgc
      841 agcatccatt cgcgccggaa ccgcgtcatc agcaccgaga ccgagggctt gccggccggc
      901 ggtcgctcgg tcatccagcc gatgccccac caggcggcga acagagccag caccgccgcc
      961 agatcggcgg gatcgaaacg cgtggcgaag gtcatgtcga actgcatgag cctagtttag
     1021 gctgccgggt cgcgccttga aagccctgtt cgcacgccgc gccgatgcgg tatccggcag
     1081 gtcggcgcag gcggcgacag cacccggcaa acggcggcgg gcgcgggcct tcacgatcgg
     1141 ttgcgccggg tcttgaaggc tgctttcggt tccctagatc tattctgtcc ggcggccttg
     1201 aatggcgccg gcaggacgcc cgcccggaaa ccggggggcc ttagaccgca tcgcttatga
     1261 aaggatgtaa cccatgcgca attttgatct gaccccgctc tatcgtgcct cggtcggctt
     1321 tgaccgtctg gcggacgtga tggatagaac cctgtccgcc gatgtcgcgg ccccgaccta
     1381 tccgccctac aacatcgaga agaccggcga ggatgcctat cgaatctcga tcgctgtggc
     1441 gggttttgcc gccgatgatc tgtcggtcga ggttcgtgac ggcgccgtga tcgtctcggc
     1501 ccggaaggcc gaagaggatg acggccggtc ctatctgcac cgcggcatcg cgacccgcgc
     1561 gttcgagcgc aagttcaccc tggccgatca cgtccgtgtc gatggcgcca gccatgccga
     1621 cggaatgctg catatcgatt tggtccggga agtgcccgag gcgctgaaac cgcgccggat
     1681 cgagatcgcc aaatcggcgc ccaaggtcga gaagctcgac gcctgaccgc gccgaacccc
     1741 gcagcctgtc ttttccccga caggccgttc atgcccgccg cgctccgtcg gcgggcatga
     1801 tatcggcgat gggtgtccgg catctttgct aaagtggcgg aagcggtggg attcgaaccc
     1861 acggtgcggt ttcccgcacg ctggttttca agaccagagc c
//
LOCUS       DTVW01000544            1370 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1651872, whole
            genome shotgun sequence.
ACCESSION   DTVW01000544 DTVW01000000
VERSION     DTVW01000544.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1370)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1370)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1370
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1651872"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1293)
                     /gene="rseP"
                     /locus_tag="EYO87_07225"
     CDS             complement(<1..1293)
                     /gene="rseP"
                     /locus_tag="EYO87_07225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011750232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RIP metalloprotease RseP"
                     /protein_id="HIC65770.1"
                     /translation="MTDLIPLFGGTLWTLAAFVVALVVIVTVHEYGHYIIGRLSGIRA
                     EVFSVGFGPRLIARRDRHGTVWQVAAIPLGGYVRFLGDENAASAGSGSRVDPALRRQT
                     LSGAPLWARFSTLLAGPVFNFVLSILIFGGFALFQGLPADRVEVGAVSEVPPGVMNGL
                     RPGDRIVALGGQPVETWADLGQAAQDLPIAPQQDWTVIRDGAEVTVTGPDPMPARISG
                     VAPRGAAADAGLMAGDVVISIEGKPITRFTQMREAVEAAEGDPIQLQVWRSGQGTASY
                     TLIPRMQDLPSAGGGYERRWLIGVTGGGGFFEPAMRRAGPLESLWLGVMQTWGIIVSS
                     LAGLWAMISGQIGGCNLGGAISIAESTGQAASAGGASFLWWIAVLSAAIGFLNLLPIP
                     VLDGGHLMFYAWEALTGRPPSDRALNLLTAAGMAAVLAL"
BASE COUNT          246 a          520 c          430 g          174 t
ORIGIN      
        1 cagcgccagc accgccgcca tgcccgccgc cgtcagcagg ttcagcgccc ggtccgaggg
       61 tgggcgtccg gtgagggcct cccacgcata gaacatcagg tgcccgccat ccaggaccgg
      121 gatcggcagc aggttcagaa acccgatcgc cgccgacagg accgcgatcc accacaggaa
      181 actggcgccg ccggcgctgg ccgcctggcc ggtgctttcg gcgatgctga tcgcgccgcc
      241 cagattgcag ccgccgatct ggcccgagat catcgcccac agccccgcca gcgatgacac
      301 gatgatcccc caggtctgca tcacccccag ccacagcgat tccagcgggc ccgcgcgacg
      361 catcgctggt tcgaagaaac cgccgccacc ggtgacgccg atcaaccagc gccgttcgta
      421 tccgccgccc gcagagggca gatcctgcat ccgcggaatc agcgtatagc tggcggtgcc
      481 ctggccggac cgccagacct gcaactggat cggatcgccc tcggcagcct cgaccgcctc
      541 gcgcatctgg gtaaagcggg tgatcggctt gccctcgatg ctgatcacca cgtcaccggc
      601 catcagcccg gcatcggctg cggcgccgcg cggggcgacg ccgctgatcc gcgccggcat
      661 cggatccggg ccggtcaccg tcacctcggc gccgtcgcgg atcacggtcc agtcctgctg
      721 cggcgcgatg ggcaggtcct gcgccgcctg gcccagatcg gcccaggtct cgaccggctg
      781 gccacccagg gcgacgatgc ggtcgccggg gcgcaagccg ttcatcacgc ccggcggcac
      841 ctcgctgacg gcaccgacct cgacccgatc ggcaggcagg ccctgaaaca gcgcgaatcc
      901 gccgaagatc aggatcgaca ggacaaagtt gaagaccggt ccggccagaa gcgtcgaaaa
      961 ccgcgcccag agcggcgcac ccgacagcgt ctgccgccgc aaggccggat cgacccgcga
     1021 cccggaaccg gcgctggccg cattctcgtc gcccagaaag cggacatagc ctcccagcgg
     1081 aatcgccgcg acctgccaga cggtgccgtg acgatcccgg cgcgcgatca ggcgcggtcc
     1141 gaagccgacc gaaaagacct cggccctgat tcccgacagc cggccgatga tgtaatggcc
     1201 gtattcatgg accgtcacga tcaccaccag tgcgaccacg aaagccgcca gcgtccacaa
     1261 ggtgcccccg aataagggga tcagatcggt catgcggcgg cccttcctct tgcctcgcgg
     1321 tcccagtcga ggaccgtttc cagatcggcg gcatcatcgc cgaaaccggc
//
LOCUS       DTVW01000545            2468 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1652560, whole
            genome shotgun sequence.
ACCESSION   DTVW01000545 DTVW01000000
VERSION     DTVW01000545.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2468)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2468)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2468
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1652560"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..322)
                     /locus_tag="EYO87_07230"
     CDS             complement(<1..322)
                     /locus_tag="EYO87_07230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009813988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HIC65771.1"
                     /translation="MIRKPAADEVDVLVSGGGIAGLIAAAAFGAEGLSVLCVDPAPPV
                     TDAGASGADLRTTAFLAPSVDLLRRIGLWDRLAPHATPLQVMRIVDAGGARPEPRLIR
                     DFDAA"
     gene            complement(319..1044)
                     /locus_tag="EYO87_07235"
     CDS             complement(319..1044)
                     /locus_tag="EYO87_07235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011750176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine 5'-nucleotidase"
                     /protein_id="HIC65772.1"
                     /translation="MDFAEADIWIFDLDNTLYPPEMALFPQIEERMTEWVMRMLSVER
                     EAADRLRRDYWMRHGTTLAGLMAEHAIDPAAYLGHVHDIDFTGLVPAPGLARAIAALP
                     GRKIVHTNADSAYAARVLAARGLDVFEAVFGVEETHFHPKPDPRAYEAVIDMAGIDPA
                     RAVFFEDDPRNLRVPHRLGMRTVLVGPGRHGPNDSAPEAEIGNHVDHRIGDLEAFLCR
                     IVPGQPPGQNGGRDRNVRGRRCR"
     gene            1109..1735
                     /locus_tag="EYO87_07240"
     CDS             1109..1735
                     /locus_tag="EYO87_07240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011750177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HIC65773.1"
                     /translation="MKDAYSLILTAIEAGTYRPGDRLVESELAERFGVSRTPVREALQ
                     RLETQAMLVRDGRSLIVASLDHNQLAELYTVRAELEALAARLAARHATPEEVRVLAQM
                     LDEDQKCVRNPEALARANKRFHHQIHLASHNRYLVQQLDLVHRSMALMARTSLAAEGR
                     SETALVEHRRIVEAIAAGDGAAADSALRRHISMAWETRLKLEAQADHD"
     gene            1743..2030
                     /locus_tag="EYO87_07245"
     CDS             1743..2030
                     /locus_tag="EYO87_07245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008028026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65774.1"
                     /translation="MIMAEADPKNLIRESFRIEGIGIGECRSIFVDWALSLPPGVDAV
                     RAIRFLLDHYAPKAAPGDQPHPMVGVLVEGAQARAGGQPRRRGGRAARVPG"
     gene            2034..>2468
                     /locus_tag="EYO87_07250"
     CDS             2034..>2468
                     /locus_tag="EYO87_07250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011750178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65775.1"
                     /translation="MRLIETEADLALGAAHLAAVCPVWARVLPRLGPLPLRRSGDGFE
                     AIAQAITGQQISVAAAASIWARMQAAGLVAPEAIAAADDDALRATGLSRPKLRYLKGI
                     ANAGLDWQGLRTLSDDRAIAAGMAPETLWPPTYVPMPGHASRL"
BASE COUNT          395 a          848 c          867 g          358 t
ORIGIN      
        1 cggcggcatc gaaatcgcgg atcagccgcg gctcggggcg cgcgccgccc gcatccacga
       61 tccgcatgac ctgcaagggc gtcgcatggg gcgccagccg gtcccagagt ccgatccgcc
      121 gcagcagatc gaccgaaggg gccagaaagg cggtggtgcg cagatcggcc cccgaggcgc
      181 ctgcatccgt gaccggaggc gcgggatcga cgcacaggac cgacaagccc tcggcgccga
      241 acgcggccgc ggcgatcagc ccggcgattc cgccgcccga gacgaggaca tcgacctcat
      301 cggcggcagg tttcctgatc atcgacatcg gcggccccgg acattgcgat cccggccgcc
      361 attctgcccc ggcggctgcc cggggacaat ccggcacagg aacgcttcga ggtcgccgat
      421 ccggtgatcg acgtgattgc cgatctcggc ctcgggcgcg ctgtcgttcg gaccgtggcg
      481 ccccggcccg accagaaccg tccgcatccc cagccggtgc ggcacgcgca gattgcgcgg
      541 gtcgtcctcg aaaaagacgg cgcgggcggg gtcgatcccg gccatgtcga tcaccgcctc
      601 gtaggcgcgg ggatcgggct tggggtggaa atgcgtctcc tcgacgccaa agacagcctc
      661 gaagacgtcc agcccccgcg ccgccagaac cctggcggca taggcgctgt cggcattggt
      721 atggacgatc ttgcgccccg gaagggccgc gatggcgcgg gccagtccgg gcgcgggcac
      781 gaggccggtg aagtcgatgt catggacatg gcccagatag gcggcagggt cgatcgcatg
      841 ttcggccatc agtccggcca gcgtcgtgcc gtgccgcatc cagtaatcgc ggcgcagccg
      901 gtcggcggcc tcgcgttcga cggacagcat gcgcatgacc cattcggtca tccgctcctc
      961 gatctgcggg aacagcgcca tctcgggcgg atagagcgtg ttgtccagat cgaagatcca
     1021 gatatcggct tcggcgaaat ccatgaccct gcctagaccg gtatgctcgc gcttgcaatt
     1081 cgcgccggcg cggccaatcg tggcgcccat gaaggacgcc tattccctga tcctgacggc
     1141 catcgaggcc ggcacctatc gccccggcga ccggctggtc gaatccgaac tggccgagcg
     1201 gttcggcgtc agccgcaccc cggtccgcga ggccctgcaa cggctggaga cgcaggcaat
     1261 gctggtccgc gacggacgca gcctgatcgt cgcctcgctg gatcacaacc aactggccga
     1321 gctttacacc gtgcgcgccg aactggaggc gctggccgcg cgcctggccg cccgccacgc
     1381 cacccccgaa gaggtgcgcg ttctggcgca gatgctggac gaggatcaga aatgcgtccg
     1441 caaccccgag gcgctggctc gcgccaacaa gcggtttcac caccagattc atctggcctc
     1501 gcacaaccga tacctggtgc agcaactgga ccttgtccat cgcagcatgg cgctgatggc
     1561 gcgcacctcg ctggcagccg agggccgcag cgaaaccgcg ctggtcgaac atcgccggat
     1621 cgtcgaggca attgcggccg gcgatggcgc ggcggcggat tcggccctgc gcagacatat
     1681 ctcgatggcc tgggagacaa ggctgaaact ggaggcgcag gccgatcatg actgaacccc
     1741 cgctgatcat ggccgaggcc gatcccaaga acctgatccg cgaaagcttc cgcatcgagg
     1801 gaatcggaat tggcgaatgc cgatcgatct tcgtggactg ggccctgtcg ctgcctccgg
     1861 gcgtcgatgc ggtccgggcg atccggtttc tgctggatca ctacgcgccc aaggccgcgc
     1921 cgggcgatca gccccatccg atggtcggcg ttctggtcga gggcgcgcag gcgcgggccg
     1981 gggggcagcc ccggcggcgc ggaggtcggg cggcgcgggt tcccggctga gagatgcggc
     2041 tgatcgagac cgaggccgat ctggcccttg gcgcggccca tctggcggcg gtctgcccgg
     2101 tctgggcacg ggtgcttccg cggcttggcc cgctgccgct gcgccgcagc ggcgacggct
     2161 tcgaggccat tgcccaggcc attaccggtc agcagatttc ggtcgcggcc gctgcctcga
     2221 tctgggcgcg gatgcaggcg gcggggctgg tcgcgcccga ggccatcgcg gcggccgatg
     2281 acgatgccct gcgcgcaacc ggactgtcgc ggcccaagct gcgctacctg aaggggatcg
     2341 cgaacgcggg actggactgg caggggctgc gcacgctgtc cgatgacagg gccatcgcgg
     2401 ccgggatggc gccggagacc ttgtggccgc caacgtacgt gccgatgccc ggccacgcca
     2461 gcaggtta
//
LOCUS       DTVW01000546            3483 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1654710, whole
            genome shotgun sequence.
ACCESSION   DTVW01000546 DTVW01000000
VERSION     DTVW01000546.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3483)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3483)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3483
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1654710"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..815)
                     /locus_tag="EYO87_07255"
     CDS             complement(<1..815)
                     /locus_tag="EYO87_07255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_345191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HIC65776.1"
                     /translation="MDSYLVEILFGAFFGLLILGAPITVALGVSSLAAMLYLGDNPIK
                     MVQMAWSAVGSFPLMALPAFILAGALMEAAGLSRRLINVAESLAGPFTGGLSAATVMA
                     CLFFGAISGSGPATTAAVGMLMIPAMVRQGYGAGYAASVTAAAGGLGIIIPPSIPMVI
                     YGISAMGMQPPSAAIETYGAFQSVSISKLFIAGFLPGVVMAGGLLVMNYIRCRMRGFH
                     GSAEPLSVGKILSACYHGFWALLAPVVILGGIYSGFFTPTEAAIVAIFYTLFVG"
     gene            complement(815..1372)
                     /locus_tag="EYO87_07260"
     CDS             complement(815..1372)
                     /locus_tag="EYO87_07260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_345190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease"
                     /protein_id="HIC65777.1"
                     /translation="MPALWSFLDKFESHVCRILLAVFVTLLFAQIVARQLFGFSITWI
                     EELSVILFVWFAYFGASYAARMAAHNRVGFHLNALGREKARIVEAIGDLFWIAFNLVF
                     IWQSIEFISRLKPFVKAQTLGWEMRYVYLALPIAFTLMTLRILQVNYLKLVRGIDPAD
                     PDKVSVEAALELAEDEKRAYDKGHR"
     gene            complement(1460..2464)
                     /locus_tag="EYO87_07265"
     CDS             complement(1460..2464)
                     /locus_tag="EYO87_07265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013960746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HIC65778.1"
                     /translation="MSYMTRFLTGTALTLALAVPAAAKEYRIAVGDGAGGSQEALGKA
                     FVAALEEQTGGEMTGKLFLNGQLGDEQDTVTAAATGTLDFSILAINNITPFSPSVGTL
                     TLPYVILSQDDAEKITQGEVGQQMIDQTIEDAGVRIIGWGYSGFRVLSNSKRPVSTVA
                     DLQGLVIRVPKNEIMIETYKSWGLNPTPMAWGETFAALQQKVVDGQDNPYLTIYAMKF
                     DEVQKYITDLRYLFSIEPLIVSEALFESLSEDQQQQVLAAGKAATQASSEFLRSEESK
                     IRDELVSRGMEITQPADDEKEFRDLATAAVWPQFYDQIGGKEVLDNVLTSLGREPAPQ
                     "
     gene            2577..>3483
                     /locus_tag="EYO87_07270"
     CDS             2577..>3483
                     /locus_tag="EYO87_07270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_345188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent aminotransferase family protein"
                     /protein_id="HIC65779.1"
                     /translation="MHSRIAPEVIFLRDSDAPTRQGQLAAAIVRAVLESRARPGTRLP
                     SSRSLAGALGLSRMTVTLVYQDLVSQGYLETIPRSGIAVAATVPHRRLRAQGARRTEE
                     PPDWGHWLSDHHLPRRMIRKPANWRDFRYPFIYGQADPALFDHNAWRDCARRALGTRD
                     FAELAADRYGADDPLLVDYIRSNTLPRRGITAGPDEVLVTLGAQNALFLAVELLARAD
                     RLAVTEEPGYPDFAETLRRAQSPTTFLPVDDRGLRPGDLPGNTRLVIATPSHHIPTGA
                     TMPLSRRRELIARAGQRDFLIIEDDY"
BASE COUNT          630 a         1135 c         1157 g          561 t
ORIGIN      
        1 ccgacgaaca aggtgtagaa gatcgccacg atggcggcct cggtcggggt gaagaagccg
       61 gaatagatgc cgcccaggat caccaccggg gccagcagcg cccagaagcc gtgatagcag
      121 gccgacagga tcttgccgac cgaaagcggc tcggccgagc cgtggaagcc gcgcatccgg
      181 cagcggatgt agttcatcac cagcaggccg ccggccatga cgacacccgg caggaaaccc
      241 gcgatgaaca gcttcgagat cgagaccgac tggaacgcgc cataggtttc gatcgccgcg
      301 gagggcggct gcatgcccat ggccgagatg ccgtagatga ccatcgggat cgagggcggg
      361 atgatgatgc caagcccgcc cgccgcggcc gtgaccgaag ccgcgtagcc cgcgccatag
      421 ccctgccgca ccatggccgg gatcatcagc atcccgacgg ccgcggtcgt cgccggcccc
      481 gagcccgaga tcgcgccgaa gaacaggcag gccatcacgg tggcggcgga caatccgccg
      541 gtgaacggac cggccaggct ttcggccacg ttgatcaggc gccgcgacag gcccgcagcc
      601 tccatcagcg cgccggcgag gatgaaggcg ggcagggcca tcagcggaaa ggatccgacc
      661 gcggaccagg ccatctgcac catcttgatc ggattgtcgc ccagatacag catcgccgcc
      721 agcgacgaga cgccaagcgc cacggtgatc ggcgcgccaa ggatcagcag cccgaagaag
      781 gcgccgaaga ggatttcgac cagatagctg tccatcagcg gtgacccttg tcataggcgc
      841 gcttctcgtc ctcggccagt tccagcgccg cctcgacgct gaccttgtcg ggatcggcgg
      901 ggtcgatgcc gcgcaccagc ttgaggtagt tcacctggag gatgcgcagc gtcatcaggg
      961 tgaaggcgat gggcagggcc agatagacat agcgcatctc ccatcccagg gtctgggcct
     1021 tcacgaaggg tttcaggcgg ctgatgaatt cgatcgactg ccagatgaag accaggttga
     1081 aggcgatcca gaacagatcg ccgatcgcct cgacgatgcg cgccttctcg cggcccaatg
     1141 cgttcaggtg aaagcccacg cggttatgcg cggccatccg ggcggcgtag gacgcgccga
     1201 aataggcgaa ccagacgaac aggatcaccg acaattcctc gatccaggtg atcgagaagc
     1261 cgaacaattg ccgggcgacg atctgcgcga aaagcagcgt cacgaagacg gccagcagga
     1321 tgcggcagac atggctttcg aacttgtcga gaaaggacca gagtgctggc atggcggtgc
     1381 ctttggctga cgggcgcgcc gggacgcgga cggggacggg aacgaggcgc gcgggccaga
     1441 gcccgcgcgc ggtggcgcat cactggggcg cgggttcgcg gcccagcgag gtcaggacgt
     1501 tgtccagaac ctccttgccg ccgatctggt catagaattg cggccagacc gcggcagtcg
     1561 caagatcgcg gaactccttc tcgtcgtcgg ccggctgggt gatctccatg ccgcggctga
     1621 ccaactcgtc gcggatcttg gattcctcgc tgcgcagaaa ttcggacgat gcctgcgtcg
     1681 cggccttgcc ggcggcaaga acctgctgct gctgatcctc cgacaggctt tcgaacaggg
     1741 cctcgctgac gatcagcggc tcgatcgaga acaggtagcg caggtcggtg atgtatttct
     1801 ggacctcgtc gaacttcatc gcgtagatcg tcagataggg gttgtcctgc ccgtccacga
     1861 ccttctgctg aagcgcggcg aaggtttcgc cccaggccat cggcgtcgga ttgaggcccc
     1921 agctcttgta ggtctcgatc atgatctcgt tcttcgggac gcggatcacc agcccctgca
     1981 gatccgcgac cgtcgaaacc ggccgcttgg aattgctgag cacgcgaaag ccggaatagc
     2041 cccagccgat gatgcgcacg ccggcatcct cgatcgtctg gtcgatcatc tgctggccga
     2101 cctcgccctg cgtgatcttt tcggcgtcgt cctggctgag aatgacatag ggcagcgtca
     2161 gcgtgccgac cgagggcgag aacggcgtga tgttgttgat ggcgaggatc gagaaatcca
     2221 gcgttccggt ggcggcggcg gtcacggtgt cctgttcgtc gccaagctgg ccgttcagga
     2281 acagcttgcc ggtcatctcg ccgccggtct gttcttccag cgcggcgacg aacgccttgc
     2341 caagcgcctc ctgcgatccg ccggcgccat cgcccacggc gatgcggtat tccttggccg
     2401 cggctggaac ggcaagtgcc agcgtcagcg cggtgccggt cagaaaacgg gtcatgtagc
     2461 tcatcggttg atccctgttg ctggggccgc gttggtcgcg gcgtgtttgg tgcggcataa
     2521 tgttgcaggc cggttgccgc aaggatatgt ccagatggaa ccgtctctag gtccagatgc
     2581 acagccggat tgcgcccgag gtcatctttc tgcgcgacag cgacgcgccg acgcggcagg
     2641 gccagcttgc cgcggccatc gtgcgcgcgg tgctggaaag ccgggcccgg cccggaacac
     2701 gcctgccctc cagccgcagc ctggccgggg cgcttggcct gtcgcggatg acggtcacgc
     2761 tggtctatca ggatcttgtc agccagggct atctggagac gatcccgaga tcgggcatcg
     2821 ccgtcgccgc aaccgtgccg cacaggcgcc ttcgcgcgca aggtgccaga cggaccgaag
     2881 aaccgcccga ttggggacac tggctttccg accaccacct gccgcgccgg atgatccgga
     2941 aacccgcgaa ctggcgcgat ttccgctatc ccttcatcta cggtcaggcc gacccggccc
     3001 tgttcgatca caacgcctgg cgcgattgcg cgcgccgcgc gcttggcacc cgcgatttcg
     3061 cggaactggc cgccgaccgc tatggcgccg acgatccgct gctggtcgat tacatccggt
     3121 ccaataccct gccccggcgg gggatcaccg cggggccgga cgaggttctg gtgacgctgg
     3181 gggcgcagaa cgcgctgttt ctggcggtgg aactgctggc ccgcgccgac cgtctggccg
     3241 tgaccgagga gcccggctac cccgatttcg ccgaaaccct gcgccgggcg caaagcccca
     3301 cgaccttcct gcccgttgac gacaggggat tgcggcccgg cgatctgccc ggcaataccc
     3361 ggctggtcat cgccacgccc agccaccaca ttccgaccgg cgcaaccatg cccctgtcgc
     3421 ggcgtcgcga gttgatcgcg agggccgggc aacgggattt cctgatcatc gaggacgact
     3481 acg
//
LOCUS       DTVW01000547            1314 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1656819, whole
            genome shotgun sequence.
ACCESSION   DTVW01000547 DTVW01000000
VERSION     DTVW01000547.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1314)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1314)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1314
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1656819"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1168
                     /gene="glcF"
                     /locus_tag="EYO87_07275"
     CDS             <1..1168
                     /gene="glcF"
                     /locus_tag="EYO87_07275"
                     /EC_number="1.1.99.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011750623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycolate oxidase subunit GlcF"
                     /protein_id="HIC65780.1"
                     /translation="DELDSPRGRIYLIKDMLENGKVPDARTVLHIDRCLSCLSCMTTC
                     PSGVHYMHLVDHARAYIEQTYRRPWSDRALRWILSRILPYPGRFRLALLGARIARPFR
                     RLVPDARLRAMLDMAPSEIPPPSRNDEPQVFPADGPRRRRVALLTGCAQRALNTDIND
                     ATIRLLRRHGCEVVIPRGIGCCGALTHHMGRTGESHAAAAANIAALTAEIEGEGLDAV
                     VINTSGCGTTVKDYGHMFRNDALAGDAARVAGLARDITEVMTELGLRDATRAAPLRVA
                     YHAACSLQHGQQIRSAPKDLLAAAGFTVLEPKDSHICCGSAGTYNLMQPAISAQLKER
                     KVATLKALSPQVISAGNIGCMMQIGGEAGVPVVHTVQLLDWATGGPRPRGLPII"
BASE COUNT          199 a          450 c          456 g          209 t
ORIGIN      
        1 cgatgagctc gacagcccgc gcgggcgcat ctacctgatc aaggacatgc tggaaaacgg
       61 caaggtgccc gatgccagaa ccgttctgca catcgaccgc tgcctgtcct gcctgtcctg
      121 catgaccacc tgtccctcgg gcgtgcatta catgcatctg gtcgatcatg cgcgcgccta
      181 tatcgaacag acctatcgcc gtccctggtc cgatcgggcg ctgcgctgga tcctgtcgcg
      241 gatcctgccc tatccggggc gcttccggct ggccctgctg ggcgccagga tcgcgcgccc
      301 gttccggcgg ctggttcccg atgcgcgcct gcgcgcgatg ctggacatgg cgccgtccga
      361 gattcccccg cccagccgca acgacgagcc gcaggtcttc ccggcggatg gcccgcgccg
      421 ccggcgcgtc gccctgctga ccggctgcgc gcagcgggcg ctgaacacgg atatcaacga
      481 cgccacgatc cggctgctgc gccggcatgg ctgcgaggtg gtgatcccgc gcggcatcgg
      541 ctgttgcggg gcgctgaccc atcacatggg caggaccggc gaaagccatg ccgcggccgc
      601 ggccaatatc gccgcgctga cagccgagat cgagggcgag ggtctggacg ccgtggtcat
      661 caacacctcg ggctgcggaa ccacggtgaa ggattacggt cacatgttcc gcaacgacgc
      721 gctggccggg gatgcggccc gcgtggccgg cctggccagg gacatcaccg aggtgatgac
      781 cgaacttggc ctgcgtgacg ccacccgcgc cgcgccgctg cgcgtggcct atcacgcggc
      841 ctgttcgctg caacacggcc aacagattcg cagcgcgccc aaggatctgc tggcggcggc
      901 cggctttacc gtgctggagc cgaaggattc gcatatctgc tgcggttcgg ccggaaccta
      961 caacctgatg cagcccgcca tctcggcgca gttgaaggaa cgcaaggtcg cgacgctgaa
     1021 ggcgctgtcg ccgcaggtca tcagcgcggg caatatcggc tgcatgatgc agatcggcgg
     1081 cgaggccggc gttccggtcg tccataccgt gcaattgctg gactgggcca ccgggggccc
     1141 gcgcccgcgt gggctgccga tcatctaggg gcaacgattg cccggaccgg gccgcgctcg
     1201 gatctcgatc aggggccgga tggcgcggat cgtgtctgcc cgtgcccggt cgtccagcgg
     1261 caggatcggg cgcggcggct gggcatcggt gagcccgaga tgattggcga tggc
//
LOCUS       DTVW01000548            1515 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1657356, whole
            genome shotgun sequence.
ACCESSION   DTVW01000548 DTVW01000000
VERSION     DTVW01000548.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1515)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1515)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1515
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1657356"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..296
                     /locus_tag="EYO87_07280"
     CDS             <1..296
                     /locus_tag="EYO87_07280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010392501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HIC65781.1"
                     /translation="GDISEIEVARAKAQLRAGLLMGLESPSAQAERIARVLAIWGRVL
                     DPSEVAQRISDVTLGDVRAHAERLIGRARPALALYGPVKTAPSRGVLAERLAA"
     gene            296..877
                     /locus_tag="EYO87_07285"
     CDS             296..877
                     /locus_tag="EYO87_07285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010392499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HIC65782.1"
                     /translation="MFSRRRPVRLETERIVLRLPAHSDFSAWTALRVDSRAFLTPWEP
                     VWSSDHLTRKSFTNRVYWAARASHGGSALPLFLLRRDGVLLGAITLDNIRRGPAQTGT
                     IGYWIGRPFARQGYMREAIGALVHHAFTALDLSRVEAACLPENAASRGVLEKSGFKYE
                     GVAQSYLQINGRWRNHVLYANLRSDRRGRSEAR"
     gene            953..>1515
                     /locus_tag="EYO87_07290"
     CDS             953..>1515
                     /locus_tag="EYO87_07290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008883691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HIC65783.1"
                     /translation="MGLEPADERLAAILPRDVLREVTPAYLEEPRGRFHGKAGLVAAP
                     RDAEEAAAVIRACARARVAVVPRGGGTGLVGGQIMAGGPAPLILSLERMNAIRAVFSD
                     EAVMIAEAGATLQQARDAAAEAGRQFPLSLASQGTAQIGGVLSTNAGGVNVLRYGNAR
                     ALCLGIEAVLPSGVVMRDLKRLRKDNTG"
BASE COUNT          214 a          478 c          574 g          249 t
ORIGIN      
        1 ccggcgacat cagcgagatc gaggtcgccc gcgccaaggc gcaattgcgt gcgggcctgc
       61 tgatggggct ggaaagcccc tcggcgcaag cggaacggat cgcgcgggtt ctggcgatct
      121 ggggtcgggt tctggacccg tccgaggtag cgcagcggat ttccgacgtg acgctgggcg
      181 atgtgcgcgc ccatgccgaa aggctgatcg ggcgggcgcg gcctgcgctg gcgctttatg
      241 gtcctgtcaa gaccgctccg tcgcgcgggg ttctggccga aaggcttgcc gcctgatgtt
      301 ttcgcggcgg cgtcccgtgc ggctggaaac cgagcggatc gtgctgcgcc tgccggccca
      361 ttcggacttc agcgcctgga cggcgctgcg ggtcgacagc cgcgctttcc tgaccccctg
      421 ggagccggtc tggtcatccg accatctgac ccgcaagagc ttcaccaacc gcgtctactg
      481 ggccgcccgg gccagtcacg gcggcagcgc gctgccattg tttttgctgc gccgcgacgg
      541 cgtgctgctg ggcgcgatca cgctggacaa tatccggcgc ggtcccgccc agaccggcac
      601 gatcggctac tggatcggcc ggccctttgc gcggcagggc tatatgcgcg aggcgatcgg
      661 cgcgctggtg catcatgcct tcaccgcgct ggacctgagc cgggtcgagg ccgcctgcct
      721 gcccgagaac gctgcctccc ggggcgttct ggagaaatcg ggtttcaagt atgagggcgt
      781 ggcgcaaagc tatcttcaga tcaatgggcg ctggcggaac catgtgcttt acgccaatct
      841 gcgcagcgac aggcgggggc gcagcgaggc gcgctgattt tgcgtcccgc gacggccggt
      901 ggggccagcc cccccggacc ccccccgagg tatttggaaa gagggcgaga agatggggct
      961 ggaaccggcg gacgagcggc tggcggcgat cttgccgagg gatgtgctgc gcgaggtgac
     1021 gccggcctat ctggaagagc cgcgcggccg gtttcacggg aaggccgggc ttgtcgcggc
     1081 gccgcgcgat gccgaagagg cggcggcggt gatccgggcc tgtgccaggg cgcgcgtggc
     1141 tgtggtgcct cgcggcggcg ggaccgggct ggtcggcggg cagatcatgg ccggggggcc
     1201 tgcgcccctg atcctgtcac tggaacgaat gaatgccatt cgcgcggtct tttccgacga
     1261 ggcggtgatg atcgccgaag ccggcgcgac cctgcaacag gcccgcgatg ccgccgccga
     1321 ggcgggccgg caatttccgc tgtcgctggc ctcgcagggg acggcgcaga tcggtggagt
     1381 gctttccacc aatgccggag gcgtgaacgt gctgcgctat ggcaatgcgc gcgccctgtg
     1441 cctggggatc gaggcggtgt tgccatcggg cgtggtgatg cgcgacctga aacggctgcg
     1501 caaggacaat accgg
//
LOCUS       DTVW01000549            1290 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1657679, whole
            genome shotgun sequence.
ACCESSION   DTVW01000549 DTVW01000000
VERSION     DTVW01000549.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1290)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1290)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1290
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1657679"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..557)
                     /locus_tag="EYO87_07295"
     CDS             complement(<1..557)
                     /locus_tag="EYO87_07295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018387199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HIC65784.1"
                     /translation="MGYMLVGMFGLALLNVPIAVALGIVAILAIVIVQGADMLPNLAL
                     TMFEGASSFPLLAIPLFVLAGSIMNASSISRRLIALASALVGFVRGGLSFVVIGASMF
                     FAEISGSAVAGVAALGSILIPAMRKKGYSKEFSAAICSSASSLAIILPPSIPMILYAV
                     MAQQSVVKMFIAGFGPGIVGAICLAV"
     gene            complement(563..1153)
                     /locus_tag="EYO87_07300"
     CDS             complement(563..1153)
                     /locus_tag="EYO87_07300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008887436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease"
                     /protein_id="HIC65785.1"
                     /translation="MTSFTLRRGFETLLEVITALIVAALTALIVAGTAFRYFGSALSW
                     YDEVASIGLVWMTYFGSALAALKGAHIGFPGLVNAMPVRWRVAATIFSEICVFGFFGL
                     LAYAGWQVLMILEGMTLVSLPNVSVQLTQSIIPLGAVLFMIAEAVRLPELMRDARGGG
                     FVDHEIREALGDISNTPLEQDDASVPSRAHAHRGER"
BASE COUNT          281 a          424 c          407 g          178 t
ORIGIN      
        1 acggccaggc agatcgcgcc gacgatgccg gggccgaagc ccgcgatgaa catcttgacg
       61 accgattgct gcgccatcac cgcatagagg atcatcggaa tggacggcgg caggatgatc
      121 gcaaggctgg aggccgacga acagatcgcc gccgagaatt ccttggaata tcccttcttg
      181 cgcatcgcgg ggatcaggat cgagccaagc gccgcaacac ccgccacggc cgagccggaa
      241 atctcggcaa agaacatgga cgccccgatg acgacaaagg acagcccgcc ccgcacgaag
      301 ccgaccagcg ccgaggccag cgcgatcagg cggcgcgaga tcgaagaggc attcatgatc
      361 gaccctgcca gcacgaacag cggaatggcc agcagcggaa agctggaggc gccctcgaac
      421 atggtcaggg caaggttggg cagcatgtcc gcgccctgca cgatgacgat ggccaggatg
      481 gcgacgatgc caagcgccac cgcgatgggc acgttcagca gcgccagacc gaacattccc
      541 acaagcatgt atccgatggt catcagcgtt ctccgcgatg ggcgtgggca cgggacggca
      601 cgctggcatc gtcctgttcc agcggcgtgt tcgagatgtc gccaagcgcc tccctgatct
      661 cgtgatcgac aaagcccccg ccccgcgcgt cgcgcatcag ttcgggcagg cgcaccgcct
      721 cggcgatcat gaacagcacc gcgcccagcg ggatgatgga ttgcgtcagc tggaccgaga
      781 cattcggcag cgagaccagc gtcatgccct cgaggatcat cagaacctgc cagccggcat
      841 aggccagaag cccgaagaag ccgaagacgc agatttccga aaagatcgtc gcggcgaccc
      901 gccagcggac cggcatcgcg ttgaccagtc cgggaaagcc gatatgggcg cccttcagcg
      961 ccgccagcgc gctgccgaaa taggtcatcc agaccagtcc gatcgaggcg acctcgtcat
     1021 accagctgag cgccgatccg aaatagcgaa aggccgttcc cgccacgatc agggccgtca
     1081 gggccgccac gatcagcgcg gtgatgacct cgagcagggt ctcgaaaccc cgccgaagcg
     1141 tgaacgaagt catgaaaatc tccccggaat gtcggatcgg gcgggccgga tgttccgtcc
     1201 ggcccgccct cgcggccctt attgggcggc cagatcctgc gccttcttga tcagttcggc
     1261 ggcgccatcg accgattggg agaattcgtc
//
LOCUS       DTVW01000550            1109 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1663481, whole
            genome shotgun sequence.
ACCESSION   DTVW01000550 DTVW01000000
VERSION     DTVW01000550.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1109)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1109)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1109
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1663481"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1109)
                     /locus_tag="EYO87_07305"
     CDS             complement(<1..>1109)
                     /locus_tag="EYO87_07305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005851803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tricarboxylate transporter"
                     /protein_id="HIC65786.1"
                     /translation="VVAGLALLLPFMYGMEPVSGLALMIGLIAVIPTSDTFSSVLLGI
                     PGSSASQATVLDGFPLAKQGHAARALSAAFASSLFGGLCGAIVLTFFILIARPLILAF
                     GLPEMLMITILGLSMVAILAGRVPLKGVVAAGLGLMFGTIGAAPAGGSLRMSTYDLPY
                     LVDGFQLVIVGLGIYAVPEIVSLLRQDRAIAEGGTLGDGWTQGVRDWWTHRWLSLRCA
                     VIGVIVGVIPGLGGSVVDWLAYGSAVQTAKDKSQFGQGDIRGVIAPESSNNAKEGGGL
                     VPTLIFGIPGSGSMAIFLGGLALLNMTPGPQMVRNNLDITYTIVWSLALANVIGAGLC
                     ILLSKWIARMTTIRFTIIAPYLFTIIAFAAFQSRQS"
BASE COUNT          229 a          378 c          352 g          150 t
ORIGIN      
        1 gactgacgcg actggaaagc cgcgaaggcg atgatcgtga acagataggg cgcgatgatg
       61 gtaaagcgga tcgtcgtcat ccgcgcgatc catttggaca gcaggatgca cagccccgcg
      121 ccgatcacgt tggccagcgc cagcgaccag acgatggtgt aggtgatgtc cagattgttg
      181 cgcaccatct gcggtcccgg cgtcatgttc agcagcgcca gaccgccaag aaagatcgcc
      241 atcgaccccg atccggggat gccgaagatc agcgtgggca ccagcccgcc gccctctttc
      301 gcgttgttcg agctttcggg cgcgatcacc ccgcgaatgt cgccctggcc gaactgcgac
      361 ttgtcttttg ccgtctgcac ggccgatccg taggccagcc agtccaccac ggatccgccc
      421 agaccgggaa tgacacccac gatcacgccg atcaccgcgc agcgcagcga cagccagcga
      481 tgggtccacc agtcgcgcac gccctgcgtc cagccgtcgc ccagcgtccc gccctcggcg
      541 atggccctgt cctgccgcag aagcgagacg atctcgggca ccgcatagat gccaaggccc
      601 acgatcacca gttggaagcc atcgaccaga tagggcaggt cataggtgga catgcgcagg
      661 ctgccgccgg ctggggcggc gccgatggtg ccgaacatca gccccagccc ggccgcgacc
      721 acacctttca gcggcacacg accggcaagg atcgcgacca tcgacaggcc gaggatcgtg
      781 atcatcagca tttcgggcag gccgaatgca aggatcagcg gccgggcgat caggatgaag
      841 aaggtcagca cgatcgcgcc gcacagaccg ccgaacagcg acgaggcgaa ggccgccgac
      901 agcgcgcgcg cggcgtgacc ctgtttggcc aggggaaagc cgtccagcac cgtcgcctgg
      961 ctggcggatg atcccggtat gcccagaagc acggacgaga acgtgtccga ggtcggaatg
     1021 accgcgatca gcccgatcat cagcgccagc cccgagaccg gttccatccc gtacatgaag
     1081 ggcagcagca gcgcgagccc ggcgactac
//
LOCUS       DTVW01000551            1605 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1667843, whole
            genome shotgun sequence.
ACCESSION   DTVW01000551 DTVW01000000
VERSION     DTVW01000551.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1605)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1605)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1605
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1667843"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..274)
                     /locus_tag="EYO87_07310"
     CDS             complement(<1..274)
                     /locus_tag="EYO87_07310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011750646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent protein deacylase"
                     /protein_id="HIC65787.1"
                     /translation="MRITVLTGAGISAESGLATFRAGTGLWERHRIEDVATPGGFARD
                     PALVHRFYNERRQKAAGAQPNAAHRALARLSRNHDVTLVTQNVDDLH"
     gene            complement(278..580)
                     /locus_tag="EYO87_07315"
     CDS             complement(278..580)
                     /locus_tag="EYO87_07315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011750645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65788.1"
                     /translation="MLNRIAIAASAVMMTAPLAMSGPIDSACVRSDRARGNAPLCGCI
                     QQVADQTLSRSDQRRAAAFFRDPNQAQAVRMSKRDADNAFWARYKRFAGRAEALCR"
     gene            844..1539
                     /locus_tag="EYO87_07320"
     CDS             844..1539
                     /locus_tag="EYO87_07320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009450237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HIC65789.1"
                     /translation="MIEAIGLDADDTLWENETFFRVTEAEFASLLADHAEIDDIAGRL
                     YEVECANLERYGFGIKGFVLSMVQTAIELTDGRIDGQAIGRILELGRDMLAHPVELIE
                     GVEAALDALSGRRLVLITKGDLIDQERKIAASGLAGRFAAIEILAEKTPAAYARVLDR
                     LGIASGGFVMAGNSMKSDVLPVISLGGHGVFIPHQMTWAAEHADPGPDPRLHHLDRIA
                     DLPDLITQIEAVP"
BASE COUNT          279 a          493 c          532 g          301 t
ORIGIN      
        1 cgtgcagatc gtccacattc tgcgtcacca atgtcacgtc atggttccgc gacagccggg
       61 ccagggcccg atgggcagca ttgggctgcg cgccggctgc cttctgccgt cgttcattgt
      121 agaagcgatg gaccagcgcc gggtcgcggg caaaaccccc cggtgtcgcc acatcctcga
      181 tccggtgccg ttcccacaat cccgtgccgg cgcgaaaggt ggccaggccg ctttcagcgg
      241 aaatgcccgc gccggtcagg accgtgatcc gcatgcgtca gcggcaaagg gcctcggccc
      301 tgccggcgaa acgcttgtag cgcgcccaga acgcgttgtc ggcatcgcgt ttcgacatcc
      361 gcacggcctg cgcctgattc ggatcgcgga agaacgcggc cgcgcggcgc tggtctgaac
      421 gcgacagggt ctggtccgcg acctgctgga tgcagccgca aagcggcgcg ttgccgcggg
      481 cgcggtcgga tcgcacacag gcgctgtcga tagggccgga catggcaagc ggcgctgtca
      541 tcatcacggc ggatgccgcg atcgcgatgc ggttgagcat ggaactgtct cctcggtttc
      601 ctgatcctca tgaaagcggg catggccggt ttttcccgat ctggaatgcc ctttctgcac
      661 caccagacat agcaaaaagc tcattcgggc tcaatcaccg ggacgtgagg aattgttgcg
      721 ctgacagcgc ggcctcatca atatcttgtg tcgtggtccc gatccggagc gaccggacaa
      781 ttcgctgcgg tttgactttg cgcgcgctgc atggttccgc tgcgctgccg gacggaggat
      841 gacatgatcg aggcaatcgg gctggatgcg gatgatacgc tatgggagaa cgagaccttc
      901 tttcgcgtca ccgaggccga attcgcatcg cttctggcgg atcatgccga gatcgacgac
      961 atcgcgggca ggctctatga ggtcgaatgc gcgaatcttg aacgatatgg tttcggcatc
     1021 aagggcttcg tgctgtcgat ggtgcagacc gcgatcgaac tgaccgacgg gcggatcgac
     1081 ggccaggcca tcggtcgcat ccttgaactg ggacgggaca tgctggccca tccggtcgag
     1141 ctgatcgagg gagtcgaggc tgcgctggac gcgctgtcgg ggcggcgcct ggtgctgatc
     1201 accaaggggg atctgatcga tcaggaacgc aagatcgccg cctcgggcct tgccggacgt
     1261 ttcgcggcga tcgagattct ggccgaaaag acgcccgcgg cctatgcccg cgtcctggac
     1321 cgtctcggca tcgcctcggg cggtttcgtg atggcgggca attcgatgaa aagcgatgtc
     1381 ctgccggtga tttcactggg cggacatggc gtcttcattc cacaccagat gacctgggcc
     1441 gccgaacatg ccgacccggg cccggatccg cgcctgcatc atctggacag aatcgcggat
     1501 ctgcctgacc tgatcacgca gatcgaggcc gtgccatgag cgtcaatgcc cgggcggccc
     1561 tgctgatgac gctgacgatg gcgggctttg ccttcgagga cgcgc
//
LOCUS       DTVW01000552            1214 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1668236, whole
            genome shotgun sequence.
ACCESSION   DTVW01000552 DTVW01000000
VERSION     DTVW01000552.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1214)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1214)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1214
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1668236"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..499
                     /locus_tag="EYO87_07325"
     CDS             <1..499
                     /locus_tag="EYO87_07325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="30S ribosomal protein S12 methylthiotransferase
                     RimO"
                     /protein_id="HIC65790.1"
                     /translation="RPAAAAKTLDEVAAWRAICPQITLRSTFIVGYPGETETEFQTLL
                     DWLDEARLDRVGCFQYENVKGARANDLPDHVAPEIKQDRFERFMQKAQAISEAKLAAK
                     IGQRVQVIVDQVDADGATCRTKADAPEIDGNLFIDQGFEALSPGDIVTVTVDEAGEYD
                     LWGHM"
     gene            496..1107
                     /locus_tag="EYO87_07330"
     CDS             496..1107
                     /locus_tag="EYO87_07330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005862479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease"
                     /protein_id="HIC65791.1"
                     /translation="MSLRNRLPAFISDHYEVHEWRHASAILAHDFPDEWRDIVDVLTA
                     FRLRREWIEVGGGNKSRVSAFIDGALARRGWSERQFRTGIVVDDSLTESPTHKVDCFK
                     NGIGLEIEWNNKDPFYDRDLNNFRLLFDLRALSVGVIVTRSDALQRIFRTLGRGSSYG
                     ESTTHMSKLLPRIEGGGGAGCPLLVFGITEALYVEGRGDEQRE"
     gene            1091..>1214
                     /locus_tag="EYO87_07335"
     CDS             1091..>1214
                     /locus_tag="EYO87_07335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014804606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-adenosylmethionine-binding protein"
                     /protein_id="HIC65792.1"
                     /translation="MNSASDDLLAAAGSTRFGTILADPPWQFQNRTGKMAPEHKR"
BASE COUNT          246 a          377 c          388 g          203 t
ORIGIN      
        1 ccggccggcg gcggcggcga agacgctgga cgaggtcgcg gcctggcgcg cgatctgccc
       61 ccagatcacc ctgcgatcca ccttcatcgt cggctatccc ggcgagaccg agaccgaatt
      121 ccagactctg ctggactggc tggacgaggc gcgactggat cgcgtcggct gctttcaata
      181 cgagaacgtc aagggcgcgc gggcaaacga tctgcccgat catgtcgccc ccgaaatcaa
      241 gcaggacagg ttcgagcggt tcatgcagaa ggcgcaggcc atcagcgagg caaagctcgc
      301 cgccaagatc ggacagcggg tccaggtgat cgtggatcag gtggacgccg atggcgccac
      361 ctgccgcacc aaagccgatg cgcccgaaat cgacggcaac ctgttcatcg accaggggtt
      421 cgaggcgctg tcgcccggcg atatcgtcac cgtgaccgtg gacgaggccg gcgaatacga
      481 cctgtggggt cacatgtgag cctgcgcaac cggctgcccg ccttcatcag cgatcactac
      541 gaggtccatg aatggcgcca tgccagcgcg atcctggccc atgatttccc cgacgaatgg
      601 cgcgatatcg tcgatgtcct gaccgcgttc cggctgcgac gcgaatggat cgaagtcggc
      661 ggcggcaaca agtcgcgcgt ctcggccttc atcgacggcg cgctggcgcg gcgcggatgg
      721 tccgaacgcc agttccggac cggcatcgtc gtggacgatt cgctgaccga aagccccacg
      781 cacaaggtgg actgcttcaa gaacggcatc ggcctggaaa tcgaatggaa caacaaggat
      841 ccgttctatg accgtgatct gaacaatttc aggctgctct tcgatctgcg cgcgctgagc
      901 gtgggcgtga tcgtcacccg atccgacgcg ctgcaacgaa tcttcaggac tttgggacga
      961 ggatcgtcct atggcgaatc gacgacgcat atgtccaagc ttctgccgcg gattgaaggt
     1021 ggcggcgggg ccggttgtcc gctattggta ttcgggatca ccgaagcact atatgtagaa
     1081 gggcgaggcg atgaacagcg cgagtgacga tcttctggcg gcagccggat ccacgcgttt
     1141 cggcaccatc ctcgccgatc cgccctggca gttccagaac cgcaccggca agatggcgcc
     1201 agaacacaaa aggc
//
LOCUS       DTVW01000553            1274 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1671108, whole
            genome shotgun sequence.
ACCESSION   DTVW01000553 DTVW01000000
VERSION     DTVW01000553.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1274)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1274)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1274
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1671108"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(236..>1274)
                     /locus_tag="EYO87_07340"
     CDS             complement(236..>1274)
                     /locus_tag="EYO87_07340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011747297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HIC65793.1"
                     /translation="HEIPLLIFPPWINKFYILDLKPQNSLIRWLLDQGHTLFIVSWKN
                     PDASYAEVGMEEYVAAYLDAMDKVRDLTDQKKLNVVGYCIAGTTLALTLALLKQRGDD
                     RVNSATLFTALTDFSDQGEFVSFLQDDFVNGIAEEVERHGLLRAQLMSRTMSFLRAND
                     LVWGPAIRSYMLGEQPPAFDLLFWNGDSTNLPGKMAMQYLRGLCQRNDFAGNGFDLMG
                     HKLTLSDVTVPLCAVSCETDHIAPWKDCWRGVAQMGATDKTFILSESGHIAGIVNPPS
                     KKKYGHYTGNGDFSHGHEAWREQADFAPGSWWPRWGEWLAERAGRMVDARQPVEGLGA
                     APGSYVHDRAG"
BASE COUNT          243 a          394 c          376 g          261 t
ORIGIN      
        1 gaggtgtcga ccgggaaatt cgccatcatg tcctggaagg tcttggtaaa gtcgggggtc
       61 ttcgtagcca tctcatctct ccttttcggc gcggccaatg cgggttccga gggattcgcc
      121 acgcccggtt atcgtgagac caatatgaat gctgcgctgc ggcatttcaa gcccgaatgc
      181 tgcgttgcag caaatttttc caggagcctg aaatccctcg gacatcgcat gcggatcacc
      241 cggcgcggtc gtgaacatag ctgccgggcg cggcgcccag cccttcgacg ggctgccgtg
      301 catcgaccat ccgccctgcc ctttcggcca gccattcccc ccagcggggc caccagctgc
      361 ccggcgcgaa atcggcctgt tcacgccatg cctcgtggcc atgagaaaag tcgccattgc
      421 ccgtgtagtg accgtatttc ttcttcgacg gcgggttgac gatacccgcg atatggccgc
      481 tttcggacag gatgaaggtc ttgtcggtcg cgcccatctg cgccacgccg cgccagcaat
      541 ctttccaggg cgcgatgtga tcggtctcgc aggacacggc gcaaagcggc actgtgacat
      601 ccgacaatgt cagcttgtgg cccatcagat cgaagccatt gcccgcgaaa tcgtttcgtt
      661 ggcacaggcc gcgcagatat tgcatggcca tcttgcccgg caggttggtg ctgtcgccat
      721 tccagaacag cagatcgaag gcgggcggct gttcgcccag catgtagctg cggatggccg
      781 ggccccagac cagatcgttg gcgcgcagaa agctcatcgt gcgcgacatc agttgcgccc
      841 gcagcaggcc atgccgctcg acctcttcgg cgatgccgtt gacgaaatcg tcctgaagga
      901 agctgacgaa ttccccctga tccgagaaat cggtcaatgc ggtgaacagc gtcgccgaat
      961 tcacgcgatc gtcaccacgc tgcttcagca atgcaagcgt cagcgccagg gtcgtgccgg
     1021 cgatgcaata gccgaccacg ttcagcttct tctggtcggt cagatcgcga accttgtcca
     1081 tcgcgtccag ataggcggcg acatattcct ccattccgac ctcggcatag ctggcatcgg
     1141 gattcttcca gctgacgatg aacaacgtgt gaccctgatc cagaagccag cggatcaggc
     1201 tgttctgggg tttcaggtcc aggatgtaga acttgttgat ccagggcgga aagatcagca
     1261 gcgggatctc gtgc
//
LOCUS       DTVW01000554            2155 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1673518, whole
            genome shotgun sequence.
ACCESSION   DTVW01000554 DTVW01000000
VERSION     DTVW01000554.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2155)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2155)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2155
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1673518"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..535)
                     /locus_tag="EYO87_07345"
     CDS             complement(<1..535)
                     /locus_tag="EYO87_07345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008554195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HIC65794.1"
                     /translation="MTMIQNHLPTAELQAIDAAHHMHPFTAGAELSAKGARVITRAEG
                     VFLTDSDGNEILDGMAGLWCVNIGYGREELVQAAAEQMRQLPFYNTFFQTTHIPALSL
                     AKRLAELAPGDLNHVFFNGSGSDSNDTNLRIVRHFWAAQGQPEKQVVISRWNGYHGST
                     MGAASLGGMKGMHAQGGL"
     gene            complement(632..1453)
                     /locus_tag="EYO87_07350"
     CDS             complement(632..1453)
                     /locus_tag="EYO87_07350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014876326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HIC65795.1"
                     /translation="MPFSLRNSPVGGSHCLSQPNLIKSEWASQHDNRDRWRRSCQDQV
                     TGPFEKRNARNLNNPEPKPPEHVRVHHRLREMILSGDLAPGQPVTIQGLVAMLGAGMT
                     PVREAIRRLIAEGALQFQGNRRVSVPILSEAQIDELLFARLALEPELVRRAAPLLTTA
                     QIAGLNRIDDVLNQAIAGGDITGYMMQNHRFHMTLYAASASQVLLPLVEALWLRAAPS
                     LRVMCGRFGTRNLPDLHQQALAALARGDGTAAGVAIAGDIRQGMENVRAILREKI"
     gene            1441..>2155
                     /locus_tag="EYO87_07355"
     CDS             1441..>2155
                     /locus_tag="EYO87_07355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005980375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HIC65796.1"
                     /translation="MKKAWMPLAALIAAGTAAQAEEVRVYNWSDYIDESLLAKFEDET
                     GIDLIYDVFDSNEVLETKMLAGSSGYDVVVPTGSFLQRQIQAGVFQKLDYDKLPNAVN
                     LWDVIKERTAKYDPGNEYSINYMWGTTGLGVNVEKVRQALGEDAPIDSLDLIFKPENM
                     EKLASCGVMFLDAPTEVIPAALKFLGEDPDSKDPDVIAKVEGVLMPVRPYISKFHSSE
                     YINALANGDICVAFGWSGDI"
BASE COUNT          398 a          661 c          707 g          389 t
ORIGIN      
        1 gcaggccgcc ctgcgcgtgc atccccttca tcccgcccag gctggccgcg cccatggtgg
       61 acccgtgata gccgttccat cgcgagatca cgacctgctt ttcgggctgg ccctgcgcgg
      121 cccagaagtg ccgcacgatc cgcaggttgg tgtcgttgga atccgatccc gaaccgttga
      181 agaagacgtg gttcagatcg ccgggcgcaa gctcggccag gcgtttggca aggctcagcg
      241 ccggaatgtg ggtcgtctgg aagaaggtgt tgtagaacgg cagctggcgc atctgttcgg
      301 cggcggcctg caccaattcc tcgcgcccat agccgatatt gacgcaccac aggccggcca
      361 tgccgtccag gatctcgttc ccgtcgctgt ctgtcaggaa cacgccctcg gcgcgggtaa
      421 tgacgcgcgc gcccttcgcg ctcagctccg cgccggcggt gaagggatgc atgtgatggg
      481 ccgcgtcgat ggcctgcaat tcggccgtgg gcaggtggtt ctggatcatc gtcaggctcc
      541 tcgcacgcgg atcggaacga aaaaatggcc gcgcatggcg accctttgcg gacaagatag
      601 agcttcgccg aatggcgtca acccgatttg atcaaatctt ttcgcgcagg atggcgcgaa
      661 cgttctccat cccctgcctg atgtcgccgg cgatggctac gccggcggcc gtcccgtctc
      721 cgcgcgccag cgcagccagc gcctgctggt gcagatcggg caggttgcgg gtgccgaatc
      781 ggccgcacat gacccgcagc gatggcgcgg cgcgcagcca cagggcctcg accagcggca
      841 gcaggacctg cgaggccgag gcggcgtaaa gcgtcatgtg aaagcggtgg ttctgcatca
      901 tgtagccggt gatgtcgccg ccggcgatgg cctggttcag aacatcgtcg atccggttca
      961 gaccggcgat ctgggcagtg gtcagcagcg gcgcggcgcg gcgcaccagt tcgggttcca
     1021 gggcgaggcg ggcgaacagc aattcgtcga tctgggcctc ggacaggatc ggcaccgaaa
     1081 cccgccggtt gccctgaaat tgcaaggcgc cctcggcgat cagccgccgg atcgcctcgc
     1141 gcacgggggt catgccggcg cccagcatcg ccaccagccc ctggatcgtg accggctggc
     1201 ccggcgccag atcgcccgac aggatcatct cgcgcaggcg gtggtggacg cggacatgtt
     1261 ccggaggctt cggttcggga ttgttcaaat tccgggcatt cctcttttcg aacgggccgg
     1321 tgacttggtc ttgacaggat cgccgccacc tgtcccgatt atcatgttgc gacgcccatt
     1381 cgcttttgat caaattgggc tgcgaaagac aatgagaacc accaacaggg gagtttcgca
     1441 atgaaaaagg catggatgcc gctggccgcc cttatcgccg ccgggaccgc cgcgcaggcc
     1501 gaggaggtcc gcgtctacaa ctggtccgac tatatcgacg aatcgctgct ggcgaaattc
     1561 gaggacgaaa ccggaatcga tctgatctac gacgtcttcg acagcaacga ggtgctggaa
     1621 accaagatgc tggcgggatc gtcgggctat gacgtggtcg tgccgaccgg atcctttctt
     1681 cagcgccaga tccaggcggg cgttttccag aagctggatt acgacaagct gcccaacgcg
     1741 gtgaacctgt gggacgtgat caaggaacgc acggccaaat atgatcccgg caacgaatat
     1801 tcgatcaatt acatgtgggg cacgaccggg cttggcgtga atgtcgagaa ggtcaggcag
     1861 gccctgggcg aggatgcgcc gatcgacagc ctggatctga tcttcaagcc cgagaacatg
     1921 gagaagctgg cctcctgcgg cgtcatgttt ctggacgcgc cgaccgaggt gatccctgcg
     1981 gcgctgaagt tcctgggcga ggatcccgac agcaaggatc ccgacgtgat cgccaaggtc
     2041 gagggggtgc tgatgccggt cagaccctat atctcgaagt tccacagttc ggaatacatc
     2101 aacgcgctgg ccaatggcga catctgcgtg gccttcggct ggtcgggcga catcc
//
LOCUS       DTVW01000555            2622 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1674965, whole
            genome shotgun sequence.
ACCESSION   DTVW01000555 DTVW01000000
VERSION     DTVW01000555.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2622)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2622)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2622
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1674965"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..360
                     /locus_tag="EYO87_07360"
     CDS             <1..360
                     /locus_tag="EYO87_07360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019564294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-glucoside ABC transporter
                     substrate-binding protein"
                     /protein_id="HIC65797.1"
                     /translation="SMGQPVLGGGTLFSVLTDNPAARAFIDFLKTPAAHEIWMAQKSF
                     LTPYKGANPDAYANDGQKKMGKILTDATTFRFDGSDLMPGAIGAGAFWTGMVDFVGGA
                     SAQQVADQIQQTWSTLN"
     gene            422..1414
                     /locus_tag="EYO87_07365"
     CDS             422..1414
                     /locus_tag="EYO87_07365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HIC65798.1"
                     /translation="MELLWLASGTIIIGVFGCVAWFWGSNMILDAVYPPRGAAAGRNI
                     RRAGQIRPWLFLGPAILFLSLYLVYPVLDSLWRSLNNANGSRFVGFSNYTWLAGDSKF
                     RESMLNNLLWLLVVPALSTLFGLIAAQLTDRIRWGNIGKSLIFMPMAISFVGAGVIWK
                     FIYEYRGPDEVQIGLLNWIVTKLGGDPQIWLTLIPWNNLLLMIVLVWIQTGFAMVILS
                     AALRGIPEETIEAAILDGASPMQVFMKIKVPQIMGTIAVVWTTITIVVLKVFDIVFVM
                     TNGQWGTQVLANLMYDWTFRASDYGRGSAVAMILMVLVTPIMVWNIRNARREVR"
     gene            1414..2547
                     /locus_tag="EYO87_07370"
     CDS             1414..2547
                     /locus_tag="EYO87_07370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009465166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HIC65799.1"
                     /translation="MDGMAGRKSSLVWAVNISALLLVILWTIPTLGLFVSSFRDRDQI
                     ASSGWWQSFSASEQTGFVRTGTDKDAEQRDGLYIIEGNVLEGGQSLVAWGTGARQPAE
                     FQPGETTRIEDGWDLTVNEDGSYRLTSARPFDMRRGERIFVTTEAPPKFTTRNYSRVL
                     QAEGLGRAFMNTLTVTIPATIIPILIAAFAAYALAWMEFPGRAILTAAVVGLLVVPLQ
                     VALIPLLRLHNEIGIGKGYLGIWLAHTGFGLPLAIYLLRNYMVGLPREVIESARVDGA
                     TEFQIFRRIILPLSFPALASFAIFQFLWVWNDLLVATVFLGNTREQLVMTGVLRELMG
                     SKGGEWEILATSAFISIAVPLVVFFAMQKYLVRGLLAGSVKGG"
BASE COUNT          443 a          808 c          855 g          516 t
ORIGIN      
        1 agcatgggcc agccggtcct gggcgggggc acgctgttct cggtcctgac cgacaatccc
       61 gccgcgcgtg ccttcatcga ttttctcaag accccggccg cgcacgaaat ctggatggcc
      121 cagaaaagct tcctgacgcc atacaagggc gccaatccgg atgcctacgc caatgacggg
      181 caaaagaaga tgggcaagat cctgaccgac gccacgacct ttcgctttga cggttcggac
      241 ctgatgcccg gagccatcgg cgcgggcgcc ttctggaccg gcatggtcga tttcgtcggc
      301 ggcgcctcgg cccagcaggt cgccgaccag atccagcaga cctggtccac gctgaactga
      361 ccgcaagaac cggccgcggc ggcccgaccc gccgcggccc agcgaaaaga ggagcgaggg
      421 gatggagctt ttgtggctgg cctcgggcac gatcatcatc ggtgtcttcg gctgcgtggc
      481 ctggttctgg ggctcgaaca tgatcctcga cgcggtctat ccgccgcgcg gcgcggcggc
      541 gggccgcaac atccgaaggg ccgggcagat ccggccctgg ctgtttctgg ggccggcgat
      601 cctgttcctg tcgctctatc tggtttatcc ggtgctcgac agcctgtggc ggtcgctgaa
      661 caatgccaat ggcagccgtt tcgtgggatt cagcaactac acctggctgg cgggcgacag
      721 caagtttcgc gaatcgatgc tgaacaatct gctgtggctt ctggtggtgc cggcgctttc
      781 gacgctgttc gggctgatcg cggcgcaact gaccgaccgc atcagatggg gcaatatcgg
      841 caagtcgctg atcttcatgc cgatggcgat ctctttcgtc ggtgccgggg tgatctggaa
      901 attcatctac gaatatcgcg gccccgacga ggtgcagatc ggcctgctga actggatcgt
      961 gacgaaactg ggcggcgatc cgcagatctg gctgacgctg atcccgtgga acaatctcct
     1021 gctgatgatc gtgctggtct ggatccagac cggctttgcc atggtgatcc tgtccgccgc
     1081 cctgcgcggc atccccgaag aaacgatcga ggccgcgatc ctggacgggg cctcgcccat
     1141 gcaggtgttc atgaagatca aggtgccgca gatcatgggc acgattgccg tggtctggac
     1201 gacgatcacc atcgtcgtgc tgaaagtctt cgacatcgtc ttcgtgatga ccaacggcca
     1261 atggggcacc caggtcctgg ccaacctgat gtatgactgg acctttcgcg cgtccgatta
     1321 cggacgcggc tcggcggtgg cgatgatcct gatggtcctg gtcacgccga tcatggtctg
     1381 gaacatccgc aacgcccgca gggaggtgcg ctgatggacg ggatggcggg ccgcaagtcg
     1441 tcgctggtct gggcggtcaa catttccgcc ctgctgctgg tgatcctgtg gacgatcccg
     1501 acgctggggc tgttcgtgtc gtcctttcgc gaccgcgacc agatcgccag ttccggctgg
     1561 tggcagtcct tctcggcctc cgaacagacg gggttcgtgc gaaccggaac cgacaaggac
     1621 gcggagcagc gggacgggct ctacatcatc gagggcaatg tcctggaggg cgggcaatcg
     1681 ctggtcgcct ggggcaccgg cgcgcgccag ccggccgagt tccagccggg cgagacaacc
     1741 cggatcgagg atggctggga tctgaccgtg aacgaggacg gatcctatcg gctgacctcg
     1801 gcccggccct tcgacatgcg acgcggcgaa cggatcttcg tcaccaccga ggcgccgccg
     1861 aaattcacca cccggaacta cagccgcgtc ctgcaggccg aagggctggg ccgcgccttc
     1921 atgaacacgc tgacggtgac gattccggcc accatcatcc cgatcctgat cgcggccttc
     1981 gccgcctatg cgctggcctg gatggaattt cccggccgcg cgatcctgac cgccgccgtg
     2041 gtcggcctgc tggtcgtgcc gctgcaggtg gcgctgatcc cgctgctgcg gctgcataac
     2101 gagatcggca tcggcaaggg ctatctgggc atctggctgg cccataccgg attcggcctg
     2161 ccgctggcga tctatctgct gcgaaactac atggtcggcc tgccgcgcga ggtgatcgaa
     2221 agcgcccgcg tcgatggcgc gaccgagttc cagatcttcc gtcgcatcat cctgccgctg
     2281 tcctttccgg cccttgcctc tttcgcgatc ttccagtttc tgtgggtctg gaacgacctg
     2341 ctggtggcca cggtcttcct tggcaatacc agggaacagc ttgtgatgac gggcgttttg
     2401 cgcgaattga tgggatcgaa gggcggcgaa tgggaaattc tggcgacatc ggccttcatc
     2461 tcgatcgcgg tgccgctggt cgtgttcttc gcgatgcaga aatatctggt ccgcggcctt
     2521 ctggccggat cggtgaaagg tggatgactt gacggaaaag acggccgatt ggtggaaggg
     2581 cgggatcatc tatcagatct atccgcgcag ttttcaggac ag
//
LOCUS       DTVW01000556            1299 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1675495, whole
            genome shotgun sequence.
ACCESSION   DTVW01000556 DTVW01000000
VERSION     DTVW01000556.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1299)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1299)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1299
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1675495"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..264
                     /locus_tag="EYO87_07375"
     CDS             <1..264
                     /locus_tag="EYO87_07375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012973862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIC65800.1"
                     /translation="DAPILLLDEATSALDTASERLVQDALDRLARGRTTLVIAHRLST
                     IRNADKIVVIEAGRVVEQGSHDQLMARRGAYARLVALQFGEEQ"
     gene            261..980
                     /locus_tag="EYO87_07380"
     CDS             261..980
                     /locus_tag="EYO87_07380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011747076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="folate-binding protein"
                     /protein_id="HIC65801.1"
                     /translation="MSRQIIRVTGEDRLDFLQDLVTNDVTRAPCWAALLTPQGKYLAD
                     FLILSDGDALLLDVDAGLAEDLLRRLGMYKLRSKVALEAVAMPIARGTGPAPDGAIAD
                     PRHDALGWRLYGQRGDDGSDWDAIRVAHCIPESLIELIPNETFILEAGFQRLHGVDFR
                     KGCYVGQEVTARMKHKTELRKGLITLRVEGEAPVGTAITREGREVGTLFTQSGGRGIA
                     HVRFDRLGAGMEAGPARIVAE"
     gene            995..>1299
                     /locus_tag="EYO87_07385"
     CDS             995..>1299
                     /locus_tag="EYO87_07385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017978229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase IV"
                     /protein_id="HIC65802.1"
                     /translation="MAPDAQPPLRKIIHIDMDAFYASVEQRDDPELRGKPVAVGGGSM
                     RGVVAAASYEARVFGIRSAMPSVTARRLCPDLIFVRPRFEIYRDISGQIRDIFADYTP
                     "
BASE COUNT          209 a          421 c          453 g          216 t
ORIGIN      
        1 gacgccccga tcctgcttct ggacgaggcg accagcgcgc tggacaccgc cagcgaacgg
       61 ctggtgcagg atgcgctgga caggctggcg cgcgggcgca cgacgctggt catcgcgcat
      121 cggctgtcca cgatccgcaa tgccgacaag atcgtcgtga tcgaggccgg ccgggttgtg
      181 gaacagggta gtcatgacca gttgatggca aggcgcggcg cctatgcccg ccttgtcgcg
      241 ctgcaattcg gagaggaaca atgagccgcc agatcatccg tgtgaccggc gaggatcggc
      301 tggatttcct gcaggatctg gtcacgaacg acgtgacccg cgcaccctgc tgggccgcgc
      361 tgctgacgcc gcagggcaag tatctggcgg atttcctgat cctgtccgat ggtgacgcgc
      421 tgctgctgga tgtcgatgcg gggctggccg aggatctgct gcggcggctg ggcatgtaca
      481 agctgcgctc gaaggtcgcg ctggaggcgg tggcgatgcc gatcgcgcgc ggcaccggcc
      541 ctgcgcccga tggcgccatc gccgatccgc gccacgacgc tttgggctgg cgcctttacg
      601 gccagcgggg cgatgacggc agcgactggg acgcgatccg cgtcgcccat tgcatccccg
      661 aaagcctgat cgaactgatc ccgaacgaga ctttcatcct cgaggccgga ttccagcgtc
      721 tgcacggcgt cgatttccgc aagggctgct atgtcggtca ggaagtcacc gcgcggatga
      781 agcacaagac cgaattgcgc aagggtctga tcaccctgcg cgtcgagggc gaagccccgg
      841 tcggcaccgc catcacccgc gaggggcgcg aagtcggcac cctgtttacc caatcgggcg
      901 gtcgcggcat cgcccatgtc cgcttcgacc ggctgggcgc ggggatggag gcaggcccgg
      961 cccgaatcgt cgccgaatga gcgtcggggc cggcatggcc cccgacgcgc agccaccgct
     1021 gcgcaagatc atccatatcg acatggatgc cttctatgcc tcggtcgagc agcgcgacga
     1081 tccggaattg cgcggcaagc cggtcgctgt gggcggcggt tcgatgcgcg gggtggtggc
     1141 ggcggccagc tacgaggcgc gggtcttcgg gatccgctcg gccatgccct cggtcacggc
     1201 gcgcaggctg tgccccgatc tgatcttcgt aaggccccgg ttcgagatct atcgcgacat
     1261 ctcgggccag atccgcgaca tctttgccga ttacacgcc
//
LOCUS       DTVW01000557            1851 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1675914, whole
            genome shotgun sequence.
ACCESSION   DTVW01000557 DTVW01000000
VERSION     DTVW01000557.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1851)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1851)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1851
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1675914"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..609)
                     /locus_tag="EYO87_07390"
     CDS             complement(<1..609)
                     /locus_tag="EYO87_07390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018634203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug ABC transporter permease"
                     /protein_id="HIC65803.1"
                     /translation="MSGDRAFPAAAWATAFLGIARRETLRFVNQRGRFLAALVRPLVW
                     LFIFAAGFRAVLGLSITPPYQTYVLYEVYVTPGLCAMIQLFNGMQSSLSMVYDRDTGA
                     MRTLLVSPFPRWFLLASKLVAGVLVSIIQVYTFLAIAWFWDVQPPPWGYLAVLPALIL
                     SGLMLGAMGLFLSSTIRQLENFAGVMNFVIFPMFFASSALYPL"
     gene            complement(606..1328)
                     /locus_tag="EYO87_07395"
     CDS             complement(606..1328)
                     /locus_tag="EYO87_07395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HIC65804.1"
                     /translation="MTAALDIDRVSHSFGSVAALTDVSLHVPRGGFTALLGVNGAGKT
                     TLFSLITRLYDNTSGTIRVAGHDLRRAPRQALARLGIVFQSRALDADLSVRQNLAYHA
                     ALHGIGRAEARVRIAEVLDQAGLTDKGGDRVSALSGGQTRRAEIARALIHRPDILLLD
                     EATVGLDVKSRAEVLALTRRLIAEQGVSALWATHIMDEIQPDDDLVILHQGQILRRGR
                     ASDIAGRQGLTQAFLSLTGTPA"
     gene            complement(1337..1729)
                     /locus_tag="EYO87_07400"
     CDS             complement(1337..1729)
                     /locus_tag="EYO87_07400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013651772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65805.1"
                     /translation="MHEAKGKFDYGLAGLLSSDNRADLAPLTMAAGQPVASGDYTLSS
                     GGYYRIDINADGSQELGLSGGDFFRAIWVNEIVVNGIEIRPTGVHSLEFDEAGTASIS
                     FVAILPGRYTLSIPGARGDTQRAVFTIR"
BASE COUNT          335 a          622 c          632 g          262 t
ORIGIN      
        1 cagcggatag agcgcggagg aggcgaaaaa catcgggaag atgacgaagt tcatgacgcc
       61 cgcgaaattc tccagctggc gtatggtcga ggacaggaaa agccccatcg cccccagcat
      121 cagccccgac aggatcagcg cgggcagcac cgccagatag ccccagggcg gcggctgcac
      181 gtcccagaac catgcgatcg ccaggaaggt atagacttgg atgatcgaaa ccaggacccc
      241 cgcaaccagt ttcgaggcca gcaggaacca gcgcgggaac gggctgacca gcagggtccg
      301 catggcgccg gtgtcgcggt catagaccat cgacagcgag gattgcattc cgttgaacag
      361 ctggatcatc gcgcacagtc ccggcgtcac gtaaacctcg tagagcacat aggtctgata
      421 gggcggcgtg atcgacaagc caaggacggc gcggaacccg gccgcgaaga tgaacagcca
      481 gaccagcggc cgcaccagcg ccgccaggaa gcggccgcgc tggttgacga agcgcagcgt
      541 ctcgcgccgg gcgatgccca gaaaggccgt cgcccacgcc gcggccggga aggcgcggtc
      601 gccgctcatg ccggggtgcc ggtcaggctc agaaaggcct gggtcagtcc ttgccggccg
      661 gcaatgtccg aggcgcggcc ccggcgcagg atctggccct gatgcaggat caccagatcg
      721 tcgtcgggct ggatctcgtc catgatgtgg gtggcccaca gcgccgagac gccctgttcg
      781 gcgatcagcc ggcgggtcag ggccagcacc tcggcgcgcg atttcacgtc aaggccgacg
      841 gtcgcctcgt ccagcagcag gatatcgggg cggtgaatca gggcgcgggc gatttcggcc
      901 cgcctggtct gtccgcccga cagggcgctg acccggtcgc cgcccttgtc ggtcaggccg
      961 gcctgatcca gaacctcggc gatgcgcacc cgtgcctcgg cccggccgat cccatgcaac
     1021 gcggcgtggt aggcaaggtt ctggcgcacg ctcagatcgg cgtccagcgc gcggctttga
     1081 aacacgatac ccagccgcgc cagggcctgc cgcggcgcgc ggcgcagatc gtggccggca
     1141 acccggatcg tgcccgaagt attgtcgtag agccgggtga tcagcgagaa aagggtcgtc
     1201 ttgcccgccc cgttcacccc cagcagcgcg gtaaagccgc cgcgcggcac gtgcagcgac
     1261 acgtcggtca gcgccgcgac gctgccgaag gaatggctga ccctgtcgat gtccagtgcg
     1321 gcggtcacga aagcccctac cggatggtga agacggcccg ctgggtgtcc ccgcgcgcac
     1381 cgggaatgga cagcgtgtat cggcccggca gaatggccac gaagctgatc gaggcggtgc
     1441 cggcctcgtc gaattcaagg ctgtgcacgc ccgtcggccg gatctcgatc ccgttcacga
     1501 cgatttcgtt cacccagatc gcgcgaaaga aatcgccgcc cgacaggccc agttcctgac
     1561 tgccatcggc gttgatgtcg atccggtaat acccgcccga ggacagcgtg taatcgccgc
     1621 ttgcgaccgg ctgtccggca gccatcgtca gcggcgccag atcggcgcgg ttgtccgagg
     1681 acagaagccc cgccaatccg taatcgaact tgcccttcgc ctcgtggatg ccggcggccg
     1741 cgtccgtcgg tgccgcgtca tcgtcgtcgc catcttcggg ggcggtcggc ccggaccggg
     1801 attccccggc cggggcatct gcggcaggaa cggcgtcctg cgccatggcg g
//
LOCUS       DTVW01000558            2801 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1677041, whole
            genome shotgun sequence.
ACCESSION   DTVW01000558 DTVW01000000
VERSION     DTVW01000558.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2801)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2801)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2801
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1677041"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..518
                     /locus_tag="EYO87_07405"
     CDS             <1..518
                     /locus_tag="EYO87_07405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007798512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIC65806.1"
                     /translation="HQFSGGQRARVGIARALAVRPDFLVCDESVAALDVSIQAQVLNL
                     FVKLRQDYDLTYLFVSHDLGVVEHVSDRIAVMYLGRLVELGEAEALIARPNHPYTQAL
                     ISEIPTFETGKRRYHAIKGEIPSPLDPPKGCHFHPRCPHAHDRCRTEVPALREVAPGR
                     MSACHLNDRAA"
     gene            544..1959
                     /locus_tag="EYO87_07410"
     CDS             544..1959
                     /locus_tag="EYO87_07410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006472104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HIC65807.1"
                     /translation="MRNDNPIWPFVDQKAVDFTGLADRVFDTPELAYDEVKSCAAHTQ
                     MLREQGFRVTRNVAGIPTAVMGEAGEGGPVIAILGEYDALPGLSQEPGLAQPRQIADH
                     GFGHGCGHNLLGSAALSAATAVKDWLESEGIAGRVRYYGCPAEEGGAAKTYMVREGQF
                     DDVDIAITWHPASFNAVDDMRSLANTRIDFTFHGKAAHAAGAPELGRSALDSVELMNI
                     GVNYMREHMPDAARVHYAYLDAGGIAPNVVQARATVRQLIRSPSLGGLSSLVERVRAI
                     AEGAALMSGTRVTSRVFSAVSNLTENRPLSEAMQAEFEALGPVPFDAEDAVFASSIRE
                     SLSREDIADTFERLAMKPDYDMALCDFIAPLDRPFMGGMGSTDVGDVSWAVPTVQARV
                     ATCAVGTALHSWQQTAQGKAPAAHKGMLHAAKVMAATARRALTDPALIAAAKKAHESH
                     LAEYPYTCPIPPETRPPVGEG"
     gene            complement(2039..>2801)
                     /locus_tag="EYO87_07415"
     CDS             complement(2039..>2801)
                     /locus_tag="EYO87_07415"
                     /inference="COORDINATES: protein motif:HMM:PF03466.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65808.1"
                     /translation="HAHRILATVSIAEEALAELDLGSLPRLDFAVIDDLDASLTPALA
                     ASLQARLPRCFICTFSGRSDQVTSRLISREADIAVTASIPANMHRFQILQILREKFVL
                     VTARGAYSADLDWRAQLSDLPLVQYSEAMPMGRMVSTHLKRIGFYAPRRFSFEASRSV
                     IATVARTGGWTLTTPLSILDAGRFKDQIDLSTLPFAGLSRQIYLINRVDELGSLPETL
                     ARQFRALLQQEAVREFARMAPHMTGSIEVCHELLV"
BASE COUNT          503 a          919 c          920 g          459 t
ORIGIN      
        1 cgcatcagtt ttccggcggc cagcgggcgc gggtcggcat cgcccgcgcg ctggcggtgc
       61 ggcccgattt cctggtctgc gacgaatccg tggcggcgct ggacgtgtcg atccaggcgc
      121 aggtgctgaa cctgttcgtg aagctgcggc aggattacga cctgacctac ctgttcgtca
      181 gtcacgatct gggcgtggtc gaacatgtct cggaccggat cgcggtgatg tatctcggcc
      241 gcctcgtcga actgggcgag gccgaggcac tgatcgcccg tccgaatcac ccctatacac
      301 aggcgctgat cagcgagatc ccgacattcg agaccggcaa gcgccgttat cacgccatca
      361 agggcgagat cccctcgccc ctggacccgc ccaaggggtg ccatttccac ccccgctgcc
      421 cccatgccca tgaccgctgc cgcaccgagg tgccggccct gcgcgaggtg gcgcccggcc
      481 ggatgtcggc ctgccacctg aacgaccggg cggcctgacg ccccacttcc aaggagattt
      541 cagttgcgaa acgacaaccc gatctggcct ttcgtcgatc agaaggcggt ggatttcacc
      601 ggcctggccg atcgcgtctt cgacacaccc gaactggcct atgacgaggt caagtcctgc
      661 gccgcgcaca cgcagatgct gcgcgagcag ggttttcgcg tgacccggaa tgtcgccggc
      721 attcccaccg ccgtgatggg cgaggcgggc gaaggcgggc cggtcatcgc gatcttgggc
      781 gaatacgacg cgctgcccgg cctgtcgcag gaacccgggc tggcccagcc ccggcagatc
      841 gccgatcacg gcttcggcca tggctgcggg cacaacctgc tgggttcggc cgcattgtcc
      901 gcagccaccg ccgtcaagga ttggctggaa tccgaaggca ttgccggccg cgtgcgctat
      961 tacggctgtc ccgccgaaga aggcggcgcc gccaagacct acatggtccg cgagggtcag
     1021 ttcgacgacg tcgatatcgc catcacctgg cacccggcca gtttcaacgc ggtcgacgac
     1081 atgcggtcgc tggccaatac ccggatcgat ttcaccttcc acggcaaggc ggcgcacgcg
     1141 gcgggcgcgc ctgaactggg gcggtccgcg ctggattcgg tcgagctgat gaacatcggc
     1201 gtcaactaca tgcgcgaaca catgccggat gcggcgcggg tgcattacgc ctatctggac
     1261 gcgggcggca tcgcgccgaa cgtcgtgcag gccagggcca cggtgcgcca actgatccgc
     1321 agccccagcc tgggcggtct gtcgtcactg gtcgaacgcg tgcgcgccat cgccgagggc
     1381 gcggcgctga tgtcgggaac ccgggtaacc tcgcgcgtct tttcagccgt gtcgaatctg
     1441 accgagaacc gacccctgtc cgaggcgatg caggccgagt tcgaggctct gggccccgtc
     1501 cccttcgacg ccgaggatgc agtctttgcc agcagcatcc gcgaaagcct gtcgcgcgaa
     1561 gacattgccg acacattcga acgtctggcg atgaaacccg attatgacat ggcgctgtgc
     1621 gatttcatcg cgcccctgga ccggcccttc atgggcggca tgggctcgac cgatgtgggc
     1681 gatgtcagct gggcggtccc gaccgtccag gcgcgcgtgg cgacctgcgc ggtgggcacg
     1741 gcgctgcata gctggcagca gaccgcgcag ggcaaggcgc ccgccgcgca caaggggatg
     1801 ctgcacgccg ccaaggtgat ggccgcgacc gcccgcaggg cgctgaccga tccggccctg
     1861 atcgcggcgg cgaaaaaggc ccatgaatcg catctggccg aataccccta tacctgtccg
     1921 attccgcccg aaaccaggcc gcccgtcggc gaaggctgat gcatcggtgc aagcttgtcc
     1981 ggccatgtgg acctggcggg caaggtgcgc cggcggaaac tgctgctctg gaacgggatc
     2041 agaccagcaa ttcgtgacac acctctatcg agccggtcat atgtggcgcc attctggcga
     2101 attcccgcac cgcctcctgt tgaagcaggg cgcgaaattg tctggccagg gtttcgggta
     2161 gcgaacccag ttcatccacc cggttgatca gatagatctg ccgagacagc cctgcaaagg
     2221 gaagcgtcga cagatcgatc tggtccttga accggccagc gtcgagaatg ctgagcggtg
     2281 ttgtcagcgt ccagccgccg gtgcgggcaa cggtcgcaat gaccgacctg ctggcctcga
     2341 aggaaaaccg tcgcggcgcg taaaagccga tccgcttcag atgcgtcgat accattcgac
     2401 ccatcggcat cgcttcggaa tactgcacca gcggcaggtc cgacagctgc gcgcgccagt
     2461 cgagatctgc ggaatatgcc ccgcgcgccg tcaccagcac gaatttctcg cgcagaatct
     2521 gaaggatctg aaaccggtgc atgttggcgg ggatgctggc ggtaacggcg atatcggcct
     2581 ctcgcgagat cagccgggag gtgacctgat cggagcggcc cgaaaaggtg cagatgaagc
     2641 agcgcggcag tctggcttgc agggacgcgg ccagcgcagg ggtcagcgag gcgtccagat
     2701 cgtcgatgac cgcaaagtcg agacggggca gactgccaag gtcaagctct gccaacgcct
     2761 cttcggcaat cgaaaccgtg gcgagaatcc gatgcgcgtg c
//
LOCUS       DTVW01000559            1111 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1677166, whole
            genome shotgun sequence.
ACCESSION   DTVW01000559 DTVW01000000
VERSION     DTVW01000559.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1111)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1111)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1111
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1677166"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..581)
                     /locus_tag="EYO87_07420"
     CDS             complement(<1..581)
                     /locus_tag="EYO87_07420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HIC65809.1"
                     /translation="MLTEVGTEAGALPLWQTSLPGRPLTGLTVLVVEDSRYASEAVRL
                     LCLRSGARIRRADCLRSAARHLQTYRPAVVIVDLGLPDGDGSGLIRQIAATEPRVPVV
                     LGMSGDPDARDAAMNAGADGFLPKPVESLAVFQQAILSALPAQTQGFGPRVLPDDVIH
                     PDASGLRDDLAHVAEILSNARETAEIDYIARFLA"
     gene            715..>1111
                     /gene="mce"
                     /locus_tag="EYO87_07425"
     CDS             715..>1111
                     /gene="mce"
                     /locus_tag="EYO87_07425"
                     /EC_number="5.1.99.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007795083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA epimerase"
                     /protein_id="HIC65810.1"
                     /translation="MIGRLNHVAIAVPDLAAAAAQYEDRLGAKVGAPQDEPDHGVTVI
                     FVEVPNTKIELLCPLGEDSPIRGFLDKNPSGGIHHMCFEVEDILAARDRLKAEGARVL
                     GSGEPRIGAHGKPVLFLHPKDFNGCLIELE"
BASE COUNT          204 a          362 c          360 g          185 t
ORIGIN      
        1 gccaggaagc gggcgatata gtcgatctcg gccgtctctc gtgcgttcga caggatctcg
       61 gcgacatggg ccagatcgtc gcgcagcccg gaggcatcgg gatggatcac gtcgtcgggc
      121 aggacgcggg gcccgaaacc ctgtgtctga gccggaagcg ccgaaaggat cgcctgctga
      181 aatacggcca ggctttcgac gggtttgggc agaaagccgt cggcccccgc attcatcgcc
      241 gcatcgcgcg catccggatc gcccgacatg cccaggacca ccggcacacg cggttcggtt
      301 gccgcgatct ggcggatcag ccccgagcca tcgccgtcgg gcagacccag atcgacgatc
      361 accaccgccg gccggtaggt ctgaagatgg cgcgccgctg aacgcaggca atcggcgcgc
      421 ctgatccgtg cgcccgagcg caggcatagc agacgcaccg cctcgcttgc atatcgcgaa
      481 tcctcgacca cgagcaccgt aaggccggtc agtggacgcc ctggcagcga cgtttgccac
      541 aatggcaggg cccccgcttc ggttccgact tctgtcagca tggctgtttc cccactcatg
      601 tcgtctgatg ggttcagata aaccgcgatt cgctaagaag ccgttaacgc ggcccggttt
      661 tcctttcgct cgcgcgctga aacccctaga acatgccgca aacggaggtt ccagatgatc
      721 ggacgtctca atcatgtggc catcgcggtg cccgatctgg ctgcggcggc ggcgcaatac
      781 gaagacaggc tgggcgcgaa ggtcggcgcg ccgcaggacg agcccgatca cggcgtcacc
      841 gtcattttcg tggaggtgcc caacaccaag atcgaactgc tctgcccgct gggcgaggac
      901 agcccgatca ggggatttct ggacaagaac ccgtcgggcg ggatccatca catgtgtttc
      961 gaggtcgagg atatcctggc cgcccgcgac cgcctgaagg ccgagggtgc ccgtgtgctg
     1021 ggcagtggcg agccccggat cggtgcccac ggcaagccgg tgctgttcct gcacccgaag
     1081 gatttcaacg gctgcctgat cgaactggag c
//
LOCUS       DTVW01000560            1868 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1677772, whole
            genome shotgun sequence.
ACCESSION   DTVW01000560 DTVW01000000
VERSION     DTVW01000560.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1868)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1868)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1868
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1677772"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..170)
                     /locus_tag="EYO87_07430"
     CDS             complement(<1..170)
                     /locus_tag="EYO87_07430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010394834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol acyltransferase"
                     /protein_id="HIC65811.1"
                     /translation="MNESSADARADMQARLDPLIAERAPWLYSGKAHHRIARRVMMRL
                     LRYPRTIRLAAEL"
     gene            complement(213..>1868)
                     /locus_tag="EYO87_07435"
     CDS             complement(213..>1868)
                     /locus_tag="EYO87_07435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011750287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3458 domain-containing protein"
                     /protein_id="HIC65812.1"
                     /translation="CRDWFQLCLKEGLTVFRDQQFTSDMRSAPVKRIEDVRALRARQF
                     REDQGPLAHPPRPDHYEEINNFYTATVYEKGAEVISMLKRLVGDDGYARALDLYFDRH
                     DGQAATIEDWLKVFEDATGRDLAQFKHWYTDAGTPRLTMAEDWDADANRLTLTFTQDT
                     PPTPGQADKPARVIPIAVGLIGRNGDEVLPTRMLEMTEARQSFDFDGLGARPVVSALR
                     GFSAPVMLDRPLDDATRAFLLAHDTDPFARWEAGRDLALSALTALSQGREAGADFVDA
                     IGRLAGDDSADPAFRALCLTLPGDEDVATRLTAQGVTPDPDAIHAAREGLARRVAEAH
                     GDLLAAIHDRMRVDGPYSPDAAAARRRSLRIAALGLLNRIDGGDRASVLFGSAGNMTE
                     RMAALICLIRRGRAASALSALEDEFGDNRLVMDKWFSVQVMAAPPAEAVATARSLSER
                     QDFDWKNPNRFRALLGGLAGNHAGFHAADGSGYDFTADWLMRMDRANPQIAARMSTAF
                     ETWPRYDATRRARALAALQRIAAMEGISRNLREMVSRMIAAGA"
BASE COUNT          297 a          656 c          632 g          283 t
ORIGIN      
        1 agttcggccg ccagccggat cgtgcgcgga tagcgcagaa gccgcatcat cacccgccgg
       61 gcgatgcggt ggtgcgcctt tcccgaatag agccacggtg cccgctcggc aatcagcgga
      121 tcgagtcggg cctgcatatc ggccctggca tcggcggacg attcattcat ttgcaccatt
      181 ctgccccgcc acaagagccg ccacaagcgc cctcaggctc cggcggcgat catccgcgaa
      241 accatctcgc gcaggttgcg gctgatccct tccatcgcgg cgatccgctg caatgccgcc
      301 agcgcccggg cgcggcgggt ggcgtcatac cggggccagg tctcgaacgc ggtggacatc
      361 cgggcggcga tctggggatt ggcgcgatcc atccgcatca gccagtcggc ggtgaaatca
      421 tagcccgatc cgtccgccgc gtggaaaccc gcgtggttgc ccgcaagccc gcccagcagc
      481 gcacgaaagc ggttggggtt cttccagtcg aaatcctggc gttcggacag gctgcgggcg
      541 gtcgcgaccg cctcggcggg cggcgcggcc atgacctgga ccgagaacca cttgtccatc
      601 accagccggt tgtcgccgaa ttcgtcctcc agcgccgaaa gcgcggatgc cgcccggccg
      661 cgccggatca gacagatcag cgctgccatc cgctcggtca tgttgccggc gctgccgaac
      721 agcacgctgg cccggtcgcc gccgtcgatg cggttcagca gcccgagcgc cgcgatcctg
      781 agcgagcggc gcctggccgc cgccgcatcg ggcgagtagg ggccatcgac ccgcatccgg
      841 tcatggatcg ccgccagcag atcgccatgg gcctcggcca cgcggcgggc aagaccctcg
      901 cgtgcggcat ggatcgcatc cgggtccggc gtcacgccct gggctgtcag gcgggtggcg
      961 acatcctcgt ctccgggcag ggtcaggcac agggcgcgaa aggccggatc ggcgctgtcg
     1021 tcgcccgcca gccggccgat cgcatcgacg aaatcggccc ccgcctcgcg cccctgcgac
     1081 agggcggtca gcgccgacag ggccagatcg cgaccggcct cccagcgggc gaagggatcg
     1141 gtgtcgtggg ccagcaggaa ggcgcgggtg gcgtcgtcca gcggtcgatc cagcatcacc
     1201 ggcgccgaga agccgcgcag cgccgagacg accggccgcg cgcccagccc gtcgaaatcg
     1261 aaactttgcc gcgcctcggt catctccagc atccgggtcg gcagaacctc gtcgccattg
     1321 cgaccgatca gcccgaccgc gatgggaatg acacgggcgg gcttgtcggc ctggccgggc
     1381 gtgggcggcg tgtcctgcgt gaaggtcagg gtcagacgat tggcatcggc gtcccaatcc
     1441 tcggccatgg tcaggcgcgg cgtgccggca tcggtatacc aatgcttgaa ctgcgccagg
     1501 tcgcggcccg tcgcatcctc gaagaccttc agccagtcct cgatcgtcgc cgcctggccg
     1561 tcatggcggt cgaaatacag atccagcgcc ctggcatagc cgtcgtcgcc gaccagacgc
     1621 ttcaacatgc tgatcacctc ggcgcccttt tcatagacgg tcgcggtgta gaaattgttg
     1681 atttcctcat agtgatcggg ccgcggcgga tgggccagcg gaccctgatc ctcgcggaac
     1741 tggcgggcgc gcagggcgcg cacgtcctcg atccgcttga ccggcgcgct gcgcatgtcg
     1801 ctggtgaact gctggtcgcg aaagaccgtc agaccctcct tgaggcaaag ctggaaccag
     1861 tcgcggca
//
LOCUS       DTVW01000561            1477 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1678867, whole
            genome shotgun sequence.
ACCESSION   DTVW01000561 DTVW01000000
VERSION     DTVW01000561.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1477)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1477)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1477
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1678867"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..692)
                     /locus_tag="EYO87_07440"
     CDS             complement(<1..692)
                     /locus_tag="EYO87_07440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_386946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65813.1"
                     /translation="MPGDVRIDGLNGAGRGLYRALPGLPDEMVDAEGAIRPLWRRLAG
                     HIGALDAEALTRDLARADRYLLDSGVFFRQYGAGQSTERTWPLSHIPVLLSEADWAQI
                     SAALIQRADLLESVMADLYGPNDLVASGRLPAQLVAGNREWLRPMVGVRPRSGHYLHF
                     LAFELGRGPRGNWWVLADRAQAPSGAGYALENRVATARALGEVYGQENVHRLAGFFRD
                     FRDALLAQAGRGG"
     gene            complement(699..>1477)
                     /locus_tag="EYO87_07445"
     CDS             complement(699..>1477)
                     /locus_tag="EYO87_07445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_354038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HIC65814.1"
                     /translation="PDARMSLAQQLLLRALIARFWNEPLTGDLTRWGTALHDRFMLPH
                     FVWTDFCDVLQDMTNHGFPMQREWFRAQAEFRFPFCGETQVEGVHLELRQALEPWHVL
                     GETGALGGTVRYTDSSTERLQVKLSAADPTRYQVLCNGRALPLTDIGASEAVAGVRFK
                     AWQPASAMHPVIPVDAPLTLDIFDTWSALALGGCVYHVAHPGGRNYETFPVNNNEAEA
                     RRLARFQPFGHRPGHFHVVAPERPHREFPMTLDLRRAVGI"
BASE COUNT          265 a          508 c          495 g          209 t
ORIGIN      
        1 ccgccgcgcc cggcctgggc cagcagcgca tcgcggaaat cgcgaaagaa gccggccagc
       61 cggtgcacgt tttcctgacc atagacttcg cctaaggcgc gcgcggtggc gacgcggttt
      121 tccagcgcgt agcccgcccc cgaaggcgcc tgtgcccggt cggccagcac ccaccaattg
      181 ccgcgcggtc cccggccaag ttcgaaggcg aggaaatgca ggtaatgccc cgaacgcggc
      241 cgcaccccca ccatggggcg cagccattcg cgattgccag ccaccaattg cgccggaagc
      301 cgccccgagg cgaccagatc attcggtccg taaagatcgg ccatgaccga ttccagcaga
      361 tcggcgcgct ggatcagggc ggccgaaatc tgcgcccagt cggcctcgga cagcaggacg
      421 ggaatatggc tcagcggcca tgtccgctcg gtcgattgcc cggcgccgta ttggcgaaag
      481 aacaccccgc tatccagcag gtaccggtcg gcgcgggcca gatcgcgggt cagtgcctcg
      541 gcgtccaggg cgccgatatg gccggccaga cgccgccaca gcgggcggat cgcgccttcg
      601 gcatcgacca tctcgtcggg tagtcccggc agcgcgcgat agaggccccg ccccgccccg
      661 ttcaggccgt cgatccgcac atcgcccggc atgatgcctc agatcccgac cgcgcgccgc
      721 agatccagcg tcatcggaaa ttcgcgatgc ggccgttcgg gcgcgacgac atggaaatgg
      781 cccggacgat ggccgaacgg ctggaaccgg gccagtcggc gcgcctcggc ctcgttgttg
      841 ttgacgggga aagtctcgta gttgcgcccg ccgggatggg cgacgtgata gacgcagccg
      901 ccaagcgcga gggccgacca ggtgtcgaag atgtccaagg tcagcggcgc atcgaccggg
      961 atgacgggat gcatcgcgga ggcgggctgc catgccttga aacgcacacc ggccacggcc
     1021 tcgctcgcgc cgatatctgt cagcggcagc gcgcggccat tgcacagcac ctgatagcgg
     1081 gtcggatcgg cggcggacag cttgacctgc aaacgctcgg tcgagctgtc ggtatagcgc
     1141 acggtgccgc caagcgcgcc ggtctcgccc aggacgtgcc acggctccag cgcctggcgc
     1201 agttccagat gcacgccctc gacctgggtc tcgccgcaga agggaaagcg gaattcggcc
     1261 tgcgccctga accattcccg ttgcatcgga aagccgtggt tcgtcatgtc ctgcaaaacg
     1321 tcgcagaaat cggtccagac gaaatgcggc agcatgaagc ggtcatgcag ggccgtgccc
     1381 cagcgggtca gatcaccggt cagcggttcg ttccagaacc gcgcgatcag ggcgcgcagc
     1441 agcaattgct gggccaggct catccgcgca tcgggcg
//
LOCUS       DTVW01000562            1123 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1679368, whole
            genome shotgun sequence.
ACCESSION   DTVW01000562 DTVW01000000
VERSION     DTVW01000562.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1123)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1123)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1123
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1679368"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..304)
                     /locus_tag="EYO87_07450"
     CDS             complement(<1..304)
                     /locus_tag="EYO87_07450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018000115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein meaA"
                     /protein_id="HIC65815.1"
                     /translation="MAPKDKPWLFRTYAGHSTAEKSNALYRGNLAKGQTGLSVAFDLP
                     TQTGYDSDHVLARGEVGKVGVPICHLGDMRTLFDAIPLEQMNTSMTINATAPWLLSL"
     gene            516..>1123
                     /locus_tag="EYO87_07455"
     CDS             516..>1123
                     /locus_tag="EYO87_07455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_354044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="crotonyl-CoA carboxylase/reductase"
                     /protein_id="HIC65816.1"
                     /translation="MALDAPTPIAPYDAPQKDLYEIGEMPPLGHVPKQMHAWTIRRER
                     HGEPDKAMQIEVVDTPVIDSHEVLVLVMAAGVNYNGIWAGLGQPISPFDGHKADYHIA
                     GSDASGIVWAVGDKVKRWKVGDEVVIHCNQDDGDDEECNGGDPMYSPTQRIWGYETPD
                     GSFAQFTNVQAQQLMPRPRHLTWEESACYTLTLATAYRMLFG"
BASE COUNT          234 a          357 c          342 g          190 t
ORIGIN      
        1 acagcgacag cagccagggc gcggtcgcgt tgatcgtcat cgaggtgttc atctgctcca
       61 gcgggatcgc atcgaacagg gtgcgcatgt cgcccagatg gcagatcggc accccgacct
      121 tgccgacctc gccgcgcgcc aggacgtgat cgctgtcata gcccgtctgg gtcggcagat
      181 cgaaggccac cgacagcccg gtctgcccct tggccagatt gccgcgatac agcgcgttcg
      241 acttttcagc cgtcgaatgg cccgcatagg tgcggaacag ccagggcttg tctttggggg
      301 ccatgcggat cacctcgcaa caatcttccg gtccatgacc cgataccgaa atattcatac
      361 gccgtcaatt cgccgcaatg cggcatgacc atgattttat ccgacacaaa attacaatac
      421 aggccctaaa agggttgcaa tattgcgtga agcattttac gacaagcccg atcccgcgcg
      481 gcgattctgc gtcgcggcaa gaacaggaga cgctgatggc cctcgacgcc ccgaccccga
      541 tcgcgcccta tgacgcgccc cagaaggatc tctacgagat cggagagatg cctcccctgg
      601 gtcatgtgcc aaagcagatg catgcctgga ccatccgccg tgaaagacat ggcgagcctg
      661 acaaggccat gcagatcgag gtcgtggaca ccccggtcat cgacagccac gaagtgctgg
      721 tcctggtgat ggcggcgggg gtcaactaca atggcatctg ggccggcctg ggtcagccga
      781 tcagcccctt tgacggccac aaggcggact accacatcgc cggttcggat gcctcgggga
      841 tcgtctgggc cgtgggcgac aaggtgaaac gctggaaggt cggcgacgag gtcgtgatcc
      901 actgcaacca ggatgacggc gacgacgagg aatgcaacgg cggcgacccg atgtattcgc
      961 cgacccagcg gatctggggc tacgagaccc cggatggcag cttcgcccag ttcaccaatg
     1021 tccaggcgca gcaactgatg ccgcgcccgc gccacctgac atgggaggaa tcggcctgct
     1081 acacgctgac gctggccacc gcctaccgga tgctgttcgg cca
//
LOCUS       DTVW01000563            1087 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1679658, whole
            genome shotgun sequence.
ACCESSION   DTVW01000563 DTVW01000000
VERSION     DTVW01000563.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1087)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1087)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1087
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1679658"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1087)
                     /locus_tag="EYO87_07460"
     CDS             complement(<1..>1087)
                     /locus_tag="EYO87_07460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_115217003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIC65817.1"
                     /translation="YVLIYFLGALALAGSQDWRLAVPFALWAVAYAVMLWQIVPRLGR
                     VAQEQADARSAMTGRVVDSYTNIATVKLFSHSAREEDWMRDGMDAFLRTVHRQMRLST
                     IQDVTLNAINVALIGAVTALGLWLWSEGRVEVGAVAVAVPLALRLNNMAHWIMWEFAA
                     LFENIGTVRDGISSLALPRQVLDAPAARSLRRGPGAVEFRNVTFRYGGAPGARPLPVL
                     DDLSLTIAPGERVGLVGRSGAGKSTLVNLLLRLHDLESGRITIDGQDIARVTQDSLRG
                     AIGVVTQDSSLLHRSVRDNIAYGRPDAAEDQIAQALEMAEAHGFVPGLSDSFGRCGLD
                     AHVGERGVKLSGGQRQRIAIARVALKDA"
BASE COUNT          198 a          415 c          323 g          151 t
ORIGIN      
        1 cgcatccttc agcgccaccc gcgcgatcgc gatcctctgg cgctggccgc ccgacagctt
       61 caccccgcgt tcgccgacat gcgcatccag gccgcatcgc ccgaaactgt ccgagagccc
      121 cggcacgaaa ccatgcgcct cggccatttc cagcgcctgc gcgatctgat cctcggccgc
      181 atccgggcgg ccataggcga tgttgtcgcg caccgagcga tgcagaagcg aactgtcctg
      241 cgtgaccacg ccgatcgcgc cgcgcagcga atcctgggtc acccgcgcga tatcctgccc
      301 gtcaatggtg atgcggccgc tttcaagatc gtgaagccgc agcagcaggt tcaccagcgt
      361 cgatttgcct gcccccgacc ggccgaccag tccgacccgc tcgccgggcg cgatcgtcag
      421 gctcagatcg tccagcaccg gcagcgggcg cgcgcccggg gcgccgccat agcggaaggt
      481 gacgttccgg aactccaccg cgccgggtcc gcgacgcaag gaccgcgcgg cgggcgcgtc
      541 cagaacctga cggggcagcg caaggctgga aatgccgtcg cgcacggtgc cgatattctc
      601 gaacagggcg gcgaattccc acatgatcca gtgcgccatg ttgttgagtc gcaaggccag
      661 cggcaccgcg accgcaaccg cgccgacctc cacccggccc tcggaccata gccacagccc
      721 aagcgccgtc accgcgccga tcagcgccac gttgatcgcg ttcagcgtca cgtcctgaat
      781 cgtcgaaagc cgcatctgcc ggtgcacggt ccgcaagaag gcgtccatcc cgtcgcgcat
      841 ccagtcttcc tcgcgggcgg aatgggaaaa cagcttgacc gtcgcgatat tggtatagct
      901 gtccacgacc cgcccggtca tggccgagcg cgcatcggcc tgttcctgcg ccacccgccc
      961 caggcgcggc acgatctgcc acaacatcac cgcataggcc actgcccaca gcgcgaaagg
     1021 caccgccagc cgccaatcct gactacccgc cagcgccagc gcgccgagga aatagatcag
     1081 cacatag
//
LOCUS       DTVW01000564            1005 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1679787, whole
            genome shotgun sequence.
ACCESSION   DTVW01000564 DTVW01000000
VERSION     DTVW01000564.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1005)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1005)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1005
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1679787"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1005)
                     /locus_tag="EYO87_07465"
     CDS             complement(<1..>1005)
                     /locus_tag="EYO87_07465"
                     /inference="COORDINATES: protein motif:HMM:PF00208.19"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Glu/Leu/Phe/Val dehydrogenase"
                     /protein_id="HIC65818.1"
                     /translation="GGIRMMPNVTMEEVFALARTMTWKNALAGLPFGGAKAGIAFDPK
                     GKSKEEKKKIVQAFSRALKPFAPKYYIAAPDMNTGEEEMQWFVEANGNWRSATGKPAN
                     LCMEVFPKGKGEKGSVAERHCGIPHEFGSTGFGVAHATKVAAHHAGLDIKNATVAIQG
                     FGNVGEFTAKYLIEMGAKVVATSDASGAVYNKSGFSFEDLVSCKREKGTVCRIDVSSE
                     KISHDKLFELPVDILIPAAIPDAITEKNYKNVKAKIIVEAANVPIPHDIEEKLYRNGV
                     LVVPDIIANAGGVISSYAEYRGYNPKDMFRMVKSKIVKNTKIVLENSKNNKTSPRNAA
                     M"
BASE COUNT          225 a          275 c          195 g          310 t
ORIGIN      
        1 cattgcagca tttcgtggac ttgttttatt atttttggaa ttttccaaaa caatcttagt
       61 gtttttcact atcttgctct ttaccatgcg gaacatatct ttgggattgt atcccctgta
      121 ttcggcgtag gaggaaatca ccccgcccgc gtttgcgatg atatccggca ctacaagaac
      181 tccattcctg tataattttt cttcgatgtc gtgaggaata ggcacgtttg ctgcctccac
      241 gataattttt gccttcacgt ttttgtaatt tttttccgta atagcatcgg gaattgccgc
      301 gggtatcagg atatcaaccg gaagttcaaa aagtttatca tgcgaaattt tttcgctgct
      361 tacgtcaatc ctacaaacgg tgcctttctc tcttttgcac gaaactaaat cctcaaagct
      421 aaaaccactc ttgttatata cagcgccgct tgcatcggaa gtcgcaacta ctttggcacc
      481 catctcaata agatactttg ccgtaaactc ccccacattt ccaaatccct gtatcgccac
      541 agttgcattt ttaatatcca aaccggcgtg gtgtgccgca acttttgtcg catgtgctac
      601 gccaaatccc gtactgccga actcatgggg aatgccgcaa tgtctctctg cgacagatcc
      661 tttctcgccc ttacctttag ggaaaacttc catgcataaa ttcgccggct tgccggtggc
      721 cgagcgccaa ttaccgtttg cctctacaaa ccactgcatc tcttcctcgc ccgtgttcat
      781 atcgggggcc gcaatataat attttggagc aaatggtttt agggcgcgtg aaaacgcctg
      841 tacgattttc tttttttcct cctttgactt ccccttcgga tcaaatgcaa tccccgcctt
      901 cgcacctccg aatggcaatc cggcaagcgc gtttttccac gtcatggtgc gcgcaagcgc
      961 aaatacctcc tccattgtga cgtttggcat catgcgtatg ccgcc
//
LOCUS       DTVW01000565            2031 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1682085, whole
            genome shotgun sequence.
ACCESSION   DTVW01000565 DTVW01000000
VERSION     DTVW01000565.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2031)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2031)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2031
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1682085"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..990)
                     /locus_tag="EYO87_07470"
     CDS             complement(<1..990)
                     /locus_tag="EYO87_07470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008887403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65819.1"
                     /translation="MTALSAFLRKTPGEALREYFDRPEIGLPTEFDWPASDADLSGPL
                     LGAIEKMSRVQRDRISNDAERVHALSDEPGQAAIYSVAEDPALLDGLANPHARSLWMF
                     LNAQDRFRHAEEVRFTEDRRRGRMWAGYMTDAGCVVQRDASARHAFVSAIKEFSGAAH
                     AHVDIFDRVRTTHEGDECDLVQVTIYREGRPDDLLRFDDKGSLVRQAYRPVFEAAVTY
                     EPATGGIEVIANDKATRSEIVKATVTHLLGIEFKENRLPLRCYDLSVLLNPYDFPVDP
                     EDGIEGVEVRELRLMPIDDSDFRVTLEKPARADETIWAKAEERFGDRTPLSEGY"
     gene            complement(1098..1820)
                     /locus_tag="EYO87_07475"
     CDS             complement(1098..1820)
                     /locus_tag="EYO87_07475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008887488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ImmA/IrrE family metallo-endopeptidase"
                     /protein_id="HIC65820.1"
                     /translation="MVKMIRDNTGRFAERPFYAARDLDDECERLIRELLMKRHGKVDY
                     PVATDDLTVLIEMHDADLDPYADLSAYGPDVEGVTEFFPDRGPKVSISERIAADERRE
                     NRFRTTLTHEFGHVKFHGPLWEQKFANGDLLERGVNANKAISKRDNILDAPQSDWMEW
                     QAGYISGALLMPATPVRRLVSDYCSPRELHGDVHVSTEHAARLIQMVMERFAVSEEAA
                     RIRLLKLNLITATHGQASLFGR"
     gene            complement(1831..>2031)
                     /locus_tag="EYO87_07480"
     CDS             complement(1831..>2031)
                     /locus_tag="EYO87_07480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012177086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XRE family transcriptional regulator"
                     /protein_id="HIC65821.1"
                     /translation="YLNDIEHDRRSPSSGHLIRQFSGILNIPEDYLYALAGRLPDDLR
                     PDASTPDKVVEAFANFRKTLKE"
BASE COUNT          354 a          648 c          652 g          377 t
ORIGIN      
        1 gtagccctcg ctcaggggcg tgcgatcccc gaacctttcc tccgccttcg cccagatcgt
       61 ctcgtcggct cgggcgggct tctccagcgt cacccggaaa tcactgtcgt cgatcggcat
      121 cagacgcagc tcgcgcacct cgacgccctc gatcccgtcc tccgggtcga ccgggaaatc
      181 atacgggttc agaagcaccg aaagatcata gcagcgcagc ggcaggcggt tctccttgaa
      241 ctcgatgccg aggaggtgcg tgaccgtcgc cttcacgatc tcgctccgcg tcgccttgtc
      301 gttggcgatc acctcgatgc cgccggtcgc gggctcatag gtcactgcgg cctcgaacac
      361 gggacgatag gcctgccgga caagcgaccc cttgtcgtcg aagcggagca gatcgtcggg
      421 ccgtccctcg cggtagatcg tcacctgcac caggtcgcac tcgtcgccct catgcgtcgt
      481 cctcacccgg tcgaagatgt cgacatgggc atgggcggcg cccgagaact ccttgatcgc
      541 ggagacgaag gcatggcggg ccgacgcgtc gcgctgcacg acgcatccgg cgtcggtcat
      601 gtagccggcc cacatccgac cgcgccggcg gtcctccgtg aagcgaactt cctcggcatg
      661 acgaaaacgg tcctgtgcgt tcaggaacat ccagagcgac cgcgcgtgcg ggttcgcgag
      721 cccgtcgagg agggcgggat cctcggccac gctgtagatc gcggcctgcc ctggctcgtc
      781 ggacaaggca tggacgcgct cggcgtcgtt cgagatccgg tcgcgctgga cgcgggacat
      841 cttctcgatg gcgccgagaa gcggcccgga gaggtcggcg tccgatgcgg gccagtcgaa
      901 ctcggtgggc aggccgatct ccggccggtc gaagtattcg cgcagcgcct cgccgggcgt
      961 cttgcgaagg aaggcggaca gtgcagtcac cacgatctcc tttctggcga ttccatgtat
     1021 cggctgatct gctaatcagc gtaaatcgcg ccagtgggga gtcaatcgaa aaaatacgca
     1081 cttctgcgga ttcgcgatca gcgaccgaag agcgaggcct gtccgtgtgt cgcagtgatc
     1141 aggttgagct tcagcaacct gatgcgcgca gcctcttcgg agaccgcgaa ccgctccatg
     1201 accatctgga tcagccgcgc ggcatgctcc gtcgaaacgt gaacatcgcc atgcagctcg
     1261 cgcgggctgc agtagtcgga aacgaggcga cggaccggcg tggccggcat cagcagtgcg
     1321 ccgctgatat agccggcctg ccattccatc caatcggact gcggggcgtc caggatgttg
     1381 tcgcgcttgg agatcgcctt gttggcgttc acgccgcgct cgagcaggtc gccgttggcg
     1441 aacttctgct cccagagagg cccgtggaac ttcacgtgcc cgaactcatg ggtgagcgtg
     1501 gtgcggaagc gattctcgcg ccgttcatcg gccgcgatgc gttcggagat tgacaccttg
     1561 ggcccccggt cagggaagaa ctcggtgacc ccttcaacat cgggcccgta tgcggacagg
     1621 tcggcgtacg ggtcgaggtc tgcgtcgtgc atctcgatca gaacggtcag atcgtcggtc
     1681 gcaacgggat agtcgacctt tccgtggcgc ttcatcaaaa gctcacggat cagacgctcg
     1741 cattcatcgt cgagatcccg cgccgcgtag aagggtcgct cggcaaagcg gcccgtgttg
     1801 tcacggatca tcttcaccat gcgcaactcc ttactctttc aacgtcttcc tgaaattggc
     1861 gaaggcctcg acgaccttgt ccggggtgga cgcatccggc cgcagatcat ccggaagccg
     1921 gcctgcaagt gcgtacaggt agtcctccgg aatattcagg atgccggaga actggcggat
     1981 caggtgcccc gagctggggc tgcgtcgatc gtgctcgatg tcgttgaggt a
//
LOCUS       DTVW01000566            1214 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1682454, whole
            genome shotgun sequence.
ACCESSION   DTVW01000566 DTVW01000000
VERSION     DTVW01000566.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1214)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1214)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1214
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1682454"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..934)
                     /locus_tag="EYO87_07485"
     CDS             complement(<1..934)
                     /locus_tag="EYO87_07485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007427633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
                     /protein_id="HIC65822.1"
                     /translation="MPKDTQGHGPELGQFEWADPMLIERQLTEDERMLRDAARQFATD
                     VLAPRVTEAYRDEKSDPELFPLMGEAGLLGVTTAEEYGGLGQGYVTYGLVAREIERID
                     SGYRSMMSVQSSLVMYPIEAYGSEAQKKKYLPKLASGEMIGCFGLTEPDAGSDPGGMK
                     TVARKTDDGYVLNGSKMWISNSPFADVFVVWAKSDAHDGKIRGFVLDKGMEGLSAPKI
                     GGKLSLRASTTGEIVMKDVAVGEDALLPNVQGLKGPFGCLNRARYGISWGAMGAAESC
                     WHAARQYGLDRKQFGRPLAQTQLFQKKLADMQTEI"
     gene            complement(936..>1214)
                     /locus_tag="EYO87_07490"
     CDS             complement(936..>1214)
                     /locus_tag="EYO87_07490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017928483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long-chain fatty acid--CoA ligase"
                     /protein_id="HIC65823.1"
                     /translation="VLFVVQSAVIGRERDGNEDVLAFVEATGAGIDPAALGAFVADAL
                     SAYKRPSAIFVVDSLPAAATGKILKHKLLDIFAEQISAHDAQHDPKGH"
BASE COUNT          189 a          406 c          388 g          231 t
ORIGIN      
        1 tgatttcggt ctgcatgtcg gccagcttct tctggaaaag ctgtgtctga gccaggggcc
       61 ggccgaactg ctttcggtcc aggccgtact ggcgcgccgc gtgccagcag gactctgccg
      121 cgcccatcgc gccccaggag atcccgtagc gcgcccggtt caggcagccg aacggcccct
      181 tcagcccctg gacattgggc aggagcgcgt cctctcccac agccacgtcc ttcatcacga
      241 tctcgccggt ggtggaagcc cgcaagctga gcttgccgcc gatcttggga gccgacagcc
      301 cctccattcc cttgtccagc acaaagccgc ggatcttgcc gtcatgggcg tcggacttgg
      361 cccagaccac gaacacatcc gcgaagggcg agttcgagat ccacatcttc gagccgttca
      421 gaacatagcc gtcgtcggtc tttctggcga cggtcttcat gccgcccggg tcggagcccg
      481 cgtccggctc ggtcaggccg aagcagccga tcatctcgcc gctggccagc ttgggcaggt
      541 atttcttctt ctgcgcctcc gagccgtagg cctcgatcgg gtacatcacc agggacgact
      601 gcaccgacat catcgaccgg tagccggaat cgatccgctc gatctctcgg gcgacaagac
      661 cgtaggtgac gtagccctgt ccgagtccgc cgtattcctc ggccgtggtg acgcccagca
      721 ggccggcctc gcccatcagc ggaaagagtt cggggtcaga tttctcgtca cggtaggctt
      781 cggtcacgcg gggggccagc acgtcggtcg cgaattggcg ggccgcgtcg cggagcatcc
      841 gctcgtcctc ggtcagttgc cgttcgatga gcatcgggtc ggcccattcg aactgtccca
      901 gttcgggtcc gtgtccttgg gtgtccttgg gcatgtcagt gtcctttcgg gtcgtgttgc
      961 gcgtcatggg ccgagatctg ctcggcgaat atatccagca gcttgtgctt gaggatcttg
     1021 cccgtggccg cggcgggcag gctgtcgacc acgaatatag cagacggccg cttgtaggcc
     1081 gagagcgcgt ccgcgacgaa agcgcccagc gccgccgggt cgatgccggc gccggtcgcc
     1141 tcgacgaagg ccagcacgtc ctcattgccg tcgcgttcgc ggccgatcac ggcggactgg
     1201 acgacaaaga ggac
//
LOCUS       DTVW01000567            1349 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_16836, whole
            genome shotgun sequence.
ACCESSION   DTVW01000567 DTVW01000000
VERSION     DTVW01000567.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1349)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1349)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1349
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_16836"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(141..800)
                     /locus_tag="EYO87_07495"
     CDS             complement(141..800)
                     /locus_tag="EYO87_07495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018632519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrkA family potassium uptake protein"
                     /protein_id="HIC65824.1"
                     /translation="MGKQNRSFVVVGLGSFGSVVASELARFGNRVLGVDKNQRRVAAL
                     AEQLSNAVILDATDEGALREAGVDRYDVALVSIGNDLESNVIAAMNLRLIGVGSVWAK
                     AENRTHHRILSKIGADRVVLPELEMGRHTAQMLNNPAVQDYVALGNGFSVVNLMLPER
                     LKGKTLSELNIGEGITALGMMRGTEYIDLRGKADPVLNTNDRLLLLGKRVDLTRFGDR
                     I"
     gene            1167..>1349
                     /locus_tag="EYO87_07500"
     CDS             1167..>1349
                     /locus_tag="EYO87_07500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_354597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65825.1"
                     /translation="MTDSTQPKGQKNVKGRPGDERREREALKGRFEPDPEPDIEAIPA
                     PEGPTQVIQTDYEIGQH"
BASE COUNT          251 a          468 c          426 g          204 t
ORIGIN      
        1 cgcccgcgtg gtcgtgaagg gcagcatcag cgccagcccg ccggcaagga tcagcgacag
       61 gtacaggacc gccagcacgg ccggcggcgg cgtgcgcgac aaccagcccc ggaacgcggc
      121 cagcggatgc gtccgcacgc tcaaatccgg tcgccgaacc gggtcagatc gacgcgcttg
      181 cccagcagca gcaggcggtc attcgtgttc agcaccggat cggccttgcc gcgcaggtcg
      241 atatattcgg ttccgcgcat catcccaagc gcggtgatcc cctcgccgat gttcagttcg
      301 gacagtgtct tgcccttcag tcgctcggga agcatcaggt tcacgaccga aaagccgtta
      361 ccaagcgcga cgtaatcctg caccgccgga ttgttcagca tctgtgcggt gtggcggccc
      421 atctccagtt ccggcagaac cacgcggtcg gcgccgatct tggacaggat gcgatggtgg
      481 gtgcggtttt cggccttggc ccagaccgag ccgacgccga tcaggcgcag gttcatcgcc
      541 gcgatcacgt tgctttccag atcgttgccg atcgagacca gcgccacgtc gtagcggtcc
      601 accccggcct cgcgcagcgc gccctcgtcg gtggcgtcga ggatcaccgc attcgacaat
      661 tgctcggcca gggccgcgac ccgacgctgg ttcttgtcca cgcccagaac gcggttgccg
      721 aaccgcgcca gttcggatgc aaccacgctg ccgaaggagc cgaggccgac gacgacaaag
      781 ctgcgattct gcttgcccat ggaccctccg gaggaccgag tcgagacggc ggcgatactg
      841 ctcatgcagg acggccgggg tcaagccggg ccaccgcagc cgcttcttgc acccgccggg
      901 atcacgcctg gcaagggcgc gaccggccag cccgatccgg ttcccagacc gagccgcgtg
      961 ttttcgcgga cggattccgc attggcgccg gcggacaaag cggccgatgt cgcaacccgc
     1021 gttgcccggg tcgcatttgt ccgccacttt cgcgcccctt gtggccattc tgaagagaat
     1081 gtgacagaaa cccggttcca cgcgcggatt tccgccagtc acggctgatc cgccgccccg
     1141 atccaatcat aacgagaaag ggacgcatga cagattcgac acagcccaag gggcagaaga
     1201 acgtcaaggg ccggcccggc gacgaacgcc gcgaacgcga ggcgctgaaa ggccgcttcg
     1261 agcccgatcc cgaacccgat atcgaggcga tacccgcgcc cgagggcccc acccaggtga
     1321 tccagacgga ttacgagatc ggccagcac
//
LOCUS       DTVW01000568            1316 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_168405, whole
            genome shotgun sequence.
ACCESSION   DTVW01000568 DTVW01000000
VERSION     DTVW01000568.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1316)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1316)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1316
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_168405"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1316)
                     /locus_tag="EYO87_07505"
     CDS             complement(<1..>1316)
                     /locus_tag="EYO87_07505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006938001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hydantoinase B/oxoprolinase family protein"
                     /protein_id="HIC65826.1"
                     /translation="LKAYPAETLKPGDVLITNDPWLCAGHLFDIAIVTPAFRDGRLVG
                     LMGTVGHVSDIGGTKDSLHAREIYEEGLQIPPMKLFDAGVPNETLIQLIRQNVRNGEQ
                     VLGDIYSFVAANKLGAERLDAFMADYGMHDLGALAEVVQGLSEKAMRDAVRAIPDGEY
                     RSTITNNPLGEKISYPVLVKVEGDSITVDFDGAPPQLPQGGLNSTLNYTAAHATYPLK
                     CMLTPSVRGNAGCYRPFTVKAPEGSILNPTYPAAVNLRTRTGWYLAPNIFAALSKAAE
                     NKVQSFTGLAVAANIYGQDGQGTFYSDMLFVGGGQGGAARKDGHSSLLWPTSAANTSI
                     ELMESRVPVLVLEKSFLADSGGAGKQRGGLGQIVRFRKRADDGQEMLVSVYPEGVDNP
                     IPGLFGGHAGGGARGLVQSADGRLLRDCGTGALVSLKTTNEIVELV"
BASE COUNT          247 a          453 c          377 g          239 t
ORIGIN      
        1 aacaagctcg acgatttcgt ttgtggtctt cagcgacacc agcgccccgg tgccgcaatc
       61 gcgcagcagc ctcccatcgg cactttgcac caaaccccgc gcaccgccgc ccgcatgacc
      121 accgaaaagg cccggtatcg ggttgtcgac gccttcggga tagaccgaga ccagcatctc
      181 ctgcccgtca tccgcgcgct tgcggaagcg cacgatctgg cccaacccgc cgcgctgctt
      241 gccggcaccg cccgagtccg caaggaacga cttttccagc accagaacgg gaacccggct
      301 ttccatcaat tcgattgatg tgttcgccgc cgaggtcggc cagagcaacg aggaatgccc
      361 gtccttgcgc gcagccccgc cctgtccacc accgacgaag agcatgtcgg aatagaacgt
      421 cccctgcccg tcctgtccgt aaatgttcgc cgccaccgca agcccggtaa aggactgcac
      481 cttgttctcg gcagcctttg acagcgcggc gaagatgttc ggggccagat accagcccgt
      541 ccgcgttcgc aggttcactg ccgccggata ggtcgggttc aggatcgacc cctcgggcgc
      601 cttcaccgtg aacggacggt aacaccccgc attgccgcgc accgacggtg tgagcatgca
      661 tttcagcgga taggtcgcat gggcagccgt gtagttcagg gtcgagttca atccgccctg
      721 cggcagttgc ggcggcgcgc cgtcgaagtc gacggtgatg ctgtcgccct cgaccttgac
      781 cagcaccgga tacgagatct tttcgcccag cggattgttg gtgatggtcg agcggtattc
      841 gccatcggga atggcccgca cggcgtcgcg catcgccttt tccgacaggc cctgcaccac
      901 ctcggccagc gcgcccagat cgtgcatccc gtaatccgcc atgaaggcat cgagccgctc
      961 tgcccccagc ttgttggcgg cgacgaagga atagatgtcg cccagaacct gttcgccatt
     1021 acggacgttc tgacggatca gctggatcag tgtctcgttc ggcacgcccg catcaaaaag
     1081 cttcatcggc gggatttgca ggccttcttc atagatctca cgcgcatgca gcgaatcctt
     1141 ggtgccgccg atatctgaca cgtgccccac cgtacccatc agcccaacca accgcccgtc
     1201 gcggaaggcc ggtgtgacga tggcaatgtc gaacagatgc ccggcacaaa gccacggatc
     1261 gttggtgatg agcacatcgc ccggcttcag cgtctccgcc ggataggcct tgagca
//
LOCUS       DTVW01000569            5811 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1684280, whole
            genome shotgun sequence.
ACCESSION   DTVW01000569 DTVW01000000
VERSION     DTVW01000569.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 5811)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5811)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5811
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1684280"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..2258)
                     /locus_tag="EYO87_07510"
     CDS             complement(<1..2258)
                     /locus_tag="EYO87_07510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65827.1"
                     /translation="MTMIKSRHGAGVTSVGGVTFKGIDKPGMGWVSTLALTAYAGRMN
                     RLAVAVPGSVRQADGTYALDLTAQRDAATVDFESGGQNYVMNVSASAQEDGWGAGDYY
                     MLERDPGDASIIVEPGRNHRKWYASNSPDAWTKDSIAAAESISPNAVSDNWLIANPFY
                     GGSEEQPLLASLAVSAWRQAQLGTTTSNWILYERGYDYGGLDATPQRRAQGESPLHPM
                     LIGSWGTGPRPRGLSVFNSAWCPSHLVIRDISFDAIGSLSMWNWLITDCDNIKGDAAE
                     RRGEFGAQSQQSGEGFTGYRVDVTDVSLTSPKDGMLTWGENPHKQRLGGSYWNNVHGL
                     LLEEVIWDHNGWADGYDPTGAGGANTPQPPSQFSHNVYSSTHNSDQIYDHVISARAAS
                     QGLQTRSGAQFVDSLLLDNNIAGNDGGGNTTDYTIQGPRGNFSLHLGNVITSAGWRVA
                     PDIGAINWGMDIFSKMPSLVDVIVIHCANPDDPDEVALKVNPDFSFKSLGPYNAGKDE
                     GYFDNAIVYRWKEDFRTEGLDPAVLDRTTIQRHAADLLGQPTATIADYMTYIRGVPLS
                     QRRAAIDATLNYFRAPCAANLDQSYVKRVNAVECVFTPDDRGEGFRWDNRLNWSTGDR
                     PGSVPGDSVNLYGNRVKFGRFTTEVDSIAFGGGLLEVTSGKLTALAHADAANLGIREC
                     GQYVAPAGSDGSIAARGGRLTFAGAASGDLAVSGMAEVLLGAGLWFRFAATRKLSRRL
                     GRMTEIIRNIAEG"
     gene            complement(2260..4116)
                     /locus_tag="EYO87_07515"
     CDS             complement(2260..4116)
                     /locus_tag="EYO87_07515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65828.1"
                     /translation="MIHFSMGSGARPRHGKILPQDCEIRLLTAEEGLVASGLGRNGDS
                     LILNVTAPARLAGDYPVAVAALSRGPLCLVPPVLRDADGSASLLLAEGGLWACNAALG
                     EAAITARWLLDGQEIANQGGARLEPGPDHAGRTISYSETADQPGRTAIAVSPGLAVPP
                     GLPPQAETVISALAAPAETRTAGGDRIGGIAEIAIYRDIANYAASNGATIGSVAVEVN
                     GTARDDAFALSPGDVVTLRVTASDGTIRRWPLSTTQAAAAPPAVLTSRAYPTGFGTLT
                     YDISAQIPGAANSTGWAVSGPNAISIADGVLSFNSDAIQPGTMTLTGRAEGADNEAWT
                     LAVTFEAIAFSYDGADSVIVSYPADTPADGSIGFTPTGGEQDGRAITFTPADLDGLAD
                     GAGFAALAPLVSIAADGGTAGSVDAGDTIALDTPALYLYGGTEPTISYSAHDDGGVVE
                     ADITFPWTAPSGMSGSLSIVADDGFGNTAASASIPVVGSPVSAGNLLDLSQPIAGSSP
                     DTWQTQSLSPLVLKPTGSYIVGRGGWPFDVVAGQTYRITWNLSINESASGHSVRLLPD
                     SSGNGTPLASSYNPVGTLDYTATQTRRLWVGPALQKSNALRVTVNTYGVEKI"
     gene            complement(4116..4376)
                     /locus_tag="EYO87_07520"
     CDS             complement(4116..4376)
                     /locus_tag="EYO87_07520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011453101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65829.1"
                     /translation="MTDLFHYHAASLESPASHLQTVTPSDEADLDFTSRAIAAGADGF
                     VQVTTKSGTIGRVFVIAGAPFPIRATRIWASGTTATDIVALA"
     gene            4813..>5811
                     /locus_tag="EYO87_07525"
     CDS             4813..>5811
                     /locus_tag="EYO87_07525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007795429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis glycosyltransferase
                     WcaL"
                     /protein_id="HIC65830.1"
                     /translation="MPHPARIAYLTGEYPAISHTFILREVLALRARGLEVRTCSIRRT
                     AAAQHRGPDEKQAAASTFHVLDAAKRPGTLLAALGWALARPGRFGRMIRLALKTRPAG
                     IKATIWQIFYLIEAMVLARHLDRAGITRLHNHFAMASSTVAMLASELSGIPYSFTLHG
                     PADFWETGRWHLGEKIARARFVACISHFCRSQGMLFSDPAHWERLHIVHCGVDPDRYD
                     PAHIRDPGREAGRNVLFIGRLAAAKGVPILLDAFARLHAAHPDARLTLVGDGPARPVL
                     EARARDLGLGGAVRLTGALSQDEVTAELARADLFALPSFAEGVPVVLMEAMAAGLPV"
BASE COUNT          927 a         1940 c         1945 g          999 t
ORIGIN      
        1 ccctcggcga tattgcggat gatttccgtc atgcgcccca gccggcgaga gagcttgcgg
       61 gtcgcggcga agcgaaacca caggcccgcg cccagcagca cctcggccat gccgctgacc
      121 gccagatcgc ccgatgcggc ccccgcgaag gtcagccgcc cgccgcgcgc cgcgatagac
      181 ccgtccgaac cggccggcgc gacatattgc ccgcattcgc gaatgccgag atttgccgca
      241 tccgcatggg ccagggcggt cagcttgccc gatgtcacct ccagcagccc gccgccaaag
      301 gcgatgctgt ccacctcggt cgtgaagcgc ccgaatttca cccggttgcc atagaggttg
      361 acactatcgc ccggcaccga tccgggcctg tcgccggtgg accagttcag ccggttgtcc
      421 cagcggaaac cctcgccgcg atcatcgggg gtgaacacgc attccacggc gttgacccgt
      481 ttgacatagg actggtccag attggccgcg cagggcgcgc ggaaataatt cagcgtcgcg
      541 tcgatggcgg cgcggcgttg ggacagcgga acaccgcgga tataggtcat gtaatcggcg
      601 atggtggcgg tcggctggcc cagcagatcg gctgcatggc gctggatcgt ggttcggtcc
      661 aggacagccg ggtcgagccc ttccgttcgg aaatcctcct tccagcggta gacgatggca
      721 ttgtcgaaat agccctcgtc cttccccgcg ttgtaagggc ccagcgattt gaacgaaaaa
      781 tccgggttga ccttgagcgc cacctcgtcc ggatcatcgg gattggcgca atggatgacg
      841 atcacgtcca ccagcgaggg catcttgctg aaaatgtcca tgccccagtt gatggccccg
      901 atatcgggcg ccacccgcca tccggccgag gtgatcacat tgcccagatg cagcgagaaa
      961 ttgccgcgcg gcccctggat cgtgtaatcg gtggtattcc cgccgccatc attgccggca
     1021 atattgttgt ccagcagcag gctgtccacg aattgcgcgc cggaacgggt ctgcaagccc
     1081 tgcgacgcgg cccgcgcgct gatcacatga tcgtagatct gatcgctgtt atgggtgctg
     1141 ctgtagacat tgtggctgaa ctggctgggg ggctggggcg tgttcgcgcc gcccgcccct
     1201 gtggggtcat agccgtccgc ccagccattg tgatcccaga tcacctcttc cagcagaaga
     1261 ccatggacat tgttccaata ggatcccccc aggcgctgct tgtggggatt ttcaccccag
     1321 gtcagcatcc cgtccttcgg ggaggtcagg gaaacatccg tcacatcgac gcgatagccg
     1381 gtaaagccct cgcccgattg ctggctttgc gccccgaatt caccccgccg ttcggcggca
     1441 tcgcccttga tgttgtcgca atcggtgatc agccagttcc acatggaaag cgaaccgatc
     1501 gcgtcgaaac tgatgtcgcg aatgaccaga tgcgaagggc accaggccga attgaaaaca
     1561 gacagcccgc gcggccgcgg acccgttccc catgatccga tcagcatcgg atgcagcggg
     1621 ctttcccctt gtgcgcgccg ctgcggggta gcgtccaggc cgccgtaatc gtagcccctt
     1681 tcatagagga tccagttcga ggtggtcgtt ccaagctggg cctgccgcca tgcggatacg
     1741 gcaaggctgg ccagcaaggg ctgttcctcg ctgccgccat agaagggatt ggcgatcagc
     1801 cagttgtcgc tgaccgcgtt gggcgaaatg gactcggccg ccgcgatgct gtcttttgtc
     1861 caggcatcgg gggaattcga ggcataccat ttgcggtgat tgcggcccgg ctcgacgatg
     1921 atcgaagcat cgccgggatc gcgttccagc atgtagtaat cgcccgcccc ccagccgtct
     1981 tcctgggccg aggcgctgac gttcatgacg taattctggc cgccgctttc gaaatcgacc
     2041 gtggcggcat cgcgttgggc ggtcagatcc agggcatagg tgccatccgc ctgcctgacg
     2101 ctgcccggaa ccgcgacggc caggcggttc atccgcccgg catatgccgt cagcgccagg
     2161 gtgctgaccc agcccatgcc gggcttgtcg atgcccttga acgtcacccc cccgacagag
     2221 gtcacgcccg cgccgtgtct gctcttgatc atcgtcatgt cagattttct ccacgccgta
     2281 ggtgttcacg gtcacacgca gggcattgct tttctgcaaa gcggggccga cccacagacg
     2341 gcgcgtctgt gttgcggtgt agtcgagggt gccgacggga ttgtaggacg acgccagcgg
     2401 ggttccgttg ccgctgctgt cgggcagcag gcgaaccgag tggccggacg cgctttcgtt
     2461 gatcgacaga ttccatgtga tccggtaggt ctggcccgcc acgacgtcaa agggccatcc
     2521 accgcgcccg acgatgtatg atcccgttgg cttgagaacc agaggcgaca ggctctgggt
     2581 ttgccatgta tccggcgagc tgccggcaat cggctgcgac agatcaagaa ggtttccggc
     2641 cgaaacaggc gaccccacaa cagggatgga cgcgctggct gcggtgttgc cgaacccgtc
     2701 atcggccacg atgctcagcg aaccgctcat gccggaaggc gcggtccagg ggaacgtaat
     2761 gtcagcctcg accacgccgc catcgtcatg ggcggaataa ctgatcgtcg gctcggtccc
     2821 gccatagaga tacagcgccg gcgtatcgag cgcgatcgtg tcgcccgcat ccaccgatcc
     2881 ggccgtgccg ccatcggcgg cgatcgacac aagcggcgca agcgcggcaa agcccgcgcc
     2941 atcggccagc ccgtccagat cggcgggcgt gaaggtgatc gcgcgaccgt cctgttcgcc
     3001 accggtcggc gtgaagccga tgctgccatc ggccggggta tcggcgggat aggacacgat
     3061 caccgaatcc gcgccgtcat agctgaaggc gatggcctcg aaggtgacgg ccagcgtcca
     3121 ggcctcgttg tccgcgccct cggcccggcc ggtcagggtc atcgtgcccg gctggatcgc
     3181 gtcgctgttg aacgagagaa cgccgtccgc gatgctgatg gcgttcggcc cgctgacagc
     3241 ccatccggtc gaattggccg ctccggggat ctgcgccgaa atgtcatagg tcagcgtccc
     3301 gaatccggtc ggataggcgc gcgatgtcag gacggccggc ggggcggccg cggcctgggt
     3361 cgtggacagg ggccagcggc gtatcgtgcc gtcgctggcg gtgacgcgca gcgtgacgac
     3421 atcgcccggg ctcagcgcga aggcgtcgtc gcgcgcggtt ccgttcacct cgaccgcgac
     3481 actgccgatc gtggcgccgt tgctggcggc ataattcgcg atgtcgcggt agatcgcgat
     3541 ctccgcgatg ccgccgatcc tgtcgccgcc ggcggtccgc gtttcggcag gcgcggccag
     3601 ggccgaaatg acggtttcgg cttgcggcgg cagcccgggc gggaccgcaa ggcccggcga
     3661 gacggcgatg gccgtcctgc ccggctgatc ggccgtctcg ctgtagctta tggtccggcc
     3721 ggcatgatcc gggcccggtt ccaggcgcgc gccgccctga ttggcaatct cctggccgtc
     3781 cagcagccag cgggcggtga tcgccgcctc gccaagtgct gcattgcagg cccagagccc
     3841 gccttccgcc agcaggaggg aggccgatcc gtcggcatca cgcaggaccg gggggaccag
     3901 gcaaagcggg ccgcggctca gcgccgccac cgcgaccggg taatcgccgg caaggcgcgc
     3961 cggcgccgtg acgttcagga tcaggctgtc gccgttcctg cccagccccg aggccaccag
     4021 cccctcctcg gcggtcagca ggcggatctc gcaatcctgc ggcaggattt tcccgtgccg
     4081 gggccttgcg ccgctgccca tcgaaaaatg gatcatcagg ccagcgccac gatatcggtt
     4141 gcggtggtgc cgctggccca gatccgggtc gcgcggatcg ggaagggggc cccggcgatg
     4201 acgaagaccc ggccgatcgt gcccgacttc gtcgtgacct gcacgaagcc atccgccccg
     4261 gccgcgatgg cgcggctggt aaagtccaga tcggcctcgt cgcttggcgt gaccgtctga
     4321 agatggctgg cggggctttc gaggctggcg gcgtggtagt ggaaaagatc ggtcatgtcg
     4381 ggctcctcgg ccgtgcgcgc cggttgctgg ggccggatcg ggacggcatg tgaaaatcgg
     4441 aacgacacat tccgctaagg atggtggaga atgcgttacc ggggcgtgcg ctgcttggcc
     4501 cgatcaggca acggcgcccc ggccgcggcc ccttggggcc ggtcggattt ttcgcgatgg
     4561 cgctgaaaag gaacggaaac ggccatcggc ttttgaaata cgcgcatggc cgccttggcg
     4621 gctgcctggc cggacatgcg cgccgcgcag gcgcgcgccg ggacgcgaag ggcagaaggg
     4681 ccgctatcgg ccaaaggccg attctgcccg atcgcccctg ccgcaaccct gcaatcccgt
     4741 cttgacgggg gccgatgtcg cgaccagacc cgtgccgagc cgccccgatc gcgccttcag
     4801 acggatcctg tcatgcccca tcccgcccgc atcgcctatc tgaccgggga atatccggcc
     4861 atttcgcata ccttcatttt gcgcgaggtg ctggccctgc gggcaagggg cctcgaggtg
     4921 cggacctgtt cgatccgccg caccgccgcc gcgcagcacc gcggccccga cgagaaacag
     4981 gccgccgcca gcacgttcca tgttctcgac gcggcgaaac ggcccggcac gctgctggcc
     5041 gccctgggct gggcactggc gcggccggga cggttcggac gcatgatccg gctggcgctg
     5101 aagacccggc ccgccgggat caaggccacg atctggcaga tcttctacct gatcgaggcg
     5161 atggtgctgg cccggcatct ggaccgcgcg ggcatcaccc ggctgcacaa ccattttgcc
     5221 atggcctcgt cgaccgtggc catgctggcc tcggaattgt cgggcattcc ctacagtttc
     5281 acgctgcacg ggccggccga tttctgggaa accggccgct ggcatctggg cgaaaagatc
     5341 gcccgcgccc ggttcgtcgc ctgtatcagc catttctgcc gcagccaggg gatgctgttt
     5401 tccgatcccg cccactggga gcggctgcat atcgttcatt gcggcgtcga tccggaccgc
     5461 tacgacccgg cccatatccg ggatccgggg cgcgaggcgg gcaggaacgt gctgttcatc
     5521 ggccgcctgg ccgccgccaa gggcgtgccg atcctgctgg acgcctttgc ccggcttcat
     5581 gccgcccatc ccgatgcgcg cctgaccctg gtcggcgacg gcccggcccg gcccgttctg
     5641 gaggcgcggg cgcgcgatct gggcctgggc ggggcggtgc gcctgaccgg cgcgctgagc
     5701 caggacgagg tcacggccga actggcccgc gccgatctgt tcgcgctgcc ctccttcgcc
     5761 gagggcgtgc cggtcgtgct gatggaggcg atggcggcgg gcctgccggt c
//
LOCUS       DTVW01000570            1490 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1685138, whole
            genome shotgun sequence.
ACCESSION   DTVW01000570 DTVW01000000
VERSION     DTVW01000570.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1490)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1490)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1490
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1685138"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..680)
                     /locus_tag="EYO87_07530"
     CDS             complement(<1..680)
                     /locus_tag="EYO87_07530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65831.1"
                     /translation="MARGFWTGLLHGGVVSAAGLVALSLALPLPGTAPPATNPPETAG
                     SVPQDGAAKPAQATGDGPASADAVSAEPVSREAETRESGARASEADGSGQARTPTPPD
                     DAGPTERASATPAPDRPQAEGAPSAGAVDLPVGSEFGRGGDLAPQMPAPLAVPGSRMR
                     QSEAPAVAAPAAEPAPVALTGDNRRPQTEPARGPALASPEDDAGDAPDLTRPDAISAP
                     AAPAVPRMA"
     gene            795..1382
                     /locus_tag="EYO87_07535"
     CDS             795..1382
                     /locus_tag="EYO87_07535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013068066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate/anthranilate synthase
                     component II"
                     /protein_id="HIC65832.1"
                     /translation="MILLIDNYDSFTWNLVHYLGEAGAEVAVHRNDRIGVDEALSMDP
                     DGIVISPGPCDPAQAGICLDLIRAAAGRRIPLLGVCLGHQAIGEAFGGRIVRANRILH
                     GKVDAIDHDGSGVFAGLPSPLKATRYHSLTVQPESLPECLRVTATSDDGTIMGLIHAD
                     LPIEGVQFHPESIASEHGHDMIRNFLTRCRTKAAA"
     gene            1379..>1490
                     /locus_tag="EYO87_07540"
     CDS             1379..>1490
                     /locus_tag="EYO87_07540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009179283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate phosphoribosyltransferase"
                     /protein_id="HIC65833.1"
                     /translation="MSTDIRPLIGIAATRPLTGTEAETAFAALFDGAATPA"
BASE COUNT          206 a          551 c          516 g          217 t
ORIGIN      
        1 gccatcctgg gcaccgctgg cgcggcgggc gccgaaatcg catcgggccg cgtcaggtcc
       61 ggcgcgtcgc ccgcgtcatc ctcggggctg gcaagagcgg ggccccgggc cggttcggtc
      121 tgtggccggc ggttgtcgcc ggtcagggcg acgggtgcgg gttcggcggc gggtgcggca
      181 acggccggag cctcggattg ccgcatccgc gaccccggca cggccagcgg cgcgggcatc
      241 tgcggcgcaa gatcgccgcc gcgcccgaat tccgaaccca ccggcagatc gaccgcccca
      301 gccgagggcg cgccttcggc ctgcggccga tccggcgcgg gcgtggctga cgcccgttcg
      361 gtcggtccgg catcgtccgg tggcgtcggc gtccgggcct gcccggatcc gtccgcctcg
      421 gatgcgcggg ccccggattc gcgggtctcg gcttcccgag agacaggttc ggcagagacg
      481 gcatcggccg aggcgggccc gtcgcccgtc gcctgcgcgg gtttggcggc cccgtcctgc
      541 ggcacggagc cggcggtttc gggtgggttc gtcgcgggtg gggccgtgcc cggcaatggc
      601 agcgccaacg acagcgcgac cagaccggcg gcgctgacga cgccaccatg cagcaaacct
      661 gtccagaaac cgcgtgccat gcgccccttc acgtcccggc cgggcttgac cccccggcgc
      721 gctttggccc atctataacg aacccgcccg caagggggaa ccgcccccga accgcaccag
      781 cccgaggccg cccgatgatc cttctgatcg acaattacga cagcttcacc tggaacctcg
      841 tgcattatct gggcgaggcc ggggccgagg tggccgtcca ccgcaacgac cgtatcggcg
      901 tggacgaggc gctgtcgatg gatcctgacg gcatcgtgat ctcgcccggt ccctgcgatc
      961 cggcgcaggc ggggatttgt ctcgacctga tccgcgcggc agccgggcgc cggattcccc
     1021 tgctgggcgt ctgtcttggc catcaggcca tcggcgaggc tttcggcggc aggatcgtgc
     1081 gcgccaatcg catcctgcat ggcaaggtgg acgccatcga ccatgacggc agcggcgtct
     1141 tcgccggcct gccctcgccg ctgaaggcca cacgctatca ttcgctgacc gtccagcccg
     1201 aaagcctgcc cgaatgcctg cgcgtcaccg cgacctcgga tgacggtacg atcatgggcc
     1261 tgatccacgc cgacctgccc atcgagggtg tccagttcca ccccgaatcg atcgcctcgg
     1321 aacatggcca tgacatgatc cgcaactttc tgacccgctg ccggacgaaa gccgccgcat
     1381 gagcaccgac atccgtccgc tgatcggcat cgccgcgacc cggccgctga ccggaaccga
     1441 ggccgagacg gcctttgcgg cgctgttcga cggcgccgcg acgccggcac
//
LOCUS       DTVW01000571            1241 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1685605, whole
            genome shotgun sequence.
ACCESSION   DTVW01000571 DTVW01000000
VERSION     DTVW01000571.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1241)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1241)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1241
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1685605"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            51..503
                     /locus_tag="EYO87_07545"
     CDS             51..503
                     /locus_tag="EYO87_07545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010393447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HIC65834.1"
                     /translation="MKFLTIAAIAVTAALPLAAHAEQEEDVLQGRQGYMKLLSLNMAP
                     LAAMAKGEIDYDEAAASKAAANIEALTKYDIPPLFIEGTANGEMEGSDALPAIWEKPE
                     DFAMSYAALGEAASGASEAVKGGQANIGPVLQKLGGACKDCHDSFRKK"
     gene            503..1090
                     /locus_tag="EYO87_07550"
     CDS             503..1090
                     /locus_tag="EYO87_07550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome B"
                     /protein_id="HIC65835.1"
                     /translation="MGRSREARKIRVWDPALRFYHWTLALLVVVNWLLGQFGPNVMTL
                     HFSLGYAILALLVFRIIWGFVGPAPARFGTFLRGPSAVAGYLRHVLDRTPSHWFGHNP
                     LGALSVIAMLLALIWQVGTGLISDPEDFVNVGPLAGDVPGWLSRKAVGWHSLGGSIVL
                     ILLFLHVAMILFYRLWKNEDLVRPMITGWKWVRMR"
BASE COUNT          212 a          379 c          417 g          233 t
ORIGIN      
        1 ctgccagtat cggcgccacg aaggccagat atttcaacag ggaaacagcc atgaaattct
       61 tgaccatcgc ggccatcgcc gtcacagccg ccctgcccct tgccgcccat gccgagcagg
      121 aggaagacgt tctccagggg cgacagggct atatgaagct gctgtcactg aacatggcgc
      181 ccctggccgc gatggcaaag ggcgagatcg actatgacga ggccgcggcc tcgaaagccg
      241 ccgccaatat cgaggcactg acgaaatacg acattccgcc gcttttcatc gagggcaccg
      301 ccaatggcga gatggaggga tccgacgcgc tgccggcgat ctgggaaaag cccgaagact
      361 tcgccatgtc ctatgccgcc ctcggagagg ccgcgagcgg cgcctcggag gcggtgaagg
      421 gcggacaggc caatatcggc ccggtcctgc aaaagctggg cggcgcctgc aaggattgtc
      481 acgacagctt ccgcaagaag taatgggccg gtcccgcgag gcgcgcaaga ttcgggtctg
      541 ggatcccgcg ctgcgattct atcactggac actggcgctg ctggtggtcg tgaactggct
      601 tctgggccag ttcggcccga acgtgatgac actgcatttt tcgctgggat acgcgatcct
      661 cgcgttgctg gtctttcgca tcatctgggg ctttgtgggt ccggcgccgg cgcgctttgg
      721 caccttcctg cgcggaccct cggccgtggc gggctatctg cgccatgtcc tggatcgcac
      781 ccccagtcat tggttcgggc ataatccgct gggcgcgctg tctgtcatcg ccatgcttct
      841 tgcgctgatc tggcaggtcg gaacgggatt gatttcggac cccgaggatt tcgtgaatgt
      901 cggtccgctg gccggggacg tgccgggatg gctgtcgcga aaggcggtcg gctggcacag
      961 cctcggcggc agcatcgtgc tgatcctgct gtttctgcac gtggcgatga tcctgttcta
     1021 ccgattgtgg aagaacgagg atctggtccg cccgatgatc acgggctgga aatgggtccg
     1081 gatgcgctga ccggcgccgc agaggtcggc cggaccgcga ttcagtcgaa cttgtgattg
     1141 cggggaaagc cgcggggggc catgcgcccg gcgccggcgc gcttgcccag ccaatccgcg
     1201 ctgcgcttga gcgccgcatc gtcgagcacc tggtcgcgga a
//
LOCUS       DTVW01000572            3249 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1685846, whole
            genome shotgun sequence.
ACCESSION   DTVW01000572 DTVW01000000
VERSION     DTVW01000572.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3249)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3249)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3249
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1685846"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..575)
                     /gene="thyA"
                     /locus_tag="EYO87_07555"
     CDS             complement(<1..575)
                     /gene="thyA"
                     /locus_tag="EYO87_07555"
                     /EC_number="2.1.1.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008554660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidylate synthase"
                     /protein_id="HIC65836.1"
                     /translation="MRQYLEALTTVLEQGVESTDRTGTGTISHFGLQCRYRLAEGFPL
                     VTTKKLHLRSIIHELLWFLSGETNIAYLRENGVSIWDEWADEKGDLGPVYGHQWRHFP
                     MIRQGPEGPVAGEIDQIATLVETIRTTPDSRRLIVTAWNPGDIDRMALPPCHTLWQVR
                     IAGGKMHLQLYQRSADMFLGVPFNIASYALLL"
     gene            706..1134
                     /locus_tag="EYO87_07560"
     CDS             706..1134
                     /locus_tag="EYO87_07560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010395985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactoylglutathione lyase"
                     /protein_id="HIC65837.1"
                     /translation="MTIRYLHTMCRVKDLDKTMDFFRLLGLEETRRIDNDKGRFTLVF
                     MAPPGQPETPVELTYNWDGDDGLPSDSRHFGHLAYRVGNIYEMCQKLMDAGVTINRPP
                     RDGHMAFVRSPDNISIELLQDGDALPSQEPWASMDNTGHW"
     gene            complement(1177..1701)
                     /locus_tag="EYO87_07565"
     CDS             complement(1177..1701)
                     /locus_tag="EYO87_07565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018300962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HIC65838.1"
                     /translation="MLRHATQYDRSSISAAAPEEASELAEAYLESLQLLERMHRLMLD
                     LVKDEFERLNRNDLTPVQAMILYNLGEAEVSAGELRSRGMYQGSNVSYNLKKLVTMGY
                     VHHERSDLDRRSVRVRLTPEGIAVRETVHQLFIRHAEGLALSGVLEDPPLEQVNLQSR
                     RIERFWTEQIRYIY"
     gene            complement(1780..2028)
                     /locus_tag="EYO87_07570"
     CDS             complement(1780..2028)
                     /locus_tag="EYO87_07570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018303452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase assembly factor 2"
                     /protein_id="HIC65839.1"
                     /translation="MRSWRRGMKEMDLILGCFADRNLPDLPDPLLRKYEDLLLENDQD
                     LYLWVTARLAPVADGRRGPAGFSDILDRIAASAATRPR"
     gene            complement(2063..2419)
                     /locus_tag="EYO87_07575"
     CDS             complement(2063..2419)
                     /locus_tag="EYO87_07575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007798036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HIC65840.1"
                     /translation="MEDGHGYGDGEATLGDRLTAAREGAGLEVGELAARLGVRTETLE
                     GWESDQAEPRASLLGRLSGILGVSLIWLMTGDGRGPSTGESGPGAIAAELRDLRRLLN
                     EAARRMDRIEDLLACD"
     gene            2493..>3249
                     /locus_tag="EYO87_07580"
     CDS             2493..>3249
                     /locus_tag="EYO87_07580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008557935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HIC65841.1"
                     /translation="MAFISDRMARIKPSPTMAMTARAAELRAEGRDVISLSAGEPDFD
                     TPVHIREAAKAAIDAGHTRYTVVDGMPSLKRAIAAKFARENGLDYAPAQITVGTGGKQ
                     ILFNALMATLDQGDEVIVPAPYWVSYPDMVLLAGGRPVVIECGIEHGFRLTPDALEAA
                     ITPRTKWLILNSPSNPSGAGYSRTRIQALSDVLLRHPHVWILSDDIYEHLVFDGFEFA
                     TPAQVEPRLKNRILTMNGVSKSYAMTGWRIGYGA"
BASE COUNT          622 a         1068 c          967 g          592 t
ORIGIN      
        1 agaagcagcg cgtaggaggc gatgttgaac ggcacgccca ggaacatgtc ggccgaacgt
       61 tgatacagtt gcagatgcat cttgccgccc gcgatccgga cctgccacag cgtgtgacag
      121 ggcggcaggg ccatgcggtc gatgtcgccg ggattccacg ccgtcacgat cagacgcctg
      181 ctgtcgggcg tcgtgcggat cgtctcgacc agggtcgcga tctggtcgat ctctccggcg
      241 acaggcccct cagggccttg ccgaatcatg ggaaaatgcc gccattgatg gccatagacg
      301 ggtccgagat cgcccttttc atcggcccat tcgtcccaga tcgaaacgcc gttctcgcgc
      361 agataggcga tattcgtctc gcccgacaga aaccacaaaa gttcgtggat gatggatcgc
      421 aggtgcagtt tcttggtcgt gaccagcgga aatccctcgg ccaaccgata gcggcattgc
      481 agcccgaaat gcgagatcgt gccggtgccg gtgcggtcgg tggattcgac gccctgttcc
      541 agcaccgttg tcagcgcctc cagatattga cgcatcgccc ctcccgtgtt caccgtgaca
      601 cctgatgtcg catgagtatc cgcgaaggtc cagcatttgc acccaaggcg aggtggtgcc
      661 acattgccgg ccaacggcac gatgccgcga cagaaaggaa accgcatgac cattcgctat
      721 ctgcatacga tgtgccgcgt gaaggatctg gacaagacga tggatttctt ccgcctgctg
      781 gggctggagg aaacccgccg catcgacaac gacaagggtc gcttcaccct ggttttcatg
      841 gcgccgccgg gacaaccgga aacgccggtc gaactgacct ataactggga cggcgacgat
      901 ggcctgccct cggacagccg gcatttcggc cacctggcct atcgtgtcgg caatatctac
      961 gagatgtgcc agaagctgat ggatgcaggc gtcacgatca accgcccgcc ccgcgacggc
     1021 cacatggcct tcgtgcgcag tcccgacaac atctcgatcg agcttttgca ggatggcgac
     1081 gcgctgccat cgcaggagcc ctgggccagc atggacaata ccggccactg gtgagggacc
     1141 gatggcggcg cggaccaggc ccgcgtcgct gttcggtcag tagatatagc ggatctgctc
     1201 ggtccagaat cgctcgatcc ggcggctttg aagattgacc tgttccagcg ggggatcctc
     1261 cagcacgccg gacagggcca ggccttcggc atggcgaatg aacaactggt gcaccgtttc
     1321 gcgcaccgcg attccctcag gcgtcagcct gacccggacc gaacggcgat ccaggtccga
     1381 acgttcatgg tggacatagc ccatcgtcac cagcttcttc agattgtagc tgacattgct
     1441 gccctgatac atgccgcgtg atcgcaattc gcccgcgctg acctcggcct cgcccagatt
     1501 atagaggatc atggcctgca ccggcgtcag atcgttgcgg ttcagacgct cgaattcatc
     1561 cttcaccaga tccagcatca accgatgcat ccgttcaaga agttgcagcg attccagata
     1621 ggcttcggcc agttcgctgg cctcttccgg cgcggcggca gagatcgagc ttcggtcata
     1681 ttgtgtggca tggcgcagca tggcaggtcg ttcccgtctg tctttcatga tctgcaagat
     1741 gacagacaaa agagaatctt ccgtaaacgg cgaaccttct tatcggggcc gagtcgcagc
     1801 acttgcggcg atgcggtcca gaatgtcgga aaaacccgcc ggaccgcgtc tcccgtctgc
     1861 gaccggcgcc agccgcgcgg tgacccacag atacaggtcc tgatcgtttt ccagcagcaa
     1921 atcctcgtat ttccgtaaca ggggatcggg cagatcgggc aaattcctgt cggcgaagca
     1981 gcccagaatc aggtccattt ccttcatgcc gcgccgccag cttcgcatcc gcaaccgccg
     2041 cagccgtatc tcgggtgttt cctcagtcac aggccagcaa atcctcgatc cggtccatgc
     2101 gccgcgctgc ttcgttcagc aaacggcgaa ggtcgcgcag ctcggcggcg atggcacccg
     2161 ggcccgattc gcccgttgaa ggcccccttc cgtcgccggt catcagccat atcagcgaga
     2221 cgccaagaat tccggacagc ctgcccagca acgacgcgcg cggctcggcc tgatcgcttt
     2281 cccagccctc cagcgtctcg gtccgcacgc ccaggcgcgc agccagctcc ccgacttcca
     2341 gccctgcacc ctcacgcgcg gcggtcagac ggtcgcccag cgtcgcctcg ccgtcaccat
     2401 atccatgccc gtcttccatg ttcaccccgc ttgtggcttt tgcgcgcaca ccgtaagcca
     2461 tgcgaagacg cagatcaaac cagaggcccc cgatggcgtt catttccgac cgaatggcgc
     2521 gtatcaagcc gtcgccaacc atggccatga ccgcccgcgc ggccgaattg cgcgccgagg
     2581 ggcgcgacgt catcagcctg tcggcgggag agcccgattt cgacacgccc gtccatatcc
     2641 gcgaggccgc caaggcggcg atcgacgccg gccacacgcg ctataccgtc gtggatggca
     2701 tgccttcgct gaaacgcgcg atcgccgcaa aattcgcgcg cgagaacggc ctggactatg
     2761 cccccgcgca gatcacggtc ggcaccgggg gcaagcagat cctgttcaat gcgctgatgg
     2821 caacgctgga tcagggcgac gaggtgatcg tgccggcgcc ctactgggtc agctaccccg
     2881 acatggtcct gctggcgggc ggaaggccgg tcgtgatcga atgcggtatc gagcacggct
     2941 ttcgcctgac gccggacgcg ctggaggcgg cgatcacgcc gcgcacgaag tggctgatcc
     3001 tgaattcgcc ctcgaaccca tcgggcgcgg gctattcgcg cacgcggatc caggcgctga
     3061 gcgatgttct gctgcgccat ccccatgtct ggatcctcag cgacgacatt tacgaacatc
     3121 tggtctttga cggcttcgaa ttcgccaccc cggcccaggt cgagccgcgg ctgaagaacc
     3181 gcatcctgac catgaacgga gtcagcaagt cctatgcgat gaccggctgg cgaatcggat
     3241 atggcgcgg
//
LOCUS       DTVW01000573            2353 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1685974, whole
            genome shotgun sequence.
ACCESSION   DTVW01000573 DTVW01000000
VERSION     DTVW01000573.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2353)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2353)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2353
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1685974"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1499
                     /locus_tag="EYO87_07585"
     CDS             <1..1499
                     /locus_tag="EYO87_07585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006819519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase family protein"
                     /protein_id="HIC65842.1"
                     /translation="VSDLAAAEAVNFPRIASKDELLQAFNTLLTQTPQFIDNELVGLP
                     FSALVVGIDPTQSGMTLFRLPMFNEKMSDILNEWNTYLGSSASNWVFGTEGEQWLSSA
                     AKKSYQFEVWQKDSETLPYWTSWNSFFTRQFKDKDASRPVAAADSNRIVVSANDGSLF
                     RWDENIAAQDVFWFKDMLYSLSNILSSELPDQQKIIDDHKLIDLFTDGSIFQTYLNPY
                     NFHRWWCPVNGQVLFDPLAVPGYFFNKLVIPDFAGATTASLPYLAQVNARGIMVIKTP
                     DYGYVCCIPLGMSEVSSIVFDAAMTGNPQVSKGQEMGKFEYGGSSFALIFQKIPGKRL
                     IFQNAAGDVYQKQPVLPKGSASTGGNITLIGSQIGQWQDVVHDIAADLPWQSIGYVNE
                     GDAYALKYVGNLWTANPGIDDGNLYDANGSSLTATQPAYAMVGAPEGALIGRIGTNPP
                     FLVGDGAITPKGQTGLLQLVINDDLAGKYGAGLTDNEGQVSVAVTPAG"
     gene            complement(1797..>2353)
                     /locus_tag="EYO87_07590"
     CDS             complement(1797..>2353)
                     /locus_tag="EYO87_07590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014873811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="class II fructose-bisphosphate aldolase"
                     /protein_id="HIC65843.1"
                     /translation="AIDAGFTSVMYDGSRMPLARNIDETATIVEMAHAAGVSCEGEIG
                     FVGYADGDASAGTDPTEAAEFARATNVDAMAISVGNVHLQRNKEGGLDEARIRAIEAR
                     TDVPLVIHGGSGVPVTQRRALARNSKVCKFNIGTELRMAFGQALRQAVMQDPDRFDRV
                     QILRDIHDPLVTATRSVLKAFKKE"
BASE COUNT          479 a          716 c          682 g          476 t
ORIGIN      
        1 acgtgtccga cctggcggcg gccgaggctg tcaatttccc gcgtattgcc agcaaggatg
       61 agcttttgca ggcattcaac accctgctga cccagacacc gcaattcatc gacaacgaac
      121 tggtcggatt gccgttttcc gcgcttgtcg tgggaatcga cccgacccag agcggtatga
      181 ccctgttccg cctgccgatg ttcaacgaaa agatgtcgga tatcctgaac gaatggaaca
      241 catatctggg cagttcagcc tcgaactggg tgttcggcac cgaaggcgaa caatggctgt
      301 catcggctgc gaagaaatcc tatcagttcg aggtatggca gaaggacagc gaaaccctgc
      361 cctattggac cagctggaat tcctttttta cccgccagtt caaggacaag gacgcctcgc
      421 gtccggtcgc cgccgctgac agcaaccgga tcgtcgtcag cgccaatgat ggctctctgt
      481 tccgatggga cgagaacatc gcagcccagg acgtgttctg gttcaaggac atgctgtatt
      541 cgctgtccaa tatcctgtcg tccgagcttc ccgatcagca aaagatcatt gacgatcaca
      601 agctgatcga tctttttacc gacgggtcca tctttcagac ctatctgaac ccctacaatt
      661 ttcatcgctg gtggtgcccg gtgaacggac aggtcctgtt tgatccgctg gccgttccgg
      721 gatatttctt caacaagctg gtgatccctg atttcgccgg cgccacgacc gcttcgctgc
      781 cctatctggc gcaggtgaat gcccgcggaa tcatggtcat caagaccccc gattatggct
      841 atgtctgctg cattccgttg ggaatgagcg aggtatcatc gatcgtgttc gatgcggcaa
      901 tgaccgggaa tccgcaggtc agcaagggcc aggaaatggg caaattcgaa tatggcggat
      961 cttcctttgc gctgatcttc cagaagatac cgggcaagcg gctgatcttt cagaatgccg
     1021 caggagacgt ctaccagaag cagcccgtcc tgcccaaggg cagcgccagc accggcggga
     1081 acatcaccct gatcgggtcg cagatcgggc aatggcagga tgtcgtccat gatatcgctg
     1141 ccgatctgcc atggcagagc atcggctatg tcaatgaagg cgacgcctat gcgctgaaat
     1201 atgtcggcaa tctgtggacg gcaaatcccg gtatcgacga tggcaacctt tatgacgcga
     1261 acgggtccag cctcaccgcg acccagcctg cctatgcgat ggtcggggcg ccggagggtg
     1321 cgctgatcgg gcggatcggg accaatccgc cgttcctcgt cggcgatggc gcgatcacgc
     1381 ccaagggtca aaccggtctg ctgcaactgg tcatcaacga cgaccttgcc ggtaaatatg
     1441 gcgcgggact gaccgacaac gaaggccagg tctcggtcgc ggtcactccg gccggataac
     1501 gccgcccgtt gccgtccgac aacaaaggca agctcgccct gtcgatggcc tgcgctggat
     1561 ccggcgcaac atcctgaagg ccgacccggc ggtgcaagac tgcagattgt atccgcaatc
     1621 tgcgcagaat gaactgcacg tcttcaaaga aggtttcgcc ggcggcaata tcccgatgct
     1681 cgcgcaagcg acgcttcagc aaacgaaggc ggatcgccca ggaccgacct cactgctgtc
     1741 ggcttgggcg atggacgggt cgtgcccttg atccgggaag tcggtcttga ggtccatcac
     1801 tctttcttga aagccttcag cacgcttcga gtcgccgtca ccagcggatc atgaatgtcc
     1861 ctgaggatct gcacacggtc gaagcgatcg ggatcctgca tgactgcctg tcgcaatgcc
     1921 tgcccaaagg ccatgcgcag ttccgttccg atgttgaact tgcagacctt tgagttgcgg
     1981 gccagtgccc gccgctgcgt caccggcacg ccggagccgc cgtgaatgac cagcggcaca
     2041 tctgtcctgg cctcgatcgc gcggatccgg gcttcgtcga gaccgccctc cttgtttcgc
     2101 tgcaggtgaa cgttgccgac ggaaatggcc atggcatcga cgttggtcgc ccgcgcgaat
     2161 tccgccgcct cggtcggatc cgtgccggca gaggcgtcgc cgtcagcata tccgacaaaa
     2221 ccgatttcgc cctcgcagga cacgcccgcc gcgtgggcca tctcgacgat ggtcgcggtc
     2281 tcatcgatgt ttctggcaag cggcatgcgc gagccgtcgt acatgaccga agtgaacccc
     2341 gcatcgatgg cca
//
LOCUS       DTVW01000574            3387 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1687599, whole
            genome shotgun sequence.
ACCESSION   DTVW01000574 DTVW01000000
VERSION     DTVW01000574.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3387)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3387)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3387
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1687599"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            210..1871
                     /locus_tag="EYO87_07595"
     CDS             210..1871
                     /locus_tag="EYO87_07595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HIC65844.1"
                     /translation="MGLAGPYLAARLATVENDFKAAARYYFQAVAHDPGDSYLQDNAL
                     LAMVSAGEIDRAVELADRMRGDGQPTELSALLVQAKMVRDGDWAGLVEAIAPGGKTDD
                     GNRLMDGLVRAWALLGDGKAQDALTAFEDLAKLPGVGPVVNYQLALARALVGDYEGAE
                     TLLAEPATGGHLPGIVARAQILAQLERRDEAVAMLDDIPNIEAEPQLLALRDRLATGK
                     PVPFDVVKAPADGIAQIFLTFATALASSPEPEPLSLIHARLASWLAPDNAEARLVTAQ
                     LLQEREQFDLAEPEFEALRRMGQMRPVAELARIDALSRADREDEAEKAALSLTAAYPD
                     LPQGWIALGDLLRQQERFAQAVPAYDKALALLKDGPDEARWFPLYARGIALERSKQFD
                     RAEADLLAAIEINPDQASLLNYLGYSWIDRNENLDRGLDMIQKAAELSPGDGYILDSL
                     AWAYYRLGRYDEAVAPMEEAVGSMASDPLVNDHLGDIYWMVGRHREAEIQWQRALSLK
                     PTETGDVDPDRIRAKLDRGLDAVLRDEARTGENETPVPQAEAASR"
     gene            1873..2691
                     /locus_tag="EYO87_07600"
     CDS             1873..2691
                     /locus_tag="EYO87_07600"
                     /EC_number="2.7.1.148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008030981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase"
                     /protein_id="HIC65845.1"
                     /translation="MIFEAARAKLNLALHVTGRREDGYHLLDSLVAFADIGDRVALMP
                     GPLSLKIDGPFADDLSVGNNLCLDAARLAGGAAQITLTKILPVASGIGGGSADAAAVL
                     RGLARMGHPMPADPWRLGADVPVCIASVPARMAGIGEKVTPLPALPPVPLVLVNPGCP
                     VATPQVFSALTCRENSPLPPIPAFADRAALIGWLRGTRNDLETPARTIAPVIGTVLRT
                     LDATGAAFTRMSGSGATCFGLFDSVARARASVETLKQHGWWAVVSELAPRPAPG"
     gene            2722..>3387
                     /locus_tag="EYO87_07605"
     CDS             2722..>3387
                     /locus_tag="EYO87_07605"
                     /EC_number="2.6.99.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011746769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxine 5'-phosphate synthase"
                     /protein_id="HIC65846.1"
                     /translation="MLRLGVNIDHVATIRNARGTPWPDPLRAARIAQEAGADGITAHL
                     REDRRHISDRDIDALMEHLTLPLNLEMAATPEMQAIALRHRPHAVCLVPEKRQERTTE
                     GGLDVAGNDNAIGDFIAPLREAGCRVSLFIGHDAAQIEAAARIGASVVELHTGAYCDH
                     DTEGRTAERDAELSGLAEGARLAASLGLEVHAGHGLTFDTVGPIAALPQIAELNIGHF
                     LIAE"
BASE COUNT          533 a         1148 c         1158 g          548 t
ORIGIN      
        1 agacccgctt gaaccttgcc ctgatcgccg cgctgagcgc cgcgaccctg cctgcggttt
       61 ccgccgtcgc gcaggggcgg cccgaaccgc gcccggtcca ggcccagacg cctgtcgaaa
      121 ccctgccgca gccgcctgtc gattccctgc ccgcggctga acctgcccag gcagatgccg
      181 ccgggggccg cgcacccgca cctctgacca tgggtctggc aggcccctat ctggcggcgc
      241 ggctggcgac ggtcgaaaat gatttcaagg ccgccgcgcg ctattatttt caggctgtgg
      301 cgcatgatcc gggcgacagc tatctgcagg acaacgcgct tctggcgatg gtctcggccg
      361 gcgagatcga ccgggcggtg gaactggctg accggatgcg cggcgatggc cagccgaccg
      421 agctctcggc tctgcttgtg caggcgaaga tggtcaggga tggcgactgg gccggccttg
      481 tcgaggcgat cgctccgggc ggcaagaccg acgacggcaa tcgccttatg gacgggctgg
      541 tgcgggcctg ggcgctgctg ggcgacggca aggcgcagga cgcgctgacc gccttcgaag
      601 acctcgccaa gcttcccggc gtcggcccgg tggtgaacta ccagcttgcg ctggcccgcg
      661 cgcttgtcgg cgactacgag ggcgccgaga cgctgctggc ggaaccggcg actggcgggc
      721 atttgccggg aatcgtcgcg cgggcccaga ttctggcgca actggaacgc cgcgacgagg
      781 cagtggcgat gctggacgat atccccaata tcgaggccga accgcaattg ctggccctgc
      841 gcgaccggct ggccacgggc aagccggttc ccttcgatgt ggtcaaggcg cctgccgacg
      901 ggatcgcgca gattttcctg accttcgcaa ccgcgctggc cagcagccca gaacccgagc
      961 cgctgtcgct gatccatgcg cggctggcca gttggcttgc gcccgacaat gccgaggcgc
     1021 ggctggtgac ggcacagctt ttgcaggagc gggagcaatt cgatctggcg gaacccgaat
     1081 tcgaggcgct gcgccggatg gggcagatgc gcccggtcgc ggaactggcc cggatcgacg
     1141 cgctgtcccg cgccgatcgc gaggacgagg ctgaaaaggc cgcgctgtcc ttgaccgccg
     1201 cctatcccga tctgccgcag ggctggatcg cgcttggcga tcttctgcgt cagcaggaaa
     1261 ggttcgccca ggcagtgccg gcctatgaca aggcgctggc gctgctgaag gatggccctg
     1321 acgaggcacg ctggttcccg ctttacgcgc gtggcatcgc gctggaacga tcgaagcagt
     1381 tcgaccgcgc cgaggccgat ctgcttgcag ccatcgagat caatcccgac caggccagct
     1441 tgctgaatta tctcggctat tcctggatcg accggaacga gaacctggat cgcggactgg
     1501 acatgatcca gaaggccgcc gaattgtcgc cgggcgacgg atacatcctc gattctctgg
     1561 cctgggccta ttaccggctg ggccgctatg acgaggcggt cgcgccgatg gaagaggccg
     1621 tgggctcgat ggcctcggac ccgctggtga acgatcatct gggcgatatc tactggatgg
     1681 tgggccgcca tcgcgaggcc gagatccagt ggcagcgcgc gctgtcgctg aaaccgaccg
     1741 agaccggaga tgtcgatccc gaccggatcc gcgccaagct ggatcgcggg ctggacgcag
     1801 tgttgcgcga cgaggccagg accggcgaga acgagacccc cgtgccgcag gccgaagccg
     1861 ccagccgata gcatgatctt cgaggccgcg cgggccaagc tgaaccttgc cctgcatgtc
     1921 accggccggc gcgaagacgg ctatcacctg ctggattcgc tggtcgcctt cgccgatatc
     1981 ggcgatcgcg tcgcgctgat gccggggcct ctgtcgctga agatcgacgg tcccttcgcg
     2041 gacgacctgt cggtcggcaa caacctgtgc cttgacgcgg cccgtctggc aggcggtgcg
     2101 gcacagatca cgctgaccaa gattctgccg gtcgcgtccg gtatcggcgg cggctccgcc
     2161 gatgcggctg cggtcctgcg cgggcttgcc cggatgggcc atccgatgcc ggccgatccc
     2221 tggcggctgg gcgctgatgt gccggtctgc atcgcttcgg tccctgcccg catggccggg
     2281 atcggcgaga aggtgacgcc gctgcccgcc ttgccgccgg tgccgctggt gctggtcaat
     2341 ccgggctgcc ccgtggccac gccgcaggtc ttttcggcgc tgacctgccg cgagaattcc
     2401 cccttgccgc ccatccccgc cttcgccgac agggcggcgc tgatcggctg gctacgcggc
     2461 acccgcaacg atctggaaac gccggcccgg accatcgcgc cggtgatcgg cacggtcctg
     2521 cggaccctcg atgcgaccgg cgcggcgttc acccgcatgt cgggttccgg cgcgacctgt
     2581 ttcggtcttt tcgacagcgt ggcgcgcgcg cgcgcatccg tggaaacgtt gaaacagcat
     2641 ggctggtggg cggtggtctc ggaactggca ccgcggcccg cgcccggata ggatagagcc
     2701 agcaacaggg gaaagatcga catgctgcgt ctcggcgtca atatcgacca cgtcgccacc
     2761 atccgcaatg cgcgcggcac gccctggcct gatccgctgc gtgcggcccg aatcgcgcaa
     2821 gaggccgggg ccgacgggat taccgcccac ctgcgcgagg atcgccgcca tatcagcgac
     2881 cgcgacatcg atgcgctgat ggaacacctg accctgccgc tgaacctgga aatggccgcg
     2941 acgcccgaga tgcaggcgat cgctctgcgt catcgtcccc atgctgtctg cctggttccc
     3001 gaaaagcgcc aggagcgcac gaccgaaggc ggtctggacg tggccggcaa cgacaatgcg
     3061 atcggcgatt tcattgcgcc gctgcgagag gcgggctgcc gtgtgtcgct gttcattggc
     3121 catgacgccg cccagatcga agccgccgcc cgcatcggcg cgtcggtggt ggaactgcat
     3181 accggcgctt attgcgatca cgacaccgaa ggccggaccg ccgaacgcga tgccgaattg
     3241 tccggtctgg ccgagggcgc ccgccttgcc gccagcctgg ggctggaggt ccatgccggc
     3301 cacggcctga ccttcgacac ggtcggtccc atcgccgccc tgccacagat cgccgaactg
     3361 aacatcggcc atttcctgat agccgaa
//
LOCUS       DTVW01000575            1116 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1691466, whole
            genome shotgun sequence.
ACCESSION   DTVW01000575 DTVW01000000
VERSION     DTVW01000575.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1116)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1116)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1116
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1691466"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            206..988
                     /locus_tag="EYO87_07610"
     CDS             206..988
                     /locus_tag="EYO87_07610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013068698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HIC65847.1"
                     /translation="MKSAPSYFDIRIATSERDLKAAQRLRYRVFVEELGGDGALVDHE
                     ARLERDEFDPVVDHLCLIDTRRSAEDLDHVVGAYRLLPGSRAAEFGRFYCDAEYDLTP
                     LRQSGRSLLELGRSCVDPDYRGGSGMFLLWNALADYVLDLGIEVLFGVASFHGTDPAE
                     LAPSLSWLHHNHLAPLGLRPRARAAGFQPMDLIPPERLDRREALVSMPALIKAYLRLG
                     GLVGEGAFVDRAFNTTDVFLLMDTKAMSDKHRKFYESRWHGQ"
BASE COUNT          176 a          351 c          374 g          215 t
ORIGIN      
        1 atagacggcc ggcgggtcgt tctggatatc gtctggacgc gggattcgtg aagtctttca
       61 atcatgaacg tcgttctgca accaagggtt gtatccctca agccttaccc ggagtcaacc
      121 gccgcacgcc gatccggcca tgttgcaatg atgccgcccc gcgcctagac aggccgcacc
      181 gccctgcaac aatccttcag gcttcatgaa gtccgccccc tcctatttcg acatccgcat
      241 cgcaacctcg gagcgcgatc tgaaggccgc acagcgcctg cgctatcgtg tcttcgtcga
      301 ggaactgggt ggcgatggcg cgctggtcga ccacgaggcg cggctggaac gcgacgaatt
      361 cgatccggtc gtcgatcatc tgtgcctgat cgacacccgc cgttccgccg aagacctgga
      421 tcacgtggtc ggcgcctatc gccttctgcc cggcagccgc gcggccgaat tcgggcgatt
      481 ctactgcgat gcggaatacg atctgacacc gctgcggcaa tcggggcgat cgctgctgga
      541 actgggccgg tcctgcgtcg atcccgatta caggggtggc tcggggatgt tcctgctgtg
      601 gaacgcgctg gccgattatg tgctggatct ggggatcgag gtgctgttcg gcgtggccag
      661 tttccacggc accgacccgg ccgaactggc accctcgctg agctggctgc atcacaacca
      721 tctggcgccg ttgggtctgc gcccgcgcgc gcgcgcggcg ggctttcagc cgatggacct
      781 gattccgccc gaacggctgg accggcgcga ggcgctggtg tcgatgccgg cgctgatcaa
      841 ggcctatctg cggctgggcg ggctggtggg cgaaggtgct ttcgtggacc gcgcgttcaa
      901 cacgaccgat gtgttcctgc tgatggatac caaggcaatg tcggacaagc atcgaaagtt
      961 ctatgaaagc cgctggcacg gccaatgagc gggccattgc gcgaggccac atggcgcgaa
     1021 ggcgcgcctc cggccttgcc gcgcccgcac ggcgtggcgg aatggtggcg ggtgatccgg
     1081 cgggctgtgc cggcattgct ggtgctgttg ctgggc
//
LOCUS       DTVW01000576            1539 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1693431, whole
            genome shotgun sequence.
ACCESSION   DTVW01000576 DTVW01000000
VERSION     DTVW01000576.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1539)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1539)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1539
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1693431"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..87
                     /locus_tag="EYO87_07615"
     CDS             <1..87
                     /locus_tag="EYO87_07615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017997926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D,D-dipeptide ABC transporter permease"
                     /protein_id="HIC65848.1"
                     /translation="LAIFIVSLAFNLLGDGLRDVLDPKGAKE"
     gene            84..968
                     /locus_tag="EYO87_07620"
     CDS             84..968
                     /locus_tag="EYO87_07620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007669758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIC65849.1"
                     /translation="MNAPLLSVRDLRVAFPTRQGMFEAVRGVSFDLGRERLGVVGESG
                     SGKSMTGRAILGLVRPPGRVTARRMDLHGQPILNLSERKMRKIRGSRISMVMQDPKFS
                     LNPVMTIGDQIIEAYRLHAGGPKGAGRAKALEMLEAVQIRDPERVMGAYPHEVSGGMG
                     QRIMIAMMLAPDPEILIADEPTSALDVSVRTEVLNIMDRLVRDRGMGLIFISHDLNLV
                     AQFCDRVLIMYAGRIVETLAAKDLHAARHPYTQGLLNSLPRLDAPVERLPVLQRQDTW
                     RDGDPITESLETELPGGL"
     gene            1044..>1539
                     /locus_tag="EYO87_07625"
     CDS             1044..>1539
                     /locus_tag="EYO87_07625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017997928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HIC65850.1"
                     /translation="MLTVDDLNVWFGFAPDRVDAVQHAAFTVASGESFGLVGESGSGK
                     STILRAIAGLIDTWSGSIEVDGQAVTGTRRSRAFHKTVQMVFQDPYASLHPRHSVDAV
                     LSEALKLQGMDDIDARITRLLQDVGLGRGFRFRYPHQLSGGQRQRVAIARALAAEPRL
                     LLLDE"
BASE COUNT          257 a          500 c          516 g          266 t
ORIGIN      
        1 cttgccatct tcatcgtcag ccttgccttc aatctgctgg gcgacgggtt gcgcgacgtt
       61 ctggacccga agggcgcaaa ggaatgaacg cgccgttgct ctcggtccgg gatctgcggg
      121 tggcctttcc gacgcggcag ggcatgttcg aggcggtgcg cggcgtcagc ttcgacctgg
      181 ggcgcgaaag actgggcgtg gtgggcgaat ccgggtcggg caaatccatg accggccgcg
      241 cgatccttgg ccttgtccgt ccgccgggcc gggtcaccgc ccggcggatg gacctgcatg
      301 gccagccgat cctgaatctg tccgaacgca agatgcgcaa gatccgcggc agccggatca
      361 gcatggtcat gcaggatccg aaattcagcc tgaatccggt gatgaccatc ggcgaccaga
      421 tcatcgaggc ctatcggctg catgccggcg gcccgaaggg cgcgggccgc gccaaggcgc
      481 tggaaatgct ggaggcggtc cagatccgcg accccgaacg ggtcatgggc gcctatccgc
      541 acgaggtctc gggcgggatg ggtcagcgca tcatgatcgc gatgatgctg gcgcccgacc
      601 ccgagattct gatcgccgac gaaccgacat cggcgctgga cgtatcggtc cggaccgagg
      661 tgctcaacat catggaccgg ctggtccgcg atcgtggcat gggactgatc ttcatcagcc
      721 acgacctgaa cctggtcgcg caattctgcg accgggtgct gatcatgtat gccggacgca
      781 tcgtcgagac gctggccgcc aaggatctgc atgccgcccg ccacccctat acgcagggcc
      841 tgctgaacag cctgccgcgc ctcgatgcgc cggtcgaacg cctgccggtg ctgcaacgcc
      901 aagacacgtg gcgcgacggc gatccgatca ccgaaagcct tgaaaccgaa cttcccggag
      961 gcttgtgaca tggtcctgct tcggtccgga aatatcctgc gggggtgctg gggtgcaata
     1021 tcccggcccg cgccggtgcc gccatgctga cggtcgacga tctgaatgtc tggttcggct
     1081 ttgcgcccga ccgtgtggac gcggtccagc acgccgcctt caccgtggcc agcggcgaaa
     1141 gcttcggtct ggtcggcgaa tcgggcagcg gcaaatcgac gatcctgcgc gccattgcgg
     1201 gactgatcga cacctggtcg ggcagcatcg aggtggacgg gcaggccgtc accggaaccc
     1261 gccgcagccg cgcctttcac aagaccgtcc agatggtctt tcaggatccc tatgccagcc
     1321 tgcatccgcg ccattcggtc gatgcggtgc tgtccgaggc gctgaagctg caaggcatgg
     1381 acgatatcga cgcccgcatc acccggctgc tgcaggatgt gggactggga cgcggcttcc
     1441 gcttccgcta tccgcaccaa ttgtcgggcg ggcagcgtca gcgtgtggcc atcgcccgcg
     1501 cgctggcggc cgaaccgcgc ctgctgttgc tggacgaac
//
LOCUS       DTVW01000577            1253 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1693503, whole
            genome shotgun sequence.
ACCESSION   DTVW01000577 DTVW01000000
VERSION     DTVW01000577.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1253)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1253)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1253
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1693503"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            81..>1253
                     /locus_tag="EYO87_07630"
     CDS             81..>1253
                     /locus_tag="EYO87_07630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007426035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65851.1"
                     /translation="MGAANTPAYRGTAYVVFEELSLATYGNRLPQLSFEVFRPLADPD
                     TAEGLVKAVTMIPASGEFTYATEAVRKTVGATTTVFGQTIGGTTSAENLNALPDETDI
                     VVALDRLQAMAPAVESVSLVVAWFGNDLRAGNCTIKPGVEVATKVTSPKVWTVNGVSR
                     AAAHLVSRDAEDRPVYGGTPADFAVVQAIREMKARGLRVTFYPFLLMDVPPGNTLPHP
                     YSANAATPGQPSFPWRGRITCSPAAGYTGTADKTAAAATQVSTFFGAAAPAQFAVSGD
                     SVSWTGPAGDWGLRRMILHYAHLCAVAGGVDAFLIGSEMRGLTTIRSSASAYPAVTAF
                     KALAADVQSILGPGTKVGYASDWSEYFGHQPGDGTGDVFFHLDPLWSDANIDFIGID"
BASE COUNT          200 a          427 c          425 g          201 t
ORIGIN      
        1 cgctcgacat gagcggcatc acctggcgct ggtatcccgg cgacgaggcg cagacgcctg
       61 acccgttcat cgcggcaaag atgggagcgg ccaacacccc cgcctatcgc gggacagcct
      121 atgtggtctt cgaggaactg tcgctcgcga cctacggcaa ccgcctgcct caactgtcgt
      181 tcgaggtctt ccggccgctc gcggatcccg acacggccga ggggttggtc aaggccgtga
      241 ccatgatccc cgcatcgggc gagttcacct atgccaccga ggctgtccgg aagacggtcg
      301 gggcgacgac gacggtcttc ggccagacca tcggcggcac gacctcggca gagaacctga
      361 acgcgctgcc ggatgagacc gatatcgtcg tggcgctgga ccggcttcag gccatggccc
      421 ccgccgtcga aagcgtcagc ctcgtcgtgg cctggtttgg caatgacctg cgggcgggca
      481 actgtacgat caagccggga gtggaggtgg cgaccaaggt caccagcccc aaggtctgga
      541 cggtcaacgg ggtttcccgc gcggcagccc acttagttag ccgtgacgcc gaggatcggc
      601 cggtctatgg cggcacgcct gcggatttcg cggtggtgca ggcgatcagg gagatgaagg
      661 cgcgcgggct gcgggtgacg ttctatccct tcctgctgat ggacgtgccg cccggcaaca
      721 ccctgccgca cccctacagc gcgaatgccg cgacgccggg acagccgagt ttcccgtggc
      781 ggggccggat cacctgttcc ccggcggcag gctacactgg caccgcagac aagaccgccg
      841 ccgctgccac gcaggtctcg accttcttcg gcgcggccgc cccggcgcag ttcgcagtgt
      901 cgggcgacag tgtcagctgg accggccctg caggcgactg gggcctgcgg cggatgatcc
      961 tgcactacgc ccatctctgc gcggtggcgg gcggggtcga cgccttcctg atcggcagcg
     1021 agatgcgcgg cctgaccacg atccgctcca gcgccagtgc ctatccggca gtcaccgcct
     1081 tcaaggcgct ggcggcggac gtgcagtcga tcctcgggcc gggcaccaag gtgggctacg
     1141 cctccgactg gtcggagtat tttggacacc agccgggcga cggcacgggg gatgtctttt
     1201 tccacctcga cccgctctgg tcggacgcga acatcgactt catcggcatc gac
//
LOCUS       DTVW01000578            2220 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1695068, whole
            genome shotgun sequence.
ACCESSION   DTVW01000578 DTVW01000000
VERSION     DTVW01000578.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2220)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2220)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2220
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1695068"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            496..804
                     /locus_tag="EYO87_07635"
     CDS             496..804
                     /locus_tag="EYO87_07635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010395022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ETC complex I subunit"
                     /protein_id="HIC65852.1"
                     /translation="MRVRIYQPSRNAMQSGSRSRGWVLEFPQADPREIDPLMGWTSSD
                     DTQSQVRLRFQTRKQAEDYARDKGLDYVVHEPQKRAPNIRPRGYGENFATDRRAPWTH
                     "
     gene            1554..1739
                     /locus_tag="EYO87_07640"
     CDS             1554..1739
                     /locus_tag="EYO87_07640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65853.1"
                     /translation="MSERVPPTDAQQQISAYDRQLAEIDKLLGEARNYKAEARWYVWV
                     VASGGTLAIVAFAKLFL"
     gene            1910..2089
                     /locus_tag="EYO87_07645"
     CDS             1910..2089
                     /locus_tag="EYO87_07645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65854.1"
                     /translation="MYLMTERSGDRLRDGRVFGFRPKESIWHLKDVVEKAGIEHVTPH
                     ASGRHTFDSRLNEKG"
BASE COUNT          439 a          643 c          751 g          387 t
ORIGIN      
        1 gcgcttgtcg atgccccgga aggcgccgac gtcgctatcg aggtcaaccc gttcgggtcg
       61 gaaagctatg gcgcggcgct ggtcacggtg gcctacgaaa ccggaacgga ccggatgatc
      121 tgcatcttcg acaagcggga caagagcgcc cagatgaccg cgcccttcca ccctgggaat
      181 gccgcgccct gacgggccgc atccgccctt tcgcaagggc aggtccgaag gggctggcac
      241 ggcatgatcg tggattgctt ctgcggcgct atggccaggc cggccttccc gggtgcaatg
      301 ggtgatcttc caagcgccgg atgtcgcggc ccgaggcaat ctcttcggtg cccgcgtggc
      361 gcggatggga ctgtccctgc gcaccgcccc cgatgcgccg acgcccgcgc ggatcgcggt
      421 gcgtcgcagg gcttgatccg gggcggcgca ttggcgataa gcggcgaaag acatgtcgcc
      481 ggaaaggttc gatccatgcg cgtccgtatc taccagcctt cccgcaacgc gatgcaatcg
      541 ggatcgcgca gcaggggatg ggtgctggaa tttccgcagg ccgacccgcg cgagatcgac
      601 ccgctgatgg gctggaccag cagcgacgac acccagagcc aggttcgcct gcgcttccag
      661 acccgcaaac aggccgagga ttatgcccgc gacaagggcc tcgattacgt cgttcatgag
      721 cctcagaaac gcgcgcccaa catccgcccg cgcggctacg gcgaaaattt cgcgacagac
      781 cgccgcgcgc cctggacgca ttgacgccgt tgcagatcga ggcaaggttg gccccgctga
      841 cgcaaggtcg tcgggagcaa caaggatctg caggaccgcc tttttctttc tgaaacaaga
      901 cgatataaaa aataataccc aaatgcgtgg acacctaaag gtgtttgtag gatgtctctt
      961 tttgtcgata atggcggggt gattggcaaa aactggcaat atcaggcgag atgcgacccg
     1021 tccatggctg tctgtcagta tatccttttc agattttgga aggccgtctt gagccggagg
     1081 caggttcagc gataacgcga ttcgctagca tggggcggtg ggatcacggg gtcggggcgc
     1141 ataatgccct ggcggcgtgg cagagggcgc gggccatgcg gcgttccttc tgctctgcgg
     1201 tggtgatttg ccggccgaac taggcggcga tcagcgcggg aaccatgggc cagttgccgt
     1261 ggttcactgg cgaggacgtg atggacgggg acgacatcga cgttgccgcc tgcctgcgca
     1321 tcatcttcct ggggacgtgg agcaaggaca agagcgtcag catcaccgtc gagagggcgg
     1381 gctgatgcgc gggcagatac cgaacagctt ccagcgccat gcgctggagc acttgcccgg
     1441 tgccgtgatg acaggcaact gggtcaactg gcgaggccaa gcggtcatgt catgggccga
     1501 agtggacagg ctcgccaagg atgctacact ggcagggaaa ggaggccaca cacatgagtg
     1561 agagagttcc gccgactgat gcgcagcagc agatctcggc ctatgaccgg cagcttgcgg
     1621 aaatagacaa gcttttgggc gaggcccgca attacaaggc cgaggcccgc tggtatgtat
     1681 gggtcgtggc cagcgggggg acgctggcaa tcgtcgcctt cgccaagctg ttcctctagc
     1741 ctcaccaacg acagcacatc atggagcagc ccgcccctgc gagggggcgg gctgtttcgt
     1801 cgtgcgctgt gcacgattgc gaaggagacc aagcaatgaa gatcacactt tccgacacca
     1861 agctgttcgc cgctgccacc acgtcatggc ggggccaggg gatgggcgca tgtatctgat
     1921 gaccgaaagg tctggggatc gcctgcgtga cgggcgcgtg ttcgggttcc gcccgaagga
     1981 aagcatctgg catctgaagg acgtggtcga gaaggcgggg atcgagcatg tcacgcccca
     2041 tgccagcggc cggcacacgt tcgactctcg gttgaatgag aaaggctgat cggccaacga
     2101 gacatcggtc atgtccaagg cgtggtgtat ctgaggcggc catcgggttt gtcggtaggg
     2161 tcgggttgcg acggccaacc tgaaccgagg gatgaccccg atgaccaaac ccgtgacgga
//
LOCUS       DTVW01000579            1021 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1698448, whole
            genome shotgun sequence.
ACCESSION   DTVW01000579 DTVW01000000
VERSION     DTVW01000579.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1021)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1021)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1021
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1698448"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>1021
                     /locus_tag="EYO87_07650"
     CDS             <1..>1021
                     /locus_tag="EYO87_07650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008556070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65855.1"
                     /translation="PDDLVLRVQKALGKLGLYQGPVDGRMTAATRAAVRKYQSNSGVR
                     VTGRLDKKLVEGLENSFQVRLLLKRLDRVRIENMSAAREALLNHPATRDLVTGEKEAI
                     ADPTRDIAGCLENVTVRCLLTEALESAKAVYKPELRDWALGEILVAQARAGLGTDAMS
                     TASRIRDPRLIIVALRDIAEAQAVSGLNDRALAAADIISEPAKQAEALAAIADIQIKR
                     GDFAAAKITAARLLETLKKLPDPLARVSFQARSAVILDHAAEVSQAADILKKTETFAR
                     QSLGGTNLGVALRHVANAFAETEQLTQAMTILDDVTENSNRTPVLITAATKQARAGDA
                     AAALAT"
BASE COUNT          198 a          359 c          308 g          156 t
ORIGIN      
        1 cccgatgacc tggtcctgcg ggttcagaaa gcgctgggca agctgggtct ttaccagggc
       61 ccggtggacg gccgcatgac ggcggccacc agggccgctg ttcgcaagta tcagtccaac
      121 tccggcgtcc gggtgaccgg ccgcctggac aagaagctgg tcgagggcct ggaaaactcc
      181 ttccaggtcc gtcttcttct caaacgcctg gaccgggtgc gcatcgaaaa catgagtgcc
      241 gcgcgcgaag ccctgctcaa tcatcccgcg acgcgcgacc tggtgaccgg cgaaaaggag
      301 gccatcgccg acccgacccg cgatatcgcc gggtgcctgg aaaacgtcac cgtgcgctgt
      361 ctgctgaccg aggccctgga aagcgccaag gccgtttaca aaccggaact gcgcgattgg
      421 gcgttgggcg aaattctggt tgcccaggcg cgcgccggtc tggggacgga cgccatgtcc
      481 accgccagcc gcatccgcga cccccgcctg atcatcgtcg cccttcgcga catcgccgaa
      541 gcgcaggccg tctcggggct gaacgacagg gctctggccg ccgccgacat tatttccgag
      601 ccggcaaagc aggcggaagc gctggccgcc atcgccgata tccagatcaa gcgcggcgat
      661 ttcgccgccg ccaaaataac cgccgcgcgt ttgctcgaaa ccctgaaaaa acttcccgac
      721 ccattggcgc gggtgtcctt ccaggcccgc tccgcggtga tcctcgacca tgccgccgaa
      781 gtttcgcagg ccgccgatat tctgaaaaaa accgaaacct tcgcccgcca gtccctcggc
      841 ggcaccaacc tgggcgtggc gcttcgtcac gtcgccaacg cttttgcgga aaccgaacaa
      901 ctgacccagg ccatgaccat cctggacgac gtcacggaaa attcaaaccg caccccggtg
      961 ttaatcaccg ccgccaccaa gcaagcacgg gccggcgatg cggcggcggc gctggcgacc
     1021 g
//
LOCUS       DTVW01000580            1368 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1700262, whole
            genome shotgun sequence.
ACCESSION   DTVW01000580 DTVW01000000
VERSION     DTVW01000580.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1368)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1368)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1368
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1700262"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..292)
                     /locus_tag="EYO87_07655"
     CDS             complement(<1..292)
                     /locus_tag="EYO87_07655"
                     /inference="COORDINATES: protein motif:HMM:PF00145.15"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HIC65856.1"
                     /translation="MVLRPRHGLSLCAGGGGLDLGLMLAEPGYHTRAFVEWKDWPRTV
                     LIAAQRAGYFAPAPIWTDLRSFDALPFRGAFDAVLAGYPCQPFSAAGKRGGAD"
     gene            complement(298..1305)
                     /locus_tag="EYO87_07660"
     CDS             complement(298..1305)
                     /locus_tag="EYO87_07660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008031802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HIC65857.1"
                     /translation="MSHEATNWAIKQRGLKPTTKIVLWHLCDRFNPDYGCFPSQDRLA
                     HDCEISRSTLNDHLGQLEAVGLLRRVPRLDPVTKRQLPTRYILGFEPGFTPVAVVPCP
                     EIGHGDDGATESLDDADACDVDGMADALPCPDFGHGDEASPVSDFPAKPCPENAESRV
                     RNPDTNPVREPLSKPVKEEEGAQAREGVSNEVFGDLLDALGLVPAALPGWWQGWPPRL
                     HVQRWRDELGLTEAEIIAAAEASRQEHPEAPDGPKALDRAMQRAAQRKVEDAGRKRRK
                     PKTPPAAAAKPITDLPAFYADLVNSDRFLPVSAISNTMRDAMLARGLVTAERLRERGV
                     R"
     gene            complement(1302..>1368)
                     /locus_tag="EYO87_07665"
     CDS             complement(1302..>1368)
                     /locus_tag="EYO87_07665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015499455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="VRR-NUC domain-containing protein"
                     /protein_id="HIC65858.1"
                     /translation="GALADHGFTTRIAPPARRLAP"
BASE COUNT          212 a          448 c          477 g          231 t
ORIGIN      
        1 cgtcggcacc gccgcgcttt ccagccgcgc tgaagggctg gcaggggtat ccggcgagga
       61 cggcatcgaa cgcaccgcga aagggaaggg catcgaagct gcgcaggtcg gtccagatcg
      121 gggccggggc gaagtatccc gcgcgctggg cggcgatgag gacggtgcgc ggccagtcct
      181 tccattcgac gaaggcgcgg gtgtgatagc cgggttcggc gagcatgagg cccagatcaa
      241 ggcctccgcc gcctgcgcag agggacaatc cgtgccgggg acgaagcacc atgccattca
      301 ccgcaccccg cgctcgcgca ggcgttcggc cgtgaccagc ccccgggcca gcatggcgtc
      361 gcgcatcgtg ttgctgatcg cgctaaccgg cagaaaccgg tcggagttga ccagatcggc
      421 gtagaaggcg gggaggtcgg tgattggctt tgccgccgcg gcagggggtg tcttgggctt
      481 cctgcgcttc cgcccggcat cctcgacctt gcgctgggct gcgcgttgca tggcgcggtc
      541 cagtgccttc ggcccatcgg gcgcttcggg atgttcctgg cggctagcct cggccgcggc
      601 gatgatctcc gcctcggtca ggcccagttc gtcgcgccag cgctggacgt gcagccgggg
      661 cggccagcct tgccaccagc cgggcagggc ggcggggacg aggcccagcg cgtccagcag
      721 gtccccgaaa acctcattgg aaacgccctc gcgcgcttgc gcgccctcct cctcctttac
      781 tggtttactt agaggttccc ttacagggtt agtgtccgga ttccggacac ggctttcggc
      841 attttccgga cacggcttgg ccggaaaatc ggacacggga ctcgcctcat ccccgtgtcc
      901 gaaatccgga cacggcaagg cgtcggccat gccatccaca tcacaagcat cggcatcgtc
      961 gaggctttcc gtggcaccgt cgtccccgtg tccgatttcc ggacacggga ccacagccac
     1021 aggtgtgaat cccggctcga accccaggat gtagcgggtg ggcagttgtc gcttggtcac
     1081 gggatcgagc cgcggcaccc gccgcaacag gcccacggcc tccagctggc cgaggtgatc
     1141 gttcagcgtc gaccggctga tctcgcagtc gtgcgccagt cggtcctgtg aaggaaagca
     1201 cccgtaatca gggttgaacc ggtcgcagag gtgccagagc acaatcttgg tcgtgggttt
     1261 cagcccgcgc tgcttgatgg cccagttggt ggcctcgtgg ctcatggcgc gagcctccga
     1321 gcgggagggg cgatgcgcgt ggtgaagcca tgatcggcga gcgcgccc
//
LOCUS       DTVW01000581            1063 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1700770, whole
            genome shotgun sequence.
ACCESSION   DTVW01000581 DTVW01000000
VERSION     DTVW01000581.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1063)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1063)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1063
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1700770"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1063)
                     /gene="dnaE"
                     /locus_tag="EYO87_07670"
     CDS             complement(<1..>1063)
                     /gene="dnaE"
                     /locus_tag="EYO87_07670"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HIC65859.1"
                     /translation="PVGPGRGSGAGSLVAYALTITDLDPLRYNLLFERFLNPERVSMP
                     DFDIDFCMDRREEVIRYVQEKYGKEKVGQIITFGALLSKAAVRDVGRVLQLPFMQVDR
                     LSKMIPVEGVKPVSITRARAEEPRLREAAREEVIARLLDYAEKIEGLYRNASTHAAGV
                     VIGDRPLDRLVPLYRDPGSDMPATQFNMKWVEQAGLVKFDFLGLKTLTVIQNAVDLIN
                     AGGRPLHVTADGRELYRPPEGAENQINAIPLDDQASYDLFASARTVAVFQVESSGMMD
                     ALRRMKPTCIEDIVALVALYRPGPMENIPTYCEVKNGARALESIHPSIDHILAETQGI
                     IVYQEQVMQIAQVMAGYSLG"
BASE COUNT          189 a          350 c          325 g          199 t
ORIGIN      
        1 ccaaggctgt agccggccat gacctgcgcg atctgcatca cctgttcctg atagacgatg
       61 atgccctgcg tctcggccag gatatggtcg atgctgggat ggatcgattc cagcgcgcgc
      121 gcgccgttct tgacctcgca ataggtcggg atgttctcca tcgggccggg acgatacagg
      181 gccacgaggg ccacgatatc ctcgatgcag gtgggcttca tccggcgcag cgcatccatc
      241 atgccgctgc tttccacctg gaacaccgcg accgtgcggg cactggcgaa aagatcatag
      301 ctggcctggt cgtccagcgg gatggcgttg atctggttct cggcaccctc gggcggccga
      361 tacaattcgc ggccatcggc tgtgacatgc aggggccgcc cgccggcatt gatcagatcg
      421 accgcgttct ggatcacggt cagagtcttc aggcccagaa agtcgaactt gaccagcccg
      481 gcctgttcca cccatttcat gttgaactgc gtcgccggca tgtccgatcc gggatcgcga
      541 tacaagggca ccagccggtc cagcggccgg tccccgatca ccacccccgc cgcgtgggtc
      601 gaggcgttgc gatacagccc ctcgatcttt tcggcatagt ccagcagccg ggcgatcacc
      661 tcttcgcggg cggcctcgcg caggcgcggt tcttcggccc gcgcccgggt gatgctgacg
      721 ggcttcaccc cttcgaccgg gatcatcttg gacaggcgat ccacctgcat gaagggcagc
      781 tgcagaacac ggccgacatc gcgcaccgct gccttggaca gcagcgcgcc gaaggtgatg
      841 atctggccaa ccttttcctt gccgtatttc tcctgcacat agcggatcac ctcttcgcgg
      901 cgatccatgc agaaatcgat gtcgaaatcc ggcatgctga cccgttcggg gttcaggaag
      961 cgttcgaaca agaggttgta gcgcagcgga tccagatcgg tgatggtcag ggcataggca
     1021 acaagcgacc ccgcccccga gccgcgcccc ggtcccaccg gga
//
LOCUS       DTVW01000582            1835 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1701825, whole
            genome shotgun sequence.
ACCESSION   DTVW01000582 DTVW01000000
VERSION     DTVW01000582.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1835)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1835)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1835
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1701825"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..124
                     /gene="rplP"
                     /locus_tag="EYO87_07675"
     CDS             <1..124
                     /gene="rplP"
                     /locus_tag="EYO87_07675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002722499.1"
                     /note="located in the peptidyl transferase center and may
                     be involved in peptidyl transferase activity; similar to
                     archaeal L10e; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="50S ribosomal protein L16"
                     /protein_id="HIC65860.1"
                     /translation="HPGRIMFEIDGVSDTIAREALRLGAMKLPVLTRIVAREDW"
     gene            326..532
                     /locus_tag="EYO87_07680"
     CDS             326..532
                     /locus_tag="EYO87_07680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010400240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L29"
                     /protein_id="HIC65861.1"
                     /translation="MDAQELKSKTPDQLKDQLVALKKEAFNLRFQQATGQLENTARMR
                     AVRRDVARVKTILNQKAADAAASN"
     gene            545..790
                     /gene="rpsQ"
                     /locus_tag="EYO87_07685"
     CDS             545..790
                     /gene="rpsQ"
                     /locus_tag="EYO87_07685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011747109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17"
                     /protein_id="HIC65862.1"
                     /translation="MPKRILQGKVVSDKNEQTVTVLVERRFKHPLLHKTVRMSKKFRA
                     HDAENRFKVGDTVRIAECAPISKTKRWTVLTDEAVSA"
     gene            867..1235
                     /gene="rplN"
                     /locus_tag="EYO87_07690"
     CDS             867..1235
                     /gene="rplN"
                     /locus_tag="EYO87_07690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020185782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L14"
                     /protein_id="HIC65863.1"
                     /translation="MIQMQTNLDVADNSGARRVQCIKVLGGSHRRYASVGDIIVVSVK
                     EAIPRGRVKKGDVRKAVVVRTAKEVKREDGTSIRFDRNAAVILNNQGEPVGTRIFGPV
                     VRELRAKNFMKIISLAPEVL"
     gene            1235..1540
                     /locus_tag="EYO87_07695"
     CDS             1235..1540
                     /locus_tag="EYO87_07695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_351774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L24"
                     /protein_id="HIC65864.1"
                     /translation="MAAKLKKGDKVVVLAGKDKGKQGEITSVMPKDNKAIVDGVNIAI
                     RHTRQSQNSQGGRVPKAMPIDLSNLALMDKNGKATRVGFREEDGKKVRFAKTTGDVI"
     gene            1540..>1835
                     /gene="rplE"
                     /locus_tag="EYO87_07700"
     CDS             1540..>1835
                     /gene="rplE"
                     /locus_tag="EYO87_07700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011747111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L5"
                     /protein_id="HIC65865.1"
                     /translation="MLDATKYQPRLKTQFRETIKPALKEEFGYKNDMQIPRLDKIVLN
                     MGIGEAVKDTKKVKQGAEELSLIAGQKAVITKAKNSIAGFRVREEMPLGAKVTLR"
BASE COUNT          418 a          564 c          582 g          271 t
ORIGIN      
        1 ccatccgggc cggatcatgt tcgagatcga cggcgtgagc gacaccatcg cccgcgaagc
       61 cttgcgtctg ggcgcgatga aactgccggt cctgacccgc atcgtcgcgc gcgaggactg
      121 gtagggcgcg cgcgccgagg cgcgtctgat accaatacgc cccgccggaa acggcggggt
      181 ttgccatttg ccggaaaaag ccggcaaggg gttgcatgaa ccgggctctg gctgtatggg
      241 caggccttca tcacgaaact ccaccggaat cagggtggcc cggccaatcc ggggctctcc
      301 ggtgatgtgg gaaaggacga cgcgcatgga cgcgcaggaa ctgaaatcga agacgcccga
      361 ccagctgaag gatcagcttg ttgcgctgaa gaaagaggcc ttcaacctgc gcttccagca
      421 ggccacaggc cagcttgaaa ataccgcccg gatgcgcgct gtgcgccgcg acgtggcgcg
      481 tgtgaaaacc atactgaacc agaaagcggc cgacgccgct gcctcgaact aaggagcccg
      541 gcccatgccc aaacgcatcc tgcaaggcaa ggtcgtctcg gacaagaacg agcagaccgt
      601 caccgtcctg gtcgagcgcc gcttcaagca tccgctgctg cacaagaccg tgcggatgtc
      661 gaagaagttc cgcgcccatg acgcggagaa ccggttcaag gtcggcgaca ccgttcgcat
      721 cgccgaatgc gcgccgatct cgaagaccaa acgctggact gtcctgacgg acgaagccgt
      781 ctcggcttaa gtccttcatc acagatcaga aatgatcgaa accctggggc cggaagggcc
      841 ggtccccaaa ggtcgggagt aaacctatga tccagatgca gaccaatctg gatgtcgctg
      901 acaattccgg cgcacgccgg gtgcagtgca tcaaggtcct gggtggctcg catcgtcgct
      961 atgcgtcggt gggcgacatc atcgtcgtct ccgtcaagga agccattccg cggggccgcg
     1021 tcaagaaggg cgatgtccgc aaggccgtcg tcgttcggac cgccaaggaa gtgaagcgcg
     1081 aggacggaac ctcgatccgc ttcgaccgca acgccgccgt tatcctgaac aaccagggcg
     1141 agccggtcgg cacccggatc ttcggaccgg tcgtgcgtga actgcgcgcc aagaacttca
     1201 tgaagatcat ctcgctcgcg ccggaggtgc tgtgatggct gccaagctga agaagggcga
     1261 caaggtcgtc gtgctggccg gcaaggacaa gggcaagcag ggcgaaatca cgtccgtcat
     1321 gcccaaggac aacaaggcca tcgtggacgg cgtcaacatc gcgatccgcc acacccgcca
     1381 gtcgcagaac agccagggcg gccgcgtgcc caaggccatg ccgatcgacc tgtcgaacct
     1441 ggcactgatg gacaagaacg gcaaagcgac ccgcgtcggc ttccgcgagg aagatggcaa
     1501 gaaggtccgt ttcgccaaga ccacgggaga cgtgatctga tgctggacgc aaccaaatac
     1561 cagccgcgcc tgaagacgca gttccgcgag acgatcaagc ccgcgctgaa ggaagaattc
     1621 ggctacaaga acgacatgca gatcccgcgt ctggacaaga tcgtcctgaa catgggtatc
     1681 ggcgaggccg tgaaggacac caagaaggtc aagcagggcg ccgaagagct gtcgctgatc
     1741 gccggtcaga aagccgtcat caccaaggcc aagaactcga tcgccggttt ccgcgtccgc
     1801 gaagagatgc cgctgggtgc caaggtcacg ctgcg
//
LOCUS       DTVW01000583            2101 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1702213, whole
            genome shotgun sequence.
ACCESSION   DTVW01000583 DTVW01000000
VERSION     DTVW01000583.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2101)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2101)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2101
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1702213"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1027
                     /locus_tag="EYO87_07705"
     CDS             <1..1027
                     /locus_tag="EYO87_07705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018001173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="sugar ABC transporter ATP-binding protein"
                     /protein_id="HIC65866.1"
                     /translation="RILIMDEPTSALSASEVEVLFKVVRDLTERGVSIVYISHHLEEA
                     LTITDHAVVLRDGAMTASAPRAQIDLEWIVRNMVGDNYDLGSPPDTQMGQAALSIRNL
                     TLPDPSGGFDLVDRLSLDVRAGEIVCIYGLMGAGRTELLETCAGRLRASAGEIVLEGQ
                     EISHLSIAERIARGLALVPEDRQRDGLVQTMSVGENLSLASIRRFTRGLFTSARAERR
                     LVESSIREVTVKTSGPAAPIGSLSGGNQQKVVIGKILATRPRVIMLDEPSRGIDIGAK
                     AEVFRLLAEEARQGLAVIYSTSEVSECLSIAHRIVVMHKGRISAEFDSTVTKEKIMAA
                     SGESVAA"
     gene            1052..>2101
                     /locus_tag="EYO87_07710"
     CDS             1052..>2101
                     /locus_tag="EYO87_07710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007637093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HIC65867.1"
                     /translation="MSDTTATAATARKKRDFSIGRLLLEGRAFFALIAIIVVFSILSP
                     NYLTIGNLLIMASHVAIYGILAIGMLLVILNGGIDLSVGSILALAGVSAGAMMQGIQI
                     DAMGVILYPPVWAVVVLTCVLGAAVGAVNGVLVSIFKVPAFVATLGVMYVARGVALLM
                     TNGLTYNNLSGRAELGNTGFDWLGFNRIGGVPISVIVLAVLAILGGLMLSRSSFGRWL
                     YASGGNERAAELSGVPTRLVKITVYTLSGMLSAIAGLVLASQLTSAGPTAGTTYELTA
                     IAAVVIGGAALTGGRGTMRGTMLGAFVIGFLSDGLVIIGVSSYWQTVFTGAVIVLAVL
                     MNLAMSRLFAPSLASR"
BASE COUNT          325 a          666 c          711 g          399 t
ORIGIN      
        1 ccgcatcctg atcatggacg aaccgaccag cgcgctgtcg gccagcgagg tcgaggtgct
       61 gttcaaggtg gtgcgcgacc tgaccgagag gggtgtcagc atcgtctata tctcgcatca
      121 cctggaagag gctctgacca tcaccgatca cgccgtggtc ctgcgcgacg gcgccatgac
      181 cgcctcggcg ccgcgcgcgc agatcgacct ggaatggatc gtgcgcaaca tggtgggcga
      241 caattacgac ctgggcagcc cgcccgacac gcagatgggg caagccgcgc tgtcgatccg
      301 caacctgacc ctgccggacc cgtcgggggg cttcgatctg gtggaccggc tgtcgctgga
      361 tgttcgcgcg ggcgaaatcg tctgcatcta cgggctgatg ggggcaggtc gcacggagct
      421 gcttgaaacc tgtgccgggc gcctgcgcgc cagcgccggc gagatcgtgc tggaggggca
      481 ggaaatctcg cacctgtcca tcgccgaacg catcgcgcgc ggacttgccc tggtccccga
      541 ggatcgccag cgcgacggac tggtccagac catgagcgtg ggcgaaaatc tttcgctggc
      601 ctcgatccgg cgtttcacca ggggtctgtt cacctcggcc cgcgccgagc ggcgcctggt
      661 tgaaagcagc atccgcgagg tgacggtcaa gacctcgggt ccggccgcgc ccatcggatc
      721 gctgtcgggg ggcaatcagc agaaggtcgt gatcggcaag atcctggcga ccagacccag
      781 ggtgatcatg ctggacgaac cgtcgcgcgg catcgatatc ggcgccaagg ccgaggtctt
      841 ccgccttctt gcggaagagg ccaggcaggg tcttgccgtg atctattcga cctcggaagt
      901 cagcgaatgt ctgtccatcg cgcaccggat cgtggtcatg cacaagggcc gcatctcggc
      961 cgaattcgat tccaccgtca ccaaggaaaa gatcatggcc gcctcgggcg agtccgtggc
     1021 cgcctgagcg cgcttgagga aagacccaat catgtcggac accacagcca ccgccgccac
     1081 cgcccgcaag aagcgcgatt tcagcatcgg ccgattgctg ctggaaggcc gcgccttctt
     1141 tgcgctgatc gccatcatcg tcgtcttctc gatcctgtcc ccgaattatc tgacgatcgg
     1201 caacctgctg atcatggcca gccatgtggc catctacggc atccttgcca tcggcatgtt
     1261 gctggtgatc ctgaacggcg gcatcgatct ttcggtcggc tcgatcctgg cgctggcggg
     1321 ggtcagtgcg ggcgccatga tgcaggggat ccagatcgac gcgatgggcg tgatcctgta
     1381 tccgccggtc tgggccgtgg tggtgctgac ctgcgtgctg ggcgcggctg tgggggcggt
     1441 caatggcgtc ctggtctcga tcttcaaggt gccggccttc gtcgccacgc tgggcgtgat
     1501 gtatgtcgcc cgcggggtgg cgctgctgat gaccaacggg ctgacctaca acaacctgtc
     1561 gggccgggcc gagctgggca ataccggctt tgactggctg ggtttcaacc gcatcggcgg
     1621 tgtgccgatc tcggtcatcg tgctggcggt cctggcgatc ctgggcgggc tgatgctgtc
     1681 gcggtcgtcc ttcgggcgct ggctctatgc ttcgggcggc aacgaacgcg cggcggaatt
     1741 gtcgggcgtg cccacgcggc tggtcaagat caccgtctac acgctgtcgg ggatgctgtc
     1801 ggcgatcgcg ggactggtgc tggcctcgca gctgacctcg gccggaccga cggcgggcac
     1861 gacctacgaa ttgaccgcca tcgccgcggt ggtcatcggc ggcgccgcgc tgaccggcgg
     1921 gcgcggcacc atgcgcggca cgatgctggg tgccttcgtg atcgggttcc tgtcggatgg
     1981 cctggtcatc atcggcgtct cgtcctactg gcagaccgtc ttcaccggtg ccgtgatcgt
     2041 gctcgccgtc ctgatgaact tagccatgtc acggttgttc gctccatctc tggcctcaag
     2101 a
//
LOCUS       DTVW01000584            1351 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1703279, whole
            genome shotgun sequence.
ACCESSION   DTVW01000584 DTVW01000000
VERSION     DTVW01000584.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1351)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1351)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1351
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1703279"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..417)
                     /locus_tag="EYO87_07715"
     CDS             complement(<1..417)
                     /locus_tag="EYO87_07715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65868.1"
                     /translation="MGLEHRVLRAAMKGALRLLYPPQCLDCGQPVAAGRDDGIQLCPD
                     CWREARFITGTACCRCGAPLPDDGTSLPDGALTCDDCLTLARPWRHGRAALVYAGTGR
                     RLVLALKHGDRPDLAPALAGWLSRAAAPLIRPGMVVA"
     gene            419..1261
                     /locus_tag="EYO87_07720"
     CDS             419..1261
                     /locus_tag="EYO87_07720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007795736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HIC65869.1"
                     /translation="MTLSDPAPAPQGLTDRVALLRQRDRAVRSGHVDVLHRLAAAEIE
                     DRLAEINRRFTQPVVVTGFGPLWRELIPGAQVVADDPVLDLAQGAHDLVIHAMALHWA
                     EDPVGQMVQCRRALAPDGLFIAACLGGQTLHEVRAALAQAEAEVTGGLSPRILPMGEI
                     RDMGALLSRAGLALPVADLVSQRASYRDLIHLAHDLRAMGEGNAMAARLRRPTRATIF
                     ARAAAIMAEHHPDRDDPSRIATTFDLVFLTGWAPSETQPRPLRPGSATTRLADALNEI
                     RTKT"
BASE COUNT          206 a          508 c          443 g          194 t
ORIGIN      
        1 cgcgacgacc atgccgggcc ggatcagcgg cgcggccgcc cgcgacagcc agccggccag
       61 tgccggggcc aggtcggggc ggtcgccatg tttcagcgcc agcaccagcc gccgcccggt
      121 tccggcatag accagcgccg cccggccgtg ccgccagggc cgcgcaaggg tcaggcaatc
      181 gtcgcaggtc agcgcaccat cgggcaggct ggtgccgtca tcgggcagcg gcgcgccgca
      241 gcggcagcag gcggttccgg tgatgaaccg cgcctcgcgc cagcaatcgg gacaaagctg
      301 gatgccgtca tcccggcccg ccgctaccgg ctggccgcaa tccaggcatt gcggtggata
      361 aagcaggcgc agcgcgcctt tcatcgccgc gcgaagcacc ctatgttcca gccccatgat
      421 gaccctctcc gatcccgcgc cggcccccca gggcctgacc gaccgcgtag ccttgctgcg
      481 ccagcgtgat cgcgcggtcc ggtccggcca tgtcgacgtg ctgcaccgcc tcgcggccgc
      541 cgaaatcgag gataggctgg ccgagattaa cagaaggttt acgcaacccg tcgtcgtgac
      601 cggatttggc cctctgtggc gcgaactgat ccccggggcg caggtcgtgg ccgatgatcc
      661 ggtcctggat ctggcccagg gcgcgcatga tctggtgatc cacgccatgg cgctgcactg
      721 ggccgaggat ccggtcggcc agatggtgca atgccgccgc gcgctggcgc ccgacggtct
      781 gttcatcgcc gcctgtctcg gcggccagac cctgcacgag gttcgcgccg cactggccca
      841 ggccgaggcc gaagtcactg gcggcctgtc gccccgcatc ctgccgatgg gcgagatccg
      901 cgacatgggg gcgttgctgt cgcgggccgg gctggcgctg ccggtcgccg atctggtcag
      961 tcagcgcgcc tcctaccgcg atctgatcca tcttgcccat gatttgcgcg ccatgggcga
     1021 gggtaatgcc atggcggcgc gcctgcgccg tccgacgcgg gccacaatct ttgcccgcgc
     1081 cgccgcgatc atggccgaac atcaccccga ccgcgacgat ccgtcccgta tcgcgaccac
     1141 cttcgatctg gtctttctga ccgggtgggc cccgtccgag acgcaaccaa gaccgctgcg
     1201 acccggctcg gccacgaccc gccttgccga tgcgctgaac gagatcagga ccaagacatg
     1261 acgcaagccg ccgcgccagc gaatgccccc gccgaccacc ccccgatcca gcaacccaga
     1321 accggcatcc tgatcgccaa tctgggcacg c
//
LOCUS       DTVW01000585            1115 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1704288, whole
            genome shotgun sequence.
ACCESSION   DTVW01000585 DTVW01000000
VERSION     DTVW01000585.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1115)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1115)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1115
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1704288"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            28..615
                     /locus_tag="EYO87_07725"
     CDS             28..615
                     /locus_tag="EYO87_07725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65870.1"
                     /translation="MKAAAREVLSSPHVMMCTLILTLGFGQMFGLLSSAQQLFGEAYG
                     KGDAFPAWFAAMALLSGSGTILNATFVTRFGMRRIAKWAYIMQTFVSGAMLVLLAGDL
                     LPAGLQFPAFFLWCVSVFFMAGVTFGNLNALALQYVGHIAGMAASIVAAISTVAATLI
                     AAPVGLLYDGTAVPVVAATLICSGLAWFLMRFLYD"
     gene            complement(643..1115)
                     /locus_tag="EYO87_07730"
                     /pseudo
     CDS             complement(643..1115)
                     /locus_tag="EYO87_07730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999432.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="nucleoside/nucleotide kinase family protein"
BASE COUNT          176 a          394 c          342 g          203 t
ORIGIN      
        1 cgacgccggc cgctgcgcgc cggcccgttg aaggcggccg cgcgcgaggt tctgtccagc
       61 ccgcatgtca tgatgtgcac gctgatcctg acgctgggct tcgggcagat gttcggcctg
      121 ctgtcctcgg cgcagcaatt gttcggcgag gcctatggca agggcgacgc cttcccggcc
      181 tggtttgccg cgatggcgct gctgtcggga tcgggcacga tcctgaacgc caccttcgtg
      241 acgcgcttcg gaatgcggcg gatcgcgaaa tgggcctata tcatgcaaac cttcgtcagc
      301 ggcgcgatgc tggtcctgct ggcgggggat ctgttgccgg ccggcctgca gtttccggcc
      361 ttcttcctct ggtgtgtcag cgtcttcttc atggcggggg tgacattcgg caacctgaac
      421 gcgctggcgc tgcaatatgt cggccatatc gccggcatgg cggcctcgat cgtcgccgcg
      481 atatcgaccg tagcggcgac actgatcgcc gctcccgtcg gtctgctcta cgacggcacg
      541 gcggttcccg tggtcgcggc gacgctgatc tgttcaggtc tcgcctggtt cctgatgcgc
      601 tttctctacg actagaacgg catcggctgc acgagattgc cgcgctacca gccgcgcatt
      661 ggccagatca ttggccagat gcgcagcgac tgccgcgcga tctcggccaa agccccgcca
      721 gcgcgcctcg agcctgtcgc gcaatcgggc ctcgggcaca tccagaaaga cgctcagatc
      781 atagcggatc cggttccacg gcgcccgatc caaaagcagg taattgcctt cgatcaccac
      841 gattcgatcc gagggcgcga ccacgcccgc cccggcaacc gacaattccc gcccgcggtc
      901 gaacagcgga aagaccactt ccgcctgcgc atgcgacagg cgcgcggcca gcgccgcaaa
      961 tccctcggca tcgtatgtct ggacggcccc cttcacctcc cgcagacccc gcgcctcaag
     1021 aaccgcgtca tcaaggtgga atccgtccat cggcaccagg accgcctgct ccaaccgcgc
     1081 caccagcgcc tcggccaggg tggatttccc cgatc
//
LOCUS       DTVW01000586            1483 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1704415, whole
            genome shotgun sequence.
ACCESSION   DTVW01000586 DTVW01000000
VERSION     DTVW01000586.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1483)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1483)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1483
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1704415"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1337)
                     /gene="hydA"
                     /locus_tag="EYO87_07735"
     CDS             complement(<1..1337)
                     /gene="hydA"
                     /locus_tag="EYO87_07735"
                     /EC_number="3.5.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002724284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropyrimidinase"
                     /protein_id="HIC65871.1"
                     /translation="MTMDLVIRNGTVATASDSFKADIGITEGRITAIAESLSAERVID
                     ATGKLVLPGGIEAHCHIAQESATGGMTADDYRTGSISAAFGGNSCFVPFAAQHRGMGV
                     IETLDLYDSRAQRASVIDYGYHLIVADPTEKALTTELPQAFARGVTSFKVFMTYDLMK
                     IDDSQFLDILSVARSHGALTMIHAENSGIIKWISDRLVAAGHVAPRYHAISHPAAAEA
                     EAINRAITLARFVDAPLLIVHVSTPEGAELVARARLEGAKIFGETCPQYLFLTRDDLD
                     RPGLEGAKFMCSPPVRDSATQKALWRHLQAGTFSVFSSDHAPYRFDASGKLSNGPDAT
                     FRQIANGMPGIALRLPLLFSEGVRGGKITLNQFVALGSTNAAKLYGMHPRKGTIAIGA
                     DADIAIWDPDEARTVTVEGQHDNMDYTPFEGRQVTGWPVTVLSRGEFVIEDGKL"
     gene            complement(1334..>1483)
                     /locus_tag="EYO87_07740"
     CDS             complement(1334..>1483)
                     /locus_tag="EYO87_07740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007626607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HIC65872.1"
                     /translation="RAASASAIPAVRYGTTEEFAKTAAFLVSAPASYITGSLVRCDGG
                     SIRSV"
BASE COUNT          246 a          475 c          498 g          264 t
ORIGIN      
        1 agcttgccgt cctcgatcac gaattctccc cgcgacagga cggtgacagg ccagccggtc
       61 acctgccgcc cctcgaacgg tgtgtaatcc atgttgtcgt gctggccctc gacggtcacg
      121 gtgcgggcct cgtcgggatc ccagatcgcg atgtccgcgt cggcgccgat ggcgatcgtc
      181 cccttgcgcg gatgcatccc gtagagcttc gccgcattgg tcgatccaag cgccacgaac
      241 tggttcagcg tgatcttgcc gccccgcacc ccttccgaga acagaagcgg cagccgcagc
      301 gcgatgcccg gcatcccgtt cgcgatctgc ctgaaggtgg catccgggcc gttcgacagc
      361 ttgccgcttg cgtcgaaacg gtatggcgca tggtcggagg aaaagaccga aaaggtgccc
      421 gcctgaagat gccgccacaa ggccttttgc gtggcgctgt cgcggaccgg gggcgaacac
      481 atgaacttgg cgccctccag gccggggcgg tccaggtcgt ccctggtcag gaacaggtat
      541 tgcggacagg tttcgccgaa gatcttcgcg ccttccagcc gggccctggc caccagttcc
      601 gcaccctcgg gcgtggaaac gtggacgatc agcagcggcg cgtcgacgaa ccgggccagc
      661 gtgatggccc ggttgatcgc ctcggcctcg gcggcggccg ggtggctgat ggcgtgatag
      721 cgcggcgcga catggcccgc cgccaccagc cggtccgata tccacttgat gatgccggaa
      781 ttctcggcat ggatcatggt cagcgcgcca tggcttcgtg ccaccgacag gatgtcgagg
      841 aactggctgt cgtcgatctt catcaggtcg taggtcatga agaccttgaa cgaggtcacc
      901 ccgcgcgcga aggcttgcgg caattccgtg gtcagcgcct tctccgtcgg atcagcgacg
      961 atcagatgat agccatagtc gatgaccgag gcgcgctgcg cgcggctgtc gtaaaggtcc
     1021 agcgtctcga tcacgcccat gccgcgatgc tgcgccgcga agggaacgaa gcacgaattt
     1081 ccgccgaacg cggccgagat cgagccggtg cgataatcgt cggccgtcat cccgccggtc
     1141 gcgctttcct gcgcgatgtg gcaatgcgcc tcgatcccgc cgggaaggac cagcttgccg
     1201 gtcgcgtcga tcacgcgctc ggcggacagg ctttcggcga tggcggtgat gcggccttcg
     1261 gtgatgccga tatcggcctt gaagctgtcc gaagccgtgg cgacggtgcc gttcctgatg
     1321 acaaggtcca tggtcatacc gatctgatcg agccgccgtc gcagcgcacg aggctgccgg
     1381 tgatgtagct ggccggtgcc gaaacgagga aggcggcggt ctttgcgaat tcctcggtcg
     1441 tgccatagcg gactgccgga atggcactgg ccgaggcggc gcg
//
LOCUS       DTVW01000587            1291 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1705270, whole
            genome shotgun sequence.
ACCESSION   DTVW01000587 DTVW01000000
VERSION     DTVW01000587.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1291)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1291)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1291
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1705270"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            115..945
                     /locus_tag="EYO87_07745"
     CDS             115..945
                     /locus_tag="EYO87_07745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009805916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HIC65873.1"
                     /translation="MVIFAVTDWDDAYENGRNIPGGSDYPGAWVAPSKAFRNSADARL
                     DVAYGSGARHRYDLFLPQGNPAGLFFFVHGGFWMALNKSYWSHLAAGAVAQGWAVAIP
                     SYDLCPDVSIAEITRKVGAAITHAAKEIEGPIVLSGHSAGGHLVTAMMCEDTPLPPGI
                     RARLVHVLSISGLHDLRPMLRTARNETLKLDMESAEANSPVLKRPLEGVRLTTWVGGG
                     ERQEFLRQSALLSNIWHGLGCQTQDVVAPDRHHFNVVDDLTEPRGQMLRIMLGEGATA
                     "
     gene            1066..>1291
                     /locus_tag="EYO87_07750"
     CDS             1066..>1291
                     /locus_tag="EYO87_07750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009805915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HIC65874.1"
                     /translation="MTRKTRLLSTTLLTMVLSAPAFAQDVPASANDDVLRIGLVYTLS
                     GPPAALGVQARDGFMLGVEEIGALGGMQTEI"
BASE COUNT          237 a          406 c          418 g          230 t
ORIGIN      
        1 ccaaacggac ggctttcggc tccagaccgg cggatcgggt cgtcgtcgcg gatcgcatcg
       61 cgcggatgcg gtcgccacgc agagccggta agaaatgacg atcagggaga gtcgatggtc
      121 atcttcgctg tcacggactg ggacgacgcc tatgaaaacg ggcgcaacat ccccggtggg
      181 tcggattatc ccggtgcctg ggttgcgcct tccaaggcat tccgaaattc tgcagatgcc
      241 cgcctggatg tcgcatacgg ttcgggcgcg cggcatcggt atgacctctt tcttccgcag
      301 ggcaatcccg cgggtctctt cttcttcgtg catggcggct tttggatggc cctaaacaag
      361 tcctactggt cgcatctggc cgccggcgcc gtggcgcagg gatgggccgt ggccatcccg
      421 tcctatgatc tgtgcccgga tgtcagcatc gccgagatca cgcgaaaggt cggcgccgcc
      481 atcacccatg ccgccaaaga aatcgagggg ccaatcgtcc tgtcgggcca ttcggcgggg
      541 gggcatctgg tcaccgcgat gatgtgcgag gatacgccgc tgccgccagg aatacgcgcc
      601 cggctggtcc atgtgctgtc catttcaggc ctgcacgacc tgcggccgat gctgcgcacc
      661 gcgcgcaacg agacgctgaa actggacatg gaaagtgccg aagcgaacag ccccgttctg
      721 aaacgccccc tagagggcgt gcgtctgaca acctgggtcg gcggcggcga gcggcaggaa
      781 tttttgcggc agagcgcgct cctgtcgaac atctggcacg gtctgggttg ccagacgcag
      841 gatgtcgttg ccccggatcg ccaccatttc aacgtcgtcg acgacctcac agaacctcgg
      901 ggccagatgc tgcgcatcat gctcggcgaa ggggcgacag catgaccatg gatgggctta
      961 catgccgaaa gcgttgcgcc gctcttcgcc cggtgccacg ctgaccggac cggcacgacg
     1021 aacaatgaga cggcaaggcc gcagaccgca acaagggagt tcatgatgac ccggaagacc
     1081 agattacttt caacgaccct tctgaccatg gtgctgtcag cgccggcgtt cgcgcaggac
     1141 gttccggcct ctgccaacga cgatgtgctg aggatcggcc ttgtctacac gctgtccggc
     1201 ccgcccgcag cgcttggcgt ccaggcgcgc gacggcttca tgctgggggt ggaggaaatc
     1261 ggcgccctcg gcggcatgca gaccgaaatc a
//
LOCUS       DTVW01000588            1839 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1706759, whole
            genome shotgun sequence.
ACCESSION   DTVW01000588 DTVW01000000
VERSION     DTVW01000588.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1839)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1839)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1839
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1706759"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..567)
                     /locus_tag="EYO87_07755"
     CDS             complement(<1..567)
                     /locus_tag="EYO87_07755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011747343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long-chain fatty acid--CoA ligase"
                     /protein_id="HIC65875.1"
                     /translation="MRFDPDRPPEGTIRDWLDSRAENQAQRICHVFPEDGGTLNWSEL
                     RNGAADIAGRLAAMGIPKGASVALMMPNGRNAVLGLFGALYGGFRATMINLVAGAEAI
                     GYALSHSRAAIVLVAESQRDLLDRALPRTDRPVIVTAGADGFDWPEDGAAGAPHPHGP
                     GDDALLMYTSGTTGRPKGVLHSHASLLAG"
     gene            complement(564..>1839)
                     /locus_tag="EYO87_07760"
     CDS             complement(564..>1839)
                     /locus_tag="EYO87_07760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011747344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HIC65876.1"
                     /translation="EPGRNRLLAELAVRTTGLGNVADKITKNHRKTLGLMRDIRDVRT
                     FGIIADDPATGITEIARPIGVIGAVVPSTNPAATPANNIVNALKCGNAIILSPSPKGV
                     ACCEMLLDYIHAEFDKIGEDKALVQMLPAPGSKAKTQRLLETCDLAIVTGSQDNVRRA
                     YESGTPAIGVGAGNVAVIVDETADLAAAAARIAASKTFDNATSCSSENALIVVDAIYD
                     DFLAAMAAEGGAVVPAAEAGGIVARLWPDGHLNREIIARDADVTVEKLGLTGRVREGT
                     RFLAVETDGIGPDHPLSGEKLSRVAALYRARDFADATRIARRILTHQGAGHSIGLHSA
                     DPDRPVAMGRDLPVCRVIVNQAHCFATGGAFDNGLPFSLSMGCGSWGGNSIDANLHWR
                     HFTQTTRVVRAIPPREPELDEIFAGYWAEAGR"
BASE COUNT          279 a          631 c          632 g          297 t
ORIGIN      
        1 gcccgccagc aggctggcat ggctgtgcag cacgcccttg ggccgcccgg tcgtccccga
       61 cgtatacatc agcagcgcat cgtcgccggg cccgtgcggg tgcggcgcgc cggcagcccc
      121 gtcctctggc cagtcgaagc cgtccgcgcc cgcggtcacg atcaccgggc ggtcggtccg
      181 gggcagggcg cggtccagca gatcgcgctg cgactccgcc accagcacga tcgccgcccg
      241 cgaatgcgac aatgcatagc cgatcgcctc ggccccggcg accaggttga tcatcgtcgc
      301 gcgaaagccg ccataaagcg cgccgaacag gcccagcacg gcgttgcgcc cattgggcat
      361 catcagcgcg acgctggcgc ctttcgggat ccccatcgcg gccaggcgcc cggcaatgtc
      421 ggcggcgccg ttacgcagtt ccgaccagtt cagggtgccg ccatcctcgg gaaagacatg
      481 gcagatccgc tgtgcctggt tctcggcacg ggaatccagc cagtcgcgga tcgtgccttc
      541 gggcggccgg tcgggatcga atctcatcgc ccggcctcgg cccagtagcc ggcgaagatc
      601 tcgtccagtt ccggttcgcg gggcgggatc gcgcgcacga cgcgcgttgt ctgcgtgaaa
      661 tgccgccaat gcagattggc gtcgatggaa ttgccgcccc aggaaccgca gcccatcgac
      721 agcgaaaagg gcagcccgtt gtcgaaggcc ccgccggtgg cgaagcaatg cgcctgattg
      781 acgatgaccc ggcagaccgg caggtcgcgg cccattgcga cgggccggtc gggatcggcc
      841 gaatgcaggc cgatggaatg acccgcgccc tgatgggtca ggatccggcg ggcgatgcgg
      901 gtggcatccg cgaaatcgcg cgcgcgatac agcgcggcga cccggctcag cttttcgccc
      961 gacaggggat gatccgggcc gatcccgtcg gtctcgaccg ccagaaagcg cgtgccttcg
     1021 cgcacccggc cggtcaggcc cagcttctcg accgtgacat cggcgtcgcg cgcgatgatc
     1081 tcgcggttca gatgtccgtc gggccacaat cttgcgacga tgccgcccgc ctcggcggcg
     1141 ggaacgaccg cgccgccttc ggccgccatc gcggcgagga aatcgtcata gatcgcgtcg
     1201 accacgatca gcgcgttctc ggacgaacag gaggtcgcgt tgtcgaaggt cttcgatgcc
     1261 gcgatcctgg cggcggcggc ggccagatcg gcggtctcgt ccacgatcac ggcgacattg
     1321 cccgcgccga ccccgatggc gggggtgccg ctttcatagg cgcgacgcac gttgtcctgg
     1381 ctgccggtga cgatggccag atcgcaggtt tccagcagcc gctgcgtctt ggccttgctg
     1441 cccggcgcgg gcagcatctg gaccagcgcc ttgtcctcgc cgatcttgtc gaattcggca
     1501 tggatgtaat ccagcagcat ctcgcagcag gccacaccct tgggcgaggg cgacaggatg
     1561 atcgcattgc cgcatttcag cgcgttgacg atgttgttgg ccggcgtcgc cgccgggttg
     1621 gtcgagggca cgaccgcgcc gatcacgccg atggggcggg cgatttcggt gatgccggtg
     1681 gccggatcat ccgcgatgat gccgaaggtc cgaacgtccc ggatgtcgcg catcaggccc
     1741 agcgtcttgc ggtggttctt ggtgatcttg tcggcgacat tgccaaggcc ggtcgtcctg
     1801 acggccagtt ccgccagcag gcgattccgg cccggctcc
//
LOCUS       DTVW01000589            1849 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1712522, whole
            genome shotgun sequence.
ACCESSION   DTVW01000589 DTVW01000000
VERSION     DTVW01000589.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1849)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1849)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1849
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1712522"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            160..1116
                     /locus_tag="EYO87_07765"
     CDS             160..1116
                     /locus_tag="EYO87_07765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014200216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HIC65877.1"
                     /translation="MTLNALMKVALTGAGSAALIASAGMDAAQEYPERPIEMVVTFGP
                     GGGADLMGRQMGRLMEKPLGVSIPVSNVAGASGNAGLTRLRTDPADGYTMGTLISLTV
                     ASWESGLGDSKPEDFQVLAVVQNSPSFLFVPASSPYQTAEDLFAYAKENPGELTVATS
                     GYGTQDDVTLKLLARDGVQMENVPFQAPGERYASPIGGHTAVLYEEPGDVAQFLKAGQ
                     LKPLVVFSKERHPSFPDVPTSVELGYDISGLDNFRTVAVRAGTDPAIVEKLQSAVEES
                     VASAEWQTFCAETYSCIQPVTGEEAQAMIRDFLQLITDQLAS"
     gene            1126..1725
                     /locus_tag="EYO87_07770"
     CDS             1126..1725
                     /locus_tag="EYO87_07770"
                     /inference="COORDINATES: protein motif:HMM:PF07331.9"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter TctB
                     family protein"
                     /protein_id="HIC65878.1"
                     /translation="MAMAPNMRTEDAARQAAAPPTPRARRAKRLIPVAVPALLLAASL
                     ALPGFMFSSDRRPDVPGLGPAAWPNAVLALLALCSAIWLFSEVWLLVRGRVSTSLATP
                     HDEDVYHYGKALTGILLVIAFGWRLPIVGFALACAGFLLVWCLYGGLRHPAVLLLVPT
                     IGTVALLWMFMGLALMPLSRGAGVFDRFSVWLLQLLGIY"
BASE COUNT          283 a          595 c          647 g          324 t
ORIGIN      
        1 ccgatgtgat tcacctgatg gacgagctgc ccaagggccc gtccggcaag attcaacgcc
       61 tgcggctggc ggacatgacc ggatgacgcc gcaacccgtc cgctttggga ggagaggacg
      121 ggaccacaag atcaacattt gccctgggag gagaagaaga tgaccctgaa cgccttgatg
      181 aaagtcgccc tgaccggcgc cgggagcgcc gcgctgatcg catcggccgg aatggacgcc
      241 gcgcaggaat accccgaacg cccgatcgag atggtcgtga ccttcggccc cggcggcggc
      301 gccgacctga tgggccggca gatggggcgg ctgatggaaa agccgctggg cgtgtcgatc
      361 ccggtctcga acgtcgccgg ggcatcgggc aatgccgggc tgacgcggct gcgcaccgat
      421 cccgccgacg gctatacgat ggggacgctg atctcgctga ccgtggcgtc ctgggaatcc
      481 gggctgggcg acagcaagcc cgaggatttc caggttctgg ccgtggtcca gaactcgccc
      541 tcgttcctgt tcgtccccgc ctccagcccc taccaaacgg ccgaggatct gttcgcctat
      601 gccaaggaga atccgggcga actgacggtg gcgacctcgg gctatggcac gcaggacgac
      661 gtgacgctga agctgctggc ccgtgacggc gtgcagatgg agaatgtgcc gttccaggcg
      721 cccggcgaac gctatgcctc gcccatcggc gggcatacgg cggtgctgta cgaggaaccg
      781 ggcgatgtcg cgcaattcct gaaggccggg cagctgaagc cgctggtggt gttttccaag
      841 gaacgccacc catcctttcc ggacgttccg acctcggtcg aactgggcta cgacatctcg
      901 gggctggaca atttccgcac cgtcgcggtg cgcgccggca ccgatccggc catcgtcgaa
      961 aagctgcaat cggcggtcga ggaatcggtg gccagcgcgg aatggcagac cttctgtgcc
     1021 gaaacctaca gctgcatcca gccggtcacg ggcgaggagg cccaggcgat gatccgcgat
     1081 ttcctgcaac tgatcacgga ccagctggca agctgaggcg gcaggatggc gatggccccg
     1141 aacatgcgaa ccgaggatgc ggcacgacag gccgccgcgc cgccgacccc gcgggcgcgg
     1201 cgcgccaaac ggttgatccc ggtcgcggtg cccgccctgc tgctggccgc ttcgctggct
     1261 ctgccgggct tcatgttcag ttccgaccgg cgcccggacg tgcccggcct tggaccggcg
     1321 gcatggccga acgcggtgct ggcgctgctg gcgctgtgtt cggcgatctg gcttttctcc
     1381 gaggtctggc tgctggtccg gggccgcgtc tcgaccagcc ttgccacgcc gcatgacgag
     1441 gatgtctatc attacggaaa ggcgctgacc ggcatccttc tggtcatcgc cttcggctgg
     1501 cggctgccga tcgtgggctt cgcgctggcc tgcgcgggat ttctgctggt ctggtgcctg
     1561 tatggcggcc tgcgccatcc ggcggtcctg ctgctggtgc cgaccatcgg cacggtggcg
     1621 ctgttgtgga tgttcatggg tctggcgctg atgccgctga gccggggcgc gggcgtcttc
     1681 gaccggttca gcgtctggct gctgcaactt ctgggcatct actgagaggg cgcgacgatg
     1741 cagacgatag acctgctgat ggccggcttt gcctcggcct tccagatcac cgccttcctg
     1801 acggtggtcg cgggcctgct ggtcggcgtg atcgcgggcg cgctgccgg
//
LOCUS       DTVW01000590            1116 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1712957, whole
            genome shotgun sequence.
ACCESSION   DTVW01000590 DTVW01000000
VERSION     DTVW01000590.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1116)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1116)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1116
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1712957"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..861)
                     /locus_tag="EYO87_07775"
     CDS             complement(<1..861)
                     /locus_tag="EYO87_07775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013067178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter"
                     /protein_id="HIC65879.1"
                     /translation="MIYAYEIRNGRLSRLADLADLRRAVWIDAVVPTEDEVTQIRQLG
                     LEVPSLAEMEEIEISNRLYREDGFDYMTAVLPGERADGQRAAMPVSFILSSERLVTVR
                     HHAPRPFLTFPARAERSTLGCGTVDRLFSGLVEEIIARLADILENSGRLLDETTAGVF
                     ESRPGATGRRARGTADRLQTALREVGREAELMARVRLGLLTVERILAFYTATIDERPE
                     PERLRPVIRGHMRDIQALEVHADFLGSRVSLAVDTTLGMINLEQNNTVRILSVIAALF
                     LPPTLIASIYG"
     gene            complement(889..>1116)
                     /locus_tag="EYO87_07780"
     CDS             complement(889..>1116)
                     /locus_tag="EYO87_07780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010392816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxypyruvate reductase"
                     /protein_id="HIC65880.1"
                     /translation="ASVGSDGRDGPGEAAGGIVDPGTLTRIEAAGIDLDRVLADNDST
                     PALAAAGGLVQTGPTGTNVADLAVFLRGAEI"
BASE COUNT          188 a          378 c          366 g          184 t
ORIGIN      
        1 cccgtagatg ctggcgatca gcgtcggcgg caggaagagg gctgcgatca ccgacaggat
       61 gcgcaccgtg ttgttctgtt ccagattgat catgcccagg gtcgtgtcca ccgccagact
      121 gacccgtgag cccagaaaat cggcatggac ttccagcgcc tgaatgtcgc gcatatggcc
      181 ccggatcacc gggcgcagcc tttcgggttc gggccgttcg tcgatggtcg cggtatagaa
      241 ggccagaatc cgttcgaccg tcagcaggcc aaggcgcacc cgcgccatca actccgcctc
      301 gcgccccacc tcgcgcagcg ccgtttgcag gcgatcggcc gtgccgcgcg cgcggcgccc
      361 ggtcgcgccg gggcggcttt cgaacacgcc cgcggtcgtc tcgtccagca gccgacccga
      421 attttcgagg atgtcggcca ggcgcgcgat gatctcttcc accagccccg agaacagcct
      481 gtccaccgtg ccgcagccaa gggtcgatcg ttcggccctc gcgggaaagg tcaggaacgg
      541 ccggggcgca tggtgacgga ctgtcaccag acgctcggac gacaggatga aactgaccgg
      601 catcgccgcg cgctggccat cggcgcgttc gccgggcaga acggccgtca tgtaatcgaa
      661 gccgtcctcg cgatacagac ggttggagat ctcgatttct tccatctcgg ccagactggg
      721 aacctcgagg ccaagctggc gtatctgcgt cacctcgtct tcggtgggaa cgaccgcgtc
      781 gatccagacg gcgcggcgca gatcggcaag gtccgccaga cgcgacaagc ggccattgcg
      841 aatctcgtag gcgtagatca tcggcaatcg ttcccttgcg gtccgggtct agatttcggc
      901 gccgcgcagg aaaacggcca gatcggcgac attggtgcct gtcggtccgg tttggaccaa
      961 accgcctgcg gcggcaagcg cgggggtgga atcgttgtcg gcaagcaccc ggtccagatc
     1021 gatgcccgcc gcctcgatcc gcgtcagcgt gccgggatcg acaatgccgc ctgctgcctc
     1081 gcccggcccg tcgcggccgt cgctgccgac cgaggc
//
LOCUS       DTVW01000591            2332 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1716268, whole
            genome shotgun sequence.
ACCESSION   DTVW01000591 DTVW01000000
VERSION     DTVW01000591.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2332)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2332)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2332
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1716268"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..482)
                     /locus_tag="EYO87_07785"
     CDS             complement(<1..482)
                     /locus_tag="EYO87_07785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinol oxidase subunit II"
                     /protein_id="HIC65881.1"
                     /translation="MNTGSDPHHRKPASALARTVPITAAILLLAGPVLAQDSLLSPAG
                     PVAEAQRSDLIRVTLITMIAVVPVLVGVPVILWRYHRVRGNGCYRPGKLYRPDWEFSG
                     PLEAAMWGVPFAIIAVLGWSLWQTTIRLDPYAPLGPDPLEVQAIGLDWKWLFLYPEQG
                     "
     gene            complement(582..1919)
                     /locus_tag="EYO87_07790"
     CDS             complement(582..1919)
                     /locus_tag="EYO87_07790"
                     /inference="COORDINATES: protein motif:HMM:PF02518.24"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing histidine kinase"
                     /protein_id="HIC65882.1"
                     /translation="MRAEWADILRSTPMRMTLRLVALFTLISLLTFAATWWLANRALL
                     DATEAGLDASLDELSALGDQKDIAEAVGRLAARADPENTIVIFDRAAGLVGNYPDRVP
                     GSGLREFDPADRGDGFSSRYIVKSREVPGGILTLGQSADAFDEIREVFGQVLSFTLAP
                     TLLLVLAAGIFSARRSARRLAAIEHTLDRLRGGELSARLPDMPGPADDLSRVGRGIDR
                     LAEAQQASTEALRQVSADIAHDLKTPIQRLSVQLARVRDDLPDGVAPEALDRAEAEID
                     GIVAIFHSLLRIAQIEGGSPRTRFVPVDLAGLAATMAEVYEPAAEESGHAMTVETGGE
                     ARIMGDRALLGQVIANLIENALRHTPPGSAVTLRVDGPRLIVADSGPGIPAGERRKVL
                     RRLYRLDRSRTTPGSGLGLSLVEAIVKLHGGTIDLQDNAPGLRVLVNLPPAPA"
     gene            complement(1916..>2332)
                     /locus_tag="EYO87_07795"
     CDS             complement(1916..>2332)
                     /locus_tag="EYO87_07795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009816223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HIC65883.1"
                     /translation="DRIEGLNAGGDDYLVKPFAFGELSARLSALARRPQMRDDESVLS
                     AGDLRMDLIRRKVTRGGVEIDLLPREFALLECLLRRKGRVQTRTMLLEAVWELSFDPQ
                     TNVVESHISRLRGKIDKPFETELIKTVRGAGYRIEA"
BASE COUNT          385 a          820 c          772 g          355 t
ORIGIN      
        1 attccctgtt cgggatagag aaacagccac ttccagtcca gcccgatcgc ctgaacctcc
       61 aacgggtccg ggcccagcgg cgcataggga tccagccgga tcgtggtctg ccacagcgac
      121 cagccgagca ccgcgatgat ggcgaagggc acgccccaca tcgccgcctc cagcgggccc
      181 gagaattccc agtcgggacg gtagagcttg ccggggcgat agcacccgtt gcccctgacc
      241 cgatgatagc gccacaggat gaccggaacg ccgaccagca caggcaccac cgcgatcatc
      301 gtgatcaggg tgacgcgaat cagatcgctt cgctgcgcct cggcgacggg tccggcgggc
      361 gacagaagac tgtcctgggc cagaaccgga ccggccagca gcaggatcgc cgcggtgatc
      421 ggaaccgtcc gggccagggc gctggcgggc ttgcgatggt gcggatcaga tcccgtgttc
      481 atggcttcgt ccggttcttc gatgaccgca acctgtccgg atcggccggc acgggcaagc
      541 cggtccccgg cttcggcgcg atccgtcgat cccgatgccg atcatgccgg ggccgggggc
      601 aggttgacaa gcaccctcag ccccggcgcg ttgtcctgca gatcgatcgt tccgccgtgc
      661 agcttgacga tggcctcgac aaggctgagg ccaagcccgc tgccgggcgt ggtgcggctg
      721 cggtccagac ggtagagacg gcgcagcacc ttcctgcgct cgccggccgg aatccccggc
      781 ccgctatcgg cgacgatcag gcgcggtcca tcgacgcgca gcgtcaccgc gctgcccggc
      841 ggcgtatggc gcagcgcgtt ttcgatcaga ttggcgatca cctggcccag cagggcgcga
      901 tcgcccatga tccgggcctc gccgcccgtc tcgaccgtca tggcgtgacc gctttcctcg
      961 gccgcgggct cgtagacctc ggccatcgtc gcggccaggc cggccaggtc caccggcaca
     1021 aagcgcgtcc gcgggctgcc gccctcgatc tgggcgatgc gcagaagcga atggaagatc
     1081 gcgacgatgc cgtcgatctc ggcctcggcg cgatcaagcg cctctggcgc gactccgtcg
     1141 ggcaggtcgt cgcgaacccg cgccagctgc accgacaggc gctggatcgg ggtcttcaga
     1201 tcatgggcga tatcggccga tacctgtcgc agcgcctcgg ttgatgcctg ctgcgcctcg
     1261 gccagccggt cgatgccgcg tccgacacgc gacagatcgt cggcggggcc cggcatgtcc
     1321 ggcaggcgcg ccgacaattc gccgccgcgc aggcggtcca gcgtgtgctc gatcgcggca
     1381 agtcggcggg ccgaacgccg cgcgctgaag atccctgcgg ccaggaccag caggagcgtc
     1441 ggcgccagcg tgaaggacag gacctgcccg aagacctcgc ggatctcgtc gaaggcatcg
     1501 gcggactgac ccagggtcag gatcccgccc ggcacctcgc ggctcttgac gatgtagcgg
     1561 ctggagaaac cgtcaccgcg atcggccgga tcgaattccc gcagccccga tccgggcacc
     1621 ctgtccggat aattgccgac aaggccggcg gcgcggtcga agatcacgat cgtgttttcc
     1681 ggatcggccc gcgccgcaag ccgtccgaca gcctcggcga tgtccttctg gtcgcccagt
     1741 gcggacaatt cgtccagact ggcatccagc ccggcttcgg tggcgtccag cagcgcccgg
     1801 ttggccagcc accaggtcgc ggcgaaggtc agcaggctga tcagcgtgaa cagcgccaca
     1861 agccgcagcg tcatccgcat cggggtcgag cgcaggatat ccgcccattc ggccctcatg
     1921 cctcgatcct gtagccggcg ccgcgcacgg tcttgatcag ttcggtctcg aagggcttgt
     1981 cgatcttgcc gcgcagccgc gagatgtggc tttcaaccac attggtctgc ggatcgaagc
     2041 tgagctccca caccgcttcc agcagcatgg tgcgggtctg cacgcggccc tttcggcgca
     2101 acaggcattc cagcagcgcg aattcgcgcg gcagcaaatc gatctcgacc ccgccgcgcg
     2161 tgaccttgcg ccggatcagg tccattcgca gatcgccggc ggacaggacc gattcatcat
     2221 cgcgcatctg cgggcggcgg gccagcgccg acagccgggc cgacaattcg ccaaaggcga
     2281 agggcttgac cagataatca tcgccgccgg cattcagtcc ctcgatccgg tc
//
LOCUS       DTVW01000592            1916 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1717561, whole
            genome shotgun sequence.
ACCESSION   DTVW01000592 DTVW01000000
VERSION     DTVW01000592.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1916)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1916)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1916
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1717561"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..647)
                     /locus_tag="EYO87_07800"
     CDS             complement(<1..647)
                     /locus_tag="EYO87_07800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HIC65884.1"
                     /translation="MRHILSGLAIAAVMAFGAAAPAAAQNPFEPVIYVNNKAVTRYEV
                     GQRQRFMQILGAPAVDAKAAEDALVQDRLRMYAAQQLGIEVTEEGLQNGLEEFASRAG
                     LSAAEFTVALERAGVEQQAYRDFVKAGVAWRAVIRQRLLPRIKVSDAELDQELKRVVE
                     TPVVNRVLLSELVIPAPPGQEQQAMARASQIAGSNPSEAQFAAAARQYSAAGSAAL"
     gene            complement(680..>1916)
                     /locus_tag="EYO87_07805"
     CDS             complement(680..>1916)
                     /locus_tag="EYO87_07805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011747239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="LPS-assembly protein LptD"
                     /protein_id="HIC65885.1"
                     /translation="RGYLLDYGITDADRLWSGISLERITREKLFFGRVGNYESLRDDE
                     NNATSPAQVADVIWQRRFVPDLIGGQGLMEWSAHAHRRPSDADQVGRDVARGSVGLDW
                     RRQEILPGGLVGAAIAGLDADLYRIAQDSRYDDVETRVDPRIGVELRWPLIGGSGGAT
                     HLVEPVAQLLWSPPGSDKEIPNEDSRLIEFDEGNLFSDNRFPGYDARETGLRANLGLS
                     WTRIDPTGWSLGLTAGRVLRNRPDRAFAPDSPLAGRRSDWLVAANYDSGNGLAIANRA
                     LFDDDFNISRNELRLGLLRPDLQVSAGHLWIDSDAAEGRDSDISELTGNVGWQVRRGW
                     WANAETRYDFVADRAQSASLDLAYRNECLTMEMGVSRRFTASDSVRPETSFDLSVRLG
                     GFGRSDDASGTVARRTCMR"
BASE COUNT          303 a          673 c          620 g          320 t
ORIGIN      
        1 agcgccgccg atccggcagc cgaatattgc cgcgcggcgg cggcgaactg cgcttcggac
       61 gggttcgagc cggcgatctg gctggcccgc gccatcgcct gctgttcctg gcccgggggc
      121 gccgggatga ccagttccga cagcagcaca cgattgacga ccggcgtttc gaccacgcgc
      181 ttcagttcct gatccagttc ggcgtcgctg accttgatcc ggggcagcag acgctggcgg
      241 atgaccgccc gccaggcgac gcccgccttg acgaaatcgc gataggcctg ctgctcgact
      301 ccggcgcgtt ccagcgccac ggtgaattcg gcggcgctga gaccggcgcg gctggcgaat
      361 tcctcgagcc cgttctgcag gccttcctcg gtcacctcga tgcccagttg ctgggccgca
      421 tacatccgca gccggtcctg gaccagcgcg tcctcggccg ctttggcatc gacggccggc
      481 gcgcccagga tctgcatgaa acgctggcgc tggccgactt cgtagcgggt cacggccttg
      541 ttgttgacgt agatcaccgg ctcgaacgga ttttgcgcgg ccgcgggcgc cgctgcgccg
      601 aaagccatca ccgccgcgat ggccaggccg gaaaggatgt gccgcatctg ctgcccccaa
      661 atctgtcttt ggcgcgacac tagcgcatgc atgtgcgtcg cgccaccgtg cccgacgcgt
      721 catcgctgcg tccgaacccg cccagccgca ccgacaggtc gaagctggtt tcggggcgca
      781 cgctgtccga ggcggtgaag cgccgcgaga cacccatttc catcgtcagg cactcgttgc
      841 gataggccag atccagcgac gcgctttgcg cccggtcggc cacgaagtcg tagcgggttt
      901 ccgcgttggc ccaccagccg cgcctgacct gccagccgac attgcccgtc aattcgctga
      961 tatcgctgtc ccggccctcg gcggcgtcgc tgtcgatcca cagatgtccg gccgaaacct
     1021 gcagatccgg ccgcagcagg ccaagccgca attcgttgcg cgaaatgttg aaatcgtcgt
     1081 cgaacagggc ccggttggcg atcgccagcc cgttgccgct gtcgtaattc gcggccacca
     1141 accagtccga ccgccgcccg gccagcggcg aatcgggcgc gaaggcccga tcgggacggt
     1201 tgcgcagcac gcggccggcg gtcaggccca gcgaccagcc ggtcggatcg atccgggtcc
     1261 agctgagtcc cagattggcc ctgagtcctg tctcgcgggc atcataaccg ggaaagcggt
     1321 tgtccgagaa aaggttgcct tcgtcgaact cgatcaggcg actgtcttcg ttcgggatct
     1381 ccttgtcgct gccgggcggg ctccacagca attgggcgac aggttcgacc agatgggtcg
     1441 cgccgccgct gccgccgatc agcggccagc gcagttcgac gccgatccgg gggtcgacgc
     1501 gggtctcgac atcgtcatat cggctgtcct gcgcgatccg gtagagatcg gcatccagcc
     1561 ccgcgatggc cgcgccgaca agaccgcccg gcaggatttc ctgccgccgc caatccagcc
     1621 cgaccgagcc gcgcgccacg tcccgcccga cctgatcggc atccgacggc cgacgatggg
     1681 catgggcgga ccattccatc agtccctggc caccgatcag atccgggacg aagcggcgct
     1741 gccagatcac atcggcgacc tgcgcgggcg aggtggcgtt gttttcatcg tcgcgcagtg
     1801 attcgtagtt cccgacgcgg ccgaagaaca gcttttcgcg ggtgatccgc tccagcgaga
     1861 tgccgctcca cagccggtcg gcatcggtaa tgccgtaatc cagcagatag ccgcga
//
LOCUS       DTVW01000593            1009 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1718735, whole
            genome shotgun sequence.
ACCESSION   DTVW01000593 DTVW01000000
VERSION     DTVW01000593.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1009)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1009)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1009
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1718735"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1009)
                     /gene="hscA"
                     /locus_tag="EYO87_07810"
     CDS             complement(<1..>1009)
                     /gene="hscA"
                     /locus_tag="EYO87_07810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011329312.1"
                     /note="involved in the maturation of iron-sulfur
                     cluster-containing proteins; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Fe-S protein assembly chaperone HscA"
                     /protein_id="HIC65886.1"
                     /translation="SQYAKVNVVLEFDEQKHTVEVTRETFDELAMPLVKKTLRSCRRA
                     VKDAGIENEEVLQVVMVGGSTRMPLVRSQVEGFFEKEPLTSIDPDRVVALGAALQADV
                     LVGNKPDSDMLLLDVLPLSLGLETMGGLVEKIIPRNTTIPVARAQEFTTFKDGQTAMS
                     LHVLQGERELVDDCRSLAKFSLKGIPAMAAGAAHIRVTFKVDADGLLSVSAMEKSTGV
                     QAEIQVKPSFGLSDDQVANMLKESMSNAKDDMQARMLKEQQVEALRVIEALEASLASD
                     GDLLDDIQLANLKAEISELAKVRETAQQPGEIKAAIEKVDNASSDFASRRMDASIKKA
                     LT"
BASE COUNT          253 a          246 c          206 g          304 t
ORIGIN      
        1 gtaagggcct ttttaattga tgcatccatt ctgcgcgagg caaaatcgct gctagcgtta
       61 tctacttttt caattgcggc tttaatttca cctggctgct gcgcggtttc gcgcacttta
      121 gcaagctcgc ttatttcagc ttttaaatta gcaagttgaa tatcgtcgag caagtcaccg
      181 tcgctagcaa gtgacgcctc tagtgcttct ataacacgta gcgcctctac ttgttgctct
      241 ttaagcatac gtgcttgcat gtcatcttta gcgttgctca ttgactcttt gagcatgtta
      301 gccacttggt catcagataa gccaaacgat ggtttaactt ggatttcagc ttgcacacca
      361 gttgattttt ccattgctga tacacttaac aagccatcgg catccacttt aaaggtaact
      421 cgaatatgtg cagcgcctgc agccatagcc ggtatgcctt ttaaactaaa tttagccagc
      481 gagcggcaat cgtcaaccag ttcgcgctca ccttgtagca catgtaaaga cattgccgtt
      541 tggccgtctt taaaggtagt aaattcttgc gcacgagcaa caggaatagt ggtattacgc
      601 ggaattattt tttcaactaa cccacccatc gtttcaaggc caagcgacag tggcaataca
      661 tcaagtaata gcatgtcaga atcgggcttg ttacctacta atacatcagc ttgtaatgca
      721 gcacctagtg caacaacacg atccgggtcg attgatgtta gcggctcttt ttcaaaaaag
      781 ccttcaactt ggctgcgaac cagtggcatg cgagttgaac cacctaccat tacaacttgc
      841 agcacttctt cgttttcgat gccagcatct tttactgcac gacgacacga acgaagtgtt
      901 tttttaacaa gtggcatagc cagctcgtca aaagtttcgc gtgtcacttc tacggtgtgt
      961 ttttgctcgt caaattcaag cactacattt acttttgcat actggctta
//
LOCUS       DTVW01000594            2604 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1718802, whole
            genome shotgun sequence.
ACCESSION   DTVW01000594 DTVW01000000
VERSION     DTVW01000594.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2604)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2604)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2604
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1718802"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(59..1231)
                     /locus_tag="EYO87_07815"
     CDS             complement(59..1231)
                     /locus_tag="EYO87_07815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007802773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="decarboxylase"
                     /protein_id="HIC65887.1"
                     /translation="MAVAADILAGYAALDDPEKRIFFEGLRDGFDPDHAALARAAKVW
                     LDKGSPADLEALSRLAEPPRQELLRRLNMAQGGTVRLVGMRADLLRLTGRDRTFARVD
                     ADFRHLLRSWFNRGFLQLLRIDWHSPALLLEKLIEYEAVHEIRDFRDLQRRVLPVDRR
                     CYAYMHPAMPDEPLIFVEVALTRGLPDSVQALIDESRAPLDPEDADTAVFYSISNCQS
                     GLAGISFGNLLIKNVVAELSRELPELATFVTLSPIPGLRAWLEERAAAGEAEATALLR
                     DPQPGPLTAQTARYLLLAKDAKGRPRDPVARFHLGNGAEAHRLIAGADISDRGTRQSL
                     GMMVNYLYDRRRIEAQHDDFTERGIIAAPKRLQDIARKAEIEAAPAGRRTKTDSKT"
     gene            complement(1378..>2604)
                     /locus_tag="EYO87_07820"
     CDS             complement(1378..>2604)
                     /locus_tag="EYO87_07820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018700725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease"
                     /protein_id="HIC65888.1"
                     /translation="VAVAALVLSEGFSAIGGLSETFFAGLANFGMVSVPMFILMGAAV
                     ASSPAGRDLYEALDRWLYRVPGGMVMSNIGACALFAALSGSSPATCAAIGKMGIPEMT
                     KRGYPDSLAAGSIAAGGTLGILIPPSVTMIVYGISTETSIGRLFLAGLLPGLMLTVLF
                     MAWALIDCWRKGIALGDVTRRYSLAERLENLPRVLPFLLIVAAILFVLYGGVATPSEA
                     AGTGALICILLVAIIYRMWRAGPMIAIFRDTIREAVMIMLIIGAAELFAFALSSLFIT
                     QTVAGAIADLEVNRWILLIVIQLFLLVAGFFLPPVAIILMSAPILMPILDSAGFDPYW
                     FAVILTINMEIGLITPPVGLNLYVINGIAPQISLRDILYGSLPFVGMMVLGMVLLSIF
                     PQIALFLPDLIMGPAL"
BASE COUNT          493 a          855 c          875 g          381 t
ORIGIN      
        1 aggaaatcgc gcgcctcgcc cttgtgcggg gccatcaatg cgtcgaaaag cgtgttcgtc
       61 atgtcttgct gtccgttttg gtccgtctgc cggccggggc ggcctcgatc tcggccttgc
      121 gcgcgatgtc ctgcaaccgc ttcggcgcgg cgatgatacc gcgttcggtg aaatcgtcgt
      181 gctgggcctc gatccggcgc cggtcataga ggtagttgac catcatcccg aggctttgcc
      241 tcgttccccg gtccgaaatg tcggcgccgg cgatcagtcg gtgcgcctcg gcgccgttgc
      301 ccaggtgaaa gcgggccacc ggatcgcggg gccggccttt ggcatccttg gccagcagaa
      361 ggtagcgcgc ggtctgtgcg gtcagcgggc cgggctgcgg atcgcgcagc agggcggtgg
      421 cctcggcctc gcccgcggcg gcccgttcct ccagccaggc gcgcaggccg ggaatcggcg
      481 acagcgtgac gaaggtcgcc agttcgggca attcgcggga cagttcggcg accacgttct
      541 tgatcagcag attgccgaaa ctgatgcccg ccagccccga ctggcagttc gatatggaat
      601 agaagacggc cgtatcggcg tcttcggggt ccagcggtgc acggctttcg tcgatcagcg
      661 cctgcacgga atcgggcagc ccgcgggtca gcgcgacctc gacgaagatc agcggctcgt
      721 cgggcatggc gggatgcata taggcatagc agcgccgatc caccggcagg acccggcgct
      781 gaagatcgcg gaaatcgcgg atctcgtgga ccgcctcgta ttcgatcagc ttttccagca
      841 gcaaggccgg gctgtgccag tcgatgcgca gcaattgcag aaatccgcga ttgaaccagg
      901 atcgcagcag gtgacggaaa tcggcatcga cgcgggcaaa ggtccggtcg cggcccgtca
      961 gccgcagcag gtcggcgcgc atccccacca gccggacggt cccgccctgc gccatgttca
     1021 gccgccgcag caattcctgg cgcggaggct cggccaagcg cgacagggct tccagatcgg
     1081 cgggcgatcc cttgtccagc cagacctttg cagcccgggc cagcgccgcg tggtcggggt
     1141 cgaaaccgtc gcgcaggccc tcgaagaaga tgcgcttttc gggatcgtcc agcgcggcat
     1201 agcccgccag gatatccgcc gcgaccgcca tgccgcgggt ttccgattgc agttccgtca
     1261 gcgcgcgcgc ggccccgatc agcgcatccg gcgccggcgg cggcgtgccc ttgccgcgcc
     1321 gccagccgga actgacgaca aggctgctga ggcggtcata gagctgcgcc gtcagcgtca
     1381 tagcgcgggc cccatgatca gatccggcag gaacagggcg atctgcggaa agatcgacag
     1441 cagcaccatg cccagcacca tcatcccgac gaagggcagc gagccgtaga gaatgtcgcg
     1501 cagcgaaatc tgcggcgcga tcccgttgat gacatagagg ttcagcccca ccggcggcgt
     1561 gatcagcccg atctccatgt tgatcgtcag gatgaccgcg aaccagtagg gatcgaagcc
     1621 cgccgaatcg aggatcggca tcaggatcgg cgccgacatc aggatgatgg cgaccggcgg
     1681 caggaagaag cccgcgacca gcagaaaaag ctggatcacg atcagcagga tccagcgatt
     1741 gacctccaga tcggcgatgg caccggcgac ggtctgggtg atgaacagcg aggacagggc
     1801 aaaggcgaac aattcggccg caccgatgat cagcatgatc atcaccgcct cgcggatggt
     1861 gtcgcggaag atcgcgatca tcgggcccgc ccgccacatc cggtagatga tcgcgaccag
     1921 caggatgcag atcagcgcgc cggtgccggc cgcctccgag ggcgtggcga caccgccata
     1981 aagcacgaac aggatggcgg ccacgatcag caggaagggc agcacgcggg gcaggttctc
     2041 aagccgttcg gccagcgaat agcgccgcgt cacatcgcca agcgcgatcc ccttgcgcca
     2101 gcaatcgata agcgcccagg ccatgaacag caccgtcagc atcagccccg gcagcagccc
     2161 ggccagaaac agccgcccga tagaggtctc ggtcgatatg ccgtagacga tcatcgtgac
     2221 cgagggcggg atcaggatgc ccagcgtgcc gcccgccgcg atggatccgg cggccaggct
     2281 gtcgggatag ccgcgcttgg tcatttccgg gatgcccatc ttgccgatgg cggcacaggt
     2341 tgcggggctg ctgcccgaca gcgcggcaaa cagcgcgcag gcgccgatat tggacatgac
     2401 catgccgccc ggcacccggt aaagccagcg gtccagcgct tcgtacagat ccctgcccgc
     2461 gggcgaactg gcgacggcgg cgcccatcag gatgaacatc ggcaccgaga ccatgccgaa
     2521 attggccagc ccggcgaaga aggtttcgga cagaccaccg atggcgctga acccctcgga
     2581 caggaccagc gccgcgaccg cgac
//
LOCUS       DTVW01000595            1956 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_171892, whole
            genome shotgun sequence.
ACCESSION   DTVW01000595 DTVW01000000
VERSION     DTVW01000595.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1956)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1956)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1956
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_171892"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(51..929)
                     /locus_tag="EYO87_07825"
     CDS             complement(51..929)
                     /locus_tag="EYO87_07825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004110711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAA hydrolase family protein"
                     /protein_id="HIC65889.1"
                     /translation="MTDHPARIVAFHVNGADRYGVVTDQGIIDLTPEFGSRFKGLKEV
                     IDAGALAELVSAAEGRAPTWREEEVTYLIPIANPEKLICIGVNFPDRNAEYKDGTTDA
                     KSYPSMFIRFPRSFVGHGAALVRPPESEQLDYEGEVTIIIGKGGRRIPRDDAYDHIAA
                     ITLCNEGTIRDWVRHAKFNVTQGKNWDSSGSIGPWIVPFERAEQLDDIKLETRVNGEI
                     RQSDRTARMMYDFRYIVNYVSTFTTLVPGDVIVCGTPTGAGARFDPPIWLKPGDVIEV
                     EAEGIGILRNTVEDEA"
     gene            complement(940..>1956)
                     /locus_tag="EYO87_07830"
     CDS             complement(940..>1956)
                     /locus_tag="EYO87_07830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001328881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent succinate-semialdehyde
                     dehydrogenase"
                     /protein_id="HIC65890.1"
                     /translation="VGVVAAITPWNFPNAMITRKAGPALAAGCAMVLKPASQTPFSAI
                     ALAVLAERAGLPPGLFSVVTGSARAIGGAMTGSETARKLTFTGSTEVGIELMRQSAPT
                     VKKLALELGENAPFIVFDDADLDAAVEGAIVSKFRNNGQTCVCANRIYVQAGVYDAFA
                     QKLSAKLATLPVGDGMAEGTVFGPLIDAAAVAKVEEHIADATAQGASVASGGHRHALG
                     GTFFEPTVLTGVTQSMAIAREETFGPVAPLFRFETDDEVIALSNDTEFGLASYFYTRD
                     LARAWKVGEQLEYGMVGINTGLISTAEAPFGGIKSSGLGREGSRYGIEEFVEIKYLCF
                     GGIA"
BASE COUNT          353 a          616 c          610 g          377 t
ORIGIN      
        1 gtcttcggcg gccaaaaggt ctgcggcggc gatgtcgatc tcctccgggg tcacgcctcg
       61 tcctccacgg tgttacgcag gatgccgata ccctctgcct cgacctcgat cacgtcaccc
      121 ggcttgagcc agatcggcgg atcgaaccgt gcgcccgccc ccgtgggcgt accacagacg
      181 atcacgtctc cggggacaag cgtggtgaag gtcgagacat agttcacgat atagcggaag
      241 tcgtacatca tccgagccgt ccggtcggac tggcgtatct cgccgttcac ccgggtctcg
      301 agcttgatgt cgtccaactg ctcggcccgt tcaaagggaa cgatccacgg cccgatcgag
      361 ccggaactgt cccagttctt accctgcgta acgttgaact tggcgtggcg aacccagtcg
      421 cggatcgtac cttcgttgca cagggtgatc gcggcgatgt ggtcataggc gtcgtcacgc
      481 gggatgcggc gaccgccttt gccgatgata atggtcactt cgccttcgta atccagctgc
      541 tcgctttctg gcgggcgcac cagtgccgcg ccatgtccga caaaggaccg gggaaaacgg
      601 atgaacatcg acggatagga tttagcgtct gttgtgccgt ccttgtattc ggcattgcgg
      661 tcgggaaagt tcacaccgat gcagatcagc ttttccgggt ttgcgatcgg gatgaggtag
      721 gtgacctctt cctcgcgcca cgtcggggca cgtccttctg cggccgagac caactcggcc
      781 agtgcaccgg cgtcgatgac ctctttcagg cccttgaagc ggcttccgaa ttcgggtgtc
      841 aggtcgatga tcccctgatc ggtgacgacg ccatagcgat ccgcgccatt gacgtgaaac
      901 gcgacgatgc gggcagggtg atcggtcatg gcgacgtcct catgcaattc cgccgaagca
      961 gagatatttg atttcgacga attcctcgat gccatagcgc gatccctcac gtcccagccc
     1021 tgaggatttg atgccgccga agggggcttc ggcggtcgag atcaggccgg tgttgatgcc
     1081 gaccatcccg tattcgagct gctcaccgac cttccacgcc cgcgccagat ctcgggtgta
     1141 aaaatagctg gcgagaccga actcggtgtc gttcgacaag gcgatgactt cgtcatctgt
     1201 ttcgaaccgg aagagcggcg cgacgggtcc gaaagtttcc tcccgcgcga tcgccatact
     1261 ctgggtgacg ccggtcagca cggtcggctc gaagaacgtg ccgccgagcg cgtgacggtg
     1321 tccgcccgag gcaaccgagg cgccctgcgc ggtggcatcc gcgatgtgct cttcgacctt
     1381 ggccacggca gcggcgtcga tcagcggtcc gaagacagtg ccctcggcca taccgtcacc
     1441 gacaggcagg gtggcaagct ttgccgagag cttctgggcg aaggcgtcat agactccggc
     1501 ctgcacgtag attcggttcg cgcagacgca ggtctggccg ttgttgcgga acttcgagac
     1561 aatcgccccc tcgactgccg catcgagatc ggcgtcgtca aagacgataa aaggtgcgtt
     1621 ttcccccagt tcgagcgcaa gtttcttcac cgtcggcgcc gactggcgca tcagctcaat
     1681 cccgacctcg gtcgagccgg tgaaagtcag tttgcgtgcg gtctcactgc cggtcatcgc
     1741 gccgccgatg gcacgcgccg atccggtcac gaccgagaag agaccggggg gcaggcccgc
     1801 gcgctctgcc aacactgcca gcgcgatggc cgaaaacggg gtctgcgacg cgggtttcag
     1861 caccatggcg cagccagcgg ccagagccgg gccggccttg cgagtgatca tggcgttcgg
     1921 gaaattccac ggcgtaatcg ctgccaccac gcccac
//
LOCUS       DTVW01000596            1035 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1719041, whole
            genome shotgun sequence.
ACCESSION   DTVW01000596 DTVW01000000
VERSION     DTVW01000596.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1035)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1035)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1035
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1719041"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..531)
                     /locus_tag="EYO87_07835"
     CDS             complement(<1..531)
                     /locus_tag="EYO87_07835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019369835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HIC65891.1"
                     /translation="MSAEFNGTSWRITLPCTRAEAEAIDSASDLAIDAVLMTTEEVED
                     DVERWRLDAYVEHKPDAAMLATIHALVPSASGHDPVVTQLGDEDWIAMSQAGLEPIRE
                     GRFVVHTSAHPVAAPAGGRAFLIDAGQAFGTGHHGTTSGCLAMLDGLAVAGKTFTRAI
                     DVGTGTGLLAFAAVELW"
     gene            complement(521..>1035)
                     /locus_tag="EYO87_07840"
     CDS             complement(521..>1035)
                     /locus_tag="EYO87_07840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010160559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HIC65892.1"
                     /translation="DVLINNAGVFEANPLDRASDDWVADWDRTQRINLTAAAELCRLA
                     VLHWQDRKVGGRIVNIASRAAYRGDSPAHWHYAAAKAGMVAMTKTIARAYAKDGILAF
                     AICPGFTMTGMADDYLASRGGDKLLADIPLGRVADPDEVATLARFCALEAPASMTGAV
                     LDINGASYVR"
BASE COUNT          158 a          351 c          366 g          160 t
ORIGIN      
        1 ccatagctca accgcagcga aggcgagcag gccggtgccg gtgccgacgt cgatcgcgcg
       61 ggtgaaggtc ttgcccgcca ccgccaggcc atcgagcatg gcgaggcaac cgctggtcgt
      121 gccgtgatga ccagtgccga aggcctgccc cgcatcgatc aggaaggcgc gcccacccgc
      181 gggcgccgcg acgggatgcg cgctggtgtg gacgacgaag cggccttcgc ggatcggctc
      241 cagccccgcc tggctcatcg cgatccaatc ctcgtcgccc agctgcgtca ccaccggatc
      301 gtggccgctc gcgctcggca ccagggcgtg gatcgtcgcg agcatcgccg catcgggctt
      361 atgctcgaca taggcgtcga gccgccagcg ctcgacatcg tcctccacct cttcggtggt
      421 catcagcacc gcatcgatcg cgagatcgga cgcgctgtcg atcgcttccg cctcggcgcg
      481 ggtgcagggc agggtgatcc gccagctcgt gccgttgaac tcagcggaca taggaggctc
      541 cattgatgtc gagcaccgcg ccggtcatcg aggcgggggc ttcgagcgcg cagaagcggg
      601 cgagcgtcgc cacctcatcc ggatcggcga cgcggcccag cggaatgtcg gcgagcagtt
      661 tgtcgccacc ccggctggcc agataatcgt cggccatgcc ggtcatggta aagccggggc
      721 agatcgcgaa ggcgaggatg ccgtccttcg cataggcgcg cgcgatcgtc ttggtcatcg
      781 cgaccatgcc cgccttggcc gcggcataat gccagtgcgc ggggctgtcg ccgcgatagg
      841 cggcgcggct ggcgatgttg acgatgcggc cgccgacctt ccggtcctgc cagtggagca
      901 cggcaaggcg gcagagctcg gcggcggcgg tcaggttgat gcgctgcgtc cggtcccagt
      961 cggcgaccca gtcgtcggac gcgcggtcca gcggattggc ctcgaacacg ccggcattgt
     1021 tgatcaggac gtcga
//
LOCUS       DTVW01000597            2390 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1722824, whole
            genome shotgun sequence.
ACCESSION   DTVW01000597 DTVW01000000
VERSION     DTVW01000597.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2390)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2390)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2390
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1722824"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..729
                     /locus_tag="EYO87_07845"
     CDS             <1..729
                     /locus_tag="EYO87_07845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007205278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-keto-5-aminohexanoate cleavage protein"
                     /protein_id="HIC65893.1"
                     /translation="GPGELDIPAIRGVGGSVLHFIDAKSGLDDVWRIEFQATGDSATD
                     FGLIRVDHLAETMNYEDMLSWTLFYTAIFDMDRRPMIDVADPDGLVRSQAIASRDGAT
                     RITLNGAQSHRTLAGGFLADSMGSAVQHIALASRDILASARAMAGAGFQPLEIPENYY
                     DDLQARYGLDDDRIARLRRWNILYEAEGEAEFYQFYGRPLTGGLFFEIVERRGGYDGY
                     GAANAPFRIAALKRLLRAKDMPRA"
     gene            876..1709
                     /locus_tag="EYO87_07850"
     CDS             876..1709
                     /locus_tag="EYO87_07850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011800962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HIC65894.1"
                     /translation="MISGHTKLIAHLGVPTESFKAPMIYNPWFEARGIDTVVVPMGCE
                     TADFPAFMPLLARLRNFAGALITMPHKVAVVDLLDQVSTAVRICGACNAVRRDEAGAL
                     IGDMFDGEGFVRGVLRKGRAVAGASVLVVGTGGVGSAIAASLAGAGAARLALFDINAA
                     SADRLAAKLQEACPALRVETGRNDPAGFDIVVNATPMGMAEGDPMPMPVERLSPRTFV
                     GEVVMKREETAFLAAARARGCLTQIGTDMLFEQIPAYLEFFGYPTTSADELRRLARIR
                     Y"
     gene            1780..>2390
                     /locus_tag="EYO87_07855"
     CDS             1780..>2390
                     /locus_tag="EYO87_07855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009492542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HIC65895.1"
                     /translation="MTRSEGDRVLTDSDIAELIAWRRDLHRRPELSGDERQTAARVAA
                     AMRHAGADRIATGLGGFGVAAIFEGLSRGCTVMLRCELDGLPIQEQGAHDWCSQSAGK
                     GHLCGHDGHMAILAAVARWLGRNRPPRGRAILLFQPAEEDGSGAAKVIADPQFAGLVP
                     DYALSLHNMPGVPQGHALLAEGPMNCASRGMKIALTGRTAHAS"
BASE COUNT          369 a          812 c          830 g          379 t
ORIGIN      
        1 ggccccggcg aactggacat cccggcgatt cgcggcgtcg gcggatcggt gctgcatttc
       61 atcgacgcga aaagcggcct cgatgatgtc tggcggatcg aattccaggc caccggcgac
      121 agcgcgaccg atttcggcct gatccgcgtc gatcatctgg ccgagacgat gaattacgag
      181 gacatgctca gctggacgct gttctacacc gccatcttcg acatggaccg ccggccgatg
      241 atcgacgtgg ccgatcccga cgggctggtg cgcagccagg ccatcgcatc ccgcgatggc
      301 gccacgcgga tcaccctgaa cggcgcccaa tcgcaccgca cgctggccgg cggttttctg
      361 gccgacagca tgggatcggc cgtgcagcat atcgcgctgg ccagccgcga catccttgcc
      421 agcgcccggg cgatggcggg cgcggggttc cagccgctgg aaatcccgga aaattactac
      481 gacgatcttc aggcgcgcta tgggctggac gacgaccgca tcgcccgcct gcgccgctgg
      541 aacatcctct acgaggccga gggcgaggcc gagttctatc agttctacgg gcgcccgctg
      601 accggggggc tgttcttcga gatcgtcgag cggcgcggcg ggtatgacgg ctatggcgcc
      661 gcgaacgcgc ccttccgcat cgccgcgctg aagcggctgt tgcgtgccaa ggacatgccg
      721 cgtgcgtgat cggggctgcc ccaccggcct cgcccccgcc ggcgcagccc caaccccgcc
      781 ggccccctgc caaaccccga cggccccgcc ccgcctttcg gcaatgtgtt cccggcacga
      841 cccgatcttg aaccgatcct gaaggacagg aaccgatgat ctctggccat accaaattga
      901 tcgcccatct tggcgtgccg acggaaagct tcaaggcgcc gatgatctac aacccctggt
      961 tcgaggccag gggcatcgac accgtggtcg tgccgatggg atgcgaaacg gcggactttc
     1021 cggccttcat gccgctgctt gcgcgcctgc gcaacttcgc gggcgcgctg atcaccatgc
     1081 cgcacaaggt cgcggtcgtg gacctgctgg atcaggtcag caccgccgtg cgcatctgcg
     1141 gcgcctgcaa cgccgtgcgc cgcgacgagg cgggcgccct gatcggcgac atgttcgatg
     1201 gcgaaggctt tgtgcgcggc gtgctgcgca aggggcgtgc ggtcgcgggg gcctcggtcc
     1261 tggtcgtggg cacgggcggc gtgggctcgg ccatcgccgc ctcgctggcg ggcgcgggtg
     1321 cggcgcgtct ggcgctgttc gacatcaatg ccgcctcagc cgaccgcctt gccgcgaagc
     1381 tgcaagaagc ctgtcccgcc ctgcgggtcg agaccggccg gaacgatccg gcgggtttcg
     1441 acatcgtcgt gaacgccacg ccgatgggca tggccgaagg cgatccgatg ccgatgccgg
     1501 tcgagcgtct gtcgccccgg acctttgtgg gcgaggtggt catgaaacgc gaggaaaccg
     1561 cctttctggc cgccgcccgg gcgcggggct gcctgaccca gatcggcacc gacatgctgt
     1621 tcgaacagat ccccgcctat ctggaattct tcggctatcc gaccacaagc gcggacgaat
     1681 tgcgcaggct ggccaggatc agatactgac tgccgggttg cctgccgcaa gcgggttctg
     1741 ttcaatcccg ccggcacggc agcctcagga gacagcgcca tgacccgatc cgagggcgat
     1801 cgcgtcctga ccgacagcga catcgcggaa ctgatcgcat ggcggcgcga tctgcatcgc
     1861 cgcccggaac tgtccggcga tgaacggcag accgccgcgc gggtggcggc ggcgatgcgc
     1921 catgccgggg cggaccggat cgcgaccggg ctgggcgggt tcggcgtcgc cgcgatcttc
     1981 gagggtttgt ccaggggctg cacggtcatg ctgcgctgcg agcttgacgg gctgccgatc
     2041 caggaacagg gggcgcacga ctggtgctcg caatcggcgg gcaaggggca tctttgcggg
     2101 catgacgggc atatggcgat cctggccgcc gtcgcgcgct ggctggggcg gaacaggccg
     2161 ccgcgcgggc gtgccatcct gctgttccag cccgccgaag aggatggatc gggcgcggcg
     2221 aaggtgatcg cggatccgca attcgccggc ctcgtgccgg attatgcgct gtcgctgcac
     2281 aacatgcccg gcgtgccgca gggtcacgcg ctgctggccg aggggccgat gaactgcgcc
     2341 tcgcgcggca tgaagatcgc gctgaccggc cgcaccgccc atgcctcgca
//
LOCUS       DTVW01000598            2460 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1724095, whole
            genome shotgun sequence.
ACCESSION   DTVW01000598 DTVW01000000
VERSION     DTVW01000598.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2460)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2460)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2460
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1724095"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..612)
                     /locus_tag="EYO87_07860"
     CDS             complement(<1..612)
                     /locus_tag="EYO87_07860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase-like activity of phytase family
                     protein"
                     /protein_id="HIC65896.1"
                     /translation="MPHRRRRALGAILSVLLITAGAPAPAVTLDYIGTYVWSGTEGSF
                     GGFSGLEISADGSGFNALSDRAWLYWGRVERDAQGRIRGMNVAGRAHLKDSKGQPLKP
                     GYLGDSEGLAIARDSSIWVSFEGLDRIASYADPDAPATRRPLPPKLPDFRTNSGMEAL
                     AVRDDGLLVAIVERSSRKDRPFPVLGFRDGKWSRLGTIRRDPRW"
     gene            complement(585..1448)
                     /gene="mepA"
                     /locus_tag="EYO87_07865"
     CDS             complement(585..1448)
                     /gene="mepA"
                     /locus_tag="EYO87_07865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010391793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-insensitive murein endopeptidase"
                     /protein_id="HIC65897.1"
                     /translation="MIRKFLTAAALLAGLAAPLSAQSLAKDVFGNFRGASQGPPVSIG
                     YYSKGCGQGFAQLPESGPSWQAMRLSRNRNWGHPELVDFLVGLSRVAQQAGWRGLYIG
                     DMSQPRGGPMTSGHASHQIGLDADVWMLPPSSLALSPAQRERISSASVVARGGTALSP
                     NFNGGHMTILRAAARDPRVERIFTDPVVKVAMCQLEKGDRGWLRKIRPLNGHESHFHV
                     RLDCPPGSICQDQEPPPPGDGCAEAAEWIRNRIDPSRVKPAPPNPNYRHPRTYRMAEL
                     PAQCRTVAGAR"
     gene            complement(1445..>2460)
                     /locus_tag="EYO87_07870"
     CDS             complement(1445..>2460)
                     /locus_tag="EYO87_07870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HIC65898.1"
                     /translation="LFGIGLIGMEFATIFTNAMLPGLAPRNEIGRLSGSGFAFGYVGG
                     VVALTLMLALFAETPSGRTLAGIAPLFGLDPETREGTRFVGPFVAIWYAIFMVPFFLW
                     VREPRGPRARIRLGAAMRDLGRLIGSLRHRRSLAAWLVSSMLSRDALNALYGFGGVYA
                     GTVLGWPVFLAGIFGVVSAVSAAIISWLGGRADRRWGPRPVIAACMLILIAVCIVIIS
                     MDRDTFLGMAVPDGPVVAGLRLPDAIFFLCGALIGGAGGALQAASRTMMVRHTTADKA
                     TEGFGLYALSGKATAFLAPFLIATVTDLTGNQRIGISPLIAMFLLALVLLGWVKPEGE
                     AKQ"
BASE COUNT          440 a          833 c          842 g          345 t
ORIGIN      
        1 ccagcgcgga tcccggcgga tcgtgcccag gcggctccat ttgccgtcgc ggaaacccag
       61 gactggaaac ggccggtcct tgcgcgagga tcgttcgacg atcgcgacca gcaatccgtc
      121 atcgcgaaca gccagcgcct ccatccccga attggtgcgg aagtcgggca gtttcggcgg
      181 caagggccgg cgggtcgcgg gcgcatcggg atcggcatag ctggcgatcc ggtccagacc
      241 ttcgaaactg acccagatgc tgctgtcgcg cgcgatcgcc aagccctcgc tgtcgcccag
      301 atagcccggc ttcagcggtt gtcccttgct gtccttcaga tgggcgcgcc cggcgacatt
      361 catgccccgg atgcggccct gcgcgtcgcg ttcgactctg ccccaataca gccaggcgcg
      421 gtcgctgagg gcgttgaagc cggacccgtc ggcactgatc tccagcccgg aaaagccgcc
      481 gaaactgcct tcggtgcccg accagacata ggttccgatg taatccagcg tcacggccgg
      541 cgcgggggcg ccggccgtga tcagcaggac ggacaggatg gcgcctagcg cgcgccggcg
      601 acggtgcggc attgggcagg caactcggcc atgcgatagg tgcggggatg gcggtaattc
      661 ggattgggcg gggcgggttt cacgcggctg gggtcgatcc ggttcctgat ccattcggca
      721 gcctcggcgc aaccatcgcc cgggggcggc ggttcctgat cctgacagat cgagccgggc
      781 ggacagtcaa gccggacatg gaagtgggat tcatgcccgt tcaggggccg gatcttgcgc
      841 agccagcctc ggtcgccctt ttccaactgg cacatcgcga ccttgaccac ggggtcggta
      901 aagatccgct cgacccgcgg atcgcgggcc gcggcgcgca ggatcgtcat gtgcccgccg
      961 ttgaaattcg gcgacagcgc cgtgccgccc ctggccacga ccgaagccga ggagatgcgt
     1021 tcccgctgcg ccgggctcag cgccagcgag gagggcggca gcatccagac atcggcgtcc
     1081 agcccgatct gatggctggc atggcccgag gtcatcggcc cgccgcgagg ctggctcatg
     1141 tcgccgatat agaggccgcg ccagccggcc tgctgtgcaa cgcgggacag gccgaccagg
     1201 aaatcgacca gttcgggatg gccccagttg cggttgcgcg acagtcgcat ggcctgccag
     1261 cttggcccgg actcgggcag ttgcgcgaag ccctggccgc agcccttgga ataatagccg
     1321 atcgataccg gcgggccttg cgaggcgccg cggaagttgc cgaacacgtc cttggccagc
     1381 gactgggccg acagcggtgc ggcaagccct gccaacaggg cggctgcggt caggaacttg
     1441 cggatcactg ctttgcctct ccttcgggtt tgacccagcc tagcagaacc agcgccagaa
     1501 gaaacatcgc gatcaggggc gagatgccga tgcgctgatt gccggtcaga tcggtgaccg
     1561 tcgcgatcag gaacggcgcc aggaacgcgg tggccttgcc cgaaagcgca tagaggccaa
     1621 agccttctgt cgccttgtcc gcggtggtgt ggcggaccat catcgtgcgg ctggccgctt
     1681 gcagcgcgcc gcccgcgccg ccgatcagcg ccccacacag aaagaagatc gcatcgggca
     1741 ggcgcagccc ggccacgacc gggccgtccg gcaccgccat gccaaggaag gtgtcgcgat
     1801 ccatgctgat gatcacgatg cagaccgcga tcaggatcag catgcaggcc gcgatgaccg
     1861 ggcgcgggcc ccagcgtcgg tcggcgcgcc cgccgagcca actgatgatc gcggccgaga
     1921 cggcgctgac cacgccgaag atacccgcca gaaagaccgg ccagcccagc acggtgccgg
     1981 catagacgcc gccgaaaccg tatagcgcgt tcagcgcgtc gcgcgacagc atcgacgaga
     2041 ccagccaggc cgccaggctg cggcgatggc gcaggctgcc gatcagccgt cccagatcgc
     2101 gcatcgcggc gcccagcctg attcttgcgc gcggcccgcg cggctcgcgg acccacagga
     2161 agaacggcac catgaagatg gcataccaga tcgccacgaa aggcccgaca aagcgcgtcc
     2221 cctcgcgggt ctcgggatcc agaccgaaaa gcggcgcgat cccggccagc gtccggcccg
     2281 acggcgtttc ggcgaacagg gccagcatca gcgtcagcgc gacgacgccg cccacatagc
     2341 cgaaggcaaa gcccgacccg gacaggcgcc cgatctcgtt gcgcggggca aggccgggca
     2401 acatggcatt ggtgaagatg gtggcgaatt ccatgccgat caggccgatg ccgaacagcg
//
LOCUS       DTVW01000599            1450 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1724529, whole
            genome shotgun sequence.
ACCESSION   DTVW01000599 DTVW01000000
VERSION     DTVW01000599.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1450)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1450)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1450
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1724529"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>1450
                     /locus_tag="EYO87_07875"
     CDS             <1..>1450
                     /locus_tag="EYO87_07875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011749161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="host specificity protein"
                     /protein_id="HIC65899.1"
                     /translation="AVGASIGGGFGGAFLGMSGAVVGRAIGATVGRALDQRLLGGGSK
                     AVETGRIDRLRLQTAGEGAPIPRIWGQMRVPGHVIWASPLDEISTTESAGGGKGAPQA
                     KVTQISYRLSVALALCEGRILGVGRVWADGEEIAASDLNMRVYRGSETQMPDPAIEAH
                     EGADTPAYRGVAYVVLEDLVLERWGNRMPQLSFEVTCAAQDGSGLCRDVRAVALIPGT
                     GEYSLATSHVTQDLGLGEVRSVNTNTPMGGTDFSVSMDILGRELPKVGSVSLVVSWFG
                     NDLRIDRCKIQPKVEQREIDGSEMPWRAGGIDRTSAAEVAQVDGRPIYGGTPSDQSVT
                     EALVAIENSGRKAVFYPFILMEQLGGNELPDPHGAVEQPVMPWRGRITTSIAPGRADT
                     TDSTEAAVDEVATFFGQADGADFTADGQKITYHGPAEWSYRRFILHYAHLCAAAGGID
                     AFLIGSEMIGMTQIRGPQNIYPAVAQLRRLAA"
BASE COUNT          260 a          408 c          515 g          267 t
ORIGIN      
        1 ccgcagtggg tgcatccatc ggcggcgggt tcggcggcgc gtttctgggc atgtcgggcg
       61 ccgtggtcgg ccgggcgatc ggagcgacgg ttggccgcgc cctggaccag cgcctgctgg
      121 gcggtggctc gaaagcagtt gaaacgggtc ggatcgaccg gctgcgattg cagactgcgg
      181 gcgagggcgc accgatcccg cggatctggg gccagatgcg ggtgcctggt catgtcatat
      241 gggcgtcgcc gctggatgag atcagcacga cggaaagcgc aggcgggggc aaaggcgcgc
      301 cgcaggcaaa ggtcacgcag atcagctatc ggctttctgt cgctctggcc ctgtgcgagg
      361 ggcggatcct gggcgtcggc cgggtctggg ccgatggaga agaaattgcg gcttcggatc
      421 tgaacatgcg ggtctatcgc ggcagcgaaa cgcagatgcc cgatccggcg atcgaggcac
      481 atgaaggcgc ggacacgccg gcctatcgcg gcgtggccta tgtggttctg gaagatctgg
      541 tcctggaacg ctggggcaac agaatgccgc agctgagctt cgaggtgacc tgcgcggcgc
      601 aggacggctc gggtctttgc cgcgacgtcc gggctgtcgc cctgataccg ggaaccggcg
      661 aatattcttt ggcgacaagt cacgttacgc aggatctggg gctgggcgag gttcgttcgg
      721 tcaatacgaa cacgcccatg gggggcactg atttcagtgt ctcgatggat attctgggcc
      781 gggaattgcc gaaggtcggt tcggtctcgc ttgttgtttc atggttcgga aacgacctgc
      841 ggatcgaccg ctgcaagatt cagcctaagg tcgagcagcg cgagattgac gggtccgaga
      901 tgccttggcg tgccggcgga atcgacagga catcggcagc cgaggtcgcg caagtcgacg
      961 gtcggccgat ctatggcggc actccgtcgg atcaatctgt gaccgaggcg ctggtggcca
     1021 tagagaattc cggaagaaag gcggtcttct atccgttcat cctgatggag cagcttggcg
     1081 gaaacgaact gcccgacccc catggcgcgg ttgagcaacc ggtcatgccg tggcgcgggc
     1141 ggatcaccac atcgatcgca ccgggacggg ccgacacgac ggattcgacc gaagcggcag
     1201 tcgatgaagt cgcgaccttc tttggtcaag ccgacggggc cgattttacc gcagacgggc
     1261 agaagattac ctaccacggt ccggccgaat ggtcctaccg ccggttcata ttgcattacg
     1321 cgcatctctg tgcggctgcc ggcgggatcg acgcctttct gatcggttcc gaaatgatcg
     1381 gaatgactca gatccgggga ccgcagaaca tctatcccgc ggtcgcgcaa ttgcgacgtc
     1441 tcgcggctga
//
LOCUS       DTVW01000600            2222 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1725291, whole
            genome shotgun sequence.
ACCESSION   DTVW01000600 DTVW01000000
VERSION     DTVW01000600.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2222)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2222)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2222
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1725291"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..935
                     /locus_tag="EYO87_07880"
     CDS             <1..935
                     /locus_tag="EYO87_07880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018000115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="protein meaA"
                     /protein_id="HIC65900.1"
                     /translation="VNELKDGARGELRLLDEMGGAIAAIDYMKSRLVEANAERLNRVE
                     AGETVVVGVNRWQQGEPSPLTAGDGGIMVVDPAVEQDQIDRLAEWRAGRDDAAVKSAL
                     DALRAAASGGRNVMEPSIAAAKAGVTTGEWAGVMRAVHGEYRGPTGVSASPSNRTEGL
                     EDIREAVDAVSTRLGRRLKFVVGKPGLDGHSNGAEQIAFRARDCGMDITYEGIRLTPE
                     QIVTAAQDQQAHVVGLSILSGSHLPLIENLLDRMRGAGLGHVPVIVGGIIPDEDAARL
                     RAMGVARVYTPKDFQLNTIMMDIVALVEPGAAAA"
     gene            complement(1002..1223)
                     /locus_tag="EYO87_07885"
     CDS             complement(1002..1223)
                     /locus_tag="EYO87_07885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010437577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L31"
                     /protein_id="HIC65901.1"
                     /translation="MKKDIHPDYHMIDVKMTDGTVYQTRSTWGAEGDSLSLDIDPSSH
                     PAWTGGSSRLMDTGGRVSRFKNKYAGLGF"
     gene            complement(1235..1612)
                     /locus_tag="EYO87_07890"
     CDS             complement(1235..1612)
                     /locus_tag="EYO87_07890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011750117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19"
                     /protein_id="HIC65902.1"
                     /translation="MNLIAELEAEQIAELGKTIPDFKAGDTVRVGYKVTEGTRTRVQA
                     YEGVCIARKGGSGIGASFTVRKISFGEGVERVFPLYSTNIDAIEVVRRGKVRRAKLYY
                     LRDRRGKSARIAEKTNYKPKADA"
     gene            complement(1609..>2222)
                     /gene="trmD"
                     /locus_tag="EYO87_07895"
     CDS             complement(1609..>2222)
                     /gene="trmD"
                     /locus_tag="EYO87_07895"
                     /EC_number="2.1.1.228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018000121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HIC65903.1"
                     /translation="PAGGGAGMVIRPDVMAAALDQADPALPVIYLSPRGRPLTQARAR
                     ALAQGPGVTLVCGRFEGVDQRILDARGIEEISIGDYVLTGGELAAQVLIDATIRLIPR
                     VLGNQASLAEESFSEGLLEHPHYTRPAEWDGRRIPDVVMSGNHAAIATWRRDEAERLT
                     KERRPDLWRAYEETRMDPAKDRQLSGASDQSRKHREHDKEPKR"
BASE COUNT          349 a          694 c          799 g          380 t
ORIGIN      
        1 aggtgaacga gttgaaggat ggcgcgcgcg gcgaattgcg cctgctggac gagatgggcg
       61 gcgccatcgc ggccatcgac tacatgaaat cgcggctggt cgaggccaat gccgaacggc
      121 tgaaccgggt cgaggcgggc gagacggtgg tggtcggcgt caatcgctgg cagcagggcg
      181 agccatcgcc gctgacggcc ggcgatggcg ggatcatggt cgtcgatccg gcggtcgaac
      241 aggaccagat cgaccggctg gccgaatggc gcgcgggccg ggacgatgcg gcagtcaagt
      301 ccgcgctgga cgccctgcgg gcggcggcgt cggggggacg gaacgtgatg gagccatcca
      361 tcgcggcggc gaaggcgggc gtgacgacgg gcgaatgggc gggcgtgatg cgcgcggtgc
      421 acggcgaata tcgcggtccc acaggcgtgt cggccagccc ctcgaaccgg accgaggggc
      481 tggaggatat ccgcgaggcc gtcgatgcgg tcagcacgcg gctgggccgg cggctgaaat
      541 tcgtggtcgg caagccgggg ctggacgggc attccaacgg tgccgaacag atcgcctttc
      601 gtgcccgcga ttgcggcatg gacatcacct acgaggggat ccggctgacg cccgaacaga
      661 tcgtgaccgc ggcgcaggat cagcaggcgc atgtcgtcgg cctgtcgatc ctgtcgggca
      721 gtcacctgcc gctgatcgag aatcttctgg accggatgcg cggggccggg ctgggtcatg
      781 tcccggtgat cgtcggcggc atcatccccg acgaggacgc cgcgcgactg cgcgcgatgg
      841 gcgtcgcccg cgtctatacg cccaaggatt tccagctgaa cacgatcatg atggatatcg
      901 tggccctggt ggaaccgggg gcggcggcgg catgaaggct gcttgcgaaa tgcaggacgc
      961 cgcccgaagg ggcggcgtcc cgatggcgtg gcgaggggcg atcagaagcc caggccggca
     1021 tacttgttct tgaaccggga cacacggccg ccggtgtcca tcaggcgcga ggaaccgccg
     1081 gtccaggccg ggtggctgga cggatcgatg tccagcgaca gcgaatcgcc ctcggcgccc
     1141 caggtcgaac gggtctggta gacggtcccg tccgtcatct tgacgtcgat catgtgataa
     1201 tcggggtgga tgtctttttt catcggatga cctctcaggc gtcggctttg ggcttgtaat
     1261 tggtcttttc ggcgatgcgg gccgatttgc cgcggcggtc gcgcaggtaa tacagcttcg
     1321 cacgccgcac cttgccgcga cgcaccacct cgatcgcgtc gatattggtc gaatacagcg
     1381 gaaacacacg ctccacgcct tcgccaaagc tgatcttgcg cacggtgaag ctggcgccga
     1441 tgccgctgcc gcccttgcgc gcgatgcaga cgccctcata ggcctgcacg cgggtccggg
     1501 tgccctcggt caccttgtag ccgacgcgaa cggtgtcgcc ggccttgaag tcggggatgg
     1561 tcttgccaag ctcggcgatc tgctcggctt cgagttctgc gatcaggttc atcgctttgg
     1621 ttccttgtca tgctcgcggt gtttccgcga ttggtctgat gcgcccgaga gctgtcggtc
     1681 ctttgccggg tccatacggg tttcctcgta tgcccgccac aggtcggggc ggcgttcctt
     1741 ggtcagcctt tcggcttcgt cgcgtctcca ggtggcgatg gccgcgtgat tgccagacat
     1801 gacgacatcc gggatcctgc ggccgtccca ttcggcgggg cgcgtgtagt gcgggtgttc
     1861 aagcagaccc tcggaaaagg attcctcggc cagcgacgcc tgattcccca gcacgcgcgg
     1921 tataaggcgg atggtcgcgt ctatcaagac ctgagccgcc agctctcctc cggtcaggac
     1981 ataatcgccg atgctgatct cctcgatccc gcgggcatcc agaatgcgct ggtccacgcc
     2041 ttcgaaccgg ccgcagacaa gggtcacgcc ggggccctgc gccagcgcgc gggcgcgggc
     2101 ctgggtcagc gggcgtccgc gcggcgacag atagatcacc ggcagggccg gatcggcctg
     2161 atccagcgcc gcggccatca cgtcggggcg gatcaccatg cccgcgccgc cgcccgcggg
     2221 cg
//
LOCUS       DTVW01000601            1394 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1726286, whole
            genome shotgun sequence.
ACCESSION   DTVW01000601 DTVW01000000
VERSION     DTVW01000601.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1394)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1394)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1394
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1726286"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..617
                     /locus_tag="EYO87_07900"
     CDS             <1..617
                     /locus_tag="EYO87_07900"
                     /EC_number="2.7.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012176985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="HIC65904.1"
                     /translation="GAGKGTQARRLVEGRGMIQLSTGDMLREARTSGTGMGQRVAEVM
                     DRGELVTDEIVIGLIREKLSEAGTGFIFDGFPRTLAQADALGDLLEETGMTLDSVIEM
                     RVDDEALVRRITGRFTCGNCGEVYHDDTKPTKEPGICDVCGSTDLKRRADDNEESLKT
                     RLLEYYKKTSPLIGYYYAKGKLTPVDGLADIDEVSRQIAAAFDV"
     gene            831..1199
                     /gene="rpsM"
                     /locus_tag="EYO87_07905"
     CDS             831..1199
                     /gene="rpsM"
                     /locus_tag="EYO87_07905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020042474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HIC65905.1"
                     /translation="MARIAGVNIPTGKRVPIALTYIHGIGPMYAEQICEAVGIDRARR
                     VNDLSDAEVLQIREYIDGNLTVEGDLRREVQMNVKRMMDLGSYRGLRHRRGLPVRGQR
                     THTNARTRKGPAKPIAGKKK"
     gene            1211..>1394
                     /gene="rpsK"
                     /locus_tag="EYO87_07910"
     CDS             1211..>1394
                     /gene="rpsK"
                     /locus_tag="EYO87_07910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014875982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HIC65906.1"
                     /translation="MARDKTRMKRKERKNIATGVAHVNSSFNNTKILISDVQGNAIAW
                     SSAGTMGFKGSRKSTPY"
BASE COUNT          292 a          413 c          454 g          235 t
ORIGIN      
        1 ccggcgccgg caagggcacg caggcgcggc ggctggtcga ggggcggggc atgatacaac
       61 tgtccactgg cgacatgctg cgcgaggccc ggacctcggg caccgggatg gggcagcgcg
      121 ttgccgaggt catggatcgt ggcgaactgg tcaccgacga aatcgtgatc ggcctgatcc
      181 gcgagaagct gtccgaggcc ggaaccggct tcatcttcga cggttttccc cggacattgg
      241 cgcaggcaga tgctttgggc gatctgctgg aagaaaccgg catgacgctg gacagcgtga
      301 tcgagatgcg cgttgatgac gaggcgctgg tgcgccggat caccggccgg tttacctgcg
      361 gcaattgtgg cgaggtctat cacgacgaca ccaagccgac gaaagagcct ggaatctgcg
      421 atgtctgcgg atcgaccgat ctcaagcgcc gggccgacga caacgaggaa agcctgaaga
      481 cccggcttct ggaatattac aagaagacct cgccgctgat cggctattat tatgcgaagg
      541 gcaagctgac ccccgtcgac ggcctggccg atatcgatga ggtttcgcgc cagatcgcag
      601 ccgctttcga cgtctgagat cgagccgggc gggatgatcc gcccgtgtca aggcttttcc
      661 ttggcctgcc cttgacgggg cgggcaactg cctttagatc acggcatctc gcaagagaat
      721 cacccggcaa ccgggtggac catagaccgg cccgaaggct tggctttcgg gccttgtgtt
      781 gtgaaaaaag gttccggcgc tacggaatcg caactggaaa aggaaaacgc gtggctcgta
      841 tcgctggcgt caacattccg acggggaagc gtgtccccat cgccctgacc tatatccatg
      901 gcatcggccc gatgtatgcc gaacagatct gcgaagccgt cggcatcgac cgtgcgcgcc
      961 gcgtcaacga tctttctgat gccgaagttc tgcaaatccg cgaatatatc gacggcaacc
     1021 tgacggtcga gggcgatctg cgccgcgagg tgcagatgaa cgtcaagcgc atgatggacc
     1081 tggggtcgta tcgcggtctg cgtcaccgcc gcgggctgcc ggtccgtggc cagcgcaccc
     1141 ataccaatgc ccgcacccgc aagggcccgg cgaagccgat cgccggcaag aagaagtagg
     1201 gggacggaca atggcacgtg acaagacccg catgaagcgc aaggagcgca agaacatcgc
     1261 caccggcgtg gcgcatgtga actccagctt caacaatacc aagatcctga tctcggatgt
     1321 ccagggcaac gcgatcgcgt ggtcttcggc cggcacgatg ggcttcaagg ggtcgcgcaa
     1381 atcaacgccc tacg
//
LOCUS       DTVW01000602            2347 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1726289, whole
            genome shotgun sequence.
ACCESSION   DTVW01000602 DTVW01000000
VERSION     DTVW01000602.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2347)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2347)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2347
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1726289"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..2052
                     /locus_tag="EYO87_07915"
     CDS             <1..2052
                     /locus_tag="EYO87_07915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008279433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase"
                     /protein_id="HIC65907.1"
                     /translation="PRRTATCEIADLHLPIAAGADAALFNRLLAEIDRRGLIAPGPAL
                     DGLDQALLAADRTDAAVTGLATADLARFVNLWCDSEKVVTLFSQGINQSDSGTDKVNA
                     ILNCHLATGRIGRPGMGPFSVTGQPNAMGGREVGGLANMLTCHLEIENAAHRDAVRRF
                     WNAPRMAERPGLKAVDMFRAVEEGRIKALWIMCTNPAVSMPDADRVARAIAGCDFTVV
                     SDIMARTDTTRLADVLLPATGWGEKNGTVTNSERRISRQRPSLAPVGQARDDWRIIAD
                     VARRMGWGDAFGWSHPSEIFAEYAALSGIAGGLGSDFDISDCAGIGRAAYDGMTPFLW
                     PRAGARQGGRFFGDGRYHTFSGRGCMVAVAPRPPQPVTGEFPFRLNTGRVRDHWHSMT
                     RTGLSPSLSRHLAEPFLEIHPRDAAALGLSPASLARVSGAQGDALLRVLVTDRVAAGQ
                     PFAPMHWSAETAASGRINSAIPALVDAVSGQPALKSSPAAIRPFGAVWYGFAISQAPI
                     RPDCEYWAVSALAGGYQAELAGLHEPDDWTAFAKHLFSLTSDPLAVHDRRRGLARLAF
                     AGNGRVQAALFVSGEPVALSRHHVAAALGCDMDANLLAGRPGVHQPDEGAIVCACATV
                     GMNSLVRAITTQGLVTLDAVGKALGAGANCGSCRPEISNLLTRLGDPDLPKPGNGFDA
                     D"
     gene            2132..>2347
                     /locus_tag="EYO87_07920"
     CDS             2132..>2347
                     /locus_tag="EYO87_07920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008282777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HIC65908.1"
                     /translation="MTIRNLRTLIAFADHGTFSAAAEAVFITHAAVSQQMKSLEQEWN
                     VVLFDRSRRTPVLTSVGKALVAKAREIV"
BASE COUNT          392 a          777 c          758 g          420 t
ORIGIN      
        1 ccgcgccgca ccgccacctg cgagatcgcc gatcttcacc tgcccatcgc ggccggggcg
       61 gatgccgccc tgttcaacag gctgctggcc gagatcgaca ggcgcggact gatcgcgccc
      121 ggtccggccc tggacggact ggaccaggcc cttctggccg cagaccggac cgatgccgcc
      181 gtgaccgggc tggcgaccgc ggatctggcc cgtttcgtga acctgtggtg cgacagcgaa
      241 aaggtcgtga cgctgttttc gcaagggatc aatcaatccg acagcggcac cgacaaggtc
      301 aacgcgatcc tgaattgcca tctcgcgacg gggcggatcg gacgaccggg catgggaccg
      361 ttttccgtca cgggtcagcc gaacgccatg ggcgggcgcg aggtcggcgg gctggccaac
      421 atgctgacct gccacctgga gatcgaaaac gccgcccacc gcgacgccgt gcggcgattc
      481 tggaatgcgc cgcgcatggc cgaaaggccg ggactgaagg ccgtggacat gttccgcgcg
      541 gtcgaggagg gacggatcaa ggcgctgtgg atcatgtgca ccaacccggc ggtctcgatg
      601 cccgacgccg accgggtcgc ccgcgccatc gccggctgtg actttaccgt ggtttccgac
      661 atcatggcgc gaaccgacac gacgcggctg gccgatgtcc tgctgccggc gaccggatgg
      721 ggcgaaaaga atggcaccgt caccaattcc gaacgccgca tcagccgcca gcggcccagc
      781 ctcgcgcccg tggggcaggc gcgcgacgac tggcgcatca ttgccgatgt cgcccggcgc
      841 atgggatggg gcgacgcctt cggctggtcc cacccgtcag aaatcttcgc cgaatatgcg
      901 gcgctttcgg ggatcgccgg cggtcttggc agcgatttcg acatttccga ttgcgcgggg
      961 atcggcaggg ccgcctatga cgggatgacg ccgtttctct ggccgcgtgc tggtgcgcgg
     1021 caaggaggcc gctttttcgg tgacggccgc tatcatacct tctcgggtcg cggatgcatg
     1081 gtggccgtcg cgccgcgccc gccgcagccg gtcacgggcg aatttccctt ccgcctcaat
     1141 accggccgtg tgcgcgatca ctggcacagc atgacccgga ccggactttc acccagcctc
     1201 tcgcgtcatc tggccgagcc attcctggaa atccatcctc gcgacgccgc cgcgcttggc
     1261 ttgtcacccg caagtctggc gcgggtcagc ggagcgcagg gagatgcgct gctgcgcgtc
     1321 ctggtcaccg accgcgtcgc tgccgggcaa ccctttgccc cgatgcattg gagcgccgag
     1381 acagcggctt cggggcgcat caacagcgcc atacccgcgc tggtggacgc tgtttcgggc
     1441 cagccggcgc tgaaatcgtc gcccgcagcc attcggccct ttggcgcggt ctggtatggc
     1501 tttgcgatat cccaggcccc gatcaggccc gattgcgaat attgggcggt ctcggccctg
     1561 gctggcggct atcaggcgga actggccggg ctgcacgaac ccgatgactg gaccgccttt
     1621 gcaaagcacc ttttctcttt gacatcagat ccgcttgccg tgcatgaccg gcggcgcggc
     1681 cttgcacgat tggcctttgc cggaaacggc cgcgtgcagg cggcgctttt cgtctctggc
     1741 gagccggttg ccctgtcgcg ccaccatgtc gctgcggctc ttggctgtga catggacgcg
     1801 aacctgttgg ccggccgtcc gggtgtccac cagccggacg agggcgcgat cgtctgcgcc
     1861 tgcgccaccg tcggcatgaa cagcctggta cgcgcgatca cgacgcaagg actggtgacg
     1921 ctggatgcgg tcggcaaggc gcttggcgcc ggcgccaatt gcggttcctg ccgccccgag
     1981 atcagcaacc tgctgacaag gctcggcgat cccgatctgc caaagcccgg aaacgggttc
     2041 gatgccgatt gacaatcaat atcggtaaaa ttatctttat aaaagccaca caaattaaat
     2101 ctattgatag cgcggctttc ataaacgcaa gatgaccatt cgcaacctga gaaccttgat
     2161 cgcctttgcc gatcacggca ccttttcggc tgcggcggaa gccgtcttca ttacccatgc
     2221 cgccgtcagc cagcagatga aatcgctgga acaggaatgg aatgtcgttc tgttcgaccg
     2281 ttcccgccgg acacctgtgc tgacatcggt cggcaaggcg cttgtcgcaa aggcgcgcga
     2341 gatcgtc
//
LOCUS       DTVW01000603            3875 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1728639, whole
            genome shotgun sequence.
ACCESSION   DTVW01000603 DTVW01000000
VERSION     DTVW01000603.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3875)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3875)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3875
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1728639"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..542)
                     /locus_tag="EYO87_07925"
     CDS             complement(<1..542)
                     /locus_tag="EYO87_07925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HIC65909.1"
                     /translation="MSHPSQQDSRRALSLSTLAFTICFAVWTIFSIIGIQISQQLGLS
                     ETQFGLLVGLPILTGSLSRIVLGVATDRLGGRLVYTLNMLSAALATLLLSWATTYPQM
                     LLAALGVGLAGGSFAVGVAYVSRFYRDAQQGTALGIFGVGNVGAAVTKFVAPFVMVAV
                     GWQATAQIWALALAVTAVLF"
     gene            complement(841..2022)
                     /locus_tag="EYO87_07930"
     CDS             complement(841..2022)
                     /locus_tag="EYO87_07930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018001438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HIC65910.1"
                     /translation="MIALRLGYLPLVDAAPLIVARELGFAAEEGLQLDLIRLGAWAQG
                     RDMLGAGLIDAAHMLVPMPIGQALGLGPRLPDLDLVMFLSHGGQAVGVSTAIETRLRA
                     AGHGFDFSDAGAAGRALRGAITGPLRVGVPFMFSTQLELIRHWLGASGFSEDDLHLKT
                     VPPPMMADALAAAEIDAFCVGEPWASFAVERGIAALLLPGTAIWTSPPEKGLVLRRDF
                     AETRPGQTGALMRAIWRAGRWLDEPDHRGTAAEIVSRAEYLDLPSELVERGLTGRLLV
                     SPAGEARAVPRLLAFNAGAASFPWKSLAALIARNIALRHDLPPEGAMQRAMGHFRTDL
                     YRRHLRPAGASLPGASLRLEGMIGEDRTVAAERGQMILRADSFFDGFVFEPPIPDSSI
                     N"
     gene            complement(2019..2606)
                     /locus_tag="EYO87_07935"
     CDS             complement(2019..2606)
                     /locus_tag="EYO87_07935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018001437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ANTAR domain-containing protein"
                     /protein_id="HIC65911.1"
                     /translation="MLKKLLIVVVESDPDRARAIADGLGDVGDHDIRILAEHSALARR
                     VAELSPDVVLIDIANPSRDMLEELALASGPAERPVAMFVDRSDEQLTRSAIEAGMSAY
                     VVDGLRPDRLKPIIDAAVARFHILRQLRAELAATRAALEDRKIVDRAKAVLMKARGID
                     EAEAYALLRKTAMDQGKRIGEIAQQLVTAAGLLGR"
     gene            complement(2784..3662)
                     /locus_tag="EYO87_07940"
     CDS             complement(2784..3662)
                     /locus_tag="EYO87_07940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010405493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HIC65912.1"
                     /translation="MEDCIIIGGGPAGLTAALYLARFLRRVTVFDAGAGRARMIPKTH
                     NLGPFPDGISGKELLDRMRAHAELYGARIENATVEAVQKQGDLFRVTADRRTETARFV
                     IFASGVVNHRPPLSASDHDRGVAQGLIRYCPVCDAYEIRDKRVAVLGNGAHGLAEARF
                     VRDYSPTVTLIPPEGIPARARDGIGALDAPMKGLALTDSQVVVTLEDGQTHHFDTLYV
                     ALGTSAHSELAGSLGVGLGDAGCIIGDAKLKTSIDGVYAIGDITDGLDQIAHAMGQAA
                     VAATAIHNTLPGTPRE"
BASE COUNT          694 a         1337 c         1257 g          587 t
ORIGIN      
        1 cagaacagca cggccgtcac ggccagcgcg agggcccaga tctgcgccgt ggcctgccag
       61 ccgacggcga ccatcacgaa gggcgcaacg aatttggtca ccgccgcgcc gacattgccg
      121 acgccgaaaa tgccaagcgc ggtgccctgc tgcgcatcgc gatagaagcg ggacacatag
      181 gccacgccga ccgcgaagga cccgcccgca agacccacgc caagcgcggc cagcagcatt
      241 tgcggatagg tcgtggccca tgacagcagc agcgtcgcca gtgcggcgct cagcatgttc
      301 agcgtataga ccagacgccc gcccagtcgg tcggtggcaa cgcccagaac gatccggctc
      361 agcgagccgg tcaggatcgg cagccccacc agcaggccga actgcgtctc ggacaggcca
      421 agctgctggc tgatctggat gccgatgatc gagaagatcg tccagacggc gaaacagatg
      481 gtgaaggcaa gggtggacag gctcagcgcg cggcgtgaat cctgctgcga aggatgggac
      541 atgagatgct ccgatggctg gcgtgggacg gatcgcgcag acatccatcg tggctcccag
      601 agggaggtcc gcggcggaac gcgcaatcag gctgtcaggg gaaccgcgtc ctcgcggaaa
      661 tcgtgcgcaa cgttgcgaac gggcctgtgg cgcgccattg cgtcctggcc atgtcctgca
      721 tcttcacgct tgtccggcgg cagggcaagc ggaacaccgc gatcgcgacc gatgccaccg
      781 gggaaaaccg cgcggcgcat caagtttttg cggcggatgc ggtgattgcc tgaaaagtgg
      841 tcagtttatg gatgaatccg ggatcggcgg ctcgaacacg aagccgtcga agaagctgtc
      901 ggcgcgcagg atcatctggc cacgctcggc cgcgacggtg cgatcttcac cgatcatccc
      961 ctccagtcgc agcgacgcgc cgggcaggga cgcgcctgcc ggtctcaggt gccggcgata
     1021 aagatcggtg cggaaatgcc ccatcgcgcg ctgcatcgcg ccctcgggcg gcaaatcgtg
     1081 gcgcagtgcg atattgcgcg cgatcagcgc ggccaggctt ttccagggaa agctggccgc
     1141 tccggcattg aacgccagca ggcgcgggac cgcgcgcgcc tcgccggccg gggaaaccag
     1201 cagccggccg gtcagcccgc gttcaacaag ttcggacggc agatccagat attcggcgcg
     1261 cgacacgatc tcggcggcgg tgccgcgatg gtcgggttca tccagccagc gccccgcccg
     1321 ccagatcgca cgcatcagcg cgccggtctg cccgggccgg gtttcggcga agtcacgccg
     1381 caggaccaat cccttttcgg gcggcgaggt ccagatcgcc gtgcccggca gcagcagcgc
     1441 ggcgatgccg cgttcgaccg caaacgaggc ccagggttcg cccacgcaga aggcgtcgat
     1501 ttcggccgcc gccagcgcat cggccatcat cggcggcggc acggtcttga gatgcagatc
     1561 atcttcgctg aaccccgaag cgccgagcca gtggcggatc agttcaagct gggtcgagaa
     1621 catgaacggc acccccaccc gcagcggccc ggtgatcgcg ccgcgcaagg cccggcccgc
     1681 cgccccggcg tcggagaagt caaagccgtg acctgccgcg cgcagccggg tctcgatcgc
     1741 ggtgctgacc cccaccgcct ggccgccatg cgacagaaac atcaccagat cgaggtcggg
     1801 caggcgcggc cccagcccaa gcgcctgacc gatcggcatc gggaccagca tatgggccgc
     1861 gtcgatcagc cccgcgccca gcatgtcgcg gccctgcgcc caggccccca gccggatcag
     1921 atccagttgc agcccttctt cggcagcaaa acccagctcg cgcgcgacaa tcagcggcgc
     1981 cgcgtcaacc aggggaagat agcctagccg cagcgcgatc atcgccccag caatcccgcc
     2041 gccgtcacca gttgctgcgc gatttcgccg atgcgcttgc cctgatccat cgccgtcttg
     2101 cgcagcagcg cataggcctc ggcctcgtcg atgccgcgcg ccttcatcag cacggccttg
     2161 gcacgatcca cgatcttgcg gtcttccagc gcggcacggg tggcggccag ttcggcccgc
     2221 aattgccgca ggatatgaaa gcgcgcgacg gcggcgtcga tgatcggctt caggcggtcc
     2281 gggcgcagcc cgtccaccac ataggccgac atccccgcct cgatagccga tcgcgtcaat
     2341 tgttcgtccg aacgatccac gaacatcgcc accggccgtt cggccggacc agaggccagc
     2401 gcaagttcct cgagcatgtc gcgcgacgga ttggcgatgt cgatcaggac cacgtccggg
     2461 ctcagttcgg ccacgcgccg ggccagcgcc gaatgctcgg ccaggatgcg gatatcgtga
     2521 tcgccgacgt cgcccagccc gtccgcgatc gcccgcgccc ggtcgggatc cgattcaacg
     2581 acgacgatga gaagtttttt cagcatggcg acccgatcac gcttctcgcg ttggcacagg
     2641 cagccctgcg acgcaaggat gtccggcacc cgtgaccatg cctttcgccc cgatgcacct
     2701 tgtttgccca gatctgcctg ccgaatgcgg ggcgcatcgg caccgggacg gacgacctgc
     2761 gatccgtcgc catgggcagg tcattattcg cgtggggttc ccggcagcgt attgtggatc
     2821 gcggtcgcgg ccacggcggc ctgacccatc gcatgggcga tctgatccag cccgtcggtg
     2881 atatcaccga tggcatagac tccgtcgatg ctggttttca gttttgcatc gccgatgatg
     2941 cagcccgcat caccaagtcc gacgcccagc gaaccggcca gttccgaatg cgcggaggtg
     3001 cccagggcga catagagcgt gtcgaaatgg tgcgtctggc cgtcttccag cgtcacgacg
     3061 acctgcgaat ccgtcagagc cagacctttc atcggcgcgt ccagggcgcc gatcccgtcc
     3121 cttgcgcgcg ccggaatccc ctcgggcggg atcagcgtca ccgtcgggga atagtcgcga
     3181 acgaagcgcg cctcggccag gccatgcgcg ccattcccca ggacggcaac acgcttgtcg
     3241 cgaatttcat aggcatcgca gaccgggcaa taacggatca gcccctgcgc gacgccccga
     3301 tcgtggtcgc tggccgacag cggcggccga tggttgacga ccccggacgc gaaaatgacg
     3361 aagcgcgcgg tttcggtccg gcggtcggcc gtgacccgga acaggtcgcc ctgtttctgg
     3421 accgcctcga ccgtcgcgtt ttcgatcctg gcaccgtaaa gttcggcatg cgcgcgcatc
     3481 cggtcaagaa gctccttccc ggaaatgccg tccggaaagg gtccgagatt atgggttttc
     3541 gggatcatcc gcgcccgccc cgctccggcg tcgaaaaccg tgacgcggcg caggaaccgg
     3601 gcaagataga gcgccgcggt cagtcccgcc gggcctccgc cgatgatgat gcagtcttcc
     3661 atgtccggcc tcttgttctg tcacgccatt cctatagcca aacaccggcc gggcaagcga
     3721 agctatcgtg atcgtcacgg ccaagggggc cgcgacgcgg ggccgaaccc gaatggcgtt
     3781 tcagacacct gcccccagtc ccggctcagc gaacggcaga gcggcgcgcg ggatgatccc
     3841 gcgtatcttc ggtggtcctt ccgcctgtcg cgatg
//
LOCUS       DTVW01000604            2818 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1728695, whole
            genome shotgun sequence.
ACCESSION   DTVW01000604 DTVW01000000
VERSION     DTVW01000604.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2818)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2818)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2818
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1728695"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..280)
                     /locus_tag="EYO87_07945"
     CDS             complement(<1..280)
                     /locus_tag="EYO87_07945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010391882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutL"
                     /protein_id="HIC65913.1"
                     /translation="MNSHAPNIRPVIRQLDEATSNRIAAGEVVERPASAVKELVENAL
                     DAGATRIDIAIENGGKRLIRVTDDGCGMTADDLPLALSRHATSKIDGSD"
     gene            complement(635..1999)
                     /locus_tag="EYO87_07950"
     CDS             complement(635..1999)
                     /locus_tag="EYO87_07950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007118771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HIC65914.1"
                     /translation="MRAVIALVATLIALPAWAIEIQKVTSPGGIEAWLVEDRSIPFVA
                     LEFDFRGGTSLDAPGKRGAINLMTATLEEGAGKLDSTAFARAVEDLGADISFDSNQDA
                     LSIDMRTLTENRDATADLLAKALTQPRFDQDAIDRVKGQVQAIIRANANDPQSIASEK
                     LAQLAFGDHPYGSSANGTAESVARLTRKDLVAAKNRVLARDRVVVGVSGDITPEELGP
                     LLDRILGGLPEKGTAPLPEPAQLNLGNDVTVIDWDSPQTVVSFYGPGLPIDDPDYFAA
                     YVANHILGGGGFGSRLMEELREKRGLTYGIYTGLATGLYGQRWLGGMQGSNASIGQAL
                     DLIRKEWEKMAKDGVSQQELRDAKTYLTGEYPLRFDGNGKIAGILAGMQLVGFPIDYV
                     NTRNQKVEAVTAEDVQRVAARLLNPDQLRFVLVGRPEGVETAKAGTGSPPAGQAAETE
                     NAVN"
     gene            complement(1999..>2818)
                     /locus_tag="EYO87_07955"
     CDS             complement(1999..>2818)
                     /locus_tag="EYO87_07955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HIC65915.1"
                     /translation="SPSEAVLILAGDVTPEKARELAKKYYGPIPAKAEAAPRIRPQEP
                     TQRSPRRMEMVDPRVPQPVMTRMILAPERNPGDQARAAALTVLAELLGGSMQTSVLGR
                     ELALKGKAIWAGASYDGLAVDPTNFTISMMPAQGLSRDKAEAALDKVLADFLKTGPDK
                     ADLERVKTSIRAARIYARDSAQGRAYDYGQGLATGLSIEDVNDWPDILSAVTAQDVMA
                     AAQEVLTSDARVTGWLLPAPPAETAANSSAAAVPGDAAAPPAAATAETQKEIEG"
BASE COUNT          445 a          917 c          933 g          523 t
ORIGIN      
        1 ggtcactgcc atcgatcttg ctggtggcgt ggcgcgacag ggccaacggc aggtcgtcgg
       61 cggtcatccc gcagccgtca tcggtgacgc ggatcagccg cttgcctccg ttctcgatgg
      121 cgatgtcgat gcgcgtcgcg ccggcatcca gcgcgttttc caccagttcc ttcaccgccg
      181 aagccggacg ctcgaccact tcgcctgctg cgatgcggtt ggacgtggcc tcatccagtt
      241 ggcggatgac agggcggata ttgggtgcgt gactgttcat gtcaccagat atagcatctg
      301 gccgcggggt cggaaagaat ttcctgcctg atgggtgacg gaacggaaac cggggcgctg
      361 gtttggcggt tgaggcaaca cagcttttca aaaaaggacg aaacaatgcg taaggtaagt
      421 gtggcaatga cattgggcct gacgctgctg gtagcggcct gcggcccgaa taccgcaacc
      481 cgcgcgacga ccggcgcggc aacgggcgcc gtcgtcggcg ggccggtcgg cgccgtggcg
      541 ggcgcggcgc ttggcggcag cggcgcagtc caggtcaagt gatccggccg aactgtgggt
      601 gaacatggcc gggatcgctc ccggccaagt tccctcaatt gactgcgttc tccgtctcgg
      661 ccgcctgccc ggcgggcggc gacccggtcc cggctttcgc ggtttcgacc ccctccggac
      721 ggccgactag gacaaagcgc aactggtccg ggttcagcag acgcgcagcg acgcgctgga
      781 catcctcggc ggtgacggcc tcgaccttct ggttgcgggt gtttacgtag tcgatgggaa
      841 agcccacaag ctgcatcccg gccaggatcc ccgcgatctt gccattgccg tcgaaacgca
      901 gcggatattc cccggtcaga taggtcttcg catcccgcaa ttcctgctgg ctgacgccat
      961 ccttggccat cttttcccat tccttgcgga tcaggtccag agcctggccg atcgaggcgt
     1021 tcgaaccctg catcccgcca agccagcgtt gaccataaag tccggtcgcg agccccgtat
     1081 agatgccata ggtcaagccc cgcttttcgc gaagttcttc catcagacga gaaccgaagc
     1141 cgccgccgcc aagaatgtgg ttggcgacat aggcggcgaa gtagtccggg tcgtcgatgg
     1201 gcaggcccgg cccatagaag ctgaccacgg tctgcgggct gtcccagtcg atcacggtca
     1261 cgtcgttgcc gaggttcaat tgcgcaggtt cgggcagggg ggcggtgcct ttttccggaa
     1321 gaccgcccag gatccggtcc agcagcggtc ccagttcctc gggcgtgata tcgcccgaga
     1381 cgccaaccac cacccggtcc cgcgccagaa cgcggttctt cgcggcgacc agatccttcc
     1441 gcgtcagccg cgccacggat tcagccgtgc cattggccga actgccatag gggtgatcgc
     1501 caaaggccag ttgcgccagt ttctcgctgg caatggattg cggatcgttt gcgttcgcgc
     1561 ggatgatcgc ctgaacctga cccttcaccc ggtcgatcgc atcctgatcg aaacgcggtt
     1621 gggtcagcgc cttggccagc agatccgcgg tcgcgtcgcg attctcggtc agggtgcgca
     1681 tgtcgatgct cagcgcgtcc tgattgctgt cgaaagagat gtcggccccc agatcctcga
     1741 ccgcccgtgc aaaggcggtc gaatccagct tgcccgcgcc ttcctccagc gtggcggtca
     1801 tcaggttgat cgcaccacgc ttgcccggcg catcgagact ggtgccaccc ctgaagtcga
     1861 attccagcgc gacgaagggg atcgagcgat cctcgaccag ccacgcctcg atgccgccgg
     1921 gcgacgtgac cttctggatc tcgatggccc aggccggcag cgcgatcagg gtggcgacga
     1981 gggcgatgac ggcgcggatc atccttcgat ctccttttgc gtttcggcag tggcggcggc
     2041 gggcggcgcg gccgcgtcgc ctggaacggc tgcggcgctg gaattggctg ccgtctcggc
     2101 cggcggtgcg ggcagcagcc agccggtgac gcgggcgtcg ctggtcagca cctcctgcgc
     2161 ggccgccatc acgtcctggg cggtaaccgc cgagaggatg tcgggccagt cgttgacatc
     2221 ctcgatgctc agcccggtgg ccagaccctg cccgtaatca taggcccggc cctgggcgga
     2281 atcgcgggca tagatgcggg cggcgcggat gctggtcttg acccgttcca gatcggcctt
     2341 gtccggaccg gtcttgagga aatcggccag caccttgtcc agtgcggcct cggccttgtc
     2401 gcgggacaat ccttgcgcgg gcatcatcga gatggtgaaa ttcgtcggat cgaccgccag
     2461 tccgtcatag ctggccccgg cccagatcgc cttgcccttc agcgccaatt cgcgccccag
     2521 aaccgaggtc tgcatcgatc cgcccagcaa ttcggccagc accgtcagcg cggcggccct
     2581 ggcctggtcg cccggattcc gctcgggcgc caggatcatg cgggtcatga ccggctgggg
     2641 aacgcgggga tcgaccatct ccatcctgcg cgggctgcgc tgcgtgggtt cctgcgggcg
     2701 gatacggggt gcggcctctg ccttggcagg aatggggccg taatattttt tcgccagctc
     2761 gcgggccttt tctggggtga cgtcgccggc aaggatcagc accgcctcgc ttggggaa
//
LOCUS       DTVW01000605            3481 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1731044, whole
            genome shotgun sequence.
ACCESSION   DTVW01000605 DTVW01000000
VERSION     DTVW01000605.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3481)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3481)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3481
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1731044"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..585
                     /locus_tag="EYO87_07960"
     CDS             <1..585
                     /locus_tag="EYO87_07960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007426270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MoxR family ATPase"
                     /protein_id="HIC65916.1"
                     /translation="SIGRTTYDLSEPFFTIATQNPIEQEGTYPLPEAQLDRFLLQIDV
                     DYPDRDTERGILLATTGIAEGAAHAAFDAQGLIAAQRLIRQMPVGEAVVEAILDLVRA
                     FRPGADEAAPFVADTLVWGPGPRAAQALMLVTRARAVLNGRFAPTLEDVEAMAPPVLR
                     HRMALSFAARARGETTDAVIARLLDQRFGSRQAA"
     gene            593..1462
                     /locus_tag="EYO87_07965"
     CDS             593..1462
                     /locus_tag="EYO87_07965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010395803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF58 domain-containing protein"
                     /protein_id="HIC65917.1"
                     /translation="MTRSPAELRSRAEQAGAHLPGLILSAERLAAMVAPGAHGLRRAG
                     PGEDFWQYRPASSGDTARSIDWRRSARSDSQFVRDREAQTAQAVGLWVSAGQGMGYSG
                     AVDRPTKGYRAQVMALALAMILLRGGEKVGMLGQPARAGRVQAERLAEAMAITQTARD
                     DADAPAPESLRPAQRLVILSDFLTDPDWVRALLARASGIGVRGVLMQVLDPDEENFPY
                     SGAVVFRSLSGATRHDSRDAGGLREAYLARLAQRRDWLREQARGAGWHFGHHATGHAP
                     AHALSWLYQVLGG"
     gene            1462..>3481
                     /locus_tag="EYO87_07970"
     CDS             1462..>3481
                     /locus_tag="EYO87_07970"
                     /inference="COORDINATES: protein motif:HMM:TIGR02226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LytTR family transcriptional regulator"
                     /protein_id="HIC65918.1"
                     /translation="MLILGPLGFAAPWVLGALVALPVLWLILRAMPPAPRLVAFPGVA
                     LLRGLIDRSPVAQRTPWWLLLIRLAAVAALILAFAGPVWKPVLRSDADGPLLVVMDAG
                     WAAAPGWAGRQARAERALTEAAGQGRPAALLLADGRAGSGALVFAPADRLLAGLRASG
                     PVSWDTALPDDPDVALADVPGGLLSTLWISDGLDHPNRAAWLAALADRGPVTVVPPTR
                     ALTALGLGGGDRPALTLYARGDAAPQILAIGPDPQGIERELARLTPGDVTRSEGVLTR
                     PVAIDLPPELRNRVTRFQIEGESHAGAVVLADDRVRRRKVGLVGDAADQAEGQRLLSP
                     LYYLRRALAPTTDLVEGGLGDVLDAAPDVIIVADQVEMAESGELAQWVDAGGLLIRFA
                     GPRMAAYDGLVDEPLLPVTLRQGGRDIGGALSWGDPRGLAPFATDGIFAGLTAPGDVT
                     VRAQLMAQPAPDLSDRTIAALSDETPLVTRARVGQGQIVLFHVTANAEWSSLPLSGLF
                     VEMLNRLVATARVSPAEEQAEDREQAFWTPQIVLDGFGRAAPAEDLSPIAAGDMAGGP
                     APGRPAGIYAAGDRSRALNAGGDFTLATWPGATVEAAAELPGRDLKGWLLAAAALLLA
                     LDAIGSAFVARGTRARAMPAAAILLAVLLALPGGQARAQQDQPDPDLVR"
BASE COUNT          412 a         1228 c         1307 g          534 t
ORIGIN      
        1 agcatcggcc gcactaccta cgatttgagc gagccgtttt tcacgatcgc cacgcaaaat
       61 ccgatcgaac aagagggcac ctatccactg cccgaggcgc aactggaccg cttcctgctg
      121 cagatcgacg tcgattatcc cgaccgcgac accgaacgcg gcatcctgct ggcgacgacc
      181 ggcattgccg agggcgcggc ccatgcggca ttcgacgcgc aggggctgat cgccgcgcaa
      241 cgcctgatcc ggcagatgcc ggtgggcgag gccgtggtgg aagcgatcct cgatctggtg
      301 cgcgccttcc gacccggtgc cgacgaggcc gcgcccttcg tggccgacac cctggtctgg
      361 ggccccggtc ccagggccgc gcaggcgctg atgctggtca cgcgggcgcg cgcagttctg
      421 aacggccggt tcgcgcccac gctggaggat gtcgaggcga tggccccgcc ggttctgcgg
      481 catcggatgg cgctgtcctt cgctgcccgc gcgcgtggcg agaccaccga cgcggtgatc
      541 gcccgcctgc tggatcagcg tttcggcagc cgtcaggcgg catgaggcgg tcttgacgcg
      601 cagtcccgcc gaacttcgat cccgcgccga gcaagccggc gcccatctgc ccggcctgat
      661 cctgtcggcc gagcggctgg ccgcgatggt cgcgccgggc gcgcatggcc tgcgccgggc
      721 cggtccgggc gaggatttct ggcaataccg cccggccagc agcggcgata ctgcacgcag
      781 catcgactgg cggcgctcgg cccgttcgga ttcgcaattc gtgcgcgacc gcgaggcgca
      841 gacggcgcag gcggtcgggc tgtgggtctc ggcggggcag gggatgggct attccggcgc
      901 ggtcgatcgg ccgaccaagg gataccgcgc ccaggtaatg gcgcttgcgc tggcgatgat
      961 cctgctgcgc gggggcgaga aggtcgggat gctgggccag ccggcgcgcg ccggccgcgt
     1021 tcaggccgaa cgactggccg aggcgatggc catcacgcag accgcccgcg acgacgccga
     1081 cgcgcctgcg cccgaaagcc tgcgccccgc gcagcggctg gtgatcctgt cggatttcct
     1141 gaccgatccg gactgggtcc gtgcgctgct ggcacgcgca tccgggatcg gcgtgcgcgg
     1201 cgttctgatg caggttctgg acccggacga ggagaacttt ccctattccg gtgcagtggt
     1261 cttccggtcc ctgtcgggcg cgacgcgcca tgacagccgc gacgcgggtg ggctgcgcga
     1321 ggcctatctg gcgcggctgg cccagcggcg cgactggttg cgcgaacagg cccggggcgc
     1381 gggctggcat ttcggccatc acgcgaccgg ccacgccccg gcccacgcgc tgagctggct
     1441 ctatcaggtt ctggggggct gatgctgatc ctcgggccct tgggattcgc ggcgccatgg
     1501 gtgctgggcg cgctggtcgc gctgccggtc ctgtggctga tcctgcgcgc gatgccaccg
     1561 gcgccgcgtc tggtggcctt tcccggcgtg gcgctgctgc gcgggctgat cgaccgctcg
     1621 cccgtggcgc agcggacgcc gtggtggctg ctgctgatcc ggcttgcggc ggtcgcggcg
     1681 ctgatcctgg ccttcgccgg gccggtctgg aagccggtgc tgcgcagcga tgcggatggc
     1741 ccgctgctgg tggtgatgga tgcaggctgg gccgccgcgc cgggctgggc cggccggcag
     1801 gcccgcgccg aacgggccct gaccgaagcc gccggccagg gccgccccgc cgcgctgctg
     1861 ctggcggatg gccgggccgg ttccggtgcc ctggtcttcg cccccgccga ccggctcctg
     1921 gccggtctgc gcgcgtccgg gcctgtttcc tgggacacgg cgctgcccga cgatcctgac
     1981 gtggcgctgg cggatgtgcc gggcgggctg ctttcgacgc tgtggatcag cgacgggctg
     2041 gaccatccga accgcgccgc ctggctggcc gccctggccg atcgcgggcc ggtaacggtg
     2101 gtgccgccga cgcgcgcgct gaccgcgctt ggccttggcg gcggcgatcg gcccgccctg
     2161 acgctttacg ccaggggcga tgccgcgccc cagatcctgg ccatcgggcc cgatccgcag
     2221 gggatcgagc gcgagctggc ccgactgacc cctggcgatg tcacgcgctc cgagggcgtt
     2281 ctgacccgcc ccgtcgccat cgatctgccg ccggaattgc gcaaccgcgt gacccggttc
     2341 cagatcgaag gcgaaagcca tgccggcgcg gtcgtcctgg ccgatgaccg ggttcggcgc
     2401 cgcaaggtcg ggctggtggg cgacgccgcc gatcaggccg aggggcagcg gcttctgtcg
     2461 ccgctgtatt acctgcgccg ggcgctggcg ccgacgaccg atctggtcga gggggggctg
     2521 ggcgatgtgc tggacgccgc ccccgatgtg atcatcgtcg ccgatcaggt cgagatggcc
     2581 gaatccggag aactggcgca atgggtcgat gcgggcggct tgctgatccg ctttgccggg
     2641 ccgcgcatgg ccgcctatga tggtctggtg gacgaaccgc tgctgccggt caccctgcgg
     2701 cagggcggcc gcgatatcgg cggcgcgctg agttggggcg acccgcgcgg gttggccccc
     2761 ttcgccaccg atggcatctt cgccggcctg accgcgcccg gtgacgtgac ggtgcgggcg
     2821 cagttgatgg cgcagcccgc gccggacctg tccgaccgca ccatcgccgc cctgtcggac
     2881 gagacgccgc tggtcacgcg cgcgcgtgtc gggcagggcc agatcgtcct gttccatgtc
     2941 accgcaaacg ccgaatggtc cagcctgccg ctgtcggggc tgttcgtcga gatgctgaac
     3001 cggctggtcg ccactgcccg cgtcagcccg gccgaggaac aggccgagga tcgcgaacaa
     3061 gccttctgga cgccgcagat cgtgcttgac ggcttcggcc gcgccgcgcc cgccgaggat
     3121 ctgtcgccca tcgccgccgg cgacatggcc gggggaccgg cgcccggccg cccggccggc
     3181 atctacgcgg ccggcgatcg cagcagggcg ctgaacgcgg gtggcgactt cacccttgcc
     3241 acatggcccg gtgccacggt cgaggccgcg gccgaactgc cgggacggga tctgaagggc
     3301 tggctgctgg cggccgccgc gctgctgctg gctctggacg cgatcggttc ggccttcgtt
     3361 gcgcgcggca cgcgcgcgcg cgccatgccg gcggcggcga tccttctggc agtgcttctg
     3421 gcgctgcccg gcgggcaggc gcgggcacag caggaccagc ctgaccccga tctggttcgc
     3481 g
//
LOCUS       DTVW01000606            2034 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1731110, whole
            genome shotgun sequence.
ACCESSION   DTVW01000606 DTVW01000000
VERSION     DTVW01000606.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2034)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2034)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2034
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1731110"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..914)
                     /locus_tag="EYO87_07975"
     CDS             complement(<1..914)
                     /locus_tag="EYO87_07975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009819966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylcrotonoyl-CoA carboxylase"
                     /protein_id="HIC65919.1"
                     /translation="MARLETAVLTASETYTRNHAAQSERVETLRARIAEATAGGRPDM
                     VARHRKRSKLLVRERIDLLVDTGTAFLELSSLAAYGQYGGEVPGAGIVTGIGIVHGLP
                     CVVIANDATVKGGSFYHETVQKHIRAQEIAAENRLPCLYLVDCGGAYLPEQDRVFPDA
                     RHFGNSFYRQTNMSASGLPQISAVFGGCTAGGAYIPALSDEVIMVRGNARIHLGGPSI
                     VKVAINEEVDGETLGGAEMHSRVSGVSDHLAEDEYHALALMRDIVSELGLSRPMGPDA
                     TCAPPARNPEELLGVISADRKQPYDMREV"
     gene            complement(919..1548)
                     /locus_tag="EYO87_07980"
     CDS             complement(919..1548)
                     /locus_tag="EYO87_07980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009803481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HIC65920.1"
                     /translation="MAQSTASKVNETSRSAVGRDGVLDIAARLFREQGYGSVSLRKIA
                     EAAGIKAGSIYYHFGSKDEIVAAVLDAGIRVVHASMRDAITDLPADTDGETILRSAIR
                     AHLRALLDVSDYTSANVRIFGQVPQSVRDANLPTRRAYEAEWDSLLSQLKKDGTLKQD
                     VDIRRLRLMLIGTLNATLDWFDPDRGSADALSRTYADVFLNGILQRQDT"
     gene            complement(1729..>2034)
                     /locus_tag="EYO87_07985"
     CDS             complement(1729..>2034)
                     /locus_tag="EYO87_07985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009803484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HIC65921.1"
                     /translation="VTRTMAKEWGRYKVNVNAVAFGPIRTRLTEGSADGNSTIKVDEK
                     EIKVGVNPDLLSQMERMIPLGRVGTPEEAAGAVYLFCAPESNFISGQHVICGGGFVI"
BASE COUNT          391 a          632 c          602 g          409 t
ORIGIN      
        1 acctcgcgca tgtcataggg ctgtttgcga tcggcgctga tgacgccaag cagttcctct
       61 gggttgcgcg ccggcggcgc gcaggttgca tcgggaccca tcgggcgcga caggcccagt
      121 tcggatacga tgtcgcgcat cagagcaagc gcatgatact cgtcctcggc cagatggtca
      181 gacacaccgg agacgcgcga atgcatctcg gcccccccca atgtttctcc atcaacctct
      241 tcgttgatcg ccaccttgac gatcgagggg ccgcccagat ggatgcgtgc gttgccgcgt
      301 accatgatga cttcgtccga cagggccggg atataggccc caccggccgt gcagcctcca
      361 aagaccgccg agatctgcgg caggccgctc gcggacatgt tggtttgacg ataaaaggaa
      421 ttgccgaaat ggcgggcatc ggggaaaacc cggtcctgct ctggcagata ggcaccgccg
      481 caatccacca gatagaggca gggcagccgg ttctcggctg cgatttcctg ggcgcggatg
      541 tgtttctgca cggtttcgtg atagaaagac ccacccttca ctgtcgcatc gttggcgatc
      601 acaacgcagg gaagcccgtg gacgatcccg ataccggtca cgattcccgc accgggcacc
      661 tcgcccccgt attgaccgta ggcggcaagc gacgacagct caagaaacgc agtgcccgta
      721 tccaccagca ggtcgatccg ttcgcgaacc agcagcttgc tgcgcttgcg atgccgcgcg
      781 accatgtcgg ggcggccgcc agccgttgct tcggcgatcc gcgcgcgcag cgtttcgacg
      841 cgctcgcttt gtgcggcgtg gttgcgggtg taggtctctg atgcggtcag caccgctgtt
      901 tcaagacgtg ccatgaagtc aggtatcctg tctttggagt atcccgttga ggaacacatc
      961 ggcataggtg cgtgacaacg catcggcgct accgcggtcc gggtcgaacc aatcgagcgt
     1021 ggcgttcaat gtaccgatca gcatcaggcg caggcgacgg atatcgacgt cttgcttcag
     1081 cgtgccatct ttcttaagct gggacagaag actgtcccac tctgcctcat aggccctgcg
     1141 cgtgggcaag ttggcatccc ggacggattg cggcacctgc ccgaaaatac gcacattcgc
     1201 cgatgtataa tcgctcacat caagaagcgc gcgcaaatgc gcccggatcg cagagcgcag
     1261 gatcgtttcg ccatcggtat cggctggcag gtcggtgatg gcgtctctca tactcgcgtg
     1321 aacgacccga atccctgcat caagaacggc cgcgacgatc tcgtccttgg aaccgaaatg
     1381 atagtatatg ctacccgcct tgatcccggc ggcctcggca atttttcgga gcgaaacgga
     1441 cccgtagcct tgttcgcgga aaagccgcgc ggcaatgtcc agcaccccgt cccgtccgac
     1501 cgcgctgcgc gatgtctcgt tgactttgct tgcagtgctt tgtgccatag accttcgttt
     1561 cgcctcagcg cctaactaac gcctgttagg tcaatagcgc aagtgagtca atcgtcttaa
     1621 tcgtgcccga ttggagtttg cgggaaattc cgcatgggcg accgccaaga ggccgcccag
     1681 acaacaatgt gcttgcccgg accccgttat cggctccggg caaatgcttt agatcacgaa
     1741 accgccgcca catatgacgt gctgccccga aatgaagttc gattccggcg cacagaacag
     1801 atagacggca ccggcagctt cttccggagt gccgacccgg cccagcggga tcatgcgctc
     1861 catctgggac aggagatcgg gattcacgcc gaccttgatc tctttttcgt cgaccttgat
     1921 tgtgctgttg ccatcagcgc taccttcagt caggcgggtg cggatcgggc cgaaggcgac
     1981 ggcgttgacg ttgaccttat agcggcccca ttccttggcc atcgtccggg tgac
//
LOCUS       DTVW01000607            1022 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1733631, whole
            genome shotgun sequence.
ACCESSION   DTVW01000607 DTVW01000000
VERSION     DTVW01000607.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1022)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1022)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1022
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1733631"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            25..366
                     /locus_tag="EYO87_07990"
     CDS             25..366
                     /locus_tag="EYO87_07990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009803697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65922.1"
                     /translation="MVTEARFRELVESGYSAEILCQESAHKKGPSYYGVWIMRVVSDE
                     GVEKLLVTARTRTTYNDIKIREFKTISGVVSFFIGLGFAHVDLPLEAGTSRTHKLAPS
                     DKDPSDKGAGN"
     gene            410..>1022
                     /locus_tag="EYO87_07995"
     CDS             410..>1022
                     /locus_tag="EYO87_07995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008327370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HIC65923.1"
                     /translation="MVLVMESDGSLTPSRSQNSFARNYNDGIGQGSAYDGIAIFGELE
                     AEQEGVQVAALARPAPLPRADVLSGIQTTALRYAGHPGLRRADLSVRDWLTLYRANVE
                     IESAYRQDAVSSAGALGLGQLMPATARDLGVDPHDPLQNLDGSARYLAMMLEMFGDAR
                     LALAAYNAGPDAVRQYGGIPPYRETQTHVARVMAVVARLEGSDS"
BASE COUNT          193 a          331 c          306 g          192 t
ORIGIN      
        1 aactgggaca tcgaagcacc aaatgtggtt acggaagcca ggttccgcga actcgtggaa
       61 agcggctata gcgctgaaat cctgtgccag gagtcggcac acaagaaggg ccccagctac
      121 tatggggtct ggatcatgcg cgtcgtctct gacgaaggcg tggagaagct gctggtcacg
      181 gcccgtactc ggacgaccta taacgacatc aagatccgcg aattcaagac gatctccggc
      241 gtggtgtctt tcttcattgg ccttggcttt gcgcatgtcg acctgccgct tgaggcgggg
      301 acaagccgta cgcacaaact tgcgccgtca gacaaagacc catcagacaa gggcgctggc
      361 aactagcctc gtctgtctct ggctggtcgc cgcgccagcc tcagcgcaaa tggtcctggt
      421 catggagagc gacggctctc tgaccccgtc gcgctcccag aacagctttg cccggaacta
      481 caatgacggc attggtcagg gttcggccta cgatgggatc gctatcttcg gcgagttaga
      541 ggccgagcaa gagggcgtcc aagtcgcggc ccttgcccgc ccggctcccc tgccccgcgc
      601 agatgtcctc tccgggattc agaccacggc cttgcgctat gccggccatc ccggcctgcg
      661 ccgcgcggat ctctcggtcc gcgattggct gaccctctac cgcgccaatg tcgagataga
      721 gagtgcctac cggcaggatg cggtctcgag cgcaggcgcc cttggccttg ggcagttgat
      781 gccagcaacg gcacgcgacc tcggtgtcga cccgcacgat ccgcttcaga accttgacgg
      841 ttccgcccga tacctcgcga tgatgctgga gatgttcggc gatgctcgtc tcgcgctcgc
      901 agcttacaac gctggacccg atgcggtccg ccaatacggc ggcatccccc cctaccgaga
      961 aacccagacc cacgtggccc gcgtcatggc tgtcgtggcc cgattggaag gatcagattc
     1021 at
//
LOCUS       DTVW01000608            1094 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_173693, whole
            genome shotgun sequence.
ACCESSION   DTVW01000608 DTVW01000000
VERSION     DTVW01000608.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1094)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1094)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1094
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_173693"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..253
                     /locus_tag="EYO87_08000"
     CDS             <1..253
                     /locus_tag="EYO87_08000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HIC65924.1"
                     /translation="HALSLLQAGGRLVYAVCSLLPDEGEAQIAAALSRHPGLTVETSA
                     LTGTDPGWVTTGGGLRLRPDYWPERGGMDGFFMARLRLS"
     gene            416..>1094
                     /locus_tag="EYO87_08005"
     CDS             416..>1094
                     /locus_tag="EYO87_08005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_351821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyl transferase
                     subunit alpha"
                     /protein_id="HIC65925.1"
                     /translation="MVYLDFEKPLADIEGKAEELRAMARKSDNAVDVEKEAAALDKKA
                     GDLLKDLYKNLDPWRKTQVARHPDRPHCRDYVEALFSEYTPLAGDRAFGDDHAVMGGL
                     ARFNDAPCVVIGHEKGNDTKSRIHHNFGMARPEGYRKAIRLMDMAHRFGLPVITLVDT
                     PGAYPGKGAEERGQSEAIARCTQKSLEIGVPLVSVIVGEGGSGGAVAFATANRVAMLE
                     HSIYSVIS"
BASE COUNT          189 a          361 c          377 g          167 t
ORIGIN      
        1 ccatgcgctg tcgctgctgc aagcgggcgg gcgactggtc tatgcggtct gctcgctgct
       61 gcccgacgag ggcgaagccc agatcgcggc cgccctgtcg cggcatcccg gcctgacggt
      121 cgagacatcc gcgctgacgg gaaccgaccc tggctgggtc acaaccggcg gcgggctgcg
      181 gctgcggccc gattactggc cagagcgggg cgggatggac gggttcttca tggcaaggct
      241 gcgcctgtcc tgatccgcgc ccgacggcgg cttgcgcaag gtgccgcagg cggggcgccg
      301 gccgatatcc cggcagccgc cgtccggaag gcccgcgccc gcctcgcgtt gcatttcccc
      361 ccgtccccgc tcatataggg gcgcgaatgc gaacagcccg aaggcagccc gagacatggt
      421 ctatctggat ttcgaaaagc cgctggccga tatcgaaggc aaggccgagg aattgcgtgc
      481 catggcgcgc aaatccgaca atgcggtcga tgtcgagaaa gaggccgcgg cgctggacaa
      541 gaaggccggc gatctgctga aggatctcta caagaacctc gatccgtggc gaaagaccca
      601 ggtcgcgcgc catcccgacc ggccgcattg ccgcgactat gtcgaggcgc tgttttcgga
      661 atacacgcct ttggcgggcg atcgggcctt cggtgacgac cacgcggtga tgggcgggct
      721 ggcgcggttc aacgacgcgc cctgcgtggt gatcggccac gaaaagggca atgacaccaa
      781 atcccgcatc caccacaatt tcggcatggc ccggcccgaa ggctatcgca aggcgatccg
      841 gctgatggac atggcccacc gcttcggcct gcccgtgatc acgctggtcg atacgcccgg
      901 cgcctatccc ggcaagggcg ccgaggaacg cgggcaaagc gaggccatcg cccgctgcac
      961 ccagaaaagc cttgaaatcg gcgtgcccct ggtcagcgtc atcgtcggcg agggcggctc
     1021 gggcggggcg gtggccttcg ccacggcgaa ccgggtggcg atgctggaac attccatcta
     1081 ttcggtgatc tcgc
//
LOCUS       DTVW01000609            3000 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1739139, whole
            genome shotgun sequence.
ACCESSION   DTVW01000609 DTVW01000000
VERSION     DTVW01000609.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3000)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3000)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3000
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1739139"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            270..1196
                     /locus_tag="EYO87_08010"
     CDS             270..1196
                     /locus_tag="EYO87_08010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HIC65926.1"
                     /translation="MAMLLGDVGGTNARLAIARNGVIDDNTVTRFRGDDFASFDDVVR
                     RFQKDQDQPRITSVCIAVAGPVSGGKASLTNRDWDFDEHRLARLTDADHVRLINDLTA
                     LGYATPSLSGDGLAVLREAPEDRARNGQALVVGLGTGFNVCAVRALPGGAITAMEAEE
                     GHTHLPANIWQRLSETVGAEAARAFTSTEETFSGRGLSRFHAARTGTDPVPGERIARA
                     AEAGDPQAVATYDLFAEMVGLMCRELTLHFMPLEGLYLAGSVGRSIADRIDRFSTGLL
                     SQPFMRHIPENTPIFLIRDDMAALQGCLAALS"
     gene            1309..>3000
                     /locus_tag="EYO87_08015"
     CDS             1309..>3000
                     /locus_tag="EYO87_08015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor"
                     /protein_id="HIC65927.1"
                     /translation="MRAYLRAALVVFTALGFGGMALGQSSSPFSGLFGRGSQSEGPVD
                     LQITVAGNQDGLDREIRNSSLIKGALDEDRTTGQDVFAAARADYARILGLLYDKGFYS
                     PVINITLDGVEAAEVAPLDAPRVVRKVVIRVDPGPGFKFSRAQIAPVAPGSDIPGEYA
                     VGETAGTGTIKAAAAAGVDGWRNDGHAKADVGSQSIVADHDQNTVDSRIGLNPGPAVT
                     FGRLNMTGYERMKPRRLRKIAGLPEGQPFDPDDIETVRKRLRRTGVFSAITLEEADQL
                     GPDNSMDVNLTVVEQKLRRIGAGFEISNTDGAMVSAYWMHRNLLGGGERLRIEGKVKD
                     IGSKTSGRDEDLTFRLDRPATITPDTTAYVETRLARMREEDYDSDSASVGLGFNRIFS
                     DRLTTNLAVEYQFSRVFDANGQRDFKVLAFPLSVTWDQRDEPTDARKGYYLSADAAPF
                     KGFGGTDDGVRLLGEARGFYSLGQDDRFTLAGRARLGSVLGSDIRNTPRDYLFFSGGG
                     GTVRGQPYQSLGVEVIPSPDGPIMTGGMSVATLNAEMRFQVRERIGLVAFADYGRV"
BASE COUNT          505 a          986 c         1004 g          505 t
ORIGIN      
        1 cgttttctga tgctgaaacg cgcgatttcg ggggtttgtt cccctgcggc gattccggcc
       61 cggacaacgc cgcttctggc ggccggcaag acccctgccc cgcgcggcgt ctgggccgcc
      121 ggtcgcgatg gccggattcg tggcgcaaac cccgtcggcg gcggccggaa cagggtccgg
      181 cgcgtccatg gccttcgccc tctcgcaact ttcccggatc tcgcctaagg atggggaacg
      241 gcagaaaatg cagggcgagg agtaacggaa tggcgatgct tctgggggat gtcggcggca
      301 ccaatgcccg gcttgccatc gcgcgaaacg gggtcatcga cgataacacc gtgacccgct
      361 ttcgcggcga cgatttcgcc agtttcgacg atgtcgtgcg gcgctttcag aaggaccagg
      421 accagccgcg catcacctcg gtctgtatcg cggtggcggg gccggtcagc ggcggcaagg
      481 ccagcctgac gaaccgtgac tgggatttcg acgaacaccg ccttgcccgg ctgaccgatg
      541 cggatcatgt gcggctgatc aacgatctga ccgcgcttgg ctatgccacg ccgtcgctgt
      601 cgggcgacgg gctggcggtc ctgcgcgagg cgcccgagga tcgcgcccgc aacggtcagg
      661 cgctggtcgt ggggcttggg accggcttca acgtctgcgc cgtccgcgcg ctgcccggtg
      721 gcgcgatcac cgcgatggag gccgaagaag ggcacaccca cctgcccgcc aacatctggc
      781 agcgcctgtc cgaaaccgtc ggcgccgagg ccgcccgcgc cttcacctcg accgaggaaa
      841 ccttttccgg ccgtggcctg tcacggttcc acgccgcccg caccggcacc gatccggttc
      901 ccggcgaaag gatcgccagg gcggcagagg ccggcgatcc gcaggccgtc gcgacctatg
      961 atctgttcgc cgagatggtc ggcctgatgt gccgcgaact gacgctgcat ttcatgccgc
     1021 tggagggcct gtatctggcc ggcagcgtcg ggcgcagcat cgccgaccgg atagaccgct
     1081 tcagcaccgg gctgctgtcc cagcccttca tgcgccatat tcccgaaaac acgccgatct
     1141 tcctgatccg tgacgacatg gccgcgcttc agggatgcct ggccgcattg tcctgacgcc
     1201 acgatgcgcc aaaaaaggtt aacgcggccc cccttttcgc aggaattgct ggattccgcg
     1261 gcgcaatcct gctcaaatcg ccaaaagcaa gaattgcagg gcaggacgat gcgggcatat
     1321 ctgcgggcgg cacttgtcgt cttcacggca ctgggtttcg ggggaatggc gcttggccaa
     1381 tcctcgtccc cgttctcggg cctgttcggc cgcggcagcc aatccgaagg tccggtcgat
     1441 ctgcaaatca cggtcgccgg caaccaggac gggctggatc gcgaaattcg caacagttcg
     1501 ctcatcaagg gcgcgctgga cgaggatcgc accaccgggc aggacgtctt cgccgcggcc
     1561 cgcgccgatt atgcccggat cctgggcctg ctctatgaca aggggttcta ttctccggtc
     1621 atcaacatca cgctggacgg cgtcgaggcg gccgaggtcg cgccgctgga tgcgccccgg
     1681 gtcgtgcgca aggtcgtgat ccgcgtcgat cccggtcccg gcttcaagtt ctcgcgcgcc
     1741 cagatcgcgc ctgtcgcgcc cggatccgac attccgggcg aatatgccgt gggtgagacc
     1801 gcgggcaccg gcacgatcaa ggcggccgcc gcggcgggcg tggatggctg gcgcaatgac
     1861 ggccacgcca aggccgatgt cggcagccag agcatcgtcg ccgatcacga ccagaatacc
     1921 gtggacagcc gaatcgggct gaatcccggc ccggcggtta ccttcggcag gctgaacatg
     1981 acgggctacg agcggatgaa gccgcgccgc ctgcgcaaga tcgcgggcct gcccgaaggt
     2041 cagcccttcg atcccgacga tatcgagacg gttcgcaagc ggctgcgccg cactggcgtc
     2101 ttctcggcga tcacgctgga agaggccgac cagcttgggc cggacaacag catggatgtg
     2161 aacctgaccg tggtggaaca gaaactgcgc cggatcgggg cgggattcga aatctcgaac
     2221 accgatggtg cgatggtttc ggcctactgg atgcaccgca acctgctggg cgggggcgag
     2281 cggttgcgga tcgaaggcaa ggtcaaggat atcggctcga agaccagcgg gcgcgacgag
     2341 gacctgacct tccgtctcga ccgtccggcg acgatcacgc cggataccac cgcctatgtc
     2401 gaaacccggc tggcccggat gcgcgaagag gattacgatt ccgattcggc ttcggtcggg
     2461 ctgggcttca accgtatctt cagcgaccgg ctgaccacca acctggccgt cgaataccag
     2521 ttctcgcgcg tgttcgacgc caacgggcaa cgggatttca aggttctcgc tttcccgctg
     2581 agcgtgacat gggaccagcg cgacgaaccg accgacgcca ggaagggcta ttatctcagc
     2641 gccgatgccg cgcccttcaa gggcttcggc ggcaccgatg acggtgtccg cttgctgggc
     2701 gaggcgcgcg gtttctattc gctgggccag gatgacaggt tcacgctggc cggccgcgcc
     2761 cggctgggca gcgtgctggg cagcgatatc cggaacacgc cgcgcgacta tctgttcttt
     2821 tcgggcggcg gcggaaccgt gcgcggccag ccctatcaat cgctgggcgt cgaagtgatt
     2881 cccagcccgg acggcccgat catgaccggc ggcatgagcg tcgcgacgct gaacgccgag
     2941 atgcggttcc aggtccgcga gcggatcgga ctggtcgcct ttgccgatta cggccgcgtc
//
LOCUS       DTVW01000610            2416 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1741541, whole
            genome shotgun sequence.
ACCESSION   DTVW01000610 DTVW01000000
VERSION     DTVW01000610.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2416)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2416)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2416
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1741541"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..964
                     /locus_tag="EYO87_08020"
     CDS             <1..964
                     /locus_tag="EYO87_08020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010394189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="YjbH domain-containing protein"
                     /protein_id="HIC65928.1"
                     /translation="DAGRPAGLVYSDNVYPRFRWSLSPYLELGVFDAQDGLTYEVGGQ
                     ARASYEISPGLILTGALRQRVFGNIDQRGPGIPGNRGEYYTPEEYEARPELETVDGVP
                     RVRSDTRMYTGNSSPVIPELTLAYYAKATPNIYTRVTAGLLERAYGGVSAEVLWKPAD
                     SNLGIGAEVNRVRKRDFDQLLSFRDYEVTTGRVSVYYEVTQGFAKGFTAQLDLGKYLA
                     GDKGATVSVTREFANGWRIGAFATKTDLSAEQFGEGSFDKGISLSIPITWATGQPTRD
                     RASTTLRSLSRDGGARVDVSGRLYDRVRDAQDAKLYDGWGRFWR"
     gene            961..1623
                     /locus_tag="EYO87_08025"
     CDS             961..1623
                     /locus_tag="EYO87_08025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjbF family lipoprotein"
                     /protein_id="HIC65929.1"
                     /translation="MKTAGTIILAALALTTLSGCGNGTADEQDNGIFGALSQSARQAI
                     AARDTARQEPAAPPKSPAEAAAEALQVNPAPLIQAGFESLGRNQVMAMTGQNGAMRTY
                     MTPTEEALILRGGMLVGTRGLGNDLSVAEPQTEALIRAGASGSGTRVMRYFTGDGLER
                     PLQFACTTEPGPKSGVTLENCDGHGVSFQNSYISQGGQIVVSRQWIGPALGYVTIQTL
                     RP"
     gene            complement(1897..2106)
                     /locus_tag="EYO87_08030"
     CDS             complement(1897..2106)
                     /locus_tag="EYO87_08030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65930.1"
                     /translation="MIMTKFATFAAALGLTASSALAGGYVAPVVDVEPVVVEEKPASS
                     NAGLVVPALLLLGVIAAVASNNDDS"
     gene            complement(2300..>2416)
                     /locus_tag="EYO87_08035"
     CDS             complement(2300..>2416)
                     /locus_tag="EYO87_08035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_355069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65931.1"
                     /translation="GTVAAGLWFSLRLDTPAGPSIVVAAAIFFVLSQVFRRG"
BASE COUNT          465 a          799 c          773 g          379 t
ORIGIN      
        1 cgatgccgga cggcccgccg gtctggtcta ttcggacaat gtctatccgc gctttcgctg
       61 gtcgctgtcg ccctatctgg aactgggcgt cttcgatgcc caggacgggc tgacctatga
      121 agtcggcggc caggcgcggg ccagctacga gatctcgccc ggcctgatcc tgaccggcgc
      181 gctgcgccag cgtgtcttcg gcaatatcga ccagcggggt ccgggtattc cgggcaatcg
      241 cggcgaatat tacacgcccg aggaatacga ggcccggccc gaacttgaaa cggttgatgg
      301 ggtgccgcgc gtgcggtcgg atacgcggat gtataccggc aattccagcc ccgtgatccc
      361 cgaactgacg ctggcctatt acgcgaaggc cacacccaac atctataccc gcgtcaccgc
      421 cggcctgctg gaacgggcct atggtggcgt ctcggccgag gtgctgtgga aacccgccga
      481 ttccaacctg ggcatcgggg ccgaggtgaa ccgggtccgc aaacgcgatt tcgatcagct
      541 tctcagcttc cgcgactacg aggtcacgac gggacgcgtt tcggtctatt acgaagtcac
      601 gcaaggcttt gcgaagggtt tcaccgccca actcgatctt ggcaagtatc tggcgggcga
      661 caagggcgcg accgtcagcg tgacgcgcga attcgcgaat ggctggcgga tcggtgcctt
      721 cgcgaccaag accgacctgt cggccgagca attcggcgag ggcagcttcg acaagggcat
      781 cagcctgtcg atcccgatca cctgggccac cggacagccg acgcgcgacc gcgcctcgac
      841 caccctgcgg tcgctgtcgc gcgatggcgg ggcgcgggtg gacgtgtcag gccgcctcta
      901 tgaccgcgtc cgcgacgcgc aggacgccaa actctatgac ggctggggga ggttctggcg
      961 atgaagaccg caggcacgat catccttgcc gctttggcgc tgacgacctt gtcgggttgc
     1021 ggcaacggca cggccgacga acaggacaac ggcatcttcg gcgcgctgtc gcaatccgcc
     1081 cggcaggcca tcgccgcgcg ggacacggcc cggcaagagc cggccgcacc gccgaaatcc
     1141 cccgccgagg ccgcggccga ggcgctgcag gtcaatcccg cgccgctgat ccaggcgggt
     1201 tttgaatcgc tgggccgcaa ccaggtgatg gcgatgaccg gccagaacgg tgccatgcga
     1261 acctacatga cgcccacgga agaggcgctg atcctgcgcg gcggaatgtt ggtgggcacc
     1321 cgtggcctgg gcaacgatct gtccgtggcg gaaccgcaga ccgaggcgct gatccgcgcc
     1381 ggcgcgtcag gcagtggcac gcgcgtgatg cgctatttca cgggcgatgg cctggaacgg
     1441 ccgctgcaat ttgcctgcac caccgagccc ggccccaagt ccggcgtgac cctggaaaac
     1501 tgcgacggtc acggcgtcag tttccagaac agctacattt cacaaggcgg ccagatcgtc
     1561 gtgtcgcgcc aatggatcgg cccggccctg ggctacgtga cgatccagac gctgcgcccc
     1621 tgatccgcca tcaggccggc catccggacc ggtcgccagc gcgggccgca cctgttcgac
     1681 gcctcgatca tggccagcca tgccgcaccg attggcaagc ccgctttcag agcccgtttg
     1741 ccggcggagg atatgacatc gcaggcgacg cgtcgatggc gggcggcagg ccgtggcgcc
     1801 accagcaagg tcgaagaaca caaaacgaaa ggggggctgg cacgaatgcc agccccccgt
     1861 tgaaacagac cgggacgtgc ccgatccgct tcgaaatcag ctgtcgtcgt tgttggaagc
     1921 gacggcggcg atcacgccca gcagcagcag ggcggggaca accaggccag cgttcgagga
     1981 agccggcttc tcttccacga cgacgggttc gacgtcgacg acaggtgcga catagccacc
     2041 ggccagagcc gaggaagcgg tcaggccgag ggcggcagcg aaagtagcga atttggtcat
     2101 gatcatgctc cgtttcgttt gaaggctgcc gtctccggca acatcgatgc gacagttaca
     2161 caatccagaa ctcttgaaaa gcagcatcaa ttcaaaatct ccgaggggtt gtctctactg
     2221 ttgcataatc gccaacaccg cgccgccgcg atcggttcct gcccctgccc cgcctcgccg
     2281 caagtgttgc aaagctgcac tagccacgac gaaatacctg cgacaaaacg aaaaatatcg
     2341 ccgccgcaac gactatcgac ggacccgccg gcgtatccag ccgcaaagag aaccacagcc
     2401 ccgccgcaac cgtgcc
//
LOCUS       DTVW01000611            4505 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1747858, whole
            genome shotgun sequence.
ACCESSION   DTVW01000611 DTVW01000000
VERSION     DTVW01000611.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 4505)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4505)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4505
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1747858"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..143)
                     /locus_tag="EYO87_08040"
     CDS             complement(<1..143)
                     /locus_tag="EYO87_08040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase II"
                     /protein_id="HIC65932.1"
                     /translation="MEKNKKSLTIGIAAALFALTADQATKALVVAKAAALSSGVAVFP
                     GFNL"
     gene            667..1095
                     /locus_tag="EYO87_08045"
     CDS             667..1095
                     /locus_tag="EYO87_08045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005645241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HIC65933.1"
                     /translation="MLTIGSLAKKTGTKVQTIRYYEQIGLMPEPGRTGGGQRRYGDAE
                     LDRLSFIRHSRQLGFPLDVIRELLDLSDHPDKSCDEADAIARRQLKQVEQRLARLKAL
                     RTELKRMVHECSGGRTADCRVLEVLRDHTECLTQHDQMGA"
     gene            1231..2733
                     /locus_tag="EYO87_08050"
     CDS             1231..2733
                     /locus_tag="EYO87_08050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006931979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase"
                     /protein_id="HIC65934.1"
                     /translation="METEMRGSIWAVASILGASVANAQNLPQASSPWYQQAQEALQER
                     LANQPNTKRAKNVILFVADGNGVGTNYASRLFAGQQQGGLGDDYVQPFEAFPNVALIK
                     TYSTNGQTPDSAPTASAMNSGIKTKNDLINVTENVAVSDCAAGLKNGVRTFAEIAAEQ
                     GKSVGVVSTARITHATPAAVYARTANRDWEDNSDIPEGCAQPDIAVQLLDQMKNGVVD
                     VAMGGGRRHFLPQDATDAEGQPGRRTDGRDLVQEARDAGAQVVFASDDFAALQASGNA
                     PILGLFESSHMQYEADRSGEPSLAEMTATTINALSANDQGFYMMVEAGRVDHANHGGN
                     LYRTVTDGKAFADAVASAIELTNPEDTLIIVTADHEHAIAFNGYCGRGSSITGLCRQI
                     DEAGTEALAEPALGDDGKPYTVAGYLNGPGSVMQEQADGTWSGSRPEVSADEAEGRDY
                     MQQALLPTSSETHSGEDVALFARGPWAHLFGGVMEQNEIFSVMNYAIKGQ"
     gene            2907..3533
                     /locus_tag="EYO87_08055"
     CDS             2907..3533
                     /locus_tag="EYO87_08055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013301506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HIC65935.1"
                     /translation="MGTGKLAETIDEKNEQQRRVLWIVLLLNLAIAIGFFVTGAIGDS
                     SGLIANGLDNTSDTVVYAISLFAVSRAGKWKRAAANVSGGMLLLFAVGVLVDAVRRYY
                     AGSEPLGGLMIAMSVIAAVVNVICVWLLSRLKEPDVNVRAANTFSWNDFAANGGILLA
                     GGLVWWLGDNWPDLAVGVGIAGVFLWGGVKILRDAHGEHHKAVHGDEG"
     gene            3530..4216
                     /locus_tag="EYO87_08060"
     CDS             3530..4216
                     /locus_tag="EYO87_08060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009523279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter"
                     /protein_id="HIC65936.1"
                     /translation="MNAAWAYTLIPAAVTLLAAVIAVNLRPGAVLVSAIQHFAAGVVF
                     AAAAGEIMPDIAHSGSPFVTIIGGFAGIAVMLGIRQLERVIKGPAGFLTLVGVDLLID
                     GLVLGIAFAAGGQAGILLTIALSVEILFLGLAIVTELSKTTQSRIRIILTVVALLVFL
                     PLGALVATPIAGFPDQYITAFLSFGLIALLYLVTEELLAEAHEIPDRPWVAAMFFVGF
                     LLLLALEEVM"
     gene            4247..>4505
                     /locus_tag="EYO87_08065"
     CDS             4247..>4505
                     /locus_tag="EYO87_08065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010138164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HIC65937.1"
                     /translation="MPHDHAHPHIDPDSGDRRVSIAIWANGILTVAQIVGGILSGSLA
                     LIADALHNFSDMASLVIAFAARKIARRPADASMTFGYGRIEI"
BASE COUNT          836 a         1448 c         1423 g          798 t
ORIGIN      
        1 aggttgaagc cgggaaagac ggcgacgccg gaactgagcg cggctgcctt ggcgacgaca
       61 agcgccttgg tcgcctgatc ggctgtcagc gcgaaaagcg ccgcggcgat tccgatcgtc
      121 agtgatttct tgtttttttc cataatctta tcctgaccag atgtccagaa acggcctcag
      181 atcgaaatcg gcggacagac ccgttgccac cctgttctgg cggctgccgc aaagcgatcg
      241 gtcggcaagt cttccaacca agccgggccc gttcggagaa gggaattcca tgatcgtgtt
      301 tgtcccagat tgcccgttca gcctttcgaa aaccccgtga agaccttcgc cggtcgatgg
      361 ttccggaccc gaaggacatc accagcctga cggccctcta gccgaccggc gccctttgaa
      421 ccatagggca tttccggacc ggcgaggccg ggcgcgccag ggtgcccgcg aatgcccggc
      481 gccgcgaccg gacgcccgac agcatggccg cggcccgatt cccggctcga cttgtcgcat
      541 aaagcctctg gtggctggag gttcaagcac ggctgctgcg acaacacgtc acgcgcaccc
      601 gctagccggc acttgcaaat ccgtcgctcg aaacctacaa ctactttacc ttttacggag
      661 gcgatgatgc tgacgatcgg cagtctggcg aaaaagaccg gcaccaaggt gcagaccatc
      721 cggtattacg aacagatcgg gctgatgccg gaaccgggcc ggaccggggg cgggcagcgg
      781 cgctatggcg atgccgaact cgaccgcctg tccttcatcc gccactcgcg gcagctcggc
      841 tttccgctgg acgtgatccg cgagctgctg gatctcagcg accatcccga caaatcctgc
      901 gacgaggcgg atgcgatagc gcgccgtcag ctgaaacagg tcgaacagcg ccttgcgcgc
      961 ctgaaggcgc ttcgcaccga actgaagcgg atggttcacg aatgcagcgg cgggcgcacc
     1021 gccgactgcc gggtgcttga ggtgctgcgc gaccacaccg aatgtctcac ccagcacgac
     1081 cagatgggcg cctgacaggc ccgctgccgg tcagcgccgg gcccggattc gaacgctgat
     1141 cctcctgatg cacccccatt catggcagtc atctgcgaat ggtcacgaag atgtcgcact
     1201 gcccgactag aacacgggcg aacaacatcg atggagaccg agatgcgtgg atcgatatgg
     1261 gcagtcgcgt caatccttgg cgccagcgtc gcaaatgcgc agaacctgcc gcaggcgtcg
     1321 tcgccctggt atcagcaggc ccaggaggcg ctgcaagaac ggcttgccaa ccagcccaac
     1381 accaagcgtg cgaaaaacgt catcctgttc gtggccgacg gcaacggtgt cggcacgaac
     1441 tatgcctcgc ggctctttgc cggtcagcag cagggcgggc tgggcgacga ttatgtccag
     1501 ccgttcgagg cttttcccaa tgtcgccctg atcaagacct attcgacaaa cgggcagacc
     1561 ccggattccg cccccacggc aagcgcgatg aacagcggca tcaagacgaa aaacgatctg
     1621 atcaacgtca ctgaaaacgt cgccgtcagc gactgcgcgg ccggacttaa gaacggcgtc
     1681 cgcacctttg ccgaaatcgc cgccgagcaa ggcaagtccg ttggcgtcgt ctcgacggcg
     1741 cgcatcaccc atgccacgcc ggcggcggtc tatgcgcgca ccgccaaccg cgactgggaa
     1801 gacaattccg acattcccga aggctgcgcc cagcccgata tcgcggttca gcttcttgac
     1861 cagatgaaga acggcgtcgt cgatgtcgcc atgggcggcg gtcgcaggca tttccttccc
     1921 caggacgcaa ccgatgccga gggtcagccg ggccgccgca ccgacgggcg cgatcttgtc
     1981 caggaggcgc gggacgccgg cgcccaggtg gtgttcgcaa gcgacgattt cgccgcgctc
     2041 caggccagcg gcaatgcgcc gatcctcggg ctgttcgaat ccagccacat gcagtacgag
     2101 gccgatcgca gcggcgagcc ctcgcttgcc gaaatgaccg cgaccacgat caacgcgctg
     2161 tccgcgaacg accagggctt ttacatgatg gtcgaggccg gccgggtcga tcacgccaac
     2221 cacggcggca atctctatcg cacggtgacg gacggcaagg ccttcgccga tgcggtcgcc
     2281 agcgccatcg aactgacaaa tcccgaagac acgctcatca tcgtcaccgc cgaccacgaa
     2341 cacgccatcg ccttcaacgg ctattgcggc cgcggctcct cgatcaccgg cctttgcagg
     2401 cagatcgacg aggccggcac cgaggcgctg gccgaaccgg cactgggcga tgatggcaag
     2461 ccctataccg tcgccggata tctcaatggt ccgggctcgg tcatgcagga acaggccgac
     2521 ggcacctggt caggatcccg gcccgaggtt tcggcggacg aggccgaggg acgcgactac
     2581 atgcagcagg cgctgctgcc gacaagttcc gaaacccatt ccggcgaaga cgtggcgctg
     2641 ttcgcgcgcg gtccctgggc gcatctgttc ggcggcgtga tggagcagaa cgagatcttt
     2701 tcggtgatga actacgcgat caaaggacag tagccgcggc ggtcgcgcaa gcgcgtcaaa
     2761 ccggacgact tcgacggcgg cgccccgaaa acgggcgccg ccttcccttc ggccgggcgc
     2821 atccggctgt gcggcaggac cggcgaacca cgcgccaagc cggaacccgt tccgggcccg
     2881 tagcgttccc cgaaccataa cgtcgcatgg ggacaggaaa attggccgag acgatcgacg
     2941 aaaagaacga acagcagcgc cgtgtgttgt ggatcgttct gctgctcaac ctcgccatcg
     3001 caatcggatt cttcgtcacc ggcgcgatcg gggattctag cggtcttatc gccaacgggc
     3061 tggacaacac ctccgacacg gtcgtctacg ccatcagcct gttcgcggtg tcacgcgccg
     3121 gcaaatggaa gcgggcggcc gccaacgttt cgggcggaat gctgctgctg ttcgcggtcg
     3181 gcgtcctcgt cgatgccgtc cggcgctatt acgccgggtc cgaaccgctg ggcgggctga
     3241 tgatcgcgat gtcggtgatt gcggccgtgg tcaacgtgat ctgtgtctgg cttttatcac
     3301 ggctgaagga acccgacgtc aatgtgcggg ccgcgaacac cttcagctgg aacgattttg
     3361 ccgcaaatgg cggcatcctt cttgccggag gactggtctg gtggctgggt gacaactggc
     3421 ccgatctggc cgtcggcgtc ggcatcgccg gggtgttcct gtggggcggc gtgaagatcc
     3481 tgcgcgatgc ccatggcgag catcacaagg cagtgcatgg agacgaagga tgaacgccgc
     3541 ctgggcctat accctgattc ccgccgccgt cacgctgctg gcggcggtca tcgcggtcaa
     3601 cctgcggccc ggggcggtcc ttgtcagcgc catccagcac tttgccgcag gcgtggtctt
     3661 tgccgccgcc gccggtgaaa tcatgccgga tatcgcccat agcgggtctc cgttcgtgac
     3721 gatcatcggt ggattcgcgg gcatcgcggt catgctgggg atccgtcagc tggaacgggt
     3781 catcaagggg ccggccggtt tcctgacact ggtcggggtg gatcttctga tcgacgggct
     3841 ggttctgggg atcgccttcg cggcaggcgg gcaggccgga atattgctga cgatcgcatt
     3901 gagcgtcgag attctgttcc tggggctggc cattgtcacg gaattgtcaa agacgacgca
     3961 atcgcggatc aggatcatcc tgaccgtcgt ggccctgctg gtgtttctgc ccttgggcgc
     4021 gctggtcgcg acaccgattg ccgggtttcc ggaccagtat attactgcct ttctcagctt
     4081 cggcctgatc gcgctgcttt acctcgtgac cgaggaattg ctggccgagg cccatgaaat
     4141 acccgaccgg ccctgggtcg cggcgatgtt cttcgtcggc ttcctgctgc tgctggcgct
     4201 tgaggaagtg atgtgatgaa ccgacccgcc agaagatgga tccatcatgc cgcatgatca
     4261 cgcccacccg catatcgacc ccgattcagg cgatcgtcgg gtatcgatcg cgatctgggc
     4321 caacgggatc ctgaccgtcg cgcagatcgt cggcggcatt ctttcgggca gtctcgcgct
     4381 gattgcagac gcgctgcaca atttctcgga catggcgtcg ctggtgatcg cattcgcggc
     4441 ccgcaagatc gcccgccggc cggccgatgc cagcatgacc ttcggctatg gccggatcga
     4501 gatcg
//
LOCUS       DTVW01000612            1125 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1749857, whole
            genome shotgun sequence.
ACCESSION   DTVW01000612 DTVW01000000
VERSION     DTVW01000612.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1125)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1125)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1125
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1749857"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(253..>1125)
                     /locus_tag="EYO87_08070"
     CDS             complement(253..>1125)
                     /locus_tag="EYO87_08070"
                     /inference="COORDINATES: protein motif:HMM:PF13844.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65938.1"
                     /translation="AALHRDASGGLTGHTADNRLKLFAAKPAPLQITYMGYCNTTGVR
                     AIDYILSDHLIDPAGQDEFYSEKLLRLPRSICCYTSPDYAPAVKTGAATPGATVTFGC
                     FNNLTKFNAEVVALWSKILGAAGDARLVLKCKQLGDDAMRQRVGDMFRTQGIAAERLD
                     LRGQSAHPDLLAQYNDIDIALDPLPFAGMTTTCEALWMGVPVVTLAGGSRAGRVGVSI
                     LSAVGLEEFIAETADAYVEIAARLAADKARMAELKASIRGRMAASDLCDTEAMARAVE
                     DAYRTIWRNWCAGG"
BASE COUNT          187 a          348 c          375 g          215 t
ORIGIN      
        1 cgcgatcggc ttgccgccga aatcggcgat ggccttcttg tggacggcgg cgcggtcttg
       61 cagatcggcg ctggcgatca tgccggtttt ctgatcgtta tgatatttga cgaggtagag
      121 gacgatctcg ctcacagggg cgttccttcg ggttgctgat cggatatcgc caagtctggc
      181 gttctcgcgc acccggcggc aagcgaaatc gcccggcggt gtttcacgtg aagcattggc
      241 gcagtgcgcc tctcatcccc cagcgcacca gttgcgccag atcgtgcggt aggcgtcctc
      301 gacggcgcgc gccatggctt ccgtatcgca caggtctgag gcggccatgc gcccgcggat
      361 ggaagctttc agctcggcca tgcgggcttt gtccgccgcc agccgggcgg cgatctccac
      421 ataggcatcc gccgtctcgg cgatgaattc ctccagccca acggcggaga ggatactcac
      481 gccgacccgg ccggcccggg agcccccggc caaggtgacc accggcacgc ccatccacag
      541 cgcttcgcaa gtggtggtca tgccggcgaa gggcaacgga tcgagagcga tgtcgatatc
      601 gttatattgc gccagaagat cggggtgggc ggactggccg cgcagatcga gccgctccgc
      661 cgcgatgccc tgggtgcgga acatgtcgcc gacgcgctgg cgcatcgcat cgtcgcccag
      721 ctgcttgcac ttcagcacca ggcgggcatc gccggcggcg ccgaggattt tgctccataa
      781 cgccaccacc tcggcattga acttggtgag attgttgaag cagccgaagg tgacggttgc
      841 gcccggcgtg gcggcgcctg tttttaccgc cggcgcatag tcgggcgacg tgtagcagca
      901 gatgcttcgc ggcaatctaa gcagcttttc gctatagaat tcatcttgcc ccgccgggtc
      961 gatcaggtga tcgctcagga tatagtcgat cgcccgcacg ccggtggtgt tgcaataccc
     1021 catataggtg atctgcaggg gagcgggttt ggcggcgaac agcttgagcc ggttatcggc
     1081 ggtatggccg gtgagaccgc cggacgcatc acggtgaagt gccgc
//
LOCUS       DTVW01000613            1510 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1750711, whole
            genome shotgun sequence.
ACCESSION   DTVW01000613 DTVW01000000
VERSION     DTVW01000613.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1510)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1510)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1510
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1750711"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..317)
                     /locus_tag="EYO87_08075"
     CDS             complement(<1..317)
                     /locus_tag="EYO87_08075"
                     /EC_number="3.6.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013066200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dUTP diphosphatase"
                     /protein_id="HIC65939.1"
                     /translation="MHQTPTIRIMRLPEGDPGVALPGYATPGAAGADLRANFPPPARV
                     SGITLGPGQRALIPTGLALEIPQGWEVQIRARSGLALKHGIALPNAPGTIDCDYRGPL
                     GVIL"
     gene            complement(395..934)
                     /locus_tag="EYO87_08080"
     CDS             complement(395..934)
                     /locus_tag="EYO87_08080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_351989.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-3"
                     /protein_id="HIC65940.1"
                     /translation="MARRPHNAPPTRDTGPRVNERIRVAEIRLIGPEGENVGVVSPSV
                     GLDMARESGLDLVEISPNATPPVCKVMDLGKFKYEQQKREAEARKKQKIIDIKEVKFR
                     PGTDTHDYDVKMRNVMKFLEGGDKVKVTLRFRGREMAHQDLGLDLLNRVRDDVGEAGK
                     VEAMPKLEGRQMVMMIAPR"
     gene            1130..>1510
                     /locus_tag="EYO87_08085"
     CDS             1130..>1510
                     /locus_tag="EYO87_08085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010392579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65941.1"
                     /translation="MRKAAFAILILLLVAAGWWWITYLDEGATGPAIIGSAPPDVRVP
                     VAEGVTEPVKLPTATPDATPETAGETAPIAVQPATGSDGTEVEIGQQDGDADAETASD
                     AAGAAADAAADAAAIAADAAAEAVR"
BASE COUNT          247 a          498 c          500 g          265 t
ORIGIN      
        1 aggatcacgc ccagaggccc gcgataatcg caatcgatcg tgccgggcgc gttgggcagc
       61 gctatgccgt gtttcagcgc aaggcccgag cgtgcacgga tctgcacctc ccatccctgt
      121 ggaatttcca atgccaggcc ggtggggatc agcgcccgct ggccgggccc caaggtgatc
      181 cccgacacgc gcgccggcgg cggaaaattc gcccgcagat cggcacccgc cgcgccgggc
      241 gtggcatagc cgggcagcgc cacaccgggg tcgccctcgg gcaggcgcat gatccggatg
      301 gtaggagtct ggtgcatccc gcgccccttt caaacgcaag ggccgcgcgg ctggcgccgg
      361 cgcggcccgt ttgccgtgat cgccacggcg cggatcagcg cggcgcgatc atcatgacca
      421 tctggcgacc ttccagcttg ggcatggcct cgaccttgcc cgcctcgccg acatcgtcgc
      481 gaacccggtt cagaagatcc agccccagat cctgatgcgc catctcgcgg ccccggaaac
      541 gcagcgtgac cttgacctta tcgccgcctt cgagaaactt catcacgttg cgcatcttca
      601 catcgtaatc atgggtatcg gttcccgggc ggaacttcac ctccttgatg tcgatgatct
      661 tctgcttctt gcgggcctcg gcctcgcgct tttgctgttc atacttgaac ttgccaagat
      721 ccatgacctt gcagaccggg ggggtcgcgt tgggcgagat ctcgaccagg tccagaccgc
      781 tctctcttgc catgtccagt ccgaccgaag gcgagacgac gccgacattt tccccttcgg
      841 gaccgatcag gcggatttcg gcgacgcgga tgcgttcatt gacgcggggg ccggtgtcgc
      901 gggtgggcgg tgcgttatgc ggtctgcggg ctatggcgat gctcctttta tggccatgcg
      961 ggtgagtggc gtgaaaatag gcttcccgcc ggcgcgattc aaccggattt gatccggcaa
     1021 gaggcgcaag aagccgcttt tcgtggcaga atgacgggca gcggcggctt ttcggcttgt
     1081 cgcgcctgtg tcatagatcg gcgacaatga cgggaaggac aacggcacga tgcgcaaagc
     1141 ggctttcgcg atcctgattc ttctgctggt ggcggccggc tggtggtgga tcacctatct
     1201 ggacgagggt gcgaccggcc cggccatcat cgggtccgcc ccacccgatg tgagggttcc
     1261 cgtcgctgag ggtgtgacag aaccggtcaa gctgcccacg gcgacccccg acgccacgcc
     1321 ggagacggct ggcgagacgg ccccgatcgc cgtccagccc gcaaccggat ccgacgggac
     1381 cgaggtcgag attggccaac aggacggcga cgcggatgcc gaaacggcca gcgatgccgc
     1441 cggggcagcc gcggatgccg cagccgatgc cgcagccatt gccgccgatg ccgccgccga
     1501 agcggtccgg
//
LOCUS       DTVW01000614            2663 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1751048, whole
            genome shotgun sequence.
ACCESSION   DTVW01000614 DTVW01000000
VERSION     DTVW01000614.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2663)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2663)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2663
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1751048"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1304
                     /locus_tag="EYO87_08090"
     CDS             <1..1304
                     /locus_tag="EYO87_08090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011749138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HIC65942.1"
                     /translation="LSHRRVLNIALPIVLSNATVPLLGLVDTGVVGQLGQAEPIGAVG
                     IGAVILTSIYWVFGFLRMGTSGLVAQSHGAGDGAQVGAHLLRALTIAGAVGLAMILAR
                     APLFWAAFRLAPASAEVEALARDYLTIRIWGAPATIALYALTGWLIAIERTRAVLALQ
                     VLQNGLNVMLDLWFVLGLGLGVAGVAWATLISEWGGVVLGLYFARHALRAAVGAARRL
                     TTLFARDKLNRLLRVNVDIMIRSVLLQASFTSFLFLGAAQGDVTLAANQVLVQFLSLT
                     AFALDGFAFAAESLVGQAVGARRPDRLRRAAILTSQWGIGGALVLGLAFWVAGGAIID
                     LLTTAPAVRTEARLYLFWMGAAPLIGIASWMFDGIFIGATMTRDMRIAMIQSVALYGL
                     AVVTLPPIFGNHGLWAALMILNAARGITMALRYPRAEAAAA"
     gene            complement(1512..1829)
                     /locus_tag="EYO87_08095"
     CDS             complement(1512..1829)
                     /locus_tag="EYO87_08095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010394038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1476 domain-containing protein"
                     /protein_id="HIC65943.1"
                     /translation="MTTFDDRERGYESKFAHDADLQFRAEARRNRLLGEWAAGVLGKT
                     GEDARTYAMTVVTSDFEEPGEEDVYRKVASDLEGKADSATIRAKMAELTLEARRQILE
                     EGK"
     gene            1961..>2663
                     /locus_tag="EYO87_08100"
     CDS             1961..>2663
                     /locus_tag="EYO87_08100"
                     /EC_number="6.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HIC65944.1"
                     /translation="MAPRRKKVYEGKAKILYEGTEPGTLVQYFKDDATAFNAQKRATI
                     EGKGVLNNRLSEFFMNGLTNIGVPNHFIRRINMREQLIRQVEIVPLEVIVRNFAAGSL
                     SKRLGLEEGTLLPRPIVEYSFKNDELGDPMVSEEYIIAFGWATQQDLDDIVSLALRVN
                     DFLSGVFYGVGIKLIDFKIEIGRVWDNDFMRLIVADEISPDSCRLWDVKTGQKLDKDV
                     FRRDLGNLTDAYTEVA"
BASE COUNT          393 a          869 c          885 g          516 t
ORIGIN      
        1 cgctgagtca tcggcgggtg ctgaacatcg ccttgccgat cgtgctgtcg aacgcgaccg
       61 tgccgctctt ggggctggtc gataccggcg tagtgggcca gcttggtcaa gccgaaccca
      121 tcggcgcggt tggcatcggc gcggtcatcc tgacctcgat ctactgggtc ttcggcttct
      181 tgcggatggg cacctcgggg cttgtcgcgc aaagccacgg cgcgggcgac ggcgcgcagg
      241 tcggcgccca tctgctgcgt gcgctgacca tcgccggtgc ggtcgggctg gcgatgatac
      301 tggctcgggc gccgctcttc tgggccgcct tccgcctggc cccggcctcg gccgaggtcg
      361 aggcgctggc ccgtgattat ctgacgatcc gcatctgggg cgcgcccgcg accatcgcgc
      421 tttacgcact gaccggctgg ctgatcgcga tcgagcgcac gcgcgccgtg ctggccttgc
      481 aggtcttgca gaacgggctg aacgtgatgc tggatctgtg gttcgtgctg ggcctgggac
      541 tgggcgtcgc gggggtcgcc tgggccacgc tgatctcgga atggggtggg gtggttctgg
      601 ggctgtattt cgcccgccac gccctgcgcg ctgcggtcgg cgcggcgcgg cggctgacca
      661 cgctgtttgc ccgcgacaag ctgaaccggc ttttgcgcgt gaacgtcgac atcatgatcc
      721 ggtccgtgct gttgcaggcc agcttcacct cgttcctgtt tctgggcgcg gcgcaagggg
      781 atgtgacgct ggcggccaat caggtgctgg tgcagttcct gtcgctgacc gccttcgcgc
      841 tggacggttt cgcctttgcg gccgaaagcc tggtgggaca ggcggtgggg gcgcggcggc
      901 ccgaccggtt gcgccgcgcc gcgatcctga cctcgcaatg ggggatcggc ggggcgctgg
      961 ttctgggtct tgccttctgg gtcgcgggcg gcgcgatcat cgatctgctg acgacggcgc
     1021 cggcggtccg gaccgaggcg cgcctttacc tgttctggat gggcgccgca ccgctgatcg
     1081 gcattgcaag ctggatgttc gacggcatct tcatcggcgc gacgatgacc cgcgacatgc
     1141 gcatcgcgat gatccagtcc gtggcgctgt atgggctggc cgtcgtcacg ctgccgccga
     1201 tcttcggcaa tcacggactg tgggcggcgc tgatgatcct gaatgcggcg cgcgggatca
     1261 ccatggccct gcgctatccc cgcgccgagg cggccgccgc ctgaacaggg cttcgcgccc
     1321 tttcgtgcgg cttcctgccc ggatcgccgt catggcgccc caaggaatgc cgggtctcgt
     1381 cgggacatcg acctgggccc ttcggtcatc gcccgccgcg tgccgggact tgacccttcg
     1441 gtcggcaagg cgcccgcaac gcaaatgcag cctgcaatgt cgcctgtcct gcggcgcccg
     1501 gcggcgggat cctacttgcc ctcttccagg atttgccggc gcgcctcgag cgtcagctcg
     1561 gccatcttcg cgcggatcgt cgcgctgtcg gccttgccct ccaggtcgga tgcgaccttg
     1621 cgatagacat cctcttcgcc cggttcctcg aaatccgagg tcacgaccgt catcgcatag
     1681 gtccgcgcat cctcgccggt cttgcccaga acaccggcgg cccattcgcc cagcagccgg
     1741 tttcgccgcg cctcggcccg gaattgcaga tccgcgtcat gcgcgaattt cgattcatat
     1801 ccacgctcgc ggtcgtcaaa ggtggtcatc tcgtggcctc ctgctatcgg tccgtcccgt
     1861 tatccctgct ggaaggccgc gctgcaagcc ttcgtattgc ccccgaggac ggttctgcga
     1921 taagccgcag gacgagcgac aggcgaaagg acggccccag atggcaccgc ggcgcaagaa
     1981 agtctatgaa ggcaaggcca agatccttta cgaaggcacc gagccgggca cgctggtcca
     2041 gtatttcaag gacgacgcca ccgccttcaa cgcccagaag cgcgccacca tcgagggcaa
     2101 gggcgtgctg aacaaccgtc tgtctgaatt cttcatgaac gggttgacca atatcggtgt
     2161 gccaaaccac ttcatccgcc gcatcaacat gcgcgagcag ctgatccgcc aggtcgagat
     2221 cgtgccgctg gaggtgatcg tgcgcaattt cgccgcgggc tcgctgtcca agcggctggg
     2281 cctggaagag ggcaccctgc tgccgcgccc gatcgtcgaa tacagcttca agaacgacga
     2341 actgggcgat ccgatggttt ccgaggaata tatcatcgct ttcggctggg ccacgcaaca
     2401 ggatctggac gacatcgtca gcctggccct gcgggtgaac gatttcctgt ctggggtctt
     2461 ctacggcgtc ggcatcaagc tgatcgattt caagatcgag atcggccggg tctgggacaa
     2521 cgatttcatg cgcctgatcg tcgccgacga gatcagcccc gattcgtgcc gcctgtggga
     2581 cgtgaaaacc gggcagaaac tggacaagga cgtgttccgc cgcgatctgg gcaatctgac
     2641 cgatgcctat accgaggtcg ccc
//
LOCUS       DTVW01000615            1362 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1754076, whole
            genome shotgun sequence.
ACCESSION   DTVW01000615 DTVW01000000
VERSION     DTVW01000615.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1362)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1362)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1362
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1754076"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..592)
                     /locus_tag="EYO87_08105"
     CDS             complement(<1..592)
                     /locus_tag="EYO87_08105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015923038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65945.1"
                     /translation="MQGMSERAYAAHAGLSRGAIQKARKSGRLVLFADGSIDATASDA
                     RRAATTDPDQQGRSRAGAPRQTTSPTPQDRPTRPVDNLAAPSISGPGDSSSYLKARTA
                     LTVYQAQERQIAIQKKKGVLVDRARAEMLVFRLARQERDAWVTWPARVAAIMAAELSA
                     EMEKITGEAASIGTGVLQRVLEAHVRDQLAALADLKV"
     gene            681..944
                     /locus_tag="EYO87_08110"
     CDS             681..944
                     /locus_tag="EYO87_08110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011909766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65946.1"
                     /translation="MLHQRNAAPETDMTRQTARTNDAALAAFIAKKAEVDAMLARLQD
                     FSQDHFGADPERLNWGDVGNLEYQAHLLKQISDFAFREGERVA"
     gene            1039..>1362
                     /locus_tag="EYO87_08115"
     CDS             1039..>1362
                     /locus_tag="EYO87_08115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65947.1"
                     /translation="MTKLTNTQTLILTSASARPGNLALPLPEGLHGAAAKMAIGRMVK
                     LGFIEEVEANLRRNEPLWRETGDGHGTTLIATEAGLDAIGIDPVVSRAVGSVRKAKAE
                     PASSTA"
BASE COUNT          229 a          461 c          450 g          222 t
ORIGIN      
        1 aaaccttgag atcggcgagg gcggcaagct ggtctcggac atgggcttcc agcaccctct
       61 gcagcacccc ggtgccgatg ctcgctgctt ctccggtgat cttttccatc tcggccgaga
      121 gctccgccgc catgatcgcg gcgacacggg cgggccatgt cacccaggca tcgcgttcct
      181 gccgcgccag ccggaagacc agcatctcgg cccgggcgcg gtcgaccagc acgcccttct
      241 tcttctgaat ggcgatctgg cgttcctgcg cctgatagac cgtcagcgcc gtccgggcct
      301 tcagatagga ggacgaatcg cccgggccgg agatcgacgg ggcggcgagg ttgtcgacgg
      361 ggcgcgttgg tcggtcctgt ggtgttggtg acgtcgtctg ccggggcgca ccggccctcg
      421 accgcccctg ctgatccggg tccgtcgtgg ccgcgcgccg ggcatcggag gcggtcgcat
      481 cgatggaacc gtcggcgaag aggaccagcc tgccgctctt gcgcgccttc tggatcgccc
      541 cgcgcgacag cccggcatgg gccgcatagg cccgttcgct catgccctgc atgaaaaacc
      601 cgtccgaaga tgatggtgat gtgcatcaga aagcactgtt attgctccga attctctaca
      661 cttcagggcg cgtcggagcg atgctgcatc aacgaaacgc tgcaccagag accgatatga
      721 cccgccagac cgcccgcacc aatgatgccg ccctcgccgc cttcatcgcg aaaaaggccg
      781 aagtcgacgc gatgctggcc cggctgcagg acttcagcca agaccatttc ggggcagacc
      841 cggagcggtt gaattggggc gatgtcggca acctcgagta tcaggcccac ctgctgaagc
      901 agatcagtga cttcgccttc cgcgagggcg agcgcgtcgc ctgactggtt ggcctgcgcc
      961 gaccgccgcg ccccggttgg cggggcttgc tccgtagaag ccagccgcag cctgcggcgg
     1021 tgatgaacgg agcctgccat gacgaaactc accaacaccc agaccctgat cctgaccagc
     1081 gccagcgccc ggccgggcaa tctcgccctg ccgctgcccg aggggttgca cggcgcggcc
     1141 gcgaagatgg ccatcggccg gatggtaaag cttggcttca ttgaggaggt cgaggccaat
     1201 ctccggcgga acgagccgct ctggcgcgag accggggacg gtcacggcac cacgctgatc
     1261 gccaccgagg ccggtctgga cgctattggg atcgacccgg tggtctcccg cgctgtcggc
     1321 agtgtacgca aggcgaaggc ggaaccggcc tcgtcgacag ca
//
LOCUS       DTVW01000616            4989 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1756512, whole
            genome shotgun sequence.
ACCESSION   DTVW01000616 DTVW01000000
VERSION     DTVW01000616.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 4989)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4989)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4989
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1756512"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..873)
                     /locus_tag="EYO87_08120"
     CDS             complement(<1..873)
                     /locus_tag="EYO87_08120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009451091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acetyltransferase"
                     /protein_id="HIC65948.1"
                     /translation="MTDAAKTDATPPLLDRLRAAARARPRHIILPEGHDPRVAEAALR
                     LTEAGLARITLMNGPGIAGVTALDPAAAPDLVELSTHWHRMRAAKGMTAERALAEMRD
                     PIRQAAMRVRLGQADGTLGGAVATTAETVRAALQIIGRAPDAAIVSSFFLMIPPAETA
                     APDAMIFADCGLVIAPDATGLAAIARASARSCRQLLGQAPRVALLSFSTAGSAEHDSL
                     ERIREALALVRAAEPDLEIDGEMQFDAALDPAIRARKAPKSRLTGPANVVVFPDLASG
                     NIGYKIAQRLGRCHA"
     gene            complement(1061..2035)
                     /locus_tag="EYO87_08125"
     CDS             complement(1061..2035)
                     /locus_tag="EYO87_08125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010396021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative sulfate exporter family transporter"
                     /protein_id="HIC65949.1"
                     /translation="MFPGFAVSVLVAVTAQFLSDRYGAPAMLLALLLGLALNFLADEG
                     TRTAPGIGFTARTVLRLGVALLGARISVEMLAALGGPAIALVVAGVILTIGFALIASR
                     FVGRSWRFALLTGGSVAICGASAAMAIAAVLPRHEKSERDLVFTVLCVTVLSTVAMIL
                     YPMLAQLFQFGARDSGVFLGGTIHDVAQVVGAGFSIGPEAGETATLVKLIRVSMLAPV
                     VLCFSLVIRQKGLAELSEGRRPPLLPGFVVGFLVLAALNSLGLIPQVLADGAGALSRW
                     ALLIAIAAVGIKTSLKRMFEVGPGAIALMVAETVFLGVFIVSGLHWIA"
     gene            complement(2166..3944)
                     /gene="xsc"
                     /locus_tag="EYO87_08130"
     CDS             complement(2166..3944)
                     /gene="xsc"
                     /locus_tag="EYO87_08130"
                     /EC_number="2.3.3.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_345194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfoacetaldehyde acetyltransferase"
                     /protein_id="HIC65950.1"
                     /translation="MRMTTEEAFVKVLQLHGIEHAFGIIGSAMMPVSDLFPRAGITFW
                     DCAHETNAGLMADGFTRSTGRMSMAIAQNGPGVTGFATPVKTAYWNHTPLLLVTPQAA
                     NRTIGQGGFQEMEQMRLFADCVCYQEEVRDPSRIPEVLNRVIMQAWRNSAPAQMNIPR
                     DFWTQVIDVDLPQVVAFERPAGGERAVGEAAALLSAARFPVILSGAGVVLSGAIPDLV
                     RLAERLDAPVCSNYQHNDSFPGSHPLAMGPLGYNGSKAGMEIIARADVVLALGTRLNP
                     FSTLPGYGIDYWPKDAKIIQVDINADRIGLTKKVTVGIQGDAGKVARGILAQLADDAG
                     DAGRQERRDLVAQTKSRWAQELSSLDHEDDDPGTEWNAGARRRDADLMSPRQAWRAIM
                     QAMPQDAIVSSDIGNNCAIGNAYPTFEAGRKYLAPGLFGPCGYGFPAILGAKIGNPDV
                     PVIGFAGDGAFGISMNEMTACGRDDWPAITMVIFRNYQWGAEKRNTTLWYDNNFVGTE
                     LDRDTSYAGIAQACGVTGVQVKSQEDLTRALHEAVEAQMRGETTFIEVILNQELGEPF
                     RRDAMKKPVPVAGIDAADMRPQKGAA"
     gene            complement(3976..>4989)
                     /locus_tag="EYO87_08135"
     CDS             complement(3976..>4989)
                     /locus_tag="EYO87_08135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007811222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="choline dehydrogenase"
                     /protein_id="HIC65951.1"
                     /translation="CSAAVAYIHPIRKRPNLRIITRAATRRVVIEDGRAVAVEYADRS
                     GKTQRIEVKGEVILSAGAIGSPQILMLSGVGEAAHLAEHGIPVAADLPGVGQGLQDHL
                     QARLIYTCNEPTLNDEVRKLWQQARIALKYAMFRAGPMSMAASLATGFMRTNDRVATP
                     DIQFHVQPWSADSPSQGVHPFSAFTMSVCQLRPESRGSIRLKSADPSVYPAIHPNYLA
                     TETDCQTIVDGVRIARRIAAERPLSGKITGEMRPGPEVRDDAALLDWVRNSATTIFHP
                     TGTAAMGPVLDDRLRVKGIRGLRVADCSIMPEIVSGNTNAPAIMIGEKAADLLREDRR
                     RGA"
BASE COUNT          793 a         1748 c         1727 g          721 t
ORIGIN      
        1 ggcgtggcag cggccgaggc gctgggcgat cttgtagccg atattgcccg aggcgaggtc
       61 ggggaagacg acgacattgg ccgggccggt caggcggctt ttcggggcct tgcgggcgcg
      121 gattgcgggg tcgagggcgg cgtcgaactg catctcgccg tcgatttcca ggtccggttc
      181 ggccgcgcgg accagcgcca gcgcctcgcg gatccgctcc aggctgtcat gttcggccga
      241 gccggcggtc gagaaggaca gcagcgccac ccgcggggcc tggcccagca gctgccggca
      301 ggaccgggcc gaggcgcggg cgatggcggc cagtccggtg gcatcggggg cgatgacgag
      361 gccgcaatcg gcgaagatca tcgcatccgg cgccgccgtt tccgcgggcg ggatcatcag
      421 gaagaagctg gacacgatgg ccgcgtcggg ggcccggccg atgatctgca gcgccgcgcg
      481 caccgtctcg gcggtggtgg cgaccgcgcc gcccagggtg ccgtcggcct ggcccaggcg
      541 cacccgcatc gccgcctgcc ggatcgggtc gcgcatctcg gccagcgcgc gttcggcggt
      601 catgcctttc gcggcccgca tccggtgcca atgggtcgac aattcgacca ggtccggcgc
      661 cgcggccggg tccagcgcgg tgacgccggc aatcccgggc ccgttcatca gcgtgatccg
      721 ggccagcccc gcctcggtga ggcgaagggc ggcctcggcc acgcgggggt catggccctc
      781 gggcaggatg atgtggcggg gccgggcgcg ggcggccgcg cgcaggcggt cgagaagcgg
      841 cggcgtggcg tcggtcttgg cggcatcggt catcggcctg atccttccgg cggcggggcc
      901 ggggcaaccg gcgcgggggg gacgctgccc ccggccctgc ggactgcccc gggataccgg
      961 acgacccggg cggggcgggg ggcggcaaag gcggggcggg gggcggcggg acgggcggcg
     1021 gcagggcggg cggcggcagg gcggggggcg gcgcgcatgc tcaggcgatc cagtgcaggc
     1081 cggagacgat gaagacgccc aggaagacgg tctccgcgac catcagcgcg atggcgccgg
     1141 ggccgacctc gaacatgcgt ttcagcgagg tcttgatgcc gaccgccgcg atcgcgatca
     1201 agagcgccca gcggctgagc gcgccggccc cgtcggccag gacctgcggg atcaggccca
     1261 gcgagttcag cgccgccagc accagaaagc ccaccacgaa gcccggcagc agcggcgggc
     1321 gccggccctc ggacagttcg gccaggccct tctgccggat caccagcgaa aagcacagca
     1381 ccaccggcgc cagcatcgac acccggatca gcttgaccag ggtcgcggtc tcgccggcct
     1441 cggggccgat ggaaaagccg gcgccgacca cctgcgccac gtcatggatc gtgccgccca
     1501 ggaagacgcc cgaatcgcgg gcgccgaact ggaacagctg cgccagcatc ggatagagga
     1561 tcatcgccac cgtcgacagc acggtcacgc aaagcaccgt gaagaccagg tcgcgttcgg
     1621 atttctcgtg gcgcggcagc accgccgcga tggccatcgc cgccgaggcc ccgcagatcg
     1681 ccaccgagcc cccggtcagc agcgcaaagc gccagctgcg cccgacgaag cggctggcga
     1741 tgagcgcgaa gccgatggtc aggatcaccc ccgccacgac cagcgcgatg gccggcccgc
     1801 caagcgccgc cagcatctcg acgctgatcc gcgcccccag cagcgccacc cccagccgca
     1861 gcaccgtgcg cgcggtgaag ccgatccccg gcgccgtccg cgtgccctca tcggccagga
     1921 agttcagcgc caggcccaga agcagcgcca gcagcatggc cggcgcgccg taacggtcgg
     1981 acaggaactg cgcggtgacg gcgacgagga ccgaaacggc aaagcccgga aacatcgggc
     2041 gcagcgcatc gcccccgccc aggcgggtcg agagccgcgc ggcaagcgag gtcatgatct
     2101 tctcctgcaa ggcaaggcaa ggcgtgaccg gcccggcgcc gacgggccgg gccgggtcgt
     2161 cgggatcagg ccgcaccctt ctgcgggcgc atgtcggcgg cgtcgatgcc ggccaccggc
     2221 accggcttct tcatcgcgtc gcggcggaag ggctcgccca gttcctggtt caggatcacc
     2281 tcgatgaagg tcgtctcgcc ccgcatctgc gcctcgaccg cctcgtgcag cgcccgggtc
     2341 aggtcctcct ggcttttcac ctgcacgccg gtcacgccgc aggcctgggc gatcccggca
     2401 taggaggtgt cgcggtccag ttcggtgccc acgaagttgt tgtcatacca cagcgtcgtg
     2461 ttgcgctttt ccgcgcccca ttggtagttg cggaagatca ccatggtgat cgccggccag
     2521 tcgtcgcggc cgcaggcggt catctcgttc atggaaatcc cgaaggcgcc gtcgccggca
     2581 aagccgatca ccggcacgtc cggattgccg atcttggcgc ccaggatcgc cggaaagccg
     2641 tagccgcagg gaccgaacag gcccggcgcc aggtatttgc ggcccgcctc gaaggtcgga
     2701 taggcattgc cgatggcgca gttgttgccg atgtcggaac tgacgatcgc atcctgcggc
     2761 atcgcctgca tgatcgcccg ccaggcctga cgcgggctca tcaggtcggc gtcgcggcgg
     2821 cgcgcgcccg cgttccattc ggtgcccgga tcgtcatcct cgtgatccag gctcgacaat
     2881 tcctgcgccc agcgggattt cgtctgcgcc accagatcgc ggcgctcctg ccggccggca
     2941 tcgcccgcat catccgcaag ctgcgccagg atcccgcgcg ccaccttgcc cgcgtcgccc
     3001 tggatgccca ccgtcacctt cttggtcaga ccgatccggt cggcattgat gtcgacctgg
     3061 atgatcttcg catccttcgg ccagtaatcg atgccgtagc ccggcagcgt cgagaacggg
     3121 ttcagccggg tgccaagcgc cagcaccaca tccgccctgg cgatgatctc catcccggcc
     3181 ttgctgccat tatagcccag cggacccatc gccagcggat ggctgcccgg gaagctgtca
     3241 ttgtgctggt agttggaaca gaccggcgca tccagacgct cggccagcct gaccaggtcg
     3301 gggatcgccc ccgacaggac cacgcccgcc cccgacagga tcaccgggaa ccgggccgcg
     3361 ctcagcagcg ccgcggcctc gccgaccgcc cgttccccgc ccgcgggacg ttcgaacgcc
     3421 accacctgcg gcagatcgac gtcgatcacc tgggtccaga aatcgcgcgg gatgttcatc
     3481 tgcgccggcg ccgaattgcg ccaggcctgc atgatcaccc ggttcagcac ctcggggatg
     3541 cgcgagggat cgcgcacctc ctcctggtag cagacgcaat cggcaaacag ccgcatctgc
     3601 tccatctcct ggaaaccgcc ctgcccgatg gtcctgttcg ccgcctgcgg cgtcaccagc
     3661 agcagcggcg tgtggttcca gtaggccgtc ttcaccggcg tcgcaaaacc cgtcaccccc
     3721 ggaccgttct gcgcgatcgc catcgacatc ctgcccgtcg agcgcgtgaa cccgtccgcc
     3781 atcagacccg cattcgtctc gtgcgcgcaa tcccagaagg tgatcccggc ccgcggaaaa
     3841 agatcgctca caggcatcat cgcagaaccg atgatcccaa aagcatgctc gatcccatgc
     3901 aactgcaaaa ccttgacaaa cgcctcttca gtcgtcatcc tcatggctca aaactccctt
     3961 tcccggagat tgtggtcagg ccccgcgcct gcgatcctcg cgcaggagat cggcggcctt
     4021 ttcgccgatc atgatcgcgg gggcattggt gttgcccgag acgatctcgg gcatgatcga
     4081 gcaatcggcg acgcgcaggc cgcgaatgcc cttgacccgc agacggtcgt ccagcaccgg
     4141 ccccatcgcg gcggtgccgg tcggatgaaa gatcgtcgtg gccgaattgc gcacccagtc
     4201 cagcagcgcg gcatcgtccc ggacctcggg gccggggcgc atctcgccgg tgatcttgcc
     4261 cgacagcggg cgctctgcgg cgatccggcg ggcgatcctg accccgtcga cgatggtttg
     4321 gcaatcggtt tcggtcgcca ggtaattcgg gtgaatggcg ggatagaccg acggatcggc
     4381 cgatttcagc cggatgctgc cgcgactttc ggggcgcaac tggcagaccg acatggtgaa
     4441 ggccgaaaac ggatgcacgc cctgggacgg gctgtcggcg gaccagggct ggacatggaa
     4501 ctggatatcg ggggtcgcga cgcgatcgtt ggtgcgcatg aacccggtgg cgaggctggc
     4561 cgccatgctc atcgggccgg cgcggaacat ggcgtatttc agcgcgattc gggcctgttg
     4621 ccacagcttg cgaacctcgt cgttcagcgt gggttcattg caggtataga tcagccgggc
     4681 ctgaagatgg tcctgaaggc cctgtcccac gcccggcaga tcggcggcga cgggaatgcc
     4741 gtgttcggcc agatgcgcgg cttcgcccac gcccgaaagc atcaggatct gcgggctgcc
     4801 gatggcgccg gcggacagga tcacctcgcc cttcacctcg atgcgctgcg tcttgcccga
     4861 gcggtcggca tattcgaccg ccaccgcgcg cccgtcctct atcaccacgc gacgggtcgc
     4921 ggcgcgggtg atgatgcgca gattggggcg cttgcggatc ggatggatat aggccacggc
     4981 ggccgagca
//
LOCUS       DTVW01000617            1246 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1757189, whole
            genome shotgun sequence.
ACCESSION   DTVW01000617 DTVW01000000
VERSION     DTVW01000617.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1246)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1246)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1246
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1757189"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(95..>1246)
                     /locus_tag="EYO87_08140"
     CDS             complement(95..>1246)
                     /locus_tag="EYO87_08140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005613201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase large subunit"
                     /protein_id="HIC65952.1"
                     /translation="DAGSFAADAMTALAVAQSKPGKVATLIAPADIGWDAGGNMAAPV
                     ATAGPAPLDETALDAAVTALESGERTVIIAGLSVLEDVSALARLQGIAERTGADVLAP
                     TSNRRMERGRGRFAIGKIPYPIDAALHCLAGYSRAILVETRPPVAFFAYPGKPSLLLP
                     ETCDTLTLAGIDGDGPAAIAALADRIGARPVTARDIEPAPVPQAGAITPVTIAAVLAE
                     TLPEGAIVIDEAVSSSGDIFPGGAAAAPHSWLALTGGSIGIGIPLSAGAAIACPDRPV
                     LTLQADGSAMYTLQGLWTQAREGANVTTVILANRAYAILKGELHNVGAQPGPDALGML
                     NLDRPGLDFVAMARGMGVPGRRVEDIREFRRALRNAMAEPGPFLIEAMI"
BASE COUNT          186 a          439 c          438 g          183 t
ORIGIN      
        1 gacctgatcg tcgaacccgt cggaaacggc ctgcaggata cggtcgcgca gattggcgtc
       61 gagaggcatg gaattccctt ttccggttgc tggctcagat catcgcttcg atcaggaacg
      121 ggccgggctc ggccatggca ttgcgcaggg cccgccggaa ttcgcgaatg tcctcgaccc
      181 gtcggcccgg cacgcccatg ccgcgcgcca tggccacgaa atccagcccc ggccggtcca
      241 ggttcagcat cccgagcgcg tcgggaccgg gctgcgcgcc gacattgtgc aattcgccct
      301 tgaggatcgc gtaggcgcgg ttggccagga tcacggtggt cacgttcgcc ccctcgcgcg
      361 cctgggtcca cagcccttgc agggtgtaca tcgccgagcc gtccgcctgc aatgtcagca
      421 ccggacggtc gggacaggcg atcgcggcgc ccgccgacag cgggatgccg atgccgatcg
      481 agccgccggt cagagccagc caggaatggg gcgcggcggc agcgccgccg ggaaagatgt
      541 cgccgctgct ggacacggcc tcgtcgatga cgatggcacc ttcgggcagg gtctctgcca
      601 gcacggcggc gatggtgacg ggggtgatgg ccccggcctg cggcaccggc gccggctcga
      661 tatcgcgcgc cgtgacgggc cgggcgccga tgcggtcggc cagcgccgca atggcggccg
      721 gcccatcgcc gtcgatcccc gccagggtaa gcgtgtcgca ggtttcgggc agcagcaggc
      781 tgggcttgcc cggataggcg aaaaaggcca cgggcgggcg ggtttccacc aggatcgccc
      841 gcgaatagcc cgcaaggcag tgcagcgccg cgtcgatcgg ataggggatc ttgccgatgg
      901 cgaaccgccc gcgaccgcgt tccatccgcc ggttcgaggt gggggcaaga acatcggccc
      961 cggtcctttc ggcgatgccc tgcagtcgcg ccagcgccga gacatcctcc agcaccgaca
     1021 accccgcgat gatcaccgtt ctttcgccgc tttccagcgc ggtcacggcg gcatccagcg
     1081 ccgtctcgtc cagcggggca gggccggcgg tcgccaccgg ggccgccata ttgccgcccg
     1141 cgtcccagcc gatgtccgca ggggcgatca gtgtggcgac cttgccgggc ttgctctgcg
     1201 ccacggcgag cgcggtcatc gcatccgccg caaagctgcc cgcatc
//
LOCUS       DTVW01000618            1356 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_175802, whole
            genome shotgun sequence.
ACCESSION   DTVW01000618 DTVW01000000
VERSION     DTVW01000618.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1356)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1356)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1356
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_175802"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
BASE COUNT          458 a          206 c          276 g          416 t
ORIGIN      
        1 atggtgatgg ttctgctggt gagtttataa aaactgatgg ttctggtaat ttaggatttg
       61 cagttgttga ccaagcttta gatttagcag gtgatactgg aacagatact tataatacaa
      121 gtgaaacatt aactttcgct ggtggcacag gtatggaagc agtagttact gataatacgg
      181 taactataaa tgcaacagca ttaacagatt caaatttatc tggtagtgca ggtatagcaa
      241 atgataaatt agcaaatcct actacaacat taggatcatc tactttaact ttaggtcaaa
      301 cagaaacaga tttagcagga ttaacttctt tagtaattga tgacattaca attgacggtc
      361 aatcatttac aactacagcc gcaaataaaa atattaatat ttcaccacac ggaacaggtt
      421 caataattgt tcctagtgga tatgaagata gagcaggatt tcaaactcaa tcacttgcaa
      481 ataaagctta tgttgaccaa gttgctcaag gtttagatac taaaccttct tgtagattgg
      541 cgacaattgc tgatttatca gcaacttata ataatggaac attaggtgtt ggtgcaactt
      601 taacagcaac ttcaggtggt gcattatcaa ttgatagtgt aacgccaaat gttgcagata
      661 gaattttagt taaagaccaa acagacgcaa gtgaaaatgg aatttatgta gttacaacta
      721 taggtgatgg atcaactgct tttgtattaa caagagcaac tccagaagac caaccagctg
      781 aattaactgg tggttcattt gtatttgtag aagaaggtac tattggttct aacaatggat
      841 atacatttac acatacaggt gctccaacat ttggaacaac tgatttagac gtttctcaat
      901 tttctggtgc aggtcaaatt actgcaggtg ccgctttatc aaaagatggt aatacaatag
      961 atgtagaagt tgatgatagt tcagttgaag tttcaggtga cgcattaaga gttaaagcat
     1021 taggtataac aaatgctatg ttgacaggtt caattgcaag tgataaactt tctgatcctt
     1081 tatattttgc agacgaatct tcatcacaag gatccgtaag agttggtgga gttttagaat
     1141 ttttagcagg tgaaggaatc aatactattg ctactggcaa taaattacaa attgttggtg
     1201 aattagcaag tacatcaaac ataggagttg cgtctttttc tactgataat tttacagtta
     1261 ctgccacaga tgcagaagga caaacagcag ctagagcttt tagtatgact tggagcttta
     1321 caatgcaagg aggaggacag tttaactaat ggctac
//
LOCUS       DTVW01000619            1345 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1758079, whole
            genome shotgun sequence.
ACCESSION   DTVW01000619 DTVW01000000
VERSION     DTVW01000619.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1345)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1345)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1345
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1758079"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1345)
                     /locus_tag="EYO87_08145"
     CDS             complement(<1..>1345)
                     /locus_tag="EYO87_08145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010394455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="RNA-binding transcriptional accessory protein"
                     /protein_id="HIC65953.1"
                     /translation="SAPTPRLRSQSARTRATVPFVARYRKEVTGGLDDSQLRTFAERL
                     VYLRELDSRRRTILAAIRDQDRLTDDLARAIAGAETKAALEDIYLPFKPRRRTKAMIA
                     REKGLEPLLRAIRDDRAADPAELAAAHVSDAVPDQKAALDGARDILVEELSENAALLG
                     ALRDFMRAEAVVAARVIAGREQAGAKFSDYFDHRETWAGIAAHRALAILRAAKEEIVT
                     IDIAPDSEDGSARAEGIVAQALGPLGEGPGDRWLRQVAGWTWRIRLSNTMYIDLLTEL
                     RKRAHDEAIRVFGRNLRDLLLAAPAGPRATIGLDPGIRTGVKVAVVDGTGKLVETTTI
                     YPFQPRNDLRGAESALAALIARHGVELIAIGNGTASRETERLVGDLLKRLPRGARAPT
                     KVIVSEAGASVYSASELAAREFPDLDVSLRGAVSIARRLQDPLAELVKVPPESIGV"
BASE COUNT          205 a          485 c          431 g          224 t
ORIGIN      
        1 gacgccgatg ctttcgggcg gcaccttgac cagttcggcc agcggatcct gcaggcggcg
       61 cgcaatcgac accgcgcccc gcaatgacac atcgagatcc ggaaattccc ttgccgccag
      121 ttccgaggcg gaatagaccg atgccccggc ctcggagacg atgaccttgg tgggcgccct
      181 tgcgcccctt ggcagccgtt tcagcagatc gcccaccaga cgctcggtct cgcggctggc
      241 ggtgccgttg ccgatggcga tcaattccac gccgtggcgc gcgatcagcg ccgccagcgc
      301 cgattcggcg ccgcgcaggt cattcctggg ctggaaggga tagatcgtcg tcgtttcgac
      361 cagcttgccg gtgccatcga ccactgccac cttgaccccg gtgcgtatgc cgggatccag
      421 gccgatcgtc gcgcgcggcc cggcaggggc ggccagcaac agatccctga gattgcggcc
      481 aaagacgcgg atcgcctcgt catgggcgcg tttgcgcaat tccgtcagca ggtcgatata
      541 catcgtgttc gacagccgga tgcgccatgt ccagcccgcc acctgccgca gccaccgatc
      601 gcccggcccc tcgcccagcg gcccaagcgc ctgcgccacg atcccttcgg cccgcgccga
      661 cccgtcttcg gaatcgggcg cgatgtcgat ggtcacgatc tcttccttcg cggcgcgaag
      721 gattgccagc gcacgatgcg ccgcgatccc ggcccatgtc tcgcgatggt cgaaataatc
      781 gctgaacttg gccccggcct gttccctgcc ggcaatcacc ctggccgcga ccacggcctc
      841 ggcccgcatg aaatcgcgca aggcccccag aagtgccgcg ttttcagaaa gttcctcgac
      901 cagaatgtcg cgggcaccgt ccagggcggc cttctgatcg ggcactgcat cgctgacatg
      961 ggccgccgcc agctccgccg gatcggcggc gcggtcgtcg cgaatggcgc gcagcagcgg
     1021 ttccagcccc ttctctcggg cgatcatcgc cttggtccgg cgcctgggct tgaagggcag
     1081 atagatgtct tccagcgccg ccttggtctc ggccccggcg atggcgcggg ccagatcgtc
     1141 ggtcagcctg tcctgatcgc ggatcgcggc caggatcgtc cgccgccgcg agtccagttc
     1201 gcgaaggtag accagacgtt cggcaaaggt gcgcaactgg ctgtcgtcca gcccgcccgt
     1261 cacctccttg cgatagcggg cgacgaaggg cacggtcgcg cgcgtccggg cgctctgcga
     1321 ccgcaatcgc ggcgtaggcg ctgac
//
LOCUS       DTVW01000620            1755 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1758526, whole
            genome shotgun sequence.
ACCESSION   DTVW01000620 DTVW01000000
VERSION     DTVW01000620.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1755)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1755)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1755
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1758526"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..351)
                     /locus_tag="EYO87_08150"
     CDS             complement(<1..351)
                     /locus_tag="EYO87_08150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009158656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfopyruvate decarboxylase subunit alpha"
                     /protein_id="HIC65954.1"
                     /translation="MTIHRQIVDDFTAHGIDFVTTVPCKQLAGVIDEIENRKEIFHIP
                     SNKEDEGMGLCAGAFMGGKRPAIIMQNTALGVTLNTLATLIQFYRMPLPMLISYRGEL
                     GEPVACQVEMAVHTK"
     gene            complement(348..1364)
                     /locus_tag="EYO87_08155"
     CDS             complement(348..1364)
                     /locus_tag="EYO87_08155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013960604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactitol-1-phosphate 5-dehydrogenase"
                     /protein_id="HIC65955.1"
                     /translation="MKALVYTGVETLDYADAPRPRPGESEDLIRIHASGICGSDMHAY
                     LGHDDRRPAPLVLGHEAAGIVLGGPDDGRRVTINPLVTCQTCEACQAGRTNLCPRRQI
                     ISMPPRPGAFADYVAMPRRNLVTVPDDVPLEKAALAEPLACGWHAVRLAGRALDRPLD
                     DLRTLVIGGGAIGTGAALALRAQGAANITLIEPGELRRARLAGLKGVTVIASAADRPD
                     LTGACHLVIDGVGFEATRATACAAARPGGQIVHIGLGADRGGLDIRRMTLQEIGFTGT
                     YTYTEQDFRDTAEAIFSGALGPLDWFDRRPLSDGPQAFADIRAGRAAAPKILLIPDQE
                     DRTA"
     gene            complement(1361..>1755)
                     /locus_tag="EYO87_08160"
     CDS             complement(1361..>1755)
                     /locus_tag="EYO87_08160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011569884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HIC65956.1"
                     /translation="LAQAMVPAMARRGWGRIVNFASLQSRRAFAGGISYGASKGGVEQ
                     LTRAMAEAWSGRGIMVNAVAPGFFRTELTGPVFADPERARRNAEQTCIGRNGEPADLD
                     GPILFLCSDASGYVTGQTLFVDGGFSAK"
BASE COUNT          279 a          577 c          619 g          280 t
ORIGIN      
        1 cttggtatgg acggccatct cgacctgaca ggccaccggt tcgcccaact cgccacggta
       61 ggagatcagc atcggcaacg gcatccggta gaactggatc agcgtggcca gcgtgttcag
      121 tgtcacccca agcgcggtgt tctgcatgat gatcgccggg cgcttgccgc ccatgaaggc
      181 cccggcgcaa aggcccatcc cctcgtcctc cttgttcgac gggatatgga aaatctcctt
      241 gcggttctcg atctcgtcga tgacaccggc aagctgcttg cagggcacgg tggtcacgaa
      301 atcgattcca tgtgctgtga aatcgtcaac gatctggcgg tgtatcgtca tgcggtgcgg
      361 tcctcctggt cgggaatgag taggatcttg ggtgctgcgg cgcggccggc gcggatatcg
      421 gcaaaggctt gcggcccgtc cgacagcggc cgccggtcga accagtcgag cggccccagg
      481 gcgccggaaa agattgcctc ggcggtgtcg cggaaatcct gttcggtata ggtataggtg
      541 ccggtaaaac cgatttcctg caaggtcatc cggcgaatgt ccagcccgcc gcgatccgcg
      601 ccaagaccga tatggacgat ctggccgccg gggcgtgcgg ccgcgcaggc ggtggcgcgg
      661 gtggcttcga aacccacccc gtcgatgacg aggtggcagg cgccggtcag gtcggggcgg
      721 tcggcggccg aggcgatgac ggtgacaccc ttcaggccgg ccagccgcgc gcggcgcaat
      781 tcgccgggtt cgatcagggt gatgttcgcg gcgccctgcg cgcgcagggc cagcgccgcg
      841 ccggtgccga tggcgccccc gccgatgacc agcgtgcgca gatcgtccag cggccggtcc
      901 agcgcccgtc cggccagccg caccgcgtgc cagccgcagg ccagcggttc agccagcgcg
      961 gccttttcga gcggcacatc gtccggcacg gtgaccaggt tgcggcgcgg catcgcgacg
     1021 taatcggcga aggcgcccgg tcgcggcggc atcgagatga tctgccgccg cggacaaaga
     1081 ttggtgcgcc ccgcctggca agcctcgcag gtctggcagg tcacgagggg gttgatggtg
     1141 acgcggcggc cgtcatcggg gccgcccagg acgatgcccg cggcctcgtg gcccagaacc
     1201 agcggcgccg ggcgccggtc gtcatggccc agataggcgt gcatgtccga tccgcagatg
     1261 cccgaggcat ggatgcggat caggtcctcg ctctcgcccg gtcgggggcg cggcgcatcg
     1321 gcatagtcga gggtttcgac gccggtatag accagggcct tcatttcgcg ctgaatcctc
     1381 catcgacgaa cagggtctgg ccggtgacat agccgctggc atcgctgcac agaaacagga
     1441 tcgggccgtc cagatcggcg ggttctccgt tgcggccgat acaggtctgt tcggcattgc
     1501 gccgcgcgcg ttcgggatcg gcgaagaccg gcccggtcaa ttcggtgcga aagaaccccg
     1561 gcgccacggc attgaccatg atgccgcggc ccgaccaggc ctcggccatg gcgcgggtca
     1621 attgttcgac accgcccttg ctggcgccgt agctgatgcc gccggcgaag gcgcgccgcg
     1681 attgcagcga ggcgaagttg acgatccggc cccagccgcg ccgcgccatc gcgggcacca
     1741 tcgcctgggc cagaa
//
LOCUS       DTVW01000621            1094 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1758949, whole
            genome shotgun sequence.
ACCESSION   DTVW01000621 DTVW01000000
VERSION     DTVW01000621.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1094)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1094)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1094
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1758949"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..111
                     /locus_tag="EYO87_08165"
     CDS             <1..111
                     /locus_tag="EYO87_08165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019954520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit C"
                     /protein_id="HIC65957.1"
                     /translation="PSAAAGQTATLFIGIAFAEALGIFAFLVSLLLMFAV"
     gene            186..806
                     /locus_tag="EYO87_08170"
     CDS             186..806
                     /locus_tag="EYO87_08170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011749152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B'"
                     /protein_id="HIC65958.1"
                     /translation="MISLLQEAATTVVEQSQGAAAASEHGGATAQAAAAAGEASAPGM
                     PQLNFDTFPNQIFWLAISLVVLYWVLSKIALPRIAAVISDRQGAITGDLMAAEEFKQR
                     AKDAEAAYDKALAEARGEAGKIVAANRAEIQKELDAAIAHADAEIAARVSESEKRIRE
                     IRDSAQADARQVAREVTAQLVETFGGQVDQGAVDQAVDNRMERALQ"
     gene            803..>1094
                     /locus_tag="EYO87_08175"
     CDS             803..>1094
                     /locus_tag="EYO87_08175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011749151.1"
                     /note="produces ATP from ADP in the presence of a proton
                     gradient across the membrane; subunit B is part of the
                     membrane proton channel; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP F0F1 synthase subunit B"
                     /protein_id="HIC65959.1"
                     /translation="MKKTGIIAVFAAGAAGPAAAAPGSFFSLGNTDFIVTIAFLIFVG
                     ILIYYKVPTIIGDLLDKRAGGIRRDLDEAKRLREEAQEIYASYERRQREVSGQ"
BASE COUNT          195 a          349 c          365 g          185 t
ORIGIN      
        1 ccgtcggccg cagccggcca gaccgcgacg ctgttcatcg gcatcgcctt cgcggaagct
       61 ctggggatct tcgcgttcct cgtttcgctt ctgctgatgt tcgcggtctg atcccacgcc
      121 atccttgcgg cggggtgagg gccgacgcct tcgccccttc gtgacccgag aggccagggg
      181 gttacatgat aagcctgttg caagaggccg cgacgaccgt ggtcgaacaa tcccaaggcg
      241 ccgcagccgc gtcagagcat ggcggggcaa ctgcgcaagc cgccgcggct gccggcgagg
      301 ctagcgcgcc cggcatgccg cagctgaact tcgacacgtt cccgaaccag atcttctggc
      361 tcgcgatttc gctggtggtg ctgtattggg ttctgtcgaa aatcgcgctg ccccggatcg
      421 cggccgtcat ctcggaccgt cagggcgcga tcaccgggga tctgatggcg gcggaagagt
      481 tcaagcagcg cgccaaggat gccgaggcgg cctatgacaa ggcgctggca gaggcccgcg
      541 gcgaggccgg aaagatcgtc gcggccaacc gcgccgagat ccagaaggaa ctggatgccg
      601 ccatcgccca tgccgatgcg gaaatcgccg cgcgcgtgtc ggaatcggaa aagcgcatcc
      661 gcgagatccg cgattccgcc caggccgatg cccgtcaggt cgcccgcgag gtgaccgcgc
      721 aactggtcga aaccttcggt ggccaggttg atcagggcgc cgtcgatcag gctgtggaca
      781 accgtatgga gagggcgttg caatgaagaa aaccggcatc atcgccgtat ttgcggcagg
      841 cgccgccgga ccggccgccg cggcaccggg gtcgttcttc tcgctcggca ataccgactt
      901 catcgtcacc attgccttcc tgatctttgt cggcatcctg atctactaca aggtgcccac
      961 gatcatcggc gatctgctgg acaagcgcgc cggtggcatc cgcagggatc tggacgaagc
     1021 caagcgtctg cgcgaggaag cgcaggaaat ctatgccagc tatgaacgcc ggcagcgcga
     1081 ggtttcgggg cagg
//
LOCUS       DTVW01000622            1429 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1759693, whole
            genome shotgun sequence.
ACCESSION   DTVW01000622 DTVW01000000
VERSION     DTVW01000622.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1429)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1429)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1429
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1759693"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(142..1365)
                     /locus_tag="EYO87_08180"
     CDS             complement(142..1365)
                     /locus_tag="EYO87_08180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011907586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HIC65960.1"
                     /translation="MKILFVHQNFPGQFPHLSGALARRGHQVLALTDENNERPSPVRT
                     VRYKAPRPVEGGSVLGRTYSTMAERGLLAARGARALRDRHGFSPDLIIGHSGWGETLF
                     LKEIWPQARLLVYAELMYRTQGHDVGFDPEFQSGSDESRFMTVARSAHLIQGIAQADA
                     AIAPTRYQADSFPPDLRGKITVIHDGIDTARVKPDPEAWLQLPGLPRMAAGDEIVSFV
                     SRSLEPYRGFHIFMRALPDLLAARPRARVVIVGGDGVSYGGAPPDARSWKEKMLAELG
                     DRLDLSRVHMVGRLAYPDYLSLIQIARVHCYLTYPFVLSWSLTEAMAAGGYVVASDTA
                     PVRELVRDGENARLVPFFDVQALSAALIRGLEGDRDAARLRQAARQTILDGYDLQRIS
                     LPRQIEWVERQGAMG"
BASE COUNT          255 a          490 c          460 g          224 t
ORIGIN      
        1 gcggtcatag acggtcggcc cgcacagata cagccgcaca ttgcccggat ccagaggcgt
       61 gaaaacctct ttcctgcggg tgcgggtatt ggtcagccgg atctcgacca tgttgcgcct
      121 cttgcctgac tggcgcggga tctagcccat cgccccctgt ctttccaccc attcgatctg
      181 acgcggcagg ctgatgcgct gaagatcgta gccatcaagg atcgtctgcc gcgccgcctg
      241 ccgcagccgt gccgcatcgc gatcgccctc caacccccgg atcagcgcgg ccgacagcgc
      301 ctgcacgtcg aaaaagggca ccagacgggc gttttctccg tcacggacca gttcgcggac
      361 cggcgcggta tccgaggcca cgacatagcc gcccgcagcc atggcctcgg tcagcgacca
      421 ggacagcacg aaaggatagg tcagatagca atgcacccgc gcgatctgga tcagcgacag
      481 gtaatcggga taggccagcc gcccgaccat gtggacgcgg gacagatcca gcctgtcgcc
      541 cagttcggcc agcatcttct ccttccagct tcgcgcgtcc ggcggcgccc ccccgtagct
      601 gaccccatcg ccgccgacga tgacgacccg cgcccgcggc cgcgccgcca gcaggtcggg
      661 cagcgcgcgc atgaagatgt gaaacccgcg atagggctcc agcgatcgcg agacgaagct
      721 gacgatctcg tccccggccg ccatccgggg caggcccggc aattgcagcc atgcctcggg
      781 atcgggcttc acgcgcgcgg tgtcgatgcc gtcatggatc acggtgatct tgccgcgcag
      841 gtccggcgga aagctgtcgg cctgataccg cgtcggcgcg atggccgcat cggcctgcgc
      901 gatgccctgg atcagatgcg ccgaacgggc gacggtcatg aagcggctct cgtcgctgcc
      961 cgattggaat tcgggatcga atccgacatc gtggccctgg gtgcgataca tcagctcggc
     1021 atagaccagc agccgggcct gcggccagat ttccttcaga aacagcgtct ctccccagcc
     1081 cgaatggccg atgatcaggt cgggcgaaaa gccgtgccga tcgcgcagcg cccgcgcgcc
     1141 gcgtgccgcc agaagcccgc gttcggccat cgtcgaatag gtgcggccaa gaacgctgcc
     1201 gccctcgacc ggccgaggcg ccttgtagcg cacggtccgc accgggctgg ggcgttcgtt
     1261 gttttcatcc gtcagcgcca gaacctgatg gccgcgccgg gccagcgcgc ccgacagatg
     1321 cggaaactgg ccggggaaat tctgatggac gaacaggatc ttcatgagcg gtcgggaaag
     1381 gccgccttca gcagcgcgcg ggtataatcg gattgcggat cgtcgaaga
//
LOCUS       DTVW01000623            1463 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1761641, whole
            genome shotgun sequence.
ACCESSION   DTVW01000623 DTVW01000000
VERSION     DTVW01000623.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1463)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1463)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1463
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1761641"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..146)
                     /locus_tag="EYO87_08185"
     CDS             complement(<1..146)
                     /locus_tag="EYO87_08185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease"
                     /protein_id="HIC65961.1"
                     /translation="MRGAILKLADVTGLVARLGLWLAGIGLVLMTAAVFAQVFYRYII
                     GYSL"
     gene            complement(215..1201)
                     /locus_tag="EYO87_08190"
     CDS             complement(215..1201)
                     /locus_tag="EYO87_08190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005857218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HIC65962.1"
                     /translation="MKFLNTTLIGLLASAAFATAGAAAECEITLRSSDTHPDGYPTVE
                     GVKSMASEVKEKSDGRICIEVFPAAQLGEEKDTIEQTQFGVIDMVRASFGTFNDIVPV
                     TQLFSLPYLFRSQDQMHNVLDGPIGEEIAQNFAEKDLIVLGYYDGGARSFYNSQKPIT
                     SIEDLKGMKFRVMQNDVFVDMMSALGANATPMPYGEVYSAIQTGVIDGAENNFPSYDS
                     SGHAEVAKYYTLDEHLMVPELVAMSKLSWEKLSPEDQEIIKTAGKNSVEVERKLWAEQ
                     EKASEEKVVAGGAQIIKDIDKTAFQEAMAPVYEKYVTTPEARDLVRRIQETK"
     gene            complement(1225..>1463)
                     /locus_tag="EYO87_08195"
     CDS             complement(1225..>1463)
                     /locus_tag="EYO87_08195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_353560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glucuronate isomerase"
                     /protein_id="HIC65963.1"
                     /translation="GMRRFRETTTETAGFYNTVGFNDDTRAFCSIPARHDVARRVDCA
                     YLATLVATGRLDGEEAPEVARELAHGLAKRAYRL"
BASE COUNT          259 a          465 c          437 g          302 t
ORIGIN      
        1 aaaaggctgt agccgatgat gtagcgatag aagacctgcg cgaagaccgc cgccgtcatc
       61 aggaccaggc cgatccccgc cagccacaat cccaatcggg ccaccagccc ggtcacgtcg
      121 gccagtttca agattgcacc gcgcatcggg cgatctcctg caagggcaag gggccgcccg
      181 cgcgggatgc gcgggcggcc ggaaggtcac gggatcactt ggtttcctga atgcgccgga
      241 ccagatccct ggcctcgggc gtggtcacgt atttctcgta gaccggggcc atcgcttcct
      301 gaaaggcggt cttgtcgata tccttgatga tctgcgcccc gcccgcgacg accttttcct
      361 cggacgcctt ttcctgctcg gcccacagct tgcgctcgac ctcgaccgag ttcttgccgg
      421 cggtcttgat gatctcctga tcctcggggc tcagcttttc ccaggacagt ttcgacatcg
      481 ccaccagttc cggcaccatc aggtgttcgt ccagggtata gtatttggcg acctcggcat
      541 ggcccgaact gtcatagctg ggaaagttgt tctcggcccc gtcgatgacg ccggtctgga
      601 tggctgaata gacctcgcca tagggcatcg gcgtcgcgtt cgcgccaagc gccgacatca
      661 tgtccacgaa gacgtcgttc tgcatcacgc ggaacttcat gcccttcaga tcctcgatcg
      721 aggtgatggg tttctggctg ttgtagaagc tgcgcgcgcc gccatcataa tagccaagaa
      781 cgatcagatc cttttccgcg aaattctgcg cgatttcttc gccgatcgga ccatcaagca
      841 cgttgtgcat ctgatcctgc gaccggaaca ggtagggcag cgagaaaagc tgggtgaccg
      901 gcacgatgtc gttgaacgtg ccgaagctgg cacgaaccat gtcgatcacg ccgaactggg
      961 tctgctcgat cgtgtccttt tcctctccca gctgcgcggc cgggaagacc tcgatgcaga
     1021 tgcggccatc ggatttctcc ttgacctcgc tggccatcga cttgaccccc tcgacggtcg
     1081 gatagccgtc ggggtgggtg tccgatgacc gcagcgtgat ttcgcattcc gcagccgcgc
     1141 ccgcggttgc gaaggcggcc gaagccagca gcccgatcag tgtcgtattc aggaacttca
     1201 tgtttaatcc tccctggatg aagctcaaag tctgtaggcc cgtttggcga ggccgtgggc
     1261 cagctcgcgc gccacttcgg gcgcttcctc cccgtccagc cggccggttg cgaccagcgt
     1321 ggccagatag gcgcaatcca ctcgccgcgc gacgtcgtgg cgggcgggga tcgaacagaa
     1381 ggcacgggta tcgtcgttga aaccgaccgt gttgtagaaa cctgccgttt cggtcgtcgt
     1441 ctcgcgaaag cggcgcatcc cct
//
LOCUS       DTVW01000624            2619 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1762419, whole
            genome shotgun sequence.
ACCESSION   DTVW01000624 DTVW01000000
VERSION     DTVW01000624.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2619)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2619)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2619
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1762419"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..429
                     /locus_tag="EYO87_08200"
     CDS             <1..429
                     /locus_tag="EYO87_08200"
                     /EC_number="2.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007816527.1"
                     /note="Catalyzes the synthesis of acetoacetyl coenzyme A
                     from two molecules of acetyl coenzyme A. It can also act
                     as a thiolase, catalyzing the reverse reaction and
                     generating two-carbon units from the four-carbon product
                     of fatty acid oxidation; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acetyltransferase"
                     /protein_id="HIC65964.1"
                     /translation="NSSSISDGAAALAIGADGDGALARILGHASHAQQPGQFPTAPVP
                     AAQKLLERIGWSAADVDLWEVNEAFAVVPMAFMARMGLDHGIVNVNGGACALGHPIGA
                     SGARIIVTLIHALRSRGGRRGVAAICIGGGEGTAIAVELV"
     gene            608..2020
                     /locus_tag="EYO87_08205"
     CDS             608..2020
                     /locus_tag="EYO87_08205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352477.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="circularly permuted type 2 ATP-grasp protein"
                     /protein_id="HIC65965.1"
                     /translation="MMTYYNEMYEGKRVRDPYARLSDWVDTMPDDFRQMKQAEAEALF
                     RRIGITFAVYGEGGDPDRLIPFDMMPRVFEQNEWRKLERGIKQRARALNAFLRDVYGR
                     GEIIRASRIPAKLVYQNDAYEKAVVGVIPPRGVYSHIIGIDLVRTAKDEFFVLEDNCR
                     TPSGVSYMLENREIMMRMFPQLFRGNRIEPVDQYPDLLRRTLESVAPQKCEGRPTCVI
                     LTPGHFNSAYYEHSFLANLMGVELVEGADLFVDGEFVYARTTQGPKRIDVIYRRIDDP
                     FLDPLCFRPDSLLGVPGLMDVYRSGGVSICSAPGAGVADDKAIYTFVPEMVRFYLGEE
                     PILNNVQTWTLWKDDDYRYVMENLPDLVVKEVHGSGGYGMLVGPKSTSDEIEAFRAKI
                     AADPSNYIAQPTLSLSTCPTFVEEGIAPRHVDLRPYCLCGDRIELVPGGLTRVALREG
                     SLVVNSSQGGGVKDTWVLSE"
     gene            2036..>2619
                     /locus_tag="EYO87_08210"
     CDS             2036..>2619
                     /locus_tag="EYO87_08210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011747164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-E domain-containing protein"
                     /protein_id="HIC65966.1"
                     /translation="MLCRTASNLFWMGRHLERAETAARLLDVGQRITLLPNTEAGYQN
                     EWNSLLQASGTSALFADKYGEITQEKIEEFIFFDRENPSSVVSCIEKAREAGRIVRTA
                     LTSQVWDALNVSYQELRKIEKTPRSRIDTANLTDFTTGHTSTVRGAINATQLRNDGWH
                     FMNLGYGLERADATARLLDVKYFVLLPRIEFVGSG"
BASE COUNT          487 a          813 c          834 g          485 t
ORIGIN      
        1 aattccagct cgatttcgga cggggcggcg gcgctggcga tcggcgcgga cggggatggc
       61 gcattggccc ggatcctggg tcatgccagc cacgcgcaac agccgggaca atttccgacc
      121 gcgcccgttc ccgccgccca gaagctgttg gagcggatcg gctggtccgc cgccgatgtc
      181 gatctgtggg aggtgaacga ggctttcgcg gtcgtgccga tggcgttcat ggcgcggatg
      241 ggactggatc atggcatcgt caacgtcaat ggcggggcct gcgcgcttgg ccacccaatc
      301 ggtgcctcgg gcgcgcggat catcgtcacc ctgatccatg cactcaggtc tcgcggcggt
      361 cggcgcggtg tggcggccat ctgcatcggc ggcggagaag gcacggcaat cgccgttgaa
      421 ctggtttagc cctgcccaaa actttggcag cctgccgcgc cgggggcatc ccggaccgcg
      481 gaggaggccg gcattcgcgg aactttcgtg catttcccgg ctttcccctg tggactccac
      541 aggaccggtc tctgatcatc ggcagcctga aaggcctgtg aagggctgat ggtccaaccc
      601 gggggggatg atgacatact acaatgaaat gtatgaagga aaacgagtcc gagaccccta
      661 tgcgcgcctc agcgactggg tggacacgat gccggacgat ttccgccaga tgaaacaggc
      721 agaggccgag gcgctgttcc gtcgcatcgg catcaccttc gcggtctatg gcgagggcgg
      781 cgatcccgac cggctgatcc ccttcgacat gatgccgcgc gtcttcgaac agaacgaatg
      841 gcgcaagctg gaacgcggca tcaagcagcg cgcccgggcc ctgaacgcct ttctgcgcga
      901 tgtctatggc cggggcgaga tcattcgcgc cagccgcatc cctgccaaac tggtctatca
      961 gaacgacgcc tatgaaaagg ccgtggtcgg cgtcatccct ccgcgcggcg tctattccca
     1021 catcatcggc attgaccttg tccgcaccgc caaggacgaa ttcttcgtgc tggaagacaa
     1081 ttgccgcacg ccgtcaggcg tcagctacat gctggaaaac cgcgagatca tgatgcggat
     1141 gtttccgcaa ttgtttcggg gtaaccggat cgagccggtg gaccaatatc ccgacctgct
     1201 gcgtcgcacc ctggaatcgg tggcgcccca gaaatgcgag gggcggccga cctgcgtgat
     1261 cctgacgccg ggacatttca acagcgccta ttacgaacac agctttctgg ccaacctgat
     1321 gggcgtcgaa ctggtcgagg gtgcggatct cttcgtcgat ggggaattcg tctatgcccg
     1381 cacgacacag gggccgaagc gtatcgatgt catctatcgc cggatcgacg atccgtttct
     1441 cgatccgctg tgtttccggc ccgattccct gctgggcgtt ccggggttga tggatgtcta
     1501 tcgctcgggc ggggtctcga tctgctcggc ccctggcgcg ggggttgccg atgacaaggc
     1561 gatctatacc ttcgtgcccg agatggtccg cttctacctg ggcgaggagc cgatcctgaa
     1621 caacgtccag acctggaccc tgtggaagga tgacgactac cgctatgtga tggagaacct
     1681 gccggatctg gtcgtgaagg aggtccacgg atcgggcgga tacggaatgc tggtgggtcc
     1741 gaaatccacc agcgacgaaa tcgaggcgtt ccgcgccaag atcgccgccg atccgtcgaa
     1801 ctacatcgcc cagccaacgc tgtcattgtc cacctgcccc accttcgtcg aggaaggcat
     1861 cgcgccgcgc catgtcgatc tgcggcccta ttgcctgtgc ggcgaccgga tcgaactggt
     1921 gccgggcggg ctgacccgcg tggccttgcg cgaaggcagc cttgtggtga actcatcgca
     1981 gggcggcggc gtcaaggaca cctgggtcct gtcggaataa cagaggggaa cgaccatgct
     2041 gtgccgcacc gcctcgaacc tgttctggat gggccgccat ctggaacgcg cggaaaccgc
     2101 cgcccgcctg ctggatgtgg gccagcggat caccctgctg cccaataccg aggcgggcta
     2161 ccagaacgaa tggaactcgc ttctgcaggc ttcgggcacc tcggccctgt tcgccgacaa
     2221 atacggcgag atcacgcagg aaaagatcga ggaattcatc ttcttcgacc gcgaaaaccc
     2281 gtcttcggtc gtgtcctgca tcgaaaaggc ccgcgaagcc ggacgcatcg tgcgcaccgc
     2341 gctgaccagc caggtctggg acgcgctgaa cgtcagctat caggaattgc gcaagatcga
     2401 gaagacgccg cgatcccgca tcgacacggc gaacctgacg gatttcacca ccggccatac
     2461 ctcgaccgtg cgcggcgcga tcaatgcgac ccagcttcgc aacgatggct ggcatttcat
     2521 gaatctgggc tatggcctgg aacgcgcgga tgcgacggcg cggctgctgg atgtgaaata
     2581 tttcgtcctt cttccccgga tcgaattcgt gggctccgg
//
LOCUS       DTVW01000625            2578 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1765859, whole
            genome shotgun sequence.
ACCESSION   DTVW01000625 DTVW01000000
VERSION     DTVW01000625.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2578)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2578)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2578
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1765859"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1083
                     /locus_tag="EYO87_08215"
     CDS             <1..1083
                     /locus_tag="EYO87_08215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005854055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter substrate-binding
                     protein"
                     /protein_id="HIC65967.1"
                     /translation="TNDVITFEANPEYREPDKPAFATLTIKGGGDASAAARAVLETGE
                     YDYAWNTQLAPDVLAGMEAGGKGKVQVAFGSLVERILVNLTDASSSLPEGERSTAKNP
                     NPITTDPAVRKALSMAIDRSLLTEIGYGQAGKPTCNLVPAPEAWASDNTDCLTQDIEG
                     AKKVLEDAGWVDNGSGVREKDGVRLSLLYQTSVNAVRQDFQALIKQWWSEIGIETELK
                     TVDASVFFGGDAGSPDTFQKFYADVEMYANNFEGNNPEPYLAQWTCDKAPRPETQWQG
                     ENHARFCDPEYDKLVAELGKTVDLTERGNLGKKMNDMLTKDSNVIIPLVYRGTASAVS
                     NTLEGVKLNAWDTEIWNVADWSRKKQ"
     gene            1229..2236
                     /locus_tag="EYO87_08220"
     CDS             1229..2236
                     /locus_tag="EYO87_08220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011048515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HIC65968.1"
                     /translation="MLNFTIRRLLLAIPTLLFISLVIFLLLEASPGDPLADVPLTVPP
                     EVKEKMREALGLGQAWYIRYVLWLKQFFWVEPVYWFDQAFGTDFSAGAQRIISFQSRS
                     PVFDIIAQRLPQTLVVVGMSYVVGVMIAIPIGIVSAYKQYSWFDQLGTFVSMVGFSMP
                     TFFTGVVLIIVFGVKLQWFPSVYDTTLVVRDWNSFLAQVRQMVMPVTVLALYNAAQIS
                     RFMRASMLDNLGQDYVRTARAKGLGERKVVLKHVLRNSLIPVVTVIALGLPTVFGGAI
                     ITEQVFKVNGLGQLLITAINGNDIPMVLTLTFIFAILIVMFTLIADILYGVLDPRIRY
                     D"
     gene            2229..>2578
                     /locus_tag="EYO87_08225"
     CDS             2229..>2578
                     /locus_tag="EYO87_08225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HIC65969.1"
                     /translation="MTETERQRHLDTAELVDESAGNAAVTADLPPDDPVRAGGETRSQ
                     WRDVWRQFRSHRGAMVALVLFVLVLLFVSIGPWLWTIDPTYVDIRARNSGFVAAHPLG
                     TDQLGRDMLARLMAG"
BASE COUNT          479 a          841 c          806 g          452 t
ORIGIN      
        1 accaacgacg tgatcacctt cgaggccaac cccgaatatc gcgaacccga caagcccgcc
       61 ttcgccacgc tgaccatcaa gggcggcggc gatgcatccg ccgccgcgcg cgcggttctg
      121 gaaaccggcg aatacgacta tgcctggaac acgcagctgg cgccggacgt gctggcgggg
      181 atggaagccg gcggcaaggg caaggtgcag gtcgccttcg gcagcctggt cgaacgcatc
      241 ctggtcaacc tgaccgacgc ctcctcatcc ctgcccgaag gcgaacgttc gaccgccaag
      301 aaccccaacc cgatcaccac ggacccggcc gtgcgcaagg cgctgtccat ggccatcgac
      361 cgcagcctgc tgaccgagat cggctatggt caggccggca agcccacctg caacctggtc
      421 cccgcgcccg aggcatgggc ctcggacaac accgactgcc tgacccagga catcgaaggg
      481 gccaagaagg ttctggaaga tgccggttgg gtcgataacg gcagcggcgt ccgcgagaag
      541 gacggcgtca ggctgtcgct gctgtaccag acctcggtca atgccgtgcg tcaggacttt
      601 caggcgctga tcaagcaatg gtggtcggaa atcggcatcg agaccgagtt gaagaccgtc
      661 gatgcctcgg tcttcttcgg cggggatgcg ggctcgcccg acacgttcca gaaattctat
      721 gccgatgtcg agatgtatgc caacaacttc gaaggcaaca accccgagcc ctatctggcg
      781 caatggacct gcgacaaggc gccccggccg gaaacccaat ggcagggcga aaatcacgcc
      841 cgcttctgcg acccggaata tgacaagctg gtcgccgaac tgggcaagac ggtcgatctg
      901 accgaacgcg gcaatctggg caagaagatg aatgacatgc tgaccaagga cagcaacgtc
      961 atcatcccgc tggtctatcg cggcaccgcc tcggccgtca gcaacacgct ggaaggcgtc
     1021 aagctgaatg cctgggacac cgagatctgg aatgtggcgg actggtcgcg caagaagcag
     1081 tgatctgaac cgatgatccg ggccgcccgc ctcgccgcag gcggcccggt ttccgcctac
     1141 ccccatccgc cagaaggcgg cgcaagggcg ggtcgacaac agggacggca cccatgcgca
     1201 tcacgacagg aacccgaagg gccgcgtcat gctgaatttc accatccggc gcctgctgct
     1261 ggcgattccc acgcttctgt tcatctcgct ggtgatcttc ctgctgctgg aggcctcgcc
     1321 cggcgatccg ctggccgacg tgccgctgac agtgccgccc gaggtgaagg aaaagatgcg
     1381 cgaggcgctt gggctgggac aggcctggta tatccgctat gtcctgtggc tgaagcagtt
     1441 cttctgggtc gagccggtct actggttcga ccaggccttc ggcaccgatt tcagcgccgg
     1501 cgcacaacgc atcatcagct tccagtcgcg cagccccgtc ttcgacatca tcgcgcagcg
     1561 cctgccgcag acgctggtgg tggtcggcat gtcctatgtc gtcggcgtga tgatcgcgat
     1621 cccgatcggc atcgtctcgg cctacaagca gtatagctgg ttcgaccagt tgggcacctt
     1681 cgtgtcgatg gtcggcttct cgatgccgac cttcttcacc ggggtcgtgc tgatcatcgt
     1741 cttcggggtc aagctgcaat ggtttccctc ggtctatgac accacgctgg tggtgcgcga
     1801 ctggaacagc tttctggccc aggtccggca aatggtcatg ccggtgacgg ttctcgcgct
     1861 gtacaacgcg gcgcagatca gccgtttcat gcgcgcctcg atgctggaca atctggggca
     1921 ggattacgtc cgcaccgccc gcgccaaggg cctgggcgaa cgcaaggtgg tgctgaaaca
     1981 cgtgctgagg aacagcctga tcccggtcgt caccgtgatc gcgcttggat tgcctacggt
     2041 gttcggcggc gccatcatca ccgagcaggt gttcaaggtg aacgggcttg gacaattgct
     2101 gatcacggcc atcaacggca acgacattcc gatggtgctg acgctgacct tcatcttcgc
     2161 gatcctgatc gtgatgttca ccctgatcgc cgacatcctc tacggcgtcc tcgacccccg
     2221 gatccgctat gactgagacc gaacgccaac gtcacctcga cacggccgag ctggtcgacg
     2281 aaagcgccgg aaacgcggcc gtcaccgccg acctgccgcc agacgacccg gtccgtgcgg
     2341 gcggcgagac gcgcagccag tggcgcgatg tctggcggca gttccgcagc cacaggggcg
     2401 cgatggtggc gctggtgctg ttcgtcctcg tgctgctgtt cgtctcgatc gggccctggc
     2461 tgtggacgat cgatccgacc tatgtcgata tccgcgcccg caattccggc ttcgtggccg
     2521 cccatccgct gggcaccgac cagttgggcc gcgacatgct ggcccggctg atggcggg
//
LOCUS       DTVW01000626            1872 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1768037, whole
            genome shotgun sequence.
ACCESSION   DTVW01000626 DTVW01000000
VERSION     DTVW01000626.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1872)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1872)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1872
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1768037"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1872)
                     /locus_tag="EYO87_08230"
     CDS             complement(<1..>1872)
                     /locus_tag="EYO87_08230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018001070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor"
                     /protein_id="HIC65970.1"
                     /translation="AAEGYVSDYSQAATKSDTPIAEMQQSVSVVTSDQITDQGARNLG
                     QALGYTAGVLAEPFGVDPRFDTPYIRGFRADNAQYINGLRQGRYFGAIGQELYGVQQI
                     EVLRGPSSSLYGAGSPLGVINLVQKRAQDGDFGEAGIGYGSTGSAQAFFDVNRAPSDA
                     LSWRLTGIRRDDSTQIEDLTDRGGYLAGAMRWRPDDGTTIDLMVNYTRDAPMSPTGVP
                     FALTRTGDGDSLRDLYTGQKDWDDSDRTAASVSLELSHELDGGWTLSQGFRYEKLDWD
                     YRSTYAIAVTGEDRFSRGSSRQSEDSETISLDTRLAGEVTTGQAVHRLLFGADIRQYD
                     AYESSQFGTATDLNWRDPDYNAGGRNFFGQPNAGPSLLRQAGLYAQDEIEYGNWRGSL
                     GLRYDWVEQTGERYGSAADYKDNQLTGRLGLAYVMANGVTPYVSYATSFDPQAGQDID
                     GNALRPTEGKQWELGVKFRPTAFDGLMTAALYDLRQTNVNRSVLEGGISGLRQIGEVA
                     SRGFEIEATAEIAEGWKLRGGYAYNETEQVAPSGDPLDGNELADAPNHLASLWIDREF
                     GNGLRLGGGVRYIGERYIDAANSAELDSVTLIDLAAGYTAGNVEMSLNLTNLTDEVY"
BASE COUNT          305 a          618 c          587 g          362 t
ORIGIN      
        1 catagacctc gtcggtcagg ttggtcaggt tcagcgacat ctcgacattg ccggcggtat
       61 agcctgcggc cagatcgatc agcgtcacgc tgtccagttc ggcggaattg gccgcatcga
      121 tgtagcgttc gccgatatag cggaccccgc cgcccagccg caggccgttg ccgaattccc
      181 ggtcgatcca caggcttgca agatggttgg gcgcatcggc cagttcgttt ccgtccagcg
      241 gatcgcccga gggcgcgacc tgttcggttt cgttataggc atagccgccg cgcagtttcc
      301 aaccttcggc gatctcggcc gtggcctcga tctcgaaccc gcgcgatgcc acctcgccga
      361 tctggcgcag gccgctgatg ccgccctcca ggaccgaacg gttcacattc gtctggcgca
      421 ggtcgtagag cgcggcggtc atcagcccat cgaacgcggt gggccggaat ttcaccccca
      481 gttcccattg ctttccctcg gtcgggcgca gggcattgcc gtcgatatcc tggccggcct
      541 gcggatcgaa cgaggtcgca taactgacat agggtgtgac gccattggcc atgacatagg
      601 ccagacccag gcggccggtg agctggttgt ccttgtagtc cgcagcgctt ccgtagcgtt
      661 caccggtctg ttccacccaa tcgtagcgca aacccagcga tccgcgccag ttgccgtatt
      721 cgatctcgtc ctgcgcatag aggcccgcct gacgcagcag cgagggcccg gcattgggct
      781 gaccgaagaa attgcggccc ccggcattat aatcgggatc gcgccagttc aggtcggtcg
      841 cggtgccgaa ctggctgctt tcataggcgt cgtattgacg gatatcggcg ccgaacagca
      901 gccggtggac ggcctgcccg gtcgtgacct cgccggccag acgggtgtcg aggctgatcg
      961 tctcgctgtc ctcgctctgc cggctggagc cgcggctgaa cctgtcctcg ccggtgacgg
     1021 cgatcgcgta ggtgctgcga taatcccaat ccagtttctc atagcggaat ccctggctca
     1081 gcgtccagcc gccgtccagt tcgtggctca gttccaggct gacgctggcg gcggtgcggt
     1141 cgctgtcgtc ccagtctttc tggccggtat acagatcgcg caaggaatcg ccgtcgcccg
     1201 tccgggtcag cgcaaagggc acgcccgtcg gcgacatcgg cgcatccctg gtatagttca
     1261 ccatcaggtc gatggtggtg ccgtcatcgg gtcgccagcg catcgccccg gccagatagc
     1321 cgcccctgtc ggtcagatcc tcgatctggg tgctgtcgtc ccggcggatg cccgtcagac
     1381 gccaggacag ggcgtcggac ggggcgcggt tcacgtcgaa gaacgcctgc gcgctgccgg
     1441 tgctgccata gccgatcccg gcctcgccga aatcgccatc ctgcgcccgt ttctggacca
     1501 gattgatcac gcccagcggc gatccggccc cgtaaagcga tgatgacggg ccgcgcagaa
     1561 cctcgatctg ctgcaccccg tacaattcct gcccgatcgc cccgaaatag cgaccctggc
     1621 gcaggccgtt gatatattga gcgttatcgg ccctgaagcc gcggatataa ggggtatcga
     1681 agcgtggatc gacgccaaag ggttccgcca aaacgccggc cgtgtagcca agcgcctggc
     1741 ccaggttccg cgctccctga tccgtgatct gatcggaggt gacgaccgaa accgattgct
     1801 gcatctcggc tatgggcgtg tccgatttgg tcgcggcttg cgaatagtcg ctgacataac
     1861 cctcggcggc gc
//
LOCUS       DTVW01000627            3007 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1768847, whole
            genome shotgun sequence.
ACCESSION   DTVW01000627 DTVW01000000
VERSION     DTVW01000627.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3007)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3007)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3007
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1768847"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..316)
                     /locus_tag="EYO87_08235"
     CDS             complement(<1..316)
                     /locus_tag="EYO87_08235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009542658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit M"
                     /protein_id="HIC65971.1"
                     /translation="MLTLAILVPLAGAALLMMASGLGLRAARWTAVAFAAVPLLLLVI
                     VWAGFDNGPGAPAFQATAEVPWIPSLGVAWRVGVDGISLALALMSALLFVGCVAALLA
                     LCA"
     gene            complement(318..2141)
                     /locus_tag="EYO87_08240"
     CDS             complement(318..2141)
                     /locus_tag="EYO87_08240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009542657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit L"
                     /protein_id="HIC65972.1"
                     /translation="MTLWLVPLLPMLAGIAIAAFGPQSRRALAAISGGVLAATLILAV
                     LAVAGGWTGALDWGGGIALTARLVPLSALILVMVPAVALPVTVHAALHEAQRGLPRLV
                     GLMLLFTGGMVLVVAAADLLTLLIGWELIGACSWALIGHDWRDRDNPASGLYAFVMTR
                     FGDLGLFLAAMAAFGATGSFAYDALGGLQGPALLIVAYGVLLSAASKAGQVPFSPWLF
                     RAMAGPSSVSALLHAATLVAAGAYILARLHPVLSAATGWSVTVLSVGLATALAGGIVA
                     VLQNHAKRLLAGSTSAQLGLMFVATGSGYPGVAALHLVAHAFYKAPLFLAAGLAGDRA
                     GTYALDRLRLGRVMPLVAGAAAVAALALAAIPPLGGAWTKEEILKAAEAAGPWVAFGV
                     VAAGAMSAAYATRFLLLAFGIGKADDESPAWPEIVGPLALSAVTLILSALWLGPVSGD
                     LAALLGIALPEGSRFWLALSLLVVALGVASGVYLSRESPDLGTAGTAAAAADWLGLPT
                     LVFRAVVQPFERLATSAASLDTRAVDGGIRATVTLMEWAARTSQRFGEAATDGLPEGT
                     ARLTSLAGRDLRRLQTGMSHHYYAYLVGGLALIIVFLALGA"
     gene            complement(2138..2443)
                     /gene="nuoK"
                     /locus_tag="EYO87_08245"
     CDS             complement(2138..2443)
                     /gene="nuoK"
                     /locus_tag="EYO87_08245"
                     /EC_number="1.6.5.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019310381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoK"
                     /protein_id="HIC65973.1"
                     /translation="MTLSAILIVSAALFGIGLYGALSQKSFVMLMMGLELMLNGSLLA
                     TMGFWSLALGGAPKGQLLAIIIMAVMAIELAIGFALIVAVYRKRQADVTEALETLAR"
     gene            complement(2440..>3007)
                     /locus_tag="EYO87_08250"
     CDS             complement(2440..>3007)
                     /locus_tag="EYO87_08250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007117925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit J"
                     /protein_id="HIC65974.1"
                     /translation="FARRGRLDTQAEMMAVEMMVMGLFMVMFMMNPAGLNPMMMVHQH
                     RLSIVAGLLIFAAMTGAVLLTPLPSDPVAADRPVLRDLGIELLGDSMLIFETAGVTLL
                     ATMLGAVVLSSRRGRFGPTDAGSVPPGLSAGGPPAGRQPKGGGSHGGHGGHGGQGGKG
                     AHDGHGGGGSHGGHGKNGGDGNHGGHGG"
BASE COUNT          600 a         1108 c          956 g          343 t
ORIGIN      
        1 ccgcgcacag ggcgagcagc gcggcgacgc agcccacgaa cagcagcgcg ctcatcagcg
       61 cgagggcaag cgagatgcca tcgaccccga cccgccaggc aacgccgagc gacgggatcc
      121 acggcacctc ggcggtcgcc tgaaaggccg gcgcgccggg gccgttgtca aaacccgccc
      181 agacaatcac cagcagcagc agcggaaccg ccgcgaacgc gaccgcggtc cagcgcgccg
      241 cgcgcaggcc aagcccgctt gccatcatca gcagcgcggc ccccgcgagc ggcacgagaa
      301 tggcaagtgt cagcatgtca ggctcccaat gccagaaaaa cgatgatcag cgccagcccg
      361 ccgacgagat aggcataata atgatgcgac atcccggtct gaagccgccg caggtcgcgg
      421 ccggccagac tggtcaggcg cgcggtgccc tcgggcaggc cgtccgtcgc cgcttcgcca
      481 aagcgttggc tggtgcgcgc cgcccattcc atcagcgtga cagtggcgcg aatgccaccg
      541 tccacggcgc gggtgtccag cgatgcggcg gaggtcgcca gccgctcgaa gggctgaacg
      601 acggcacgaa agacaagcgt cggcaggccc agccaatcgg cggcagccgc ggcggtgccg
      661 gcggtgccga gatcggggct ttcgcgcgac agatagacgc cgcttgcgac cccgagcgcg
      721 accacaagca gcgacagagc cagccagaag cgcgatccct cgggcagggc gatgcccagc
      781 aatgccgcaa gatcgcccga aaccggaccg agccaaagcg ccgacaggat cagcgtcacc
      841 gccgacagcg cgagaggacc gacgatttcc ggccaggcgg ggctttcgtc atcggccttg
      901 ccgataccga atgccagcag caggaagcgc gtggcgtagg ccgcgctcat ggcgccggcg
      961 gcgaccaccc cgaaggccac ccaggggccc gccgcctcgg ccgccttcag gatttcttcc
     1021 ttggtccagg caccgcccag tggcggtatc gcagccagcg ccagtgccgc cacagccgcg
     1081 gcgcccgcga caagcggcat cacccgaccc agccgaaggc ggtccagcgc ataggtgccc
     1141 gcgcgatccc ccgcgaggcc ggcggccaga aacagcggcg ccttgtagaa ggcatgcgcg
     1201 accaggtgca gcgcggccac gcccggatag ccgctgccgg tggcgacgaa catgagaccg
     1261 agttgcgccg aggtggaccc ggccagcagc cgcttggcat ggttttgcag cacggccacg
     1321 atgccgccgg ccagtgccgt cgccaacccg accgacagaa ccgtgaccga ccagccggtc
     1381 gccgcgctca gcaccgggtg cagccgtgcc aggatatagg cgcccgccgc caccagtgtc
     1441 gccgcatgaa gcagcgcgga taccgaactc ggtccggcca ttgcccggaa cagccagggc
     1501 gagaacggca cctgaccggc cttcgacgcc gccgacagaa gcacgccgta ggccacgatc
     1561 agaagcgccg gtccctgcaa gccgccaagc gcgtcatagg caaaggagcc cgtcgcgcca
     1621 aaggccgcca tcgcggcgag gaaaagcccc agatcgccaa agcgcgtcat gacgaaggca
     1681 tacagccccg aggcggggtt gtcccgatcg cgccagtcat ggccgatcag ggcccaggaa
     1741 caggcgccaa tcagttccca tccgatcagc agggtcagca gatcggcggc ggcaaccaca
     1801 agcaccattc cgccggtgaa cagcagcatc agccccacca gcctcggcag cccgcgctgt
     1861 gcttcgtgca gcgcggcatg gaccgtgacc ggcagcgcga cggccggcac catcaccagg
     1921 atcagcgccg acaggggcac gaggcgcgcg gtcagcgcga taccgccgcc ccagtcaagc
     1981 gccccggtcc agccgcccgc gaccgcaagc acggcgagga tcagcgtcgc cgccagcacc
     2041 ccccccgaaa ttgcggccag cgcccggcgc gattgcgggc cgaaggctgc gatggcgatt
     2101 ccggcaagca tcggcagcag gggaacgagc cagagtgtca tcgcgccagc gtctccagcg
     2161 cctcggtcac atcggcctgc cgcttgcgat agacggcgac gatcagggcg aaaccgatgg
     2221 caagctctat cgccatcacc gccatgatga tgatggccag aagctgaccc ttgggtgcgc
     2281 cgccaagagc cagcgaccag aaccccatcg tggccagcag cgacccgttg agcataagct
     2341 caagtcccat catcagcatg acaaaggatt tctgtgacag cgcaccgtaa agcccgatgc
     2401 cgaacaacgc cgccgagaca atcaggatcg ccgaaagtgt catccgccat gccctccgtg
     2461 attgccatcc ccaccgtttt tgccatgtcc gccgtggctg cccccgccac catggccgtc
     2521 gtgggcgcct ttgccaccct ggccgccgtg cccaccatgg ccgccatggc tgccgccgcc
     2581 tttcggctgc cgacccgccg gggggccacc cgccgaaagt cccggcggaa ccgatcccgc
     2641 atccgtcggc ccgaaacgcc cccttcggct ggacaggacg accgcgccca gcatcgtcgc
     2701 cagcagggtg acgcctgccg tctcgaagat cagcatcgaa tcgcccagca attcgatgcc
     2761 gaggtcgcgc aggaccggcc ggtcggcggc caccggatcg gaaggaagcg gcgtcagcaa
     2821 cacggcgccc gtcatcgcgg caaagatcag cagcccggcc acgatcgaca ggcgatgctg
     2881 gtgcaccatc atcatcgggt tcagccctgc gggattcatc atgaacatca ccatgaaaag
     2941 tcccatgacc atcatttcca ccgccatcat ttccgcctgg gtatccaggc ggccacgcct
     3001 agcaaac
//
LOCUS       DTVW01000628            1709 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1769588, whole
            genome shotgun sequence.
ACCESSION   DTVW01000628 DTVW01000000
VERSION     DTVW01000628.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1709)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1709)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1709
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1769588"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..354
                     /locus_tag="EYO87_08255"
     CDS             <1..354
                     /locus_tag="EYO87_08255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008282596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HIC65975.1"
                     /translation="LKLIDHLGLVQNAGETGNYFWQNMREQVGGHGHVGEVRGEGMLC
                     AVELVADKEKRIFFEAADGKGAKVVAAMLKRGVIARAMPQGDILGFAPPLCLTKSEAD
                     QIVSVTKDAITEVLG"
     gene            complement(356..988)
                     /locus_tag="EYO87_08260"
     CDS             complement(356..988)
                     /locus_tag="EYO87_08260"
                     /inference="COORDINATES: protein motif:HMM:PF12804.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HIC65976.1"
                     /translation="MIRAGLLLAAGASRRFGPKDKLLSPLRGRPLIAHAAEAMRRAAL
                     DRRIAVIANPDLAPHLAGFEIVPIAPGGQSDSLRAGLAAAGRPDLLLIALADMPFVSA
                     RHLDRVVAAASDTMPSASRDRGPPMPPACFPAAWLPRLAALKGNRGAGPLIGDLPPAA
                     VIEAAGQLADIDTVNDLARIRRATRPARLSHSSQIPRGSGGGAPGRRGTR"
     gene            complement(985..>1709)
                     /locus_tag="EYO87_08265"
     CDS             complement(985..>1709)
                     /locus_tag="EYO87_08265"
                     /inference="COORDINATES: protein motif:HMM:PF13478.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65977.1"
                     /translation="PRRPGAAMALWPDGGRVGRLGAGCIDADIAGHVGAARAVTHLTY
                     GLGGPIDLPLPCGGTVHIALIQRPDPVWLAAIGADSAARRTGRWRIDLVTGAASRDAA
                     TGFALVLPPPPAVILHGEGDEAEALASMVAALDLPCHRGEKAPPPDAQSAVVTLFHDH
                     DRELPPLRAALASPAFYIGALGSRRAQLARQAALRETGIDEAALVRLRGPIGVVSPVR
                     EPRLLAASVLTEILAAYDAQFG"
BASE COUNT          272 a          574 c          643 g          220 t
ORIGIN      
        1 ctgaagctga tcgaccacct tggactggtg cagaatgccg gcgagaccgg caattacttc
       61 tggcagaaca tgcgcgagca ggtcggcggc catggtcatg tcggcgaggt tcgcggcgaa
      121 gggatgctgt gcgcggtgga actggtcgcg gacaaggaaa aacgcatctt cttcgaggct
      181 gccgatggca aaggcgccaa ggtcgtggcc gcgatgctga aacgcggcgt gatcgcgcgg
      241 gccatgccgc agggcgacat tctgggattc gcgccgccct tgtgcctgac gaagtccgag
      301 gccgatcaga tcgtgtcggt gacgaaggac gcgatcaccg aggttctggg atagcttatc
      361 gcgtcccgcg acggccgggg gcgccgcccc cggacccccg aggtatttga gaagagtgcg
      421 aaaggcgggc cggccgggtt gcgcgccgga tccgggcgag atcgttcacc gtgtcgatat
      481 cggccagttg accggcggcc tcgatcaccg ccgccggcgg cagatccccg atcagcgggc
      541 ccgcgccccg gttgcctttc aaggccgcca gtcttggcag ccaggccgcc ggaaaacagg
      601 ccggcggcat gggcgggccg cggtcgcggc tggccgaggg catcgtgtcg ctggcagcgg
      661 cgacaacccg gtccagatgt cttgcgctga cgaagggcat gtcggccagc gcgatcagca
      721 agaggtccgg acggcccgcg gcggccagtc ccgcacgcag gctgtcggac tgcccgcccg
      781 gggcgatggg cacgatctcg aagccggcca gatgaggcgc caggtccgga ttggcgatga
      841 ctgcgatacg gcggtccagc gccgccctgc gcatcgcctc ggcggcgtgg gcgatcagcg
      901 ggcggccgcg aagcgggctc agcagcttgt ccttcggtcc gaagcggcgc gaggcgccag
      961 cggccagcag cagcccggcg cggatcatcc gaactgtgca tcataggcgg ccaggatctc
     1021 ggtcaggacc gaggcggcca gaagacgcgg ttcgcgcacg gggctgacga cgccgatcgg
     1081 gccgcgcaga cggaccagcg ccgcctcgtc gatccccgtc tcgcgaaggg ccgcctgacg
     1141 cgcaagctgt gcccgtcgcg atccgagcgc gccgatatag aaggcgggcg aggccagcgc
     1201 cgcgcgcagg ggcggcaatt cccggtcatg gtcgtgaaac agcgtcacga cggcgctctg
     1261 ggcgtccggc ggcggagcct tttcgccccg gtggcagggc agatcgagcg cggcgaccat
     1321 ggacgccaga gcttcggcct cgtcgccctc gccgtgcagg atcaccgcgg gcggtggcgg
     1381 caggaccagc gcaaagcccg tcgctgcgtc gcgggaggcc gccccggtga caagatcgat
     1441 gcgccagcgg ccggtgcgcc gggcggcact gtccgcgccg atggcagcca gccagaccgg
     1501 atcgggacgc tggatcagtg cgatgtgcac ggttccgccg cagggcaagg gcaggtcaat
     1561 cggcccgccc agcccatagg tcagatgggt gacggcacgg gccgcgccga catggcccgc
     1621 gatgtcggcg tcgatgcagc ccgcgcccag ccggccgacc cggccgccat ccggccacag
     1681 cgccatggcc gccccgggcc tgcgcggaa
//
LOCUS       DTVW01000629            2756 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1769931, whole
            genome shotgun sequence.
ACCESSION   DTVW01000629 DTVW01000000
VERSION     DTVW01000629.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2756)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2756)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2756
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1769931"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..353
                     /locus_tag="EYO87_08270"
     CDS             <1..353
                     /locus_tag="EYO87_08270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015499183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65978.1"
                     /translation="RSCGSTPWAPTARTGATVCRRTIPTRVTVTNNAVAVIVTPVAIS
                     LGQQLGVDPRPLVVAVMMGASASFATPIGYQTNTLVYGPGGYRFSDFIRVGLPLNLLM
                     AVTASAVIPIFWPL"
     gene            513..737
                     /locus_tag="EYO87_08275"
     CDS             513..737
                     /locus_tag="EYO87_08275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1127 domain-containing protein"
                     /protein_id="HIC65979.1"
                     /translation="MATTAINDRKTPAAILSALAAPFAAFGRLMVQLAEANPRMQALE
                     RLNRVSDAELAARGLTRDGEIRRIMGVSGF"
     gene            925..1404
                     /locus_tag="EYO87_08280"
     CDS             925..1404
                     /locus_tag="EYO87_08280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65980.1"
                     /translation="MTRLPIAALVAAIAAPVLAAKPADRFIDDRSSPARVITSLYNAI
                     DRHEYLRAWSYFAEDGAPDYATFRDGYTGTGTVALRIGEVRSEGTAGAIHSRVPVAIE
                     ATDTAGGKTVFTGCYRLTQVQPGVQDTPPYRPIRIDGGRLEKSGQSFGQAMGLCETP"
     gene            complement(1408..2268)
                     /locus_tag="EYO87_08285"
     CDS             complement(1408..2268)
                     /locus_tag="EYO87_08285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011907634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HIC65981.1"
                     /translation="MLATGACFVAVNGIVRGLGGALPAPQAAFIRFVFGLVFLAPVLV
                     GALRQGFSVPVWRLFALRGGLHLMAVIMWFYAMSRITVAEATAIGFLNPIMVTIGAAL
                     FLGETLAGRRIAAIAVAFLGALIVLRPGLRPLDPGHLSQVGAAVAFGTSYLLAKRLSG
                     QVPAATVVAVLSLTVSVGLAPIAWAVWVPPTPGQIGWLALVAGFATAGHYTMTRAFAA
                     APLAVTQPVTFLQLIWASLLGVFVFHEPLDGWVILGGGMMIGAITYITWREAQRRART
                     QTPPVNATKA"
     gene            complement(2359..>2756)
                     /locus_tag="EYO87_08290"
     CDS             complement(2359..>2756)
                     /locus_tag="EYO87_08290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018000240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="amino acid transporter"
                     /protein_id="HIC65982.1"
                     /translation="LLVAMKWGGVAFLIVYGARSFAAALRGGEGLRPEGKRASLTATL
                     ATIAALTWLNPHVWLDTVVLLGAISAQWPSAVGFALGAMTGSVLFFFGLGYGARLLVP
                     VFARPSSWRWLEAGVGVVMWVIALRLALG"
BASE COUNT          498 a          993 c          895 g          370 t
ORIGIN      
        1 caagatcctg cgggtccacc ccctgggctc caacagcacg aacgggcgct acggtgtgcc
       61 ggcggacaat ccctacgcgc gtgacggtga cgaacaatgc cgtcgccgtc atcgtcacgc
      121 cggtcgcgat ctcgctgggc cagcagctcg gcgtcgatcc gcgaccgctg gtcgtggcgg
      181 tgatgatggg cgcttcggcc agtttcgcga cgccgatcgg ctatcagacc aacacgctgg
      241 tctacgggcc gggcggctat cgcttttcgg atttcatccg cgtgggcctg ccgctgaacc
      301 tgctgatggc ggtgacggcc tcggcggtga tcccgatctt ctggccgctt tgacggcgaa
      361 ccggacccgg cggcgccgcg cgccatcgga ggccgcaagc ccttgaagca cttgcaatgc
      421 tgccatgcag cattgacggt tgcgtcaacg gccccgagat ccgaccttgg tcgcagggag
      481 gaaacggctt tgtctgacaa aggagtttcc acatggccac caccgcaatc aatgaccgca
      541 agaccccggc tgcaatcctg tcggcgctgg cggcgccctt cgcagccttc ggccggctca
      601 tggtccaact ggccgaagcc aatccccgga tgcaggcgct ggaacgcctg aaccgcgtca
      661 gcgacgcgga actggcggcc cgtggcctga cccgcgacgg cgagatccgc cggatcatgg
      721 gcgtttccgg cttctgaaca ccgcgccaac gtccccgtcg agcgccccct cgggtcagag
      781 cggggtctgg cgggggcggt caagtcggcg cggatgcggt cggccccgcg tccgatcacg
      841 tccgttcccg gcttcgtgcg gcggcggaac ggcgccggcg tggggcgggt ttacccgctg
      901 ttccagatgc cgaaaggttc agtcatgacc cgtcttccga tcgcagccct tgtcgccgcc
      961 atcgccgcgc cggttctggc cgcgaagccc gcggaccggt tcatcgacga tcgctcatcg
     1021 cctgcgcgcg taatcacctc gctctacaac gccatcgacc ggcacgaata tctccgcgcc
     1081 tggagctatt tcgccgaaga cggcgcgccc gactacgcga cgttccgcga cggctacacg
     1141 ggaaccggga ccgtcgccct gcgcataggc gaggtgcgat ccgaggggac cgcgggcgcg
     1201 atccattccc gcgttcccgt cgccatcgag gcgaccgaca cggcgggcgg caagacggtg
     1261 ttcaccggat gctaccggct gacccaggtc cagcccggcg tgcaggacac accgccctac
     1321 cggccgatcc gcatcgacgg aggcaggctg gagaaaagcg ggcagagttt cggacaggcg
     1381 atgggtcttt gcgagacgcc ctgagcctca ggccttggtg gcgttgacgg gcggcgtctg
     1441 cgttctggcg cgacgctgcg cctcgcgcca ggtgatatag gtgatcgcgc cgatcatcat
     1501 cccgccaccc agaatcaccc atccgtccag cggttcgtgg aagacgaaga cgcccagcag
     1561 gctggcccag atcagttgca ggaaggtgac gggctgggtg acggccagcg gcgcggcggc
     1621 gaaggcgcgg gtcatcgtgt aatggcccgc cgtggcaaac cccgcgacca gcgccagcca
     1681 gccgatctgg cccggcgtcg gcggcaccca gaccgcccag gcgatcggcg ccagcccgac
     1741 cgagacggtc agcgacagaa ccgccacgac ggttgcggcg ggcacctgtc ccgacagccg
     1801 tttggccagc agataggagg ttccgaaggc caccgctgcg ccgacctgcg acagatggcc
     1861 cggatccagt ggccgcagcc caggccgcag cacgatcagc gcgcccagaa aggctaccgc
     1921 gatggccgcg atccgccggc cggccagcgt ctcgcccaga aacagcgccg caccgatggt
     1981 caccatgatc gggttgagaa agccgatggc cgtggcctcg gccacggtga tccgggacat
     2041 ggcgtagaac cacatgatca ccgccatcag gtgcagcccg ccacgcagcg cgaacaggcg
     2101 ccagacagga accgaaaatc cctgccgcag ggccccgacc agcaccggcg ccagaaagac
     2161 cagcccgaag acgaagcgaa tgaaggctgc ctgaggcgcc ggcagcgcgc cgccaaggcc
     2221 gcgcacgatg ccgttgaccg cgacgaaaca ggccccggtc gccagcatcc agccgatgcc
     2281 gatcaggtcc cggcgcgtat cacggtcaat ttgcatatcc tgcaactgcc gggtttgacg
     2341 ccctcgcgca aggcccaatc agccaagcgc cagccgaagg gcgatgaccc acatcaccac
     2401 gccgaccccg gcctccagcc agcgccaaga ggacggccgc gcgaagaccg ggaccagcag
     2461 ccgcgcgcca tagcccagcc cgaagaagaa cagcaccgac cccgtcatcg cacccagggc
     2521 gaaccccacg gccgagggcc attgcgccga aatcgccccc agcagcacca ccgtatccag
     2581 ccagacatgg ggattgagcc atgtcagcgc cgcgatcgtg gccagggtcg ccgtcagcga
     2641 ggcccgtttt ccttctgggc gcagaccctc gccgccgcgc agcgccgccg cgaaagagcg
     2701 cgcaccatag acgatcagga aggccacgcc gccccatttc atcgccacca gcagcc
//
LOCUS       DTVW01000630            2197 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1774754, whole
            genome shotgun sequence.
ACCESSION   DTVW01000630 DTVW01000000
VERSION     DTVW01000630.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2197)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2197)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2197
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1774754"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            77..1504
                     /locus_tag="EYO87_08295"
     CDS             77..1504
                     /locus_tag="EYO87_08295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011747723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan -binding protein"
                     /protein_id="HIC65983.1"
                     /translation="MRQSQRAQNAERSLDQAQAEARDRAARITRLNNQLDASRTRLDE
                     ARSRLTDFEAEVAALMAARQQDRIEAEARQADLQTQLSDQRDRASAAALAVAQARNEI
                     DAKTEQARLAAARRDALEALVADLRRRNADAGQDKVALQADLTAAQSRLSEAEAARLT
                     EAEAARALRARLEGADAELTAMTLSLEESRKKAEDTLTLLAAAENARDRLSNEVRTNA
                     AQTERQAALLAKAREELDQSQQISQDSQRRVALLNEQVASLTSQLGSLQALLETAGDD
                     QKQAEVRVETLGRQLNAALLRAAEEKERRLALEREARSKAEAEAKDLARYRSEFFGQL
                     SQILSGREGVKVVGDRFVFQSEILFPPGEASLSPAGRAQIAGVVRMLGDIADKIPPEI
                     DWMIRVDGHTDSTPLSGTGRYRDNWELSQARALAVVRFMIDELQFPANRLAATGFADT
                     RPITDGASPEARAQNRRIELKLTER"
     gene            complement(1522..1857)
                     /locus_tag="EYO87_08300"
     CDS             complement(1522..1857)
                     /locus_tag="EYO87_08300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018897202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="QacE family quaternary ammonium compound efflux
                     SMR transporter"
                     /protein_id="HIC65984.1"
                     /translation="MASPYLPLAMAIALEVVGTSLLQRSQQFSRLWPTLGMAICYLAS
                     FYLLSLALRVLPLGVAYAIWSALGIVLVALICLFVFHQRLDLPAVIGLGLIVAGVIVV
                     NLFSQTAGH"
     gene            complement(1857..2197)
                     /locus_tag="EYO87_08305"
                     /pseudo
     CDS             complement(1857..2197)
                     /locus_tag="EYO87_08305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015821339.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YihY/virulence factor BrkB family protein"
BASE COUNT          435 a          720 c          757 g          285 t
ORIGIN      
        1 tggccagcgc gtcgccgcgc ttggcgaggc cctgaccgcg tcggaagggc gcgaggcggc
       61 gctgcaggac gagaccctgc gtcagtccca acgcgcccaa aacgccgaaa ggtcgctgga
      121 tcaggcccag gccgaggcgc gcgacagggc ggcgcggatc acccggttga acaaccagct
      181 tgatgccagc agaacccggc tggacgaggc aagatcgcgg ctgacggatt tcgaggccga
      241 ggtggcggcc ctgatggccg cgcgtcagca ggatcgcatc gaggccgagg cgcggcaggc
      301 cgatctgcaa acgcaattgt ccgatcagcg ggaccgcgcg tcggcggcag cgctggccgt
      361 cgcccaggcc cgcaacgaga tcgacgccaa gaccgaacag gcgcgtctgg cggcggcgcg
      421 gcgcgatgct ctggaggccc tggtcgccga tctgcggcgt cgcaatgccg atgcgggtca
      481 ggacaaggtc gccctgcagg ccgatctgac cgccgcgcag tcgcgcctgt ccgaggccga
      541 ggccgcgcgg ctgaccgagg ccgaggctgc cagggcgctg cgcgcgcggc tggaaggcgc
      601 cgacgccgaa ctgaccgcga tgacgctgtc gctggaagaa agccgcaaga aggccgagga
      661 cacgctgacg cttctcgccg ccgccgaaaa cgcgcgcgac cggctgtcga acgaggtccg
      721 cacgaacgct gcccagaccg aacggcaggc cgcgctgctg gcaaaggcgc gcgaggagtt
      781 ggaccagagc cagcagatct cgcaggacag tcagcgccgg gtcgcgctgc tgaacgaaca
      841 ggttgcatcg ctgacctcgc agcttggatc gttgcaggcg ctgctggaaa cggcgggcga
      901 tgatcagaaa caggccgaag tgagggtcga gacgctgggc cggcagttga acgccgccct
      961 gctgcgcgcg gccgaggaaa aagagcgccg gctggccctg gaacgggagg cacgcagcaa
     1021 ggccgaggca gaagccaagg atctggcccg ctatcggtcg gaattcttcg ggcaattgtc
     1081 gcagatcctg tcggggcgcg agggggtgaa ggtggtcggc gaccgcttcg tgttccagtc
     1141 cgagattctc tttcctccgg gcgaagccag cttgtcgccc gccggccgcg cccagatcgc
     1201 cggcgtcgtc cggatgctgg gagacatcgc cgacaagatc ccgcccgaaa tcgactggat
     1261 gatccgcgtg gacggtcata ccgacagcac gcccctgtcg ggcacgggcc gctaccggga
     1321 caattgggaa ctcagccagg cccgtgcgct ggccgtggtg cgcttcatga tcgacgaatt
     1381 gcagtttccg gcaaaccgcc tggcggcgac gggatttgcg gatacccgtc ccattaccga
     1441 cggcgcctcg cccgaggccc gcgcccagaa ccgccggatc gagctgaaac tgaccgagcg
     1501 ctgagggcgc cttgcctcgg ctcaatgccc cgccgtctgc gagaacaggt tgacgacgat
     1561 cacgcccgca acgatcagcc ccagcccgat gacggccggc aagtcaagcc gctgatgaaa
     1621 gacgaaaagg cagatcagcg ccacaagcac gatgccaagc gcactccaga tcgcataggc
     1681 gacgcccagg ggcaggacac gcaaggccag tgacagcagg tagaagctgg ccagatagca
     1741 gatggccatg cccagtgtcg gccacaaccg gctgaattgc tgcgagcgtt gcagaagcga
     1801 ggtgccaacc acttccagcg cgatcgccat ggccaggggc aggtagggcg atgccatcac
     1861 cccgccctgt cggctacttt ggccgaatcg tccaggccgg ccagttgctt catgtagcgt
     1921 tcgatctcgg aattgatttc ggccccgacc agcacgatca tcgcggccag ccacagccac
     1981 atcatcaggc cgatcaccgc gccgagcgag ccgtaggttt cattgtaatt ggcgaaattg
     2041 gcggcatacc acgagaacag gatcgaggtg acgactaggg tcacggcggc aaagatcgca
     2101 ccgggcgaaa tccagcgcca gcggcggttg ggcaccgccg gcccccagcg atagactgcc
     2161 gccagcgcca ccagagcacc aggaacatga tcggcca
//
LOCUS       DTVW01000631            1665 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1775789, whole
            genome shotgun sequence.
ACCESSION   DTVW01000631 DTVW01000000
VERSION     DTVW01000631.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1665)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1665)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1665
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1775789"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..541
                     /locus_tag="EYO87_08310"
     CDS             <1..541
                     /locus_tag="EYO87_08310"
                     /inference="COORDINATES: protein motif:HMM:PF00106.23"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HIC65985.1"
                     /translation="AAAQEHFGGLDILVNNAKGRFRYAPFEELSVEDWDTMFAVAVRG
                     SFLCAKAAAPVMRARGYGKIINLASGTVFKGAPGMLHYVTAKGALLAMTRSMSRELGA
                     DGICVNTLAPGLTLSENILGNTEIFNATARNAMIQSRALKREEVPDDLVGAVLFLASP
                     DSEFMTGQCLVVDGGSVNH"
     gene            516..992
                     /locus_tag="EYO87_08315"
     CDS             516..992
                     /locus_tag="EYO87_08315"
                     /inference="COORDINATES: protein motif:HMM:PF01042.19"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HIC65986.1"
                     /translation="MTAAASTIEITKGTESRNIHASHSKEETLMAEPRFNVERPTIEG
                     LNDPPHFSNAVVTEGGKMVHLSGQLSPEGDLAAQFKGVYDKLKIGLAACGASPSDVIR
                     QRVFVVDLVPEHRELVVAAMGEFYGGAKPASTLVGVPALILAGALVEIDVTAAIDG"
     gene            complement(1014..1205)
                     /locus_tag="EYO87_08320"
     CDS             complement(1014..1205)
                     /locus_tag="EYO87_08320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65987.1"
                     /translation="MLIGLIVEGAYTQETIVRSAIIAPLYLIAAQAGKMLFLSVPATW
                     FNKVAYVLLLASGTMALLA"
     gene            1429..>1665
                     /locus_tag="EYO87_08325"
     CDS             1429..>1665
                     /locus_tag="EYO87_08325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC65988.1"
                     /translation="MAHTPWVNGTSIVYVIDMPRVTVSITLEQVVRWGLDIDEVEACA
                     RRNLARYAPSLEVKIIESSEGGRVALLSAQDGYDA"
BASE COUNT          344 a          518 c          513 g          290 t
ORIGIN      
        1 cgccgcggcg caagaacatt tcggcggcct cgacattctg gtcaacaacg ccaagggccg
       61 cttccgctac gccccgttcg aggaattgtc ggtggaagat tgggacacca tgttcgccgt
      121 cgcggtgcgc ggcagtttcc tctgcgccaa ggcggcggcg ccggtcatgc gcgcccgcgg
      181 ctacggcaag atcatcaacc tggcgtccgg caccgtgttc aagggcgcgc ccggcatgct
      241 ccattacgtg accgccaagg gcgcgctcct cgccatgacc cgctccatgt cccgggaatt
      301 gggcgctgac ggtatctgcg tcaacaccct ggcgccggga ttgacgttaa gcgagaacat
      361 cctcggcaat acggaaatat tcaacgcaac cgcgcgcaac gcgatgattc aaagccgcgc
      421 cctcaagcgc gaagaagtgc ccgacgatct ggtcggcgcg gtcttgtttc tggcctcccc
      481 cgacagcgaa ttcatgaccg gccaatgcct ggtggttgac ggcggcagcg tcaaccattg
      541 aaataacgaa aggcaccgaa agccgaaaca tccacgcttc acattccaag gaggagacgc
      601 ttatggccga acccagattc aacgttgaac gcccgacaat cgagggcctg aacgatccgc
      661 cgcatttttc caacgccgtg gtcaccgaag gcggcaagat ggtgcatctg tcgggccagc
      721 ttagcccgga aggcgatctc gcggcccagt tcaagggtgt ttacgataaa ctgaagatcg
      781 gcttggcggc ctgcggggcg agcccgtccg atgtgatccg ccagcgggtg ttcgtggtcg
      841 atctggtgcc cgaacaccgg gaactggtgg tcgccgcgat gggcgaattt tatggcggcg
      901 cgaaaccggc gagcaccctg gtcggcgttc cggccctgat cctcgccggc gctctggtcg
      961 aaatcgacgt caccgccgcc atcgacggct aagcaggttc cgagccggca aattcaggca
     1021 agcagcgcca tcgtgccgga ggccagcagc aggacatagg cgactttgtt gaaccaggtg
     1081 gccggaaccg acaggaacag cattttgccg gcctgcgcgg cgatcaggta aagcggcgcg
     1141 atgatcgcgg atcggacaat cgtttcctgg gtgtatgccc cttcgacgat cagcccgatc
     1201 agcatgatgg tcaggagaac cgaaacggtc atgattatgt tggccctttg caccgggacc
     1261 ggcaccggcg ccgatagaaa atagaccacg aagaccggcc ccgagggaac gccgaacgcg
     1321 ccgattatca atccgctgac ccaaccgacg acggcgccgg aaataattcc gcgcggcccc
     1381 ttataggtcc aacccgactc gctcttcgat catctcgacc gtcagcaggt ggcgcatacg
     1441 ccgtgggtca acggcacatc gatcgtctac gtgatcgaca tgccccgcgt cactgtaagc
     1501 atcacgctcg aacaggtcgt tcggtggggg ctggacatcg atgaagtcga agcatgtgcg
     1561 cgtcgcaatc tggcgcgata cgcgccctcg ctggaagtca agatcatcga atcgagcgaa
     1621 ggtggccgcg tggcattgct gtcggctcag gatggctacg atgcc
//
LOCUS       DTVW01000632            1101 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1776173, whole
            genome shotgun sequence.
ACCESSION   DTVW01000632 DTVW01000000
VERSION     DTVW01000632.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1101)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1101)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1101
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1776173"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
BASE COUNT          319 a          186 c          211 g          385 t
ORIGIN      
        1 atttgacaaa acaaatagtc aaataggcac ggctataaca ttagatgttt cacataaact
       61 atttgatggt atctctgcta acttttcagc acttgggtat acaaacctag gcgataaaga
      121 agctacttac atggaaggtt ctgaaactgg agcatttttt aatgttgcta acttaactgg
      181 tacatttggt ggcacaacac ttgttgtagg tcgtcaactt cttgatacac ctatgcttgg
      241 tggatttgac tggttactag ctccaggtgc atttgaagct gcaactatag taaataaatc
      301 agtatctaat cttacacttg ttgcttctta tgtaaacaaa tggagaggta ataacacggg
      361 ttctacattt gcaaaattaa aagatgataa ctttgcagta ggtgcagctt attctgacgg
      421 ttttgatgca agcgtgtggt actacaatgt agatgtggct gattatacac aagtatatgc
      481 agatgcagga tatactttct ctaacgtgac acttaatggt caatatattg caactaacta
      541 ttctgcaggc gaagattcaa cagcatttgg tgtgaaagtt ggaactgaag tagctggtat
      601 caacctttct gctgcataca cagatgtttc tgatgctgca actggttttg ttggtgtaga
      661 ttcactttac acatcttctt ggaatgtatt tgcttcaact gtagtagatg cttcttggaa
      721 agttgctgca gcaggtaaaa tagtgggtat ttcaactgaa ctttcttatg ctggttacgg
      781 tgatgaaggt tcagagcttg actttatctt aggttatgat gctacagatg cacttaatct
      841 tggtgtagta tttactgcga ctgactatac atttgatgat gcttctgatg atgctgaaaa
      901 tgctcttgaa gtatttgcaa cttactcttt ctaatcatta tactttcata atcacccaaa
      961 atattttgaa gacaacactc tctgcaaaga gagtgtttgg gttttaactt cttttttata
     1021 tcttcatcta tctatacaaa ttctactatc actacatatt aagaaaatct attgatgact
     1081 ttttgcatca cttcttttgc a
//
LOCUS       DTVW01000633            4781 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1777118, whole
            genome shotgun sequence.
ACCESSION   DTVW01000633 DTVW01000000
VERSION     DTVW01000633.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 4781)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4781)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4781
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1777118"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(163..681)
                     /locus_tag="EYO87_08330"
     CDS             complement(163..681)
                     /locus_tag="EYO87_08330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017665122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 glutamine amidotransferase"
                     /protein_id="HIC65989.1"
                     /translation="MARILIMASDGYEQSELFVPLEKLRAAGHEVDIAAPEPGAIRAW
                     ATDDWGKSVEAGKGIAGVSAGDYDALVLPGGVINPDTLRHDDKAVDLIRDFSAASKPI
                     AAICHAPWLLIEAGLAKGRKMTGYVSIRTDIGNAGADVVDDSVVVDRGVITSRNPDDL
                     DDFVAAIEKAVA"
     gene            complement(745..3801)
                     /locus_tag="EYO87_08335"
     CDS             complement(745..3801)
                     /locus_tag="EYO87_08335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011750122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HIC65990.1"
                     /translation="MNFSTWSIRHPVPPIAVFLVLLVVGLFSFSRLPVTAMPNIDLPI
                     VSVTIAQPGAAPSELTSQVVQPVEDSISSITGVRHITSTATDSSASITVEFELETDSD
                     RAVNDVKDAVSTIRAELPESISEPIIQRVDVTGFPILTYAVSDPTQTIEGLSKFVDDV
                     IGRELSTVSGVAKTSRIGGAERQIKVDLDPDRLLAQGLTAAGISDQLRAKNIDMGGGR
                     GDLAGTEYSIRTLGAADSVAQLAATPIAIADGRTIRLDQLGDVTDGASDERSFALLDG
                     QPVVAFGVYRASGESDLGAGDGTKERLQQIRERYPNTRITLIDDSTTYTEASYTSAME
                     TLYEGAALAVIVVFLFLRNWRATLIAAVALPLSIIPTFFVMQWLGFTLNGISLLGITL
                     VTGILVDDAIVEIENIERHIGMGLPPYEASEEAAEEIGLTVIAISFSIVAVFAPVSFM
                     GGIPGQYFKQFGLTVAVSVLFSLLVARIITPMLAAYFMRGKVHDANRRDGFVMRGLMS
                     VCRWTMRHRGLTLLAGIAIFAGSIYSATLLPTEFIPAQDVGRSQIRLEMPPGSTIDET
                     ENGARRITAQIGEVPEVRSVFSYSDGSDVTEARVMINYGPKEDRERSQFDLEAQLKQR
                     LSDMPDMRINFQNENGENDLTISVLGTTEEGAALAAQRLASAMSRLPTLEGVTTSASL
                     QRPEIQILPKADIAAQLGVSASAMATTLRVATLGDTEANLAKFNTGDEQVPIVVRLNQ
                     AARDDLMRVQTLRVPSSAGQVPLATVADVTLSAGATEIGRYDRQYQTKVGANLADGSL
                     LGPVNAQVTELQNRIEMPPGTRIQAAGDAEIMGEVFGAFGTAMGAGVMLVYVVLVLLF
                     HNFVTPVTILLSLPLAIGGAILALFVTGNSISMAVVIGFLMLMGIVTKNSIMLVEFAL
                     TSMAGGTPKREAILDAVHKRARPIVMTTIAMSAGMVPSALATGEGGEFRAPMAIAVIG
                     GLILSTILSLLFVPSLFSVIHGGQRRIFGWIGYRLGLNRARDVVAE"
     gene            complement(3798..>4781)
                     /locus_tag="EYO87_08340"
     CDS             complement(3798..>4781)
                     /locus_tag="EYO87_08340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010395839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HIC65991.1"
                     /translation="DTLAAQLAQAEAEYQRARAGVGQARSNIDSAEASLTQAQTSLDR
                     ARRLREGGNASQSTLDDAVAAEANARAQAASARDGLAVAQAQLAQAEAARRIARLNLD
                     RATILAPVPGLVVARNAELGALAGASAEPLFSLIADGAVEMEAEVIETALRQLKMGDP
                     AEISAAGLGKVDGRVRLIPASVDPVTRLGLMRISLDAQAGLRTGLFASGWVITARRDA
                     VTVPATAVLSDSQGDRVQVVADGRVESRPVRAGLLWDGQREIVEGVTEGEQVIARSGA
                     FFRDGDQVRAISAEAATTAEAGTANEAGARAAAAIAPADDQSADAGQKARR"
BASE COUNT          803 a         1663 c         1512 g          803 t
ORIGIN      
        1 ctccttcgct tgcgcgtccc tgcactggaa cgaatctctt tcgcgccgga cgagcgtgcg
       61 ggaaaagagc ccggtcacgc ttttcagcgc ggaacgcccc gcgccattcg tcccggtagg
      121 ttcggatcga aaccagacag tcccgcccgt cgcgggatgc aatcaggcca cggccttctc
      181 gatcgcggcc acgaaatcgt ccagatcgtc cggattgcgg ctggtgatca cgccgcgatc
      241 caccaccacg ctgtcatcga ccacatccgc cccggcattg ccgatatctg tgcggatcga
      301 gacatagccg gtcattttcc gaccctttgc caaccccgcc tcgatcagca gccagggtgc
      361 atggcagatc gcggcgatag gctttgaggc ggcggaaaag tcgcggatca ggtcgacggc
      421 cttgtcgtca tgccgcagcg tatcggggtt gatgaccccg cccggcagga ccagcgcgtc
      481 gtaatccccg gccgaaacgc cggcgatgcc tttcccggcc tcgaccgact tgccccagtc
      541 atccgtcgcc caggcgcgaa tggcgcccgg ttccggggcc gcgatatcga cctcgtgccc
      601 ggccgccctc agtttttcca gcggaacgaa cagttccgat tgttcgtatc catccgacgc
      661 catgatgaga atcctggcca tggaaacagc tccttccttg acgttgcggg gtccaatgcg
      721 cccgcgacgc cggcggttcc accgctattc ggcaaccacg tcccgcgccc ggttcagacc
      781 gaggcgataa ccgatccacc cgaagatgcg ccgctgcccg ccatggatga ccgagaacag
      841 cgagggcacg aacagcaacg acaggatcgt ggacaggatc agtccgccga tcaccgcgat
      901 ggccatgggc gcccggaatt ctccgccctc gccggtcgcc agcgccgaag gcaccatgcc
      961 cgcgctcatc gcgatggtgg tcatgacgat gggccgcgcg cgcttgtgca cggcgtccag
     1021 gatggcctcg cgcttcgggg tgcctccggc catcgaggtc agcgcgaact ccaccagcat
     1081 gatcgagttc ttggtgacga tccccatcag catcaggaac ccgatcacca ccgccatgct
     1141 gatcgaattg ccggtcacga acagcgccag gatcgcgccg ccgatggcca gaggcagcga
     1201 cagcaagatc gttaccggcg tcacgaagtt atgaaacagc agcaccagaa cgacatagac
     1261 cagcatcacg cccgcgccca tcgcggtgcc gaaggcgccg aaaacctcgc ccatgatctc
     1321 ggcatcgccc gcggcctgga tccgtgttcc gggcggcatc tcgatccggt tctgcaattc
     1381 ggtcacctgg gcattgaccg gccccagcag cgagccatcg gcaagattgg cgccgacctt
     1441 ggtctggtat tgccggtcat agcgcccgat ctcggtcgcg ccggccgaca gggtgacatc
     1501 ggccaccgtg gccagcggca cctgcccggc cgagcttggc acacgcaggg tctgaacccg
     1561 catcaggtcg tcgcgggcgg cctggttcag ccgcacgacg atgggcacct gctcgtcgcc
     1621 ggtattgaac ttggcgaggt tcgcctcggt atcgcccagc gtggcaaccc gcagcgtcgt
     1681 cgccatggcg ctggcggaca cgccaagctg ggccgcgata tcggccttgg gcaggatctg
     1741 gatctcgggg cgctgcaggc tggccgaggt cgtcacgccc tccagcgtcg gcagccggct
     1801 catcgccgag gccagacgct gggcggccag tgccgcgccc tcctcggtcg tgcccagaac
     1861 gctgatcgtc aggtcgttct cgccgttctc gttctggaaa ttgatccgca tgtcgggcat
     1921 gtccgacaga cgttgcttca gctgcgcctc aaggtcgaat tgcgacctct cgcgatcttc
     1981 cttggggccg taattgatca tcacccgcgc ctcggtgacg tcgctgccat ccgagtagct
     2041 gaagaccgac cggacctcgg gcacctcgcc gatctgcgcg gtgatccggc gggcgccgtt
     2101 ctcggtctcg tcgatggtcg agccgggcgg catttccagc ctgatctggc tgcggccgac
     2161 atcctgcgcc gggatgaatt cggtcggcag cagggtcgcg gaatagatcg aacccgcgaa
     2221 gatcgcgata ccggcaagca gcgtcagccc gcgatggcgc atggtccagc ggcagaccga
     2281 catcaacccg cgcatgacga atccgtcgcg acggttcgcg tcatggacct tgccgcgcat
     2341 gaaataggcc gccagcatcg gcgtgatgat ccgcgccacc agcagcgaga acaggaccga
     2401 caccgcgaca gtcaggccga actgcttgaa atactgcccc ggaatcccgc ccatgaagct
     2461 gaccggcgcg aaaactgcga cgatggaaaa gctgatcgcg atgaccgtca ggccgatctc
     2521 ttccgcggct tcctcgctgg cctcgtaggg cggcaggccc atgccgatat ggcgttcgat
     2581 gttctcgatc tcgacgatgg catcatcgac aaggatgccg gtgaccagcg tgatccccag
     2641 aaggcttatc ccgttcaggg taaaacccag ccactgcatc acgaagaagg tcgggatgat
     2701 cgacaagggc agcgcgacgg cggcaatcag cgttgcacgc cagttgcgca ggaacaggaa
     2761 caccacgatt accgccagcg ccgcaccttc atacagcgtc tccatcgcgc tggtatagct
     2821 ggcttcggta taggtggtcg aatcgtcgat cagggtgatg cgggtattgg ggtaacgctc
     2881 gcggatctgc tgcagccgtt ccttggtgcc gtcgcccgcg cccagatcgg attcgcccga
     2941 ggcgcgatag accccgaagg ccacgaccgg ctggccatcc agcagcgcaa agctgcgttc
     3001 gtcgctggcg ccatccgtga cgtcgcccag ttgatccagc cggatcgtgc ggccgtccgc
     3061 gatggcgatg ggggtggcgg ccagttgcgc cacgctgtcg gcggctccca gcgtgcggat
     3121 ggaatattcg gtcccggcca gatcgccccg gccaccgccc atgtcgatgt tcttggcccg
     3181 caactgatcc gagatcccgg ccgccgtcag accctgcgcc agcagccggt cgggatccag
     3241 atcaaccttg atctggcgtt cggccccgcc gatccgcgag gtcttggcga cgccgctgac
     3301 ggtggacaat tcgcgcccga tcacgtcatc gacgaatttc gacaggccct cgatggtctg
     3361 ggtcgggtcg ctgaccgcat aggtcaggat cggaaagccg gtcacatcga cgcgctggat
     3421 gatgggttcg ctgatgcttt cgggcagttc ggcccggatc gtcgagaccg cgtccttgac
     3481 atcgttgacc gcgcggtcgc tgtcggtttc cagttcgaat tcgacggtga tgctggcgct
     3541 gctgtcggtc gccgtcgagg tgatgtgccg caccccggtg atcgaggaaa tgctgtcctc
     3601 gacaggctgg accacctggc ttgtcagttc cgagggcgcg gcaccgggct gggcgatggt
     3661 cacgctgacg atgggcaggt cgatattcgg catcgccgtc accggcagcc gcgaaaagct
     3721 gaacaatccg acgaccagca acaccagaaa aaccgcgatg ggcggcaccg ggtggcggat
     3781 cgaccaggtc gagaaattca tcgccgtgcc ttctgaccgg catcggccga ttgatcgtcg
     3841 gccggcgcaa tcgccgccgc cgcccttgca ccagcttcat tcgcagtccc ggcctcggcc
     3901 gttgtcgcgg cctcggccga gatcgcccgc acctgatcgc cgtcacggaa gaatgcaccc
     3961 gaccgcgcga tcacctgttc gccctcggtc actccctcga cgatctcgcg ctggccatcc
     4021 catagcagcc cggcccggac cgggcggctt tcgacgcggc catcggccac gacctgaacc
     4081 ctgtcgcctt gggaatccga cagaaccgcc gttgccggca ccgtcaccgc gtcgcggcgg
     4141 gcggtgatga cccagccgct ggcgaaaagg cccgtgcgca gtcccgcctg cgcatccagc
     4201 gagatccgca tcaggccaag ccgcgtgacc ggatcgaccg aggccgggat cagccgcacc
     4261 cggccatcga ccttgcccag acccgccgcg ctgatttcgg ccggatcgcc catcttcaac
     4321 tgccgcagcg cggtctcgat cacctcggcc tccatctcga cggcgccatc ggcgatcagg
     4381 ctgaacaggg gttccgcgga ggcgccggca agcgcgccca gttcggcgtt ccgcgccacg
     4441 accagccccg ggaccggcgc caggatcgtc gcccggtcca ggttgagcct ggcgatgcgg
     4501 cgcgcggctt cggcctgggc cagctgcgcc tgggcgacgg ccagcccgtc gcgggccgat
     4561 gcagcctgcg cccgcgcatt cgcctcggcc gcgaccgcgt cgtccagggt cgattgcgat
     4621 gcgttcccgc cctcgcgcag cctgcgggcg cgatccagcg atgtctgggc ctgggtcagc
     4681 gaagcctcgg cgctgtcgat gttgctgcgc gcctggccga ccccggccct ggcgcgctga
     4741 tattcggcct cggcctgggc cagctgcgcc gccagcgtat c
//
LOCUS       DTVW01000634            2334 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1778009, whole
            genome shotgun sequence.
ACCESSION   DTVW01000634 DTVW01000000
VERSION     DTVW01000634.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2334)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2334)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2334
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1778009"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..167)
                     /locus_tag="EYO87_08345"
     CDS             complement(<1..167)
                     /locus_tag="EYO87_08345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HIC65992.1"
                     /translation="MSDASDPVAGRWRALALICAGVVGAMTCWFSATAVVPDLIVAWN
                     LSQGQAAWLTNA"
     gene            complement(187..735)
                     /locus_tag="EYO87_08350"
     CDS             complement(187..735)
                     /locus_tag="EYO87_08350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009506483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NYN domain-containing protein"
                     /protein_id="HIC65993.1"
                     /translation="MFYKDDRLAIFIDGANLYAAAKALGFDIDYKLLRQEFDRRGKLM
                     RAYYYTALMESEEYSPIRPLVDWLHYNGYCVVTKPAKEYIDPMGRRKVKGNMDIELAV
                     DAMELAPRLDHAVLFSGDGDFRPLIEALQRQGVRVSVVSTIRSQPPMIADELRRQADN
                     FIELDALRDIIGRPPREGQAET"
     gene            843..1436
                     /gene="folK"
                     /locus_tag="EYO87_08355"
     CDS             843..1436
                     /gene="folK"
                     /locus_tag="EYO87_08355"
                     /EC_number="2.7.6.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020040676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HIC65994.1"
                     /translation="MVNLSFGFGAVGANLPSAAGSAGQTLRVAARILHSEQHISITAI
                     SRFWRTPAVPAGSGPDYCNAAFCFSTILPAEAVLARFHAIEARFGRDRGTGRWSARVL
                     DLDLLALADRIAPDPETLAHWIGLPPDRQGCEAPDRLILPHPRIQDRGFVLAPLAEIA
                     PGWRHPLTGRSVAAMLAGLGPGGLAGMQPLSPESLDI"
     gene            1504..1857
                     /locus_tag="EYO87_08360"
     CDS             1504..1857
                     /locus_tag="EYO87_08360"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007426757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit omega"
                     /protein_id="HIC65995.1"
                     /translation="MARVTVEDCVDKVPNRFDLVMLASHRAREIAAGSPPTVDRDNDK
                     NPVVALREIADETQPVDDLRERMIESTQTQIEVDEPEEDAMALLLGTEVDRPKPADEE
                     SEERMLRMMLEANQR"
     gene            1888..>2334
                     /locus_tag="EYO87_08365"
     CDS             1888..>2334
                     /locus_tag="EYO87_08365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_351719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional (p)ppGpp
                     synthetase/guanosine-3',5'-bis(diphosphate)
                     3'-pyrophosphohydrolase"
                     /protein_id="HIC65996.1"
                     /translation="MIDVEDLIALVRNYNPRSNADLIREAYEYGMRMHEGQFRHSGEP
                     YFTHPIAVAAILTEMRLDDATIVTALLHDTVEDTRSTKEEIVTIFGPEIADLVDGVTK
                     LTNLQLSNTQSRQAENFRKLFMAMSRDLRVILVKRADRLHNMRTIRS"
BASE COUNT          433 a          766 c          730 g          405 t
ORIGIN      
        1 gcgttggtca gccaggccgc ctgaccctgc gacagattcc acgccacgat cagatccggc
       61 acgacggccg tggccgagaa ccagcaggtc atcgccccga cgacgccggc gcagatcagc
      121 gccagtgccc tccagcgccc ggcgacggga tcggacgcat cgctcatggg ggcggtcggc
      181 gtcgcatcag gtttcggcct gaccctcgcg cgggggccgg ccgatgatgt cgcgcagtgc
      241 atcgagttcg atgaaattgt cggcctgacg gcgcagctcg tccgcgatca tcggcggctg
      301 cgagcggatg gtcgagacga ccgaaacccg cacgccctga cgctgcaacg cctcgatcag
      361 ggggcggaaa tcgccgtcgc cggaaaacag gacggcgtgg tccagccggg gcgcaagctc
      421 catcgcatcc accgccagtt cgatatccat gttgcccttg acctttcgcc gacccatcgg
      481 atcgatatat tccttggccg gcttcgtgac cacgcaatag ccgttatagt gcaaccaatc
      541 gacgagggga cggatcgggg aatattcctc gctttccatc agggcggtat agtaataggc
      601 ccgcatcagc ttgccccgac ggtcgaactc ttgccgcagc agcttgtaat ctatatcgaa
      661 accaagcgcc ttcgcggcgg catagagatt ggctccatct atgaagatgg ccagccggtc
      721 gtccttgtaa aacattctgt gttgccttca atggatcttt cttgctcccg gcggtcgcgg
      781 atcagagtga ggggcctgat tgttccggac cggccggaac gtcttaggac agaaggactg
      841 acatggttaa cctgtctttc ggtttcggtg cagtcggcgc caatctgccc tcggctgcgg
      901 gcagtgccgg tcagacactg cgcgtggctg cgcgcattct gcatagtgaa caacacattt
      961 caataacggc gatcagccgc ttctggcgga cacccgccgt tcccgccgga tcgggcccgg
     1021 attattgcaa cgctgccttc tgcttcagca cgatcctgcc ggccgaggcg gttctggccc
     1081 ggtttcatgc catcgaggcc cggttcggac gggaccgcgg aaccgggcgc tggtcggcgc
     1141 gggtgctgga tcttgatctt ctcgcgctgg ccgaccggat cgcgccggac cccgaaaccc
     1201 tggcgcactg gatcggcctg ccgcccgacc ggcaggggtg cgaggcgccc gaccgcctga
     1261 tcctgccgca tccgcggatt caggaccgcg gtttcgtgct tgcgccgctg gccgagatcg
     1321 cgccgggatg gcgccatccg ctgaccgggc gcagcgtggc ggccatgctg gccggcctgg
     1381 gacccggcgg gctggccgga atgcagccgc tttcccccga aagccttgac atttgacccc
     1441 tcggccatca gttatccggt ttcgctctgg atacccgatt cgcagtttag cacaggtgat
     1501 gacatggccc gcgtaaccgt cgaagattgc gtcgacaagg ttcccaaccg gttcgatctg
     1561 gtgatgctcg cctcgcatcg cgcgcgagaa atcgccgcag gcagcccgcc cacggtggac
     1621 cgcgacaacg acaagaaccc ggtcgtcgcc ctgcgcgaga tcgctgacga gacccagccg
     1681 gtcgacgacc tgcgcgagcg gatgatcgaa tcgacccaga cccagatcga ggtggatgag
     1741 cccgaagagg atgcgatggc gctgttgctg ggcacggaag tggaccgccc caagcccgcc
     1801 gacgaggaat ccgaggaacg gatgctgcgc atgatgctgg aagccaacca gcgctagggc
     1861 agaggcgaac gaggtcttcg gcaggacatg atcgacgtcg aagacctgat cgcgctggtc
     1921 cgcaactaca acccgcgcag caatgcagac ctgatccgcg aagcctatga atacgggatg
     1981 cggatgcacg agggtcagtt ccgccattcc ggcgagccct atttcaccca tcccatcgcc
     2041 gtcgccgcca tcctgaccga gatgcggctg gacgacgcga ccatcgtgac cgccctgctg
     2101 cacgacacgg tcgaggacac gcgatcgacc aaggaagaga tcgtcaccat cttcggcccc
     2161 gagatcgccg atctggtcga tggcgtgacc aagctgacca atctgcaact cagcaacacc
     2221 cagtcccggc aggccgagaa tttccgcaag ctgttcatgg ccatgtcgcg cgatctgcgc
     2281 gtgatcctgg tcaagcgggc cgaccggctg cacaacatgc gcacgatccg gtcc
//
LOCUS       DTVW01000635            2256 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1778489, whole
            genome shotgun sequence.
ACCESSION   DTVW01000635 DTVW01000000
VERSION     DTVW01000635.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2256)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2256)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2256
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1778489"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(61..714)
                     /gene="nth"
                     /locus_tag="EYO87_08370"
     CDS             complement(61..714)
                     /gene="nth"
                     /locus_tag="EYO87_08370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007425437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HIC65997.1"
                     /translation="MARLPAPLPFDQQVAIFSRLREANPRPESELNFSNPFTLVVAVA
                     LSAQATDLGVNKATRELFAVADTPRKMLDLGLDGLTGHIRTIGLYRQKARNVIALSRI
                     LVEEYGGVVPDSRAALMSLPGVGRKTANVVLNSAFGQPAQAVDTHIYRVGNRTRIAPG
                     RDVGEVERAIEDNVPARFQRHAHHWLILHGRYICQARRPRCGICIFRDLCPYEEKTE"
     gene            944..1630
                     /locus_tag="EYO87_08375"
     CDS             944..1630
                     /locus_tag="EYO87_08375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010394062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HIC65998.1"
                     /translation="MKIRVTTILAASGLIALGACTDPSLNGGTSGAGTGPGGLSRTQQ
                     GALAGAAIGAVLGGTRDEDKNNRGRDAARGAILGAAAGAVAGNILDRQAAALEQAVQN
                     PNVQIVNRGSYLQVTLPEGILFATDSAAVSGPAQNDLYAVARNLNQYPDSRVEVVGHT
                     DDTGSAAYNQDLSERRARSVAGILTAGGVSPARVLAVGRGESQPVASNATAQGKAQNR
                     RVEILIRPTR"
     gene            complement(2014..>2256)
                     /locus_tag="EYO87_08380"
     CDS             complement(2014..>2256)
                     /locus_tag="EYO87_08380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010394063.1"
                     /note="produces ATP from ADP in the presence of a proton
                     gradient across the membrane; subunit B is part of the
                     membrane proton channel; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP F0F1 synthase subunit B"
                     /protein_id="HIC65999.1"
                     /translation="EAEAQAAKAKEDLKISIERRLKAAEEQIASAESDAVRAVRDRAV
                     RTAVAAASELLAQQVAAGQRSAGIDDAIEDVARRLN"
BASE COUNT          376 a          765 c          763 g          352 t
ORIGIN      
        1 cctatgtcat cgcgatcacg tccatgacgg cattgccgat cccgatgaca tagggcgtgg
       61 tcattcggtc ttctcctcat agggacacag gtcgcggaag atgcagatgc cgcagcgggg
      121 gcggcgggcc tggcagatat agcgcccatg caggatcagc caatgatggg cgtggcgctg
      181 aaagcgggcg ggaacgttgt cctcgatcgc gcgctcgacc tcgcccacgt cgcggccggg
      241 cgcgatgcgg gtgcggttgc cgacgcggta gatatgcgta tccaccgcct gcgccggctg
      301 accgaaggcg ctgttcagca cgacattggc ggtcttgcga ccgaccccag gcaggctcat
      361 cagcgcagcg cggctgtcgg ggacgacgcc gccatattcc tcgaccagga ttcgcgacag
      421 cgcgatgacg ttcctggcct tctgccgata aagcccgatg gtccggatat gcccggtcaa
      481 gccatccagc cccagatcca gcatcttccg gggcgtgtcg gccaccgcga acaattcccg
      541 cgtggccttg ttcaccccca gatcggtcgc ctgcgccgac agcgcgacgg ccacgaccag
      601 cgtgaaggga ttcgagaaat tcagttcgct ctcgggccgg ggattggcct cgcgcagccg
      661 cgaaaagatc gcgacctgct gatcgaaggg caagggggcg ggcagacggg ccatgacgcg
      721 gtgcttgtga cgccggtcgc gcggctttgc aagccaggtg ttcccgcgtc gcgattctca
      781 ccggattgtg ccgacaatcc agccacttcc acgcggacgt gactttcctt ccggcgggaa
      841 ctgcgacagc gtgacgcgcg ttggaaggcg gtcccgcgcg gggtccgctg gtcttcggcc
      901 cggcgccagg caagggcctt gacgaacaag gaaggggaat cccatgaaga ttcgcgtcac
      961 cacgatcctc gccgcatcgg gcctgatcgc cctcggcgcc tgcaccgatc cctcgctgaa
     1021 cggcggcacg tccggcgccg gcacaggccc cggcggcctg agccgcaccc agcaaggtgc
     1081 cctggccggt gcggcgatcg gcgccgtgct gggtggcacg cgcgacgagg acaagaacaa
     1141 ccgcggccgc gacgccgcac ggggcgcgat cctcggcgcg gcggcagggg ccgtcgcggg
     1201 caatatcctc gaccgccagg cggccgcgct ggaacaggcg gtgcagaacc cgaacgtgca
     1261 gatcgtcaac cgcggctcgt atctgcaggt gaccctgccc gaagggattc tgttcgccac
     1321 cgattcggcc gccgtctctg gcccggcgca aaacgatctc tatgctgtcg cgcgcaacct
     1381 gaaccagtat cccgacagcc gcgtcgaggt ggtgggtcac accgacgata ccggcagcgc
     1441 cgcctataac caggatctgt cggaacgccg cgcccggtcg gtcgcgggca tcctgacggc
     1501 aggcggcgtg tcgcccgcgc gcgtcttggc cgtgggtcgc ggcgaaagcc aacccgttgc
     1561 ctcgaatgcg acggcgcagg gcaaggcgca gaaccgccgt gtcgaaattc tgatccgccc
     1621 gacccgctga tcgcggagga cggaacacag gattggcaag ggccggtttc gaccggccct
     1681 ttcatgttga atttccgggc aaccgaccgg caagaaatcg cggaaatccg cgccacgacg
     1741 ttgcgtcgcg aaccctccga cgcgcgaaga gttgtagtct ggtggaggcg atcgctgtaa
     1801 aagccgcacc tgccccgtat cggacagccg gccccgggcg agccctgtgc aggttcggcg
     1861 cggacatccg acccgcccgg gcatgccgcc acagcccgat cgccgcatgt cggtggccgg
     1921 ccgattcgtc cgtgtgagca gacgcgagac gcggacgagg aaacccccgg ccatgcggcc
     1981 gggggttttt cactgtccga ctgaacgaaa ggctcagttc aggcgacgcg ccacgtcttc
     2041 gatggcgtca tcgataccgg ccgaccgctg ccctgcggcg acctgctgcg ccagaagttc
     2101 ggatgcggcg gcgacggcgg tgcggaccgc gcggtcgcgg acggcacgaa ccgcatcgct
     2161 ttcggcgctg gcgatctgtt cctcggcggc cttcaggcga cgctcgatcg agatcttcag
     2221 atcttccttg gccttggcgg cctgcgcctc ggcctc
//
LOCUS       DTVW01000636            1561 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1782426, whole
            genome shotgun sequence.
ACCESSION   DTVW01000636 DTVW01000000
VERSION     DTVW01000636.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1561)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1561)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1561
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1782426"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..910)
                     /locus_tag="EYO87_08385"
     CDS             complement(<1..910)
                     /locus_tag="EYO87_08385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-polyprenylphenol 6-hydroxylase"
                     /protein_id="HIC66000.1"
                     /translation="MRGPHNILRLIRTGATFERTGAMGAVLDAVEAPPRLRLAARVLG
                     WPFRWLGYPGDPALPPITRAITALGPAYIKFGQILSTRADVVGIELAEQLRMLQDRLP
                     PFPTAIAQQIVAADLRRPVDALFSEFSEPVAAASIAQVHRARVRETGQEVAVKVLRPN
                     IGAAFRRDIDAFHFAASIIEFLSPGSRRLRPRDVVSHFEGVVTAEQDMRLEAASASEF
                     AENTRGDEAFQVPLPHWQLSARRVLTSDWAEGLPMGDPQALIAAGHDTTRIATRVIQL
                     FLQHALRDGFFHADMHHGNLKVASNGD"
     gene            complement(914..>1561)
                     /locus_tag="EYO87_08390"
     CDS             complement(914..>1561)
                     /locus_tag="EYO87_08390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_354420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HIC66001.1"
                     /translation="YDLMNDLMSAGVHRLWKNAMMDWLAPRGGQHLLDVAGGTGDIAF
                     RFLDRAPQARVTVCDMTESMLIEGRKRADAADRGDRLAWVTGDAMALPFPDSSFDRYT
                     ISFGIRNVTRIPDALAEAYRVLRPGGRLMVLEFSRLPVPAMQWAYDRYSFNVIPAMGQ
                     AVTGDRDSYQYLVESIRKFPDQEAFGALIREAGFGRVQWRNLSMGIAALHSGWKL"
BASE COUNT          269 a          540 c          518 g          234 t
ORIGIN      
        1 catccccgtt cgacgcaacc ttcaggttgc cgtgatgcat gtccgcgtgg aagaacccgt
       61 cccgcagggc atgttgcagg aacagctgga tcacccgcgt ggcgatccgg gtcgtgtcgt
      121 ggcccgccgc gatcagcgcc tgcggatcgc ccatcggcaa cccctcggcc cagtccgagg
      181 tcagcacccg gcgcgccgac aattgccaat gcggcagcgg cacctgaaac gcctcgtcgc
      241 cgcgcgtgtt ctcggcgaat tccgaggccg aggcggcttc cagccgcatg tcctgttctg
      301 ccgtcaccac gccttcgaaa tggctgacca cgtcgcgcgg acgcaggcgg cggctgccgg
      361 gcgacaaaaa ttcgatgatc gaggcggcaa agtgaaaggc gtcgatgtca cggcggaagg
      421 cggcaccgat attggggcgc agcaccttga ccgcgacctc ctgcccggtt tcgcgcaccc
      481 gcgccctgtg cacctgcgcg atcgaggcgg cggcgaccgg ttcggaaaac tcgctgaaca
      541 acgcatcgac cggccggcgc aaatcggccg cgacgatctg ctgggcgatc gccgtcggaa
      601 agggcggcag ccgatcctgc aacatccgaa gctgttcggc cagttcgatc ccgaccacat
      661 cggcgcgcgt cgacaggatc tggccgaact tgatataggc cggtccaagc gcggtgatcg
      721 cgcgggtgat cggcggcagg gcgggatcgc ccggatagcc cagccagcgg aacggccagc
      781 ccagcacccg cgcggccagc cgcaggcggg gcggcgcctc gaccgcgtcc agaaccgcgc
      841 ccatcgcgcc ggtgcgttcg aaggtggcgc cggttcggat caggcgcagg atattgtgcg
      901 ggccgcgcat gggctacagt ttccagccgg aatgcagcgc ggcgattccc atcgacaggt
      961 tgcgccactg gacccgcccg aaacccgcct cgcggatcaa tgcgccgaac gcctcctgat
     1021 cgggaaactt gcggatcgat tcgaccagat attgatagct gtcgcgatcg ccggtcaccg
     1081 cctgccccat cgccgggatg acgttgaagc tgtagcggtc ataggcccac tgcatcgcgg
     1141 gcaccggcag ccggctgaat tccagcacca tcagccgccc gccgggacgc aggacgcgat
     1201 atgcctcggc cagcgcgtcg gggatgcggg tgacattgcg gatgccgaag ctgatcgtgt
     1261 agcgatcgaa gctgctgtcg ggaaagggca gcgccatcgc atcgcccgta acccaggcca
     1321 ggcgatcacc cctgtcggcc gcatcggcgc gcttgcgccc ctcgatcagc atcgattcgg
     1381 tcatgtcgca gacggtgacg cgcgcctgcg gcgcgcgatc cagaaagcgg aaggcgatgt
     1441 cgccggtgcc gcccgcgacg tccagcaggt gctggccgcc gcgcggcgcc agccaatcca
     1501 tcatcgcgtt cttccacagc cggtggacgc ccgcgctcat caggtcgttc atcaggtcgt
     1561 a
//
LOCUS       DTVW01000637            1374 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1783058, whole
            genome shotgun sequence.
ACCESSION   DTVW01000637 DTVW01000000
VERSION     DTVW01000637.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1374)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1374)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1374
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1783058"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..334
                     /locus_tag="EYO87_08395"
     CDS             <1..334
                     /locus_tag="EYO87_08395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008830812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="competence/damage-inducible protein A"
                     /protein_id="HIC66002.1"
                     /translation="RYDNIFIMAGVPSITAGMLDALSGQLEGGAPLLAETIGCWVAES
                     EVADVLRETEQEFDTCQIGSYPFWAEGRTGANFVIRSVSADDLASCTRALVRRLEAID
                     KPAIAGGI"
     gene            358..885
                     /locus_tag="EYO87_08400"
     CDS             358..885
                     /locus_tag="EYO87_08400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008830813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66003.1"
                     /translation="MAAPAMEHPAQPTLDAFEAVLRRHDSATLALEEWCAMRGMANPA
                     EVTAHGTKAPAGAPPAEARAHLALQDDETVAMRNVRLTCGPAVLSVAWNWYVPARLTP
                     EMNAALEGSDAPFGKVVAPLNFRRQPLENVRGRAEGCPQGTISTHRAMLVLPDGRPLA
                     YLIECYTAANLADSL"
     gene            complement(910..>1374)
                     /locus_tag="EYO87_08405"
     CDS             complement(910..>1374)
                     /locus_tag="EYO87_08405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008830814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HIC66004.1"
                     /translation="GGETEFASTYAAYEGLPEEEKQALEGLKAEHSVKASLSPIADAI
                     PEKHRERVLGIGLVKEHPVVWTHEDGRKSMVIGTTADHIVGMDIPAGRAMLVRLQEWA
                     AQPAFSLRHKWTKGDFVIWDNTGAMHRAIPYEKSTGRMMHRTSIAGTEAVAA"
BASE COUNT          222 a          484 c          433 g          235 t
ORIGIN      
        1 ccgctacgac aacatcttca tcatggccgg tgtgcccagc atcacggcgg gcatgctcga
       61 tgcgctctcg gggcagctcg aaggcggcgc accgctgctg gccgagacca tcggctgctg
      121 ggtcgccgaa agcgaagtgg ccgacgtgtt gcgtgagacc gaacaggaat tcgacacctg
      181 ccagatcggc tcctatccgt tctgggccga gggccggaca ggcgccaatt tcgtcatccg
      241 ttcggtcagc gccgacgatc tcgcctcctg cacacgcgct ctggtgcgcc gcctggaagc
      301 gatcgacaaa cctgccatcg ccgggggaat ctgagtttgc tcgtgccgat cgttgcgatg
      361 gcagcccccg cgatggaaca ccccgctcaa ccgaccctgg acgccttcga ggcggtgcta
      421 cgccgtcacg acagcgctac cctcgcgctt gaggagtggt gcgccatgcg cggcatggcc
      481 aatccggccg aggtaaccgc tcacggcacc aaggcacctg cgggagcacc gccggccgaa
      541 gcccgcgcgc accttgcact gcaagacgac gaaacggtgg ccatgcgcaa cgtccggctg
      601 acctgcggac cggccgtgct ctccgtggcc tggaactggt atgtccccgc gcggctcacg
      661 ccggaaatga acgcggcgct cgaaggcagc gacgcgccgt tcggcaaggt cgttgctccg
      721 ctgaactttc ggcggcaacc gctcgaaaac gtgcgcggcc gggccgaggg ctgcccccaa
      781 gggaccatct ccacgcaccg cgccatgctg gtcctgcccg acgggcggcc gctggcctac
      841 cttatcgagt gctataccgc cgcgaacctg gccgacagcc tctaggcgag gccgccggcc
      901 gctttacggt caggccgcta ccgcctcagt gcccgcgatc gaggtgcggt gcatcattcg
      961 gccggtcgat ttttcgtagg ggatcgcccg gtgcatcgcg ccggtgttgt cccagatcac
     1021 gaagtcgccc ttcgtccact tgtgccgcag cgagaaggca ggctgggcgg cccattcctg
     1081 cagccgtacc agcattgcgc ggccagccgg gatatccatg ccgacgatgt gatcggcggt
     1141 cgtgccgatt accatcgact tgcgcccgtc ctcatgcgtc cacaccaccg gatgctcctt
     1201 cacgagaccg atgccaagca cgcgttcgcg gtgcttttcg gggatcgcat cggcaatcgg
     1261 cgagaggctg gccttgaccg aatgctcggc cttgagccct tccagcgcct gcttctcttc
     1321 ctcgggcaac ccttcgtagg cagcataagt gctggcgaac tcggtctcgc cgcc
//
LOCUS       DTVW01000638            1701 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1783470, whole
            genome shotgun sequence.
ACCESSION   DTVW01000638 DTVW01000000
VERSION     DTVW01000638.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1701)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1701)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1701
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1783470"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..960)
                     /gene="ftsA"
                     /locus_tag="EYO87_08410"
     CDS             complement(<1..960)
                     /gene="ftsA"
                     /locus_tag="EYO87_08410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010397988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HIC66005.1"
                     /translation="MVELYQTQRAMRNIRRAALQRGVVGILDIGTSKIACLVLKFDGT
                     GTDREVDGVGPMAGQANFRVIGAATTRSRGMRRGEIDTMAETERAIRTVVAGAQKVAG
                     CRVDHVIACMSGGRPASYGLDGEIVLESGKVSEHDVASVLAACETPDFGRGREVLHAQ
                     PVNFAVDNRSGLSDPRDHVGNRLACDMHVLTVDEDVIGNLVQCIRRCDLELAGVASAA
                     YASARAALVEDEQELGAACIDFGGGGTGVSVFIKKHMIFSDNVQIGGNLITQDIVQGL
                     RVPLAVAERLKTLNGGVEATGRDDRDMIAVGGETGDWEADRRVV"
     gene            complement(967..>1701)
                     /locus_tag="EYO87_08415"
     CDS             complement(967..>1701)
                     /locus_tag="EYO87_08415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010397986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsQ"
                     /protein_id="HIC66006.1"
                     /translation="GAGVAGLVDKVQSREEFQVRMMTIEGASPVVDKALRGMLPVDLP
                     ASSFDIDLTAMRLQVMQLDAVESIDLRIKPGGILSAVVKERVPALLWRHAAGIDILDA
                     TGNRVASVTSRDVRPDLPLIAGDGADLETQEALQLLDAAGPILPRVRGLVRRGERRWD
                     LVLDNNQRIMLPEEGAVIALQAAVALNRSQDMLGRDIQVVDLRSPSRPVLRLGIDARN
                     SIRKARGLPLLGPDGNVLDEDDRKRG"
BASE COUNT          276 a          631 c          515 g          279 t
ORIGIN      
        1 gacgacgcgg cggtcggcct cccagtcgcc tgtctctccg ccgacggcaa tcatgtcgcg
       61 gtcgtcgcgg ccggtcgcct cgaccccgcc gttcagcgtc ttcaaccgct cggccaccgc
      121 cagcggcacg cgcagcccct ggacgatatc ctgtgtgatc aggttaccgc caatctgaac
      181 attgtccgag aagatcatgt gtttcttgat gaaaacagat acgcccgtcc cgcccccgcc
      241 aaagtcgata caggccgcgc ccagttcctg ctcgtcctcg accagcgcgg cccgggccga
      301 ggcataggcg gccgaggcga ccccggccag ttccagatcg cagcgccgga tgcattgcac
      361 caggttgccg atcacgtctt catccacggt cagcacatgc atgtcgcagg ccaggcggtt
      421 gccgacatga tcgcgcggat cggacagccc gctgcgattg tccacggcga aattcaccgg
      481 ctgcgcgtgc agcacctcgc gtccgcgccc gaaatcgggg gtttcgcagg ccgccaggac
      541 cgaggccacg tcatgttcgc tgaccttgcc cgattccagc acgatctcgc catcgagccc
      601 gtaggatgcg ggccgcccgc cggacatgca ggcgatgaca tgatcgaccc ggcagccggc
      661 caccttctgc gcgccggcca ccacggtgcg gatcgcgcgc tcggtctcgg ccatggtgtc
      721 gatttcgccc cggcgcatcc cgcgagagcg cgtcgtcgcc gcgccgatca cgcggaaatt
      781 ggcctgcccc gccatcggac ccacgccatc gacctcgcga tccgttccgg tgccgtcgaa
      841 tttcagaacg agacaggcga ttttcgaggt gcctatgtca aggatgccga ccacgccccg
      901 ttgcaatgcc gcccggcgga tgtttcgcat cgcccgctgc gtctgataca attcgaccat
      961 cgccgctcag cccctctttc tatcgtcttc gtccagaaca ttgccgtccg gccccagcaa
     1021 cggcaggccg cgcgccttgc ggatcgaatt gcgcgcgtcg atccccagcc gaagcaccgg
     1081 cctcgagggg ctgcgcagat cgacaacctg gatgtcgcgg cccagcatgt cctgcgaccg
     1141 gttcagcgca acggcggcct gcaacgcgat gaccgcgcct tcctcgggca gcatgatgcg
     1201 ctggttgttg tccagcacca gatcccagcg gcgttcgccg cgccgcacca ggccacgcac
     1261 ccgcggcagg atcggtcccg ccgcatccag cagttgcagg gcctcctggg tttccagatc
     1321 cgccccatcg ccggcgatca gcggcagatc gggccgcaca tcgcgcgagg tcacgctggc
     1381 cacccgattg ccggtcgcat ccagaatgtc gatcccggcg gcatggcgcc acagcagcgc
     1441 gggcacccgc tccttgacga cggccgagag gatgccgccg ggcttgatcc gcaggtcgat
     1501 ggattcgacc gcgtccagtt gcatcacctg aagccgcatc gccgtcaggt cgatatcgaa
     1561 gctggaggcc ggcagatcga ccggcagcat cccgcgcagg gccttgtcca cgacgggcga
     1621 ggcgccttcg atcgtcatca tgcggacctg aaattcctcg cggctctgca ccttgtccac
     1681 cagcccggcg acgccggcgc c
//
LOCUS       DTVW01000639            3056 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1783590, whole
            genome shotgun sequence.
ACCESSION   DTVW01000639 DTVW01000000
VERSION     DTVW01000639.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3056)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3056)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3056
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1783590"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..881
                     /locus_tag="EYO87_08420"
     CDS             <1..881
                     /locus_tag="EYO87_08420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011746763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA gyrase subunit B"
                     /protein_id="HIC66007.1"
                     /translation="IRTLLLTFFFRQMPDLIEAGHLYIAQPPLYKVGRGRSEVYLKNE
                     AALEDYLIQQGVEGAALRLGDGTAITGNDLARVVEEARVTRRILRAYPTHYPPHITEQ
                     AAIAGALVPGRVDADAQGVASAIAARLDMIAEEYERGWQGRPTQDAGIRLTRTLRGVE
                     ENRVLDGQMLRSGESRRLGEMTGALQDIYGRPAHLVRKDRDQPIFGPLGLLQAIFLEG
                     EKGLSLQRYKGLGEMNPDQLWETTLDPGARTMLQVRIEDVAEAEDLFTKLMGDVVEPR
                     REFIQQNALSVENLDI"
     gene            896..1525
                     /gene="cobO"
                     /locus_tag="EYO87_08425"
     CDS             896..1525
                     /gene="cobO"
                     /locus_tag="EYO87_08425"
                     /EC_number="2.5.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_769900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cob(I)yrinic acid a,c-diamide
                     adenosyltransferase"
                     /protein_id="HIC66008.1"
                     /translation="MSPNPDPSPEDLARHSQKMKKLKVARDRLMETKIVEKGLIIVHT
                     GNGKGKSSSGFGMIMRCIGHGMPCAVVQFIKGTWDTGEKRVLTQHFGDICRFHVSGEG
                     FTWETQDKARDIAAARAGWETARTLIRDPAIRMVLLDEINIAFRHGYLDAAEVLDFLA
                     AEKPPMTHVVLTGRNAPEALIAAADLVTEMTLLKHPFRQGVKAQQGVEF"
     gene            1692..2423
                     /gene="otsB"
                     /locus_tag="EYO87_08430"
     CDS             1692..2423
                     /gene="otsB"
                     /locus_tag="EYO87_08430"
                     /EC_number="3.1.3.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018301470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trehalose-phosphatase"
                     /protein_id="HIC66009.1"
                     /translation="MTAPQLPDDAALFLDFDGCLVEIAERPDAIIVPADLPARLARLH
                     RRLDGAVALVSGRDVADLRRYLPDFPGAIAGSHGAELSLDGTRIEATHDTALDAAALH
                     RTARAMAAPHPAVLVEPKPHGVVMHYRADPALRGFVEDCMTRLAETHPGMALQPAKMA
                     VELRPAGRGKDGALARLMDLPSFRGRVPVYAGDDLTDEPAIAEAQARGGFGIKIGDGE
                     TGARHRLADPAALAGWLDGALAQCG"
     gene            2438..>3056
                     /locus_tag="EYO87_08435"
     CDS             2438..>3056
                     /locus_tag="EYO87_08435"
                     /inference="COORDINATES: protein motif:HMM:PF00982.19"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trehalose-6-phosphate synthase"
                     /protein_id="HIC66010.1"
                     /translation="MSRLVVVSNRLPLGDNPSGGLVVALEDALRGSGGLWIGFSGEQV
                     EDPSDDLVFHQGARFERAAFDLSPRDHDAYYLGYSNSVLWPLCHGRADLTRIMPEHVE
                     GYRRVNARIARMMLPHLKPDDRIWVQDYQLFPLASELRKLGVEARIGHFLHIPFPGPA
                     DCAALPNPGELFEWLSCYDLLGFQAQRDLSNFTESARQLSRIEMQR"
BASE COUNT          506 a         1024 c         1017 g          509 t
ORIGIN      
        1 atatccggac gctcttgctg accttcttct tccgccagat gccggacctg atcgaggccg
       61 ggcatctcta tatcgcgcag ccgccgctct acaaggtcgg gcgcggccgg tccgaggtct
      121 atctgaagaa cgaggccgcg ctggaggatt acctgatcca gcaaggggtc gagggcgcgg
      181 cgctgcggct tggcgacggc accgcgatca ccggcaacga tctggcccgc gtggtcgagg
      241 aggcgcgcgt gacccgccgc atcctgcgcg cctatcccac ccattatccg ccccatatca
      301 ccgaacaggc cgccattgcc ggggcgctgg taccgggccg cgtcgatgcg gatgcacagg
      361 gcgtggccag cgccatcgcc gcgcggctgg acatgatcgc cgaggaatac gaacgcggct
      421 ggcaggggcg gccgacgcag gatgccggca tccgcctgac ccgcaccctg cgcggggtcg
      481 aggaaaaccg tgtcctggac gggcagatgc tgcgcagcgg cgaaagccgc cgtctgggcg
      541 agatgaccgg cgccctgcaa gacatctatg gccggcccgc gcatctggtc cgcaaggacc
      601 gcgaccagcc catctttggt ccgctgggcc tgttgcaggc catcttcctc gagggcgaga
      661 aggggctgtc gctgcaacgc tacaagggtc tgggcgaaat gaaccccgat cagctttggg
      721 aaacaacgct cgatcccggc gcgcgaacca tgttgcaggt ccgcatcgag gacgtggccg
      781 aggccgagga tctgttcacc aagctgatgg gcgacgtggt cgaaccgcgc cgcgaattca
      841 tccagcagaa cgccctgtcg gtcgagaacc tggatatctg acaaggatcg ccgcgatgtc
      901 cccgaacccc gacccctcgc ccgaggatct ggcacggcac agccagaaga tgaagaagct
      961 gaaggtcgcg cgggaccggc tgatggaaac gaagatcgtc gagaagggcc tgatcatcgt
     1021 ccataccggc aacggcaagg gcaaatccag cagcgggttc ggcatgatca tgcgctgcat
     1081 cggtcacggc atgccctgcg cggtggtgca gttcatcaag ggcacctggg acacgggcga
     1141 aaagcgggtg ctgacgcagc atttcggcga tatctgccgc tttcacgtct cgggcgaggg
     1201 cttcacctgg gaaacgcagg acaaggcccg cgacatcgcc gccgcccgcg ccggttggga
     1261 gacggccaga accctgatcc gcgatccggc gatccgcatg gtcctgctgg acgaaatcaa
     1321 catcgccttc cgccacggct atctggacgc ggccgaggtg ctggactttc tggccgccga
     1381 aaaaccgccc atgacccatg tcgtgctgac cggccgcaac gcgcccgagg cattgatcgc
     1441 ggccgccgac ctggtgaccg agatgacctt gctgaaacat ccgttccggc agggcgtgaa
     1501 ggcgcagcag ggcgtcgaat tctgaggttt ccgcccgtcg cggccatccg gcccggccgg
     1561 accgggcctt cttgcagcgc gccggacggc atcgcaaatg tttgccgaac caatccgggc
     1621 cctgcgggtt gacccggcag gcgcggcaga aaatccatgt cgcgttgccc gtttcaatgg
     1681 atcatgcccg aatgaccgca ccgcaactgc ccgatgatgc cgccctgttt ctcgatttcg
     1741 atggctgcct ggtcgagatc gccgaacgcc cggatgccat catcgtgcct gcggacctgc
     1801 ccgcccggct ggcccggctg catcggcgtc tcgatggcgc ggtggcgctg gtctcgggcc
     1861 gcgacgtggc cgatctgcgg cgctacctgc cggattttcc gggcgccatc gccggcagcc
     1921 acggcgccga gctgtcgctg gacggcacgc ggatcgaagc cacccacgac accgcgctgg
     1981 atgccgccgc cctgcatcgc accgcgcgcg cgatggcggc cccgcatccg gcggtgctgg
     2041 tcgagccgaa accccatggc gtcgtcatgc attatcgtgc cgatcccgcc ctgcgcggct
     2101 tcgtcgagga ctgcatgacc cggttggccg aaacccatcc cggcatggcg ctgcaacccg
     2161 ccaagatggc ggttgaactt cgccccgccg gccggggcaa ggatggcgcc ttggcccggc
     2221 tgatggatct gccttccttc cgggggcggg tcccggtcta tgccggcgac gacctgaccg
     2281 acgagcccgc catcgccgag gcgcaggcac gcggcggctt cgggatcaag atcggcgacg
     2341 gcgaaacggg ggcgcggcat cggctggcgg atcccgcggc gctggccggg tggctggacg
     2401 gcgcgctggc gcaatgcgga tgaaagggta aggggtcatg tctcgtcttg tcgtggtatc
     2461 caatcgcctg ccgctgggtg acaatccctc gggcggcctc gtcgtggcgc tggaggacgc
     2521 gctgcgcggt tcgggcgggt tgtggatcgg cttttcgggc gagcaggtcg aggatccctc
     2581 cgacgatctg gtctttcacc agggcgcccg gttcgaacgc gccgccttcg acctgtcccc
     2641 ccgcgatcac gacgcctatt atctgggcta ttcgaattcc gtcctctggc ccttgtgtca
     2701 tggccgcgcc gatctgaccc ggatcatgcc cgaacatgtc gagggatacc ggcgggtcaa
     2761 tgcccgcatc gcgcggatga tgctgccgca tctgaaaccg gatgaccgga tctgggtgca
     2821 ggattaccag ctcttcccgc tggcctcgga actgcgcaag ctgggggtcg aagcccggat
     2881 cgggcatttc cttcacattc cctttcccgg cccggccgat tgcgccgccc tacccaatcc
     2941 cggcgaattg ttcgaatggc tgtcctgcta tgaccttctg ggattccagg cgcagcgcga
     3001 cctgtccaat ttcaccgaaa gcgcgcggca attgtcgcgg atcgagatgc agcggg
//
LOCUS       DTVW01000640            1713 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1784545, whole
            genome shotgun sequence.
ACCESSION   DTVW01000640 DTVW01000000
VERSION     DTVW01000640.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1713)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1713)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1713
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1784545"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            180..890
                     /locus_tag="EYO87_08440"
     CDS             180..890
                     /locus_tag="EYO87_08440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009813526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FadR family transcriptional regulator"
                     /protein_id="HIC66011.1"
                     /translation="MSETRRPSLADQVYDQLLATILEEKYPVQSRLPAEDVLAQNFGV
                     SRPIVRAALSRLRDDGIVQSRRGSGSYVLRRPDRQLISFIPLESVSGVQRCYEFRIDV
                     EGAAAAWAARRRDEDDLAAMDHAYEVMKQAYEQNALGVEADQMLHLAVARASKNPFFA
                     SVLESLEEQIAFGVKLSRSLTLLDTPVRQERVLAEHRAVLDAIRLQQPEVAKAAMRHH
                     ITAAKDRMFVGKPEKDRS"
     gene            complement(954..>1713)
                     /locus_tag="EYO87_08445"
     CDS             complement(954..>1713)
                     /locus_tag="EYO87_08445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019994943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HIC66012.1"
                     /translation="PGSGRLKDRVAIITGGDSGIGRATAVLFAREGADVTIVYLDEHD
                     DAEKTRSLVKDEGRKALLLAGDVGSKSFCEDVARQTLDEFGRLDVVVCNAAEQHARED
                     VTEISEDQLFRTFRTNLGGQFFMVQAALPHLEKGASIICTTSVTAYRGQDLLIDYASS
                     KGAILSFMRAMSSKLAPRGIRVNGVAPGPIWTPLIPASFPPDKVKDFGKSSPLGRPGQ
                     PNEVASAMLFLACDDGSYFTGQVLHPNGGDLVGS"
BASE COUNT          320 a          545 c          535 g          313 t
ORIGIN      
        1 cctcgacgag atcgcgacgg ccctgcgcgg cctcggcctt ggccttggcc ttggcagggg
       61 tgcctgaccg accgcggtga cggcaagatc gttacaaggg tcggtcgcgg gcctataaag
      121 gagatcaggt ggctggccgg cgcggatttc agtccagacc aaacatgaag gagatcacct
      181 tgtcagagac ccgtcgcccc tctttggcgg atcaggttta cgatcaactg ctggcgacaa
      241 ttctcgaaga gaaatacccg gtgcaaagtc ggctgcccgc cgaagacgtc ctggcccaga
      301 atttcggcgt ctccagaccg atcgtgcgcg cggcgctttc gcgccttcgc gatgacggga
      361 tcgtccagtc gcgacgcggc tctggcagct atgtcctgcg ccggcccgac cggcagctca
      421 tcagtttcat tccgctggaa tccgtctcgg gcgtccaacg ctgctacgaa ttccgcatcg
      481 acgtggaagg ggcggccgcc gcatgggcgg cacggcgccg agacgaagat gatcttgccg
      541 cgatggatca cgcctatgag gtgatgaagc aagcctatga acagaacgct ctgggtgtcg
      601 aggcagacca gatgcttcac cttgccgtgg cgcgtgcctc gaagaacccg ttcttcgctt
      661 cggttctcga atcgcttgaa gaacagatcg cctttggcgt gaagctgtcg cgatccctga
      721 ccctgctgga tacgccggtg cgtcaggaac gggtgctggc tgaacatcga gccgtcctgg
      781 acgcgatccg gctgcagcag ccagaggtcg ccaaggccgc catgcgccat catattaccg
      841 ccgccaagga ccggatgttc gttggcaaac cggaaaagga ccgatcgtga aaacatcgcg
      901 gtcggccttg cccgaagacc ggcgtcccgg acccctgggc cacgaggccg atctcagctt
      961 ccgaccaggt cgccgccatt ggggtgcaga acctggccgg tgaaatagga cccgtcatcg
     1021 caggccagaa acagcatggc agaagcaacc tcgttgggct ggccgggacg gcccagcggt
     1081 gaggacttgc cgaaatcctt caccttgtcc ggtgggaacg aggcggggat cagcggcgtc
     1141 cagatcggtc cgggggcaac gccgttcacg cgaatccccc tgggcgccag cttggacgac
     1201 atggcccgca tgaaggacag gatcgcaccc ttgctggacg catagtcgat cagcagatcc
     1261 tggccgcgat aggcggtcac agaggtggtg cagatgatcg atgcgccctt ctccagatgc
     1321 ggcagcgctg cctgaaccat gaagaactgt ccgcccagat tggttcggaa ggtgcgaaac
     1381 agctggtctt cggagatttc ggtgacgtcc tctcttgcgt gctgttcggc cgcgttgcag
     1441 accacgacat ccaggcgtcc gaactcgtcc agggtctggc gtgccacgtc ttcgcagaac
     1501 gacttgctgc ccacgtctcc cgccagcaac aaagccttgc ggccctcgtc cttcaccaga
     1561 ctgcgtgtct tttccgcgtc gtcatgttcg tccagataga cgatcgtcac atcggcgcct
     1621 tcccgcgcga acaggaccgc ggtcgcgcgt ccgataccgg aatcgccgcc ggtgatgatc
     1681 gccaccctgt ccttcagtcg tcccgacccg gga
//
LOCUS       DTVW01000641            5212 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1785833, whole
            genome shotgun sequence.
ACCESSION   DTVW01000641 DTVW01000000
VERSION     DTVW01000641.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 5212)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5212)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5212
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1785833"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..278
                     /locus_tag="EYO87_08450"
     CDS             <1..278
                     /locus_tag="EYO87_08450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007793845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="energy-dependent translational throttle protein
                     EttA"
                     /protein_id="HIC66013.1"
                     /translation="VLLLDEPTNDLDVETLQALEAALEDFAGCAVIISHDRFFLDRLC
                     THILAFEGDAHVEWFEGNFEAYEQDKVRRLGPDSIEPKRVKYKKFTR"
     gene            complement(413..1186)
                     /locus_tag="EYO87_08455"
     CDS             complement(413..1186)
                     /locus_tag="EYO87_08455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015496733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HIC66014.1"
                     /translation="MSPAVNWPGIWAIFHHEMMRFFRTIMQSMLSPVISTTLYFVVFG
                     AAIGGRIQSVEGVPYGAFIVPGLMMLTILQQSVSNASFGIYFPKFSGTIYEYLVSPVG
                     WIEVTAGFVGAAAVKAMLIALVILATSFFFVGVHILHPFWMMAFLFLTALGFSLLGFI
                     IGLWARSFEQLQLIPLMVITPLVFLGGAFYSASMLPPFWEAVAKLNPVLYLISGFRWA
                     FFGLADVPVGVSLVAVAVMVVICFAIIRWIFATGWRLRE"
     gene            complement(1183..2127)
                     /locus_tag="EYO87_08460"
     CDS             complement(1183..2127)
                     /locus_tag="EYO87_08460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010398215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIC66015.1"
                     /translation="MTNIIEIDDLSKQYGSGTTALQGVSMEIAEGEIVALLGPNGAGK
                     TTLISIICGLVVPTGGTVRVGGHDIRTDWRAARRLIGLVPQEIALEPFETVWNTVRFT
                     RGLYGAGPDDAYLEQVLRSLALWDKRAAMTRELSGGMKRRVLIAKALSHQPRVLFLDE
                     PTAGVDVALRREMWQVVEGLRRDGVTIILTTHYLEEAEEMADRIGVINRGELLLMKPK
                     DDLMGEFGRKSLTIELDAPLTAVPKSVADRGLVLSEDGRAIRYDYDTRAERTGIARLL
                     GDLAGEGVTVRDVSTRQSSLEEVFMTLVNEDRKAEDAA"
     gene            complement(2153..3355)
                     /locus_tag="EYO87_08465"
     CDS             complement(2153..3355)
                     /locus_tag="EYO87_08465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020039167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HIC66016.1"
                     /translation="MDRLLKDPRAWGLMMAAMLTIMSNATITPSLPGLEARFADDPRA
                     ATLTRLLITAPSLLVAIVAPCAGSLTDRLGRRKPLLVGMVIYTVAGTAGLYLDSIEAI
                     LVSRLVLGLGVASIMTSQAALVGDYFEGPARGRLMGYQIAATNLGGLVFVSVAGVLAA
                     QDARLPFAIYGLAGLLLPILSAILPEPARAADGRPVSGPHLTGAEPGWQGVVAVMAGA
                     AMLTFVIFYAIPTQLPYQLNAMGLTDPTSAGAAMGAMMLAAAIASIVSGLVRPRLGRI
                     GTPVTGYLLLATGFAGLTAEHSLPAEMISTGLIGAGLGFCMPTFITTALNVTPARHRG
                     LISGLMTAAIFLGQFLSPLASQPLVAHLGYSGTFRVGAIAFVALAVLLTITLRRQGGG
                     AARPVRAN"
     gene            complement(3355..3936)
                     /locus_tag="EYO87_08470"
     CDS             complement(3355..3936)
                     /locus_tag="EYO87_08470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009492093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent oxidoreductase"
                     /protein_id="HIC66017.1"
                     /translation="MGRQKIIGVILGSIREGRVNDRVARWVTGQLERHGFATRLIDPA
                     DPGLLPVQIGDKAAIGSLHQRMQGLDGFVIVTPEYNHAEPGPLKTLIDSSGPGWFARP
                     VGLISYGGMSGGLRAIEALRIILAELHTVTLRDTVSFVSPWRRIDEAGRIADPEDAAA
                     VEAAMAVFAHRLDWWADALAVAREGRPYDPEEG"
     gene            4008..4487
                     /gene="soxR"
                     /locus_tag="EYO87_08475"
     CDS             4008..4487
                     /gene="soxR"
                     /locus_tag="EYO87_08475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013470959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redox-sensitive transcriptional activator SoxR"
                     /protein_id="HIC66018.1"
                     /translation="MSRKINSSQSSLPNSLPVGALSRRSGIPVSAIRFYEREGLLTAS
                     RNAIGHRRYGRASLRILAIIKAGQQAGIPLAEIRTALGPAVNGLPLDRDRWRRISEGW
                     RADLDRRIHLLQNVRDRLSDCIGCGCLSHELCAMINPADTAADRGPGAPGLAGPEIA"
     gene            complement(4745..>5212)
                     /locus_tag="EYO87_08480"
     CDS             complement(4745..>5212)
                     /locus_tag="EYO87_08480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010397169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HIC66019.1"
                     /translation="GGGLPISAVTGRAEVMDSPNPGGLGGTYAGNPLAVAAAHAVLDV
                     IEDEDLCDRAVRLGQRLKQRLAALRDEVPEIADIRGPGFMNAVEFNLPGSASPHPDFA
                     NRVRSEALDRGLILLTCGVHGNVIRFLAPLTIPDAVFEEALDVIEASLIAARE"
BASE COUNT          930 a         1885 c         1616 g          781 t
ORIGIN      
        1 acgtgctgct gctggacgaa ccgaccaacg atctggacgt cgagacgctt caggcgctgg
       61 aagccgcgtt ggaagatttt gccggctgcg cggtgatcat cagccacgac cgcttcttcc
      121 tcgatcgcct ctgcacccat atcctggcct tcgagggcga tgcccatgtc gaatggttcg
      181 aaggcaattt cgaggcctat gaacaggaca aggtgcgcag gctgggaccg gacagtatcg
      241 agccgaagcg ggtgaaatac aagaagttca cccgctaacc cgccacgctg gccaccaatc
      301 cggcggccgg cccggatgcc ggttcacaaa acgcggccgc gcccgaccgc aggcgggcgc
      361 ggatttggct gtgccagaca tgtggtcggg cggcccgcca ccgcgccgat gcctattccc
      421 gcagccgcca gccggtcgcg aagatccagc ggatgatggc aaagcagatc accaccatga
      481 ccgccaccgc gaccagcgac acgccgacgg gcacatcggc cagcccgaag aaggcccagc
      541 gaaagcccga gatcaggtag agaaccggat tcagcttggc caccgcctcc cagaagggcg
      601 gcagcatcga ggccgaatag aaggcgccgc ccaaaaacac caggggcgtg atgaccatca
      661 gcgggatcag ttgcaactgc tcgaacgacc gggcccaaag cccgatgatg aagcccagca
      721 acgaaaagcc aagcgcggtc aggaacagga aggccatcat ccagaacgga tgcaggatat
      781 gaacgcccac gaagaagaaa ctggtcgcca ggatcaccag cgcgatcagc atcgccttga
      841 ccgcggccgc gccgacgaaa cccgccgtca cctcgatcca gccgacgggc gagaccagat
      901 attcgtagat cgtgcccgag aatttcggga aatagatccc gaaactggca ttgctgaccg
      961 attgctgaag aatcgtcagc atcatcaggc cgggcacgat gaaggcgccg tagggcacgc
     1021 cctcgaccga ctggatacgt ccgccgatcg ccgcgccgaa gaccacgaaa tacagcgtcg
     1081 tcgagatcac cggcgacagc atcgactgca tgatggtgcg gaagaatcgc atcatctcgt
     1141 gatggaagat cgcccagatg ccgggccagt tgacggccgg gctcatgccg cgtcctccgc
     1201 tttcctgtcc tcgttgacca gcgtcatgaa cacctcttca aggctggatt gccgggtcga
     1261 gacatcgcgc accgtcacgc cctcgccggc cagatcgccc agcaggcgcg caatgcccgt
     1321 gcgctcggcc cgcgtgtcgt aatcatagcg gatcgcgcgc ccgtcttcgg acagaaccag
     1381 accgcgatcc gcgaccgatt tcggaaccgc cgtcagcggc gcatccagtt cgatggtcag
     1441 ggatttcctg ccgaattcgc ccatcaggtc gtccttgggc ttcatcagca gcaattcgcc
     1501 ccgattgatg acaccgatgc ggtcggccat ctcctcggcc tcttccagat aatgcgtggt
     1561 caggatgatg gtcacgccgt cgcggcgcag cccttcgacg acctgccaca tctcgcggcg
     1621 cagggccaca tcgacccccg ccgtcggttc gtccagaaac agcaccctgg gctgatgcga
     1681 cagcgccttg gcgatcagca cccgccgctt catcccgccc gacaattcgc gcgtcatcgc
     1741 ggcgcgcttg tcccacaggg ccagcgaccg cagcacctgt tccagatagg catcgtcggg
     1801 ccccgcgcca tacaggccgc gcgtgaatcg caccgtgttc cagaccgtct cgaacggctc
     1861 cagcgcgatt tcctgcggga ccagcccgat cagccgccgc gcggcgcgcc aatcggtgcg
     1921 gatgtcgtgg ccgccgacgc ggacggtgcc gcccgtaggc acgaccagcc cgcagatgat
     1981 cgagatcagc gtcgtcttgc ctgccccgtt cgggcccagc agggccacga tctcgccctc
     2041 ggcaatctcc atgctgacgc cttgcagcgc cgtggtgccg ctgccgtatt gcttcgacag
     2101 atcgtcgatt tcgatgatat tcgtcatccc tcgtttcctt gtccttcggc cgtcagttcg
     2161 cccgcaccgg ccgggccgca ccgccgccct gtcgccgcaa cgtgatggtc agcagcaccg
     2221 ccagcgcgac aaaggcgatc gcgcccacgc gaaacgtgcc cgaatagccc agatgggcga
     2281 ccagcggctg agatgccaga ggcgacagga actgacccag aaaaatcgcc gccgtcatca
     2341 gccccgagat cagcccgcga tgccgcgcgg gcgtcacgtt cagcgccgtg gtgatgaagg
     2401 tcggcatgca aaagcccagc cccgcgccga tcagcccggt cgagatcatc tcggccggca
     2461 gcgaatgttc ggccgtcagc cccgcaaatc cggtcgccag caacagatac cccgtcaccg
     2521 gcgtcccgat ccgccccagc cggggccgca ccagccccga gacgatcgag gctatggccg
     2581 cggccagcat catcgccccc atcgccgccc cggcgctggt cggatcggtc agacccatcg
     2641 cgttcagctg atagggcagt tgcgtcggga tcgcgtagaa gatcacgaag gtcagcatcg
     2701 ccgcgcccgc catcaccgcg accacgccct gccagcccgg ctcggccccg gtcagatgcg
     2761 gtccgctgac gggtctgcca tcggccgcgc gcgccggctc gggcaggatc gccgacagga
     2821 tcggcagcag cagcccggcc agcccgtaga tcgcaaaggg caggcgcgcg tcctgggcgg
     2881 ccagcacgcc cgccacgctg acaaagacca gtccgcccag attggtcgcg gcgatctgat
     2941 agcccatcag ccgcccacgc gccggacctt cgaaataatc gccgaccagc gcggcctgcg
     3001 acgtcatgat cgacgccacc cccaggccca gcaccaggcg gctgaccaga atggcctcga
     3061 tcgaatccag atacagccct gcggttcccg ccacggtata gatcaccatg cccaccagca
     3121 gcggcttgcg ccgccccagc cggtcggtaa ggctgccggc gcaaggcgcg acgatggcga
     3181 ccagcagcga gggcgcggtg atcagcagac gggtcagcgt cgcggcccgg gggtcgtcgg
     3241 caaagcgcgc ctcgagcccc ggcagcgagg gggtgatcgt ggcgttggac atgatggtca
     3301 gcatcgcggc catcatcagc ccccatgcgc gggggtcctt cagaagccgg tccatcaccc
     3361 ctcctccgga tcatagggtc gtccttcgcg cgccacggcc agcgcgtcgg cccaccagtc
     3421 cagccgatgc gcgaagacgg ccatcgccgc ctcgaccgcc gccgcgtcct cggggtcggc
     3481 gatccgcccc gcttcgtcga tcctccgcca gggcgagacg aaactgaccg tatcgcgcag
     3541 ggtcacggtg tgcagttcgg ccaggatgat gcgcagcgcc tcgatcgcgc gcagcccgcc
     3601 cgacatgccg ccatagctga tcagccccac gggccgtgcg aaccagcccg gccccgagga
     3661 atcgatcagc gtcttcagcg gccccggctc ggcgtgattg tattccggcg tgacgatgac
     3721 gaaaccgtcc agcccctgca tccgctggtg caggctgccg atcgccgcct tgtcgccgat
     3781 ctgcaccggc agcaggccgg gatcggccgg gtcgatcagc cgcgtggcaa aaccgtgccg
     3841 ctcaagctgg ccggtgaccc aacgcgcgac gcgatcattc acccgaccct cgcggatcga
     3901 gcccaggatc acgccgatga tcttctgtcg tcccatgcct gttccttgcc atttgcgttg
     3961 caggatgcga ccctagcgcc tgaaccttgg ttgaggacaa ggacaaaatg tcccgcaaaa
     4021 tcaattcgtc acaatcgtct ctgccgaaca gccttcccgt cggcgcgctg tcccggcgca
     4081 gtggaatccc cgtctcggcg atccgtttct atgaacgcga ggggcttttg acagcctccc
     4141 gcaacgcgat cggccatcgt cgctatggcc gcgccagcct tcggatcctg gcgatcatca
     4201 aggccggtca gcaggccgga atcccgctgg ccgaaatccg caccgctctg ggtccggccg
     4261 tcaatggcct gccgctggat cgcgaccggt ggcgccggat ctccgagggc tggcgcgccg
     4321 atctggaccg ccgcatccac ctgttgcaga acgtccggga ccggctgtcc gactgcatcg
     4381 gctgcggctg tctgtcgcac gagttgtgcg ccatgatcaa cccggccgac accgccgccg
     4441 accgcggccc cggagcgccc ggccttgccg gcccggagat tgcatgaccc gatatagggc
     4501 cggctgtcgc cgtggcaagg tcggcatggc ggcgtccatc ccctcggtcc ggccggtcac
     4561 ggcgattggc ccattgccgc ggcggtgatg gggggccggt ctccgggggt tcgggcgcag
     4621 tcccgatccc cggcgtcgcc gcggcccgcg tggtgcatag cccgagccgc cccgctgcac
     4681 ccgctgcccg tgccccgcat ctggcgggat ttccggaatc agcaccgcgc gtccgttgcg
     4741 ggtcctattc ccgcgccgcg atcaagctgg cctcgatcac atccagcgcc tcctcgaaga
     4801 ccgcgtccgg gatggtcagc ggggccagga accggatcac attgccatgc accccgcagg
     4861 tcagcaggat caggccgcga tccagcgcct cgctccgcac ccggttggca aagtcgggat
     4921 gcggtgaagc gctgccgggc aggttgaact cgaccgcgtt catgaagccc gggccgcgta
     4981 tatccgcgat ctcgggcacc tcgtcgcgca gcgccgccag ccgctgcttc agccgttggc
     5041 ccagccgcac ggcccggtcg cacagatcct cgtcctcgat cacgtccagc accgcatgag
     5101 cggccgcgac ggccagcgga ttgcctgcat aggtgccgcc cagaccgccg ggattggggc
     5161 tgtccatcac ctcggcccgg ccggtcacgg cgctgatcgg cagcccgccg cc
//
LOCUS       DTVW01000642            1166 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1785946, whole
            genome shotgun sequence.
ACCESSION   DTVW01000642 DTVW01000000
VERSION     DTVW01000642.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1166)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1166)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1166
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1785946"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..214)
                     /locus_tag="EYO87_08485"
     CDS             complement(<1..214)
                     /locus_tag="EYO87_08485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011750282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)(+) transhydrogenase (Re/Si-specific)
                     subunit alpha"
                     /protein_id="HIC66020.1"
                     /translation="MKIGALKEGFAGEARVAITPSSATHLRKLGHEAFVESGAGAAAG
                     FSDDDYRAAGVGVEPDAAALIGAVDIV"
     gene            complement(531..1145)
                     /locus_tag="EYO87_08490"
                     /pseudo
     CDS             complement(531..1145)
                     /locus_tag="EYO87_08490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010394839.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT          156 a          405 c          386 g          219 t
ORIGIN      
        1 ccacgatatc gaccgcgccg atcagcgccg cggcgtccgg ttccacgccg acgccggcag
       61 cgcggtaatc gtcatcggaa aacccggctg ccgcacctgc accgctttcg acaaatgcct
      121 cgtgccccag cttgcgaaga tgcgtcgccg aagacggcgt gatcgcaact cgcgcctccc
      181 cggcgaagcc ttccttcaaa gcgccaatct tcatggcctc gatgccccct cgctgaattc
      241 caaattctgt cgctgaaccc atagcattgc gcaacaatct ttcacaagac cgtggttgcg
      301 gcccagccat tccgcggcac ctctcgcctg acgcggacaa actgcgggtc ggtcgccacg
      361 aaaaatgccg cgcggcaccc gtccgcgcgg cattccatcg cttttccttg gactgcccgc
      421 gagggtcagt tcgccggcgc ggtctgggtc gtgctgtccg ctccggcgct gccctgcgtg
      481 cccgtggtgc cggccgagcc gtccgtgccc gtggcggtgc cggtctcggg ggcgggagtg
      541 gtcgtggtcg aaggctgggt cgtggccggt tgatcggtga ccgcctcatc gactgcattg
      601 gccgcatccg acgccgcctc ggccgccgaa tcggctgcgt tctgggccgc atcggcggcg
      661 gactggaccg cctgccccac gctgtcgccg gtcgcctggg ccgcgttctc ggccgcagtg
      721 gccgcatcgc ttgcggcatt ttcagccgcg gtcgcagcgt cgctggcagc gttctcggcg
      781 gcagtggcgg cctcgttcgc agccgcctcg gcatcggcgg cggcgttgtc ggctgccgat
      841 tgcgtctcgg tgcccgccgt ctggtctgcc ggcgccgcga ccggatcggt cgccgtggtg
      901 gtatcggccg cgggaacatc ggttgtcgtt gtcacggtcg tggtgtcgcc ttcgaccgcc
      961 acggtatcgt cggtcatgaa ccgttgcagc acgaaataag ccaaggccag cgcaagaaga
     1021 acaccgatga tcagcggcag cgccgaggac cggcgctcga ccggctcgac ataggtttcc
     1081 ttgggcgcgg cagggtcgcg atcgacggga tcggtgcgct tcgggtcatt cgggtcgtag
     1141 gtcatgtgct gccctccaat ttatgc
//
LOCUS       DTVW01000643            4543 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1786241, whole
            genome shotgun sequence.
ACCESSION   DTVW01000643 DTVW01000000
VERSION     DTVW01000643.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 4543)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4543)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4543
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1786241"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(121..702)
                     /locus_tag="EYO87_08495"
     CDS             complement(121..702)
                     /locus_tag="EYO87_08495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008884625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c4"
                     /protein_id="HIC66021.1"
                     /translation="MRVAILSMALGGLWLAGAALSQEVAGDPASGRKLAGQCRTCHGI
                     EGAAKMPAAPSIGGEPASFLASQLTAFRSGTRQNEMMSVVAAALSDQQIADLAAWYSS
                     QTAVATLTADPSGAPESCVSCHGVDGMGMDDDTPDLAGENSIYLLSQLKAFRQGSRPS
                     EIMQPIAESLDDDQMRAAAEWYASVKLEIAKPE"
     gene            complement(699..1952)
                     /locus_tag="EYO87_08500"
     CDS             complement(699..1952)
                     /locus_tag="EYO87_08500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007089040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sorbosone dehydrogenase"
                     /protein_id="HIC66022.1"
                     /translation="MNTLMLGAAAAALMATAAVAQNTDVPDNLDKLSNFKSTGTTEFT
                     YIDQTGDYADGIKKTLEKIKLPQGFKIALYAVVPDARNMAVGPQGIVTFVGTRKDKVW
                     SITDRNKDRVADEVKDFAPSLAFTIPNGPCFSKDGFLYIAEQNRVLLFPAAEFFYESP
                     DVAAFSVLKQGDLIPPDEESFNHTARVCDIGPDGKLYIALGQPFNVPPPEKMEKYDKY
                     GLGGIIRINTDGTGREVFARGIRNSVGMDFDPDTGDLWFTDNQVDGMGDDIPPGEINH
                     VTEAGQNFGFPWYGGGDVRTVEYKDQDPPADVVMPAVEMTAHAADLGMTFYTGSMFPE
                     KYRGAIFSAQHGSWNRTTPVGARVMVTYVAEDGSATTEPFAEGWIDENDEYLGRPVDV
                     AQLRDGSLLVSDDLAGAVYRISYGE"
     gene            2182..3324
                     /locus_tag="EYO87_08505"
     CDS             2182..3324
                     /locus_tag="EYO87_08505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011579693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HIC66023.1"
                     /translation="MTKTNETAGPVSRRSFLRRGGAVAGGAAASTLLAAPAVLAQSPM
                     VLKMQTSWPASDIWQTMAQQYVDRVEAMSGGRLKIDLLPAGAVVGAFQVMDGVSDGVI
                     DIAHSVAAYWYGKNKAASLFGTGPVFGGDPTNMLSWFYQGGGQDLYRELTQDSMGLNV
                     IGMFGFPMPAQPFGWFKNPINGVDDIKGIKYRTVGLAADLLQSMGMSVAQLPGGEIVP
                     AMERGVIDAFEFNNQSSDMRFGAQDVAKNYYLGSYHQASEAFEFLFNRDLMETLDPDL
                     RAILEHGVEAVSTYNTAFALDNYSSDLQKLRDGGVTVRKTPQDILSAQLDAWSEMITT
                     LEQDPFIKKVLDSQRDWVKRTVFYELMDKPDYTLAYEHFFPGELKL"
     gene            3384..3968
                     /locus_tag="EYO87_08510"
     CDS             3384..3968
                     /locus_tag="EYO87_08510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_354876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease subunit"
                     /protein_id="HIC66024.1"
                     /translation="MLSFIRFADNLSGWFGKSFGWLILLMTFGVSYEVFVRYVLNSPT
                     SWSLDVSFIMYGTLFMMGGAYTLSRGGHVRGDFLYRLWPVRVQGAVDFVLYLLFFFPG
                     VTALILSGWKYASRSWQYGEVSVNSPAGIPIYQFKSVIVAAGILLFIQGLAQLMRSII
                     AMRDGVWIKADEDVEETEELLLRDQAPRAGVHVD"
     gene            4008..>4543
                     /locus_tag="EYO87_08515"
     CDS             4008..>4543
                     /locus_tag="EYO87_08515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_354875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HIC66025.1"
                     /translation="MTDPQIALFMLGIFIFLVFLGFPIAFTLMALGIGFGYYAYFDAA
                     RMWRALDRLPEDAAWLTQKWTWLEGFYNNRIFDLFINQTYTVMSNEVLTAVPLFLFMG
                     YVVERANIVDRLFSTLAIASRRMPGSMGVAALITCALFATATGIVGAVVTLMGLLALP
                     AMLKARYDPRFASGIICAG"
BASE COUNT          778 a         1395 c         1451 g          919 t
ORIGIN      
        1 atcgaacgcc gccgtcaggc aaaggtcaag gcccggcgcg aatttcgcgg ccttccgcgc
       61 ctgcgcggag ccgtgaaaac gggcgccggc tgcatcaggc aaccggcgcg gcaggaccgg
      121 tcattccggc ttggcgatct ccagcttgac cgaggcatac cattccgccg ctgcccgcat
      181 ctgatcgtcg tcgagacttt cggcgatggg ctgcatgatc tcgctggggc ggctgccctg
      241 acggaacgcc ttcaactggc tcagcagata gatgctgttt tcgcccgcca gatcgggtgt
      301 gtcatcatcc atccccattc cgtccacccc gtgacaagag acacaggatt cgggtgcgcc
      361 cgagggatcg gcggtcagcg tcgccaccgc cgtctgcgag gaataccagg ccgccagatc
      421 ggcgatctgc tggtccgaca gggcggcggc gacgaccgac atcatctcgt tctgccgggt
      481 gccgctgcga aaagcagtca actggctggc gagaaagctg gcgggttcgc cgccgatgct
      541 gggcgcggcg ggcattttcg ccgcgccctc gattccgtga caggtgcggc attgcccggc
      601 cagcttgcgg cccgaggcgg gatcgcccgc gacctcttgc gacagggcgg caccggcgag
      661 ccacagcccg cccagtgcca tcgaaaggat cgcgaccctc attcgccgta gctgattcgg
      721 tagaccgcgc cggcgagatc gtccgaaacc aggagcgatc cgtcgcgcag ttgcgccaca
      781 tcgacgggcc ggcccagata ttcgtcattc tcgtcgatcc agccctcggc aaagggttcg
      841 gtcgtggcgc tgccgtcctc ggcgacatag gtgaccatga cccgcgcgcc gaccggagtg
      901 gtgcggttcc atgatccgtg ctgggccgag aagatcgcgc cgcgatattt ttccgggaac
      961 atgctaccgg tgtagaaggt catgcccaga tcggctgcat gggcggtcat ctcgacggcg
     1021 ggcatcacga catcggccgg cggatcctga tccttgtatt cgacggtgcg cacatcgccg
     1081 ccgccatacc acggaaagcc gaaattctgg ccggcttcgg tgacatggtt gatctctccg
     1141 ggtggaatgt cgtcgcccat tccgtccacc tggttgtcgg tgaaccacag atcgcccgta
     1201 tcgggatcga aatccatccc gaccgagttg cggatgccgc gggcgaagac ctcgcgtccg
     1261 gttccgtcgg tattgatgcg gatgatgccg cccaacccgt atttgtcata cttctccatc
     1321 ttttccggtg gggggacatt gaagggctga ccaagcgcga tgtagagctt gccgtcgggt
     1381 ccgatgtcgc agacccgcgc ggtgtggttg aagctttcct cgtccggggg aatcagatcg
     1441 ccctgtttca ggacgctgaa tgccgccaca tccgggcttt catagaagaa ctcggccgcg
     1501 gggaacagca gcacgcggtt ctgttcggcg atataaagaa agccgtcctt ggaaaagcac
     1561 ggcccgttgg ggatggtgaa ggccagcgag ggcgcgaaat ccttcacctc gtcggcgacg
     1621 cggtccttgt tgcggtcggt gatggaccag accttgtcct tgcgggtgcc gacaaaggtg
     1681 acgatgccct gtggacccac ggccatgttg cgggcgtcgg gaaccaccgc atagagcgcg
     1741 atcttgaagc cctgcggcag cttgatcttt tccagcgtct tcttgattcc gtcggcataa
     1801 tcgccggtct gatcgatata ggtgaactcc gtcgttcctg tggatttgaa gttcgacagc
     1861 ttgtccagat tgtcgggcac atccgtattc tgtgcgacgg cagccgtcgc catcaatgcg
     1921 gccgcggccg cccccagcat gagcgtgttc attccatccc tccctgtgtc atcttgtgac
     1981 catgacagga tgagggtcgc ttgccgttgc gtcaatgatt ccgtgatcgc gcgccggttg
     2041 tcgctgataa ggcccgatca atctttaatg cttcaagggc cacctaaagg cttgccagat
     2101 cggtgttttg gcgggcagtc ttgcgatcac ggtcgcaaga gggtcacgag gaaggcccgg
     2161 atcgaacagg gaggtaagac gatgaccaag acgaatgaaa ctgcggggcc ggtgtcgcgg
     2221 cgctcgttcc tgcgccgtgg cggcgctgtc gccggcggtg ccgccgccag cacgctgctg
     2281 gccgcgccgg cggttctggc gcaatcgccg atggtgctga agatgcagac cagctggccc
     2341 gcgtctgaca tctggcagac catggcgcag caatacgtgg accgggtcga ggcgatgtcg
     2401 ggcgggcggc tgaagatcga cctgctgccg gcaggcgcgg tcgtgggcgc ctttcaggtc
     2461 atggacgggg tcagcgacgg ggtgatcgac atcgcccatt cggtcgcggc ctattggtat
     2521 ggcaagaaca aggcggcgtc gctgttcggc accggcccgg tcttcggcgg cgatcccacc
     2581 aacatgctgt cgtggttcta ccagggcggc ggccaggatc tgtatcgcga actgacgcag
     2641 gattcgatgg ggctgaacgt gatcggcatg ttcggctttc cgatgcccgc ccagcccttc
     2701 ggctggttca agaacccgat caacggggtc gacgacatca aggggatcaa gtaccgcacc
     2761 gtcgggcttg cggcggatct gctgcaatcc atgggcatgt cggtggccca gcttcctggc
     2821 ggcgagatcg tgcctgcgat ggaacgcggc gtcatcgacg cgttcgagtt caacaaccag
     2881 tcctcggaca tgcgattcgg cgctcaggac gtggccaaga actattatct gggcagctat
     2941 caccaggcct ccgaggcgtt cgagtttctc ttcaaccgcg acctgatgga gacgctggac
     3001 cccgatctgc gcgcaatcct ggaacatggg gtcgaggcgg tttcgaccta taacaccgcc
     3061 ttcgcgctgg acaattattc gtccgacctg cagaagctgc gcgacggcgg cgtgacggtg
     3121 cgcaagaccc cgcaggacat cctgtcggcc cagcttgacg cctggtccga gatgatcacc
     3181 acgcttgaac aggatccctt catcaagaag gtgctggaca gccagcgcga ctgggtcaag
     3241 cgcacggtgt tctacgaact gatggacaag cccgactaca cgctggccta cgaacatttc
     3301 ttccccggcg agctgaagct ttaaatcaga cagggcccgt tccgccacac agcgcggggc
     3361 gggcctgacc gaaagggttt cccatgctgt ccttcatccg cttcgccgac aacctgtcgg
     3421 gatggttcgg caagtcgttc ggctggctca ttctgctgat gaccttcggc gtcagctacg
     3481 aggtcttcgt gcgctacgtg ctgaacagcc cgacaagctg gtcgctggat gtgtccttca
     3541 tcatgtatgg aacgctgttc atgatgggcg gagcctatac cctgtcgcgc ggcggccatg
     3601 tcaggggcga tttcctctat cggctctggc ctgtcagggt gcagggcgcg gtggatttcg
     3661 tcctgtacct gctgttcttt tttcccggtg tcaccgccct gatcctgtcg ggctggaaat
     3721 atgccagcag gtcctggcaa tacggcgagg tcagcgtgaa cagccccgcc ggcatcccga
     3781 tctatcaatt caagtcggtc atcgtggcgg cggggatcct gctgttcatc cagggcctgg
     3841 cgcagctgat gcgcagcatc atcgccatgc gcgacggcgt ctggatcaag gccgacgagg
     3901 atgtcgagga aaccgaagaa cttctgctgc gcgatcaggc gccgcgggcc ggtgtgcatg
     3961 tcgactgacc tgcctgatcc cactgatccc agcacggaga cgcgcgcgtg acagatccgc
     4021 agattgccct gttcatgctg ggcatattca tcttcctggt ctttctgggc tttcccatcg
     4081 ccttcacgct gatggccctg gggatcggct ttggctatta cgcctatttc gatgccgcgc
     4141 gcatgtggcg tgcgctggac cggctgcccg aggatgcggc ctggctgacg cagaaatgga
     4201 cctggctcga aggattctac aacaaccgca tcttcgatct gttcatcaac cagacctata
     4261 ccgtcatgtc caacgaggtg ctgacggcgg tgccgctgtt cctgttcatg ggctatgtgg
     4321 tcgagcgggc caatatcgtc gatcggctgt tctcgacgct ggcgatcgcc tcgcgccgga
     4381 tgcccggttc gatgggtgtg gccgcgctga tcacctgcgc gctgttcgcc accgcgaccg
     4441 gcatcgtcgg tgccgtggtc acgctgatgg gattgctggc gctgccggca atgctgaagg
     4501 cgcgctatga cccgcgcttt gccagcggca tcatctgcgc cgg
//
LOCUS       DTVW01000644            1335 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1786900, whole
            genome shotgun sequence.
ACCESSION   DTVW01000644 DTVW01000000
VERSION     DTVW01000644.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1335)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1335)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1335
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1786900"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(41..1078)
                     /locus_tag="EYO87_08520"
     CDS             complement(41..1078)
                     /locus_tag="EYO87_08520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008028743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HIC66026.1"
                     /translation="MPEDARLYLRHVEKGETIRALAREAGCHASTILRRIRRFEARRD
                     DPLIDGALNAAADVARPVVTDGRQAMRVLRRLAEPGAVMGTADGMEKAIITRNDIRTA
                     VLPRALAETMALKGWVVQMSGSARIQRYAIAPAGRDALRAMLRSPRQRNAVPGPQEFS
                     DARPVPGKADETAPDHAEQHRVWENRLIQDPEDGKRRRARVNIAESPLLLLARRRDLD
                     GRPFLTPGMVGAGERLREDFELAQMGPRITQNWDGFMTAGIDVSYHAGGYRGGSESAR
                     DRVAVALRDLGPGMGDIVLRVCCFLEGIEQTERRLGWSARSGKIVLRLALMRLERHYA
                     ETYGTGSRLIG"
BASE COUNT          241 a          466 c          405 g          223 t
ORIGIN      
        1 gccctttcgg acgcccttgg ccaaaatgtc acggcatggc tcagccgatc agacgcgaac
       61 cggtgccgta ggtttcggca taatggcgtt ccaggcgcat caacgccaga cgcaacacga
      121 tcttgcccga ccgcgccgac cagccgagac gcctttcggt ctgctcgatt ccctcgagga
      181 agcagcagac ccgcagcacg atatcgccca tgccgggccc cagatcgcgc aacgcaaccg
      241 cgacccgatc acgcgcggat tccgatccgc cccggtaacc gccggcatga tacgagacat
      301 cgatacccgc ggtcatgaag ccgtcccagt tctgcgtgat gcgcggtccc atctgcgcca
      361 gctcgaaatc ctcgcgcagc ctctcgcccg ccccgaccat cccgggcgtc aggaacggcc
      421 gtccgtccag atcccgacga cgcgccaaca gcaaaagcgg gctttcggcg atgttgacgc
      481 gggcgcggcg gcgcttgccg tcttcgggat cctggatcag ccggttttcc cagacccgat
      541 gctgttcggc atggtcgggc gccgtctcgt cagccttgcc cgggacgggg cgggcatcgc
      601 tgaattcctg cggcccggga accgcgttgc gctggcgggg cgaacgcaac atggcgcgca
      661 acgcatcgcg ccccgccggc gcgatcgcat agcgctggat ccgggccgag ccggacatct
      721 ggaccaccca gcccttcagc gccatcgtct cggccagggc gcgcggaagg acggcggtgc
      781 gaatatcgtt gcgggtgatg atcgcctttt ccatgccatc ggccgtgccc atgaccgcgc
      841 ccggttcggc cagccgtctc agcacgcgca tcgcctggcg accgtcagtg accacaggcc
      901 gcgcgacatc ggcggccgcg ttcagcgcac cgtcgatcag cggatcgtcg cgccgggcct
      961 cgaagcggcg gatccggcgc aggatcgtcg aagcgtggca acccgcctcg cgcgccaggg
     1021 cacggatcgt ttcccccttc tcgacatggc gcagataaag gcgcgcatct tcgggcagat
     1081 cggcggcggt ggcaggcgtg gcgctggttt ccgatcggtg ctccgcaaag cttgcatcga
     1141 ttgcgaactc accggtcaaa atggtcatgt cttgtccctc gtcatcctcg gatggacctg
     1201 gcagatggac caccctgggt tgaatgaaag cccgttaaaa acaggctaat ttatccacat
     1261 agacgcaaca ttccctaaca aatcctaaag atttctttcc cctccgcgcg gtgcatcaaa
     1321 gggtaaggca acaca
//
LOCUS       DTVW01000645            3194 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1787097, whole
            genome shotgun sequence.
ACCESSION   DTVW01000645 DTVW01000000
VERSION     DTVW01000645.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3194)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3194)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3194
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1787097"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
BASE COUNT          526 a         1084 c         1030 g          554 t
ORIGIN      
        1 cggtgcctcg tccacgctga gcctggctct ggcggggggc gagactaaga cggtgcgcgc
       61 cgccctgccc ggccagacga tcacctcgat cgacggctat ttccgctttg atcacccgcc
      121 ggtcgatgac gtggtgacat tctcgatcaa tccgctgaac acctcggccg atcaggcgac
      181 cgatccggcc gcgaccgcgc cctggaagcc gccggcacgg cagttcctgg cccagtggcg
      241 gcaggttctg gcgcggatca ccccgaagac cgtcaccatc gagggcacgg caagctacga
      301 gaacgacgat cagaaggcga agtacaatta cctgctgtcg cagcgccgcg cgcagggtct
      361 ggatgcgctg atccgcaacg atccggcgct gtcgggcttt accgtcaatt tcctgcccgt
      421 gcccgtcgcc gccagcgccc agccggcagg cgcctggacc acgggctgga aaacccatgg
      481 cagcccgcgc gagcaatggt ggaaggccaa tatccgcgat ttctccgtga cccttcccgg
      541 tccggtgatc gagggcgagg cgagacgccc cgccgcgccc gagccgcccc ccgcggtgcc
      601 gccggcgcgc gatgtgccgc ccgacaatcc gccgccaccg ccatggttcc gccaggcacg
      661 gctgaagatc cgtatcgtgc aggatcagtt cgtcgccgtc gaattgtccg gccaggtcga
      721 tttcgaaacc gcgctggaat cgcagatgga cacctcgggc ggcaacacca tccccgacat
      781 tcgcgggctg ggcaacaatc ccgccgacgg gatcaccgat ttcctgtttc tctaccagac
      841 cgatccggcc agccagaccg acgagatcaa gctgtatatc ggggccgatc ccaacgaccg
      901 cgacgggctg gtgatgaccg gtcagttgca gggtcaggcg cttgaggccc ccaataccgc
      961 gcgcaacatc cttggcatga cgacgatctt cacgccgctt ctggccgaaa tcgcgcccgc
     1021 caatcccgcc gatggcggcg tcgcgcccat catcctgtcg gccgccgtga tcgccctgcc
     1081 ctcggcgctg gccgagatcc gcatcgacgg gacgccgctt ctgaatgtcg aacgtgtcgt
     1141 gctgttcggc ggcgagggca agttccgccg cgtcggcgac cggtgggaaa ccgtgatcct
     1201 gttcgacgtg gaaacggcga tttcggcccg gatcaagctg ggcggtttcc tgctgctgga
     1261 aatcccgcgc gatacgccgc tggcggtgcg ctacaaggcc atcgggctga aattcggcca
     1321 gcctccggga tcgaccgccg gctgggaatt gcggccggtc ttcgatcagt ccaagggcta
     1381 taccatcgac gtctcggggc cgggccagat tcgcctgccc gatccgctgg gcaagatcct
     1441 gcaggtgctg ggcgcgcgca tcgcccggac caacccgctg aacttcgaga tcgacctggg
     1501 ctttgccgtc gatctgggcg tgatcaccgt cgaacgcgcc cgcgtccgcc tgccgctgga
     1561 cccgctggga ccgcccgaac tgacagcctt cgccgccggg ctcaaggttc ccggcgtcct
     1621 ggaaggccgc ggctatatgg agatgaacaa ttccggcggc gcgatggaga tcaagggcgg
     1681 catcgacgtc tcgctgatcc cgatcaagct gcgcatcgca gcacaggtcg cggtggccca
     1741 gatccccgcg gcccagggcg gccccgccac cggcgtcgcc atcgcgctgg aggtggagtt
     1801 gcccgtcgcg atcccgctgg cgcaatcggg cttcggcatc tacggattcc tcggcctttt
     1861 cgcgatgcat tacgggcggg acgaggacgg catcacctcg ctgacgccgg cgctgacatg
     1921 gctgaaggac cgggcgcagg gcgatcccac gaaccttcag gcctggaagc cgcaggtcgg
     1981 ccgctgggcc tttggcgccg ggatcacgct gggcacgatg ggctcgccgg tgatcttcaa
     2041 cgtcaagggc atgttcctgc tggaactgcc cggaccgcgc atcatgctga tggtcaaggc
     2101 caagcttctg gcggtgctgc ctgaattgaa ggacaagaac gccgaaggca ccttcatgtg
     2161 cgtgatcgac ctggatttcg ggcggggcac gctgaccatc gggctgtcca tcgacttctc
     2221 gatcaagccc atcgtcgaga tcaagatccc catcgaggcc ttcttcaacc tcaagtccgg
     2281 cggcgactgg cacgtctatc tgggcacatt cgccggcagc gatctgcagg gccgtccgat
     2341 gcccggaccg atccggatcc ggatcttcga ggtcttcgac ggcgccggct acatgatggt
     2401 gtcggggcac ggcatcccgt cctacaaacc cacctggtcg aatttgcccg ccttgccgca
     2461 ggtgcaggga accgccctgg caaccgggct ggaagtctcg atcgtctggg gcaacacctc
     2521 gatcaacctc tatctgcggg tgaccgcagg ctttaacgcg gtgctgggat tcgagccgtt
     2581 ctatgtcggc ggcctgctgt atctgcgcgg cgaattgaag ctgttcatca tctcgctgtc
     2641 ggcctcggcc ggtctggccg tgcagatcgg ccagcgcatc gacgtgatcg gcggcgtcga
     2701 ggtcaagacc gagatcgcgc gcatcgacgg cgaggtctgc ggcgagctgg acctgttctt
     2761 cttcaccctc aagggctgcg tcaatttcca tctgggcgag cagaaccaga tcctgccgcc
     2821 ggcgcccaga ctggtcacgg cggcctctct ggtgggccgt tcgccggcgc tggccatggg
     2881 caccggcacg gatcgcaaga tcgacgccaa gatcggtgat gcggtggcgg cgaccgccca
     2941 gcccgcggcc gatgcgatgc cggtggtgcc gatcgattcc attccggtca tggtcatgtc
     3001 ggcgacgcct cgcgacgacg cgctgacgat cttcggggaa gatgttctgg gctcgcccgg
     3061 cgcgcctgcc gacggctttg tcaagcgcgg cgatttttcc tatcgctacg atctgaagac
     3121 ggtgacgctg gaaaccgccg tatcccgatt ggccgccgcc aaccagcgcg ggcgaatcgc
     3181 actacaagtt cgcc
//
LOCUS       DTVW01000646            1583 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1787747, whole
            genome shotgun sequence.
ACCESSION   DTVW01000646 DTVW01000000
VERSION     DTVW01000646.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1583)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1583)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1583
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1787747"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..698
                     /locus_tag="EYO87_08525"
     CDS             <1..698
                     /locus_tag="EYO87_08525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017997894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66027.1"
                     /translation="DPSMLSSPVANASTAGSEVTSVMAPLNEGSKLIEVPASQRTDLG
                     KVIYANHDMIRVMPQVEDLIAGVEWRQEKRSHAKTKATMDYTRDALGAGRIGLIFPSG
                     RLAKRQGLTLHERPWMASAAMIARKFGVPVIPLRIRARNSVLFYLLDAIHPTLRDVTL
                     FNEVLNKARQSYRITVGAPIDPATLPRGSDEAIAILRDAALSLPPPGEDAARLARGGG
                     AVVRPRRAKSRIA"
     gene            complement(723..1022)
                     /locus_tag="EYO87_08530"
     CDS             complement(723..1022)
                     /locus_tag="EYO87_08530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009620440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SelT/SelW/SelH family protein"
                     /protein_id="HIC66028.1"
                     /translation="MTDPTAARRAHLEITYCTGCNWLLRAGWYAQECLSTFGPDLQVT
                     IIPDDSGGVFRITLDGGDIWERRRDGGFPDIRTLKQAIRDRIDPGRALGHLDRPI"
     gene            complement(1022..>1583)
                     /locus_tag="EYO87_08535"
     CDS             complement(1022..>1583)
                     /locus_tag="EYO87_08535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017997893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glutamate 5-kinase"
                     /protein_id="HIC66029.1"
                     /translation="PKTDPQARHLPIIAQLTPAIEAMGGDPVSGLSRGGMKTKLMAAR
                     TAVAGGCAMVIAEGSVMRPLSAVAGGARCSWFLPEGDPQAARKRWIAAMKPKGVLTVD
                     QGAAEALRRGKSLLPAGVRAVAGDFGRGDPVAIAGPQGQTLGTGLARYTADEARRIAG
                     HRSAEIESLLGYPGRAALIHRDDMAL"
BASE COUNT          249 a          559 c          550 g          225 t
ORIGIN      
        1 cggacccgtc gatgctgagc tcgcccgtcg ccaacgcctc caccgcggga agcgaggtca
       61 cgagcgtgat ggcgccgctg aacgaggggt cgaagttgat cgaggtcccc gccagccaga
      121 ggaccgatct cggcaaggtc atctatgcca atcacgacat gatccgggtc atgccccagg
      181 tcgaggatct gatcgcgggg gtggaatggc gccaggaaaa gcgcagccac gccaagacca
      241 aggccacgat ggattacacg cgcgatgcgc ttggcgcggg ccggatcggg ctgatcttcc
      301 cttcgggccg actggccaag cggcagggcc tgaccctgca cgaacgcccc tggatggcca
      361 gcgccgcgat gatcgcgcgc aagttcggcg ttccggtcat cccgcttcgc atccgcgccc
      421 gcaattcggt cctgttctac ctgctggacg cgatccatcc gacgctgcgc gacgtgaccc
      481 tgttcaacga ggtgctgaac aaggcgcgcc agagctatcg catcaccgtc ggcgcgccga
      541 tcgatccggc cacgctgccc aggggcagcg acgaggccat cgcgatcctg cgcgacgcgg
      601 cgctgtcgct gccgccgccg ggcgaggatg cggcacggct ggcgcggggc ggcggggcgg
      661 tcgtgcgccc gcgccgggcg aaaagccgca tcgcctgagc ccggccccgg ccggcacccg
      721 gctcagatcg gccggtccag gtgtcccaat gcgcggccgg ggtcgatccg gtcgcggatc
      781 gcctgtttca gggtccggat gtcgggaaat ccgccatcgc gcctacgctc ccagatgtcg
      841 ccgccgtcca gcgtgatgcg gaagacaccg ccactgtcgt cgggaatgat cgtgacctgc
      901 aaatcagggc cgaaggtcga cagacattcc tgcgcatacc agcccgcccg aagcagccag
      961 ttgcagccgg tgcaataggt gatctccaga tgcgcgcgtc gggcggcggt cgggtccgtc
     1021 atcacagggc catgtcgtcg cgatgaatca gggcggcacg gccgggatag cccagcagcg
     1081 attcgatctc ggccgagcgg tggccggcga tccggcgggc ctcgtcggcg gtatagcggg
     1141 caaggccggt gcccagcgtc tggccctgcg gacccgcgat cgcgaccgga tcgccgcgcc
     1201 cgaaatcgcc cgcgacggcg cgcacgccgg cgggcaacag ggatttgccg cggcgcaacg
     1261 cctcggcggc gccctgatcg acggtcagaa cgcccttggg tttcatcgcc gcgatccagc
     1321 gtttgcgcgc ggcctgggga tcgccctcgg gcaggaacca gctgcaccgc gcgccgcccg
     1381 ccaccgccga aagcggccgc atgaccgacc cttcggcgat caccatcgcg cagcccccgg
     1441 ccacggcggt gcgcgccgcc atcagcttgg ttttcatgcc gcccctggac aggccggaga
     1501 ccggatcgcc gcccattgcc tcgatcgcgg gtgtcagctg cgcgatgatc ggcagatggc
     1561 gcgcctgcgg atcggtcttg gga
//
LOCUS       DTVW01000647            1088 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1787997, whole
            genome shotgun sequence.
ACCESSION   DTVW01000647 DTVW01000000
VERSION     DTVW01000647.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1088)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1088)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1088
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1787997"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..658
                     /locus_tag="EYO87_08540"
     CDS             <1..658
                     /locus_tag="EYO87_08540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010392818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="D-glycerate dehydrogenase"
                     /protein_id="HIC66030.1"
                     /translation="TNATADIALTLILMAMRRASEGEALLRAGKWTGWNPTQLLGGHV
                     SGATVGIIGMGRIGKAIARRCHLGFGMRVVFHNRSTVSSLDIPAQQMPGLCETLAAAD
                     VAVVAVPGGGGTRHMIGGPELRALGSAGYLVNIARGDVVEEAALIEALNSATIAGAGL
                     DVYEAEPHIPQALIQAPNVTLLPHLGTATETVRTDMGMRALQNLLDHRNGGRARDLVN
                     "
     gene            734..934
                     /locus_tag="EYO87_08545"
     CDS             734..934
                     /locus_tag="EYO87_08545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011749846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CsbD family protein"
                     /protein_id="HIC66031.1"
                     /translation="MNWDVVQGKWKQVKGSVQEKWGELTNDELDQIDGNKDRLAGKLQ
                     EKYGWSKDEADREIDNYFRDSV"
BASE COUNT          202 a          317 c          385 g          184 t
ORIGIN      
        1 gacaaacgcc accgccgata tcgcgctgac gctgatcctg atggcgatgc gtcgggccag
       61 cgagggcgag gcgctgctgc gcgcgggcaa atggaccggc tggaacccga cgcagcttct
      121 gggcggccat gtcagcggcg cgacggtcgg catcatcggc atgggccgga tcggcaaggc
      181 gatcgcccgg cgctgccatc tgggattcgg gatgcgggtc gtctttcaca accgctcgac
      241 cgtttcctcg ctggatattc ccgcccagca gatgcccggc ctgtgcgaga ccctggcggc
      301 cgctgatgtg gcagtggtcg cggttcccgg cggcggcggc acccggcaca tgatcggcgg
      361 gccggaactg cgcgccctgg ggtcggcggg ctatctggtc aatatcgcgc ggggcgacgt
      421 ggtcgaggaa gcggcgctga tcgaggcact gaacagcgca acgatcgccg gggcggggct
      481 ggatgtctac gaggccgaac cccacattcc gcaggccctg attcaggcgc ccaatgtcac
      541 cctgctgccg catctgggca cggccacgga aacggtgcgg acggatatgg ggatgcgggc
      601 attgcagaat ctgctggacc atcgcaacgg aggacgggcg cgcgatctgg tgaactgact
      661 tatgttggtt cttggaaccg cggcctctgt ccggccgttg ttcccgcgat catcaagacc
      721 aaaggaggtc gctatgaatt gggatgttgt ccaaggcaag tggaaacagg tcaagggttc
      781 ggtccaggaa aagtggggcg aactgaccaa tgacgagctg gatcagatcg acggcaacaa
      841 ggatcgtctg gctggaaagc ttcaggagaa atacggctgg agcaaggacg aggccgatcg
      901 cgagatcgac aattattttc gcgacagcgt ctagggccga tccttgacgc gcgacagcga
      961 ggggcgccgg gaaggcgccc tttttcatgg cgcccggctg ttcgatgatg cggccggcgg
     1021 cggtcgggct tgctccgggg ctctttccat ccggccgcaa atcccggaat atgcagccat
     1081 gaccaaga
//
LOCUS       DTVW01000648            1515 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1788499, whole
            genome shotgun sequence.
ACCESSION   DTVW01000648 DTVW01000000
VERSION     DTVW01000648.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1515)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1515)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1515
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1788499"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..389)
                     /locus_tag="EYO87_08550"
     CDS             complement(<1..389)
                     /locus_tag="EYO87_08550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010398382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate--tetrahydrofolate ligase"
                     /protein_id="HIC66032.1"
                     /translation="MTSDIQIARAAQKLPIQDIAARLGLGARDILPHGHDKAKITHDA
                     LARLPVHKAGRLILVTAINPTPAGEGKTTTTVGLGDALNRIGKRTTICIREASLGPNF
                     GMKGGAAGGGRAQIVPMEEMNLHFTGD"
     gene            complement(447..869)
                     /locus_tag="EYO87_08555"
     CDS             complement(447..869)
                     /locus_tag="EYO87_08555"
                     /inference="COORDINATES: protein motif:HMM:PF00582.24"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HIC66033.1"
                     /translation="MPDTILLPIDLQHPESWEEALPAARAQAGATGTIHLLGIVLDIG
                     SSMVATYLPKGFEKQALEAMKDALDNFAEQQMPGEKVVTHVGHGHVAETILRSADRIG
                     ADLIVMASHQPDELRSILISSHANAVVRHAPISVLVVR"
     gene            complement(862..>1515)
                     /locus_tag="EYO87_08560"
     CDS             complement(862..>1515)
                     /locus_tag="EYO87_08560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009211339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3394 domain-containing protein"
                     /protein_id="HIC66034.1"
                     /translation="ALPFLFIFNTDLLLINVDWIHGIFVFITATVAMLLFAAATQGWF
                     LVRNRIWETVLLLLVAFAIFRPGFFMDYIYPPYDDLPPTEFAQALQDSPVGDPLRLRV
                     AGLNDVGDPVEFTALLEVPQGATGEERMQALGIETIRNGDEVVIDNVAFDSPAQAAGL
                     DWDQKILLVRAPAPAPSKYWIYIPALLILALVVWLQRRRIEPDESTPRRREKGLSHA"
BASE COUNT          262 a          499 c          490 g          264 t
ORIGIN      
        1 aaatcgccgg tgaaatgcag gttcatctct tccatcggca cgatctgggc ccggcccccg
       61 ccggcggcgc cgcccttcat gccgaaattc ggccccaggc tggcctcgcg gatgcagatc
      121 gtcgtgcgct tgccgatccg gttcagcgca tcgccaagtc cgacagtggt cgtggtcttg
      181 ccctcgcccg cgggcgtcgg gttgatcgca gtgacaagga tcagccgccc cgccttgtgg
      241 acaggcagcc gggcaagcgc gtcatgggtg atcttggcct tgtcatggcc atggggaagg
      301 atgtcgcgcg cgcccagccc aagccgggcg gcgatgtcct gaatgggcag cttctgcgcg
      361 gcgcgggcga tctggatatc ggatgtcatg gcaccagaat gcccgaggct gcgcccctgt
      421 caacgcgcaa gccggccccc gtccgcctag cgcacgacaa ggaccgagat cggcgcatgg
      481 cgcacgaccg cattggcatg gctgctgatc aggatgctgc gcagctcgtc cggctggtgg
      541 ctggccatga cgatcaggtc ggcgccgatc ctgtcggcgc tgcgcaggat ggtttcggcg
      601 acatggccat gtcccacatg ggtcacgacc ttctcgcccg gcatctgctg ttcggcgaaa
      661 ttgtccagcg catccttcat cgcctccagc gcctgtttct cgaacccttt tggcagatag
      721 gtcgcaacca tggaggatcc gatgtccaga acgattccca gcagatggat cgtgccggtc
      781 gcgcccgcct gcgcgcgcgc ggcgggaagc gcctcttccc agctttcggg atgttgcagg
      841 tcgatgggca gcaggatcgt gtcaggcatg gctcagcccc ttttcccggc gccgcggcgt
      901 ggattcatcc ggttcgatcc ggcgccgctg cagccagacc accagcgcca ggatcagcaa
      961 ggcgggaatg tagatccagt atttcgacgg ggcgggcgcc ggtgcgcgga ccagcaggat
     1021 cttttgatcc cagtccagac ccgccgcctg agccgggctg tcgaaggcca cgttgtcgat
     1081 caccacctcg tcgccgttcc ggatcgtctc gatgcccagg gcctgcatcc gctcttctcc
     1141 ggtggcgcct tggggcacct ccagcagcgc ggtgaactcg acagggtctc cgacatcgtt
     1201 caagccggcc acccgcagcc gcaacggatc gcccacgggc gaatcctgca acgcctgcgc
     1261 gaattccgtg ggcggcaggt cgtcataggg cggatagatg taatccatga aaaagccggg
     1321 ccggaagatc gcgaaggcga ccagcagcag cagcaccgtc tcccagatcc tgttgcgaac
     1381 caggaaccag ccctgcgtcg cggccgcgaa cagcagcatc gccaccgtcg ccgtgatgaa
     1441 gacgaagatg ccgtggatcc agtccacgtt gatcagcaga aggtcggtgt tgaagatgaa
     1501 caggaaaggc agcgc
//
LOCUS       DTVW01000649            1867 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1790202, whole
            genome shotgun sequence.
ACCESSION   DTVW01000649 DTVW01000000
VERSION     DTVW01000649.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1867)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1867)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1867
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1790202"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..515)
                     /locus_tag="EYO87_08565"
     CDS             complement(<1..515)
                     /locus_tag="EYO87_08565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001033831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HIC66035.1"
                     /translation="MMLSVAIRHAFADFTLDARFEAPAGVTALFGQSGSGKTSIVNAV
                     AGLMRPDHARIEAGGTVLTDTAARRFLPPHRRGIGYVFQEARLFPHLSVRQNLLYGRR
                     FSHGGGAVQDRVVEMLGIGHLLQRRPAALSGGERQRVALGRAILSNPRLLLMDEPLAA
                     LDQARKDGILP"
     gene            complement(512..1207)
                     /gene="modB"
                     /locus_tag="EYO87_08570"
     CDS             complement(512..1207)
                     /gene="modB"
                     /locus_tag="EYO87_08570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002724676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter permease subunit"
                     /protein_id="HIC66036.1"
                     /translation="MPDWLSPEEWQAVALSLKVSAVAVLASLPPGLLVAYALARWRFA
                     GRGLLNGLVHLPLVLPPVVTGYLLLLTFGRRGSIGAFLDQFGIVFAFRWTGAALAAAI
                     MAFPLMVRAIRLAIEAVDPKLEQAASTLGASRPWVFATITLPLILPGILAGMILAFAK
                     AMGEFGATITFVSNVPGQTQTLPSAIYAFLQVPGGEGAAVRLVLIAVAIAMGALFLSE
                     ALSRAVARRIGGG"
     gene            complement(1209..>1867)
                     /gene="modA"
                     /locus_tag="EYO87_08575"
     CDS             complement(1209..>1867)
                     /gene="modA"
                     /locus_tag="EYO87_08575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001033832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="molybdate ABC transporter substrate-binding
                     protein"
                     /protein_id="HIC66037.1"
                     /translation="DLIAADFTTKTGDRVAISYAGSGQLARQIIAGAPADLFISANVA
                     WMDEVQDAGLVADGARKDLLGNRLVLIAPARKDGAPPDEIGPDTDLQGLLEGGKLAMA
                     LVDAVPAGQYGRAALVNLGLWDDVRADVAQADNVRAALALVSAGEAPLGVTYATDAVA
                     DPDVSVVGTFPAGSYPPIIYPAALLKNADDASARSFYQALSGKAAGQIFEAQGFRMLN
                     "
BASE COUNT          341 a          659 c          621 g          246 t
ORIGIN      
        1 tagggcagga ttccgtcctt gcgggcctga tccagcgccg cgaggggctc gtccatcagc
       61 agcaggcggg gattggacag gatcgcgcgg cccagggcca ccctctggcg ttcgcccccc
      121 gacagggctg cgggacggcg ctgcaacaga tgcccgatgc ccagcatctc gaccacgcga
      181 tcctgcacgg cgccgccgcc atgcgagaag cggcgtccgt aaagcaggtt ctgccgcacg
      241 ctgagatgcg gaaacagccg cgcctcctga aagacatagc cgataccgcg ccggtgaggc
      301 ggaagaaatc ggcgtgccgc ggtatccgtc aggacggtgc cgccagcctc gatgcgggcg
      361 tggtcggggc gcatcaggcc ggcgacggcg ttgacgatgc tggtcttgcc cgatcccgac
      421 tggccgaaca gggcggtaac gccggccggg gcctcgaatc gcgcatccag cgtgaagtcc
      481 gcaaaggcgt ggcggatggc gacggacagc atcatccgcc cccgatgcgg cgggccacgg
      541 cgcgcgacag ggcttcggac aggaacagcg cgcccatggc aatggcgacg gcgatcagga
      601 ccagccgcac ggccgcgccc tcgccccccg gcacctgaag gaaggcatag atggccgagg
      661 gcagggtctg ggtctggccg ggaacgttgg acacgaaggt gatcgtcgca ccgaattcgc
      721 ccatcgcctt ggcaaaggcc aggatcatgc ccgcaaggat tccgggcagg atcagcggca
      781 gggtgatggt cgcgaagacc catggccgcg aggcgcccag cgtcgaggcg gcctgttcca
      841 gtttcgggtc caccgcctcg atggccagcc ggatcgcgcg gaccatcagc ggaaaggcca
      901 tgatcgcagc ggccagcgcc gcgcccgtcc agcgaaaggc gaagacgatg ccgaactggt
      961 cgaggaatgc accgatgctg ccgcgccggc cgaaggtcag cagcagcaga tagccggtca
     1021 cgaccggcgg caggaccagc ggcagatgga ccagcccgtt cagaagcccg cggcccgcaa
     1081 accgccagcg cgccagcgca taggccacca gcaaacccgg cggcaggctg gccagcaccg
     1141 ccaccgccga gaccttcagc gacagcgcga ccgcctgcca ttcctccggg gacagccagt
     1201 ccggcacgct agttcagcat cctgaagccc tgagcctcga agatctgccc ggcggccttt
     1261 cccgacagcg cctgataaaa ggaccgcgcc gaggcgtcat cggcgttctt cagcaaggcg
     1321 gccgggtaga tgatcggtgg ataactgccg gctggaaagg tgcccaccac gctgacatcg
     1381 gggtcggcca cggcatcggt cgcataggtc acgcccaacg gcgcctcccc ggccgaaacc
     1441 agtgccaggg ctgcgcgcac attgtcggcc tgcgccacgt cggcccgcac atcgtcccac
     1501 aaccccagat tgaccagcgc cgccctgcca tattgcccgg ccggcacggc atcgaccagc
     1561 gccatggcca gcttgccgcc ctccagcaat ccttgcagat cggtgtcggg tccgatctcg
     1621 tccggcggcg caccatcctt ccttgcaggg gcgatcagca ccagcctgtt gcccagcaga
     1681 tccttgcgcg cgccatcggc caccagaccc gcgtcctgga cctcgtccat ccaggcgaca
     1741 ttggccgaga tgaacaggtc cgccggcgcc ccggcgatga tctgtcgggc caattgtccc
     1801 gatccggcat aggatatcgc cacccgatcg ccggtcttcg tggtgaagtc ggcggcgatc
     1861 aggtcca
//
LOCUS       DTVW01000650            1705 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1791624, whole
            genome shotgun sequence.
ACCESSION   DTVW01000650 DTVW01000000
VERSION     DTVW01000650.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1705)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1705)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1705
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1791624"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            149..547
                     /locus_tag="EYO87_08580"
     CDS             149..547
                     /locus_tag="EYO87_08580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011455560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma carbonic anhydrase family protein"
                     /protein_id="HIC66038.1"
                     /translation="MRGDNEEIRLGRGSNLQDLCVCHTDPGHPLVVGPNCTIGHRAIL
                     HGCTIGAGALVGMGATILNGAVIGAGALIGAGALIGEGKQIPAGALVMGAPGRVVRML
                     DEAAQADLLRSAARYRANAARFRAGLRRLD"
     gene            555..1682
                     /locus_tag="EYO87_08585"
     CDS             555..1682
                     /locus_tag="EYO87_08585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010395259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HIC66039.1"
                     /translation="MTREACRRVAGIMDGIPLPVLIVDAQARMIGANPAAEALFGPNL
                     LDRPFVTVIRHPAVLQALDRVLAPDRHPAPPPDPVLPTPPEGGAVLRAQIAADRRDVA
                     AEITVSRLAPSLGAGAVVAILDRSAAEEGEQLRRDFVANVSHELKTPLTAMTGFIETL
                     RGPARNDDKARARFLDIMEREAGRMNRLVGDLLSLSRVQAEERRRPQTLVDLPLLLRG
                     VLATMGPAAEALDVRVEATGLDGSQRLAGDADQLVQVFQNLVENALKYGGEGGYLGLH
                     LRRIPHEPMLRGPGWAVAIEDRGEGIDEIHLPRLTERFYRVDTHRSRAQGGTGLGLAI
                     VKHIVNRHRGRFRIESTKGQGSRFTVILPEAGAASGGSAGD"
BASE COUNT          244 a          570 c          635 g          256 t
ORIGIN      
        1 aatcgggcga cgccgtgcgc aagggcgaac cgctggcatt cgtcggcggc ctctttggag
       61 aagacccgat caagctcgtc agcgcccaag gcgaagtagg ggccggtgaa cagctcaccg
      121 aagcagatca ggtgcgctcc cgcgtccgct gcgcggcgac aacgaggaaa tccggctggg
      181 tcgcggatcg aaccttcagg atctctgcgt ctgtcacacc gatccgggtc atccgctggt
      241 cgtcgggcca aattgcacca tcggccaccg cgcgatcctg catggctgca ccatcggcgc
      301 gggcgcgctg gtcgggatgg gcgcgaccat cctgaacggc gcggtgatcg gggcgggggc
      361 gctgatcggc gcgggggcgc tgatcggcga gggaaagcag atcccggcgg gcgcgctggt
      421 catgggcgcg ccgggccggg tggtgcggat gctggacgag gcggcgcagg cggacctgct
      481 gcgctctgcg gcccgttatc gcgccaatgc ggcgcgcttc cgcgccggtc tgcggcggct
      541 ggactgaagc tgcgatgacg cgcgaggcgt gcaggcgcgt ggccgggatc atggacggca
      601 ttccgttgcc ggtgctgatc gtcgatgcgc aggcccgcat gatcggcgcc aatcccgccg
      661 ccgaagcgct gttcggcccg aatctgctgg accgtccctt cgtcaccgtc atccgccatc
      721 cggccgtgct tcaggcgctg gaccgggtgc tggcaccgga ccgccacccc gcgccgccgc
      781 ccgatcccgt gctgccgacc ccgcccgagg gaggggcggt cctgcgcgcc cagattgccg
      841 ccgaccgccg cgatgtcgcc gccgagatca ccgtttcgcg acttgccccc tcgctgggtg
      901 cgggcgccgt cgtcgccatc ctcgaccgct cggccgccga agagggggaa caactgcgcc
      961 gcgatttcgt cgccaatgtc agccacgagt tgaaaacgcc gctgaccgcg atgaccgggt
     1021 tcatcgagac cctgcgcggc ccggcgcgca acgacgacaa ggcgcgcgcg cggtttctgg
     1081 acatcatgga acgcgaggcg ggacggatga accggctggt cggcgatctg ttgtcgctga
     1141 gccgggtcca ggccgaggag cgccgccgtc cgcagaccct ggtcgatctg ccgctgctgc
     1201 tgcgcggggt gctggcgacg atgggcccgg ccgccgaggc cctggatgtg cgggtcgagg
     1261 caacgggact cgacggcagc cagcggcttg cgggggatgc cgatcagctt gtgcaggtgt
     1321 ttcagaacct ggtcgagaat gcgctgaaat atggcggcga gggggggtat ctcggcctgc
     1381 atctgcgccg catcccgcac gagccgatgc tgcgcggtcc cggctgggcg gtcgcgatcg
     1441 aggatcgcgg cgaggggatc gacgagatcc atcttccgcg cctgaccgag cggttctatc
     1501 gcgtcgatac ccaccgttcg cgggcgcagg gggggacggg cctcggcctc gccatcgtca
     1561 agcatatcgt gaaccgtcat cgcggccgct tccggatcga aagcacgaaa ggccagggaa
     1621 gccgcttcac cgtgatcctg ccggaggcgg gcgcggcgtc gggcgggtcc gcgggggatt
     1681 gaggtcgcgt cccgcgcgtc ccgcg
//
LOCUS       DTVW01000651            1400 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1792283, whole
            genome shotgun sequence.
ACCESSION   DTVW01000651 DTVW01000000
VERSION     DTVW01000651.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1400)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1400)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1400
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1792283"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..735
                     /locus_tag="EYO87_08590"
     CDS             <1..735
                     /locus_tag="EYO87_08590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007007342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="myristoyl transferase"
                     /protein_id="HIC66040.1"
                     /translation="TQRAAGADLMPVFAVYQHETGRLVFNADRDDIDTPADLDGLTYA
                     GFGSAWEEALITTIIRAAGGKGEFKTVTLGTSAYEALASGRADFTLEVATWEGVNARL
                     QGREQRAFRYADYGVPDQQTTFIGSRGEWLEANPETAKAFLAATRRGYAFAAENPEAA
                     AEILIGATEGMLGNPELIRASMQAIVDGGYLTDENGQVGTIQPDRIEAVGSFLVDAGI
                     LRDEAGDVLTEKPDFSTWFTNEYLDR"
     gene            complement(764..>1400)
                     /locus_tag="EYO87_08595"
     CDS             complement(764..>1400)
                     /locus_tag="EYO87_08595"
                     /inference="COORDINATES: protein motif:HMM:PF13545.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HIC66041.1"
                     /translation="AGVRAADLAGIDVQFQERSLAGWEVLFNQQDMSRDVYFLLSGAL
                     LAVYWTPEGREIIFSRFSTGSYLGELAALDDGDRSLAVVARAPTRVLVMPQKCFLSLF
                     ETVALVRHRVVTDLVSRVRALTARNMELTSFTVEQRVVSYLIALAVERGQLETGGVLD
                     HAPTHAEIAASIGANREIVSRTMTKLARRDILRTARQRIELLNPDALSAIL"
BASE COUNT          263 a          478 c          447 g          212 t
ORIGIN      
        1 acgcagcgcg ccgccggcgc ggacctgatg ccggtcttcg ccgtctacca gcacgagacc
       61 gggcgcctgg tcttcaacgc cgaccgcgac gacatcgaca cacccgccga ccttgacggg
      121 ctgacctatg ccggtttcgg cagcgcctgg gaagaggcgc tgatcactac gatcatccgc
      181 gcggccggcg gcaagggcga attcaagacc gtgacgctcg ggacctcggc ctacgaggca
      241 ttggccagcg gccgcgccga tttcaccctc gaggtcgcga cctgggaggg cgtcaacgcc
      301 agacttcagg gccgcgagca gcgcgccttc cgctatgccg attacggggt tcccgaccag
      361 cagaccacct tcatcggcag ccgtggcgaa tggctggagg cgaaccccga aacggcaaaa
      421 gcgttcctgg ccgccacccg ccgcggctat gcctttgccg ccgagaaccc cgaggccgcc
      481 gccgagatcc tgatcggggc gaccgaagga atgcttggca atcccgagct gatccgcgcc
      541 tcgatgcagg cgatcgtcga tggcggctat ctgacggacg agaacgggca ggtcggcacg
      601 attcagccgg accggatcga ggccgtcggc agcttcctgg tcgacgccgg gatcctgcgc
      661 gacgaagccg gcgatgtcct gaccgaaaag cccgatttct cgacctggtt cacgaacgaa
      721 tacctcgacc gttagcaacg tggcgcgccc ctgccgcagg attctagagg atggccgaca
      781 aggcatcggg gttcagcagc tcgatccgct gtcgcgccgt cctcaggatg tcccgccgcg
      841 caagtttcgt catcgtgcgg cttacgatct cgcggttggc gccgatgctg gccgcgatct
      901 cggcatgggt gggggcatgg tccaggacac cgccggtctc cagctggccg cgttcgaccg
      961 ccagggcgat gaggtacgag acgacacgtt gctcgaccgt gaagctggtc agttccatat
     1021 tgcgtgcggt cagcgcgcgg acgcgcgaca cgagatccgt gaccacgcgg tgccggacca
     1081 aagccacggt ttcgaacagc gacaggaagc atttttgcgg catcaccaga acccgcgtcg
     1141 gcgcccgcgc cacgaccgca agcgaccgat cgccgtcatc gagcgccgcc aattcgccga
     1201 gataggatcc ggtggaaaac cgtgaaaaga tgatctcgcg cccctcgggc gtccagtaaa
     1261 ccgccaagag agcgcccgac agcaggaaat agacgtcgcg cgacatgtcc tgctggttga
     1321 acagcacttc ccagccagcc agcgatcttt cctggaactg cacgtcgata ccggccagat
     1381 cggccgccct gacgcccgcc
//
LOCUS       DTVW01000652            1287 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1792972, whole
            genome shotgun sequence.
ACCESSION   DTVW01000652 DTVW01000000
VERSION     DTVW01000652.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1287)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1287)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1287
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1792972"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            225..>1287
                     /locus_tag="EYO87_08600"
     CDS             225..>1287
                     /locus_tag="EYO87_08600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66042.1"
                     /translation="MKITYSRLLVGLLLPLSTITAEELAPIPPNAKPGECYAKVLTPA
                     QYEMIEEKIVVKEATEEIVIEPAQYETIEKKVQVIPELKKLIPVPAKYKEVVESVEIK
                     PALRMWKTSLSKKALPVSQVLLDTIKAQGVDIDGATPKTCYKEYFQPPTYKVVAEDVL
                     VQNERNETEVIPAQFETLEEKIEVIPAVKQVVEIPAEYEYVEEKILVEEAKTVWKKGQ
                     NPAQKISGATGDIMCLVNVPAKYKSIKKLVVKSPARTEVQEIPAEIQTLAIQKVVQPA
                     TVQYTPVPATYITIEKKVPDTAASFMWTNAETGADKPWRATGHKICLVEKEAVTKDVK
                     KVVLDTPATVKEEIVPAVYE"
BASE COUNT          504 a          194 c          260 g          329 t
ORIGIN      
        1 gtacgagatg agtctctctt tacctctaaa gactttttag acgaaataga aaaagagtta
       61 ggttctagtt ttgatggagt aaagagtatg ggctttaaag tctaaaattt tgagtatttt
      121 tacaaaaact taaggctaaa attacaaaaa aaataatact gggcattgtt taagtaatta
      181 ttctgttata atatgtcaaa caaaaaataa tataagggaa agatatgaaa ataacatatt
      241 caagattact tgtggggcta ctgttgcctc tatcaactat aacagcagag gaattagcac
      301 ctattccacc aaacgcaaaa cctggagaat gttacgcaaa agtattaaca cctgcccagt
      361 atgaaatgat tgaagaaaaa attgttgtaa aagaagcaac agaagaaatt gtgattgaac
      421 cagcacagta tgagacgata gagaaaaaag tccaagtgat acctgagcta aaaaaactta
      481 ttcctgtacc tgcaaagtat aaagaggtag ttgagagtgt agagattaaa ccagccttac
      541 gtatgtggaa aacatcatta agtaaaaaag cattacctgt gagtcaagta cttctagata
      601 ctatcaaggc gcaaggtgta gatatcgatg gtgctactcc taagacatgt tataaagagt
      661 attttcagcc acctacatac aaggtagttg cagaagatgt tttggtgcaa aatgaacgta
      721 atgaaacaga ggttatccct gcacaatttg agacattaga agaaaaaatt gaagttatcc
      781 ctgcggtaaa acaagtagtg gaaatacctg cagagtatga gtatgtagaa gagaagatat
      841 tggttgaaga agccaaaact gtttggaaaa aaggtcaaaa tcctgcccaa aagatttctg
      901 gtgcaacggg tgatatcatg tgtcttgtta atgtaccggc aaaatacaaa agcattaaaa
      961 agcttgttgt aaaaagtcct gcaagaacag aagtgcaaga aatacctgct gaaatacaaa
     1021 ctttagctat acaaaaagtt gttcagccag caactgtcca gtatactcct gtccctgcaa
     1081 catatataac tatagagaaa aaagtaccag atacagcagc atcatttatg tggactaatg
     1141 cagaaacagg agcagataag ccatggagag caacgggtca taagatttgt ttagtcgaaa
     1201 aagaagctgt aactaaagat gtaaaaaaag ttgtgcttga taccccggca acagtaaaag
     1261 aagaaatagt tcctgctgta tatgaaa
//
LOCUS       DTVW01000653            2127 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1794185, whole
            genome shotgun sequence.
ACCESSION   DTVW01000653 DTVW01000000
VERSION     DTVW01000653.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2127)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2127)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2127
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1794185"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..335
                     /locus_tag="EYO87_08605"
     CDS             <1..335
                     /locus_tag="EYO87_08605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010396045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66043.1"
                     /translation="SATQASVGFQAGAQQYAHVLIFQTDAALAAFRAAPGWVAGADAY
                     YAVPAGGMSLGADTITAQYPVVAMIFGQSGLIAGAAIDGTKYSRIIPSALLTMANRNM
                     PSLGLPPG"
     gene            complement(381..1025)
                     /locus_tag="EYO87_08610"
     CDS             complement(381..1025)
                     /locus_tag="EYO87_08610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011749913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HIC66044.1"
                     /translation="MTPSRSSDPAAHERLYRSLRSRIMLGELPPGKPLTLRGIAQEYH
                     LSMTPAREAVRRLVAEGALSLSGSGRVTTPALSDDRIEELAALRALIEPELAARALPR
                     AHLALIDRLAQMNARIADAVERHDSVGYIRCNLDFHRMLYLRAQAPAMLAMLETIWLQ
                     LGPTMRALYGRVKRQEPPRHHRMILAALRAGDEPALRLAVRADVTRGLRHLTAA"
     gene            complement(1092..1781)
                     /locus_tag="EYO87_08615"
     CDS             complement(1092..1781)
                     /locus_tag="EYO87_08615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015501487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family peptidase"
                     /protein_id="HIC66045.1"
                     /translation="MAASIRIEDDLHVLLRRSARARRMILRVPRDGGAPVLTLPSHIP
                     EAEGRAFLESRLDWLRGASGRVPQPQRVQIGTAFPIEGRRLILTPAQTRLARIEGDRL
                     MLPANRPAGPVVQAFVKHLAHQRLGSACDRHAARLGRPFRAIVLRDTRSRWGSCTSDG
                     RIMFSWRLAMAPPEVLDYVAAHEVAHLAHMDHSPRFWAAVEALKPGYGTCRAWLRRHG
                     GDLLIWRFDSV"
     gene            1920..>2127
                     /locus_tag="EYO87_08620"
     CDS             1920..>2127
                     /locus_tag="EYO87_08620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011749911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02300 family protein"
                     /protein_id="HIC66046.1"
                     /translation="MPKEEWGTKRLCPHCATRFYDLQNDPMTCPACGAQFTLESLTDG
                     RGKTLVPEKAASRDTSEAAEEEDDI"
BASE COUNT          364 a          736 c          725 g          302 t
ORIGIN      
        1 attccgcgac gcaggccagc gtcggctttc aggccggcgc gcagcaatac gcccatgttc
       61 tgatcttcca gaccgacgcg gcgctggccg ctttccgcgc cgctccgggc tgggtcgcgg
      121 gcgccgatgc ctattacgcg gtgcccgccg ggggcatgtc gctgggggcc gatacgatca
      181 ccgcgcaata tccggtcgtg gcgatgatct tcggccagtc cgggctgatc gccggtgccg
      241 cgatcgacgg gacgaaatac agccgcatca ttccctcggc cctgctgacg atggccaatc
      301 gcaacatgcc gtcgctgggg ctgccgccgg gctgatcgac cggcagggac ggaatcgggc
      361 gacctgcggg gcgtgaagga tcacgccgct gtcaggtgcc gcaacccacg ggtgacgtcg
      421 gcgcgcaccg ccagccgcaa ggcgggttca tcgccggcgc gcagcgcggc caggatcatg
      481 cggtgatggc gcggcggctc ctgccgtttc acccggccat agagcgcccg catggtcggc
      541 cccagttgca gccagatcgt ctccagcatg gccagcatcg ccggggcctg cgcgcgcaga
      601 tacagcatcc ggtgaaaatc caggttgcag cggatgtaac ccaccgaatc gtggcgttcg
      661 acggcatcgg cgatgcgagc attcatctgt gccaaccggt cgatcagcgc aagatgcgcc
      721 ctcggcaggg cgcgggccgc cagttccggc tcgatcaggg cgcgcagggc ggcaagttcc
      781 tcgatccggt catccgacag cgccggcgtg gtgacgcggc ccgagcccga cagactcagc
      841 gcgccctcgg ccacaaggcg ccgcaccgcc tcgcgcgcgg gggtcatcga cagatggtat
      901 tcctgcgcga ttccgcgcag ggtcagcggc ttgccgggcg gcaattcgcc cagcatgatc
      961 cggctgcgga ggctgcgata aagccgctca tgcgcggcgg ggtcggacga tcgggacggg
     1021 gtcatgcgcg ccttgtgatc acaaatgcgc cgcccgtcaa tcccgcccgt caatcccacc
     1081 tggcaggccg atcagaccga atcgaagcgc cagatcagca gatcgccgcc atgacgccgc
     1141 agccaggccc gacaggtccc gtaaccgggc ttcagcgcct cgaccgcggc ccagaaccgg
     1201 ggcgagtgat ccatatgcgc cagatgcgcg acttcgtggg cggcgacgta atccagcacc
     1261 tcgggcgggg ccatcgccag ccgccacgag aacatgatcc gtccgtccga ggtgcaactg
     1321 ccccagcgtg atcgtgtgtc acgcaggacg atggcgcgga acggcctgcc cagccgcgcg
     1381 gcatggcggt cgcaggccga tcccagacgc tgatgggcca gatgtttcac gaaggcttga
     1441 acgacgggtc cggccggtcg gttggcaggc agcatcaggc gatcgccctc gatccgggca
     1501 agacgggtct gtgcaggggt caggatcagt ctccggccct cgatcggaaa ggccgtcccg
     1561 atctgaaccc gctgaggctg cggcacgcgc ccgctggccc cgcgcagcca gtcgagccgc
     1621 gattccaaga aggcgcgccc ctcggcctcg gggatgtgac tgggcagcgt cagcaccggc
     1681 gcaccaccat cgcgcggcac ccgcagaatc atgcgccgcg cccgcgccga gcggcgcaga
     1741 aggacgtgca ggtcgtcctc gatccggatg cttgcggcca tgtcccgccc cttctgcccg
     1801 accggccggc gcgcagcttg caacgccgcg cggggcctgt cagaaaagcc tttgacaccc
     1861 ctctggcgct gtggcagggg gaccaccgat ttccctaaac gcggcggaag gagaatgcca
     1921 tgcccaaaga ggaatggggc acgaaacgcc tgtgcccgca ttgcgcaacg cgcttttacg
     1981 atttgcagaa cgatccgatg acctgtccgg cctgcggggc ccagttcacg ctggaaagcc
     2041 tgaccgatgg acgcggcaag acgctggttc cggaaaaggc cgcctcgcgc gacacgagcg
     2101 aggccgccga ggaagaggac gacatcg
//
LOCUS       DTVW01000654            2257 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1796395, whole
            genome shotgun sequence.
ACCESSION   DTVW01000654 DTVW01000000
VERSION     DTVW01000654.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2257)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2257)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2257
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1796395"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..280)
                     /gene="rpsB"
                     /locus_tag="EYO87_08625"
     CDS             complement(<1..280)
                     /gene="rpsB"
                     /locus_tag="EYO87_08625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HIC66047.1"
                     /translation="MGMALPEFSLRQLLEAGVHYGHQTQRWNPRMAEFIYGDRNGIHI
                     VDLTQTVQMLDAALQVVRDTVAKGGRVLFVGTKRQAAGPIADAAEKSAQ"
     gene            complement(441..1991)
                     /locus_tag="EYO87_08630"
     CDS             complement(441..1991)
                     /locus_tag="EYO87_08630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018303151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trimethylamine methyltransferase"
                     /protein_id="HIC66048.1"
                     /translation="MTEDAVAERRGRRSGGGAARRAERTATRFEYARFISRNIPNLEI
                     LNDEALEIIEANAETVLAEIGVNFVDNPDALARWKEAGADIDGERVRLPRGLARQLCA
                     TAPASFTQHARNPERNVEIGGRNLVLAPVYGPPFVRDQAGGRRYATIEDFRNFVKLGQ
                     MSKWVHHSGGTVCEPTDVAVNKRHLDMLHAHMTLSDKPYMGSVTLPERAADSVEMSKI
                     LFGSDFVDRNTVMTSLININSPLTFDSVMMGALEVYARANQAAIISPFIVGGAMAPVT
                     VAGTLTQVLAEVMAGVAYSQLIRPGAPVIFGAFVTSIDMNSGAPTFGTPEAAQITLGA
                     GQLARRMGLPYRSAGSFCGSKLPDAQAAYETANTLNIGLLAGVNFMLHSCGWLEGGLV
                     SSYEKYVMDADQLGLLHRIAAGVDMSENGQAMDAIREVGPGGHYLGCDHTQANYKEAF
                     WRTGILDYKPFETWEEEGARDTATLAALKVARMLGEYQAPDLDPGIAEALSEYVAGRK
                     AAVPDSFM"
     gene            2180..>2257
                     /locus_tag="EYO87_08635"
     CDS             2180..>2257
                     /locus_tag="EYO87_08635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015915329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin III family protein"
                     /protein_id="HIC66049.1"
                     /translation="MQFRFGRDYDFLETLADAIVHGVGVV"
BASE COUNT          360 a          762 c          710 g          425 t
ORIGIN      
        1 actgagccga cttttctgcc gcatcagcga tcgggccagc ggcctgacgc ttggtgccga
       61 cgaacagcac gcggccgccc ttggcgacgg tgtcgcgcac gacctgcagc gcggcgtcca
      121 gcatctggac ggtctgggtc agatcgacga tgtggatgcc gttgcggtcg ccatagatga
      181 attccgccat gcgcggattc cagcgttgcg tctggtggcc gtaatggacg ccagcttcaa
      241 gaagctgacg cagggaaaat tcgggaagcg ccattccaat gtcctttccg gtttgcgcct
      301 tggcaggggt tctgaaggct tttgcctcaa ccggtggacc cacggggatg tctgtccgca
      361 aggcccgccc actgcctgtg aagtgagcgc gcagatagac gctgcgcgca cgctttgcaa
      421 ggggtaacgg gcctgtccgc tcacatgaag ctgtcgggca cggcggcttt ccggcccgcg
      481 acatattccg acagcgcctc ggcgatgccc ggatccagat cgggggcctg atactcgccc
      541 agcatcctgg cgaccttcag cgcggccagc gtcgccgtgt cgcgcgcgcc ttcctcctcc
      601 caggtttcga agggcttgta gtccaggatg ccggtgcgcc agaaggcttc cttgtaattg
      661 gcctgcgtat ggtcacagcc cagataatgc ccgcccggcc ccacttcgcg gatcgcgtcc
      721 atggcctgcc cgttctcgga catgtccacg cccgccgcga tccggtgcag caggcccagc
      781 tgatcggcgt ccatcacgta tttctcgtag ctgctgacaa gcccgccttc cagccagccg
      841 caggaatgca gcatgaagtt cacccccgcc agcagcccga tattcagcgt gttcgcggtc
      901 tcgtaggccg cctgtgcatc cggcagcttc gatccgcaga acgagcccgc gctgcgatag
      961 ggcaacccca tccgccgggc cagttgcccc gcccccagcg tgatctgggc ggcctcgggc
     1021 gtgccgaagg tgggcgcacc gctgttcatg tcgatcgagg tgacgaaggc gccgaagatc
     1081 accggcgcgc cgggacggat cagctggctg taggccacgc ccgccatcac ctcggccaga
     1141 acctgcgtca gcgtgcccgc gacggtgacg ggcgccatcg cgccgccgac gatgaaggga
     1201 ctgatgatcg cggcctgatt ggccctcgca tagacctcca gcgcgcccat catcaccgaa
     1261 tcgaaggtca gcgggctgtt gatgttgatc aggctggtca tcaccgtgtt gcggtcgacg
     1321 aaatccgacc cgaacaggat cttcgacatc tcgaccgaat cggccgcgcg ttccggcagg
     1381 gtcaccgaac ccatgtaggg cttgtccgac agggtcatgt gggcgtgcag catgtccaga
     1441 tggcgcttgt tcaccgccac gtctgtcggt tcgcagacgg tgccgccgct gtgatggacc
     1501 catttcgaca tctggcccag cttcacgaaa ttgcggaaat cctcgatcgt ggcgtagcgc
     1561 cggccgccgg cctgatcgcg cacgaaaggc gggccgtaga ccggtgccag aaccagattg
     1621 cgtccgccga tctcgacatt gcgttcggga tttcgggcgt gctgggtaaa gctggccggc
     1681 gcggtggcgc aaagctgtcg cgccagcccc ctgggcagcc gcacccgttc gccgtcgatg
     1741 tcggcccccg cctccttcca ccgcgccagc gcgtcgggat tgtcgacgaa gttcacgccg
     1801 atttccgcaa gcaccgtctc ggcattggcc tcgatgattt ccagcgcctc gtcgttcaga
     1861 atctccaggt tcgggatgtt gcggctgatg aagcgcgcat attcgaagcg cgtcgccgtg
     1921 cgttcggccc ggcgcgcggc cccgcctccg ctgcggcggc cacggcgttc ggcgacggca
     1981 tcctcggtca tggcgatccc cttcctgcaa acatgactgc gtcccgtgat aggctgcgcg
     2041 ccgaaggccg tgctgcccgt ttgcgccttt cccttgccat gatgcgacat cgacgcgcgg
     2101 ccgcgacgct ttcacgcagg gttgaccaaa agggtgaatt gccttggctt cccgcctgcc
     2161 ccatcttccg gggatgacaa tgcaattccg cttcggccga gactacgatt tcctggaaac
     2221 ccttgccgac gcgatcgtcc atggggtcgg cgtcgtg
//
LOCUS       DTVW01000655            1369 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1797917, whole
            genome shotgun sequence.
ACCESSION   DTVW01000655 DTVW01000000
VERSION     DTVW01000655.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1369)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1369)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1369
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1797917"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            127..>1369
                     /locus_tag="EYO87_08640"
     CDS             127..>1369
                     /locus_tag="EYO87_08640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010393896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HIC66050.1"
                     /translation="MSLLFLNDRRGEYPPSLYADTRRVLNPFGRISGELRADVAVVGG
                     GYCGLSAALHLARQGHDVVLLEAHRVGFGASGRNGGQIGSGQRQEVDWLEDRLGREAA
                     RRLWDLSQEAKSLVRALAAEADLPIRDGIAHACRSNEEVDHAARMAERLARDYGYDQV
                     QPLNRAALAALIGSSDYRGGDLDRGAGHLHPLNLSLGMARLAAEAGARIFEDSHVHRI
                     THARSATDKSVVHCDTGKIRCDHVILAGNGYIGNLAPKVAARVMPINNYIVATEPLGD
                     DFPEILPERSAVADTKFVVNYWRMDEDRRLIFGGGETVRYKFPQDIASVVQPHLLSVY
                     PQLEGVRLTHAWGGTLAITMNRMPCFARPAPNCLSASGFSGHGVAMATLAGRLMAQAV
                     TGQAGGFDAMAAVPTRAFPGGR"
BASE COUNT          216 a          437 c          475 g          241 t
ORIGIN      
        1 cgcacccatg cgcgaggtgc tgggcgagga attctgtgac gtctacgaat ccgtgaaacg
       61 caatgaatac aaggaattcc tgcaggtcat cagcccctgg gaacgcgaac atctgttgct
      121 gaacgtatga gcctgctgtt tctgaacgac cgccgcggcg aatatccgcc cagcctctat
      181 gccgatacgc ggcgcgtgct gaaccctttc gggcgcatca gcggcgagtt gcgggccgat
      241 gtggcggtgg tcggcggtgg ttattgcggt ctgtcggcgg cgctgcacct ggcccggcag
      301 ggccatgacg tcgttctgct ggaggcgcat cgggtgggct ttggcgcctc ggggcgcaat
      361 ggcggacaga tcggatcggg acagcggcaa gaggtcgact ggctggagga tcgcctgggg
      421 cgcgaggccg cgcgtcgcct gtgggatctg tcgcaagagg cgaagtcgct ggttcgcgcc
      481 ctggccgccg aggcggatct gccgatccgc gacggcattg cccatgcctg ccgcagcaac
      541 gaagaggtcg atcacgccgc gcgcatggcc gaacgcctgg cccgcgatta cggctatgac
      601 caggtgcagc cgctgaaccg tgccgcgctt gccgcgctga tcggcagcag cgactatcgg
      661 ggcggcgatc tggaccgcgg tgcgggccat cttcatccgc tgaacctgtc gcttggcatg
      721 gcgcggctgg ccgccgaggc cggcgcgcgc atcttcgagg acagccatgt ccaccgcatc
      781 acccatgccc gcagcgcgac cgacaagagt gtcgttcact gcgacaccgg caagatccgt
      841 tgcgatcacg tcatcctggc cgggaacggc tatatcggca atcttgcgcc gaaggtcgcg
      901 gcgcgggtca tgccgatcaa caattacatc gtcgcgaccg aaccccttgg cgacgatttc
      961 cccgagatcc tgcccgaacg cagcgccgtc gccgatacca agttcgtggt gaattactgg
     1021 cggatggatg aggatcgccg gctgatcttt ggcggtggcg agaccgtgcg ctacaagttt
     1081 ccccaggaca tcgcctcggt ggtccaaccg cacctgttgt cggtctatcc gcagcttgaa
     1141 ggcgtgcggc tgacccatgc ctggggcggg actctggcga tcacgatgaa ccggatgccc
     1201 tgtttcgccc ggccggcgcc gaattgcctg tcggccagcg gcttttcggg gcacggggtc
     1261 gcgatggcga cgctggcggg ccggctgatg gcacaggccg tgaccggcca ggccgggggc
     1321 ttcgatgcga tggccgccgt tcccacgcgc gcctttcccg gcggccgcg
//
LOCUS       DTVW01000656            2271 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1798678, whole
            genome shotgun sequence.
ACCESSION   DTVW01000656 DTVW01000000
VERSION     DTVW01000656.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2271)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2271)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2271
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1798678"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(838..1719)
                     /locus_tag="EYO87_08645"
     CDS             complement(838..1719)
                     /locus_tag="EYO87_08645"
                     /inference="COORDINATES: protein motif:HMM:PF01418.15"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MurR/RpiR family transcriptional regulator"
                     /protein_id="HIC66051.1"
                     /translation="MIETDTTDPTDATFSQRILAVGSRLSAVEARVIDWLSRNREHGL
                     RASAAEIATAAKTSDATVIRTARKLGYGGLAELRRALAEDLRRDLTLADRMANELARP
                     ARAAGLESSAQAFRDALEAIETMAPALVSDFVMTMRSARRIHVFGIGPSGFIAGYFAA
                     QLVRLGFDARAILRTGLQLADDLIGIGPGDAVIALAYDRPYPEVRALFDRASGLKLRS
                     VLVTSMGPHIPDLRAGILVRVPRGRTGGFGLHAGTLALLEGLLIALSASEPEKTRSAL
                     QRLNAARQALAGSAMGI"
     gene            1806..>2271
                     /locus_tag="EYO87_08650"
     CDS             1806..>2271
                     /locus_tag="EYO87_08650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019862586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66052.1"
                     /translation="MSPDFWTALFPAVAAAFLASLVEVVEAFTIVLAVGTTRGWRPAV
                     AGAAAAIVVLGLIVLTLGPALRFIPIRTLQLVVGILLLLFGTGWLRKAVLRWAGVIAL
                     HDESAAYAREAADLRSRTGAPRTLRWIAGIAAFKAVLLEGLEVAFIVIAIGAG"
BASE COUNT          387 a          750 c          753 g          381 t
ORIGIN      
        1 ccgccgcaaa tgcttttcat gccctgtccc ttttgcctct acggagggat ggaaacctca
       61 ttcgagggtc tgcctacaac ctaaaccggc tacaggttca agcagagaat gacccgcgcg
      121 gcaatgtcgc gccgcaatgt cgcacatgct cctggagggg tcgcgcaggc ggcgctgcgg
      181 cgaccgggtc ggagaaaaca gcatccgttc ttcaggccgc cggacgcagc cgaggtcatg
      241 cggcccggcg ggcccacgca cggatcatgc cgccaaagcc gtgccttgcg cctggggccc
      301 tcggtcatct gcgtgccgat ggcatcgaag aagccagcga actgcacccg tttgaacggc
      361 cgatgtccgt tgcggttcat caagcagacg ggcaaggggc cttgcccaga tcggacaggt
      421 caggtctgca atggcccggt cggtacgccc gccatcccgc ctggacgttt cgcgccacag
      481 gccaatctgg cgcggcgggg catccggcgt cgctggccgt cctggcgcgt cacgaggtga
      541 tagcgtccga tcgcagccgc ggcaatgcgg ttctggccgg acgatcgttg ccaggacagc
      601 cccccagcgg acctgctgcc gccccccccc gcgcaggccg aaccccgact ggcgtgcgtc
      661 ctgcccgaga tgacgctcgc ggacctgccg gtgttcgttc tcacgcacga aaaattccgt
      721 gccctgtctc ggattcgcgc ggtcttcgat gcgctggtcc agagagcgga agacgtgacc
      781 gtggggcagg ggcagaggtt cggaaatggc gggcgaacgg cgcgaaccgg atcgcggtca
      841 aattcccatg gccgaacctg caagcgcctg ccgcgcggcg ttcaatcgct gaagcgccga
      901 tctggtcttt tcgggctcgg atgccgaaag cgcgatcagc agcccctcca gcagggcgag
      961 ggtgcccgcg tgaagcccga agccgccggt ccggccgcgg ggaacccgca caaggatgcc
     1021 tgcgcgcaga tcgggaatat gcggtcccat cgaggtcacc agaaccgagc gcagcttcag
     1081 gccgcttgcc ctgtcgaaca gggcccgcac ctcgggatag gggcgatcat aggccagcgc
     1141 gatcaccgca tcgcccggcc cgatgccgat cagatcatcg gcgagttgca gtccggtgcg
     1201 caggatggcg cgtgcatcga aacccaggcg caccagctgc gccgcgaaat agccggcgat
     1261 gaagcccgac ggaccgatgc cgaagacatg aatccggcgc gccgaacgca tcgtcatgac
     1321 gaaatccgaa acgagcgcgg gcgccatcgt ctcgatcgcc tcgagagcgt cgcgaaacgc
     1381 ctgtgccgaa gactccagtc ccgccgccct ggcgggccgg gccagttcat tggccatgcg
     1441 atcggccagg gtcaggtcac gacgcagatc ctcggcaagc gcgcgacgca gttcggcaag
     1501 cccgccataa ccaagctttc gcgcagttcg gatcaccgtc gcgtcactgg tcttcgcggc
     1561 cgtcgcgatt tccgccgcag aggcgcgcag tccatgctcg cgattgcggg aaagccagtc
     1621 gatgacccgc gcctcgaccg ccgaaagccg cgacccgaca gccaggattc gctgcgagaa
     1681 ggttgcgtcc gtcgggtcag tcgtgtcggt ttcgatcatg ttgcaaatgc tacctcgatg
     1741 atgtagtaaa cacaacaata gagtcgcggc cgcaccgcag ccaggatcga ttgagagaag
     1801 gcttcatgtc gccggatttc tggaccgccc tttttcccgc cgtcgccgcg gctttccttg
     1861 catccctcgt cgaggtggtg gaggccttca cgatcgtgtt ggcggtgggc accacgcgcg
     1921 gctggcgacc ggccgtcgcc ggggccgccg cggcgattgt cgttctggga ctgatcgttc
     1981 tgacgctggg tccggcgctt cgattcatcc cgatccggac gctgcagctt gtcgtgggga
     2041 tcctgctgct gctgttcggc acgggctggc tgcgaaaggc cgttcttcgc tgggccggcg
     2101 tgatcgcgct gcatgacgag agcgcggctt acgcaaggga agccgccgat ctgaggtcac
     2161 ggacgggggc gccgcggaca ttgcggtgga ttgcaggcat cgccgcgttc aaggccgttc
     2221 ttctcgaagg cctggaggtc gctttcatcg tcatcgccat cggtgccggc a
//
LOCUS       DTVW01000657            3409 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1799131, whole
            genome shotgun sequence.
ACCESSION   DTVW01000657 DTVW01000000
VERSION     DTVW01000657.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3409)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3409)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3409
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1799131"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..323)
                     /locus_tag="EYO87_08655"
     CDS             complement(<1..323)
                     /locus_tag="EYO87_08655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011747535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urease accessory protein UreD"
                     /protein_id="HIC66053.1"
                     /translation="MFDAGHQVFPMQRSRGRARVAMAATGLLDLAQSGSARAILPLVT
                     AGLPEIVFLNTSGGLASGDDLSFAVDLRPGSRALATTQTAERAYRAEGPPAEARVALS
                     VGEGG"
     gene            complement(452..1204)
                     /locus_tag="EYO87_08660"
     CDS             complement(452..1204)
                     /locus_tag="EYO87_08660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HIC66054.1"
                     /translation="MQPFAKGRYLARMAETQADLHAAQRLRWICFLSRNGASASSERD
                     ADDLDARYRHVLIEDIRDHRLVCCFRFLPLSDGSRIGRSYSAQFYNLGALERFDGPMI
                     ELGRFCVDPQTRDPDIIRTAWAAITRHVDETGTQMLFGCSSFTGTEPDDHAEAFAMLK
                     ERHLAPRRWLPRVKAPKVFRFARALRLRKPDPRRAMAAMPPLLRSYLAMGGWVSDHAV
                     VDPAMQTMHVFTGVEVAAIPPSRKRLLRAVSG"
     gene            complement(1307..2422)
                     /locus_tag="EYO87_08665"
     CDS             complement(1307..2422)
                     /locus_tag="EYO87_08665"
                     /inference="COORDINATES: protein motif:HMM:PF01594.14"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HIC66055.1"
                     /translation="MSTEPRDRQDPDHKPSLSRRLDVPFATIVAVLALVLLLLAAWTW
                     SSVLLMGFAAILVAIALRAGAAVLHRSLGLGFKPGVLLTATAFVALFAALFSAVGPAV
                     SKQFSQLLSSLPDAWQQISDWLDQSSIAQFVERRIGDGMDGGGGATGSIPSIFGYVKG
                     TVTTIFGGLANLVLILIMAIFLGLDAPSYRSGFLRLVPLGYRERAGSVLDECGRSLGR
                     WMGGQALDMLVVALLTGTGLWLLGVPLALLLGLIAGLTNIIPVVGPFLSGVPAVMFAL
                     TQGVDQALYVALLFLVIQQIEGNILMPMIQKYAAHLPPVLTVLAIVAFGSMFGLFGVV
                     LATPLLLVSIILIQRLYVEDVLGDSPHDRRGGGGSPE"
     gene            2613..3035
                     /locus_tag="EYO87_08670"
     CDS             2613..3035
                     /locus_tag="EYO87_08670"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011538300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HIC66056.1"
                     /translation="MAIERTLSIIKPDATRRNLTGKINARFEEAGLRIIAQKRIKLSP
                     EQAGKFYEVHKDRPFYGELVEFMASEPVVVQVLEGEDAIAKNRDVMGATNPANAEEGT
                     IRKEFALSVGENSVHGSDAPETAREEIAFFFSGLELVG"
     gene            3238..>3409
                     /locus_tag="EYO87_08675"
     CDS             3238..>3409
                     /locus_tag="EYO87_08675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018000427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACP S-malonyltransferase"
                     /protein_id="HIC66057.1"
                     /translation="MRAFVFPGQGAQTIGMGRELAETYPAARDVFDQVDEALGEKLSD
                     LIWNGDIETLTLT"
BASE COUNT          634 a         1129 c         1130 g          516 t
ORIGIN      
        1 cagccgcctt cgccgacgct cagcgcgaca cgcgcctctg ccggcgggcc ctcggcgcga
       61 taggcgcgct cggccgtctg ggtggtcgcc aaggccctgc tgccgggccg cagatccacc
      121 gcgaaggaca gatcgtcccc cgaggcaagt ccgcccgagg tgttcagaaa gacgatctcg
      181 ggcaggccgg cggtcacaag cggcaggatc gccctggccg agcccgattg cgccagatcc
      241 agcagccccg tcgccgccat cgcgacgcgg gcgcggccgc ggctgcgctg catgggaaaa
      301 acctggtggc ctgcatcgaa catgatcgga aagggcgccg cctcgtgcac aaggtcaatg
      361 cgcgacttcg ggcctctgcc actttgaaag gcaaaatccc gttcgctgca tccgtctgcg
      421 gcgatgtgcc cgggaattgg gcagcgtcgc gtcagccaga caccgcccgc agcaggcgct
      481 tgcgggacgg ggggatcgcc gcgacctcga cgccggtaaa gacgtgcatg gtctgcatcg
      541 ccggatcgac gaccgcatga tcgctgaccc agcctcccat cgccagatag ctgcgcagca
      601 agggtggcat cgccgccatc gcgcggcgcg gatcgggctt gcgcaggcgc agggcgcggg
      661 cgaaacggaa caccttgggt gccttgacgc gcggcagcca gcggcgcggg gcaaggtggc
      721 gctccttcag catcgcgaag gcttcggcgt ggtcgtcggg ttcggtccct gtgaagctgg
      781 aacagccgaa cagcatctgg gtgccggtct cgtccacatg acgggtgatc gcggcccagg
      841 cggtgcggat gatgtcggga tctcgcgtct gcggatcaac gcagaagcgg cccagttcga
      901 tcatcgggcc gtcaaagcgt tccagcgccc cgagattgta gaattgcgcg gaataggaac
      961 gcccgatccg ggatccgtcc gagagcggca gaaagcggaa gcagcagacg agccggtgat
     1021 cacggatatc ctcgatcagc acatgacggt agcgggcgtc cagatcgtcg gcatcccttt
     1081 cgctgcttgc cgaagcgccg tttcgcgaca gaaagcatat ccagcgcagc cgctgcgccg
     1141 cgtgcagatc ggcctgcgtt tcggccattc tggccagata gcgtcccttg gcgaaaggct
     1201 gcatcctgcg cttgtcccgt ctgtcgcgcc actgggtcta gcccaatcat gtgtcggttt
     1261 ggcgaaagcg caatatcgaa gcggtgattt tccggcgctg cgcggtctat tccggggaac
     1321 cgccgccgcc gcgcctgtcg tgcgggctgt cgcccagcac gtcctcgaca tagagccgct
     1381 ggatcaggat gatcgagacc agcagcagcg gcgttgccag aacgacaccg aacaggccga
     1441 acatgctgcc gaaggccacg atggccagaa ccgtcaggac cggcggcaga tgggcggcgt
     1501 atttctggat catcggcatc aggatattgc cctcgatctg ctggatcacc aggaacagca
     1561 atgccacgta gagggcctga tcgacgccct gcgtcagcgc gaacatcacc gccggaacgc
     1621 ctgacaggaa cgggccgacc accggaatga tattggtcaa accggcgatc agacccagca
     1681 acagcgccag cggaacaccc agcagccaca gcccggtccc ggtcagcagc gccaccacca
     1741 gcatgtccag cgcctgtccg cccatccagc gccccagcga acggccgcat tcgtcaagca
     1801 cgctgcccgc ccgttcgcgg tagccaagcg ggaccagccg caagaaaccg ctgcgatagc
     1861 tgggtgcgtc aagacccaga aagatcgcca tgatcaggat caggacaaga ttggccagcc
     1921 cgccgaagat ggtggtgacg gtgcccttca catagccgaa gatcgacggg atgctgcccg
     1981 tggccccgcc gccgccgtcc atgccgtcgc cgatgcggcg ttcgacgaac tgggcgatgc
     2041 tgctctggtc cagccagtcg ctgatctgct gccaggcatc gggcaggctg ctcagcaact
     2101 ggctgaattg cttcgagacg gccggaccca cggcgctgaa caacgcggcg aacagggcca
     2161 cgaaggccgt ggccgtcagc aggacaccgg gcttgaagcc caggcccagg ctgcggtgca
     2221 gcaccgccgc gcctgcgcgc agcgcgatcg cgaccagaat cgcggcaaac cccatcagca
     2281 gcacgctgga ccaggtccag gccgccagca gcagcagcac gagggccagg accgcgacga
     2341 tggtggcgaa gggaacgtcg aggcgcctcg acaggcttgg cttgtggtcg ggatcctgtc
     2401 tgtcgcgcgg ctctgtgctc atgccgggtt ccttcggtgg cgtgacgatc tgggccaagg
     2461 actagcatgt tttggcgcac ccgacagtgc cggatccgcc gccgcgccgg catggccgct
     2521 ggtccttgcc gggcgcgggc aagcctgcta accggacgcg gattcattgc cgcgggcccc
     2581 agccgcctgc catcagacaa ggtagaacag acatggccat cgaacgcacc ctttcgatca
     2641 tcaagcccga cgcgacccgg cgcaacctga ccggcaagat caacgccagg ttcgaggagg
     2701 ccggcctgcg catcatcgcg caaaagcgca tcaagctgtc gcccgaacag gccggcaagt
     2761 tctacgaggt ccacaaggat cgccccttct atggtgaact ggtcgagttc atggcctccg
     2821 agccggtggt cgtgcaggtc ctggaaggcg aagacgccat cgcgaagaac cgcgacgtga
     2881 tgggtgccac caacccggcc aacgcagaag aaggcacgat ccgcaaggaa ttcgccctgt
     2941 cggtcggcga gaattcggtc cacggctcgg acgcgccgga aaccgcgagg gaagagatcg
     3001 ccttcttctt ctcggggttg gaactggtcg gctgaacagc cggacgttca acactctcgg
     3061 gaaaggggcc ttcgcggccc ctttttccct ttcgggaacc agccgccggg ccgatcattt
     3121 cgcgacgcgg cacccgcggc ccggcgccgc ccctgtcccg gggctgctgg cgcgagttgc
     3181 ggctgccgcc gccgcaggct aagtctcttt cggggattgt cagatcaggg ggccgcgatg
     3241 cgcgcattcg tttttccggg ccagggggcg cagaccatcg ggatggggcg cgagttggcc
     3301 gaaacctatc cggccgcgcg cgatgtcttc gatcaggtgg acgaggcatt gggcgagaag
     3361 ctgtcggacc tgatctggaa cggcgatatc gagaccctga ccctgaccc
//
LOCUS       DTVW01000658            1861 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1799323, whole
            genome shotgun sequence.
ACCESSION   DTVW01000658 DTVW01000000
VERSION     DTVW01000658.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1861)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1861)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1861
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1799323"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..414)
                     /locus_tag="EYO87_08680"
     CDS             complement(<1..414)
                     /locus_tag="EYO87_08680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015452015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HIC66058.1"
                     /translation="MTEERRQIREAMRALCDKFDDDYWLHKENNHEFPHAFRKAVAAE
                     GWLGITMPEEYGGAGLGVTEAALLMQTVAQSAGAISACSTFHINLFGPHPVLLYGTEE
                     QKRTIIPRLISGEDMVAFGVTEPDAGLDTTRITTRA"
     gene            complement(460..1311)
                     /locus_tag="EYO87_08685"
     CDS             complement(460..1311)
                     /locus_tag="EYO87_08685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004618789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HIC66059.1"
                     /translation="MEFSVTDGMTIVGDAAGPADGPRVILLHGGGQTRGAWRKTASIL
                     GDLGYRAVSIDQRGHGESDYSPDADYSPDAFKADLLAVMDHLGGTPILVGASLGGIIS
                     IFTAGEIDPSRVAALILVDVAVRTNPYGVKRIQDFMNANPDGFASVDEAADAVAAFST
                     DRPRKRDTSGLLRNLRKRGDRYYWHYDSLFLPVWHEAHVASRDRLRAAAQRITCPTML
                     LRGDHSDVIGEDEVRDLKGLIPHLDFVNIEDAGHMIVGDKNSAFNEAILRFLAAHPPR
                     HNPSPNT"
     gene            1463..>1861
                     /locus_tag="EYO87_08690"
     CDS             1463..>1861
                     /locus_tag="EYO87_08690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="thiolase family protein"
                     /protein_id="HIC66060.1"
                     /translation="MSHAQAIITGLGHAGPVRASDQSAEQLALVAIKAALSDAGLPPG
                     AVDAVVTESSLCPAATPLDRIAVSAGLTGLRRSAQSTPVGAGILAAVGMACDMVDRGE
                     ADTVLTWFATGWGSAAGGPTAYHEKMEAKAQ"
BASE COUNT          302 a          577 c          631 g          351 t
ORIGIN      
        1 ggcgcgggtc gtgatccggg tggtgtccag cccggcgtcg ggctcggtga caccgaaggc
       61 caccatgtcc tcgccggaga tgaggcgcgg aatgatcgtg cgtttctgtt cctcggtccc
      121 gtaaagcaga accgggtgcg gcccgaacag gttgatgtgg aacgtggaac aggccgagat
      181 cgcaccggcc gactgggcca cggtctgcat cagcagggcc gcctcggtca cgcccagccc
      241 ggcgccgccg tattcctcgg gcatcgtgat gccgagccag ccctcggccg cgacggcctt
      301 gcggaaggcg tgcggaaact cgtggttgtt ttccttgtgc agccagtagt cgtcgtcgaa
      361 cttgtcgcac agggcgcgca tcgcctcacg gatctggcgc cgttcctcgg tcatttccag
      421 accagaaggt tcaaactgga tcatctcggt ctctcttccc taggtatttg gtgacggatt
      481 gtgacggggc ggatgcgcag cgagaaagcg caggatggcc tcgttgaagg cgctgttctt
      541 gtcgcccacg atcatgtgcc ctgcgtcttc gatgttgacg aagtcgaggt gcgggatcag
      601 gcctttcagg tccctcacct cgtcttcgcc gatcacgtcg ctgtggtcgc cgcgcaggag
      661 catggtcggg caggtgatgc gttgcgcggc cgcgcgcagc ctgtcgcgcg atgcaacgtg
      721 ggcctcgtgc cagacgggca ggaacaggga atcgtagtgc caataatacc gatccccccg
      781 cttccgcaga ttgcgcagca acccgctggt atcgcgcttg cgcggccggt cggtcgagaa
      841 ggccgcgacc gcgtcggcgg cctcgtccac cgacgcgaac ccgtcggggt tcgcgttcat
      901 gaagtcctgg atgcgcttga ccccgtaggg attcgtccgg accgccacat cgacgaggat
      961 cagggcagcg accctggacg gatcgatttc gcccgcggtg aatattgata taatgcctcc
     1021 cagggaggca ccgacgagta tgggcgtgcc gccgaggtga tccatcaccg cgagcagatc
     1081 cgctttgaac gcgtcgggcg aatagtccgc atctggcgaa tagtcgcttt ccccgtgccc
     1141 ccgctggtcg atggacacgg ctcggtatcc cagatcgccg aggatggatg cggtcttgcg
     1201 ccaggcaccg cgggtctgcc cgcctccgtg aagcaggatg acgcggggac cgtccgcggg
     1261 accggcggca tcgccgacaa ttgtcatgcc gtcggtgacg gagaattcca ttctgtcggt
     1321 ctgaggcatg tctgctccct gcactgtcgg gcaacaacac cacgaccctt gcaattcgtc
     1381 aacatacgcg ttgatatatt ttgcggcgtt cgttaggatt gggtgcgacg tccgtatcgg
     1441 cgtcgttgga cgggagggcg tcttgagtca cgcacaggcg atcatcaccg gacttggcca
     1501 tgccggaccg gtccgtgcct cggaccagag cgcggagcag ctggcgctgg tcgccatcaa
     1561 ggcggccctt tcggacgccg gattgccgcc cggagcggtc gatgcggtcg tcaccgaatc
     1621 ctcgttgtgc cccgcggcga cgcccctgga ccggatcgct gtatcggccg ggcttaccgg
     1681 attgcgccga tcggcccaat cgacgccggt tggagccggg atccttgccg cagtcggaat
     1741 ggcttgcgac atggtggacc ggggtgaggc cgacactgtc ctgacatggt ttgcgaccgg
     1801 ctggggatcc gccgcgggcg ggccaacggc gtatcacgag aagatggaag ccaaggcgca
     1861 g
//
LOCUS       DTVW01000659            1048 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1799517, whole
            genome shotgun sequence.
ACCESSION   DTVW01000659 DTVW01000000
VERSION     DTVW01000659.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1048)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1048)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1048
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1799517"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..546
                     /locus_tag="EYO87_08695"
     CDS             <1..546
                     /locus_tag="EYO87_08695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008888203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HIC66061.1"
                     /translation="KWGKIDVLVSNAGIQIVHPLQDFPFADWKKLLSIHLDGAFLTSR
                     ACLPHMYKAGSGSIIFMGSVHSKEASPLKSAYVTAKHGLLGLARVISKEGGERGVRAN
                     VICPGFVKTPLVEKQIPEQARDLGISEDEVVNRVMLGETVDQEFTTIADVAEVAHIFA
                     AFPTNALTGQSLVVSHGWYMN"
     gene            810..>1048
                     /locus_tag="EYO87_08700"
     CDS             810..>1048
                     /locus_tag="EYO87_08700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008888096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66062.1"
                     /translation="MIDPVSTRTAGKSVCHVCGRSFPAPRLRPWISVRPGVSELIAAT
                     APGWGEGKQICQPDLARFRRDYVERLLADERGELA"
BASE COUNT          190 a          343 c          332 g          183 t
ORIGIN      
        1 aaatggggca agatcgacgt cctggtgtcc aatgcgggaa tccagatcgt ccacccgttg
       61 caggactttc cgttcgccga ctggaagaaa ttgctgtcga tccatctcga cggcgcattc
      121 ctgacatcca gggcctgtct gccgcatatg tacaaggccg gatcgggttc gatcatcttc
      181 atgggctcgg tccattccaa ggaagcctcg ccgttgaaat cggcctatgt caccgccaag
      241 cacgggcttc tgggccttgc gcgcgtgatc tcgaaggaag gcggcgaacg tggcgtgcgc
      301 gccaatgtga tctgccccgg cttcgtcaag acgccgctgg tggaaaagca gatccccgaa
      361 caggcgcgcg atctgggcat ctccgaggac gaggtcgtca accgcgtgat gctgggcgaa
      421 accgtcgatc aggaattcac cacgatcgcc gacgtcgccg aggtcgccca catcttcgcc
      481 gcctttccca ccaacgcgct gaccggccag tcgcttgtcg tcagccacgg ctggtacatg
      541 aactagcccc cgaaaggaca ggagaaccgg acgggcggcg cttttccggc cgggcctcgt
      601 ggtccggcgc cgcccgaacc gacacctcgg gcgatcctga cgggccacaa tcgccatcgc
      661 gaaaaggacg ccttccggct ggccggacac gccgcccctg cgaggatgcc gattggccgc
      721 gatcggacag acccctccgg ggttgaattt cccggcaaac gatagtccgc tcgtcatgtc
      781 ggcccgggcg gcgaaggatg aggtatggca tgatcgaccc ggtttccacc cggactgccg
      841 gaaagtccgt ctgccacgtc tgcggacggt cctttccggc gcccaggctg cgcccatgga
      901 tttcggttcg tccgggcgtg tccgaactga tcgccgccac ggcgcccggc tggggcgagg
      961 gcaagcagat ctgccagccg gaccttgcac ggttccgacg ggattatgtc gaaaggctgc
     1021 tggccgacga acgcggtgaa ctggccga
//
LOCUS       DTVW01000660            1227 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1799535, whole
            genome shotgun sequence.
ACCESSION   DTVW01000660 DTVW01000000
VERSION     DTVW01000660.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1227)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1227)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1227
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1799535"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            113..>1227
                     /locus_tag="EYO87_08705"
     CDS             113..>1227
                     /locus_tag="EYO87_08705"
                     /inference="COORDINATES: protein motif:HMM:PF02113.13"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase S13"
                     /protein_id="HIC66063.1"
                     /translation="MTGCSSRRGLLAGIAALCLARTARAETPQAARPPARPLPDAAQL
                     IRASGLAGTTGYALVDPLQGRIMAEGGAAMPFSPASTMKAITALYALDRLGQTHRFRT
                     RVLRADDMLILAGGGDPVLSSDDLDRLAADLVAAGAATPARFAVWGGALPQIEEIAPP
                     QADWLAYNPALSGMILNFNRVYLNWRRADGRMQMSLKARAERHSPRAYTITVAPGDQP
                     DLFSYRSEDGIEAWTVSRAAIAQPGSRWLPVRKPELYAGDVFQTLCRARGLVLPRPDT
                     IRMLPVAEEVAALDSPPLITILRDMLYYSTNLTAEVVGLQASGAPDTASSARAMQDWL
                     ATKGQGAGFQLRDHSGLSDDSRVTARGMALMLAGPGLA"
BASE COUNT          167 a          417 c          433 g          210 t
ORIGIN      
        1 cggccggcct ggccgatcgc agaccgcccg cctgggtgct ggtcaatctg ccgatgtcgg
       61 cccattcctc gaccgcgctt cgcctcgtgc ggccggacct gagggatccg ccgtgacggg
      121 ctgttccagc cgccgcggcc tgttggccgg aatcgccgcc ctctgccttg cccggaccgc
      181 gcgggcagag acgccgcagg ccgcgcgtcc gccggcaagg ccgctgccgg atgcggcgca
      241 gctgatccgg gcatccggtc tggcgggcac gacaggctat gccctggtcg atccgttgca
      301 gggtcggata atggcggaag ggggcgccgc gatgccgttt tcgcccgcca gcacgatgaa
      361 ggcgatcacc gcactttacg cgctggatcg gctggggcag acccaccgtt tccggacgcg
      421 tgtgctgcgg gcggacgata tgctgatcct tgcaggcggc ggcgatccgg tcctgtcgtc
      481 ggatgacctt gatcggctgg ccgccgatct ggttgccgcc ggtgcggcca ctccggcgcg
      541 ctttgccgtc tggggcggtg cattgccgca aatcgaggaa atagcgcccc cgcaggccga
      601 ttggctggcc tataacccgg ccttgtcggg gatgatcctc aatttcaacc gggtgtatct
      661 gaactggcgt cgcgccgatg gacggatgca gatgtcgctg aaggcgcggg cagagcggca
      721 ttcgccccgc gcctacacga tcactgtcgc gcccggcgat cagcccgatc tgttctctta
      781 tcgcagcgag gacgggatcg aggcctggac cgtctcgcgc gccgccatcg cccagccggg
      841 cagccgctgg ctgccggtgc gcaagccaga gctttacgcg ggcgacgtgt tccagacgtt
      901 gtgccgcgcg cgcggcctgg tgctgccccg gcccgacacg atccggatgc tgcccgtggc
      961 cgaagaggtc gcagccttgg acagcccgcc attgatcacg atcctgcgcg acatgttgta
     1021 ttattcgacc aacctgaccg ccgaagtcgt cgggttgcag gccagcggtg cccccgatac
     1081 cgccagttcg gcccgtgcca tgcaggattg gctggcgacg aaggggcagg gcgcggggtt
     1141 ccagcttcgc gaccattccg gcctgtcgga cgacagtcgc gtgacggcga ggggcatggc
     1201 cctgatgctg gccggtccgg ggctcgc
//
LOCUS       DTVW01000661            1409 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1800549, whole
            genome shotgun sequence.
ACCESSION   DTVW01000661 DTVW01000000
VERSION     DTVW01000661.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1409)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1409)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1409
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1800549"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..445
                     /locus_tag="EYO87_08710"
     CDS             <1..445
                     /locus_tag="EYO87_08710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008031348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HIC66064.1"
                     /translation="GAAMDPIADKAMVVIAIIVITGYSGMNPWLILPATVILFREVLV
                     SGLREFLGAQAKLLKVTKLAKWKTTFQMVAIAVLFLGTGLAFVEHGEPPLVGEGRLPW
                     SDSWSDLANQVGLVLIWIAAVLTGWTGWDYFVKALPYLKDPAHDA"
     gene            435..686
                     /gene="moaD"
                     /locus_tag="EYO87_08715"
     CDS             435..686
                     /gene="moaD"
                     /locus_tag="EYO87_08715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010397163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin converting factor subunit 1"
                     /protein_id="HIC66065.1"
                     /translation="MMLDVLYFAWLRERIGQPRERIETRAATLRDLVAELADRDEWHA
                     SAFADMGAVRCAIDQELADLDAPLDDAREVAFFPPMTGG"
     gene            690..1124
                     /locus_tag="EYO87_08720"
     CDS             690..1124
                     /locus_tag="EYO87_08720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008557718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor biosynthesis protein MoaE"
                     /protein_id="HIC66066.1"
                     /translation="MSARVQAGPFDLAAEMENFGRGAGAVVTFTGIVRDDTGRMLALE
                     LEYYPGMTERALAEYGARAAARFGLADWKIIHRHGRLNLGEPIMMVATAARHRRAAFE
                     AADYLMDWLKSRAPFWKREIGPDGAGAWVAAKDSDEDALKRW"
     gene            1162..1380
                     /locus_tag="EYO87_08725"
     CDS             1162..1380
                     /locus_tag="EYO87_08725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66067.1"
                     /translation="MIAVAQSQIAQALDALADRAEGPIFLPANLLERGIGGDHPRALH
                     LWRNAGWTAFLGGGSGGGAARVLNSTIA"
BASE COUNT          217 a          456 c          470 g          266 t
ORIGIN      
        1 cggcgcggcc atggatccga ttgccgacaa ggcgatggtg gtcatcgcca tcatcgtcat
       61 caccggttat tccggcatga atccctggct gatcctgccc gccacggtga tcctgttccg
      121 cgaggtcctg gtgtcgggcc tgcgcgaatt cctgggcgcg caggcgaagc tgctgaaggt
      181 taccaagctg gccaagtgga agacgacctt ccagatggtc gccatcgcgg tcctgttcct
      241 gggcacgggg cttgcctttg tcgaacacgg cgagccgccg ctggtgggcg agggcaggct
      301 gccctggtcc gacagctggt ccgatcttgc caatcaggtc gggctggtgc tgatctggat
      361 cgcggcggtg ctgaccggtt ggacaggttg ggattatttc gtcaaggcgc tgccctatct
      421 gaaggatccc gcgcatgatg cttgatgtcc tttatttcgc atggctgcgc gaacggatcg
      481 gccagcctcg cgagcgaatc gagacccggg ccgcgaccct gcgcgatctg gtcgccgaac
      541 tggccgaccg cgacgaatgg cacgcgtcgg cctttgccga catgggcgcc gtgcgttgcg
      601 cgatcgatca ggaactggcc gatcttgatg cgccgctgga cgatgcccgc gaggtggcct
      661 ttttcccgcc catgaccggg ggctgacccg tgtcggcgcg tgtccaggcc ggtcccttcg
      721 atcttgccgc cgagatggag aatttcggtc gcggcgccgg cgccgtcgtc acctttaccg
      781 gcatcgtgcg cgacgatacc ggccggatgc tggcgttgga gctggaatat tatcccggca
      841 tgaccgagcg tgcgctggcc gaatacggcg ccagggccgc cgcccgcttc ggccttgccg
      901 actggaagat catccaccgc catggacgcc tgaacctggg cgagccgatc atgatggtcg
      961 ccaccgccgc ccgccaccgt cgtgccgcct tcgaggccgc ggattatctg atggactggc
     1021 tgaaatcccg cgcccccttc tggaagcgcg agatcggccc ggacggcgcc ggcgcatggg
     1081 tcgcggcgaa agacagcgac gaggatgcgc tgaagcggtg gtgaccttcg gcctgccgat
     1141 atccagccgc ttcgtccgcc cgtgatcgcg gtcgcgcaat cgcagatcgc gcaggcgctg
     1201 gatgcgctgg ccgaccgcgc ggaaggtccg atcttcctgc ctgccaacct gctggagcgc
     1261 ggcatcggtg gcgatcatcc gcgcgccctg catctgtggc gcaatgccgg ctggaccgcc
     1321 ttcctcggcg gcgggtccgg aggaggcgcc gcccgcgtcc tcaatagcac cattgcttga
     1381 tatacgttaa tagtaaaata caacatata
//
LOCUS       DTVW01000662            1531 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1801375, whole
            genome shotgun sequence.
ACCESSION   DTVW01000662 DTVW01000000
VERSION     DTVW01000662.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1531)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1531)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1531
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1801375"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..431)
                     /locus_tag="EYO87_08730"
     CDS             complement(<1..431)
                     /locus_tag="EYO87_08730"
                     /inference="COORDINATES: protein motif:HMM:PF07331.9"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter TctB
                     family protein"
                     /protein_id="HIC66068.1"
                     /translation="MRRDWHDLWGGAAMTAIGAFVALYSVAQYDIGSLRRMGPGFFPV
                     VLGALLAGLGLMIALPAWHRAGEMRPFDVPQALAVLAAIGLFGLGLQGLGLALATAGA
                     VLIASLPAPRRGWRWRLILAAIITVLTWLVFKQGLQMTMPV"
     gene            complement(439..1413)
                     /locus_tag="EYO87_08735"
     CDS             complement(439..1413)
                     /locus_tag="EYO87_08735"
                     /inference="COORDINATES: protein motif:HMM:PF03401.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HIC66069.1"
                     /translation="MKQFNRRALLALGAVMIGTGMAAAQDAWPTEPLRVYVGFPAGSS
                     PDVLARLITEPLSRKLGQPVVVENKPGAGGVIGVQQMLAGKTDYAFGTTINGPLTTSP
                     RLVENVGYDVGKDIAPVALIATSPLVLAMAAEAAPTDIASFIEAARAEPGAIAYGSVG
                     QGSGAHLTAELFADAAGIEMLHIPFTSYAEVTTSIIGGEIDAGFMAPSAALPQVQADK
                     MKMLGITSSEPFAQVPDVPVIAGQAGIPDDFRAELWNAFIAPAGTDPAILERLNTEVN
                     AILDDPEVQKKMLAMGWQAQGGTADDLARRIADDTSVWGNVIDRIEAQ"
BASE COUNT          263 a          535 c          496 g          237 t
ORIGIN      
        1 cagaccggca tggtcatctg caagccctgc ttgaagacca gccatgtcag aacggtgatg
       61 atcgccgcaa ggatcagccg ccaccgccag ccgcggcgcg gcgcgggcag gctggcgatc
      121 agcaccgcgc ccgcggtcgc aagcgccagc cccagcccct gcaggcccag accgaacagg
      181 ccgatggcag ccagcaccgc aagcgcctgg ggcacatcga agggccgcat ctcgccggcg
      241 cgatgccagg cgggcagcgc gatcatcagg ccaaggcccg ccagcagcgc gcccagcacg
      301 accggaaaga agcccggtcc catccgccgc aggctgccga tatcatattg ggccaccgaa
      361 tacagcgcga cgaaggcgcc gatggcggtc atcgccgcgc cgccccagag atcgtgccag
      421 tcgcgtcgca tcagcggctt actgcgcctc gatccggtcg atcacattgc cccagacgct
      481 ggtgtcatcc gcgatcctcc gggccagatc atcggccgtt ccaccctgcg cctgccagcc
      541 catcgccagc atcttcttct gcacctcggg atcgtcgagg atcgcgttca cctcggtgtt
      601 cagcctttcg agaatggccg gatcggtgcc cgcgggcgcg atgaaggcgt tccacaattc
      661 ggcccggaaa tcgtccggaa tgccggcctg tccggcgatg accggcacgt cgggcacctg
      721 cgcgaagggt tcggacgagg tgatgcccag catcttcatc ttgtccgcct gaacctgcgg
      781 cagggctgcc gagggcgcca tgaagcccgc gtcgatctcg cctccgatga tcgaggtggt
      841 gacttcggca tagctggtaa agggaatgtg cagcatctcg atcccggcgg cgtcggcaaa
      901 cagttccgcc gtcagatgcg cgcccgatcc ctgcccgacc gaaccatagg cgatcgcgcc
      961 gggttcggcc ctcgcggcct cgatgaagct ggcgatgtct gtgggcgcgg cctctgcggc
     1021 catggccaga accagcggcg aggtcgctat cagcgcaacc ggggcgatgt ccttgccgac
     1081 gtcgtagccg acattctcga ccagccgggg cgaggtcgtc agcggaccgt tgatggtggt
     1141 gccgaaggca taatccgtct tgcccgccag catctgctgc acgccgatga cgccgcctgc
     1201 gccgggcttg ttctcgacca ccacgggctg gcccagcttc cgggacagcg gttcggtgat
     1261 cagtcgcgcc agcacatcgg gcgacgatcc cgccggaaag cccacgtaga cgcgcagcgg
     1321 ttcggtcggc catgcgtcct gggccgcggc catgccggtg ccgatcatca cggccccaag
     1381 tgccagcagc gccctgcgat tgaactgctt catcctcttt cctcccggta aaacgcgaag
     1441 gaggtgatgc gacgggcttg gccgaaggtc aagcgtcagg ctcagccgat gcggctgaac
     1501 gagacggtct gcgtgaccag ttcggccgga c
//
LOCUS       DTVW01000663            3364 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1804661, whole
            genome shotgun sequence.
ACCESSION   DTVW01000663 DTVW01000000
VERSION     DTVW01000663.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3364)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3364)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3364
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1804661"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            146..1312
                     /locus_tag="EYO87_08740"
     CDS             146..1312
                     /locus_tag="EYO87_08740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013066454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HIC66070.1"
                     /translation="MPVKNRFAELLPEITAWRRDFHENPELLYDVHRTAGKVADLLRD
                     FGCDEVTEGIGRTGVVGVIKGKSDKTGRVIGLRADMDALPINEQTGLDYASKTPGKMH
                     ACGHDGHTAMLLGAAKYLAETRNFDGTAVVIFQPAEEGGGGGDAMVRDGLIDRWKIDE
                     VYGMHNMPGIPTGAFAIKPGAMMASADQFDITVTGKGGHAAKPHECIDTTLTAAQIIV
                     ALQSVVARNIDPLKNAVISVCVVTTDSTAHNVIPQVVKLRGTARSLDPGVRDQLQEGI
                     GRVAINVAAAMGATAEVDYQRGYPVTVNDDQATTWAAKVARDIAGDVDMEMQPMMGGE
                     DFSYMLLERPGAYIFVGNGDSAMVHHPAYNFDDNAIPAGSSWYAGMVESRMPAA"
     gene            1454..2338
                     /gene="purU"
                     /locus_tag="EYO87_08745"
     CDS             1454..2338
                     /gene="purU"
                     /locus_tag="EYO87_08745"
                     /EC_number="3.5.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_354027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formyltetrahydrofolate deformylase"
                     /protein_id="HIC66071.1"
                     /translation="MNSYTLRVTCASTRGIVAAISGFLAQHDCNITDSAQFDDAETGN
                     FFMRMSFRSEGGATLDGLQADFAPIAGKFGMEIEISDDAVKKKVLIMVSRFGHCLNDL
                     LYRWRIGALPIDIVGVVSNHHEYQKVVVNHDIPFHMIRVTAQNKPEAEARQLEIIEET
                     GAELIVLARYMQVLSDAMCHKMSGRIINIHHSFLPSFKGANPYKQAYERGVKLIGATS
                     HYVTADLDEGPIIEQDTVRVTHAQSPGDYVSLGRDVESQVLSRAVHAHIHGRVFVNGA
                     KTVVFPASPGSYVSERMG"
     gene            complement(2636..>3364)
                     /locus_tag="EYO87_08750"
     CDS             complement(2636..>3364)
                     /locus_tag="EYO87_08750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018000430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BMP family ABC transporter substrate-binding
                     protein"
                     /protein_id="HIC66072.1"
                     /translation="ATGYKRAENVATYDARFYEGRAVIGTIAGRMTRSNKIGYIGSFP
                     IPEVVQGINSSYIHARKVNPDVEIKVVWAYSWFDPAKEADAAAALIAEGVDVILQHTD
                     STAPLAKAQEAGAIGFGQASDMANFKPTPRVSSIIDNWAPYYIERVGAMLDGTWESTA
                     TWAGIGDGEVEIGEITDAVPAEVKQEALALKDKIASGEYHPFTGPLNKADGSAWLADG
                     ETATDEELSGMDFFVEGITAELPQ"
BASE COUNT          623 a         1050 c         1071 g          620 t
ORIGIN      
        1 cgcttctcgg acggatcgcc cgtcacgctg gggcccgatc tctaggtcac agccgctcgc
       61 gctctttccg gatatctccg gcgtgcggcg cccacttgca ggccgtgcag gaaagtctca
      121 tcctgcgccg cgaaggagat ccatcatgcc cgtcaagaac cgatttgccg aattgctgcc
      181 cgaaatcacc gcctggcgcc gcgatttcca cgagaatccg gaattgctgt atgacgttca
      241 ccgcacggcg ggaaaagtcg cggatctttt gcgggatttc ggctgtgacg aggtgacgga
      301 agggatcggc cggaccggtg ttgtcggggt catcaagggc aagtcggaca agaccggccg
      361 ggtgatcggt ctgcgtgccg atatggacgc gcttccgatc aacgaacaga ccgggctgga
      421 ttatgcctcg aagacgcctg gcaagatgca tgcctgcggc catgacggcc atacggcgat
      481 gctgctgggc gcggcgaaat accttgccga gacgcgcaat ttcgacggca cggcggtggt
      541 catcttccag cccgccgaag aaggcggcgg cggcggcgac gcgatggtca gggacgggct
      601 gatcgatcgc tggaagatcg acgaggttta cgggatgcac aacatgccgg gcatccccac
      661 cggcgccttc gccatcaagc ccggtgcgat gatggcctct gccgaccagt tcgacatcac
      721 cgtgactggc aagggtggcc acgcggcaaa gccgcatgaa tgcatcgaca cgaccctgac
      781 ggcggcgcag atcatcgtcg cgctgcaatc cgtcgtcgcc cgcaatatcg atccgctgaa
      841 gaacgcggtg atctcggtct gcgtggtcac gaccgattcg accgcgcata acgtgattcc
      901 gcaggtggtc aagctgcggg gcaccgcgcg cagtctcgat cccggcgtcc gcgaccagtt
      961 gcaagagggc attggccgcg ttgccatcaa tgtggcagcc gcgatgggtg cgacggccga
     1021 ggtcgattat cagcgggggt atccggtcac cgtgaacgac gatcaggcaa cgacctgggc
     1081 cgccaaggtg gcccgcgaca tcgccggcga tgtggacatg gagatgcagc cgatgatggg
     1141 tggcgaggat ttcagctaca tgctgctgga acgccccggc gcctatatct tcgtcggcaa
     1201 tggcgattcc gcgatggtcc accatccggc ctataatttc gacgacaacg ccatcccggc
     1261 cggatccagc tggtatgccg gcatggtcga aagccggatg cccgccgcct gaatcgtcgc
     1321 gcgcggcagg ccatgtcgca gcaccgccgg ccgaggtcgg aaacacgatg gtcatggcac
     1381 gccgttcggt cgaaatgcgg gggcgggcgg cgaagatcga cccgccctga caagttgaag
     1441 ggacggatcc gacatgaaca gctataccct gcgcgtcacc tgcgcctcga cccgcgggat
     1501 cgtcgccgcg atctcgggct ttctggcgca gcatgattgc aacatcaccg acagcgcgca
     1561 gttcgacgat gccgagaccg gcaatttctt catgcggatg agctttcggt ccgaaggtgg
     1621 ggcgacgctg gacggacttc aggccgattt cgcgccgatt gcggggaaat tcggcatgga
     1681 gatcgagatc agcgacgatg cggtcaagaa gaaggtgctg atcatggtca gccgcttcgg
     1741 ccattgcctg aacgaccttc tctatcgctg gcggatcggc gcgctgccca tcgacatcgt
     1801 cggtgtggtt tcgaaccacc acgaatatca gaaggtcgtc gtcaatcacg acatcccttt
     1861 ccacatgatc cgcgtgaccg cccagaacaa gcccgaggcc gaggcccggc agttggagat
     1921 aatcgaggaa accggggccg aactgatcgt cctggcgcgc tacatgcagg tcctgtcgga
     1981 tgcgatgtgc cacaagatgt cggggcggat catcaacatc caccattcct tcctgcccag
     2041 tttcaagggg gcgaatccct acaagcaggc ttatgagcgc ggcgtgaagc tgatcggggc
     2101 gacctcgcac tacgtcaccg cagatctgga cgagggcccg atcatcgaac aggacacggt
     2161 gcgcgtcacc catgcccaga gcccgggcga ttatgtcagt ctcggtcgcg atgtggaaag
     2221 ccaggtcctg tcgcgcgcgg tccatgccca catccacggc cgcgtgttcg tgaatggcgc
     2281 gaaaacggtc gtcttccccg cctcgccagg cagctatgtc tcggagcgga tgggctgagc
     2341 aatcaacacg gccatggtgc aggtccgaac cggcggcggg gggcttcgcg ccccccggcc
     2401 gcgcgtcccg cgcggctccc cccgcgggat atttggacca aggcaaggca ggttgacgat
     2461 ttttttacag attccaggtt attcaccgaa tgcggtacag gcggggacgc cgatgaccgt
     2521 ccaaggcaaa gcgccccgtt tcctgatgga agcggggcgt catcgacttt gccttggcag
     2581 aaatatcccg ggggagcccc ggaggggcgg gggcagcgcc cctttttccc gccggctatt
     2641 gcggaagctc ggcggttatt ccttcgacaa agaaatccat acccgacaat tcctcgtccg
     2701 tcgccgtctc gccgtcggcc agccatgcac tgccatcggc cttgttcagc ggaccggtga
     2761 agggatggta ttcgcccgag gcgatcttgt ccttcagcgc cagcgcctcc tgcttgacct
     2821 cggccggcac ggcatcggtg atttcgccga tctcgacctc gccatcgccg attcccgccc
     2881 aggtcgccgt tgattcccag gtcccgtcca gcatcgcgcc gacccgttcg atgtagtagg
     2941 gcgcccagtt gtcgatgatc gacgagaccc tgggagtcgg cttgaaattc gccatgtcgc
     3001 tggcctgtcc gaagccgatc gcccccgctt cctgcgcctt ggccagaggt gcggtggaat
     3061 cggtatgctg caggatcacg tccacgcctt cggcgatcag ggctgctgcg gcgtcggctt
     3121 ctttggcggg atcgaaccag ctataggccc agaccacctt gatttcgaca tccggattga
     3181 cctttctggc gtggatatag gacgagttga tgccctggac cacctcgggg atcgggaagg
     3241 aaccgatata gccgatcttg ttcgacctgg tcatccgccc cgcgattgta ccgatcacgg
     3301 cgcggccctc gtagaaacgg gcgtcatagg tagcgacatt ctcggcgcgc ttgtagccgg
     3361 tcgc
//
LOCUS       DTVW01000664            2347 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1804787, whole
            genome shotgun sequence.
ACCESSION   DTVW01000664 DTVW01000000
VERSION     DTVW01000664.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2347)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2347)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2347
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1804787"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..342
                     /locus_tag="EYO87_08755"
     CDS             <1..342
                     /locus_tag="EYO87_08755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011632223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ImmA/IrrE family metallo-endopeptidase"
                     /protein_id="HIC66073.1"
                     /translation="NRADNYFRQRFTMAHELAHFLLHRDRIGAGLDDDRAYRSTEVGA
                     YYNTEISSREEAEANRLAATILMPAALVRRECEYSASVDALAKRFQVSRQAMDIRLST
                     LGIQLPTESAA"
     gene            complement(473..1000)
                     /locus_tag="EYO87_08760"
     CDS             complement(473..1000)
                     /locus_tag="EYO87_08760"
                     /inference="COORDINATES: protein motif:HMM:PF14384.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66074.1"
                     /translation="MAERITKAEEVRRANRHYMADAMRMLEWDLHSAILREMRIPEEW
                     HEIAQKKPGQRKTRVTLRLDQDLVTFFRSMGPDWQVRVNHLMSVWMHARLAGLIQGGE
                     TMDYLARREDRMLDGRRPEFGDIQHDEDDLCGVAPVPANWARIEAVPMPEQRIKSKIG
                     RKALFEERKARNGIG"
     gene            complement(1227..>2347)
                     /locus_tag="EYO87_08765"
     CDS             complement(1227..>2347)
                     /locus_tag="EYO87_08765"
                     /inference="COORDINATES: protein motif:HMM:PF00353.17"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="calcium-binding protein"
                     /protein_id="HIC66075.1"
                     /translation="QFENLVTGAGDDRITGTADANRIYTYDGNDTVDGGTGNDYIHGG
                     NGNDSLVGGGGRDTIYGGAGNDVIRSSGQGVYDGQGGNDIVYAGLGTPETLRGGAGTD
                     MLDTTSFSGDYRVDLASGATNYAGESFIQFENLRAGSGDDTLLGTNDRNVMQGGNGDD
                     RLSGRDGNDSLYGQNGDDYLGGGSGNDYMRGGNDNDRMSGHGGNDRMYGDAGNDWMAG
                     QDGDDLLNGGLGDDTLSGGAGDDVLIGSTGRDVMTGGSGEDVFRFYSTSDSPFGVSTT
                     YDRITDFQGAGINFTFATEDKIDLSSIDANVNLAGNQAFVFTGTTSGGAGTIWMQDVG
                     GETWLRVNTDSDSTPEMTVRIVDGTDTASDYWAGDFVL"
BASE COUNT          387 a          805 c          672 g          483 t
ORIGIN      
        1 aatcgtgctg acaattattt caggcagcgc ttcactatgg cgcacgaact ggctcatttt
       61 ctcttacata gggacaggat aggggccggt cttgatgatg atcgggcata tcggtctaca
      121 gaggtgggag cgtattataa taccgagatc agttcccgcg aggaagccga agccaataga
      181 cttgctgcga caatcctgat gcctgctgcg cttgttcgta gggagtgcga gtattcagcg
      241 tcagttgatg cacttgccaa gcgctttcag gtgtcgcgcc aagcaatgga cattaggctg
      301 tcaactttgg ggatccagct ccccacagag agtgcagcat agatagctta ggggggctcg
      361 cgcgcaccat ctcggccaaa ggtgcgtgta aacacgcacc ctaccgacgt cgtagagtgg
      421 ggttccgccc caccaaaccc tgccaaaggt gggataaacc cctcccctca cctcacccta
      481 tcccgttccg cgccttcctc tcctcgaaca acgccttccg ccctatcttc gacttgatcc
      541 gctgctcggg catcggcacc gcctcgatcc gggcccagtt ggcggggacc ggggccacgc
      601 cgcacagatc gtcctcgtca tgctggatgt cgccgaattc ggggcgccgg ccgtccagca
      661 tccgatcctc gcgccgcgcc aggtaatcca tcgtctcgcc gccctggatc aggccggcca
      721 gccgcgcatg catccagacc gacatcaggt ggttcacccg cacctgccag tccggtccca
      781 tgctgcggaa gaaggtcacc agatcctggt ccagccgcag cgtcacccgc gtcttgcgct
      841 ggccgggttt cttctgcgcg atctcgtgcc attcttcggg gatccgcatc tcgcgcagga
      901 tcgcgctgtg caggtcccat tccagcatcc gcatcgcgtc tgccatgtag tggcggttcg
      961 cccgcctgac ctcttccgcc ttcgtgatcc tctctgccat gcgcccatct cgccctgtcg
     1021 ccgatgggcc agattggcgc gggcgatctt aaccatccct taaccggccg cgcgttgtcg
     1081 gtgtacgacc ggtgaccatc ctgtgcgcgg tcggtgcatg tcgtgtgcaa gcgccgtgac
     1141 gccctgttcg gcggcccaca gcgcggcccc ggacagccga aaggcgcggc cgtttccggc
     1201 cgcgcccgcg tcatctcaac ccgcgatcac aggacgaaat cgcccgccca gtaatcgctg
     1261 gccgtatcgg tcccatcgac gatcctgacc gtcatctcgg gcgttgaatc gctgtcggta
     1321 ttgacccgca gccaggtctc tccgcctacg tcctgcatcc agatcgtgcc cgcgccgcca
     1381 ctggttgtgc cagtgaaaac aaaggcctgg ttcccggcaa ggttgacgtt ggcatcaatc
     1441 gaggacagat cgatcttgtc ttccgtggcg aaggtgaaat tgatccccgc gccctggaaa
     1501 tccgtgatcc ggtcgtaggt ggtgctgaca ccgaagggcg aatccgaggt gctgtagaag
     1561 cggaacacat cctcgccgct gccccccgtc atcacgtcgc gcccggtgct gccgatcagc
     1621 acgtcgtccc cggcgccgcc cgacagcgtg tcatcgccca acccgccatt cagcaaatcg
     1681 tccccatcct gacccgccat ccagtcattg ccggcatcgc catacatgcg gtcatttccg
     1741 ccatgcccgc tcatccggtc gttgtcgttg ccgccgcgca tgtagtcgtt gccgctgccg
     1801 ccgcccagat aatcgtcgcc gttctgccca tagagcgagt cgttgccgtc acggcccgag
     1861 agccgatcat cgccgttccc gccctgcatg acgtttcgat cattggtccc cagcagcgtg
     1921 tcgtcgccac tgcccgcgcg cagattctcg aactggatga agctttcgcc ggcatagttg
     1981 gtcgcacccg aggccaggtc gacgcggtag tcgccgctga aactggtcgt gtccagcata
     2041 tcggttcctg cgccgccgcg cagcgtctcg ggcgtgccca gtccggcata gacgatatcg
     2101 ttgccgccct ggccgtcata gacgccttgg ccgctggaac ggatgacatc atttccggcg
     2161 ccgccataga tcgtgtcgcg accgccaccg ccgaccaggc tgtcattgcc gttgccgccg
     2221 tggatataat cgtttccggt gccgccatcg acggtatcgt ttccgtcata ggtgtagatg
     2281 cggttggcgt ccgccgtgcc ggtgatccgg tcatcgcctg cgccggtgac gaggttctcg
     2341 aactggg
//
LOCUS       DTVW01000665            1837 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1807023, whole
            genome shotgun sequence.
ACCESSION   DTVW01000665 DTVW01000000
VERSION     DTVW01000665.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1837)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1837)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1837
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1807023"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..597
                     /locus_tag="EYO87_08770"
     CDS             <1..597
                     /locus_tag="EYO87_08770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010398364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66076.1"
                     /translation="LCRPQLLIADEPTTALDVTVQAQIMTLLADLQREFGMAMVLITH
                     DLGVVAGSCERVAVMYGGRIRETGPVGPLFHDPAHPYTQGLLAAIPRIDQQGDTLSVI
                     PGAPPNMTHPPAGCAFEPRCPYRRADCASLRPPLEDFAPARARACFAPLADVRAHRHN
                     ARLDDLETGTRAPSRDEPVPRAALAGAGMAGTPSKVDE"
     gene            594..1622
                     /locus_tag="EYO87_08775"
     CDS             594..1622
                     /locus_tag="EYO87_08775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011747647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HIC66077.1"
                     /translation="MMTRPLLDVHDLRVTFRIRREGAMPWAAPLPLNAVSGVDFTLDP
                     GETLGVVGESGCGKSTLARALIGLVPAAGRAEWIDGRDLIGLSPHQMMTYRSDIQMVF
                     QDPLASLNPRMTVGQIIAEPLKTHRPGLKSAEVKERVKAMMEKVGLLPNQINRYPHEF
                     SGGQCQRIGIARALIVEPKLIICDEPVSALDVSIQAQVINLLIRLQRELGLALIFIAH
                     DLSVVKHISDRVMVLYLGKVMEIGTTDDLFADPQHPYTQALLSAVPVPDPDYDPAATV
                     VPLAGDLPSPMSPPSGCVFRTRCPRAQPVCARQVPALLGDAHQTACHFPGPLSDEEIA
                     RARAVRAA"
     gene            1624..>1837
                     /locus_tag="EYO87_08780"
     CDS             1624..>1837
                     /locus_tag="EYO87_08780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIC66078.1"
                     /translation="MAAPAEAPGFAARWAALKNLPPFMAMVWRASPGLTLAMILLRLV
                     RAVLPVSMLWIGKLIIDEVVRLGALQT"
BASE COUNT          276 a          632 c          625 g          304 t
ORIGIN      
        1 ctgtgccggc cgcaactgct gatcgcggac gaaccgacga cggcgctgga cgtgaccgtg
       61 caggcgcaga tcatgaccct gctggccgat ctgcaacgcg aattcggcat ggcgatggtc
      121 ctgatcaccc atgatctggg cgtcgtcgcc ggttcatgcg aacgtgtcgc ggtcatgtat
      181 ggtggccgga tccgcgaaac cggaccggtg gggccgctgt ttcacgaccc cgcccatccc
      241 tatacgcagg ggctgctggc ggcgatcccg aggatcgacc agcagggcga cacgctgtcg
      301 gtcattcccg gcgcgccgcc caacatgacg catccgcccg ccggttgcgc cttcgagccg
      361 cgctgcccct atcggcgcgc ggactgcgcc agcctgcgcc caccgctgga agatttcgcg
      421 ccggcccgcg caagggcctg tttcgcgccg ctggccgatg ttcgggcgca tcgccacaac
      481 gcccggctgg acgatctgga aaccggcacg cgcgcgccct ctcgcgacga accggtgccg
      541 agggccgcgc tggcgggcgc gggcatggcc ggaaccccca gcaaggtgga tgaatgatga
      601 cccgacccct gctcgatgtg cacgacctgc gcgtgacctt ccggatccgg cgcgagggtg
      661 cgatgccctg ggccgcgccc ctgccgctta atgccgtcag cggcgtcgat ttcacgctgg
      721 atcccggcga gaccctgggc gtcgtgggtg aatcgggttg tggcaaatcc accctggccc
      781 gcgcgctgat cggtctggtc ccggccgcgg gtcgggccga atggatcgac gggcgcgacc
      841 tgatcggcct gtcgccgcac cagatgatga cctatcgcag cgatatccag atggtgttcc
      901 aggatccgct ggccagcctg aacccgcgca tgaccgtggg ccagatcatc gccgagccgc
      961 tgaaaaccca tcgccccggc ctgaaatcgg ccgaggtgaa ggaacgggtc aaggcgatga
     1021 tggaaaaggt cgggctgctg cccaatcaga tcaaccgcta tccgcatgaa ttcagcggcg
     1081 ggcaatgcca gcggatcggc atcgcccgcg ccctgatcgt cgagccgaag ctgatcatct
     1141 gcgacgaacc ggtctcggcg ctggacgtct cgatccaggc gcaggtgatc aacctgctga
     1201 tccggttgca gcgcgaactg ggcctggcgc tgatcttcat tgcccatgac ctgtcggtgg
     1261 tgaagcatat cagcgaccgg gtgatggtgc tgtatctggg caaggtgatg gagatcggca
     1321 cgaccgacga tctgttcgcc gacccgcagc acccctacac gcaggcgctg ctgtcggcgg
     1381 tgccggttcc ggacccggat tacgaccccg ccgcgaccgt cgtgccgctg gcaggcgatt
     1441 tgccgtcacc gatgagcccg ccttccggct gcgtgttccg gacccgatgc ccgcgcgcgc
     1501 agccggtctg tgcccggcag gttcccgcgc ttttgggcga cgcccaccag accgcctgcc
     1561 atttccccgg tccgctgagc gacgaggaaa tcgcccgcgc tcgtgcggtc cgggcggcct
     1621 gacgtggccg cgcccgccga ggcgcccggt tttgccgcgc gttgggcggc gctgaagaac
     1681 ctgccgccct tcatggcgat ggtctggcgc gccagcccag gcctgacgct ggcgatgatc
     1741 ctgctgcggc tggtgcgggc ggtgctgccg gtctcgatgc tgtggatcgg caagctgatc
     1801 atcgacgagg tggtgcgcct gggcgcgctg caaaccc
//
LOCUS       DTVW01000666            2195 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1807200, whole
            genome shotgun sequence.
ACCESSION   DTVW01000666 DTVW01000000
VERSION     DTVW01000666.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2195)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2195)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2195
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1807200"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..843
                     /locus_tag="EYO87_08785"
     CDS             <1..843
                     /locus_tag="EYO87_08785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009807030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecQ"
                     /protein_id="HIC66079.1"
                     /translation="RLFDGTQAVRMALSAMLRTGEWFGAGHLIDILTGHTTEKVRERG
                     HDKLPTFGVGRDHSRGQWQAIFRQMMGLDLCRPDPERHGALFLTDAAHPVLRGEDSVT
                     LRHDTTLRARGANVLRTQVDEEDEPLLSALKARRRALAEAARVPAYVIFPDRTLIEMA
                     RLRPQDLDQMARVSGVGAKKLESYGTEFLSVIAGDQPDMHPHRRALAGRPEGILFDRL
                     VAAQNRLTRGEDGTEKPLSCSTAQLRRIAESRPADQAALSRHLDAARLNRFGPAFLRQ
                     IAES"
     gene            1131..2027
                     /gene="msrP"
                     /locus_tag="EYO87_08790"
     CDS             1131..2027
                     /gene="msrP"
                     /locus_tag="EYO87_08790"
                     /EC_number="1.8.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010392237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-methionine-sulfoxide reductase catalytic
                     subunit MsrP"
                     /protein_id="HIC66080.1"
                     /translation="MKLTWSDVTPKAHWLDRRAFIATAAALSASPALALSGKPSGLST
                     DEKPNTLEEITNYNNYYEFGTGKEDPARNAGGLKTDPWSVEIGGLVDRPGSYGVEDLA
                     PENTLEERIYRLRCVEGWSMVIPWIGVPLASVLNRAGIQPSAKFVAFETVTQPDNMPG
                     LRYPILDWPYREGLRLDEAMHPLAILATGLYSDPLPNQNGAPIRLVVPWKYGFKSIKS
                     IVRITLSDSQPYATWNASQPNEYGFYANVNPNVDHPRWSQASERRIGAGLFAGREETL
                     MFNGYADQVASLYSGMDLKKNF"
     gene            2027..>2195
                     /locus_tag="EYO87_08795"
     CDS             2027..>2195
                     /locus_tag="EYO87_08795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfoxide reductase heme-binding subunit YedZ"
                     /protein_id="HIC66081.1"
                     /translation="MRRRINDALRRLPVWVVWLGGMIPLALLVSDTFFGGLGIDPVRD
                     IEYRLGRTALYF"
BASE COUNT          385 a          702 c          710 g          398 t
ORIGIN      
        1 cggctgttcg acggcacgca ggcggtgcgc atggcgctgt cggcgatgct gcgcaccggt
       61 gaatggttcg gcgcggggca cctgatcgac atcctgaccg gacacacgac cgaaaaggtt
      121 cgcgaacgcg gccacgacaa gctgccgacc ttcggtgtcg gtcgcgatca ttcgcgtggc
      181 cagtggcagg cgatcttccg gcagatgatg ggcctggatc tgtgccgccc cgatccggaa
      241 cgccacgggg ctctgttcct gaccgacgcc gcccatccgg ttctgcgcgg cgaggacagc
      301 gtaaccctgc gtcatgacac gaccctgcgg gccaggggcg ccaatgtcct gcgcacgcag
      361 gtcgacgaag aggatgagcc gcttctgtcg gcgctgaagg cccggcgccg cgcgctggcc
      421 gaggccgccc gcgtgcctgc ctatgtcatc ttccccgacc gcacgctgat cgagatggcc
      481 cgcctgcgtc ctcaggatct ggaccagatg gcgcgggtca gcggggtcgg ggcgaagaag
      541 ctggaaagct atggcaccga attcctgtcg gtgatcgcag gcgatcagcc ggacatgcat
      601 ccccaccgcc gggcgctggc gggccggccc gagggcatcc tgttcgaccg tctggtcgcg
      661 gcgcagaacc ggctgacgcg cggcgaggat ggaaccgaaa agccgctgtc ctgttcgacc
      721 gcgcaactgc gccgcatcgc cgaatctcgc cccgcggacc aggctgccct gtcgcgccat
      781 ctggatgccg cgcgcctgaa tcgcttcggt ccggccttcc tgcgacagat cgccgagagc
      841 tgaggccgcg ccacgcggcc catcaccgcg tgccgcccgt gttttgcctg acaggcggat
      901 tcccgtccgt tgcagggaaa catcggcgca tccgcgttga tcctgtccgg cttcttgtcc
      961 gcctgcgacg cctgcgatca cctgcttgtc atcgctcgtg ccgtaacggg cggtatcgcc
     1021 ggaacgaagg gtaatgggaa tgtgatgcgc attttcggcc cgccgcatcg taactatgtc
     1081 taggtcgggt gtgcaaggct gccaggcaca agacggatcg gaggaagaac atgaaactta
     1141 catggtcaga cgtgacaccg aaggcccact ggctggatcg gcgtgcattc atcgcgactg
     1201 ccgcggctct gtccgcctcg ccggcgctgg cgctaagcgg caagccgtcc gggttgtcga
     1261 ccgacgaaaa gcccaacacg ctggaagaaa ttacaaatta caacaattac tatgaattcg
     1321 gcaccggcaa ggaggatccc gcccgcaatg ccggcgggct gaaaaccgat ccctggtcgg
     1381 tcgagatcgg cggtctggtg gatcgccccg gctcttacgg tgtcgaggat cttgcgcccg
     1441 agaacacgct tgaggaacgc atctaccggc tgcgctgcgt cgagggctgg tcgatggtca
     1501 ttccctggat cggcgtgccg ctggcttcgg tgctgaacag ggccgggatc cagccctcgg
     1561 cgaaattcgt cgccttcgag acggtgacgc agcccgacaa catgcccggt ctgcgctatc
     1621 cgatccttga ctggccctat cgcgagggac tgcggctcga cgaggcgatg cacccgctgg
     1681 cgattctggc gaccggattg tattccgacc cgctgccgaa ccagaacggg gctccgatcc
     1741 ggctggtcgt gccatggaaa tacgggttca agtcgatcaa gtcgatcgtc aggatcaccc
     1801 tgtccgacag ccagccctat gccacctgga atgcaagtca gcccaacgaa tacgggtttt
     1861 acgccaatgt gaacccgaat gtcgaccatc cccgctggtc gcaggcatcc gagcggcgca
     1921 tcggtgccgg actgttcgcc ggacgtgagg aaacgctgat gttcaacggc tatgccgatc
     1981 aggttgcatc gctgtattcc ggcatggatc tcaagaagaa cttctgatgc gcagaagaat
     2041 caatgatgca ctgcgccgac tgccggtctg ggtcgtgtgg ctggggggca tgatcccgct
     2101 tgctttgctg gtgtcggata cgttcttcgg cggactgggc atcgacccgg ttcgcgacat
     2161 cgaatatcgc ctgggccgga ccgcgctcta tttcc
//
LOCUS       DTVW01000667            2104 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1807700, whole
            genome shotgun sequence.
ACCESSION   DTVW01000667 DTVW01000000
VERSION     DTVW01000667.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2104)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2104)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2104
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1807700"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..318)
                     /locus_tag="EYO87_08800"
     CDS             complement(<1..318)
                     /locus_tag="EYO87_08800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018000425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HIC66082.1"
                     /translation="MSADPKEPLRILAPNPSPLTGPGTNSFLIGRDHVAVIDPGPDDP
                     GHLHAILDAAPGPITHILVTHAHRDHSAGALALSRRTQAPVLAFGAAESGRSAVMRRL
                     AAAG"
     gene            356..1708
                     /locus_tag="EYO87_08805"
     CDS             356..1708
                     /locus_tag="EYO87_08805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007119730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing protein"
                     /protein_id="HIC66083.1"
                     /translation="MNHTETSWLKGLFPRGLYGRAALILILPVVVITLVVSVMILQRH
                     FEGVTRQMTASMARELDFVLRRMDRAENLATAKLAGQSIAAPLGLRLQLPAPARQGDS
                     RVFYDFSGRVLIRELRNNVPGITAIDLVGDDSVVAVTLTGRYGPFSVTFDRTRVTATN
                     PHQLFVLMIFTSLLMSGIAVVFLRNQLRPIRRLARAAEEYGKGRVVAYRTAGATEVRS
                     AGTAFLDMRNRLERQNEQRKMMMSGISHDLRTPLTRMQLGLSMISTDIPPDADDIAAM
                     QADLAEMNRMIDAFLDYARDDARESPAEAINVADFLGAIASDGQRAGHDVLLLGVSGD
                     PQGQATFRRDMLRRALENLIGNAVRYGSRAEIDATLGPRSLRIGVEDDGPGIPDDSLE
                     AAMRPFTRLDPSRNRNSGQGAGLGLAIAADVARGHGGQLRLGRGARLGGLRAEIVIPR
                     "
     gene            1940..>2104
                     /locus_tag="EYO87_08810"
     CDS             1940..>2104
                     /locus_tag="EYO87_08810"
                     /inference="COORDINATES: protein motif:HMM:PF02190.14"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66084.1"
                     /translation="MQGPCVAMTGPRLRAGKERKAMNEFASQTYPVLPLRDIVVFPHM
                     IVPLFVGREKS"
BASE COUNT          339 a          676 c          738 g          351 t
ORIGIN      
        1 ccccgccgcc gcgagccggc gcatcaccgc cgagcggccc gattcggcgg caccaaaggc
       61 cagcaccggc gcctgcgtcc ggcgcgacag cgccagggcg cccgcggaat ggtcgcgatg
      121 ggcatgggtc accaggatat gggtgatcgg tccgggtgcc gcgtccagga tcgcatgcag
      181 atggccggga tcgtcggggc cgggatcgat gaccgcgaca tgatcgcggc cgatcaggaa
      241 gctgttggtt cccggcccgg tcaacggcga ggggttcggc gcaaggatgc gcagcggctc
      301 tttcggatcg gcgctcatcg tcatagccta gcgtggcgcg aaaggggttg ccacgttgaa
      361 ccacacagag accagttggc tgaaagggct gtttccgcgc gggctttatg gacgggcggc
      421 gctgatcctg atcctgccgg tggtcgtgat caccctggtc gtcagcgtga tgatccttca
      481 gcgccatttc gagggtgtca cccggcagat gacagccagc atggcgcgcg aactggattt
      541 cgtgctgcgc cgcatggacc gcgccgaaaa cttggccacc gcgaagctgg cgggacaatc
      601 catcgccgcg ccgctgggct tgcggctgca gcttccggcg ccggcgcggc agggagacag
      661 tcgggtcttc tacgatttct cgggtcgggt gctgatccgc gaattgcgca acaatgtgcc
      721 cggcatcacc gccatcgacc tggtcggcga cgacagcgtc gtggcggtca ccctgacggg
      781 ccgctacggc cccttctcgg tcaccttcga ccgcacccgc gtgaccgcca ccaatccgca
      841 ccagttattc gtcctgatga ttttcacctc gctgctgatg agcgggatcg ccgtggtctt
      901 tctgcgcaac cagttgcggc cgatccgcag gctggcacgg gcggccgagg aatacggaaa
      961 gggacgcgtg gtcgcctaca ggactgccgg cgcgaccgag gtccgcagcg ccggcaccgc
     1021 gtttctggac atgcgcaacc ggctggaacg gcagaacgaa cagcgcaaga tgatgatgtc
     1081 ggggatcagc cacgatctgc ggacgccgtt gacgcggatg cagcttgggc tgtcgatgat
     1141 ctcgaccgac attccgcccg atgccgatga catcgccgcg atgcaggccg atctggccga
     1201 gatgaaccgc atgatcgacg catttctgga ctatgcccgc gacgatgccc gggaaagccc
     1261 ggccgaggcg atcaacgtgg ccgatttcct cggcgcaatc gccagcgatg ggcaacgggc
     1321 gggccatgat gtcctgctgc tgggggtcag cggcgatccg cagggccagg cgacctttcg
     1381 ccgcgacatg ctgcggcgcg cgcttgaaaa cctgatcggc aatgccgtcc gctatggcag
     1441 ccgggccgag atcgacgcga ccctgggccc gcgcagcctg cggatcgggg tcgaggatga
     1501 cgggccggga atacccgacg acagcctgga ggccgcgatg cgccccttta cccggctgga
     1561 tccgtcgcgc aaccgcaaca gcgggcaagg cgcggggctg gggctggcaa tcgcggccga
     1621 tgtcgcgcgc gggcatggcg gtcagttgcg gctgggccgc ggcgcgcggc tgggcggatt
     1681 gcgggccgag atcgtgatcc cccgctgacg gcgctggccg cgcttcgcga tgcaggtgcg
     1741 gggcgtcctg cgggatccgg tgcgggacct gcctggcagg gcgtcggccg ggcccgcaat
     1801 ccggcagacg ccatcccgga tttccgattg cgcgcccgcc ggacttacat ccatttgcgt
     1861 cccgccggcg gtgtcacata atatgtggta ttctctccgt catattgaac gcggcccgtg
     1921 ccgcgcctag attgtcgcga tgcaggggcc gtgcgtcgcc atgacggggc cacggcttcg
     1981 ggcaggaaag gaacgcaaag caatgaacga attcgcttct cagacctatc cggtgctgcc
     2041 tttgcgcgac atcgtggtgt ttccgcacat gatcgtgccg ctgttcgtgg gccgcgagaa
     2101 atcg
//
LOCUS       DTVW01000668            1722 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1808562, whole
            genome shotgun sequence.
ACCESSION   DTVW01000668 DTVW01000000
VERSION     DTVW01000668.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1722)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1722)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1722
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1808562"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..645)
                     /locus_tag="EYO87_08815"
     CDS             complement(<1..645)
                     /locus_tag="EYO87_08815"
                     /inference="COORDINATES: protein motif:HMM:PF01841.17"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase family protein"
                     /protein_id="HIC66085.1"
                     /translation="MRMKIEVELDYRLAQPGPAILVLEAAGAQGQELIRTSIDTGPVD
                     HFARVPAEEGIGERIIIRATRQIRCSYTAEVLVTRPRPDFDSLALVEIDRMPGDALRY
                     LLPSRYCEAERFTPYVSKRFDGLQGGRKVMAIRDWIEAELDYVPGVSHAGTTAVDTFL
                     ERQGVCRDYAHLMLTLCRAAQIPARIVSVFAPSVQPPDFHAVVEVFLDGAWHLVD"
     gene            complement(769..>1722)
                     /locus_tag="EYO87_08820"
     CDS             complement(769..>1722)
                     /locus_tag="EYO87_08820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007798733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S1 RNA-binding domain-containing protein"
                     /protein_id="HIC66086.1"
                     /translation="ARRLQDPLAELVKVPPESIGVGQYQHDVDQRQLARTLEAMVEDA
                     VNAVGVDLNTASAPLLAHVAGLGPSLAQNIVAHRDAQGAFRSRAALKKVAGLGPRAYE
                     QCAGFLRIRDGDEPLDASAVHPEAYGLARRIVAACGRDIRAIMGQAGALKSLRAETFV
                     DAHFGLPTIRDILSELEKPGRDPRPGFVTASFADGVDRITDLKPGMSLEGTVTNVAAF
                     GAFVDIGVHQDGLVHISQLADRFVKDPNEVVKVGDVIRVRVTEIDLARNRIGLTMRKD
                     GGAGATRQAGPDHAAAPDPAPGPDAAAGAFGAALANAMRRR"
BASE COUNT          279 a          573 c          604 g          266 t
ORIGIN      
        1 atcgaccaga tgccaggcgc catcaagaaa gacctcgacg acggcgtgga aatcgggcgg
       61 ctggaccgag ggggcgaaga cgctgacgat gcgggccgga atctgcgcgg cgcggcacag
      121 ggtcagcatc agatgggcat agtcccggca gacgccttgc cgttccagga aggtgtccac
      181 ggccgtcgtg ccggcgtggc tgacgcccgg aacataatcc agttcggcct cgatccagtc
      241 gcggatcgcc atgaccttgc ggccgccctg gaggccatcg aaccgcttcg agacataggg
      301 ggtaaagcgt tcggcctcgc aatagcgcga gggcagaaga tagcgcagcg catcgccggg
      361 catccggtcg atctcgacca gggcgaggga gtcgaaatcg ggccgcggcc gcgtcaccag
      421 aacctcggcg gtataagagc agcggatctg gcgtgtggcg cggatgatga tgcgctcgcc
      481 gataccctct tccgcgggga cgcgggcgaa atgatccacc gggccggtgt cgatcgaggt
      541 tctgatcagt tcctgtccct gtgcgccggc ggcttccaga acgaggatcg caggcccggg
      601 ttgggcgagg cggtaatcca gctcgacctc gatcttcatc cgcatggctg atcctttcgt
      661 gatgggcgcc cggccagggc gtcggccggg acgcaaccgc gcggcgcctt gcctatttcg
      721 ggacccgggc gccgtcgtgc aagccccggc agacgacggc catgacactc agcggcggcg
      781 catcgcattg gccagcgcgg caccaaaggc acccgccgcg gcatccggtc cgggggccgg
      841 atcgggtgcc gcggcgtgat cgggcccggc ctgtcgggtg gctccggccc cgccatcctt
      901 gcgcatggtc agcccgatcc ggttgcgggc caggtcgatc tcggtcacgc ggacgcgaat
      961 cacgtcgccg accttcacca cctcgttcgg atccttcacg aaacggtcgg ccaactggct
     1021 gatgtggacc agtccgtcct ggtgcacgcc gatatcgacg aaggcgccga aggctgcgac
     1081 attggtgacg gtgccttcca gcgacatgcc gggtttcaga tcggtgatcc gatcgacgcc
     1141 atcggcgaag ctggccgtga cgaagccggg gcgcggatcg cggccgggct tttccagttc
     1201 ggacaggatg tcccggatgg tcggcaggcc gaaatgcgcg tccacgaagg tctcggcccg
     1261 aagggatttc agcgccccgg cctgacccat gatggcgcgg atgtcgcggc cacaggcggc
     1321 gacgatccga cgcgccaggc cgtaggcctc ggggtgcacg gccgaggcgt ccagcggctc
     1381 atcgccgtcg cggatgcgca ggaatccggc gcattgttcg taggcccgcg gaccaagccc
     1441 cgcgaccttc ttcagcgccg cgcgggatcg gaacgccccc tgggcatcgc gatgggcgac
     1501 gatgttctgc gccagcgacg ggcccagtcc ggccacatgg gccagcagcg gcgccgaggc
     1561 cgtgttcaga tcgactccga cggcgttcac cgcatcctcg accatcgcct ccagtgtcct
     1621 ggcaagctgg cgctggtcca cgtcgtgctg atactgcccg acgccgatgc tttcgggcgg
     1681 caccttgacc agttcggcca gcggatcctg caggcggcgc gc
//
LOCUS       DTVW01000669            1012 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1809663, whole
            genome shotgun sequence.
ACCESSION   DTVW01000669 DTVW01000000
VERSION     DTVW01000669.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1012)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1012)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1012
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1809663"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..687
                     /locus_tag="EYO87_08825"
     CDS             <1..687
                     /locus_tag="EYO87_08825"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352055.1"
                     /note="with component II, the glutamine amidotransferase,
                     catalyzes the formation of anthranilate from chorismate
                     and glutamine; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate synthase component I"
                     /protein_id="HIC66087.1"
                     /translation="TNPSPFMFFLNMGGFQIVGASPEILVRLRDGEVTIRPIAGTRPR
                     GANEAEDRALEAELLGDQKELAEHLMLLDLGRNDVGRVARTGTVRPTEQFTIERYSHV
                     MHIVSNVVGELREGEDGLSALLAGLPAGTVSGAPKVRAMQIIDELEPEKRGVYAGAVG
                     YFAGNGEMDMCIALRTGVVKDGSLYIQAGGGVVYDSDPEAEFQETVNKSRALQRAAES
                     ASRFVRGGNG"
BASE COUNT          178 a          326 c          344 g          164 t
ORIGIN      
        1 accaatccct cgcccttcat gttcttcctg aacatgggcg gatttcagat cgtgggcgcc
       61 agtcccgaaa tcctcgtgcg tctgcgcgac ggcgaggtga cgatacgacc catcgccgga
      121 acccgaccgc gcggggcgaa cgaggccgag gaccgcgcgc tggaggccga acttctgggc
      181 gatcagaaag agctggccga acatctgatg ctgctggatc tgggccgcaa cgatgtcggt
      241 cgtgtcgcca gaaccggcac tgtccgtccc accgagcaat tcaccatcga gcgctacagc
      301 cacgtcatgc atatcgtgtc gaatgtcgtg ggagaattgc gcgaaggcga ggatggcttg
      361 tcagcgttgc tggcgggtct gccggcgggc acggtttcgg gggcgcccaa ggtccgcgcg
      421 atgcagatca tcgacgaact ggagcccgaa aagcgcggcg tctatgccgg tgcggtcggc
      481 tatttcgccg gcaatggcga gatggacatg tgcatcgcct tgcggaccgg ggtggtcaag
      541 gacggctcgc tttacattca ggcgggcggc ggggtggtct atgacagcga tcccgaggcc
      601 gaattccagg aaaccgtgaa caagagccgc gccctgcaac gcgccgccga aagtgcatcg
      661 cggttcgtgc gcggcggaaa cggctagcgg gtcgcttgcg gcgcaaccgc gtgctgcatg
      721 accgggccgg ccccggttgg cgcatggctg accgatcgct tgcggcgcaa ccgcgatcgc
      781 aaaaaaaaaa cggccccgaa gggccgcttc aatcattacc taaccgcagg ccctagttgc
      841 tggccggctt ctcttcggtc gtcatgccgc catctgccgg cgccatgcca tcgaccgggg
      901 ccgctgcacc atctgccggc gcagcaccat cagccggagc cgctgccgga tcagccggag
      961 ccgctgccgg gtcggccgga gccgctgccg gatcggccgg ggccatcgcc gg
//
LOCUS       DTVW01000670            1229 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1810091, whole
            genome shotgun sequence.
ACCESSION   DTVW01000670 DTVW01000000
VERSION     DTVW01000670.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1229)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1229)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1229
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1810091"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>1229
                     /locus_tag="EYO87_08830"
     CDS             <1..>1229
                     /locus_tag="EYO87_08830"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HIC66088.1"
                     /translation="TALRNLAGSVSVDGQDVMPAVRETHDRMAAFARDVRDGGFTGQG
                     GRITDVVNIGIGGSDLGPAMAVLALAPYHDGPRTHFVSNVDGADIADTLAGLDPATTL
                     VIVASKTFTTIETMTNARTARDWMARSVSEPAAQFAALSSAADRTADFGIDPARVFGF
                     EDWVGGRYSVWGPIGLSLMLAVGPEDFDRFLAGGAAMDAHFRTAPLAGNLPVLLALTG
                     IWHHQICGYPTRAVLPYDNRLLRLPAYLQQLEMESNGKRVAMDGSDLTTTSGPVVWGE
                     PGTNGQHAFYQLIHQGTVIVPCEFILAARGHEDDLAQHHILLAANCLAQSEALMRGRS
                     LDEARSLMAAKGLDGAELDRQARHRVFPGNRPSTTLLIPQLTPFTLGQIVALYEHRVF
                     VEGVILGINSFDQWGVEL"
BASE COUNT          189 a          402 c          420 g          218 t
ORIGIN      
        1 accgccctgc gcaatcttgc gggcagcgtg agcgtggacg gccaggacgt gatgcccgcc
       61 gtgcgcgaga cgcatgaccg gatggcggcc tttgcccgcg acgttcgcga cggcggcttc
      121 acggggcagg gcgggcgcat caccgatgtg gtgaatatcg gcattggcgg ttccgatctg
      181 ggcccggcca tggccgttct ggcgctggca ccctatcacg acgggccacg gacgcatttc
      241 gtgtcgaacg tggacggggc cgatatcgcc gatacgctgg ccgggctgga cccggccacg
      301 acgctggtca tcgtggcctc gaagaccttt accaccatcg agacgatgac gaatgcgcgc
      361 acggcgcgcg actggatggc gagatccgtc agcgaaccgg cggcgcaatt cgcggcactg
      421 tcctcggccg ccgacaggac cgcggatttt ggcatcgacc ctgcccgcgt gttcggcttc
      481 gaggattggg tcggcgggcg ttattcggtc tgggggccga tcgggctgtc gctgatgctg
      541 gccgtcgggc ccgaggattt cgaccgcttc ctggcaggcg gcgcggcgat ggacgcgcat
      601 ttccgcaccg cgccgctggc ggggaacctg ccggtcctgc tggcgctgac ggggatctgg
      661 catcatcaga tctgcggcta tccgacgcgc gccgtgctgc cctacgacaa ccgcctgctg
      721 cggctgccgg cctatctgca acagcttgaa atggaatcga atggcaagcg cgtggccatg
      781 gatggcagcg atctgaccac cacctccggc cccgtggtct ggggcgagcc gggcaccaat
      841 ggccagcacg ccttctacca gttgatccat cagggcaccg tgatcgtgcc gtgcgaattc
      901 atcctggccg cgcgcggtca cgaggacgac ctggcccaac accacattct gctggccgcc
      961 aattgcctgg cccagtccga ggcgctgatg cgtggccgca gcctggacga ggcgcgcagc
     1021 ttgatggccg cgaaggggct ggacggggcc gagcttgacc gacaggcccg tcaccgggtc
     1081 tttccgggca accgcccctc gaccactctg ctgatcccgc aactgacacc ctttaccctt
     1141 ggtcagatcg ttgcgctgta cgagcatcgc gtctttgtcg agggggtgat tctcgggatc
     1201 aacagctttg atcagtgggg cgtcgaact
//
LOCUS       DTVW01000671            3256 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1812291, whole
            genome shotgun sequence.
ACCESSION   DTVW01000671 DTVW01000000
VERSION     DTVW01000671.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3256)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3256)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3256
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1812291"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(126..317)
                     /locus_tag="EYO87_08835"
     CDS             complement(126..317)
                     /locus_tag="EYO87_08835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66089.1"
                     /translation="MADWMLLSFLSFAGAALVVFLIAVRRGMFVGMEEAKYPLLSVEE
                     PDYYTPEWAKEDGDAAQWK"
     gene            complement(427..1866)
                     /locus_tag="EYO87_08840"
     CDS             complement(427..1866)
                     /locus_tag="EYO87_08840"
                     /inference="COORDINATES: protein motif:HMM:PF13442.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HIC66090.1"
                     /translation="MDNRNRIPEHPPYPEKLLRAHRGRRMLMTPGMVAIGGLLAFFTV
                     VFSVVVLPTSTYKPQVSPNWLPLDDTQVSGRAVYLANGCVYCHSGFSRPQDVFTGSSA
                     LYARASQPGDYAGISQSPNTLGSIRTGPDMSNEGGTHPDGWHRSHYWNARSTTPMSVM
                     PRFSFLSADETDALISYTQSQGGKLAALRYAATQTGNYLMRLNAGKAGLDDPGVPVAD
                     LVAQLRGTGELRENGTPKDKAPSGMSWMDVWHMNSFSRSYWLTDNPLEVNAENLMRGK
                     ATYIQRCAGCHGRNGDGKGPGAERLKVKPFDFTQTNLPYDTGTSSGMMYHRILTAGPG
                     TAMENFGTRLSVAEIWRTVMFLRTIPNGGLKETLPTVEMYERWNPPETALRYIAENPI
                     DETYTDLPKTDDPFMQAARWIAPGMTANDTIYVGGKLPITLDRLAGVIGGLYRADIQR
                     RYDDATARGEAIPALAELQDTEGLVFHAP"
     gene            complement(1871..>3256)
                     /locus_tag="EYO87_08845"
     CDS             complement(1871..>3256)
                     /locus_tag="EYO87_08845"
                     /inference="COORDINATES: protein motif:HMM:PF00115.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase"
                     /protein_id="HIC66091.1"
                     /translation="FWLMFVTLVGLTIATELIAPNIFAGIPYLVFSRIRPIHVNGVIF
                     AWLSMMYFGGAFYVLPRLLGLREMWGESLAVWMAWAWNLTMAAGFAGLSMGYTQGREY
                     TELIWPVDVAVVVVLLINIYIILMTVLARRIRPLYVTVWWSVASPIWLAADYFIVNVM
                     WRPGTLLGNGIPGARLSGALEDPLADGMLNWWGNHNLFGLWLTPMMVGLMYYFVPKIT
                     RTPLYSHTLSLVSFWGIAFFYTGVGHHHLLQAPIPGWLKTFATVNSIMLLVPVFAFVG
                     NIWLTMRGNWDKFFVNIPLRFMLTGFLFYFLVNVQGSFMAVPAFNKMIHFTNFIVAHA
                     HLALLGAFTFFGMGLIEYMVPQMARRPVYSRKISEWTYWLLLTGFFGFFWVLTIASFL
                     QGESWARGEPEVNVLAMIRPQYIGRAIFGALIVFSTFTLAWNVVATVFSDTSAGTRRA
                     FRRAVALEPGE"
BASE COUNT          630 a         1023 c         1046 g          557 t
ORIGIN      
        1 tcagggtgac cgcgaacagc acctcataga tcggcccgcg ccacaggatc tcggtgcgat
       61 cggtcgggat gcgatccata tactgggcat agatatagcg gttgatcgca tccaccgtcg
      121 cgggatcact tccactgggc tgcatcaccg tcctccttcg cccattcggg cgtgtaataa
      181 tcgggctctt cgaccgaaag cagcggatat ttcgcctctt ccatgccgac gaacattccc
      241 cgccggaccg cgatcaggaa caccaccagc gccgcgccgg caaaggacag gaacgacagc
      301 agcatccagt ccgccatgac gaactccgcg ccctttggag agacgctggc ccatgccggt
      361 gcggcggcca tggcgagggc ggaggccgcg gcgcaggcgg cggccgtttg gcgcggttga
      421 aaatgatcag ggtgcatgga acaccagccc ttccgtatcc tgcagttcgg caagcgcggg
      481 aatcgcctcg ccgcgcgccg tggcgtcgtc gtatcggcgc tggatgtcgg cccggtacaa
      541 tccgccgatc accccggcga gccggtcaag ggtgatgggc agcttgccgc cgacatagat
      601 cgtgtcgttc gcggtcatgc cgggcgcgat ccagcgcgcg gcctgcatga acgggtcatc
      661 ggtcttcggc aggtcggtat aggtctcgtc gatcgggttt tccgcgatat agcgcagcgc
      721 ggtttcaggg ggattccagc gttcgtacat ttcgacggtg ggcagggttt ccttcagtcc
      781 gccattgggg atggtgcgca ggaacatcac cgtgcgccag atctcggcga ccgacaggcg
      841 ggtgccgaaa ttctccatcg cggtgccggg cccggcggtc aggatgcggt gatacatcat
      901 gccgctggag gtgccggtgt catagggcag gttggtctgg gtgaaatcga agggcttgac
      961 cttcagccgc tcggcgcccg gccccttgcc gtcaccattg cggccatgac agcccgcgca
     1021 gcgctgtata taggtcgcct tgccgcgcat caggttctcg gcattgacct ccagcgggtt
     1081 gtcggtcagc cagtaggatc gcgagaagct gttcatgtgc cagacgtcca tccagctcat
     1141 gccgcttggt gccttgtcct tgggcgtgcc gttctcgcgc agctcgcccg tgccgcgcaa
     1201 ctgcgccacc agatcggcca ccggcacgcc gggatcgtcc agacccgcct tgccggcatt
     1261 gagccgcatc aggtagttgc cggtctgcgt cgccgcatag cgcagtgccg caagcttgcc
     1321 gccctggctt tgcgtatagc tgatcagcgc atcggtctcg tcggcgctga gaaagctgaa
     1381 gcggggcatc accgacatcg gtgtggtgct gcgcgcgttc cagtaatgcg agcggtgcca
     1441 gccatccgga tgggtgccgc cttcgttcga catgtccggc ccggtgcgga tactgcccag
     1501 cgtgttcggg ctctggctga tgccggcata gtcgcccggc tgcgaggcgc gcgcgtaaag
     1561 cgccgaggat ccggtgaaga catcctgcgg ccggctgaag ccgctatggc aataaacgca
     1621 gccattggcc agatagacgg cgcggcctga tacctgggta tcgtccagcg gcagccagtt
     1681 gggcgatacc tgtggcttgt aggtgctggt gggcaggacg accaccgaaa acaccacggt
     1741 gaaaaaggcc agaagcccgc cgatcgccac catgccgggg gtcatcagca tccggcggcc
     1801 acgatgtgcg cgcagcagct tttcggggta gggggggtgt tcggggatgc ggttgcggtt
     1861 gtccatgtcg ctactctccc ggctccaggg ccacggcacg gcggaaggcg cggcgggtgc
     1921 cggcgctcgt atcgctgaac acggtggcga cgacgttcca tgccagggtg aaggtcgaga
     1981 acacgatcag cgcgccgaag atcgcgcggc cgatatattg cggccggatc atcgccagaa
     2041 cattgacctc gggctcgccc cgcgcccagc tttcgccttg caggaagctg gcgatggtca
     2101 gcacccagaa gaagccgaaa aagcccgtca gcagcagcca gtaggtccat tccgaaatct
     2161 tgcggctgta gaccggccgc cgcgccatct gcggcaccat gtattcgatc agccccatgc
     2221 cgaagaaggt gaacgccccc agcagcgcca gatgggcgtg cgcgacgatg aaattggtga
     2281 agtggatcat cttgttgaac gccggcaccg ccatgaaaga gccctgcacg ttgaccagga
     2341 aatagaacag gaacccggtc agcatgaagc gcagcggaat gttgacgaag aacttgtccc
     2401 agttgccgcg catggtcagc cagatattgc ccacgaaggc gaagaccgga accagcagca
     2461 tgatcgagtt gacggtggcg aaggtcttca gccagccggg gatgggcgcc tgcaacagat
     2521 ggtggtgccc gaccccggtg tagaagaagg cgatgcccca gaacgacacc agcgacaggg
     2581 tgtggctgta aagcggcgtt cgggtgatct tgggcacgaa gtaatacatc agcccgacca
     2641 tcatcggcgt cagccacaat ccgaacaggt tgtggtttcc ccaccagttc agcattccgt
     2701 cggccagcgg gtcttccagc gcgccggaca gccgcgcccc cggaatgccg ttgcccagca
     2761 acgtgcccgg ccgccacatc acgttgacga tgaaataatc tgcggccagc cagatcgggc
     2821 tggcgacgct ccaccagacg gtgacgtaaa gcggcctgat ccgccgcgcc agcaccgtca
     2881 tcaggatgat gtagatgttg atcagcagca cgaccaccac cgccacatcg accggccaga
     2941 tcagttcggt atattcacgc ccctgggtat atcccatcga cagcccggca aagcccgcgg
     3001 ccatcgtcag gttccacgcc cacgccatcc agaccgcaag gctttcgccc cacatttccc
     3061 gcaagcccag aagccgcggc aggacataga aggcaccgcc gaaatacatc atcgacagcc
     3121 aggcgaagat gaccccgttc acgtggatcg gccggatccg gctgaagacc agatagggga
     3181 tgccggcaaa gatgttcggc gcgatcaact cggtcgcgat ggtcaggccg accagggtga
     3241 cgaacatcag ccagaa
//
LOCUS       DTVW01000672            2583 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1813460, whole
            genome shotgun sequence.
ACCESSION   DTVW01000672 DTVW01000000
VERSION     DTVW01000672.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2583)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2583)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2583
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1813460"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(90..533)
                     /gene="bamE"
                     /locus_tag="EYO87_08850"
     CDS             complement(90..533)
                     /gene="bamE"
                     /locus_tag="EYO87_08850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008186476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamE"
                     /protein_id="HIC66092.1"
                     /translation="MAAFRNLLILAFVAVLAACAPVYRNHGYVPPDSDLAKVVVGQTS
                     MDQLEGLIGRPSAQGLLTGAGWYYVGSRWRNFGALPPQEVDREVVAISFAPSGVVSNI
                     ERFGQERGRVVVLSRRVTEGSVTEVSFIRQLLGNLGNFQAGDFIE"
     gene            677..1225
                     /locus_tag="EYO87_08855"
     CDS             677..1225
                     /locus_tag="EYO87_08855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF177 domain-containing protein"
                     /protein_id="HIC66093.1"
                     /translation="MTAPAQPSASQPQRLRVAHLDPRGPTDFALRPAAEARAAIAAEL
                     NILALPGLAFEGRIRAEGGQAWALSGRLTAQVVQSCVVTLKPVKTRIEEDVRRLYSPH
                     LRDPEGDEVEMPDETLEPLGQFIDLSAVMIEELALSLPDYPRAQGAELTPDARDDDGR
                     PETRRPFEGLDRLMRGDGDVQG"
     gene            1474..1680
                     /locus_tag="EYO87_08860"
     CDS             1474..1680
                     /locus_tag="EYO87_08860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020040313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32"
                     /protein_id="HIC66094.1"
                     /translation="MAVPQNRVTRSKRNMRRAHDALVAGNPNECSNCGELKRPHHVCP
                     SCGHYADREVIAQANEIDLDDDAA"
     gene            1703..>2583
                     /gene="plsX"
                     /locus_tag="EYO87_08865"
     CDS             1703..>2583
                     /gene="plsX"
                     /locus_tag="EYO87_08865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010139137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase PlsX"
                     /protein_id="HIC66095.1"
                     /translation="MTDDPATIQEQRAPENRGSVVISVDAMGGDRGPLAVVAGMAESA
                     GKNPEIRFIVHGDQDQLRRLINRRKQLSDRCDIRHAAGVVTMEDKPSQILRKGDGTSM
                     WSAIESVRKGEAGAAVSCGNTGALMALSMLRLRKLPGVNRPAIACLWPSKNPQGFNIM
                     LDVGADIRADAPDLLQYAMMGASYARNGLDVERPRVGLLNVGTEEHKGRAELKQAHDL
                     IADAAGTGGFDYVGFVEGGDLPSSRVDVIVTDGFTGNIALKTGEGTAKLVGEFLRAAF
                     ANSIMSKFAAVLAMTSL"
BASE COUNT          464 a          876 c          841 g          402 t
ORIGIN      
        1 atcggccgcc tgtcgctggc gattggccag gtgttcaaca accagcacaa gctctgtatc
       61 gacctgaacg gcccggcccg cccgccgcgt cactcgatga agtcgccggc ctggaaattg
      121 cccaggttgc cgagaagctg gcggatgaac gaaacctcgg taacgctgcc ctccgtcacg
      181 cggcgcgaca gcaccacgac gcggccacgt tcctgcccga aacgttcgat attggacacg
      241 accccgctgg gcgcgaagga aatcgccacg acttctcgat ccacctcttg cgggggcagc
      301 gcgccaaaat tgcgccagcg cgagccgaca taataccacc ccgcaccggt cagcagaccc
      361 tgcgccgagg gccggccgat cagcccctcc agttgatcca tgctggtctg gccgacgacc
      421 accttcgcca gatcggaatc gggcggcaca tagccgtgat tgcgatagac gggcgcacag
      481 gcggccagca cggccacgaa agccaggatc agaaggttcc tgaaggcagc catgcgggtt
      541 tcctttgtgc gggcggttga cgcggcccgc ccggcttagc aaactccggc gcggcgctca
      601 agaagtccat ccgcgacgag ggcttgtgcc gcaggtcacc gccgcatgtc gcaagccaac
      661 tgcccgaggc acgatcatga cagccccagc acagccctcc gcgtcgcagc cgcaacgcct
      721 gcgcgtcgcc catctggatc cgcgcggccc gaccgatttc gcgctgcgtc ccgcggccga
      781 ggcgcgcgcg gccatcgcgg ccgaactgaa catcctcgcc ctgcccggcc tggctttcga
      841 gggccggatc agggccgagg gcggccaagc ctgggcgttg tcgggccggc tgacggcaca
      901 ggtcgtgcag tcctgcgtgg tgacgctgaa gccggtgaag acccggatcg aggaagatgt
      961 gcgccgcctc tattccccgc atctgcgcga ccccgagggc gacgaggtcg agatgccgga
     1021 cgaaacgctg gaaccgctgg gccagttcat cgacctttcg gccgtgatga tcgaggaact
     1081 ggcgctgtcc ttgccggatt atccccgcgc gcaaggcgcc gaactgacgc cggatgcccg
     1141 cgatgatgac ggccggcccg agacgcgacg gcccttcgag gggcttgacc ggctgatgcg
     1201 gggggacggc gacgtccagg gataggggcc cggaacctgc gccgccgcgc cgttgcaatg
     1261 cagccacaga atcgcggccg atcatgcgga ttcgtcctgc cggaccagaa tgggctggcg
     1321 cggcgccacc gccgcggcgc atttatgggc aagccgaccc aagcgagggc ttgcaggcgc
     1381 gggttctatc gcgtatctgc gcggttcatt tacgaataca aaactcatgg tgccacggct
     1441 ttcggcccgc acccagacaa ccgaggtcga gacatggctg tccctcagaa tcgcgtcacc
     1501 cgctccaagc gcaacatgcg tcgtgcccat gacgcgctgg tcgccggcaa ccccaacgaa
     1561 tgttcgaatt gcggcgaatt gaagcgtccg catcacgtct gcccgtcctg cggccattac
     1621 gccgatcgcg aggtgatcgc ccaggcgaac gagatcgacc tggacgacga cgcggcctga
     1681 tcgggtcggg ccctcccgcc atatgaccga cgatccagcg accattcagg aacagcgcgc
     1741 ccccgagaac cggggcagcg tggtgatttc ggttgacgcg atgggtggcg atcgcggccc
     1801 cctcgccgtg gtggccggca tggccgaaag cgccggaaag aaccccgaga tccgctttat
     1861 cgtgcatggc gaccaggatc agcttcgccg tctgatcaac cgccgcaagc aattgtccga
     1921 ccgctgcgac atccgccatg ccgcgggtgt cgtgacgatg gaagacaagc ccagccagat
     1981 cctgcgcaag ggcgacggca cctcgatgtg gtcggcgatc gaatcggttc gcaagggcga
     2041 ggccggggcc gccgtcagtt gcggcaatac cggcgcgctg atggcgctgt cgatgctgcg
     2101 cctgcgcaag ctgccgggcg tgaaccgtcc cgccatcgcc tgtctgtggc cctcgaagaa
     2161 ccctcagggc ttcaacatca tgctggatgt gggcgcggat atccgcgccg acgcgcctga
     2221 cctgttgcaa tatgcgatga tgggcgcctc ctacgcccgc aacggcctgg acgtcgaacg
     2281 cccgcgcgtc ggcctgctga atgtcggcac cgaggaacac aaggggcgcg ccgaactgaa
     2341 acaggcccac gacctgatcg ctgacgccgc cggaaccggc ggtttcgact atgtcggttt
     2401 cgtcgagggc ggcgatctgc cgtcgtcgcg cgtcgatgtg atcgtgaccg acggctttac
     2461 cggcaatatc gccctgaaga cgggcgaggg cacggccaag ctggtgggcg agttcctgcg
     2521 cgcggccttc gccaattcga tcatgtcgaa attcgcggcc gtgctggcca tgacctcttt
     2581 gaa
//
LOCUS       DTVW01000673            1593 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1820248, whole
            genome shotgun sequence.
ACCESSION   DTVW01000673 DTVW01000000
VERSION     DTVW01000673.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1593)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1593)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1593
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1820248"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..418
                     /locus_tag="EYO87_08870"
     CDS             <1..418
                     /locus_tag="EYO87_08870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010392968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SIS domain-containing protein"
                     /protein_id="HIC66096.1"
                     /translation="RGALYPVALEGALKLKELSYIHAEGYASGELKHGPIALIDRDLP
                     VIVLAPHDALFDKTVSNMQEVMARHGQILLVSDQAGIAAGGEGVHATLRLPSGGGAFQ
                     PILYAIPMQYLAYHTAVAKGTDVDQPRNLAKSVTVE"
     gene            467..1078
                     /locus_tag="EYO87_08875"
     CDS             467..1078
                     /locus_tag="EYO87_08875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66097.1"
                     /translation="MWRLLVLALCLLPLAAAAQERPQTGLMWNRSGLPATFPLQVKTL
                     PGKDYLVHVTEPGSGRAVMAGYIRGGDFFRLLVPPGQWRLRFAYGLDWQGKDALFGPE
                     TGRTEMRQVLDFSILGLNRRRVYIVTLIEENGTMKIVDADPRAECQIVSWTSEDAEYP
                     PERGLDPVMRERRYGIPRPNGLEAPPKLRYIERSFVIRKRLCG"
     gene            complement(1079..1402)
                     /locus_tag="EYO87_08880"
     CDS             complement(1079..1402)
                     /locus_tag="EYO87_08880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009815298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly accessory protein"
                     /protein_id="HIC66098.1"
                     /translation="MNLPPKVTERAFAHLAEINAGGDVRPLRVAVAGGGCSGFQYEIR
                     LDQAEADDLVLEGAGQRVVVDPVSLPYLAGAVIDFADELIGARFTIDNPNATSSCGCG
                     TSFSM"
BASE COUNT          275 a          521 c          519 g          278 t
ORIGIN      
        1 gcgcggggcg ctgtatccgg tggcgctgga aggagcgctg aagctgaagg aactcagcta
       61 tattcacgcc gaaggctatg cctcggggga attgaagcac ggccctatcg cgctgatcga
      121 ccgcgatctg ccggtgatcg ttctggcccc ccatgatgcg ctgttcgaca agaccgtctc
      181 gaacatgcag gaggtgatgg cccggcacgg gcagattctg ctggtctcgg accaggccgg
      241 gatcgcggcg gggggcgagg gtgtgcacgc cacgctgcgc ctgccctcgg gtggcggggc
      301 gttccagccg atcctctatg cgatcccgat gcaatatctg gcctatcaca cggcggtggc
      361 gaaaggcacg gatgtggatc agccgcgcaa tctggcgaaa tccgtcacgg tcgagtgatg
      421 cccgcgcggc gtgacgccgc gccccttccg cgctaggatc ggaaccatgt ggcgccttct
      481 ggtccttgcg ctgtgccttc tgccgcttgc ggcggccgca caggaacgtc cgcagaccgg
      541 actgatgtgg aaccgcagcg ggttgcccgc gacctttccg ctgcaggtca agaccctgcc
      601 cggcaaggat tacctggtcc atgtgaccga acctggcagc ggccgggcgg tcatggcggg
      661 ctatatccgt ggcggggatt tctttcgtct tctggtgccg cccggccagt ggcggctgcg
      721 tttcgcctat ggcctcgact ggcagggaaa agatgccctc ttcggcccgg agacaggccg
      781 gaccgagatg cggcaggttc tggatttcag cattctcggc ctgaatcggc gccgcgtcta
      841 tatcgtcacg ctcatcgagg agaacggcac catgaagatc gtcgatgcgg acccgcgcgc
      901 ggaatgccag atcgtgtcgt ggaccagcga ggacgccgaa tacccgccgg aacgcgggct
      961 ggatccggtc atgcgggaac gccgttacgg cattccgcga cccaacggtc tggaggcgcc
     1021 gcccaagctg cgctatatcg agcgcagctt cgtgatccgc aaacgcctct gcggctgatc
     1081 acatcgaaaa ggacgtgcca cagccgcaac ttgaggtggc gttcggattg tcgatggtga
     1141 accgggcgcc gatcagctca tccgcgaaat cgatcaccgc gcccgccaga tagggcagcg
     1201 aaaccggatc gacgacgacc cgctggccgg cgccttccag caccagatcg tcggcttcgg
     1261 cctgatccag ccggatctcg tattgaaacc cggaacagcc gcccccggcc accgcgacgc
     1321 gcagcggacg gacgtcgccg cccgcattga tctcggcaag gtgggcaaag gcccgttcgg
     1381 tcactttcgg aggcaggttc atggggcgtt cccgttttcg tccttgggtc aggaatatag
     1441 gctctgcacg catccctcgc aaggaaggac cgcgccttgt ccaccgcccc ctatgcctgc
     1501 cagcccgaag acagtcgcgg caggctgcat ccggaaagcc tgtccacctt ccgctcgccc
     1561 tggcagcgcg accgcgaccg gatcatccat tcc
//
LOCUS       DTVW01000674            1333 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1820729, whole
            genome shotgun sequence.
ACCESSION   DTVW01000674 DTVW01000000
VERSION     DTVW01000674.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1333)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1333)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1333
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1820729"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..263)
                     /locus_tag="EYO87_08885"
     CDS             complement(<1..263)
                     /locus_tag="EYO87_08885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66099.1"
                     /translation="MTTPSDTQSLILSRAATRPGNLALPLPEGLVGAAAKMVVGKMIA
                     RGWLEEVEANLRRHEPMWRETGDGHGTTLIATEAGLEAMGIEPL"
     gene            complement(359..586)
                     /locus_tag="EYO87_08890"
     CDS             complement(359..586)
                     /locus_tag="EYO87_08890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66100.1"
                     /translation="MTTRRAAPNDKALDAFITAKAEIDTMLERLKALSDDHFETHPDE
                     IHWGHVGTLKHYAGLLRQITDSAFKEGEHAA"
     gene            complement(698..900)
                     /locus_tag="EYO87_08895"
                     /pseudo
     CDS             complement(698..900)
                     /locus_tag="EYO87_08895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998469.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            1035..1256
                     /locus_tag="EYO87_08900"
                     /pseudo
     CDS             1035..1256
                     /locus_tag="EYO87_08900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015923038.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT          204 a          387 c          484 g          258 t
ORIGIN      
        1 agtggctcga tccccatggc ctccagcccg gcctcggtcg cgatcagcgt ggtgccgtgg
       61 ccgtcaccgg tctcgcgcca catcggctca tggcggcgca ggttggcctc gacctcctcg
      121 agccagccgc gggcaatcat cttgccgacc accatcttgg cggcggcgcc gaccagcccc
      181 tcgggcagtg gcagggcgag gttgcccggc cgcgtcgcgg cgcgggacag gatcagggac
      241 tgggtgtcgg acggggtggt catcggggcc tccgtggctg tgggcgcgcg gtttgcgcgc
      301 cttctacgaa ggcaagcccc gtcatcggac ggggcggccg tcgcgccgta tgggcgcgtc
      361 aggcggcgtg ttcgccttcc ttgaaggcgc tgtcggtgat ctggcgcagc aggcccgcgt
      421 agtgcttcag cgtcccgacg tgcccccaat ggatctcgtc ggggtgggtc tcgaagtggt
      481 cgtcgctgag ggccttcagg cgttccagca tcgtgtcgat ctcggccttg gcggtgatga
      541 aggcgtcgag ggccttgtcg ttcggggcag cgcggcgggt ggtcatggcg gggcatcctt
      601 cggtgagttg catcgttctg gtgcgaacac catcgctctg tcgggcggat gatcgtaggc
      661 aaatcggagc aatatcagtg ctttctgatc attccgctca aatcagccgc atctccgcca
      721 gcgtgcgact ggcagcgcca agctgggcgg tcggcagttc gatcttcagg tgcgacagga
      781 cgtcggaggc ctcggccgga atcccgctct cgcgcagtgc ctgctcgatg acctcagcaa
      841 tggcatccgg gcggctcagg tcgaagtgga atagtcgatg cggatggtgg tcgtggtcat
      901 gatgaagcct tcctgggatc ggcgcgatgt agcctgttga tggacaagag aatcgctctg
      961 aagggggagg caatcaacgg gaatgatcgt cctttcctgt ttattataaa tatcttgaaa
     1021 ggcttcacag cgcaatgaag ggcatgagcg agcgggagta cgcggcgcat tccgggctgt
     1081 cgcgcggcgg ggtgcagaag gcgcggaaga acgggcggct ggtggtccat gacgacgggt
     1141 cgatcaatgc cgcggcctcg gacgtgcggc gggccgagat gaccgacccc gaccagcagc
     1201 ggcgcagctt gggtggtgac gggctggcca gcggccccgg cgacacgaca tcctactact
     1261 acagttgcgg atagtgtcga atttttcggt gtgcgatggc tgcggcgact tggtgctctc
     1321 gtcgccatcg tga
//
LOCUS       DTVW01000675            1295 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1821095, whole
            genome shotgun sequence.
ACCESSION   DTVW01000675 DTVW01000000
VERSION     DTVW01000675.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1295)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1295)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1295
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1821095"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(77..406)
                     /gene="rplT"
                     /locus_tag="EYO87_08905"
                     /pseudo
     CDS             complement(77..406)
                     /gene="rplT"
                     /locus_tag="EYO87_08905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007796779.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L20"
     gene            complement(424..624)
                     /gene="rpmI"
                     /locus_tag="EYO87_08910"
     CDS             complement(424..624)
                     /gene="rpmI"
                     /locus_tag="EYO87_08910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_351813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L35"
                     /protein_id="HIC66101.1"
                     /translation="MPKMKTKAAAKKRFSMTATGKVKSAQAGKRHGMIKRTTKFIRDA
                     RGTTVLSDADARIVKKYMPYNR"
     gene            complement(741..974)
                     /locus_tag="EYO87_08915"
     CDS             complement(741..974)
                     /locus_tag="EYO87_08915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66102.1"
                     /translation="MSDYLLLAGVALGLVSILLAVVQLVQATPPRAAVITLILGIVAI
                     FAAAYLNPEPFQAGDLARAWDRVATDAMTPPGK"
     gene            complement(1008..>1295)
                     /locus_tag="EYO87_08920"
     CDS             complement(1008..>1295)
                     /locus_tag="EYO87_08920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HIC66103.1"
                     /translation="ARERPRVPIIALTPLENVLRRMVLTWGMHCVITPRLTRFKEAVV
                     NATRAARDFGFADETRQVVVMAGVPFNVPGTTNIVRIAPCDERLIFASDPE"
BASE COUNT          218 a          406 c          420 g          251 t
ORIGIN      
        1 caaccccgat gtcaatggcg atgctccgat caaggcgctg cactggagtg ggcgtcagtt
       61 caactggaac ctgatgtgcg ccgaatgcct cgggctcgtg gatggccaga tcggccagaa
      121 ccttgcgatc cacctcgatc cccgccttcg ccagcaggtt gatgaaccgc gaataggtca
      181 tgtcggcatc ggccagacgg acggcggcat tgatccgctg gatccacagc gcgcggaagt
      241 tgcgcttgcg gttcttgcgg tcgcgggtgg catattggtt ggccttgtcc accgcctgcg
      301 tcgcggtgcg gaaattgcgc gaccggttgc cgtaatagcc cttggccttg tccagaacct
      361 tcttgtgacg ggcgtgggta accttgccgg atttaactcg tgccattgtt cagtcctcga
      421 cgatcagcgg ttatagggca tgtatttctt cacgatccgg gcatccgcgt cgctgaggac
      481 ggtggtgccg cgcgcatcgc gaatgaactt cgtggtgcgc ttgatcatgc cgtggcgctt
      541 gccggcctgg gcggatttca ccttgcccgt ggccgtcatc gagaaccgct tcttggcggc
      601 cgctttggtc ttcattttcg gcattttcat ctccttcgta tcagagtgaa cgcgcgactc
      661 ggcaatgcca ttccggccgg ccgcgcgggt cgaagcgcgc cctataacgg ggcgcgccag
      721 tcttggcaag agatgccggc ctatttgccc ggcggggtca tcgcatcggt cgcgacccga
      781 tcccaggcgc gggcgaggtc gccggcctgg aacggttcgg gattcagata ggccgcggcg
      841 aagatcgcga cgatgcccag gatcaacgtg atcacggcgg cgcgcggcgg cgtcgcctgg
      901 acaagctgca ccacggccag caggatcgag acaaggccca gcgcaacgcc ggccagcagc
      961 agataatcgg acatcgaaac cacccgttct tcttcgctgt tgcgggctta ttccggatcg
     1021 gaggcgaaga tcaagcgttc gtcgcaaggc gcgatgcgca cgatgttggt cgtgcccggc
     1081 acgttgaagg gcacgccggc catgaccacg acctgccgcg tctcatcggc gaagccgaaa
     1141 tcccgcgccg cgcgggtcgc gttcaccacc gcctccttga agcgggtcag acgcggcgtg
     1201 atcacgcaat gcatccccca ggtcaagacc atgcggcgca acacgttttc cagcggcgtc
     1261 agcgcgatga tcggcacgcg cgggcgttcg cgggc
//
LOCUS       DTVW01000676            2545 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1821271, whole
            genome shotgun sequence.
ACCESSION   DTVW01000676 DTVW01000000
VERSION     DTVW01000676.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2545)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2545)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2545
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1821271"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..409)
                     /locus_tag="EYO87_08925"
     CDS             complement(<1..409)
                     /locus_tag="EYO87_08925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009805268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HIC66104.1"
                     /translation="MRLTAFTDFGLRALMRIASEPERAFSTAEIADEFGISRHHLTKT
                     MAALANAGFLTTRRGAGGGAMLARPAAQIGLGEVVRVLERDQPLVECFRVDGGACVIT
                     PQCRLKTFLFAAEAAFLDRLDHFTLADCALDPRG"
     gene            556..960
                     /locus_tag="EYO87_08930"
     CDS             556..960
                     /locus_tag="EYO87_08930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018302954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="group III truncated hemoglobin"
                     /protein_id="HIC66105.1"
                     /translation="MDRTGLNDAVLTRLVHGFYDRIRRDALLGPIFAERITDWPPHLD
                     RMVDFWSSVALMTGRYHGSPMQAHLGLPVEQAHFDRWLDLFSQTARETCPPEGAAHVI
                     ERASRIAASIHGNIVDWRGGYGRSTPPSLRPA"
     gene            1103..1777
                     /locus_tag="EYO87_08935"
     CDS             1103..1777
                     /locus_tag="EYO87_08935"
                     /EC_number="6.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007674858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-formyltetrahydrofolate cyclo-ligase"
                     /protein_id="HIC66106.1"
                     /translation="MNRTPADGYASPPCFAHELETMQDGIAAVDPVQKRDVARWRKAE
                     RARFIDLRLGVSAAERARVAVAVGAELDRIVDHGPDTVISLYWPFRGELDLRGWMERA
                     CTQGSRAALPVVVAEGQPLAFREWRPDCRWERGVWNIPNPVGTDEVVPDILIAPVVGY
                     DRRLFRLGHGGGFFDRTLAALPSRPIFIGVGHPVAAIATIYPQPHDIPMDMVLTGAGD
                     MPKEER"
     gene            1774..2130
                     /locus_tag="EYO87_08940"
     CDS             1774..2130
                     /locus_tag="EYO87_08940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010393699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF488 domain-containing protein"
                     /protein_id="HIC66107.1"
                     /translation="MTQIWLRRAYEKPGPSDGQRILVDRIWPRGVSKEALELDDWMKD
                     IAPSDGLRDWFDHDPDKWQEFKRRYAGELDANHDLVAALRQRLESGRVTLVYGAKDDE
                     HNNAVALKAYLSAVET"
     gene            complement(2167..>2545)
                     /locus_tag="EYO87_08945"
     CDS             complement(2167..>2545)
                     /locus_tag="EYO87_08945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014873834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HIC66108.1"
                     /translation="STGPEMTDKVDRDGARRLVDLAVRAGVRRFVMLSSVGADNPDGD
                     SKLGHYLQAKHDADEHLISSGLEFAILRPVALTDDEGTRNMRFGDEVDVTGKAARGDV
                     AAVLADAVDNPEWTGKVLTMQSI"
BASE COUNT          474 a          808 c          810 g          453 t
ORIGIN      
        1 gaccgcgcgg atccagcgcg caatcggcca gggtgaaatg gtcgagccgg tccagaaacg
       61 cggcttcggc tgcgaaaaga aaggttttca gacggcattg cggcgtgatc acgcaggccc
      121 cgccatcgac ccgaaagcat tcgacaagcg gttgatcgcg ttccagaacc cgcaccacct
      181 cgcccagtcc gatctgcgcc gccggtcggg ccagcatcgc cccgcctccg gcaccacgtc
      241 tcgttgtcag aaaacccgca ttggccaacg ccgccatggt cttggtcagg tgatggcggg
      301 atatgccgaa ctcatcggcg atctcggcgg tcgaaaaggc gcgttccggt tcgctggcga
      361 tccgcatcag cgcccggagg ccgaaatcgg tgaaggcggt cagacgcatc agaaaatctc
      421 gtcggggttt acgtgggcgt gtcggctcta taaaacagca ttgaaaatgc ctattcaagt
      481 gtgaatgaca tgccccctcc cctagcgacg cccaaagcaa ccgtcaccct caggccagag
      541 atcacatcgg ccctgatgga ccggacaggg ctgaatgacg ctgttctgac ccgtctggtt
      601 cacggattct acgaccggat caggcgagac gcgcttctgg gtccgatctt cgccgaacgg
      661 atcaccgact ggccgccgca tctcgaccgg atggtcgatt tctggtcttc cgtggccctg
      721 atgacaggtc gctaccacgg ctctccgatg caggcgcatc ttgggctgcc ggtggagcaa
      781 gcacatttcg atcgctggct cgatctgttt tcacagaccg cccgcgaaac ctgtccgccg
      841 gaaggtgcgg cgcatgtgat cgagcgtgcc agccgcatcg ccgcatcgat tcacggtaat
      901 attgtggact ggcgcggcgg atacggccga tcgacgccac cgagcctgag gccggcatga
      961 tcggaattcc ggttccgccg gcggcgcccg gttcctgtct cgcgtcaacg tcagtcattg
     1021 atgcttgccg agacgatgcc tgtcacgccg ggatgaccct ttcggacggg ttgattttcg
     1081 accggcagca aggagcgagc cgatgaaccg aaccccggcg gatggatacg cctcgccacc
     1141 ctgcttcgcc cacgaactgg agaccatgca agacggcatt gcggccgtcg atccggttca
     1201 gaaacgcgac gtcgcccgct ggcgcaaggc cgagcgcgcg cgcttcatcg acctgcgcct
     1261 cggggtttcg gcggcagaaa gggccagggt tgccgtcgcg gtcggtgcag agcttgaccg
     1321 aatcgtcgat catggtcccg ataccgtcat cagcctctac tggccctttc gcggcgaact
     1381 cgatctgcgc ggctggatgg agcgggcctg cacgcaggga tcgcgcgccg cattgccggt
     1441 cgtcgtcgcc gagggccagc ccctggcgtt ccgcgaatgg cgacccgatt gccgctggga
     1501 acgcggcgtc tggaacattc cgaacccggt cggaacggac gaggtcgtgc cggacatcct
     1561 catcgcgccc gtggtcggct acgaccgcag gcttttccgg ctgggccatg gcggcgggtt
     1621 tttcgaccgg acactggcgg cattgccgtc caggccgata ttcatcggtg tgggtcatcc
     1681 cgttgccgcc atcgccacga tctatccgca gccccacgac attccgatgg acatggtgct
     1741 gaccggagcg ggcgatatgc cgaaggagga aagatgaccc aaatctggtt gagacgtgcc
     1801 tatgaaaagc ccggcccatc cgacggacag cggatcctcg tggatcgcat ctggccgcgc
     1861 ggcgtctcga aagaggcgct ggaactagat gactggatga aggacatcgc gccaagtgac
     1921 ggcctgcgcg actggttcga tcacgacccg gacaagtggc aggaattcaa gcgccgctat
     1981 gcgggcgaac tggatgcaaa ccacgatctt gtcgcagcgt tgcgccagcg actggaatcg
     2041 ggccgggtca cgctggttta tggcgcgaaa gatgacgaac acaacaacgc ggtggcgctg
     2101 aaagcctacc tgagcgccgt tgagacatag ccaagacatg ggccggtcgg cgccggatcg
     2161 ctgcgcctag atcgactgca tggtcagaac ctttccggtc cattccgggt tgtcaaccgc
     2221 gtcggccagg acggcggcga catcgcctcg tgcggccttg ccggtcacgt cgacttcatc
     2281 gccaaagcgc atgtttcgcg tgccctcgtc gtcggtcagc gcgaccgggc ggagaatggc
     2341 gaattcaagc cccgaagaga tcagatgctc gtcggcatcg tgcttggcct gaaggtagtg
     2401 tccaagcttg ctgtccccgt cgggattgtc ggcgccgacg gaactgagca tgacgaagcg
     2461 ccgcacgccc gcccggacag ccaggtccac cagacgcctg gcgccgtcgc gatcgacctt
     2521 gtcagtcatc tcgggtccgg tggaa
//
LOCUS       DTVW01000677            1320 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1825027, whole
            genome shotgun sequence.
ACCESSION   DTVW01000677 DTVW01000000
VERSION     DTVW01000677.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1320)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1320)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1320
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1825027"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..264
                     /locus_tag="EYO87_08950"
     CDS             <1..264
                     /locus_tag="EYO87_08950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011046037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome B"
                     /protein_id="HIC66109.1"
                     /translation="NPLGALMVYNIWATLLVIAATGYMMGTARFFGVDWVAQTHDLAY
                     DWLLISITAHVLGVVFDTWRSGVPLVQAMIHGRKRIPNDRPVE"
     gene            261..800
                     /locus_tag="EYO87_08955"
     CDS             261..800
                     /locus_tag="EYO87_08955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011046038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HIC66110.1"
                     /translation="MKNSLQRSRNDKRRAVTLAVIILLQALSAAFFFSDVVSDFKEET
                     YLSEAHFYMEAVASVVLIAGVIFLMIELRAVMSRMEELDRGLRGARGEMAQIIDAFFE
                     EWNLTPSEKDVGLLILKGFDNEAIAEFRGTATGTIRAQSTRIYSKAGVESRAQLFSVF
                     LEELLAGEDRLVEAKSEAR"
     gene            complement(803..1312)
                     /locus_tag="EYO87_08960"
     CDS             complement(803..1312)
                     /locus_tag="EYO87_08960"
                     /inference="COORDINATES: protein motif:HMM:PF01614.16"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66111.1"
                     /translation="MILSILTAGGEIRRLSKVVSRNPVRYDVHIDAAITPHCTASGRV
                     LLAYAPGKVVNAYFARVTMLGYTPRTETRPAVLRDLLHQVRRQGHAVNDGEFVTGSTG
                     IAIPLRGASGRVVAALNLGMPSTRYLGRERVLLAMLQEAGRKIQTALVTAATAQAASM
                     KQGNSGDDR"
BASE COUNT          256 a          385 c          410 g          269 t
ORIGIN      
        1 aacccgctgg gagccttgat ggtctataat atctgggcga cgctgctggt catcgcagcg
       61 accggctaca tgatggggac tgccaggttc ttcggtgtcg actgggtcgc gcagacacat
      121 gatctggcct atgattggct gttgatttca atcacggcac atgtccttgg cgttgtcttc
      181 gacacatggc gttcgggtgt cccgcttgtg caggcgatga tacacggccg caagcgcatc
      241 ccgaatgata gaccggtcga atgaaaaaca gtttgcagcg atccagaaac gacaaacggc
      301 gggcggtgac gctcgccgtg atcattctgt tgcaggcgct gagcgcggcg ttcttcttca
      361 gcgatgtcgt ctctgatttc aaggaagaaa cctatctcag cgaagcccat ttctacatgg
      421 aggcggttgc ttctgtcgtc ttgatcgccg gtgtcatctt tctgatgatc gaactgcggg
      481 cggtcatgag ccgcatggaa gaattggacc gcggcctgcg cggcgcgcgc ggcgagatgg
      541 cgcagatcat cgatgccttc ttcgaggaat ggaatctgac gccatcggaa aaggatgtgg
      601 gactgctcat tctcaagggg ttcgacaatg aggcgatagc agagtttcgc ggcaccgcga
      661 ccggaaccat ccgggcgcaa tcgacgcgca tctattcgaa ggcaggcgtg gaaagccgcg
      721 cacaattgtt cagcgtcttt cttgaagaac ttctggccgg agaggatcgc ctggtcgaag
      781 cgaaatcaga ggcccgatag cctcagcgat catcacctga atttccctgc ttcatggatg
      841 cggcctgcgc cgtcgcggct gtgaccagcg ctgtctgaat ctttcggccg gcctcctgca
      901 acatcgccaa gagaacgcgc tcgcggccca ggtatcgcgt gctgggcatt cccaggttca
      961 gcgcggcaac taccctgccg ctcgcgccgc gaaggggaat ggcgatgccg gtcgatccgg
     1021 tgacgaactc gccatcattc acggcatgac cctgccgccg gacctgatgc agcaaatcgc
     1081 gcaggacggc cggccgggtt tcggtgcgcg gcgtatagcc gagcatggtc acccgcgcga
     1141 aataggcgtt cacgaccttg cccggcgcat aggccagcag cacgcggccg ctggcggtgc
     1201 aatggggcgt gatcgccgcg tcgatatgga catcatagcg caccggattg cggctcacga
     1261 ctttcgacag ccgcctgatt tcgccgcccg ccgtcaggat cgacaggatc accgtctcgt
//
LOCUS       DTVW01000678            7784 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1829035, whole
            genome shotgun sequence.
ACCESSION   DTVW01000678 DTVW01000000
VERSION     DTVW01000678.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 7784)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7784)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7784
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1829035"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(167..247)
                     /locus_tag="EYO87_08965"
                     /pseudo
     CDS             complement(167..247)
                     /locus_tag="EYO87_08965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009503103.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase"
     gene            complement(562..1314)
                     /locus_tag="EYO87_08970"
     CDS             complement(562..1314)
                     /locus_tag="EYO87_08970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009803507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HIC66112.1"
                     /translation="MSLHLISHALCPYVQRAAISLTEKGVTFERTDIDLSNKPDWFLA
                     ISPLGKTPVLVVDGTPIFESAVILEYLEDTQPHALHPHDALDRARHRAWIEFGSAVLN
                     DIAGFYSAPNDKALEAKVAALRAKFLRLDAELGEGPWFDGHQFSLVDVVFGPVFRYFD
                     VFDAIGEFGVFTGLARVRAWRYELERRVSVKSAVSEDYPTLLRDFIRRRNSYLSQIMQ
                     TGGPKKTVTQVQSADRRSLDIVLSGRSAEPDV"
     gene            complement(1311..1745)
                     /locus_tag="EYO87_08975"
     CDS             complement(1311..1745)
                     /locus_tag="EYO87_08975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004115066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HIC66113.1"
                     /translation="MSQSHLTEFGIFLLRIALGIMFLAHSLFLKLFIFTLPGTAQFFI
                     SIGLPGWFAYMVFAVEAIAGALLVLGVQARWVASATVPILAGATWAHSGNGWMFGYEN
                     GGWEYPAYLTLLAIVQGLLGDGRFALSPSFAPGNVQMAGETT"
     gene            1844..2272
                     /locus_tag="EYO87_08980"
     CDS             1844..2272
                     /locus_tag="EYO87_08980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011048952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HIC66114.1"
                     /translation="MNEIDHATEAAWTALMTKSRVLLEAVESSLKSAGYPPLAWYDAL
                     LELEKAGPDGLRPFELKDRILLPQYGTSRLLDRMVKAGLVDRRNCSEDGRGQNISISE
                     KGKSVRRAMWPIYERVLSERIGAKLKPKDAAQLATLLSRL"
     gene            complement(2360..2593)
                     /locus_tag="EYO87_08985"
                     /pseudo
     CDS             complement(2360..2593)
                     /locus_tag="EYO87_08985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009803504.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
     gene            2755..3956
                     /locus_tag="EYO87_08990"
                     /pseudo
     CDS             2755..3956
                     /locus_tag="EYO87_08990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007792467.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS256 family transposase"
     gene            complement(4021..4293)
                     /locus_tag="EYO87_08995"
                     /pseudo
     CDS             complement(4021..4293)
                     /locus_tag="EYO87_08995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009803504.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
     gene            complement(4599..5054)
                     /locus_tag="EYO87_09000"
     CDS             complement(4599..5054)
                     /locus_tag="EYO87_09000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009803503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PaaI family thioesterase"
                     /protein_id="HIC66115.1"
                     /translation="MTQFKPKNPDYDARVRNSFDRQKVMNTLGISIAELLPGRIVLEM
                     AHQVALTQQHGFLHAGIVSTALDSACGYAAFSLMPADAAVLTAEFKINLLNPADGERF
                     RFVADVVKPGRTLTICEARAYAVKGQDEKLVATMTGTLMALIGRAGVAD"
     gene            complement(5076..5801)
                     /locus_tag="EYO87_09005"
     CDS             complement(5076..5801)
                     /locus_tag="EYO87_09005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009503104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HIC66116.1"
                     /translation="MLSSSNLMAAPLYLELAPPEEAAKQIDHLFVFRDTGVLSGGGRG
                     RFATDLFTLSVTRDDSGGGRVSLAEPRPYFSPRPRPFQGVVAGLRLSSRPQRFPDSKG
                     LDMLASELARIQTGDDDLPALIAVLDGLARDLSFAAPTGAYSDRTKRRKVRAETGVSR
                     RRLATLRRFRRALGQLASKTLPLSDLALDAGYYDQSHLSAACRIFAGKPPGALRALSI
                     PRRFDLSLQDTRLKDRLRLVIDE"
     gene            complement(5785..6639)
                     /locus_tag="EYO87_09010"
     CDS             complement(5785..6639)
                     /locus_tag="EYO87_09010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009503105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HIC66117.1"
                     /translation="MITVFGATGTTGAPLVDTLLAKGATVRAVTSDLSKLDALKAKGC
                     EAVVADFTDPAALARACDGAEKIYLVTPAHLNMRQWKANVIEAAKAAGVRHIVVATGL
                     GASPKAGLTFGKWHSETQELLKQSGLDWTFVQPTYFMQNLLWQAGNIAKDAVYYDDLG
                     GPVAWIDARDIADVAAEALTAPGYEGKALGLTGPEALTGEDIAALLSRVTGRTVTCAP
                     LSAENAKAGMVAGGMQDEVARAMVELASIAPKGYLAGIETTVSDVMGRPARRFADFVA
                     ENRDAFVK"
     gene            complement(6636..>7784)
                     /locus_tag="EYO87_09015"
     CDS             complement(6636..>7784)
                     /locus_tag="EYO87_09015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009803500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-dependent synthetase"
                     /protein_id="HIC66118.1"
                     /translation="SGTTGRPKGVVHTHLGVQAKATADFLLCLDMKRDDRHLWMTDMG
                     WVMGPLTLLSVLLSGSTLVLAEGAPSMPGDPFRLLRLASEMEVTHLGVAPTLVRQFMT
                     QDTESLSGYDLSSLRIVASTGEPWTEDAWLWQLDHICRRRAVPLNISGGTELFGAILT
                     STVLHELKPGGFSAQALGVGAKVLRQDGSEAAPGEVGELVVTQPPLGLTPAIRGDRDR
                     YLDTYWSTFPGLWRHGDWVRCDPDGTWYILGRSDDTLNIAGKRIGPPEIEAALTETGE
                     VVDAAAIAAPDDIKGVAVVCVCVAAPNVSPDAELVNRLKDRVGEIVSKPFRPREIHFV
                     EALPKTRSMKTMRRVVRAAFLGEDPGDLSSISNPETIQPIADLQKEKS"
BASE COUNT         1567 a         2369 c         2369 g         1479 t
ORIGIN      
        1 ccgaagcgct gatgaatttg tgccgcgaca acctcgcagg ctacaaacgg ccgcgcgaaa
       61 ttcgcttcat cgcgttcgag gattttccca gatcgaccag cggaaaggtc cagcggcatg
      121 tcctagaagc gcggctcgca gattaatttt tgctccgacc cgatcgtcac cccgccacgc
      181 ccgttcgccc cactagcgaa ataagcgttc ctgtcatcgt tgcgacgagc ttctcatccc
      241 cgccctttgg agtagccccc tgaaagtggt ccaccaaccg ggatagattg acccgcgatt
      301 gacgtgctgc cctctgtcgg accacacggc tggagttttc ccgggggttt gagctcaggc
      361 ggattcttcg atccctgagc cattcatcag cgcgatcggt ggtttgttcc cggttgcgct
      421 gtgggggcag caggtcaccc ggcgcttcgc acggacgggc atggaatgcc ggcaagtgcc
      481 ggttggggct gctgcgggcc ttcaagggaa agtcggcgac tatccgatgt gcgggacaga
      541 gcgggtattc accaagcgaa ctcaaacgtc cggttctgca ctgcggcccg acagaacgat
      601 atcaagtgat cggcgatcag ccgattgcac ctgtgtaaca gtcttcttcg gccctcctgt
      661 ctgcatgatc tgggacaggt aagaattgcg ccgtctgatg aagtcacgca gaagagtcgg
      721 gtagtcttca ctgacggcac tcttcacaga aacccgacgc tccagttcat atcgccaggc
      781 ccttacacgg gcaagccctg tgaagacgcc aaactctccg atggcgtcaa aaacgtcgaa
      841 atagcggaag accgggccga atacgacatc gacgaggctg aactggtggc cgtcgaacca
      901 tggtccctcc ccaagctccg cgtccagccg aaggaatttt gcgcggagcg ccgcgacttt
      961 tgcttccaac gctttatcgt tcggcgccga gtagaacccc gcaatgtcgt tcaagacagc
     1021 agatccaaat tcaatccagg cacggtggcg ggcgcgatcg agagcgtcgt gcggatgaag
     1081 tgcgtggggt tgtgtatcct caagatattc gaggataacc gcagattcga aaatcggcgt
     1141 cccgtccaca accaggacag gcgtcttgcc cagcggagat atggcaagaa accagtcggg
     1201 cttgttcgaa agatcgatgt cagttctctc gaacgtgaca cctttctcag tgagcgagat
     1261 cgccgcgcgc tgcacatatg ggcagagcgc atggctaatg aggtggaggc tcatgttgtc
     1321 tctcccgcca tctgcacgtt accgggcgcg aaggaagggc tgagggcgaa acggccgtcg
     1381 cccagaagcc cttgcacgat ggcaagcagc gtcagatagg ccgggtattc ccacccgccg
     1441 ttctcgtatc cgaacatcca gccgtttccg gagtgagccc aggtcgcacc ggccaggatg
     1501 ggcacggtcg ccgatgcgac ccaccgagcc tgtacgccga ggaccaaaag ggcaccggca
     1561 atcgcctcga ctgcaaagac catataagca aaccagccgg gcagcccgat cgaaatgaag
     1621 aactgcgccg ttccgggaag tgtgaaaatg aagagcttga gaaacaggct gtgcgccagg
     1681 aacatgatcc cgagtgctat acggagcagg aatatcccaa attctgtgag gtgcgattgt
     1741 gacatgatat gatcccatat gtcgatgcat ttgcatctat atatagcgcg tcacatgcga
     1801 cgtcaaggtt gatgcactta catgtatatg atatgtgctg gatatgaacg agattgacca
     1861 tgctactgag gccgcctgga cagccctcat gactaaaagc cgcgttttgc ttgaggctgt
     1921 cgaatcgtct ctgaaatcgg caggataccc gccacttgca tggtatgacg cgcttctcga
     1981 actcgagaag gcaggcccgg acggactccg tccattcgaa ctcaaagacc ggattttgtt
     2041 accccaatac ggtacatcgc ggttgctgga ccgcatggtg aaagcagggc tggtggaccg
     2101 acggaactgc tcggaagatg ggcgaggtca aaacatttct atctctgaaa agggtaaatc
     2161 tgtcaggagg gcgatgtggc cgatctatga acgggttctg tcggaaagga tcggcgcaaa
     2221 gctgaaaccc aaagacgccg ctcaattggc cacgctactc tcaaggctct gaagtctcgg
     2281 tcgactgacg cgaaacctgt ctgtgacttt ccacgctaag tggccctgat ttttttcacg
     2341 ttaattggcc gacagttgcc tatgtcggtg tgcgaagggt gtttcgggct gttccgacgt
     2401 cctttcgcat ccaacagact tctgcgtgat cgttgataaa tcccatggcc tgcatgaatg
     2461 catatacggt ggtcggtccc acgaatttga agccaagctt tcgtagatct ttggacaggg
     2521 tctcggacgc tggtgatttg gaccgcattt gtggcagtgc gtcgtccttg gcaggttcat
     2581 atagccagat gaatgggtca cgtcccttgg agaggtgtaa ctctgggtcg cgcccttgat
     2641 ggcgtccgcg ttccgcatga ggcgctgtag gacggcatca agggcgcggt ggtcatcgga
     2701 aaattttcgg tagggtcggg ttgctgaacc aacctgaacc gaaggaagac cccgatgacc
     2761 aaacccatga tggacctgcg agagcttgtg gagaagagcg cagacgccga tcttcttcga
     2821 gatatgatcg gttttgccgc cgagcggctg atggaactcg aggttggcgc gaagacaggc
     2881 gccgactatg gcgagaagaa tccggcacgg cttgtgcagc ggaacggtta ccgagatcgg
     2941 gactggcaga cgcgggccgg gaacgtggag ttgcgcatcc caaagctgcg cagcggcagc
     3001 tatttcccgt cctttctcga gccgcgccgg gccaccgaga aggccctgac ggcggtcatt
     3061 caggaggcct atgtccacgg cgtctcgacc cgatccatgg acgatctggt ccaggcgatg
     3121 ggcgggaccg gcatctcgaa gagccaggtc agccgcctgt gcgaggaaat cgacgaacgc
     3181 gtcgatactt ttctcacccg cccgatcgag ggcgaatggc cctacctctg gatcgacgcc
     3241 acctatctca aggtccgaca gggcggtcgt atcgtctccg tcgccgtgac cattgccgtc
     3301 ggcgtcaaca cggacgggcg ccgcgaggtg ctgggcatgt ccatcgggcc gtccgaggcc
     3361 gagacgttct ggaccgattt cctgcgcgac ctggtgcgcc gcggactgaa cggggtgaag
     3421 ctggtgatca gcgacgcaca cgaggggatc aaggctgcca cggcgcgtgt cctgtccacc
     3481 acctggcagc gctgccgcgt gcatttccag cgaaatgcgc tcgcccatgc cggcaagagc
     3541 agccgtcgcg tcatatcagc cttcatcgcc accgccttcg cccagccgga ccatgcggcg
     3601 gccaagaccc aatggcgaaa cgtcgccgac cagatgcggg gcaagctgcc caagctcgcg
     3661 accctcatgg atggcgccga ggaggacgtg ctggcctaca tgaccttccc ccagcaacac
     3721 cgggcgaagt tacactcgac caatccgatc gaacgtctga acggcgagat caagcggcgc
     3781 accgatgtcg tcgggatctt tcccaatgaa gcctcgatcc ggcgtctcgt cggcgcgatc
     3841 ctgatggagc agactgagga atgggccgtc cagcgctctc gctacatgac actggaaacc
     3901 ttgggcccgt ctgcgatgat cccatcgtca gcctgcctgc cgcgcagacg gactgaccag
     3961 ctcggcgcgc cgaaaaccag ctggccagcc ttgagctaca ccaccaattg ggacgtgatc
     4021 gatgaatgcg gcgaaggagc cttcctcttg gacgacctcg aaagtacggc gagcgttgtt
     4081 gatcacggct tcgatcttgc ctcgatagcg aacaattcct tcatcggcaa gtaggcgctc
     4141 aatgtcgttg tcgtcaaagt tcgcaactcc ccgaaagtcg aacccggcga aggcagcacg
     4201 aaagttctcg cgcttggcca gaatggtgcg ccagctcagc cctgactgga aactccggcg
     4261 tgacggcagc ccatcggcac cgtgggcgtc catccgttcc aattacggtt gcagcatcag
     4321 gccgctgccg cataaacttg aacagaaacc gaaccagatc ctccgttacg atacagtctc
     4381 agctctccga aaaaccctga cgacggacaa tcggcgaccg cactgctaaa agctaacatt
     4441 accgcttgac aggtctgaac ctgctggcgg cgatctggat accgcgcgcg cctacgggaa
     4501 acggttggcc gaggtcgcga gccgctggaa cagctgatcc agctgtctga ataatcggcc
     4561 cgaccgcccg gatcggatgt gctgcggccg ggttgcgctc agtccgcgac ccccgcccgc
     4621 ccgatcagcg ccatgagcgt tccggtcatc gttgcgacga gcttttcatc ctggcccttc
     4681 acggcatagg cacgcgcctc gcatatggtc agcgtcctgc ctggtttcac cacgtcagcg
     4741 acgaagcgaa accgttcgcc gtccgccggg ttgagtaggt tgatcttgaa ttcggccgtc
     4801 aacactgccg cgtccgctgg catcagcgaa aaggccgcgt atccgcaggc gctgtccagc
     4861 gctgtcgaca cgattccggc atgcaaaaac ccatgctgct gggtcagtgc aacctgatgt
     4921 gccatttcca gaacgatgcg gccgggtaac aactcggcaa tgctgatccc caacgtgttc
     4981 atcaccttct ggcgatcgaa actgttgcgc acgcgtgcgt catagtcggg gtttttcggt
     5041 ttgaattgtg tcatggcggg tcttcctctt cgatttcatt cgtcaatgac caatcttagg
     5101 cggtctttga ggcgcgtatc ttgtagcgaa aggtcaaaac gacgcggaat agacagagcg
     5161 cgcaacgcgc cgggcggttt gccggcgaag atccggcaag cggcggacaa gtgagattga
     5221 tcgtaatatc cggcgtccag cgccagatcg ctcagcggca gggtctttga cgcaagctgc
     5281 ccgagagccc ggcgaaagcg tcgcaaggtc gcaagccgcc gccgcgacac gccggtttcc
     5341 gcccgcacct ttcgacgttt ggtccggtcg ctgtaagctc cggttggtgc ggcaaagctc
     5401 aggtctctcg caaggccgtc aagcaccgcg atgagcgcag gcaggtcatc gtccccggtc
     5461 tgaatccggg ccagttctga ggccagcatg tccagccctt tggagtcggg aaatcgctgc
     5521 ggtcgtgacg acagtcgcag cccggccacg acaccctgga atggccttgg gcggggcgaa
     5581 aaataggggc gcggttctgc cagcgatacg cgcccgccgc cgctgtcgtc gcgcgttacc
     5641 gaaagggtaa agaggtcggt tgcgaaccgc ccgcgtccac caccgctcag cacaccggta
     5701 tcgcggaaca cgaacaaatg gtcgatctgt ttggccgctt cctcaggcgg cgccagttcg
     5761 agataaagcg gcgccgccat caggttactt gacgaaagca tcccggttct cggcgacgaa
     5821 atcggcaaat cggcgcgccg ggcgtcccat cacatcgctg accgtggtct cgatgccggc
     5881 aaggtagccc ttgggcgcga tggaagccaa ttcgaccatg gctctggcga cctcgtcctg
     5941 cattccgcca gccaccatgc ccgccttggc attttcggcc gacaggggtg cgcaggtgac
     6001 agtgcgcccg gtcaccctgg acaggagggc ggcgatatct tctccggtaa gagcttcggg
     6061 cccggtcaga ccaagagcct tgccttcgta acccggagcg gtcagcgcct cggcggcgac
     6121 atccgcgatg tcgcgggcgt cgatccaggc cacggggccg cccagatcgt catagtacac
     6181 ggcgtccttt gcaatgttac cggcctgcca cagcaggttc tgcatgaaat aggtcggctg
     6241 gacaaaggtc cagtcaaggc cgctttgctt cagcagctcc tgggtttcgg aatgccactt
     6301 tccaaaggtc agccccgcct tgggcgacgc gccaagcccc gtggccacaa cgatatggcg
     6361 cacgcccgcg gccttggccg cctcgatcac gttcgccttc cactggcgca tgttcagatg
     6421 ggcaggcgtg accaggtata tcttttctgc cccgtcacag gcccgcgcca gcgcggcagg
     6481 gtccgtgaaa tccgcgacga ccgcctcgca tcctttggcc tttagcgcgt ctaactttga
     6541 gaggtcgctg gtgacagcgc gcacggtcgc gccttttgcc agaagcgtgt cgacgagggg
     6601 cgcaccagtc gtgcccgtgg ctccgaaaac agtgatcatg acttttcctt ttgcaggtct
     6661 gcgatgggct gaatggtttc cgggttgctg atcgacgaca gatcgcctgg atcttcaccg
     6721 agaaaggcgg cgcgcacgac acggcgcatg gttttcatgc tgcgggtctt gggcagcgct
     6781 tcgacaaagt ggatctcgcg cgggcggaag ggtttcgaga cgatctcccc gacacgatcc
     6841 ttgagccggt tcacgagctc cgcgtccggc gacacatttg gtgccgccac gcagacgcag
     6901 acgacagcca cgcccttgat gtcatcaggt gccgcgatgg ccgcggcgtc caccacctct
     6961 ccggtttcgg tcagggccgc ctcgatctcg ggcgggccga tgcgtttgcc ggcgatgttc
     7021 agcgtgtcgt ccgaccggcc caggatatac catgtcccgt ccggatcgca gcgcacccag
     7081 tcgccgtgcc gccagaggcc ggggaaggtg gaccagtagg tgtcaaggta gcgatcgcgg
     7141 tcccccctga tggccggggt cagacccaga ggcggctggg tcacgaccag ttcgccgacc
     7201 tcgcccggtg cggcttcgct gccgtcctgg cgcagaacct tggccccgac acccagggcc
     7261 tgggccgaaa atccgccggg cttgagctcg tgcagcacgg tcgaggtcag gatcgcgcca
     7321 aaaagctcgg tcccgcccga gatgttcagc ggcacggcgc ggcggcgaca gatatgatcg
     7381 agctgccaga gccaggcatc ctcggtccag ggctcgccgg tcgaggcgac gatgcgcagg
     7441 gacgacaagt cgtagcccga caaagattca gtatcctgcg tcatgaactg ccgtaccagg
     7501 gtcggggcca cgccgagatg cgtgacctcc atctcggacg caagacgcag cagcctgaag
     7561 ggatcgccgg gcattgatgg tgcgccctcg gccagcacca gagtcgaacc ggacaagagc
     7621 accgataaaa gggtgagcgg tcccatgacc caccccatgt cggtcatcca gaggtgccgg
     7681 tcatcccgtt tcatgtcgag gcaaagcagg aaatcggccg tggccttggc ctgcacgccc
     7741 aaatgggtat gcacgacacc cttgggccgc ccggtggtgc ccga
//
LOCUS       DTVW01000679            1127 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1830811, whole
            genome shotgun sequence.
ACCESSION   DTVW01000679 DTVW01000000
VERSION     DTVW01000679.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1127)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1127)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1127
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1830811"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(776..>1127)
                     /locus_tag="EYO87_09020"
     CDS             complement(776..>1127)
                     /locus_tag="EYO87_09020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007010012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF2189 domain-containing protein"
                     /protein_id="HIC66119.1"
                     /translation="TPTGWALLLTGSAVGALFAAFAFAISVFAVPMLLTERTDALSAM
                     GISMAMVWANLPVMLAWGAIVLGLFLVSIATAFVGLIVVFPMLGHATWHAYRAIRPVD
                     RQQGDAERMFIRPA"
BASE COUNT          194 a          381 c          389 g          163 t
ORIGIN      
        1 ccgtctgggc gcgcggcgag cgcgatatcg gcggcgttct gccgctgatc gtgctgacga
       61 attgcgacga ggtggaattg tcccatgccc gcgtgaccag gcgtgtcagc cccgaccgcg
      121 agcggttccc gcatctgccc cacccgccgg tgatcatcga ccaccgccat ttctcggccg
      181 aggaactggg cgattggggc gaaagctggc attcgggcct tttgcgcggc tatcgcgacg
      241 gcgagctggt ggccgaacgt cactttcccg caggagcggt gttcgaccgg ctggttctgg
      301 ccgcggacgt gaccgaagcc gccgccgatc ccagcgacga gatccgggtg atcgtccgcg
      361 cgctggatca ggctggcaac cggctgcatt tcctgaacga gccggtcttt ctggacctcg
      421 ccggtccggc ccggttgatc ggtccggcct gcccggtgct gcaaggcggc agcaccggct
      481 gctggctgcg cccgactggc gagaccggca ccatccggct tgacgcaagg ctgcgagaca
      541 agacggcctc ggtccttgtc acgctgcgct aggcgaatcg gccccgaccg gccagcgatc
      601 ggcagggctg ccgagcgcaa tctgcggccg ggccggcggg cgggcacgcg acgagatcgc
      661 gtgaagccgg cctgatgccg tcggggccgg acaccggcgc aggcagcgat agccatcgtt
      721 ttcgccgcac tgaaacgcaa ggcccgtccg tgcagatcgg cagaccatga tcccgctagg
      781 ccggacggat gaacatgcgt tcggcatcgc cctgctggcg atcaacggga cggatggcgc
      841 ggtaggcgtg ccatgtcgcg tgaccaagca tcggaaagac cacgatcagt cccacgaacg
      901 ccgttgcgat cgagaccagg aaaagcccca gcacgatcgc gccccaggcc aacatgacgg
      961 gcaggttggc ccagaccatc gccatggaaa tgcccatggc cgacagcgcg tccgtgcgtt
     1021 cggtcagcag catcggcacg gcgaagacgc tgatcgcgaa ggcgaaggcc gcgaaaagcg
     1081 cgccgacagc actgcccgtc agaagcagcg cccagcccgt cggggtc
//
LOCUS       DTVW01000680            2791 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1834539, whole
            genome shotgun sequence.
ACCESSION   DTVW01000680 DTVW01000000
VERSION     DTVW01000680.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2791)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2791)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2791
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1834539"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..224)
                     /locus_tag="EYO87_09025"
     CDS             complement(<1..224)
                     /locus_tag="EYO87_09025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018437736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-galactonate dehydratase"
                     /protein_id="HIC66120.1"
                     /translation="MKITTIETFIVPPRWCFVKICTDEGISGWGEPVLEGRAATVAAC
                     VEELSDYLIGRDPGHIQDHWTVMYRGGFYRG"
     gene            complement(221..1213)
                     /locus_tag="EYO87_09030"
     CDS             complement(221..1213)
                     /locus_tag="EYO87_09030"
                     /inference="COORDINATES: protein motif:HMM:PF01263.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose mutarotase"
                     /protein_id="HIC66121.1"
                     /translation="MRSSVADAASSHPSTRPGMAEPACTIALPSGLSATILPHGATLA
                     SLRVPGPDGHPGEVLIGPPRPADHRGERLFRGSSIGRYANRIGGAGFMLDGRQVRLDA
                     NEGANTLHGGAEGFDRRDWQVLDRGPRSVVLGLDSPDGDQGFPGALQARADFALDDPG
                     SLTVTYRATVTAPCPVSLTSHGFFNLAGGGPVRDHRLRVAAKRYLPVDAALIPKGPAR
                     PVAGTRFDFRDFRPLPGPDEPGLDHCLCLDHGPGLRPVAWLEDRASGRAMRLSTDQPG
                     LQVFLARLPAAEALCLEPQAWPDAPNRNDFPDAILRPGQIYTNTIRLDFTARLS"
     gene            complement(1152..2084)
                     /locus_tag="EYO87_09035"
     CDS             complement(1152..2084)
                     /locus_tag="EYO87_09035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007255162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HIC66122.1"
                     /translation="MSLAIGLVGLGAIARAQHLPAIAATGGVHLAAIASRNASLPDCP
                     SYPDLAAMLAAEPGLAAVSLCTPPQGRFDQAMQVLRAGRHLMLEKPPAATLTEAEILR
                     DEAGRRGLTIFATWHSREGRAVDAARRWLSVRKVRQVRIDWREDVRKWHPGQDWIWQP
                     GGLGVFDPGINALSLLTTLMADPVILRAAGLDIPEGRQTPIAAQLALSAGAVAIDAEF
                     DWREQGGETWQIGFETTNGTACLRDGGAVFEADGKPAIGGEDVEYRRLYEGFRDLVAA
                     GRSAVDLAPLRLVADAFLCGRRRLVAPFDETGHG"
     gene            complement(2084..>2791)
                     /locus_tag="EYO87_09040"
     CDS             complement(2084..>2791)
                     /locus_tag="EYO87_09040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008560301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HIC66123.1"
                     /translation="AAQILKLEPLLDRKPAALSGGQRQRVAIGRAITRGPEVFLFDEP
                     LSNLDAELRVEMRAEIARLHREIGATMIYVTHDQVEAMTMADKIVVLRAGNIEQVGRP
                     MDLYDDPDNRFVAGFIGSPSMNFMEGRVEDGEIAIPTMRRSIPSPVALPAEGTAVTVG
                     LRPEFLKIDGGDSLSVDMVEALGGVSYVHASAENGEKLVIEDRDKVAVRIGDAIGAGF
                     DPACALIFDAQTGQRLR"
BASE COUNT          452 a          967 c          969 g          403 t
ORIGIN      
        1 ccgcgataga agccgccgcg atacatcacc gtccagtggt cttggatatg gcccggatcg
       61 cggccgatca gatagtcgga caattcctcg acgcaggcgg cgacggtggc ggcgcggcct
      121 tccagcaccg gttcgcccca gcccgaaatc ccttcatcgg tgcagatctt cacaaagcac
      181 cagcgcggcg gcacgatgaa tgtctcgatg gtggtgattt tcatgaaagc ctcgcggtga
      241 aatccagccg gatggtgttg gtatagatct gtcccggccg caggatggcg tcgggaaagt
      301 cgttgcggtt gggcgcgtcg ggccaggcct gcggctccag gcacagggcc tcggcggcgg
      361 gcaatcgggc cagaaagacc tgcaagcccg gctggtcggt cgaaagccgc atcgcccgcc
      421 ccgaggcgcg atcctccagc cacgccaccg ggcgcaggcc cggcccgtga tcgaggcaga
      481 ggcaatggtc caggcccggc tcgtccggtc cgggcagcgg gcgaaaatcg cgaaagtcga
      541 agcgggtgcc cgcgacgggc cgggccgggc ctttggggat cagcgccgca tccacgggca
      601 gatagcgttt ggcggcgacg cgcagccggt ggtcccggac cggcccgccg cccgcgaggt
      661 tgaagaaccc gtgcgaggtc agcgaaaccg ggcagggggc ggtgaccgtc gcgcgatagg
      721 tcaccgtcag gctgccggga tcgtccagcg caaagtccgc ccgtgcctgc aacgcgcccg
      781 gaaagccctg atcgccgtcc gggctgtcga gacccagaac gaccgagcgc gggccgcgat
      841 ccaggacctg ccagtcgcgc cggtcgaaac cctcggcgcc gccatgcagc gtattcgcgc
      901 cctcgttcgc gtccagccta acctgccggc cgtccagcat gaagccggcg ccgccgatgc
      961 gattggcata gcggccgatg ctgctgcccc ggaacaggcg ttccccgcgg tgatcggccg
     1021 gccggggtgg gccgatcagc acctcgccgg gatggccgtc cgggcccgga acgcgcaggc
     1081 tggccagcgt cgcgccatgg ggcaggatcg tggcggaaag gcccgagggc aacgcaatgg
     1141 tgcaggccgg ttcagccatg cccggtctcg tcgaagggtg cgacgaggcg gcgtctgcca
     1201 cagaggaacg catccgcgac cagccgcagc ggagccagat cgaccgcgct tctgccagcg
     1261 gcgacaaggt cgcgaaagcc ctcgtagagc cggcgatatt ccacgtcctc gccgccgatg
     1321 gccggctttc cgtcggcctc gaagaccgcg ccgccgtcac gcaggcaggc ggtgccgttc
     1381 gtggtctcga agccgatctg ccaggtttcc ccgccttgtt cgcgccagtc gaactcggca
     1441 tcgatcgcaa ccgctccggc ggacagcgca agctgcgccg cgatcggggt ctggcggccc
     1501 tcgggaatgt ccaggccggc cgcgcgcagg atcaccgggt ctgccatcaa cgtcgtcagc
     1561 agcgacagcg cgttgatgcc gggatcgaag acgcccagcc cccccggctg ccagatccag
     1621 tcctgaccgg gatgccattt gcgcacatcc tctcgccagt cgatgcggac ctgccgcacc
     1681 ttgcggaccg acagccagcg gcgcgcggcg tccaccgcac gaccctcgcg gctgtgccag
     1741 gtggcgaaga tcgtcagccc gcgccgtccg gcctcgtcgc gcaggatctc ggcctcggtc
     1801 agggtcgcgg cagggggttt ttccagcatc agatgccgcc ccgcgcgcag gacctgcatc
     1861 gcctgatcga accgtccctg tggcggcgtg cacaacgaca ccgccgcaag gccgggttcg
     1921 gccgccagca tcgcggccag atcggggtag gaggggcaat ccggcaggct ggcgttgcgg
     1981 ctggcgatgg cggccagatg cacgccgccg gtcgcggcga tggcgggcag gtgctgggca
     2041 cgggcaatgg cgcccagtcc gacaagaccg atggccagcg acatcagcgc agccgctgac
     2101 cggtctgggc atcgaagatc agcgcgcagg cgggatcgaa gcccgcgccg atcgcgtcgc
     2161 cgatccggac ggcgaccttg tcgcgatcct cgatgaccag tttttcgccg ttctcggccg
     2221 aggcatggac gtaggagacg ccgccaagcg cctcgaccat gtcgacgctc aggctgtcgc
     2281 cgccgtcgat cttcaggaat tccgggcgca ggccgaccgt taccgcggtc ccctcggccg
     2341 gcagagcgac agggctgggg atgctgcggc gcatggtcgg gatcgcgatc tcgccgtcct
     2401 cgacccgccc ttccatgaaa ttcatcgagg gcgagccgat gaaacccgcc acgaagcggt
     2461 tgtcgggatc atcatacagg tccatcggcc ggccgacctg ttcgatattg cccgcgcgca
     2521 ggacgacgat cttgtcggcc atcgtcatcg cctcgacctg gtcatgggtg acatagatca
     2581 tcgtcgcgcc gatctcgcgg tgcaggcggg cgatctcggc ccgcatctcg acgcgcaatt
     2641 cggcatccag gttcgacagc ggctcgtcga acaggaacac ctcggggccg cgggtgatgg
     2701 cccggccgat ggcgacgcgc tgacgctggc cacccgacaa ggccgcaggc ttgcgatcca
     2761 gcagcggttc cagcttcagg atctgcgccg c
//
LOCUS       DTVW01000681            2636 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1835794, whole
            genome shotgun sequence.
ACCESSION   DTVW01000681 DTVW01000000
VERSION     DTVW01000681.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2636)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2636)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2636
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1835794"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..2524)
                     /locus_tag="EYO87_09045"
     CDS             complement(<1..2524)
                     /locus_tag="EYO87_09045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66124.1"
                     /translation="MRIGAEQGLDHADLREALERTEFQEQSILERWGTICNDAAPAAP
                     VLWTFNDEPLGPSESGWRLKGVAWPDPGGTERSEPADDILEVRETWRTGDRDLDRARG
                     IVPAIVQGGKVRCLPRQDGNTGAGGNRRLADAMLTGPLADLIRAGRDRILVPPLAETA
                     SRATSLGTGAAPGRFPDRLAAETARLNAATEGSTGKRRNDRLDVPRLTLSQVVQNLAQ
                     GSAVHRASLAASLTDNGDGGSNPDGPNCDGRVLASPLWDTGQPVVFGDRSKSESIAAE
                     LDLIGHKHGPLSDVIDLATGEIAEGVILMWANERLLNRESGRGRNLTIHYLDRDGAVL
                     DERPVLLSDMLMPGTLLPPRWIDMAGPWIEDVFHAVLYANTILGRVPVLVTLKPPAGT
                     QAVRIGVLYSDLKTATAMEQLGRPYYIAGIELTRMSELSRSDWDETQITRNRGVVESF
                     LGPDSASVALMLPGKTYKVTTVTGVQVRNSEGQVQTETDQTETFWFRTDASAPARLDP
                     WMLCTLPDEKEQHVFGHEAIKLVFNTNDVDQLYAAYGKELRARLKAASFRQVDEPGVQ
                     HPLPIGDATLEPVSATHLSPFEAVLTELLKEAGPCIAVDETRARHSMLEIPIPMDPHT
                     DYVLDIEAVDIGAAPNTTGQRVLRKPFSTGAFASTEDFALQFAATRTEHRAVAPGAMQ
                     AIGVQFAARQPEGPELDSAMIAAGLEPMPVPDRPRIVIFWEQAGPAAQPAPAAVLIDA
                     SEPLRRTRMLPREIASDDETPVTRLELVAQEWLNVAEGPGGDAIIDRLIHAPGAQRLL
                     MTLKPGSRGKILQADLVRRAFPLPYLDGAGASDARYPILAETL"
BASE COUNT          413 a          842 c          920 g          461 t
ORIGIN      
        1 ccagcgtctc ggccaggatg ggatagcgcg catcgctggc cccggcgccg tccagatagg
       61 gcagcgggaa ggcgcggcgg accagatcgg cctgcaggat cttgccgcgc gagccgggtt
      121 tcagggtcat cagcagacgt tgcgcgccgg gagcgtggat cagccggtcg atgatcgcgt
      181 cgccgcccgg cccctcggcc acgttcagcc attcctgcgc gacaagttcc agccgcgtga
      241 ccggtgtttc gtcatcgctc gcgatctctc gtggcagcat ccttgtgcgg cgcaggggtt
      301 cggatgcgtc gatcagcacg gcggcagggg cgggctgagc ggcggggccg gcctgttccc
      361 agaagatcac gatgcgcggg cgatccggaa ccggcatcgg ttccagcccg gcggcgatca
      421 tggcgctgtc gagttccgga ccctcgggct gacgggcggc gaattgcacg ccgatcgcct
      481 gcatcgcgcc cggcgccacg gcgcgatgtt cggtgcgggt ggcggcgaat tgcagcgcga
      541 agtcctcggt cgaggcaaaa gcaccggtcg agaagggctt gcgcagcacg cgctggccgg
      601 tggtgttcgg cgcggcgccg atatcgacgg cctcgatatc gaggacgtaa tcggtatggg
      661 ggtccatcgg gatcgggatc tccagcatgg aatggcgggc gcgcgtctca tcgacggcga
      721 tacagggtcc ggcctctttc agaagttcgg tcagcactgc ctcgaagggc gacagatggg
      781 tggccgagac gggctccagc gtggcgtcgc cgatgggcag ggggtgctgc acgcccggct
      841 cgtcaacctg gcggaacgat gccgccttca ggcgtgcccg caattccttg ccataggcgg
      901 cataaagctg atccacatcg ttggtattga agaccagctt gatcgcctcg tggccgaaga
      961 catgctgttc cttttcgtcg ggcagggtgc acagcatcca cggatccagc cgcgccggcg
     1021 cgcttgcatc ggtgcggaac cagaaggttt cggtctggtc cgtctcggtc tgcacctgtc
     1081 cttccgaatt gcggacctgc acgccggtga cggtcgtcac cttgtaggtc ttgcccggca
     1141 gcatcagcgc gacactggcc gaatccggtc cgaggaagct ttcgacaacg ccgcggttgc
     1201 gggtgatctg ggtttcgtcc cagtcgctgc ggctgagttc ggacatgcgg gtcaactcga
     1261 tcccggcgat gtaatagggc cggccaagct gttccatcgc cgtcgcggtc ttgaggtcgg
     1321 aataaagaac gccgatgcgg accgcctgcg ttccggcggg cggcttaagc gttaccagaa
     1381 ccggcacccg ccccaggatc gtgttggcat agagaacggc gtggaagaca tcctcgatcc
     1441 acgggccggc catgtcgatc cagcgcggtg gcagcaaggt gccgggcatc agcatgtcgg
     1501 aaagaagcac gggacgttcg tccagaacgg cgccgtcgcg gtcaaggtag tggatcgtca
     1561 gattgcgacc gcgcccggat tccctgttca gcagccgttc attggcccac atcaggatca
     1621 cgccctcggc gatctcgcct gtggccaggt cgatcacgtc cgacagggga ccgtgcttgt
     1681 ggccgatcag atccagttcg gcggcgatgc tttcggattt gctgcgatcg ccgaagacga
     1741 ccggctgacc ggtatcccac agcggcgaag ccagcacccg accgtcgcaa ttcggcccgt
     1801 ctggattgga tccgccatcc ccgttatccg tcaggctggc ggccagcgag gcgcgatgga
     1861 ccgcgctgcc ctgggcaagg ttctggacca cctgggacag ggtcagccgc ggcacgtcca
     1921 gccggtcgtt gcggcgcttg ccggtgctgc cctcggtcgc cgcgttcagt cgggcggtct
     1981 cggccgcgag ccggtccggg aagcggcccg gcgccgcgcc cgtgccgagg ctggtagccc
     2041 ggcttgcggt ttcggccagc ggcggcacga ggatgcggtc gcggccggcg cggatcaggt
     2101 ccgccagcgg tccggtcagc atcgcatcgg caaggcggcg attgccgccg gcgccggtat
     2161 ttccgtcctg ccggggcagg cagcggacct tgccgccctg cacgatggca gggacgatgc
     2221 cgcgcgcgcg gtccagatcg cgatcgccgg tgcgccaggt ctcgcgaacc tcgagaatgt
     2281 cgtcggcggg ctcggaccgc tcggtcccgc ccgggtcggg ccaggccacg cccttcagcc
     2341 gccacccgct ttccgaaggt ccaagcggtt catcgttgaa ggtccacagc acgggcgcgg
     2401 ccggcgcggc gtcgttgcag atcgtgcccc agcgttcgag gatggactgt tcctggaatt
     2461 cggtgcgctc cagcgcctca cgcaggtcgg cgtgatcgag gccttgctca gcgccaatcc
     2521 gcacgagcgt ctcgtggtcg gcgacgccgc taaagtcatt aaaagtatgt tgcccgacag
     2581 tgtttatgac aacatcaagc aatatgttga aacccaagtc cagtttgtaa ttggga
//
LOCUS       DTVW01000682            2281 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1835806, whole
            genome shotgun sequence.
ACCESSION   DTVW01000682 DTVW01000000
VERSION     DTVW01000682.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2281)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2281)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2281
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1835806"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..999)
                     /locus_tag="EYO87_09050"
     CDS             complement(<1..999)
                     /locus_tag="EYO87_09050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HIC66125.1"
                     /translation="MAEKKVSVRLVAEGGRRVRAELEGVGEAGARGFGRLSREMELAN
                     TRLAAFARRAGLALGAAAAAATASLGLIVRSTAESAAQIRQFAQVANATPEALQRWSA
                     GARTVGIEQEKLADILKDVNDRVGDFLQTGGGPMADFFENVAPRVGVTADQFARLSGP
                     EALQLYVDTLERAGLSQQEMTFYLEAMASDATRLIPLLRNGGAEMARLGDQASDLGAV
                     LDGDALEALRRTQLALGTVSLVFDGLRNRIAVAVAPTIEALANAFVALASDGGILRSA
                     IDGLIGNLGRLASYAATFAAVMAGRWVAGLAAAALSVRGLATALVFLRGALIRTGIG"
     gene            complement(1222..1659)
                     /locus_tag="EYO87_09055"
     CDS             complement(1222..1659)
                     /locus_tag="EYO87_09055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008031850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66126.1"
                     /translation="MIRLNLSNRPEWLDLLPGLRVLVAPLTTALMVSARADPAIDGLS
                     ETSSQEDMALAMAKAVARRAVLEWDGVGDEAGNLVPVSPAGIDALLEIWPVFEAFQAQ
                     YVARGLMLDAEKNASAPLPTGPSAGATATARPAQAPAPTAPQD"
     gene            complement(1662..>2281)
                     /locus_tag="EYO87_09060"
     CDS             complement(1662..>2281)
                     /locus_tag="EYO87_09060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66127.1"
                     /translation="LPSMAIEVAMPEVPRFAMYAGCVMDQLSWQMNRSGLLTATARLI
                     AQGEAIATTTAAGTPTALGLQRFGHFNGVVKRNGTALGNVASAEITYANGLDRIETIR
                     NDGKIEGADPGMAALTGRIEVRFADSALVTQAIDGTPCELEFAYSLGANASFTFTAHA
                     VYLPVPRIEIPGPQGIQATFDWQAAKATSPARMCTAVLVNTVTGY"
BASE COUNT          357 a          796 c          791 g          337 t
ORIGIN      
        1 accaatgccg gtgcggatca gggcgccgcg caggaacacg agcgccgtcg ccaggccgcg
       61 caccgaaagg gccgcagcgg caagccccgc gacccagcgc ccggccatga cggcggcgaa
      121 cgttgccgca taggaggcaa gacggcctag gttgccgatc agcccgtcga tggccgagcg
      181 cagaatgccg ccgtcggagg cgagcgccac gaaggcgttg gccaacgcct cgatggtcgg
      241 ggcgacggcc acagcgatcc tgttgcgcag gccgtcgaac acaagcgaga ctgtgcccag
      301 cgcaagttgt gtacggcgca gggcttccag cgcatcgcca tccagcaccg ccccgaggtc
      361 cgatgcctga tcacccagac gggccatctc cgccccacca ttccgcagga gggggatcaa
      421 ccgtgtggcg tccgaggcca tggcctccag atagaaggtc atctcctgct ggctcaggcc
      481 tgcccgctcc agtgtgtcga cataaagctg cagcgcctcc ggccccgaca gccgcgcgaa
      541 ctggtcggca gtcacaccca cgcgtggcgc gacattctcg aagaaatccg ccatcggccc
      601 gccgccggtc tggagaaaat ccccgacccg gtcgttcacg tccttcagga tatcggcgag
      661 cttctcctgc tcgatcccga ccgtccgcgc cccggccgac cagcgctgca gggcctcggg
      721 cgtcgcgttg gcgacctgcg cgaactgccg gatctgggcg gcgctctcgg cggtggagcg
      781 gacgatcaga ccgagcgaag cggtggccgc tgcggctgcg gccccgagcg caagaccggc
      841 ccggcgcgca aaggccgcaa gccgcgtgtt cgccagttcc atctcgcgcg acaggcggcc
      901 gaagccacgg gccccggcct cgcccacgcc ttccagctcg gcgcgcacgc ggcgtccgcc
      961 ctccgccacg aggcggacgg agaccttctt ctcagccatt ccggcgtcct tccatctgct
     1021 cgttgagttt gcgcaccatc accgcctcga tctcgggcag cagttcggct gcgatcaggg
     1081 cgttgacgcc cagcgccttc gccagtgaaa gcgcggcgcc catgtcccat ccgatgaccg
     1141 cgcccggcgc gatgcgcagc tggccgccga ggcgctgggt caggtcccag acctgccagc
     1201 cctcgaccgt ctgcggccgg ttcagtcttg cggggcagtc ggggcagggg cctgcgcagg
     1261 ccgcgcagta gccgtcgccc ccgccgaagg accagtcggc aagggcgcgg aggcgttttt
     1321 ttccgcgtcc agcatcaggc cacgggcgac atattgcgcc tggaaggcct cgaagacggg
     1381 ccagatctcg aggagggcat cgatcccggc cgggctgacg ggcacgaggt tgcccgcctc
     1441 atcgccgacg ccgtcccatt ccagcacggc gcggcgcgcg acggccttgg ccatggccag
     1501 cgccatgtcc tcctggctgg aggtttccga caggccatcg atggccggat cggcgcgcgc
     1561 cgagaccatc agcgcggtgg tgagaggggc caccaggacg cgcaggccgg gcagcaggtc
     1621 cagccattcg ggccggttcg acaggttcag tcggatcata gtcagtatcc cgtgacagtg
     1681 ttgacgagga cggcggtgca catgcgggcg gggctggtgg ctttggcggc ctgccagtcg
     1741 aaggtcgcct ggatgccctg gggtccgggg atctcgatcc gtgggaccgg caggtagacg
     1801 gcatgcgcgg tgaaggtgaa actggcgttc gccccgaggc tgtaggcgaa ttccagttcg
     1861 caaggcgtgc cgtcgatggc ctgggtcacc agcgccgagt cggcgaagcg cacctcgatc
     1921 cggccggtca gcgctgccat gccgggatct gccccctcga tcttgccgtc gttgcggatg
     1981 gtctcgatcc ggtcgaggcc attggcatag gtgatctcgg ccgaggcgac attgcccaag
     2041 gcggtgccgt tgcgcttcac caccccgttg aaatggccga agcgctgcag gcccagcgcg
     2101 gtcggcgttc ctgcggcggt ggtcgttgcg atggcttcgc cctgcgcgat caggcgggcg
     2161 gtggcggtca gcaggcccga acggttcatc tgccaggaca gctggtccat cacgcagccc
     2221 gcatacatcg cgaaccgcgg cacctcgggc atggcgacct caatggccat ggagggcagg
     2281 g
//
LOCUS       DTVW01000683            2891 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1835917, whole
            genome shotgun sequence.
ACCESSION   DTVW01000683 DTVW01000000
VERSION     DTVW01000683.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2891)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2891)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2891
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1835917"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1092
                     /gene="kynU"
                     /locus_tag="EYO87_09065"
     CDS             <1..1092
                     /gene="kynU"
                     /locus_tag="EYO87_09065"
                     /EC_number="3.7.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012046362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kynureninase"
                     /protein_id="HIC66128.1"
                     /translation="QQRVAAMMADEWSDMLITGWNKAGWYEQPQRVGNRIARLIGAGP
                     GEVVMGDTLSIKVFQALSAALALRPERRVILSDSGNFPSDLYVAQGLATAMGARLRVV
                     APKSVADAIGDDLAVLMLTEVDYRTGRRHDMAALTARAHRAGALTIWDLAHSAGAVDV
                     DLTASEADFAVGCTYKYLNGGPGAPAFIWVNPRHADVARPILQGWMGHEAPFAFTPDY
                     APAPGIERMRVGTPPVIAMAALEAALDVWDEVSMDHLRAKSVDLTGAFIAEVEASCPD
                     LLLNSPRDPERRGSQVGFRHRQGHAVMQALIAEGVIGDFRAPDVMRFGFAPLYNDRDD
                     VSRAAATLARILRDEGWKKAQFMRKAAVT"
     gene            1158..2216
                     /locus_tag="EYO87_09070"
     CDS             1158..2216
                     /locus_tag="EYO87_09070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010391783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HIC66129.1"
                     /translation="MSSRYLPLMGIILSAQPAIAEDPALRVEFVTAEEQTLMLDMRLS
                     GTIEARNSVDLGFRQAGRVVEVLVREGDRVTRGEVLARLDSAQQDQALKLAQAGLASA
                     EAGRAQAQQASDRAAAMLSRGVGTRAARDSAVQALSEAEGMVESAQSRVEQARRAVED
                     TQLLAPDDAVVTQRDLAPGQIVGVAQPVLSLAALDGMEAVFGVADQPMLREAMGRPVR
                     LRALDVERPAMTGIVSEIAPLVDPASGTVTLRARIEDMPGETALLGAAVRGDLTIEGA
                     AGIVVPWTALMRDNGGAAVWVVGQDGRVALTDVTIGSFTDRAVYVADGLTPGQVVVGA
                     GSQLLYPGRAVMAAEVVR"
     gene            2213..>2891
                     /locus_tag="EYO87_09075"
     CDS             2213..>2891
                     /locus_tag="EYO87_09075"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HIC66130.1"
                     /translation="MRHAATILAVLLMTAGPLQALQLPGWLAFGKAVSEPAAPRPVVT
                     EIVEDSGESSRWVPGVIASRNQVDMAFQTLGRMTARRVDLGDRVRKGEILAELATEDL
                     AANTRAARAQLDAAEVQQRTALTTLDRTRALARRNVASAAQLEQAERAAAAAGAAVEQ
                     ARSELAQAENTEGYATMKAPFDGVVSAVFETQGAVVNAGKPILRLSAEDEREAVIDLP
                     EPALAGLP"
BASE COUNT          439 a          921 c         1084 g          447 t
ORIGIN      
        1 cagcagcggg tggcggcgat gatggccgat gaatggtcgg acatgctgat cacgggctgg
       61 aacaaggcgg gctggtatga acagccccaa cgcgtcggga accggatcgc gcggctgatc
      121 ggcgccgggc cgggcgaggt ggtgatgggt gacacgctgt cgatcaaggt gtttcaggcg
      181 ttgagcgcgg ccctggccct gcggcccgaa cggcgggtga tcctgtccga cagcggcaat
      241 tttccgtccg atctgtatgt cgcgcagggc ctggccaccg cgatgggtgc caggttgcgc
      301 gtggtcgcgc ccaagagcgt ggccgatgcg atcggcgacg acctggcggt gctgatgctg
      361 accgaggtcg attaccgcac ggggcgccgg cacgacatgg cggcgctgac ggcgcgggcg
      421 catcgggccg gggcgctgac gatctgggat ctggcccatt ccgccggcgc ggtcgatgtg
      481 gacctgaccg cctcagaggc ggatttcgcc gtgggctgca cctacaagta tctgaatggc
      541 gggccgggcg ctccggcctt catctgggtc aacccgcgcc atgcagatgt cgcgcggccg
      601 atcctgcagg gctggatggg gcacgaggcg ccctttgcct tcacgcccga ctacgccccc
      661 gccccgggga tcgagcggat gcgggtcggc acgccgccgg tcatcgcgat ggccgcgctg
      721 gaggcggcgc tggatgtctg ggacgaggtt tcgatggacc atctgcgcgc gaaatcggtc
      781 gatctgaccg gggccttcat cgccgaggtc gaggcaagtt gccccgatct gctgctgaat
      841 tccccgcgcg acccggaacg gcgcggctct caggtcgggt tccggcatcg ccagggccat
      901 gcggtgatgc aggcgctgat cgccgaaggg gtgatcgggg attttcgcgc gccggacgtg
      961 atgcgcttcg gtttcgcgcc gctctacaac gatcgcgacg acgtgtcgcg cgctgccgca
     1021 acgttagccc ggatcctgcg cgatgaaggc tggaaaaagg cgcagttcat gagaaaagct
     1081 gccgtcacct gagacgaact tcccgaggtc gcgcgacgat cacgcaaaag tctggcacat
     1141 ttctggtgac aagaatgatt tcatcgcgat atctgccgct tatgggaata atcctgtcag
     1201 cccagccggc catcgccgag gatccggcct tgcgggtcga attcgtcacg gcagaagaac
     1261 agacgctgat gctggacatg cgcctgtcgg gcacgatcga ggcgcgaaac agtgtcgatc
     1321 tgggttttcg tcaggccggg cgcgtggtcg aggtcctggt gcgcgagggt gaccgcgtga
     1381 ccaggggaga ggttctggcg cggcttgatt cggcgcagca ggatcaggcg ctgaaactgg
     1441 cccaggctgg cctggcctcg gccgaggccg ggcgcgcgca ggcgcaacag gccagcgacc
     1501 gtgcggcggc catgctgtcg cgcggtgtcg gcacccgtgc ggcgcgcgat tcggcggtgc
     1561 aggccctgtc cgaggcggaa ggaatggtcg aaagcgcgca aagccgggtc gagcaggcgc
     1621 gccgggcggt cgaggatacg cagcttctgg cgccggacga tgccgtcgtg acccaacgcg
     1681 acctggctcc ggggcagatc gtcggcgtgg cgcagccggt cctgtctctg gccgcgctgg
     1741 acgggatgga agcggtgttc ggcgtcgcgg atcaaccgat gttgcgcgag gccatgggcc
     1801 gaccggtgcg cctgcgcgcg ctggatgtcg aacgtccggc catgaccggc atcgtcagcg
     1861 agatcgcgcc gctggtcgat ccggcctcgg gcaccgtcac cctgcgcgcc cggatcgagg
     1921 acatgccggg cgagaccgcg ctgctgggcg cggcggtgcg cggcgacctg acgatcgagg
     1981 gggccgcagg catcgtcgtc ccctggaccg cgctgatgcg cgacaatggc ggcgccgccg
     2041 tctgggtggt gggccaggac ggccgcgtcg ccctgaccga tgtcaccatc ggcagcttca
     2101 ccgaccgggc ggtctatgtc gcggacgggc tgacgccggg gcaggtggtc gtcggcgcgg
     2161 gatcgcaatt gctgtatccc ggccgggcgg tcatggcggc cgaggtcgtc cgatgaggca
     2221 cgccgccacg attctggcgg tgctgctgat gacggccggt ccgcttcagg ccttgcaact
     2281 gccgggctgg ctggcctttg gcaaggcggt cagcgaaccc gcggccccgc gtccggtcgt
     2341 caccgaaatc gtcgaggaca gcggcgaatc atcgcgctgg gtgcccggcg tgatcgcctc
     2401 gcgcaatcag gtcgacatgg ccttccagac gctgggccgc atgacggccc gtcgcgtcga
     2461 tctgggcgac cgggtccgca agggcgagat tctggccgag cttgcgaccg aggatctggc
     2521 cgccaatacc cgcgccgcgc gggcgcagct ggatgccgcc gaggtgcagc agcggacggc
     2581 cctgacaacg ctggaccgga cccgtgcgct ggcccggcgc aacgtcgcct cggcggcgca
     2641 gcttgaacag gccgaacgcg ccgccgccgc cgcgggcgcg gccgtcgaac aggcccgctc
     2701 ggaactggcg caggccgaga ataccgaagg ctacgcgacc atgaaagcgc ccttcgacgg
     2761 cgtggtcagc gccgttttcg aaacccaggg cgcggtggtc aatgccggca agccgatcct
     2821 gaggctttcg gccgaagacg aacgagaggc ggtcatcgac ctgccggaac cggcgctggc
     2881 cgggttgccg c
//
LOCUS       DTVW01000684            1521 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1836630, whole
            genome shotgun sequence.
ACCESSION   DTVW01000684 DTVW01000000
VERSION     DTVW01000684.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1521)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1521)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1521
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1836630"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1521)
                     /locus_tag="EYO87_09080"
     CDS             complement(<1..>1521)
                     /locus_tag="EYO87_09080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_351480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HIC66131.1"
                     /translation="MQAWPAPPFRPEAMSLPQILLAFGLMPRGIIALLAGAALGLSGA
                     ILQAVLRNPVADPTTLGLSAGAQLALVLATILWPGLLSHGRWPVALSGAGLAAALVLG
                     IGARRGFAPVTMVVAGLLVGMTAAAIATAVTLARGHYLLSLVIWNGGALAQQDWSGVR
                     ALAAVVALGGIGAALLVRPLRMLSLGAGSASGLGMNVAGMRLAAVALAVWIAASVSAE
                     LGLIAFVGLAAPALARILGARGIAGNLAVSPVIGAALLSLCDGLVLGLAAAGGAELPT
                     GAVTGLIGGPLLIWLLPRLRGTTPPGTETAEGPAPRRARPARLLITLAIGALAAALAM
                     LWIGRGPQGWLLLDPQSLAAFLPMRLPRLIAAASAGAALAMAGAILQRLTANPLASPE
                     VLGVSGGASLGYAAVVFVAVAPTAALLGAGATIGGAVALALVAAFTASRDMPPERILL
                     AGIAISALATAVLSAIMATGDARSWVILGWLAGSSSGVGMRGALALSLVAAGMLAA"
BASE COUNT          258 a          618 c          519 g          126 t
ORIGIN      
        1 caggccgcca gcatccccgc cgcgaccagg ctcagggcca gggcgccgcg catgcccacg
       61 cccgaggatg atcccgccag ccagcccagg atgacccagg atcgcgcgtc gcccgtggcc
      121 atgatcgccg acaggaccgc ggtcgccagc gccgatatcg cgattcccgc cagcaggatg
      181 cgttcgggcg gcatgtcgcg gcttgcggtg aaggccgcga ccagggccag cgccacggcc
      241 ccgccgatcg tcgcgccggc gcccagcaac gccgctgtcg gggcgacggc aacgaacacc
      301 accgcagcat agcccagcga ggcgccgccc gacacgccca gcacctcggg cgaggccagc
      361 ggattggccg tcagccgttg caggatcgcg cccgccatgg ccagcgccgc cccggccgag
      421 gcggcggcga tcaggcgcgg caggcgcatc ggcaggaagg cggcaaggct ttgcgggtcc
      481 agcagcagcc agccctgcgg gccgcgcccg atccacagca tagccagcgc cgccgccaga
      541 gccccgatcg ccagggtgat cagcaggcgc gccggccggg cgcggcgcgg ggcggggcct
      601 tcggcggtct cggttcccgg cggcgtggtg ccgcgcaggc ggggcagcag ccagatcagc
      661 agcggccccc cgatcagccc ggtcacggca ccggtcggca attcagcccc gccggcggcc
      721 gcaaggccaa gcaccagccc gtcgcacagc gacagcagcg ccgccccgat caccggcgac
      781 acggcaagat ttccggcgat gccgcgcgcg cccaggatgc gcgcaagcgc gggcgccgca
      841 aggcccacga aggcgatcag ccccagttcg gccgagacgc tggcggcgat ccagaccgcc
      901 agcgcgaccg cggccagacg catgccggcc acgttcatgc ccagacccga ggcagagccc
      961 gcccccagcg acagcatgcg cagcggccgc accagcagcg ccgcgccgat cccgcccagg
     1021 gcaacgacgg ccgccagcgc gcgcacgccc gaccaatcct gttgcgccag cgcgccgcca
     1081 ttccagatca ccagcgacaa aaggtaatgt ccccgcgcca gcgtcaccgc cgtggcgatc
     1141 gcggcggcgg tcatcccgac cagcaggccg gcgaccacca tcgtcaccgg ggcgaaaccg
     1201 cgccgcgcgc cgatgcccag aaccagcgcc gcggccagtc ccgccccgct cagcgccacc
     1261 ggccaccggc catgcgacaa caatcccggc cacaggatcg tcgccagaac cagcgccagc
     1321 tgcgccccgg ccgagagacc cagagtcgtc ggatccgcaa ccgggttgcg cagcaccgcc
     1381 tgaaggattg cccccgacag gccaagtgcc gcccccgcca gcagggcgat gattccgcgc
     1441 ggcatcagcc cgaaggccag caggatctgg ggcaggctca tcgcctcagg ccggaacggc
     1501 ggcgccggcc aggcctgcat g
//
LOCUS       DTVW01000685            1312 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1836695, whole
            genome shotgun sequence.
ACCESSION   DTVW01000685 DTVW01000000
VERSION     DTVW01000685.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1312)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1312)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1312
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1836695"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..209)
                     /locus_tag="EYO87_09085"
     CDS             complement(<1..209)
                     /locus_tag="EYO87_09085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SlyX family protein"
                     /protein_id="HIC66132.1"
                     /translation="MDKDVAARLDALEEALAHQARMIEDLSEVIAARDGEIARLGRRV
                     TLLMQAAAERELDAGGSIPLADQRPP"
     gene            263..>1312
                     /locus_tag="EYO87_09090"
     CDS             263..>1312
                     /locus_tag="EYO87_09090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010392603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine--tRNA ligase"
                     /protein_id="HIC66133.1"
                     /translation="MAKDQKKQPRPKAETPKGFRDYFGADVTERKAMLDRIAEIYHRH
                     GFDPLETSAVETVEALGKFLPDVDRPNAGVFAWQEETVPGGGSGDWLALRYDLTAPLA
                     RVAAQFRNDLPTPYRRYAMGPVWRNEKPGPGRFRQFYQCDADTVGSASVGADAEICVM
                     LADALEAVGIARGDYMVRINSRKVLNGVLEAAEVRAEQAESVLRQIDKFDKVGREGVL
                     ALLTAGRKDDSGAFIEGVGLSDAQAAPVLAFLTSGGDNNQATLDNLRAAVGGSAIGAE
                     GVEELAQIAAMLEAMGVGGDRAVIDPAVVRGLGYYTGPVFEAELTFEILDDYDLVVDT
                     MLRASGQSDGLPEDPH"
BASE COUNT          221 a          426 c          454 g          211 t
ORIGIN      
        1 ggtggtcgct ggtcggccag cgggatcgat ccgcccgcat ccagttcgcg ttcggccgct
       61 gcctgcatca acagagtgac gcggcggccg agacgcgcga tttcgccatc ccgggccgcg
      121 atgacctcgc tgagatcctc gatcatgcgg gcctggtgag ccagcgcctc ttccagggca
      181 tccagccggg ccgccacatc cttgtccatg tcactccctt ccgctacagc agccacggat
      241 ttggccccga aaggcaaaga ccatggcgaa ggatcagaaa aaacagccgc gccccaaggc
      301 cgagacgcca aagggctttc gcgactattt tggcgcggat gtgaccgagc gcaaggcgat
      361 gctggaccgc atcgccgaaa tctaccatcg ccacggcttc gatcccctgg aaaccagcgc
      421 cgtcgagacg gtcgaggccc tcggcaagtt cctgcccgat gtggaccgac ccaatgccgg
      481 cgtctttgcc tggcaggaag agacggtgcc gggcggcggt tcgggtgact ggctggccct
      541 gcgctatgac ctgacggcac cgctggcgcg cgtggccgcg cagttccgca atgatctgcc
      601 gaccccttac cggcgctatg cgatggggcc ggtctggcgc aacgaaaagc cggggccggg
      661 gcggttccgg cagttctatc aatgcgatgc ggatacggtg ggcagcgcct cggtcggtgc
      721 cgatgccgag atctgcgtga tgctggccga tgcgctggag gcggtgggca tcgcgcgcgg
      781 cgactacatg gtgcggatca acagccgaaa ggtcctgaac ggcgtgctgg aggccgccga
      841 ggtccgcgcc gaacaggccg aaagcgtgct gcgccagatc gacaagttcg acaaggtcgg
      901 ccgcgagggc gtgctggcgc tgctgaccgc cggacgcaag gatgacagcg gcgcctttat
      961 cgagggtgtc ggattgtccg acgcccaggc cgcgccggtg ctggcctttc tgacctccgg
     1021 tggcgacaac aatcaggcca cgctggacaa tctgcgcgcc gccgtgggtg gctcggccat
     1081 cggtgccgaa ggggtcgagg aactggcgca gatcgccgcg atgctggagg cgatgggtgt
     1141 aggcggcgac cgcgccgtca tcgaccctgc ggtggtgcgc ggccttggct attataccgg
     1201 tccggtcttc gaggccgaac tgaccttcga gatcctcgac gactacgacc tcgtcgtgga
     1261 caccatgctc cgggccagcg gccagtcgga tggcctaccc gaggacccgc ac
//
LOCUS       DTVW01000686            2430 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1837588, whole
            genome shotgun sequence.
ACCESSION   DTVW01000686 DTVW01000000
VERSION     DTVW01000686.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2430)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2430)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2430
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1837588"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..268
                     /locus_tag="EYO87_09095"
     CDS             <1..268
                     /locus_tag="EYO87_09095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015496778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF3489 domain-containing protein"
                     /protein_id="HIC66134.1"
                     /translation="RKAKAEPASSTADVLSIPGRAGTKQAAIIALLQRPGGASIAEIV
                     AATGWMAHSARGMISGVLKKKLGLPITSEKVEGRGVVHRILPMD"
     gene            complement(282..1541)
                     /locus_tag="EYO87_09100"
     CDS             complement(282..1541)
                     /locus_tag="EYO87_09100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HIC66135.1"
                     /translation="MDLAFAPRQIEFWPIERLRPYARNAKMHGADQVARIAASMARFG
                     WTVPCMVGDDGELIAGHGRVLAATELGLAEVPVIRLGHLDEAERRAYRIADNKLTELG
                     DWDEEMLRDEVAGLLADDFDLSLLGFAEDELEALLQDPDLGEDGAAEGENEVPEPPTD
                     PVSVPGDLWRLGDHRLICGDSTSADVVGKLLGDVRPLLMVTDPPYGVEYDPAWRNATG
                     AAKTKRTGKVLNDDRADWREAWALFPGDVAYVWHGALHATTVADSLIAAGFDIRSQII
                     WAKDRLVLSRSDYHWQHEPCWYAVKKRGKGHWAGDRKQTTLWQIANRDQDAETVHGTQ
                     KPVECMRRPILNNSSPGQAVYEPFMGSGTTLIAAETTGRVCYGIELNPAYVDVAVARW
                     QNLTGKEATLAESDESFADLKEKRIEA"
     gene            1662..>2430
                     /locus_tag="EYO87_09105"
     CDS             1662..>2430
                     /locus_tag="EYO87_09105"
                     /inference="COORDINATES: protein motif:HMM:PF13280.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WYL domain-containing protein"
                     /protein_id="HIC66136.1"
                     /translation="MTAESMCSGCVAECGPMSASAGTVTPAIQSDTRFQMQEAEIPKN
                     LDRNACTMRCRSSFLFQGGITMRPGRTPALTLNLTRRALARRLVGAAAMIGIGQGAAA
                     QSMANPASALDPELRDAALRGLALAGYRGDPVTAAPANAALDRLAASDPEAALLGRIY
                     QMLDVRPAQYWPEDVPEAAAADLAVLHAAIRVRQPVAFGYTDLSGNKTTRRVLPLALV
                     HPPQGVKLLAWCEEREGFRQFFIRAMTALTPQPGDFSA"
BASE COUNT          403 a          809 c          786 g          432 t
ORIGIN      
        1 acgcaaggcg aaggcggaac cggcctcgtc gacagcagat gtgctctcga tccctggccg
       61 cgcgggcacg aaacaggcgg cgatcatcgc gctcctgcag cggccgggag gtgcgagtat
      121 cgccgagatc gtcgcggcga ccggctggat ggcccacagc gcgcgaggca tgatctcagg
      181 tgtgttgaag aagaagcttg gccttccgat cacttcggag aaggtcgagg gccggggagt
      241 ggttcaccgc attctgccga tggactgacg gcgctgacgg ttcacgcctc gatccgcttt
      301 tctttcagat cggcgaagct ttcgtcgctt tccgccagtg tcgcttcctt gccggtcagg
      361 ttctgccagc gggccactgc cacatcgaca taggcggggt tcaactcgat gccgtagcag
      421 acccggccgg tggtttcggc cgcgataagg gtggtgcccg atcccatgaa gggttcatac
      481 acggcctgtc cggggctcga gttgttcagg atcgggcggc gcatgcattc gaccggcttc
      541 tgggtgccgt ggacggtttc cgcatcctga tcgcgattgg cgatctgcca gagcgtcgtc
      601 tgcttgcggt ccccggccca atgacccttg ccgcgtttct tcaccgcata ccagcagggt
      661 tcgtgctgcc agtggtaatc gctgcggctg agcaccagcc ggtccttggc ccagatgatc
      721 tgtgagcgga tgtcgaaccc ggctgcgatc aggctgtcgg cgacagtcgt cgcatgcagc
      781 gcgccatgcc agacataggc gacgtcgccg ggaaacagcg cccaagcctc gcgccagtcg
      841 gcccggtcat cgttcagcac cttgccggtg cgtttggtct tggccgcgcc cgtggcattg
      901 cgccatgccg gatcgtattc cacgccatag ggcgggtcgg tcaccatcag cagtggccgg
      961 acatcgccca gaagcttgcc gaccacatcg gcgctggtgc tgtcgccgca gatcaaccgg
     1021 tgatcgccaa gccgccagag atcgcccggc accgagaccg gatcggtcgg aggctccggc
     1081 acctcgttct cgccctccgc cgcaccatct tcaccgagat ccggatcctg cagcagggcc
     1141 tccagctcgt cctcggcaaa gcccagcagc gacaggtcga agtcatcggc cagaagccca
     1201 gccacctcgt cccgcagcat ttcctcgtcc cagtcgccga gttccgtcag cttgttgtcg
     1261 gcgatccggt aggcccggcg ttcggcctcg tcgagatggc caagccggat caccggcacc
     1321 tcggcaagcc ccagttcggt cgccgccagc acccgtccgt gacccgcgat caactcgcca
     1381 tcgtcgccga ccatgcaggg cacggtccag ccgaagcggg ccatgctggc ggcgatccgg
     1441 gcgacctgat cggccccgtg catcttggcg ttccgggcat aggggcgcag ccgctcgatc
     1501 ggccagaact cgatctggcg cggcgcaaag gcgaggtcca tggggcaggt ctcgggatat
     1561 gggggctgaa aaacgaaagc gcccgcgagg ggatatcctc cgggcgcaat tcttcgatgc
     1621 tcaaggggta ggtcaagccg ggcatagatg tcaatctgaa aatgacagcg gaatcaatgt
     1681 gttctgggtg tgtcgccgaa tgcggcccaa tgtcggcttc tgccgggaca gtgacgccag
     1741 cgatacagtc agacactcgt ttccagatgc aggaggcgga aatcccgaaa aatctggacc
     1801 gaaacgcctg caccatgcga tgcaggtcct cttttctatt ccaaggagga atcaccatgc
     1861 gacccggtcg cacgcccgct ctgaccctga acctcacccg ccgcgcgctc gcgcgccggt
     1921 tggtcggcgc tgccgccatg atcggtatcg ggcaaggggc ggcggcgcag agcatggcaa
     1981 atccggcatc cgccttggat cctgaactgc gcgacgcggc gttgcgtggt ctggctttgg
     2041 ctggttatcg cggcgatcct gtcactgcgg cgcccgccaa tgccgccctg gaccgtctgg
     2101 ccgcatccga tccagaggcg gccctgctcg gccgcatcta ccagatgctc gatgtccgcc
     2161 cggcgcaata ctggcccgag gacgtgcccg aggcggctgc cgccgatctg gcggtgctgc
     2221 acgcggccat ccgcgtcagg cagccggtcg cctttggcta taccgacctg tcggggaaca
     2281 aaaccacgcg cagggtgctg ccgctggcgc tggtccatcc gccgcagggc gtgaagttgc
     2341 tggcatggtg cgaggaacgc gaaggcttcc gccagttctt catccgcgcc atgaccgcgc
     2401 tgaccccgca gcccggcgac ttcagcgccg
//
LOCUS       DTVW01000687            1909 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1838066, whole
            genome shotgun sequence.
ACCESSION   DTVW01000687 DTVW01000000
VERSION     DTVW01000687.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1909)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1909)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1909
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1838066"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(83..808)
                     /locus_tag="EYO87_09110"
     CDS             complement(83..808)
                     /locus_tag="EYO87_09110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007427259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body L-ring protein FlgH"
                     /protein_id="HIC66137.1"
                     /translation="MKPIHLLCLALALGACSRAANIGRPPQLTSPREGEEFIAMTNPP
                     LEIPVDSGRPEAAASLWAGTTSSLITDRRAATRGDILTVVIQIDDRAEISNSSGRSRA
                     AGDKMSMPQMAGIPQRLANKLPDGASFDNLADAKSSSTYKGSGNISRRDKLTLRVAAT
                     VTDRLPNGTLQIEGTQEVRVNYELRELTVSGFVRPGDIDRNNEIAYDRIAGARISYGG
                     RGQITDVQQPRYGQQIADILLPY"
     gene            complement(835..1251)
                     /gene="flgA"
                     /locus_tag="EYO87_09115"
     CDS             complement(835..1251)
                     /gene="flgA"
                     /locus_tag="EYO87_09115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body P-ring formation protein
                     FlgA"
                     /protein_id="HIC66138.1"
                     /translation="MRALATIAALLVALPASAGGLAAARTLPAGTIITAADLRAIDSN
                     RPGLDDPSQAIGLQTRITIYEGRPIQATLLQAPKLVGRNQIVRLSFRRGALRIDAQGR
                     TLSDGAAGDVIRVMNLDSRSIINALVEEDGSLTTLN"
     gene            complement(1251..>1909)
                     /gene="flgG"
                     /locus_tag="EYO87_09120"
     CDS             complement(1251..>1909)
                     /gene="flgG"
                     /locus_tag="EYO87_09120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005979370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="flagellar basal-body rod protein FlgG"
                     /protein_id="HIC66139.1"
                     /translation="QYQQATRPGTVTAADGTVIPAGVQLGLGVRPTAVSINLQQGSLT
                     QTGGDLDLAIDGDGYLEVTLPSGISGYTRDGGLKRSPEGQIVTSDGYPVVPEITIPDD
                     ARSISINAAGEVYAYFNDRVEPELLGQLTLAGFANEKGLEAIGSNLFLETAASGAAGV
                     ANPGQQGLGTLRQGYLEDSSVDAVREITELIQAQRGYELNAKVITAADQMLGATTQVR
                     "
BASE COUNT          317 a          602 c          635 g          355 t
ORIGIN      
        1 gcaggatctc gccgccggcg atgccgccgc caagcgcggc aagcggcagc aggaatgtca
       61 ggatcttctt catcggcggt cctcaatagg gcagaaggat atcagcgatc tgctggccat
      121 agcggggttg ctgcacatcc gtgatctgcc cccgaccgcc ataggaaatg cgcgcaccgg
      181 cgatgcggtc ataggcgatc tcgttgttgc ggtcgatgtc gccaggccgc acgaacccgc
      241 tgaccgtcag ttcgcgcaat tcgtagttca cccggacctc ttgggtgccc tcgatctgaa
      301 gggttccatt gggcagccgg tcggtgaccg tcgccgcgac ccgcaaggtc agcttgtcgc
      361 gacgcgagat attgccgctg cccttgtagg tcgaagatga tttcgcgtcg gccagattgt
      421 cgaagctggc gccgtccggc agcttgttgg ccagccgctg cggaatgccg gccatctgcg
      481 gcatcgacat cttgtcgccc gccgcgcgcg aacggcccga cgaattgctg atctctgcgc
      541 gatcgtcgat ctggatcacc accgtcagga tgtcgccgcg cgtcgccgca cgccggtcgg
      601 tgatcagaga ggatgtggtc ccggcccaca gcgatgccgc agcctccggt cggccagaat
      661 cgaccggaat ttccagcggc ggattggtca tggcgatgaa ttcctcgcct tcgcggggtg
      721 aggtcagttg cggcggccgg ccgatattgg cggcgcggga acaggcaccc aatgcaaggg
      781 caaggcaaag caggtggatc ggtttcatcg gaattccttg gcttctgcgc cgcgtcagtt
      841 cagcgtcgtg aggctgccgt cttcttcgac gagagcattg atgatggaac gtgaatcgag
      901 gttcatcacc cggatcacgt cgcccgccgc accgtccgac agcgtccggc cctgggcatc
      961 gatccgcaag gcgccgcgac ggaatgacag gcgcacgatc tggttgcgcc cgaccagctt
     1021 cggggcttgc agcaacgtcg cctggatggg acggccctcg tatatcgtga tgcgggtctg
     1081 caacccgatg gcctgcgacg gatcgtccag accgggccgg ttgctgtcga tggccctgag
     1141 atcggcggcg gtgatgatgg tgcccgcggg cagggtgcgc gccgccgcca atccgccggc
     1201 cgaggcaggc agggcgacca gcagcgccgc gattgttgca agcgcccgca tcaccgcacc
     1261 tgcgtcgtgg cgccgagcat ctggtcggcg gcggtgatga ccttggcgtt caattcgtat
     1321 ccacgctgtg cctggatcag ttcggtgatc tcgcgaaccg cgtcgaccga actgtcttcc
     1381 agatagccct gccgcaaggt gcccagaccc tgctgaccgg gattggcaac gccggccgcg
     1441 ccagaggccg cggtttcgag gaacaggttc gacccgatcg cctccagccc cttttcattg
     1501 gcgaagccgg caagcgtcag ttgccccagc aattccggct cgacgcgatc gttgaaatag
     1561 gcatagacct ctcccgcggc gttgatcgag attgatcggg catcatcggg aatggtgatt
     1621 tccggcacca cggggtaacc atccgaggtc acgatctggc cttcgggtga ccttttcagt
     1681 ccgccatcgc gtgtatatcc cgagatcccg gagggaagcg tcacctccag atagccgtca
     1741 ccgtcgatcg ccaggtccag atcgccgccg gtctgggtca gcgaaccttg ctgcaggttg
     1801 atgctgacgg cggtggggcg gacgcccagg cccagttgta cgccggccgg gataacggtg
     1861 ccatcggcgg cggtgacggt gccggggcgg gtggcctgct gatattgca
//
LOCUS       DTVW01000688            1939 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1839321, whole
            genome shotgun sequence.
ACCESSION   DTVW01000688 DTVW01000000
VERSION     DTVW01000688.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1939)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1939)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1939
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1839321"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1250
                     /locus_tag="EYO87_09125"
     CDS             <1..1250
                     /locus_tag="EYO87_09125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010660871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="carbohydrate kinase"
                     /protein_id="HIC66140.1"
                     /translation="RLAASPADRARFEATGTGLNTCQQGAQMAHMDTHAPDMLDRAEV
                     ALHCKDWLYLNLTGQRATDPSEASFTFGNFRHRRYDDTAIAALGLSHRRALLPEIVDG
                     SQATHPLTGDAARQTGLRAGTPVSLGYVDMVMTALGAGVYGGTAGDVACSTVGSTGVH
                     LRAVAAGDVQLNQQGTGYVICLPIPGIVTQVQTNMAATLNLDWVLGIAAGILSDLGRP
                     VTHRDLVAHLDEWLGQARPGQIVYHPYISDAGERGPFVNADARAGFVGLASGHRYPDL
                     VRAVAEGLGMAMRDCYAAMGPLPAELRLTGGAARSPALRGILSAALAAPVRVSARDEA
                     GAAGAAMMAAVAIGAYPDMEACIAEWVTPLLGKAEAPDPALMAAYDGLFPAFSAARHA
                     LPPVWDALAAARAAFAKGQQDEQ"
     gene            1240..>1939
                     /locus_tag="EYO87_09130"
     CDS             1240..>1939
                     /locus_tag="EYO87_09130"
                     /EC_number="1.1.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018001170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate dehydrogenase"
                     /protein_id="HIC66141.1"
                     /translation="MSNDSETIDLFVIGGGINGAGIARDAAGRGLKVVLCEKDDLAEG
                     TSSRSGKLVHGGLRYLEYYEFRLVREALIEREVLMRAAPHIIWPMRFVLPHSPQDRPA
                     WLVRLGLFLYDHLGGRRKLPGTRTLDLRRDPEGAPLLDTYIRGFEYSDCWVDDARLVV
                     LNAVDAAEKGARVLTRSPCISARRENGIWVVRTKSEATGEVRSFRARCLVNCAGPWVS
                     DIITRVAGANSARNV"
BASE COUNT          279 a          647 c          695 g          318 t
ORIGIN      
        1 cgcggctggc ggcgagcccg gcggatcgtg cccggttcga ggccacggga accgggctga
       61 acacctgcca gcagggtgcg cagatggcgc atatggatac acatgcgccc gacatgctgg
      121 accgggccga agtcgcgctg cattgcaagg actggctgta tctgaacctg accggccagc
      181 gcgcgaccga tccgtccgag gccagcttca ccttcggcaa tttccgccat cgccgctatg
      241 acgacacggc gatcgcggcg cttggcctgt cccatcgccg ggccctgctg cccgaaatcg
      301 tcgatggcag ccaggctacg catccgctga ccggcgacgc cgcgcgccag accggtttgc
      361 gggccggtac gccggtcagc cttggctatg tggacatggt gatgacggcg cttggcgcgg
      421 gcgtctatgg cggcacggcc ggcgatgtcg cctgttcgac tgtcggatcg accggggtgc
      481 atctgcgcgc ggtggccgcc ggcgacgtcc aactgaacca gcaggggaca ggctatgtca
      541 tctgcctgcc gatccccgga atcgtgaccc aggtccagac caacatggcg gcgacgctga
      601 acctggactg ggtgctgggc atcgcggccg ggatcctgtc cgatctgggt cgccccgtga
      661 cgcaccgcga tctggtcgcg catctggacg aatggctggg acaggcgcgg ccgggccaga
      721 tcgtctatca cccctatatc tcggatgccg gggaacgcgg tcccttcgtc aatgccgatg
      781 cgcgggcggg gttcgtggga cttgcctcag gtcaccgcta tcccgacctg gtccgggccg
      841 tcgccgaggg gctggggatg gcgatgcgcg attgctatgc cgcgatgggg ccattgccgg
      901 ccgaactgcg cctgaccggc ggggccgcgc ggtcacccgc cctgcgcggt atcctgtcgg
      961 ccgcgctggc cgcgccggtc cgggtctcag cgcgggacga ggcgggcgct gccggtgccg
     1021 cgatgatggc cgccgtcgcc atcggcgcct atcccgacat ggaggcctgc atcgccgaat
     1081 gggtaacccc gctgctgggc aaggccgaag cgcccgatcc ggcgctgatg gctgcctatg
     1141 acggcctgtt tcccgccttc agcgccgcgc ggcatgccct gccgccggtc tgggatgcgc
     1201 ttgccgccgc ccgcgcggcc tttgcgaaag gacagcagga tgagcaatga cagcgaaaca
     1261 atcgacctgt tcgtgatcgg cggcggcatc aacggcgccg gtatcgcccg cgatgccgcc
     1321 ggccgcgggc tgaaggtcgt gctgtgcgaa aaggacgatc tggccgaggg aacctcgtcg
     1381 cggtcgggca agctggtcca tggcgggctg cgctatctgg aatattacga attccgcctg
     1441 gtccgcgagg cgctgatcga acgcgaggtg ctgatgcgcg cggcgccgca catcatctgg
     1501 ccgatgcgct tcgtgctgcc ccacagcccg caggaccgtc cggcctggct ggtgcggctg
     1561 ggcctgtttc tctatgatca cctgggtggc cggcggaagt tgcccggcac ccggacgctg
     1621 gacctgcgcc gcgatcccga gggggcgccg cttctggaca cctatatcag gggtttcgaa
     1681 tacagcgact gctgggtgga cgatgcccgt ctggtcgttc tgaacgccgt tgacgcggcc
     1741 gagaaggggg cgagggtgct gacccgcagc ccctgcatct cggcccggcg cgagaacggg
     1801 atctgggtcg tccggacgaa atccgaggcg acgggcgagg tgcgcagctt tcgcgcccgc
     1861 tgcctggtca attgcgcggg cccctgggtc agcgacatca tcacccgcgt cgcgggcgcg
     1921 aattcggcgc gcaacgtgc
//
LOCUS       DTVW01000689            1124 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1842589, whole
            genome shotgun sequence.
ACCESSION   DTVW01000689 DTVW01000000
VERSION     DTVW01000689.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1124)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1124)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1124
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1842589"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(61..393)
                     /locus_tag="EYO87_09135"
                     /pseudo
     CDS             complement(61..393)
                     /locus_tag="EYO87_09135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008225813.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
     gene            550..>1124
                     /locus_tag="EYO87_09140"
     CDS             550..>1124
                     /locus_tag="EYO87_09140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_354488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent chaperone ClpB"
                     /protein_id="HIC66142.1"
                     /translation="MNMEKFTERSRGFLQAAQTIAIREENQRVVPEHLLKALMDDDQG
                     LASNLITRSGGDAKRVQQAVDQAVAKLPKVSGGNSQVYVDPSMVRVLDEAEKVAKKAG
                     DSFVPAERILMALAMVNTNAKDALEAGSVKAQNLNAAINDIRKGRTADSASAEDSYEA
                     LEKYARDLTQAARDGKIDPIIGRDEEIRRAM"
BASE COUNT          235 a          368 c          347 g          174 t
ORIGIN      
        1 cgagttggtc caatcccagc cccataacgg cagcatcaac taactcctct gcattcgctg
       61 agccaggatc ttcatgttcg atccgcccgc gccttccttg gccgcgcgga tgacatgcgg
      121 gtcgccgtgg acggtcagga aatccagatc gaactgcgcc agcccgcgca cggcggcctc
      181 gatcgtggcg ccgatgtcga acagcttcat gtccagaaag atgcgcttgc catgttcggc
      241 cttcagctcg ttggccaggg ccagtccgcc gccggtcagc atccccagcc cgatcttgta
      301 gaagccgacc gaatcgccaa gcttctgtgc cagatccagt cccgccaccg cgttcggcac
      361 atccagcgcc acgatcagcc ggtcgtccat catcgccccc gatttttcgc aaacggccgc
      421 cttatacacg gtttctcgcg gcttgaaagc acgaaagccg gtgcccattt cccaagccat
      481 gacccggacc gggacgcgcc gcgacagggc gtccgcgacg cgggggctga tgaaaaagga
      541 gaattgccga tgaacatgga aaagttcacg gaacggtcgc gcggcttcct gcaagccgcc
      601 cagaccatcg cgatccgcga ggaaaaccag cgggtcgtcc cagaacatct tctgaaggcg
      661 ttgatggatg acgatcaggg tctggcgtcc aacctgatca cccggtcggg cggcgatgcc
      721 aagcgcgtgc agcaggccgt cgatcaggcc gtcgcgaagc tgcccaaggt ctcgggcggc
      781 aacagccagg tctatgtcga tccctcgatg gtgcgcgtgc tggacgaggc cgaaaaggtc
      841 gccaagaagg cgggtgacag cttcgtgccc gccgaacgga tcctgatggc gctggcgatg
      901 gtgaacacca acgccaagga cgcgctggag gccggatcgg tcaaggcgca gaacctcaac
      961 gcagcgatca acgacatccg caaggggcgc acggccgaca gtgccagcgc cgaagacagc
     1021 tatgaggcgt tggagaaata cgcccgcgat ctgacccagg ccgcgcgcga cggcaagatc
     1081 gacccgatca tcggccggga cgaggaaatt cggcgcgcga tgca
//
LOCUS       DTVW01000690            1757 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1842880, whole
            genome shotgun sequence.
ACCESSION   DTVW01000690 DTVW01000000
VERSION     DTVW01000690.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1757)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1757)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1757
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1842880"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            321..1484
                     /locus_tag="EYO87_09145"
     CDS             321..1484
                     /locus_tag="EYO87_09145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008167683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
                     /protein_id="HIC66143.1"
                     /translation="MDFDLTEEQRAIRDAVARICSRFDDAYWLERERTGTFPEDFAAE
                     IAKGGFYGVTMEEQYGGSGLGITEASLVMQEIGRYGAAASSAVHINIFGLQPVVGFGT
                     DEQKARMLPPLIRGEHRSCFGVTEPDAGLDTTHISTFARRREDGGYVVNGRKVWTSTA
                     QRADHILLVTRTTPIEDCERPTDGMSVFYTDFDRSKIDVHEIAKMGRKAVDSNAIFID
                     GLEVPEEDRIGAEGEGFKVLLHGLNAERIIVAAAAVGFGMYVLEKAAAYARERVVFDR
                     PIGQNQAIQHPLASVWMRLQAAELMTYKAATLYDQGKPCGLEANTARNLAGSAAYEAA
                     FRAVRTHGGFGFAQEYHVERYFRESVLNFIAPVSEELILSYVAEKALGMPKSY"
     gene            complement(1569..>1757)
                     /locus_tag="EYO87_09150"
     CDS             complement(1569..>1757)
                     /locus_tag="EYO87_09150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009506052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
                     /protein_id="HIC66144.1"
                     /translation="YATEMAVEIAGKAVQIHGGNGITKEFPVERHFRNAKVMPIPDGT
                     TEIQKLVIGRNLTGLNAF"
BASE COUNT          324 a          553 c          555 g          325 t
ORIGIN      
        1 gctgcgcgac cacaccggca tgacggatct gtcgggcgac cagatcatca ccatcgttcg
       61 ggccgacatc gccaccgcgc acctgttggg catcaccctc agcgagccgg tggcccatgt
      121 ggtctcgcgc ttgttcgatc ccgaaggccg cccggtcatg gctcacctcg tgcagatccg
      181 cagcgacgtc ttttccgccg agcgccagtt cggcaatctc gccacaggag atcccggctc
      241 ctggcgcccg catatggcgg aacccgcccc gcccgagcat tcgggcgaac cacacccacg
      301 tcagaagaag gagtgatcgc atggatttcg atctcaccga agagcaacgg gccatccgcg
      361 acgcggtggc caggatctgc tcgcgtttcg acgatgccta ctggctggaa cgcgaacgaa
      421 ccgggacctt ccccgaagat tttgcggccg agatcgcaaa gggcggtttc tatggcgtca
      481 cgatggaaga gcagtatggc ggatcgggcc tgggtatcac agaggcatcg ctggtcatgc
      541 aggagatcgg gcgttacggc gcggcggcca gttccgcggt gcatatcaat atctttgggc
      601 tgcaaccggt ggtcggcttc ggcaccgacg aacagaaggc tcgaatgctg ccgcctctga
      661 tccgcggaga gcaccgctcc tgcttcggcg taaccgaacc ggacgccggc cttgatacca
      721 cgcatatctc gacctttgcg cgccgacgcg aagacggtgg gtatgtggtc aacgggcgca
      781 aggtctggac ctcgaccgca cagcgcgcag atcacatcct gctggtgacc cggaccacgc
      841 ccatcgagga ctgcgagcga ccgaccgacg gcatgtcagt gttctacacc gatttcgacc
      901 gcagcaagat cgacgtgcat gaaattgcca agatgggccg caaggcggtc gactccaacg
      961 ctatcttcat tgatgggctg gaggtgcccg aagaggaccg catcggcgcg gaaggtgagg
     1021 gtttcaaggt cctgctccac gggctgaatg ccgagcggat cattgtcgcc gcggctgcgg
     1081 tcgggtttgg gatgtacgta ctggaaaagg cggccgccta tgcgcgcgaa cgcgtcgtct
     1141 tcgaccgtcc aatcggccag aaccaggcga tccagcatcc gctggcctcg gtgtggatgc
     1201 gccttcaggc ggcggaactg atgacctaca aagccgccac gctttacgat cagggcaagc
     1261 cctgcgggct ggaggccaat accgcgcgca acctcgccgg ctcggcggcc tacgaagcgg
     1321 cattccgcgc ggtgcgcacc cacggcggct ttggcttcgc gcaggaatac cacgtcgagc
     1381 gttactttcg cgaaagcgta ctgaacttca tcgcgccggt cagcgaggag ttgatcctct
     1441 cctacgtggc cgagaaggca ttggggatgc ccaagtccta ctgactcttc gcccgtatcg
     1501 cgatcactcc gggtcgtgcc caccctcgac gctgacgagc gccgacggtg gggcggccaa
     1561 ggcccttttc agaacgcgtt aagcccggtc aggttgcgcc cgatgaccag tttttggatt
     1621 tcggtggtgc catcgggaat cggcatgacc tttgcattgc ggaagtgccg ttcaacgggg
     1681 aactctttgg tgatgccgtt gccgccgtgg atctgcaccg ctttgccggc gatttcgacg
     1741 gccatttcgg ttgcata
//
LOCUS       DTVW01000691            1293 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1845033, whole
            genome shotgun sequence.
ACCESSION   DTVW01000691 DTVW01000000
VERSION     DTVW01000691.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1293)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1293)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1293
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1845033"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1176
                     /locus_tag="EYO87_09155"
     CDS             <1..1176
                     /locus_tag="EYO87_09155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme biosynthesis protein HemY"
                     /protein_id="HIC66145.1"
                     /translation="TAMLLAQKAYALKPRHKEIQDTLLDLEMKQGDWKGARLMLKEKR
                     RQGELPQDVHIRRDAVMALQEASAVLAQGNSISAREAAISANRASPDLIPAAVLAARS
                     YIAQKDGRNAARVLEKTWSVRPHPDIAATYAEIAPDETAAARLKRFERLIGKNPDHEE
                     SRLLKAELLLSAEDFPGARRALGDLAEVHPTVRTLSIMAAVERGEGADDSVVRGWLAR
                     ALTASRGPQWVCDKCHNVMRDWAPTCDSCGGFDTLTWREPDDRDRGVSPGSGAEMLPL
                     LVGAPKPQPETPDPAAPLAGAQIDEPSAPAADQGAAVMSPRPKRTEVADVAPGMVPRE
                     SDYVEVGPVSTVNADGPAPAAAKTAAPGRDADREPVRPDVEPPEDAEWTEERPVRKS"
BASE COUNT          226 a          436 c          457 g          174 t
ORIGIN      
        1 accgcgatgc tgctggcgca gaaagcctat gccctgaaac cgcggcacaa ggaaatccag
       61 gatacgctgc tggacctgga gatgaagcag ggcgactgga agggcgcgcg cctgatgctg
      121 aaggaaaagc gccgccaagg cgaattgcct caggacgtgc atatccgccg cgatgcggtt
      181 atggcgctgc aagaggccag tgcggtgctg gcacagggca attcgatcag cgcccgcgag
      241 gcggcgatct cggccaacag ggcctcgccc gacctgatcc cggccgctgt gctggccgcg
      301 cgcagctata tcgcgcagaa ggacggccgc aatgccgcgc gcgtgctgga aaagacctgg
      361 tcggtcaggc cgcatcccga catcgccgcc acctatgcag aaattgcccc cgacgagacg
      421 gctgccgccc ggctgaaacg gttcgagcgg ctgatcggga agaaccccga tcacgaggaa
      481 tcgcgacttc tgaaggccga attgctgctg tcggccgagg attttccggg cgcgcggcgg
      541 gcccttggcg atctggccga ggtccacccc acagtgcgca ccctgtcgat catggccgcg
      601 gtcgaacgcg gcgagggcgc cgatgacagc gtggttcggg gctggctggc gcgggcgctg
      661 accgcctcgc gcgggccgca atgggtctgc gacaagtgtc acaacgtgat gcgcgactgg
      721 gcgccgacct gcgacagttg cggcggtttc gacacgctga cctggcgcga gccggatgac
      781 cgcgatcggg gcgtttcgcc cggttccggg gccgagatgc tgccgcttct ggtcggcgcg
      841 ccaaagccgc agcccgaaac gccggacccc gccgcccccc tggccggggc gcagatcgac
      901 gaaccctctg cccccgccgc cgatcagggc gccgccgtca tgtcgcccag accgaagcgc
      961 accgaggtcg ctgacgtggc gccgggaatg gtgccgcgcg aaagcgatta cgtcgaggtc
     1021 gggccggtca gcacggtcaa tgccgacgga ccggcgccgg cggccgcgaa gacggctgcc
     1081 cccggtcggg atgccgatcg cgaacccgtc aggcccgatg tcgagccgcc cgaggacgcg
     1141 gaatggaccg aggagcggcc ggttcgcaaa agctgattcg atggcccgag gatgggcggc
     1201 gaaaaaacgc gccgcccctc tttcgcgccc cgtcggaacc tgctatccgg cccgccacca
     1261 gatgccggtg tagctcagct ggtagagcac gtc
//
LOCUS       DTVW01000692            2510 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1845678, whole
            genome shotgun sequence.
ACCESSION   DTVW01000692 DTVW01000000
VERSION     DTVW01000692.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2510)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2510)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2510
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1845678"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..189
                     /locus_tag="EYO87_09160"
     CDS             <1..189
                     /locus_tag="EYO87_09160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014950431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66146.1"
                     /translation="KGADIASLSPYLTKYVSHVFALGKDAHLFEKSFAHTTRVATIRW
                     NRCWPNGNARSASITTMA"
     gene            186..884
                     /locus_tag="EYO87_09165"
     CDS             186..884
                     /locus_tag="EYO87_09165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66147.1"
                     /translation="MIDLRVLSFDPTDSRQIAQAILDEGTLLINQLNDVAREDSLRYA
                     RTELDDALARLKQARQAVSEFRNRHQLVDPSADVQGQVGVVTSLNQQLAEELVSLGML
                     QANAQANDPRIEQTQLRINVIRDQIDAERRKFGSDSESGEVLSDIVGQYESLSIDRQF
                     AEQTYTAALAAYDTARAEANRQSRYLAAYVKPTLAQEAEYPERAKLLLILGGFLMLLW
                     VIGVLIYYSLRDRR"
     gene            881..1561
                     /locus_tag="EYO87_09170"
     CDS             881..1561
                     /locus_tag="EYO87_09170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017929931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIC66148.1"
                     /translation="MIRLENLTKIYSLDGRNKTVADRINATFPTGVSVGLLGRNGAGK
                     SSLLRMISGAMLPTSGRILSNGRISWPVGFTGSFNKELTGEQNTRFVARVYGVDTEEM
                     SAFVEDFAELGEHFHLPIRTYSSGMRARLAFGMSMAVPFDTYLVDEVSAPGDAAFKAK
                     SMRVFAARMASAGALVVSHSMGQMRNMCEAGAVLENGRLSYFHDIEDAIAAHLENMDS
                     TRPHRARK"
     gene            1662..>2510
                     /locus_tag="EYO87_09175"
     CDS             1662..>2510
                     /locus_tag="EYO87_09175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002811084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HIC66149.1"
                     /translation="MKIIVLGGDGFCGWPTSLHLSARGHDIIIVDNLSRRKIDVELEV
                     ASLTPIRPLGERVRAWRDLTGRAIRVENFTVGKHYHRLLTLLRDERPDAVIHFAEQRA
                     APYSMKSSWHKRYTVNNNLNATNDVLAAIVESGQDIHLVHLGTMGVYGYGTAGMKIPE
                     GYLDVVVETENGPHRQEILYPANPGSIYHMTKTQDQLFFFYYNKNDGVRITDLHQGIV
                     WGTQTEETRIDDRLINRFDYDGDYGTVLNRFLMQAAIGYPLTVHGTGGQTRRSLTDQD
                     LRKVIPA"
BASE COUNT          512 a          773 c          770 g          455 t
ORIGIN      
        1 aaaggcgctg atatagccag cctctcgcct tatctaacta aatatgtatc gcacgtgttt
       61 gctttgggca aagatgcaca cctgtttgaa aagagttttg cgcatacaac tcgtgtggca
      121 acgattcgct ggaatcgctg ctggccgaat gggaacgcaa ggtccgcgtc tattacgaca
      181 atggcatgat cgacctgcgg gtgctgtctt tcgatcccac cgattcccgg cagatcgcgc
      241 aggccatcct tgatgaggga acgctgctga tcaaccagtt gaacgatgtc gcccgcgagg
      301 attcgctgcg ctatgcccgc accgaactgg atgacgcgct ggcgcggctg aaacaggcgc
      361 ggcaggcggt cagcgaattc cggaaccgcc accagctggt cgatccttcg gccgatgtgc
      421 agggccaggt cggtgtcgtg acctcgctga accaacaact ggcggaagaa ctggtctcgc
      481 tggggatgct gcaagccaat gcgcaggcga acgatccccg gatcgagcag acccagcttc
      541 gcatcaacgt catccgcgac cagatcgacg ccgagcgccg gaaattcggc tcggacagcg
      601 aatcgggcga ggttctgtcc gatatcgtgg ggcaatatga atcgctgtcg atagaccggc
      661 aattcgccga acagacctat accgccgcgc tggccgccta tgacaccgcc cgcgccgagg
      721 cgaaccggca atcgcgatac ctggcagcct atgtgaaacc gacgctggcg caagaggcgg
      781 aatatcccga acgcgccaag ctgctgctga tcctgggcgg gttcctgatg ctgctctggg
      841 tcatcggcgt gctgatctat tacagcctgc gcgaccggcg atgatccggc tggagaacct
      901 gaccaagatc tattcgctgg acggccgcaa caagactgtc gcggaccgga tcaacgccac
      961 ctttccaacc ggcgtctcgg tcgggttgct ggggcggaac ggagccggca aatcctcgtt
     1021 gctgcggatg atctcggggg cgatgctgcc cacctcgggg cggatccttt ccaatggcag
     1081 gatcagctgg ccggtcggct ttaccgggtc cttcaacaag gaactgacgg gcgagcagaa
     1141 cacccgcttc gtggcccgcg tctatggcgt cgataccgag gaaatgagcg ccttcgtcga
     1201 ggatttcgcc gaactgggcg aacatttcca tctgccgatc cggacctatt cctcgggcat
     1261 gagggcgcgg ctggcctttg gcatgtcaat ggcggtgccc ttcgacacct atcttgtcga
     1321 cgaggtctcg gccccgggcg acgccgcctt caaggccaag tcgatgcggg tcttcgcggc
     1381 ccggatggcc agcgcggggg ctttggtcgt gtcgcattcc atgggccaga tgcgcaacat
     1441 gtgcgaggcc ggcgcggttc tggaaaatgg caggctgtcc tatttccacg acatcgagga
     1501 cgccattgcc gcccatctcg agaacatgga cagcacaagg ccgcaccgcg cacgaaaata
     1561 ggcggttttg cgacggcggg atgacagggc ggccgcggca tatggcatcg cccggttgcc
     1621 cggtctaaga agcgggcgag gcgatcgcac aggggttttc catgaagatc atcgttctgg
     1681 gcggagacgg tttctgcggc tggccgacat cgctgcacct gtccgcgcgc ggccatgaca
     1741 tcatcatcgt cgacaacctg tcgcgccgga agatcgatgt cgaactcgag gtcgcaagcc
     1801 tgaccccgat ccgcccgctg ggcgaacgtg tgcgagcctg gcgggatctg accggccgcg
     1861 cgatccgggt cgagaacttt acagtaggca agcactatca tcgcctgctg acgctgctgc
     1921 gcgacgaacg tcccgacgcg gtgatccatt tcgccgaaca gcgcgccgcg ccctattcga
     1981 tgaaatccag ctggcacaag cgctatacgg tcaacaacaa cctgaacgcg accaatgacg
     2041 tgctggccgc gatcgtggaa agcggccagg acatccatct ggtccatctg ggcacgatgg
     2101 gcgtctacgg ctacggcacc gccggcatga agatccccga gggctatctg gacgtggtgg
     2161 tcgagaccga aaacggcccg caccgccagg aaatcctcta tcccgccaat ccgggcagca
     2221 tctaccacat gaccaagacc caggatcagc ttttcttctt ctattacaac aagaacgacg
     2281 gcgtcaggat caccgatctg catcagggga tcgtctgggg cacccagacc gaggaaaccc
     2341 gcatcgacga tcggctgatc aacaggttcg actacgacgg cgattacggc acggtgctga
     2401 accggttcct gatgcaggcg gcaatcggat atccgctgac ggtccacggc accggcggcc
     2461 agacccgccg ctctttaaca gatcaggatc tgcgcaaggt gatccccgca
//
LOCUS       DTVW01000693            2036 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1848961, whole
            genome shotgun sequence.
ACCESSION   DTVW01000693 DTVW01000000
VERSION     DTVW01000693.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2036)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2036)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2036
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1848961"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            25..849
                     /gene="prmC"
                     /locus_tag="EYO87_09180"
     CDS             25..849
                     /gene="prmC"
                     /locus_tag="EYO87_09180"
                     /EC_number="2.1.1.297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010396833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HIC66150.1"
                     /translation="MKLSQARRAAAAALRAAGIEGGARDADRILAAILGFAPQRLRLV
                     DDRDLNPVEIARLDRDIAARAARQPVAQIVGFRDFYAHRFRVTRDTLDPRPETETLVR
                     AALDLPWRNLLDMGTGTGAILISLLAARPGTAGTGTDISQAALDVARTNAQMNGVPAS
                     FMRADWYDGIVGRFDLIVSNPPYLALHEMDDLAPDVRQWEPHCALTDGGDGLAAYRII
                     AAGAADRLTEGGHVLVEIGPAQGPDVAGLFREAGAQTRLIRDLDGRDRVVLAGFQP"
     gene            1102..1899
                     /locus_tag="EYO87_09185"
     CDS             1102..1899
                     /locus_tag="EYO87_09185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011747235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4167 domain-containing protein"
                     /protein_id="HIC66151.1"
                     /translation="MRSSKSRSRNKSNRQRSLGNIVNRVFDSSGPEGKVRGTPQQIIE
                     KYLTLARDAQLSNDRVAEQSFLQHAEHYTRMLGEAQREMAERQNQHQQNNPHHQQNRQ
                     GGDDEQGRDAQNRDSGRGEATPQQNGRDHAGRDRDQNQRDGHPPRDHAQSESESVPDR
                     RADAPATTETSVESVTRKSPGRNRRAAPPESGDGLPDAVGAGEDDKTGPVETPEAGAA
                     KPARSRAPRGTARAPATRSRRKPAAEPDEGVAVPQGGQNAAPEENQS"
BASE COUNT          353 a          696 c          695 g          292 t
ORIGIN      
        1 ggcggcgcgg ctggccgccg aagcatgaaa ctgtcgcagg cccggcgcgc ggccgcggcc
       61 gcgctgcgtg ccgccggtat cgagggcggc gcgcgcgatg ccgatcgcat ccttgccgcc
      121 atcctgggat tcgcgccgca gcgtttgcgc cttgtcgacg accgcgatct gaacccggtc
      181 gagatcgcgc gtcttgatcg tgacatcgcc gcccgcgccg cgcggcaacc ggttgcgcag
      241 atcgtgggct ttcgcgactt ctacgcccat cgcttccggg tcacccgcga cacgctggac
      301 ccacgccccg agaccgaaac cctggttcgg gcggcgctgg atctgccgtg gcgcaacctg
      361 ctggacatgg gcaccggcac cggcgcgatc ctgatctcgt tgctggcggc acggcccggc
      421 acggcaggga cgggcaccga catttcccag gccgcgcttg acgtggcgcg gaccaatgcc
      481 cagatgaatg gcgtgccggc atcgttcatg cgggccgact ggtatgacgg cattgtcgga
      541 cgtttcgacc tgatcgtgtc gaacccaccc tatcttgcgc tgcacgagat ggacgatctg
      601 gcccctgatg tccggcagtg ggagccgcat tgcgccctga cagatggcgg cgacgggctg
      661 gccgcctatc gcatcattgc cgccggggcg gcggaccgac tgaccgaggg tggacatgtt
      721 ctggtcgaaa tcgggcctgc ccaggggccc gatgtcgccg gcctgttccg cgaggccggg
      781 gcgcaaaccc gcctgatccg cgatctggat gggcgggatc gtgtcgttct ggccggtttc
      841 cagccctgaa acggcaggtt gtcgcgattt tgcgggaaat cggacaagtt ttcccttgta
      901 tcggccggtc gcgcatggtt agtcggcatc gtgccggggc cgacaagcca ccgcacgggt
      961 cagcctgaca cagccgaaac cgactggcgc gcgccgcgtg ccgtcaggtg caaggccggg
     1021 ttgaacggta tggcgtcttt cgccgcagat gccgcccgca acgccgtcca gaccaaactg
     1081 gaaccactga cagacagagt gatgagatca tcgaaatccc gttcgcgcaa caagtcgaac
     1141 cgccagcgtt cgctgggcaa tatcgtaaac cgcgtctttg acagctcggg tcccgagggc
     1201 aaggtgcgtg gcacgcccca gcagatcatc gagaaatatc tgacactggc gcgcgatgcc
     1261 cagctgtcca acgaccgcgt ggccgagcag agctttctgc aacatgccga acactacacg
     1321 cggatgctgg gcgaggcgca gcgcgagatg gccgagcgcc agaatcagca ccagcagaac
     1381 aatccgcatc atcagcagaa ccgccagggc ggcgatgacg agcagggtcg cgatgcgcag
     1441 aatcgcgatt ccggtcgcgg cgaagcgacg ccgcagcaga atggccgcga tcatgccggc
     1501 agggaccgcg atcagaatca gcgcgacggc caccccccgc gcgatcacgc gcagtcagag
     1561 agcgaatcgg tcccggatcg gcgcgccgat gcccctgcca cgaccgaaac ttcggtggaa
     1621 tcggtcacgc gtaaatcgcc cggtcgtaac cgccgagccg cgccgcctga atccggcgat
     1681 ggcctgcccg atgccgtggg tgccggcgaa gacgacaaga ccggaccggt cgagacgccc
     1741 gaggccggcg ctgcaaagcc ggcccggtcg cgggcaccgc gcggcaccgc ccgcgcaccc
     1801 gcgacgcgca gtcgccgcaa gcccgccgcc gagccggacg aaggcgtcgc ggttccccag
     1861 ggcggccaga atgcggcacc cgaggaaaac cagtcctgat ccacacccgg agcccgtccg
     1921 cgcgcggcgc tgcggcccac cggggcggct ggatcggcag gtcggcggat cctcgagtgt
     1981 ggctcgacgg cgcagcgccg gccgtgaccg gattgcgcga atagaccttg ggtcga
//
LOCUS       DTVW01000694            3268 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1849071, whole
            genome shotgun sequence.
ACCESSION   DTVW01000694 DTVW01000000
VERSION     DTVW01000694.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3268)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3268)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3268
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1849071"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..974)
                     /gene="fliI"
                     /locus_tag="EYO87_09190"
     CDS             complement(<1..974)
                     /gene="fliI"
                     /locus_tag="EYO87_09190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008027521.1"
                     /note="involved in type III protein export during
                     flagellum assembly; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellum-specific ATP synthase FliI"
                     /protein_id="HIC66152.1"
                     /translation="MDKIESIVARIRNLRPAQYYGQVQQMRAGLISVEGLNGHASVGD
                     RVLISLQKGCVAGEIVGLAPDVCDVLPEGNADGLSVGAEVELLFAPTIAPCDSWIGRI
                     IDPLGRPLDNRPLPKGLQPRPFRCEAPPAVGRKRLGARLATGLAVFDTLLPLVAGQRI
                     GLFAGSGVGKSTLLSNLARGVEADVVVIALIGERGRELREFVEKTLGTEGMKRAVIVT
                     ATSDRSPLIRRRCAWAAMAVAEHFRDQGRHVLLLADSITRFAEAHREIALAAGEPPSY
                     RGFPPSVSNLIMALAERAGPGLDGSGDITGIFSVLVAGSDMEEPVADIL"
     gene            1073..1459
                     /locus_tag="EYO87_09195"
     CDS             1073..1459
                     /locus_tag="EYO87_09195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FlgB family protein"
                     /protein_id="HIC66153.1"
                     /translation="MFDNIEMMRMARAMGQNAAQRQTLVARNVANADTPGYKAQDLEP
                     FEEGYRRTGFATMRTTDPRHMATPEWSPAAMRAFSKTSGTSPNGNSVSLEDEMVKAAE
                     LKRDHDLSLGIYRSALNLMRTSIGRR"
     gene            1471..1863
                     /gene="flgC"
                     /locus_tag="EYO87_09200"
     CDS             1471..1863
                     /gene="flgC"
                     /locus_tag="EYO87_09200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010399360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod protein FlgC"
                     /protein_id="HIC66154.1"
                     /translation="MSDPVSPLQLSASGMRAQSERLRRTAENIANTDTPGYRRKLVAF
                     EEAVRFGRPTGEVQTSRTLLDQSELPQIYDPSNPLADQDGYYLGSNVDLVIEIADSRE
                     AGRSYEANLKMFEQSRQMGSSLLELLRR"
     gene            1875..2159
                     /locus_tag="EYO87_09205"
     CDS             1875..2159
                     /locus_tag="EYO87_09205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-basal body protein FliE"
                     /protein_id="HIC66155.1"
                     /translation="MINSLNAANAYSAARSAVAPGQSSPAIEKISQAAEDFALQMSQV
                     DAASTGAMTGSVETQQLVQTIAESELAMETVVAIRDKVVEAYQEILRMPV"
     gene            2163..2429
                     /locus_tag="EYO87_09210"
     CDS             2163..2429
                     /locus_tag="EYO87_09210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011909552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthetic protein FliQ"
                     /protein_id="HIC66156.1"
                     /translation="MGETLLFDMMRQALLIAVRISAPMLGVALVAGVVIGLFQALTSV
                     QELTLTFVPKVGLMLIVFWVTMSFMTTALSDFYLGQIIPLIAGG"
     gene            2433..3149
                     /locus_tag="EYO87_09215"
     CDS             2433..3149
                     /locus_tag="EYO87_09215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-basal body complex protein"
                     /protein_id="HIC66157.1"
                     /translation="MENAIYASLTRQSGLMKEMRVVANNIANANTTGYRREGVIFAEN
                     LSALDRNGDTLSMADARGRMLDLKQGVLTQTNGNLDLAIEGDGFFMVETPDGPRLTRA
                     GAFLPSAEGELMTADGNRLLDEGQAPIILPAGAGKVAVGADGTMSANGAPFARIGVFD
                     APEGSDLTRQGGTLFALDGDAEPVEAPRIQQGFLEESNVDPVFEISRMIEVQRAYELG
                     QSFLDREDQRIRNAISAMTR"
     gene            3161..>3268
                     /gene="flgG"
                     /locus_tag="EYO87_09220"
     CDS             3161..>3268
                     /gene="flgG"
                     /locus_tag="EYO87_09220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_354408.1"
                     /note="makes up the distal portion of the flagellar basal
                     body rod; Bradyrhizobium has one thick flagellum and
                     several thin flagella; the Bradyrhizobium protein in this
                     cluster is associated with the thick flagella; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod protein FlgG"
                     /protein_id="HIC66158.1"
                     /translation="MRALQIAATGMSAQQTRVEVISNNLANMSTTGYNAR"
BASE COUNT          648 a         1069 c          989 g          562 t
ORIGIN      
        1 aggatgtcgg ccaccggttc ttccatatcg gacccggcga ccaagacgct gaaaatgccg
       61 gtgatatcgc cgctgccgtc gaggccgggg ccggcgcgtt cggccaaagc catgatcagg
      121 ttcgacaccg agggtggaaa gccgcgatag cttggcggct cgcccgcagc cagggcgatc
      181 tcgcgatggg cctcggcaaa acgggtgatc gaatcggcca gaagcaggac atggcggccc
      241 tggtcgcgaa aatgttcggc aaccgccatc gcggcccagg cacagcgcct gcgaatcagt
      301 ggcgagcgat ccgaagtcgc cgtcacgatc acggcccgct tcatcccttc ggtgccaagt
      361 gttttttcaa caaattcgcg cagttcccgt ccccgttcgc cgatcagggc gatcaccacg
      421 acatcggctt ctaccccacg tgcaagattc gaaagcaggg tggacttgcc cacgcccgac
      481 cccgcgaaaa gcccgatccg ctggccggcg accaagggca gcagcgtgtc gaagaccgcc
      541 agcccggtcg ccaggcgcgc acccagccgc ttgcggccga ccgcgggcgg cgcctcgcag
      601 cggaacggcc gcggctgaag ccccttgggc agcggcctgt tgtccagcgg ccgacccaga
      661 gggtcgatga ttcgcccgat ccacgaatcg cagggcgcga tggtcggcgc gaacagcagc
      721 tcgacctcgg ccccgaccga aaggccgtcg gcattgcctt cgggcagcac gtcgcaaaca
      781 tccggtgcaa gaccgacgat ctctccggcg acacaacctt tctgaagcga aatcaatacc
      841 ctgtctccga ccgaggcatg gccgttcaat ccctcgacgg aaatcagccc ggcgcgcatc
      901 tgctgcacct gcccataata ctgcgccgga cgcagattcc ggattcgggc gacgatcgat
      961 tcaatcttat ccatttcgcg gctttctccg tcagcggcaa ttcctgcctg tgaaacggtt
     1021 tctaaaccaa ttggggttaa gaccgggtta tcgccgaatg aggagaagcc tcatgtttga
     1081 taacatcgag atgatgcgaa tggcccgcgc catgggtcag aatgccgccc agcggcagac
     1141 acttgtggca cgcaatgtcg cgaatgccga caccccggga tacaaggccc aggatctgga
     1201 gcccttcgag gaaggatatc ggcgcacagg cttcgccacg atgcgcacga cggatccgcg
     1261 ccatatggcc acgcccgagt ggtcgccggc cgcgatgcgc gccttctcca agacaagcgg
     1321 aacctcaccc aacggcaatt cggtctcgct ggaggacgag atggtgaaag cggccgaact
     1381 gaagcgcgat cacgatctgt cgctgggaat ctaccgttcc gccctgaacc tgatgcgcac
     1441 cagcatcggc cgccgctgaa ggaaaaaccc atgtccgacc ccgtctcgcc cctgcagctt
     1501 tcggcctcgg gaatgcgcgc gcaaagcgaa cgcctgcgcc gcaccgcgga aaacatcgcc
     1561 aataccgata cgcccggcta tcgccgaaag ctggtcgcct tcgaagaggc cgtccgtttc
     1621 ggccgcccga ccggagaggt tcagacctcg cgaacgctgt tggaccagtc cgaactgccg
     1681 cagatctatg atccgtcaaa cccgcttgcg gaccaggacg gttattacct cggatcgaac
     1741 gtcgatctgg tcatcgagat cgccgattcc cgcgaagccg gccgcagcta cgaggccaat
     1801 ctgaagatgt tcgaacagag ccgacagatg ggctcttcgt tgcttgaact tcttcgccgc
     1861 tgaaaggata ttccatgatc aacagcctga acgccgccaa tgcctattcc gccgcccgca
     1921 gcgccgtggc gcctggacaa tcgtcaccgg ctatcgagaa aatctctcag gcggccgagg
     1981 atttcgccct ccagatgtcg caggtcgacg ccgcctcgac cggcgccatg accggctcgg
     2041 tcgagaccca gcagcttgtc cagaccatcg ccgagtccga actggcgatg gaaacggtcg
     2101 tcgccattcg cgacaaggtc gtcgaggcct atcaggaaat cctgcggatg ccggtctgag
     2161 ccatgggcga aactctgctt ttcgacatga tgcgccaggc gctgctgatc gcggtgcgga
     2221 tttctgcccc gatgctgggt gtcgcgctgg tcgcgggcgt cgtcatcggc ctgttccagg
     2281 ccctgacctc ggtgcaggaa ctgacgctga ccttcgtgcc caaggtcggg ctgatgctga
     2341 tcgtcttctg ggtcacgatg agcttcatga ccaccgcgct gtccgatttc tatctcggcc
     2401 agatcatccc cctgatcgcc ggaggctgat ccatggaaaa tgccatctac gcctctttga
     2461 cccggcaatc gggcctgatg aaggaaatgc gcgtggtcgc gaacaacatc gccaatgcga
     2521 acacgaccgg atatcgccgc gaaggggtga tcttcgccga gaatctgtct gcgctggacc
     2581 gcaatggcga tacgctttcg atggcggatg cgcgcggccg gatgctggac ctgaagcagg
     2641 gcgtgctgac gcaaacgaat ggcaacctgg atctcgccat cgagggcgat ggctttttca
     2701 tggtcgaaac ccccgacggg ccgcgcctga cccgcgccgg cgccttcctg ccatcggctg
     2761 aaggcgaatt gatgacggcc gacggcaacc ggctgctgga cgagggccag gcgccgatca
     2821 tcctgcccgc cggtgcggga aaggtcgccg tcggcgccga tggcacgatg tccgcgaatg
     2881 gtgcgccctt tgcccggatc ggcgtgttcg atgcgccgga aggttccgac ctgacccgtc
     2941 agggcggaac cctctttgca ctggatggcg atgccgagcc tgtcgaggca ccgcgcatcc
     3001 agcaagggtt tctcgaggaa tccaacgtcg atccggtgtt cgagatttcc cgcatgatcg
     3061 aagtccagcg cgcctacgag ctgggccagt cctttctgga tcgcgaggac cagcggatcc
     3121 gtaacgcgat ctctgccatg acacgctgag aggaaacagc atgagagccc tgcaaatcgc
     3181 cgcaaccggc atgagcgcgc agcagacgcg ggtcgaggtc atctcgaaca atctcgcgaa
     3241 catgtccacc accggctaca atgcccgg
//
LOCUS       DTVW01000695            1337 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1849720, whole
            genome shotgun sequence.
ACCESSION   DTVW01000695 DTVW01000000
VERSION     DTVW01000695.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1337)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1337)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1337
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1849720"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..338)
                     /gene="crcB"
                     /locus_tag="EYO87_09225"
     CDS             complement(<1..338)
                     /gene="crcB"
                     /locus_tag="EYO87_09225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_351792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fluoride efflux transporter CrcB"
                     /protein_id="HIC66159.1"
                     /translation="MMNPFLQVALGGAAGATARYSVYRAIAWHGPGFPVATGVVNVVG
                     SFAMGILTIALAQRFGNHYAPLLLTGFLGGFTTFSAFSLDALTLWERGQAAGMIVYVL
                     VSVMLSLAAV"
     gene            complement(370..>1337)
                     /locus_tag="EYO87_09230"
     CDS             complement(370..>1337)
                     /locus_tag="EYO87_09230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_351791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="replication-associated recombination protein A"
                     /protein_id="HIC66160.1"
                     /translation="VDEIHRFNKAQQDSFLPHMEDGTILLVGATTENPSFELNAALMS
                     RAQVIVLERLGQADLERLTQRAEAELGRKLPLTAQAREALLDMADGDGRAALNLVEQV
                     AAWKTAAPVDAQAMAKRLMKRAAKYDKSGDEHFNLISALHKSVRGSDPDAALYWLARM
                     LEGGEDPRYLARRITRMAIEDIGLADPAAQRHCLDAWALFERLGSPEGELALAQAVIY
                     LALAPKSNAGYGAYKAARAEARRTGSLMPPAHILNAPTAMMKEQGYGAGYAYDHDAED
                     GFSGQNYFPEGMKRPVLYVPVERGFERDLKKRLDWFVAQRLKRGG"
BASE COUNT          238 a          462 c          417 g          220 t
ORIGIN      
        1 atcaccgccg ccagcgacag catgaccgag acaaggacat agacgatcat gcccgccgcc
       61 tgcccgcgtt cccacagcgt cagcgcgtcc agcgagaagg ccgaaaaggt ggtgaacccg
      121 cccagaaagc cggtcagcag aagcggcgca taatggttgc cgaaccgctg cgccagcgcg
      181 atggtcagaa tgcccatggc gaagctgcca acgacgttga cgacgcccgt cgccaccggg
      241 aaacccggcc cgtgccaggc aatcgcacga tagaccgaat agcgggcggt cgcgcccgca
      301 gcgccgccaa gggccacctg aaggaaggga ttcatcatcg cgccctcctg tgccggaagc
      361 cgcccaaagt caaccgccgc gcttcagccg ctgggcgacg aaccagtcca gccgcttctt
      421 cagatcgcgc tcgaatccgc gttcgaccgg aacatagaga accggccgtt tcatgccctc
      481 ggggaaatag ttctggccgc tgaacccgtc ctcggcatcg tggtcatagg catagccggc
      541 gccatagccc tgttccttca tcatcgctgt cggcgcgttc aggatatggg cgggcggcat
      601 cagactgccg gttcgcctgg cctcggccct cgcggccttg taggcgccgt atccggcatt
      661 ggatttcggc gccagcgcca gatagatcac cgcctgcgcc agcgccagtt cgccctcggg
      721 actgcccagc cgttcgaaaa gagcccatgc gtcgaggcag tgacgctgtg cagccggatc
      781 ggccagcccg atatcctcga tcgccatgcg ggtgatgcgg cgggccagat agcgcggatc
      841 ctcgccgccc tccagcatcc gcgccagcca gtagagcgcg gcatccggat cgctgccgcg
      901 aacggatttg tgcagggccg aaatcaggtt gaaatgttca tcgcccgact tgtcgtattt
      961 cgccgcgcgc ttcatcagcc gtttggccat ggcctgggca tcgacgggcg cggcggtctt
     1021 ccacgcggcc acctgttcga ccaggttcag cgccgcacgg ccatcgccat cggccatgtc
     1081 cagcagggcc tcgcgcgcct gcgcggtcag cggcagcttg cggcccagtt ccgcctcggc
     1141 ccgctgcgtc agccgttcca gatcggcctg gcccagccgt tccagaacga tcacctgcgc
     1201 gcgagacatg agcgcggcgt tgagttcgaa agacgggttt tcggtcgtgg cgccgaccag
     1261 aaggatcgtg ccgtcctcca tgtgcggcag aaagctgtcc tgctgcgcct tgttgaagcg
     1321 gtggatttca tccacga
//
LOCUS       DTVW01000696            2181 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1851509, whole
            genome shotgun sequence.
ACCESSION   DTVW01000696 DTVW01000000
VERSION     DTVW01000696.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2181)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2181)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2181
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1851509"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..842)
                     /locus_tag="EYO87_09235"
     CDS             complement(<1..842)
                     /locus_tag="EYO87_09235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010395284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HIC66161.1"
                     /translation="MSNTRQANTSSRWRAPLLFLALAVLFVLEGTVRNAMFSGSWNTA
                     LGILNMGLISAITALGVNMQWGYAGLFNVGVVGFLALGGLAPVLVATAPVDGAWQAGG
                     PRILLGLALGIGTLALAAQAWKRMARGRLRGLVLLAILIAGFIAYRAIFDPAVIAIEA
                     NNPARHGNIGGLGLPVLLSWAVGGVFAAAAAWAVGKVALGLRSDYLAIATLGIGEIIV
                     AVLKNEDWLARGVKNVTSIPRPVAYEIDLQQNPAFQSFANRLSMSAAEASGIWVKISY
                     LSLFL"
     gene            complement(855..1862)
                     /locus_tag="EYO87_09240"
     CDS             complement(855..1862)
                     /locus_tag="EYO87_09240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HIC66162.1"
                     /translation="MDIANALVVFLNFVFIPAAAYGAQLALGALGVTLIYGILRFSNF
                     AHGDTMAFGTAVTILVTWGLQALGVSLGPLPTALLALPVGIAATAALALVTDRAVYRF
                     YRVQRAAPIILVMASVGVMFLMNGLTRLLIGVDEQRFADGARFVINVRDFKAMTGLQE
                     GLALKSTQALTVVVAVIVVWALFWFLNRTRSGKAMRAYSDNEDLALLSGIDPDKVVRM
                     TWIIAAGLATIAGVLYGLDKAFKPFNYFQILLPIFAAAIVGGLGSPLGAIAGGFVVAF
                     SEVAITYPWLKVVGYLFPDWQPGGLLQLLGTEYKFAVSFVILIVVLLFKPTGLFRGRS
                     V"
     gene            complement(1866..>2181)
                     /locus_tag="EYO87_09245"
     CDS             complement(1866..>2181)
                     /locus_tag="EYO87_09245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019953701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HIC66163.1"
                     /translation="AAGELSGGQRQQLAVGRALMTRPSLLMLDEPTAGVSPIVMDELF
                     DRIIAIARGGLPILMVEQNAKQAMAIADKAYVLVQGANAHTGSGKELMANDEVRRTFL
                     GG"
BASE COUNT          433 a          748 c          697 g          303 t
ORIGIN      
        1 agaaacagcg agagatagct gatcttgacc cagatgccgg atgcctcggc cgcgctcatc
       61 gacaggcggt tggcaaagct ttggaaggcc gggttctgtt gcaggtcgat ctcgtaggcg
      121 acgggtcgcg ggatcgaggt gacgttcttg acgccacggg ccagccagtc ctcgttcttc
      181 agcaccgcca cgatgatctc gccgatcccc agcgtcgcga tcgccagata atccgagcgg
      241 agcccaagcg cgaccttgcc caccgcccag gcggcggcgg cggcaaagac cccgcccacc
      301 gcccatgaca gcaggacggg caggcccagg ccgccgatat tcccgtggcg ggcggggttg
      361 ttggcctcga tcgcgatgac ggccgggtcg aagatggcgc gataggcgat gaagcccgca
      421 atcaggatcg caagcagcac caggccgcgc agccgccccc gggccatgcg cttccaggcc
      481 tgcgccgcca gcgccagcgt gccaatgccc agggcaagcc ccagcaggat gcgcgggccg
      541 cccgcctgcc atgcgccgtc caccggggcg gtcgcgacca ggaccggcgc cagcccgcca
      601 agcgccagaa agcccacgac gcccacgttg aacaggcccg catagcccca ttgcatgttc
      661 accccaagcg cggtgatggc cgagatcagg cccatgttca gaatgccgag cgcagtgttc
      721 cagctgcccg agaacatcgc gttgcgcacc gtgccctcca gcacgaacag caccgcaagc
      781 gccagaaaca gcagcggcgc gcgccagcgg ctggaggtgt tggcctgacg agtgttggac
      841 atggcgaccc ccttctagac cgacctgccg cggaacaggc cggtcggctt gaacagcagc
      901 accacgatca gaatgacgaa actgacggcg aacttgtatt cggtgcccag aagctgcagc
      961 aacccgcccg gctgccagtc cgggaacaga tagcccacca ctttcagcca tggataggtg
     1021 atcgcgacct cggaaaaggc cacgacgaaa ccgccggcga tggcgcccag cggactgccc
     1081 aggccgccga caatggcggc ggcgaagatc ggcagaagga tctggaaata gttgaagggc
     1141 ttgaacgcct tgtccaggcc gtacagcacg ccggcgatgg tcgccaggcc ggcggcgatg
     1201 atccaggtca tgcgcacgac cttgtccggg tcgatgcccg acagcagcgc cagatcctcg
     1261 ttgtcggaat aggcgcgcat cgccttgccc gaccgggtgc gattgaggaa ccagaacagc
     1321 gcccagacca cgatcaccgc gaccacgacg gtcagcgcct gcgtcgattt cagggccagg
     1381 ccctcttgca ggccggtcat cgccttgaag tcgcgcacat tgatgacaaa gcgggcgccg
     1441 tccgcgaaac gctgttcatc gactccgatc agcaaccggg tcagcccgtt catcaggaac
     1501 atcacgccga ccgaggccat gaccaggatg atcggcgccg ctctctggac gcggtagaat
     1561 cgatagaccg cccgatccgt caccagcgcc aacgcggccg tcgccgcaat cccaaccggc
     1621 agggccagca gcgccgtggg cagcggcccc agcgagacgc caagcgcctg caggccccag
     1681 gtgacgagga tggtgacggc ggtgccgaac gccatcgtgt cgccatgggc gaagttcgaa
     1741 aagcgcagga tgccatagat cagcgtcacc ccgagcgccc caagcgccag ttgcgcgcca
     1801 taggccgcgg cgggaatgaa cacgaagttc aggaacacga caagggcgtt cgcaatgtcc
     1861 atgtctcagc cccccaggaa ggtgcggcgc acctcgtcat tggccatcag ttccttgccg
     1921 gaaccggtat gcgcattggc gccctggacc agcacatagg ccttgtcggc gatcgccatg
     1981 gcctgtttgg cgttctgttc caccatcagg atcggcaggc cgccgcgcgc gatggcaatg
     2041 atgcggtcga acaattcgtc catcacgatc gggctgacac cggccgtcgg ttcgtccagc
     2101 atcagcaggc tgggtcgggt catcagggcg cggcccacgg caagctgctg gcgctggccg
     2161 cccgacaatt cgcccgccgc c
//
LOCUS       DTVW01000697            1559 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1855202, whole
            genome shotgun sequence.
ACCESSION   DTVW01000697 DTVW01000000
VERSION     DTVW01000697.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1559)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1559)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1559
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1855202"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..822)
                     /locus_tag="EYO87_09250"
     CDS             complement(<1..822)
                     /locus_tag="EYO87_09250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HIC66164.1"
                     /translation="MPVLNRIADFADQMTAWRRHLHQHPELGFDCHMTAAFVAARLRE
                     FGVDQIHEGIGRSGIVAIIEGRGDGPTIGLRADMDALPMDETTGLPHASQVAGRMHAC
                     GHDGHMTMLLGAAKYLAETRNFGGRVALIFQPAEEDGGGGDAMVREGMMDRFGISRVF
                     AMHNSPGQQTGSFQTTPGPIMAAVDRFDIHVKGQGGHGAMPHLTADPVVAAVAIVSAI
                     QTISSRNHYALDDLALSVTQIHTGSADNVVPDGAWICGTVRSFEPHVRDMVRRRMA"
     gene            885..>1559
                     /gene="mazG"
                     /locus_tag="EYO87_09255"
     CDS             885..>1559
                     /gene="mazG"
                     /locus_tag="EYO87_09255"
                     /EC_number="3.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008553496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside triphosphate pyrophosphohydrolase"
                     /protein_id="HIC66165.1"
                     /translation="MADTSSSSRRRDPQAEILRLLRIMAALRDPETGCPWDIQQDFAS
                     IAPYTIEEAHEVEDAIQREAWDELPGELGDLLLQVVFHARMAEEAGLFDFADCAAAIS
                     DKLVFRHPHVFGDESRDKSAEQQVQDWEAIKAAERAGKAEGGTLDGVALGLPALTRAI
                     KLQNRAARVGFDWPGPGDVLAKIAEETAELVEAQELSDPGAMEEEFGDLLFVMANLAR
                     HLKIDPE"
BASE COUNT          260 a          506 c          530 g          263 t
ORIGIN      
        1 cgccatacgg cggcgcacca tgtcgcggac atgcggctcg aagctgcgca cggttccgca
       61 gatccaggcg ccgtcgggca cgacgttatc cgcgctgccg gtatgaatct gcgtcaccga
      121 cagcgccagg tcgtccagcg cgtaatggtt gcggcttgaa atcgtctgga tcgcgctgac
      181 gatggccaca gccgcgacga ccggatcggc ggtcagatgc ggcatcgcac catggccgcc
      241 ctgtcccttc acatggatgt cgaagcggtc caccgcggcc atgatcgggc ccggcgtggt
      301 ctggaagctg ccggtttgct gtccggggct gttatgcatc gcaaagacgc ggctgatccc
      361 gaagcgatcc atcatgccct cgcggaccat ggcgtcgccg ccgccgccat cctcttcggc
      421 cggctgaaag atcagcgcca cccggccgcc gaaattgcgg gtctcggcca gatatttcgc
      481 cgcccccagc agcatcgtca tatggccgtc atggccacag gcatgcatcc gcccggcgac
      541 ctgcgaggcg tggggcaagc cggtcgtctc atccatcggc agcgcgtcca tgtcggcgcg
      601 caatccgatg gtcggcccgt cgccccggcc ttcgatgatg gccacgatgc cgctccggcc
      661 gatgccctcg tggatctggt ccacgccgaa ttcgcgcagt cgcgcggcca cgaaagcggc
      721 ggtcatgtgg cagtcgaagc ccagttcggg atgctgatga aggtggcggc gccacgcggt
      781 catctggtct gcgaaatcgg cgatgcggtt cagcacgggc atgtggactt gcgcctttct
      841 ctgtggcagt cggggcatct gcaccgctcg gaccgggaaa agcaatggcc gataccagtt
      901 cctcctcgcg acgtcgcgat ccccaggccg agatcctgcg cctgctgcgg atcatggccg
      961 cgctgcgcga tcccgaaacc ggatgcccct gggatatcca gcaggatttc gcctcgatcg
     1021 cgccctatac gatcgaagag gcgcacgagg tcgaggatgc gatccagcgc gaggcctggg
     1081 acgaattgcc gggcgaactg ggcgacctgc tgctgcaggt cgtctttcac gcccggatgg
     1141 cggaagaggc gggattgttc gatttcgccg attgcgcggc cgccatctcg gacaagctgg
     1201 tgttccgcca tccgcatgtc ttcggcgacg aatcccgcga caagtcggcc gaacagcagg
     1261 tccaggactg ggaggcgatc aaggccgccg agcgggccgg caaggccgaa ggcgggacgc
     1321 tggacggcgt agccctgggg ttgccggcgc tgacccgcgc gatcaagttg cagaaccggg
     1381 ccgcgcgggt gggtttcgac tggcccggtc cgggcgacgt tctggccaag atcgccgagg
     1441 agaccgccga actggtcgag gcgcaagagt tgtcggaccc gggggcgatg gaggaagaat
     1501 tcggcgatct tctgttcgtc atggccaatc tggcgcggca tctgaagatc gaccccgaa
//
LOCUS       DTVW01000698            1258 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1859785, whole
            genome shotgun sequence.
ACCESSION   DTVW01000698 DTVW01000000
VERSION     DTVW01000698.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1258)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1258)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1258
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1859785"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            10..>1258
                     /gene="priA"
                     /locus_tag="EYO87_09260"
     CDS             10..>1258
                     /gene="priA"
                     /locus_tag="EYO87_09260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HIC66166.1"
                     /translation="MRARGGVEGGVLDYLAPEDGVRQGALVLVPLGPRRVLGLVWGEG
                     RGDFDLAKLRPVARILDAEPFRPGFLDFLSRAADYTLTPPPLMLRMATRAPDLDQPPA
                     ARRLIVPAGDPPARMTEARSRVMDVIARHGGAGFAPSELAQLAGVGTSVVKGLVAQGT
                     LAEIQAPRDTPYPRLDPGRPGKPLAPDQQAAADTLRAAIRKGGYGTTLLRGVTGSGKT
                     EVYLEAVAECLRAGRQALVLLPEIALSAEFLDRVEERFGARPGEWHSGITRTERRRLW
                     HMAGRGEVGLVVGARSALFLPFHDLGLIVVDEEHDSSYKQEDVVYYSARDMAVLRASI
                     AGAHVVLASATPSLESWVNAASGKYARLDLRSRYGEAELPDMAAIDLRAEEMPAGRWI
                     SPTLEGAVKTRLARGEQSLLFLNR"
BASE COUNT          170 a          458 c          450 g          180 t
ORIGIN      
        1 cccgcgcgcc tgcgtgcccg cggcggcgta gaaggcggcg tgctggacta cctcgccccc
       61 gaagacggcg tgcggcaggg tgcgctggtg ctggtgccgc tggggccgcg ccgcgttctg
      121 ggcctggtct ggggcgaggg caggggcgat ttcgacctgg ccaagctgcg ccccgtggcc
      181 cggatcctcg atgccgaacc gttccggccg gggttcctcg acttcctcag ccgcgccgcc
      241 gactacaccc tgaccccgcc gccgctgatg ctgcgcatgg cgacccgcgc ccccgacctg
      301 gaccagccgc ccgccgcgcg ccggctcatc gtgcccgccg gcgatccgcc cgcgcgcatg
      361 accgaggcga gaagccgcgt catggacgtc atcgcccgcc acggcggcgc cggtttcgcg
      421 ccgtccgaac tggcccaact ggccggtgtc ggcacctcgg tcgtcaaggg cctggtggca
      481 caaggcacgc tggccgagat ccaggctcct cgcgataccc cctatccgcg cctcgatccc
      541 ggtcggcccg gcaagccgct ggcccccgat cagcaggccg ccgccgacac cctgcgcgcc
      601 gccatccgca agggtggcta tggcaccacc ctgctgcgcg gggtcaccgg atcgggcaag
      661 accgaggtct atctggaagc cgtcgcggaa tgcctgcgcg ccggtcgtca ggcgctggtc
      721 ctgctgcccg agatcgcgct gtcggcggaa ttcctggacc gggtcgagga gcgttttggg
      781 gcgcggcccg gcgaatggca cagcggtatc acccggaccg aacgccgccg gttgtggcac
      841 atggcgggcc ggggcgaggt cgggctggtg gtcggcgccc gctcggccct gttcctgccc
      901 ttccacgatc tgggcctgat cgtcgtcgac gaggaacatg acagcagcta caagcaggag
      961 gatgtggtct attacagcgc ccgcgacatg gcggtgctgc gcgcctcgat cgcgggggcg
     1021 catgtggttc tggcctcggc cacgcccagc ctggaaagct gggtcaacgc ggccagcggc
     1081 aaatatgccc ggctggacct gcgaagccgc tatggcgagg cggaactgcc cgacatggcc
     1141 gccatcgacc tgcgcgccga ggagatgccg gcaggacgct ggatctcgcc cacgctggaa
     1201 ggggcggtca agacgcggct ggcccgcggc gaacaatcgc tgctgttcct gaaccggc
//
LOCUS       DTVW01000699            2514 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1864785, whole
            genome shotgun sequence.
ACCESSION   DTVW01000699 DTVW01000000
VERSION     DTVW01000699.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2514)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2514)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2514
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1864785"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1212
                     /locus_tag="EYO87_09265"
     CDS             <1..1212
                     /locus_tag="EYO87_09265"
                     /inference="COORDINATES: protein motif:HMM:PF00072.22"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HIC66167.1"
                     /translation="IGDPDLRRMLASQLRDAGYAAVEKTPGDDILGWSVENRPDVVIY
                     DWIEEGGGALDFCRSFRADPRCAHSYLVMLIHGDPRDQVPRGLQAGANDFVAMPAQGA
                     NVLARLAVSERVLRIEAELRASNDRLQEALTSLEQAQEAIDRDLREARKLQQGLVRER
                     GGRFGPFEMSLLLRPAGHIGGDLVGFFPIGEDRVGIYALDVSGHGVTAALLTAQLSVH
                     LSGSSDQNVALRAAQSGSDSVRPAALAHFFNNMMLEEMCTDTYFTMIYADLNHVTGQL
                     RIVQAGHPHPVLQKGDGSVRLLGRGGMPVGVFEEPVFDEVDVMLDPGDRLLITSDGIT
                     EASNPAGRLLGDDGLEAIMRTNAFLGGHSFLEAMAWSVSQYAGGERPDDMSAVLIEYL
                     GPAKPLNLPAR"
     gene            complement(1220..1678)
                     /locus_tag="EYO87_09270"
     CDS             complement(1220..1678)
                     /locus_tag="EYO87_09270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011841931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HIC66168.1"
                     /translation="MIPRYGPPPRPASRIGHGWRRRPGAYAILIRDGWLLLTHQQAPV
                     PEFQLPGGGIDPGESPVRALHREVGEETGWTIAGPRFLSAYRRFAYMPDHDLHAEKLC
                     EIWLARPIRRLGPPSEPGHSAHWVRPAVAADLLADPGARAILSRWLKAHG"
     gene            1837..>2514
                     /locus_tag="EYO87_09275"
     CDS             1837..>2514
                     /locus_tag="EYO87_09275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_354290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp33 family molecular chaperone HslO"
                     /protein_id="HIC66169.1"
                     /translation="MSMINQIAWDDTVLPFQLDRSSIRGRVARLDGVLDHILSRHDYP
                     APVSALVAELALLTALIGPTIKLRWKLSLQVRGNGAVRTIAADFYAPASQDEPARIRA
                     WASFDADRLDASEPFAQIGEGYFAILIDQGQGTHPYQGITPLAGGSLSACAQTYFAQS
                     EQLPSRFALASGHSQLTGEPAHWRAGGVMLQTLPAQPMDAGKGGSGEGGLIEAADILQ
                     GGESEDWN"
BASE COUNT          403 a          803 c          885 g          423 t
ORIGIN      
        1 atcggcgatc cggatctgcg ccggatgctg gccagccagt tgcgcgatgc cggctatgcg
       61 gcggtcgaga agaccccggg cgacgacatt ctgggatgga gcgtcgagaa ccggcctgac
      121 gtcgtgatct atgactggat cgaggagggg ggcggggcgc tggacttctg ccgcagcttc
      181 cgcgccgatc cgcgttgcgc gcacagctat ctggtgatgc tgatccatgg cgatccgcgc
      241 gatcaggtcc cgcgcggatt gcaggccggg gccaatgatt tcgtggccat gcccgcgcag
      301 ggcgcgaatg tcctggcccg gcttgcggtc agcgaacggg tgctgcggat cgaggccgag
      361 ttgcgcgcca gcaacgatcg cctgcaagag gcgctgacat cgctggaaca ggcgcaggag
      421 gcgatcgacc gcgatctgcg cgaggcgcgc aagctgcaac agggtctggt gcgcgaacgc
      481 ggcggccgct ttggcccgtt cgagatgtcg ttgctgctgc gaccggccgg ccatatcggc
      541 ggcgatcttg tcggcttctt tcccatcggc gaagaccgcg tcggaatcta tgccctggac
      601 gtgtcgggtc acggggtcac ggcggcgctg ttgacagcgc agctttcggt gcatctgtcg
      661 ggctcgtcag accagaatgt ggcgctgcgg gcggcgcagt cgggcagcga ttcggtaagg
      721 cccgcggcgc tggcgcattt cttcaacaac atgatgctgg aggagatgtg caccgacacc
      781 tatttcacca tgatctatgc cgatctgaac cacgtcaccg gtcagcttcg gattgttcag
      841 gcgggccatc cgcatccggt cctgcaaaag ggcgacggat cggtccggct gctgggccgg
      901 ggcgggatgc cggtcggcgt cttcgaggaa ccggtcttcg acgaggtgga cgtgatgctg
      961 gatcccggcg atcggctgct gatcacctcg gacgggatta ccgaggcgtc gaacccggcc
     1021 ggacgcctgc tgggcgatga cgggctggag gcgatcatgc gcaccaacgc ctttctgggc
     1081 ggccattcct tcctcgaggc catggcctgg tcggtctcgc aatatgcggg cggcgaaagg
     1141 cccgacgaca tgtcggcggt gctgatcgaa tatctgggac cggcaaagcc gttgaacctg
     1201 cccgcgcgct gatccggccc tagccgtgcg ctttcagcca gcgcgacagg attgcgcgcg
     1261 cgccgggatc ggccagcagg tcggccgcaa cggcggggcg gacccaatgc gcgctgtggc
     1321 cgggttcgga tggcggaccc aggcgccgga tcggacgggc cagccagatt tcgcatagtt
     1381 tctcggcatg aagatcatgg tcgggcatat aggcgaaacg gcgataggca gacaggaaac
     1441 gcggacccgc gatggtccag ccggtctctt cgccgacttc gcggtgcagc gccctgaccg
     1501 ggctttcgcc cggatcgata ccgccacccg gcaactggaa ttccggcacc ggcgcctgct
     1561 gatgggtcag caacagccac ccgtcccgga tcaggatcgc ataggccccg ggccgcctgc
     1621 gccagccgtg gccgatgcgc gatgcgggac ggggcggcgg gccgtagcgc gggatcatca
     1681 aatgcctcat ctgctgcggc ttctctctag cgcggcgggg cgcgcggcga aagccgatgc
     1741 gccctggctc ttgggatcgg cggcgaatgg attatattgg gcggcgaaac cgcctgcgcc
     1801 gcgccgcggg ccagactgaa ttttcaggga cccgccatga gcatgatcaa ccagatcgcc
     1861 tgggacgata cagtcctgcc cttccagctt gaccgctcct cgatccgggg ccgggtggca
     1921 cggctggacg gcgtgctgga tcacatcctg tcgcgccacg actatcccgc cccggtcagt
     1981 gccctggtgg cggaactggc cctgctgacc gcgctgatcg gccccaccat caagttgcgc
     2041 tggaagctga gcctgcaggt ccggggcaat ggcgccgtgc gcaccatcgc cgccgatttt
     2101 tatgcgcccg cctcgcagga cgaacccgcg cgcatccgcg cctgggccag tttcgatgcc
     2161 gacaggctgg acgcgagcga gccgtttgcc cagatcggcg agggttattt cgccatcctc
     2221 atcgaccagg gccagggcac gcatccctat cagggcatca cgccgctggc cgggggatcg
     2281 ctgtcagcct gcgcgcagac ctattttgcc cagtccgaac aattgccgtc gcggttcgcg
     2341 ctggccagcg gccattcgca actgaccggc gagccggcgc attggcgcgc cggcggcgtg
     2401 atgttgcaga ccctgcccgc acagccgatg gatgccggaa agggcggcag tggcgaaggc
     2461 gggctgatcg aggccgccga catcctgcag ggcggcgaat ccgaggattg gaac
//
LOCUS       DTVW01000700            2980 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1865054, whole
            genome shotgun sequence.
ACCESSION   DTVW01000700 DTVW01000000
VERSION     DTVW01000700.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2980)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2980)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2980
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1865054"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..562)
                     /locus_tag="EYO87_09280"
     CDS             complement(<1..562)
                     /locus_tag="EYO87_09280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007791710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HIC66170.1"
                     /translation="MIWTTAIALLGLMALSIPVGIVLFLLGIGVGQFYSAFPLLRGMG
                     QVIWSSSNSSTLIAIPLFVLLGEILVRGGVAERTYAALDKWLSWLPGGLVHANIATAT
                     MFSATSGSSVATAATVATVAMPQAERLNYDPRLFSGAIAAGGTLGILIPPSINLIVYG
                     FLTETSIPRLFSAGLVPGLLMALAFIA"
     gene            complement(559..1104)
                     /locus_tag="EYO87_09285"
     CDS             complement(559..1104)
                     /locus_tag="EYO87_09285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007791713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease"
                     /protein_id="HIC66171.1"
                     /translation="MIDATLGALRRANRAIALILGAGLILTVLFILTDVILRKLGSAS
                     LGGSDEISGYVMAAVASWGLACALLERAHVRIDVIRLKLARPAQMAMDLFAMLVTNGV
                     VLLIAWQSWPVLGKTLERGSRANTPLETPLWIPQGIWFAGWLWFAISATALSLIGIAF
                     LQAARRDDFDTVLGIGSEVPE"
     gene            complement(1118..2149)
                     /locus_tag="EYO87_09290"
     CDS             complement(1118..2149)
                     /locus_tag="EYO87_09290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012179813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C4-dicarboxylate ABC transporter
                     substrate-binding protein"
                     /protein_id="HIC66172.1"
                     /translation="MKLAKALLTGTALLASPAMAEELAVVGSWSNLPLYQDFESPFWT
                     EKLPQMTDGEFTAQLTSFDQMGIAGADVYRMLGDGVFDVGSTVADYTVGDAPELEGLD
                     VPLIANTPAEARSMVKAARPMVEEIMRNRFNAEVLGIAPYPPQVVFCKGEVGSLADLE
                     GKKIRGSGRMTTKLLEALGAEGVNIAFSEVPGSLERAVIDCAVTGAGSGYSAGWWEVT
                     DTLMVLPLGGWDPVVIAMNGDRYDGLSGDQQSMLKSAVAEGLEAPAWDAAQGGLEGDI
                     ACLTGQGECAAGDAASMTLVQPSEADLAAARKVLEDEVLPDWASRAGAEWVARWNDSV
                     GKAVGVTVQ"
     gene            complement(2146..2961)
                     /locus_tag="EYO87_09295"
     CDS             complement(2146..2961)
                     /locus_tag="EYO87_09295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_880567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative hydro-lyase"
                     /protein_id="HIC66173.1"
                     /translation="MLRARIRDGLFDGPTAGLCGDALQANLVILPGEEASDFLRFCQA
                     NPRPCPLLAVGEPGDPSLPALGDGIDLRHDLPRYRVWRRGALADEPADIADLWRNDMV
                     SFALGCSFSFEDALLRAGIAVRHQETGRNVPMYRTSLPTRPAGRFWGPLVVSMRPMRA
                     AEAIEAVQICAGFPLAHGAPVHLGDPALIGIADVMAPDYGDPPEFRHGEIPVFWACGV
                     TPQAAIAAARPDLAITHAPGHMLVTDIPAGRATARLTGVHADLPIKTQQERLT"
BASE COUNT          538 a         1057 c          967 g          418 t
ORIGIN      
        1 ccgcgatgaa ggccagggcc atcagcaggc cggggaccag cccggccgaa aacaggcgcg
       61 ggatcgaggt ttcggtcagg aagccataga cgatcaggtt gatcgagggc gggatcagga
      121 ttcccagcgt gccgccggcc gcgatggcgc cggaaaacag ccgcggatca tagttcagcc
      181 gctcggcctg cggcatggcc acggtggcca cggtcgcggc ggtggccacc gacgatccgg
      241 acgtggccga aaacatggtc gccgtcgcga tattggcatg gaccagaccg cccggcagcc
      301 atgacagcca cttgtccagc gccgcatagg tgcgttcggc cacgccgccg cgcaccagga
      361 tttcgcccag caggacgaac agcggaatgg cgatcagggt cgaggaattg gacgacgacc
      421 agatcacctg ccccatcccg cgcagcagcg gaaaggccga atagaactgg cccacgccaa
      481 tacccagcag gaacagcacg atgcccaccg ggatcgacag ggccatcagg cccagcagcg
      541 cgatggcagt ggtccagatc attccggcac ctcggatcca atgcccagca cggtgtcgaa
      601 atcgtcccgc cgcgcggcct gcaaaaatgc gattccgatc agcgacagcg cggtggcgct
      661 gatcgcgaac cacagccagc cggcgaacca gatgccttgc ggaatccaca agggcgtctc
      721 cagcggcgtg ttcgcgcgcg agccgcgttc cagcgtcttg cccagcaccg gccagctttg
      781 ccaggcgatc agcagcacga cgccattggt cacgagcatc gcgaacaggt ccatcgccat
      841 ctgcgcgggc cgggccagct tcagccggat cacgtcgatg cggacatggg cccgttcaag
      901 cagggcgcag gccagccccc agcttgcgac cgccgccatg acataacccg agatctcgtc
      961 cgacccgccc aggctggcgc tgcccagctt gcgcaggatc acatccgtca ggatgaacag
     1021 cacggtcagg atcaggcccg cgcccaggat cagggctatg gcccggttcg cgcgccgcag
     1081 cgcgccaagg gttgcgtcga tcatggcggc gcgggcgcta ctggacggtc acgccaacgg
     1141 ccttgccgac cgaatcgttc cagcgcgcga cccattccgc gccggcgcgg ctggcccagt
     1201 cgggcagaac ctcgtcttcc agcactttcc gcgccgccgc gagatcggcc tcggacggct
     1261 gcaccagcgt catcgaggcc gcatcgccgg ccgcacattc gccctggccc gtcaggcagg
     1321 cgatgtcgcc ttccagcccg ccttgcgcgg cgtcccaggc gggcgcttcc agcccctcgg
     1381 ccacggccga tttcagcatc gactgctgat ccccggaaag cccgtcgtaa cggtcgccat
     1441 tcatcgcgat caccaccgga tcccagccgc ccagcggcag caccatcagc gtgtccgtca
     1501 cctcccacca gccggcggaa tagccagacc cggcgccggt cacggcacag tcgatcacgg
     1561 cccgctccag cgagccgggc acttcggaaa aggcgatgtt gacgccttcc gcgcccagag
     1621 cctccagcag cttggtcgtc atccggcccg agccgcggat cttcttgccc tccagatcgg
     1681 ccagcgaacc gacctcgccc ttgcagaaca cgacctgcgg cggatagggc gcgatgccca
     1741 gaacctcggc attgaagcga ttgcgcatga tctcctcgac catcgggcgg gcggccttga
     1801 ccatgcttcg ggcctcggcg ggcgtgttgg cgatcagcgg cacgtccaga ccttccagtt
     1861 cgggcgcatc tccgaccgtg taatcggcca cggtcgagcc gacatcgaag accccgtcgc
     1921 ccagcatccg gtagacatcg gcgccggcga tgcccatctg gtcgaaactg gtcagttgcg
     1981 cggtgaattc gccatccgtc atctgcggca gcttctcggt ccagaagggc gactcgaaat
     2041 cctgatacag cggcaggttc gaccagcttc cgacgacggc cagttcctcg gccatggccg
     2101 gcgaggccag cagcgcggtt ccggtcagca gggcttttgc aagtttcatg tcagtctctc
     2161 ctgttgggtt tttatgggca gatcggcatg gaccccggtc agccgcgccg tggcgcgacc
     2221 ggcgggaatg tcggtgacca gcatgtggcc gggcgcatgg gtgatcgcca gatcgggccg
     2281 ggcggcggcg attgcggcct gtggcgtcac cccgcaggcc cagaagaccg gaatctcgcc
     2341 gtggcggaac tcgggcgggt cgccgtaatc gggtgccatc acatccgcga taccgatcag
     2401 cgccggatcg cccagatgga ccggcgcgcc atgggccagc ggaaagcccg cgcagatctg
     2461 cacggcctcg atcgcctcgg ccgcccgcat cggccgcatc gatacgacca gcggccccca
     2521 aaagcgcccg gcgggcctgg tcggcaggct ggtgcgatac atcggcacgt tccggccggt
     2581 ttcctgatgc cgcaccgcga tcccggcgcg cagcagcgca tcctcgaagc tgaaggaaca
     2641 gcccagcgcg aaggacacca tgtcattccg ccacagatcg gcgatgtcgg ccggctcgtc
     2701 ggccagcgcg ccccggcgcc agacgcgata gcgcggcaga tcatggcgca ggtcgatgcc
     2761 gtcgcccagc gccggcagcg atggatcgcc aggctcgccc acggccagca gcgggcatgg
     2821 gcgcggattg gcctggcaga agcgcaggaa atcggacgcc tcctcgcccg gcaggatcac
     2881 aagattggcc tgcaacgcat caccgcaaag gcccgccgta gggccatcga acagcccgtc
     2941 gcggatccgg gcgcgcagaa tgcgcggatc ggcaagacgg
//
LOCUS       DTVW01000701            2751 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1865769, whole
            genome shotgun sequence.
ACCESSION   DTVW01000701 DTVW01000000
VERSION     DTVW01000701.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2751)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2751)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2751
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1865769"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..2100)
                     /locus_tag="EYO87_09300"
     CDS             complement(<1..2100)
                     /locus_tag="EYO87_09300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009807938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease"
                     /protein_id="HIC66174.1"
                     /translation="MRLNDAVHDVTGEIFRDGWSRIRGSMQGLQASRQRQLVRAAAGH
                     RAAVFKAIRGGGTHTKSQLMNQLDYLTTKSSHIVDSSGFLDGKTRLEGSEIKDLTDRF
                     VKRWSAGFKPKLGQTTHMLMSYPIGTRGEDVRDITANVAERFFQSEEGHFDYIIAVHE
                     DRDHPHAHIVLNRRSQEGEFFFLGRDHRFNYDDFRLAMVEEAEKFGVRLEATRRLDRG
                     VVHYPPRPREVYAAKVEGRAAEPRPRVGADLDRALEEIANTRIIYHSLAAEASADNRE
                     DIADALFRSGELLTKGGKLNLEGGIYMAEEQSFEDLRTRYADQVARVQGMIDAKPETE
                     RPRLERSLNEIQSRLAHMQPLGLRSVTLTEKPSEGGVYSETNIDAARLDRLRDPEVRA
                     QVDTALRGTGISSSVVVARMETGAQNAALERQWIADDLARVAERDGLNLERRADLETA
                     RETLNRAHVQLGVALERAGVLREDGVVEDRTVTEKVHYHRDATEDMERTIRQDMRSEG
                     LTEDQIEAREWEIVSRAERRIEEEQRSYLDAHPELLARPGDVIDRSEPYRERITDEAR
                     AREITREVDRIMEGRDARTPVADAVTDEFRARYPDMPSHLARGLGATYASVTDLRDTE
                     ALNQVRRDNELREVALDLRDGRLSDAREGDAVEGAPIADPDIRRVVDHERAGNLQSPF
                     QDDGQRLTYRDAVERELD"
     gene            complement(2087..2680)
                     /locus_tag="EYO87_09305"
     CDS             complement(2087..2680)
                     /locus_tag="EYO87_09305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009807939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HIC66175.1"
                     /translation="MSRTRRLTQTERAEIIREAGEGVGTSVLAERFGVTPRAIQYTLK
                     ADEERQRDAAVATAAVTVKLTPEELSALDEVLAAAGIETRTEGVRRLIQAAGGTFVPD
                     AQLAAEMARYRASLHEVGNGVVQIAKQMMKASRAGQGEGSAANAELSELRLAQMRGLA
                     RFILDSADEIDLLLRRRRDAMQLSATAALREFAHAAE"
BASE COUNT          432 a          985 c          830 g          504 t
ORIGIN      
        1 gtcgagctcg cgctcgacgg cgtcgcggta ggtcagtcgc tgaccgtcgt cctggaacgg
       61 cgactgcaga ttgccggccc gttcatggtc gacgacccgc cggatgtccg gatcggcgat
      121 cggtgccccc tcgacagcgt ccccctcgcg cgcgtccgaa agccgcccgt cgcgcaggtc
      181 gagcgccacc tcccgcaact cgttgtcgcg gcggacctgg ttgagggcct cggtgtcgcg
      241 cagatcggtg acggaagcat aggtcgcgcc aagcccgcgg gcgagatgcg acggcatatc
      301 gggatagcgc gcgcggaact cgtccgtgac ggcatccgca acgggggtcc gcgcgtcgcg
      361 accttccatg atgcggtcaa cctcgcgggt gatctcgcgg gcccgggcct cgtcggtgat
      421 gcgctcccgg tagggctcgg accggtcgat cacgtcgccc gggcgcgcga gcagttcggg
      481 atgcgcatcg aggtagctgc gttgctcttc ttcgatacgc cgctccgcgc gggagacgat
      541 ctcccactcc cgcgcctcga tctggtcttc ggtcagacct tccgaacgca tgtcctggcg
      601 gatcgtgcgc tccatgtcct cagtggcgtc ccgatgataa tggactttct ccgtcacagt
      661 gcgatcttcc acgacaccgt cttcgcgcag gacccctgcc cgctccagcg cgacaccgag
      721 ctggacatgg gcccgattga gggtctcgcg cgccgtctcc agatccgcgc ggcgctcgag
      781 gttgagaccg tccctctccg ccacccgcgc cagatcgtca gcgatccatt gccgctcgag
      841 cgccgcgttc tgcgcgcccg tctccatccg cgcgacgacg acggacgaac tgatcccggt
      901 cccgcgcagc gcggtgtcga cctgcgcccg cacctcgggg tcgcgcaacc ggtcgagccg
      961 cgccgcatcg atgttggtct cggaatagac cccgccctcc gagggcttct cggtcagtgt
     1021 cacggagcgc agccccaagg gctgcatatg cgcgagccgc gactggatct cgttgaggct
     1081 gcgctcgagc ctcggccgtt cggtctccgg cttcgcatca atcatgccct ggacgcgcgc
     1141 gacctgatcg gcataacggg tccgcagatc ctcgaacgat tgctcctctg ccatgtagat
     1201 gcctccttcc aaattcagct tgccgccctt ggtcagaagc tctccggacc ggaacagcgc
     1261 atcggcgatg tcctcgcggt tgtccgcaga ggcctcggcg gcaagcgagt gatagatgat
     1321 ccgtgtattg gcgatctctt cgagggcgcg atcaagatcg gccccgaccc gtggccgcgg
     1381 ttccgcggcc cgcccctcaa ccttggccgc atagacctcg cgggggcgcg gcgggtagtg
     1441 cacgacacct cggtcgagcc gccgcgtggc ctccagacgc acgccgaatt tctcggcttc
     1501 ctcgaccatg gcgaggcgga aatcgtcgta gttgaaccgg tgatcccggc ccaggaagaa
     1561 gaactctccc tcctgcgatc ggcgattcaa aactatatgc gcgtgggggt ggtcccggtc
     1621 ctcatggaca gcgatgatat agtcgaaatg cccctcttcg gactgaaaga accgctccgc
     1681 cacattggcg gtgatgtcgc gcacatcctc gccccgggtc ccgatcggat aggacatgag
     1741 catatgcgtc gtctgtccga gcttgggctt gaatcccgcg ctccagcgct tgacgaagcg
     1801 gtcggtgagg tccttgatct ccgaaccctc aagcctcgtc ttcccgtcca ggaacccgct
     1861 gctgtccacg atatgcgagg acttggtggt gaggtaatcg agctggttca tgagctggga
     1921 tttggtatgc gtgcccccgc cccggatcgc cttgaagacc gccgcacgat gccccgccgc
     1981 cgcccgcacg agctgcctct gccgggacgc ctgcagcccc tgcatcgagc cccggatgcg
     2041 gctccaacca tcccgaaaga tctctccggt gacgtcatgg acggcatcat tcagccgcat
     2101 gggcaaactc cctcagcgcg gcggtcgcgg atagctgcat cgcatcccga cgacggcgca
     2161 gcagcagatc gatctcgtca gcggaatcaa gaatgaaccg cgccagtcca cgcatctgcg
     2221 cgaggcgcaa ttcggacaac tccgcgttcg ctgcggagcc ttccccctgc cccgcccggc
     2281 tggccttcat catctgcttg gcgatctgaa cgacgccgtt gccgacctcg tgcagggagg
     2341 cccggtaacg cgccatctca gccgccagct gcgcatccgg aacgaaggtt ccccccgccg
     2401 cctggatcaa ccgccggacc ccctccgtgc gggtctcgat ccccgccgcg gccagcacct
     2461 catcgagcgc actaagctct tcgggggtca gcttcaccgt cacggcggcg gtcgccacgg
     2521 ccgcatcccg ctggcgttct tcgtccgcct tcaacgtgta ttggatggcc cgcggcgtga
     2581 ccccgaaccg ctccgcgagc acggaagtcc ccacaccttc tccggcctca cggataatct
     2641 ccgctcgctc cgtctgtgtc agtctcctgg tccggctcat acgaagaaag ccaccctatt
     2701 tcctgccacc ttcattcaag gtcgctttca tcatacgaaa ctatatgtca c
//
LOCUS       DTVW01000702            3341 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1865770, whole
            genome shotgun sequence.
ACCESSION   DTVW01000702 DTVW01000000
VERSION     DTVW01000702.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3341)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3341)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3341
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1865770"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..991)
                     /locus_tag="EYO87_09310"
     CDS             complement(<1..991)
                     /locus_tag="EYO87_09310"
                     /inference="COORDINATES: protein motif:HMM:PF16363.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HIC66176.1"
                     /translation="MSQYLSQLAGKRIVVTGGVGSVGRAIVEKLAASPVGHVRVIDNN
                     ESGLFDMEMDFAGRKGKAGLDFFHADITDEREMRRTFDGMDLCFHCAALKHVPSCERS
                     PFSAVKVNIEGVEVVGRVAQMQGLEKVIFTSSDKAVNPTNVMGTSKLMGERLFTSMNF
                     LTHSDSPTLFSSTRFGNVLGSRGSVVPLFAQQIAAGGPVRVTDRRMTRFVMTMQQSAD
                     LVIGSMVLARGGEVFITKMPVLRIVDLARVMIQHLAPAYGHDPRSIGIEITGSRPGEK
                     LWEELSTDEEANRLLESDDFLIVMPAGHTAEQRRQKYAFDEIGARPSGIVYHSD"
     gene            complement(1309..2430)
                     /locus_tag="EYO87_09315"
     CDS             complement(1309..2430)
                     /locus_tag="EYO87_09315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011747639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OpgC domain-containing protein"
                     /protein_id="HIC66177.1"
                     /translation="MNRLIVLDMLRGYALICIMIDHMPISILRRFTLANFSVFDAAEL
                     FVLLSGFLVGLVWHSVEERDGLRSAQWRFARRSFEVWRALVLGGVIMALVSAGLLALD
                     MSHTAVWNQYAEWVVENPLGYSGVLATMWLQPNLLDVLALYVILIVSAPLLVPLLRRW
                     PISFAIGSLVLWWFAPLLNQIIPNHSRAGLLFNPFGWQMLFYSGIAMALFRDRIMRTL
                     MPHRRLLTILAAGMFLFGTAIVIGAKIGEPAKEFRDALKLIYGEINKWDLDGTRYLAI
                     LAATWLVAVPLARPMAWLAATVPGVAMQQIGRGGLWAFVASVLLSVIGDAFQLNPEGQ
                     GVLRRLTVDLWSITALWWVSVAWLRFGAPRLKRKTPRRT"
BASE COUNT          676 a         1074 c         1045 g          546 t
ORIGIN      
        1 ggtccgagtg atagacgatg ccgcttggcc gtgccccgat ttcgtcaaag gcatatttct
       61 gccgccgctg ttcagccgta tgaccggccg gcatgacgat caggaaatcg tcgctttcca
      121 gaagccggtt cgcctcttcg tccgttgaaa gctcttccca cagtttttca ccggggcgcg
      181 aaccggtgat ctcgataccg atcgatcggg gatcatgccc gtaggccggt gccaggtgct
      241 gtatcatgac ccgtgccaga tcgacgatcc gcaggacagg catcttggtg atgaatactt
      301 cgccgccccg ggccaggacc atgctgccga tcaccagatc ggccgattgt tgcatggtca
      361 tgacgaaacg cgtcatgcgc ctgtcggtga cgcgcacggg cccgcccgcg gcaatctgct
      421 gcgcgaacag cggcaccacc gaaccgcgcg atcccagcac gttgccgaaa cgggtcgagg
      481 aaaacagcgt cggcgaatcc gaatgggtga gaaagttcat cgacgtgaac agccgctctc
      541 ccatcagctt cgatgtgccc atgacattgg tcgggttcac cgccttgtcg gaagaggtga
      601 agatgacctt ttcaagtccc tgcatctgcg cgacgcggcc gacgacctcg acaccctcga
      661 tgttgacctt cacggccgaa aacgggctgc gttcgcaaga cggcacgtgt ttcagcgcgg
      721 cacagtgaaa acacagatcc atgccgtcga aggtgcgcct catctcgcgt tcgtcggtga
      781 tgtcggcgtg gaagaagtcg agccccgcct tgcccttgcg gccggcaaag tccatttcca
      841 tgtcgaacag gccgctttcg ttgttgtcga tcacgcgaac atgtccgacc gggcttgcgg
      901 caagtttctc cacgatcgcc cggccgaccg atccgactcc tccggtgacg acgatgcgct
      961 ttccggcgag ttgcgacaga tattgcgaca tttcaggtcg tcctcctctt cgggcgagaa
     1021 gacgcccacc tcgttcaccc gatggcctcg gaagccgcgt cctccgacct cttccgggac
     1081 gggaattcga aagtcaatct cccgaggtgc aaccattgag cgaatttcag cgcaaaagtt
     1141 atcgagaagg ggggatggat ttacgccccg tgttgcagcg ggccgatgtc agtgatcgtt
     1201 tgcagccggc aagcaggaaa ggctgcctga tgaagtggct ggcagccggg cagtccggac
     1261 gcatggctgt tcccgcaccc gagggtcatt tctgcctgtc ccgacaggtc aggttcggcg
     1321 cggcgtcttt cttttcagcc gcggcgcccc aaagcgcagc caggccacgg atacccacca
     1381 aagcgccgtg atcgaccaga gatcgaccgt caggcgtcgc aggacgccct gaccttccgg
     1441 gttcaactgg aaggcgtcgc cgatcaccga cagcagaaca ctggcgacga atgcccaaag
     1501 cccgccgcga ccgatctgct gcatggcgac acccggcacg gtcgcggcca gccatgccat
     1561 gggccgggcc aggggcaccg cgaccagcca ggtcgcggcg agaatcgcca gatagcgtgt
     1621 gccgtccagg tcccatttgt tgatttcgcc atagatcagc ttcagcgcgt cgcggaattc
     1681 tttcgcgggc tcgccgatct tggccccgat cacgatcgcg gtaccgaaca ggaacatgcc
     1741 cgctgcaagg atcgtcagaa gccgccgatg cggcatcagc gtccgcatga tccgatcgcg
     1801 gaacagcgcc atcgcgatgc ccgaataaaa cagcatctgc cagccgaacg ggttgaaaag
     1861 caggcccgcg cggctgtggt tcgggatgat ctggttgagc agcggcgcaa accaccacag
     1921 gaccagcgat ccgatcgcga agctgatggg ccagcgccgc agcagcggca ccagcagcgg
     1981 cgccgaaacg atcaggatga cgtacagcgc cagcacgtcc agaaggtttg gctgcaacca
     2041 catcgtcgcc agcacgccgg aatagcccag cgggttctcg accacccatt cggcatactg
     2101 gttccagacc gcggtatggg acatgtccag cgccagcagc ccggccgaaa ccagcgccat
     2161 gatcaccccg cccagaacca gcgcccgcca gacctcgaac gagcgccgtg caaagcgcca
     2221 ttgggcgctg cgcaatccgt cccgctcctc gaccgaatgc cagaccaggc cgaccagaaa
     2281 gcccgacagc aggacgaaca gttctgctgc gtcgaagacc gagaaattgg caagcgtgaa
     2341 ccgccgcagg atcgagattg gcatatggtc gatcatgatg cagatcagcg cgtaaccgcg
     2401 cagcatgtcg agaacgatca ggcggttcat tcaggcagcg cgctccatcg ccgcaacagc
     2461 gcggcatcgg atatcaacgc ttcggtttct tccgggttca gaagatcaag cgcctgttcg
     2521 cggcccgcgg cattggcgat ctttgccccg gcggtgatct gcggcagccg ctcggccaca
     2581 gggcggtcgg gcagcgaagt cagcatggcc aggtgatgcg ccatacggtc gggatgctgt
     2641 gccagttgca tgatcgccgc acggccgggc agggggcgcg gcagggcgcg gatcgccgcg
     2701 ctggcctcgg tcaggatcgg gggataatcg cgttcctcgg gtgtgaccag caggccgttc
     2761 atccgtgccc agcggccgaa gaccgggctt gccgacagcc gggatgtcag cggcgacagg
     2821 atcaggccgg caagaatcgg cgacagccag atcagttgcg tcggcgagaa ctgcgccagc
     2881 accagcagcg tggcgacgcc cagcagcacg tgaatccagt gccgcgcgat cacaacctcc
     2941 cagccgggca tcgagccggc ccgttcttgt gcgttccagc cgctgtcgcg gccgcgcagg
     3001 atttcgaaga tctggcgggt ctggatcagc atctggaccg gcgcgatcag ggccgatagc
     3061 aggatctcga acagcgcgct ggcaaagatg cggaccggtc cgccggaatt gcgcgccagc
     3121 ggccgcgacc aggcgcgcaa ggtcgcgatc agtctgggca gcagcagcag cgccatcgcc
     3181 gcgatgaaca gatacagcat ccggcgggca tcgaagaccg gccagtccgg aaaaagctga
     3241 taggcgttcg ggaaatattc gggcgtggac agcagcaccg tggccgacag gaccagaccg
     3301 accagcagca gcgccagcca gatcgggctc atcagaaaac c
//
LOCUS       DTVW01000703            1538 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1866947, whole
            genome shotgun sequence.
ACCESSION   DTVW01000703 DTVW01000000
VERSION     DTVW01000703.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1538)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1538)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1538
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1866947"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(19..687)
                     /locus_tag="EYO87_09320"
     CDS             complement(19..687)
                     /locus_tag="EYO87_09320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002719607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HIC66178.1"
                     /translation="MTQDQTTEETGRIALVTGASRGLGAALAEGLARRGFHVLAVART
                     VGGLEELDDRIRASGGSATLAPMDVTDAAAMQQMVQAVAERWGGLDLWAHCAIHAAPL
                     SPAPHIDGKDWSKSLLANVEVVRGLIALIEPLLRIRQSTALFFDDPRAGQKFFGAYGA
                     TKAAQIALVRSWQAENAAIGPRVVIAEPAAMPTATRGRFFPGEDRAVLTSCRHEAERI
                     LDAL"
     gene            811..1368
                     /locus_tag="EYO87_09325"
     CDS             811..1368
                     /locus_tag="EYO87_09325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007609743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin transporter BioY"
                     /protein_id="HIC66179.1"
                     /translation="MTLTQAALPARSTRTNILLVLAGSALVALSAQASVPMWPVPMTL
                     QTLAITLIGLTYGSRLAAATMLAYLAEGAVGLPVFANASGGIAPLMGPTAGFLWGFVG
                     MAWLTGWLVERGLDRGFLRLFVAGLVPGLMLFVPGALALSLVLGKSLSEAAALAVMPF
                     LAGALVKAAIAAMAVAGGWQLFRKR"
BASE COUNT          213 a          543 c          514 g          268 t
ORIGIN      
        1 cggtcgcggg acgcagggct acagcgcgtc caggatccgc tcggcctcgt ggcgacagga
       61 cgtcagcacc gcgcgatcct ctccgggaaa gaaccgtccg cgggtggcgg tcggcatcgc
      121 ggccggttcc gcgatgacca cgcgcgggcc gatcgctgcg ttctcggcct gccagcttcg
      181 caccagcgcg atctgcgcgg ccttcgtcgc gccgtaggcg ccgaagaatt tctgtccggc
      241 gcgaggatcg tcgaagaaca gggcggtgct ctggcgtatg cgcagcagcg gctcgatcag
      301 ggcgatcagg ccgcgcacga cctcgacatt ggccagcagc gatttcgacc aatccttgcc
      361 gtcgatatgc ggcgccggcg acagcggtgc ggcgtggatc gcacaatgtg cccacagatc
      421 cagaccgccc catcgttcgg ccacggcctg caccatctgc tgcatcgccg ccgcgtcggt
      481 cacatccatc ggcgccagcg tcgcgctgcc gcccgaggcc cggatgcggt cgtccagctc
      541 ttccaggccg cccacggtcc gggccacggc cagcacatga aatccgcgcc gggccagccc
      601 ctcggccagg gccgcgccaa gaccgcgcga cgcgcctgtc accagcgcga tcctgcctgt
      661 ttcctcggtg gtctgatcct gtgtcatggc ggcagccttt cgcaaaagag cggtgcccgc
      721 gcaagaccct ttcgccgacc ggccgattga ctttcgcgcc cgctgcgtga acattcggcc
      781 acgaatttcg caccaggaag aggccccgcc atgacattga cccaagccgc gctgccggcc
      841 cgctcgaccc gaacgaacat cctgctggtt ctggccggct cggctctggt cgcgttgtcc
      901 gcccaggcca gcgtaccgat gtggccggtg ccgatgacct tgcagactct ggccatcacg
      961 ctgatcgggc tgacctatgg ctcgcgtctg gcggcggcga cgatgctggc ctatctggcc
     1021 gaaggcgccg tgggcctgcc ggtctttgcc aatgcctcgg gcgggatcgc gccgctgatg
     1081 gggccgacgg cgggcttcct gtggggcttt gtcggcatgg cctggctgac cggctggctg
     1141 gtcgaacgcg ggctggaccg cggcttcctg cgcctgtttg tcgccggtct cgtgccggga
     1201 ctaatgctgt tcgtgccggg cgccctggcg ctgtcgctgg tgctgggcaa atccctgtcc
     1261 gaggccgccg cgctggcggt gatgccgttc ctggccggcg cgctggtcaa ggccgcaatc
     1321 gccgcgatgg ctgtcgccgg cggctggcag ttgttccgca agcgctgacc gaagcgatgt
     1381 ccgcgacgcg gcggccatcg cggcccgcct gaaagccgtc tctttgtcgg accaggactc
     1441 ggtgtgtaac ctcccgattc cctcctcccg gagtattttc ttcaactcga cgagcatgat
     1501 cggacgggct cccagatgac gagaaaggag aacctgcc
//
LOCUS       DTVW01000704            1307 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1867014, whole
            genome shotgun sequence.
ACCESSION   DTVW01000704 DTVW01000000
VERSION     DTVW01000704.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1307)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1307)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1307
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1867014"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..574)
                     /locus_tag="EYO87_09330"
     CDS             complement(<1..574)
                     /locus_tag="EYO87_09330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_041530600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 4-phosphate
                     cytidylyltransferase"
                     /protein_id="HIC66180.1"
                     /translation="MNVRAPAGYAAIITAAGRGSRAGGAIPKQWRELAGRTVLARAIA
                     AFAGFDRVILVVHPDDMARAIRAFSGSVAIVAGGETRTASVRAGLAALEGGATSHVLI
                     HDGARPLVPDAVIRGVIEALQSGAQAAAPALRVTDALWRGANGLVAATAPRDGLYRAQ
                     TPQGFALDQISAAHRIHAGEAADDVELALAN"
     gene            complement(571..>1307)
                     /locus_tag="EYO87_09335"
     CDS             complement(571..>1307)
                     /locus_tag="EYO87_09335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011337873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase II"
                     /protein_id="HIC66181.1"
                     /translation="PLATTDNLNFGNPEKPEIMGQLVGAIKGIGEACRALDFPIVSGN
                     VSLYNETDGTGILPTPTIGGVGLIDDLSNLIAGLPSEGDIAILIGTTRGHLGQSALAA
                     EAFGIEAGDAPPVDLAAERRHGEFIRANRAHLRAATDLSDGGLGLAAFEMAEAAGIGL
                     RLDTDDIAGLYAEDQARYLVACDAEGAAALLRAAEAAGVPAAQVGSFGGVAVQMGEDA
                     GDLADLSRLYRSAFASAIGGDRPDHA"
BASE COUNT          200 a          450 c          472 g          185 t
ORIGIN      
        1 cgttggccaa ggccagttcc acatcatcgg cggcctcgcc ggcatggatg cggtgcgccg
       61 cggatatctg gtccagggca aaaccctgag gggtctgcgc acgataaagc ccgtcgcggg
      121 gggctgtggc ggcgacaagc ccgttggcgc cgcgccacag cgcgtcggtg acgcgcaggg
      181 ccggggcagc ggcctgagcg cccgattgca gcgcctcgat cacgcccctg atgaccgcat
      241 cggggaccag cggacgggcg ccgtcatgga tcaggacatg gctggtggcg ccgccttcca
      301 gggccgccag gcccgcgcga acgctggccg tgcgggtctc gccgccggcg acgatggcga
      361 cggagccgga gaaagcccgg atggcgcggg ccatgtcgtc ggggtggacg acaaggatca
      421 cccggtcgaa gccggcaaag gccgcgatgg cgcgggccag gaccgttcgg cccgcaagct
      481 cgcgccattg cttgggaatt gcgccgccgg cgcggctgcc gcgacccgcc gccgtgatga
      541 tcgcggcgta gcctgcgggc gcgcggacat tcatgcgtga tcgggcctgt cgccgccaat
      601 cgccgaggca aaggcgctgc ggtaaagcct tgacaagtcg gccagatcgc ctgcgtcctc
      661 gcccatctgg acggccacgc cgccgaagct gccgacctga gcggcgggaa cgcccgctgc
      721 ttcggccgcc cgcagcagcg ccgccgcgcc ctccgcgtcg caggcgacaa ggtagcgggc
      781 ctgatcctcg gcatagagcc cggcgatgtc gtcggtgtcc aggcgcagcc cgatgcccgc
      841 cgcctcggcc atctcgaacg ccgccagacc caggccgcca tccgacaggt cggtggccgc
      901 gcgcaaatgg gcccggttgg cgcggatgaa ttcgccgtgc ctgcgttcgg cagccagatc
      961 gacggggggg gcatcgcccg cttcgatccc gaacgcctcg gccgccagcg ccgattggcc
     1021 aagatggccc cgggtggtgc cgatcaggat ggcaatgtcg ccttcggacg gcagacccgc
     1081 gatcaggttc gacagatcgt cgatcaggcc gacgccgccg atggtgggcg tgggcaggat
     1141 gcccgtgccg tcggtttcgt tgtaaagcga gacattgccc gacacgatag ggaaatccag
     1201 cgcccggcaa gcctcgccga tgcccttgat ggccccgacc agttgcccca tgatttccgg
     1261 cttttcggga ttgccgaaat tcaggttgtc ggtcgtggcc aggggca
//
LOCUS       DTVW01000705            1092 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1867034, whole
            genome shotgun sequence.
ACCESSION   DTVW01000705 DTVW01000000
VERSION     DTVW01000705.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1092)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1092)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1092
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1867034"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
BASE COUNT          260 a          343 c          322 g          167 t
ORIGIN      
        1 ggccggcgca acatcgcggt cttttgggac gtggcggtgc gcgacatgca gggcaggccc
       61 gaaatcggag agaaggccgc cgcgacctcg ccccggttcg gcgacgacaa ggtctggacg
      121 ccctatgtcc ttgacgtccg gccctccgag atcggaacga tcgcgccgtt caggaaaagc
      181 ggcgatgatc ccgcgcccac cgtcgccgcg actgtcgtgc tggaggccgg atcgacggtc
      241 acggtggaca gccagggcct tgcccccggc agctacgacc tgatcgtggc ggacagcatc
      301 accgacaatg gcgcaaccct gcccgccggg gtcagcatca tgggcgggaa tgtcctgcgg
      361 ctgaccgtgg cctaggccgc ctgcggcgcc gtcgcagaca ggcgatggcg cccattccca
      421 ccggcagcag agcggccgag gccggcagcg gcacgggggc aagcgacaag tcggtaatgc
      481 tggcggaggt tacggcaaat tcagccgttc tatcccagaa aacgtaaaag ccatcggcaa
      541 aatcgccact gctcatataa tccagattat aggtatagga aagccgacct cctgcaccta
      601 gattagacac gaaggacaca tattccccag cctggaaaga cagcgacgac gcagacgccc
      661 tgacggccga aacggtggcg ctgcaatcat tcccggcgag gacgcaggca tatgccctgc
      721 cgccattgtc gaaatagtcc agaacctggt cctgatcgtc cggcacatag aagattcccg
      781 aaaaggaaac ggcatcgccg atgccggccg aggaatagac gggcagcccg aacgggttgc
      841 catcggcaag ataggaatcc ttgcgaattt cctcgcccgt cccagaaaag atcaattgaa
      901 gttcggtata tctcgttcca agataaatca gatcgagatc atatctgaaa accgccgcac
      961 cggctgacga tccgcagacg gccagaacgg ccgcgccaag aatggccctc atactcataa
     1021 cacctccgaa tgacgcgaat cggcaaaatc ctctcgcatt cgtgaagaat agaaatccgc
     1081 cactgcccgg ca
//
LOCUS       DTVW01000706            2349 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1867518, whole
            genome shotgun sequence.
ACCESSION   DTVW01000706 DTVW01000000
VERSION     DTVW01000706.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2349)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2349)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2349
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1867518"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1117)
                     /locus_tag="EYO87_09340"
     CDS             complement(<1..1117)
                     /locus_tag="EYO87_09340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005616437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease"
                     /protein_id="HIC66182.1"
                     /translation="MTLLLTTAALILLILINVPIAIAIGIVSVGGFYLTSGSARFYDM
                     AIALYSGATSFPLIAIPLFILAGNLMNTSGISVRLINFVTALIGFVRGGLGMVNIGVS
                     MVFAEISGSAVADVAATGTVLIPEMKKRGYSRTLAAAITSSSASLAIIIPPSIPMILY
                     GAIAETSVLKLFVAGIVPGILGGGLLMLVTYILAIRYDLPRAEGFDPCHVWKSLKEAF
                     WALTMPVIILGGIFSGVVTATEGAGLAVLAALIIGIFIYRDLDLKRLRSTMLEGVSQT
                     GVVMLLVATSAALGLFLTQAQVPQQLAAQITQMTTNPLIVLALLNLLLLVLGMFLHGA
                     AAIILVVPVVMPLVNAVGIDPVHFGIMVTLNLAIGQQT"
     gene            complement(1114..1677)
                     /locus_tag="EYO87_09345"
     CDS             complement(1114..1677)
                     /locus_tag="EYO87_09345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007117780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease subunit"
                     /protein_id="HIC66183.1"
                     /translation="MIVQTEKILLRLIESICLVLLVVLAVAVVYSTTMRYLGSSPSWY
                     DEVASVLLAWLTYFGATYAVFTRSHMGFAGLVAALPRGPAVALAILSEMLVVAFFALV
                     AWYGYAVLRVAAFDSLLSLPWLTLDIVQSVIPISAVLMILGTLMTMPRAIRDAARGID
                     REHAEIEHAIAEAEKEAEALSRKEDRP"
     gene            complement(1736..>2349)
                     /locus_tag="EYO87_09350"
     CDS             complement(1736..>2349)
                     /locus_tag="EYO87_09350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009177354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HIC66184.1"
                     /translation="QPDLAPKLDEKGLHLISTWENGFRQITNNTRPINTPEDLAGLKI
                     RTPSSEWRVAMFKEWGANPTPMAFSEVFVALQTGTMDGQENPLTNIVGANFQEVQKYL
                     SLTDHVYSPTYLTSGAETWAGLPDDVKTAVSEIAAEVQDWSLAEGEKADGTLVEKVKA
                     AGVEVNDADKAAFVAASQPIYDAFAQQVPGGADLVSKAQALAK"
BASE COUNT          480 a          747 c          740 g          382 t
ORIGIN      
        1 gcgtctgctg gccgatggca aggttcagcg tcaccatgat gccgaaatgg accggatcga
       61 tccccacggc gttgaccagc ggcatgacca cgggcacgac gaggatgatc gcggccgcgc
      121 catgcaaaaa catccccagc accagcagca gcaggttcag cagcgccaga acgatcagcg
      181 gatttgtcgt catctgcgtg atctgcgccg ccagttgctg tggcacctgc gcctgggtca
      241 gaaacagccc caatgccgcc gaggtggcga ccagcagcat gaccacgccg gtctggctga
      301 ccccttccag catcgtgctg cgcaaccttt tcaggtccag atcgcgatag atgaagatgc
      361 cgatgatcag cgcggcaaga acggccagtc cggccccctc ggtcgccgtc accacgcccg
      421 agaagatgcc gcccagaatg atgaccggca tggtcagcgc ccagaaggcc tctttcaagc
      481 ttttccagac gtgacacgga tcaaagccct cggcgcgcgg caggtcgtag cggatcgcca
      541 ggatataggt gaccagcatc aaaagcccgc cgcccaggat gccgggaacg atacctgcga
      601 cgaacagctt cagcaccgag gtctcggcga tggcgccgta aaggatcatc gggatcgagg
      661 gcggaatgat gattgccagc gaggccgagg acgaggtgat cgccgccgcc agcgtgcggg
      721 aatagccgcg tttcttcatc tcggggatga gcacggtgcc ggtcgccgcc acatcggcga
      781 cagccgatcc cgaaatctcg gcgaagacca tcgagacgcc gatattgacc atgcccagcc
      841 cgccgcgcac gaagccgatc agcgcggtga cgaagttgat cagccggacc gagatgcccg
      901 atgtgttcat caggttgccc gccaggatga acagcgggat cgcgatcagc ggaaacgagg
      961 ttgcgccaga atacagcgcg atcgccatgt cgtagaaacg ggcgctgccc gaggtcaggt
     1021 agaagccgcc gacggacacg atgccgatgg cgatcgcgat gggcacgttg atcaggatca
     1081 gcaagatcag ggcggcggtg gtcagaagca gggtcacggc ctgtcctcct tgcgggacag
     1141 ggcctcggct tccttctcgg cctcggcgat ggcatgttcg atctcggcgt gttcgcggtc
     1201 gatgccgcgt gccgcatcgc ggatcgcgcg cggcatcgtc atcagggtgc caaggatcat
     1261 cagcacggcg gaaatcggga tgacggattg cacgatatcc agcgtcagcc atggcaggct
     1321 gagcagcgaa tcgaaggccg cgaccctcag caccgcatag ccgtaccatg cgacaagcgc
     1381 gaagaaggcg accaccagca tttccgacag gatggccagc gccacggcag gcccgcgcgg
     1441 caatgcagcg accagccctg caaagcccat atgcgaccgc gtgaacacgg cataggtggc
     1501 gccgaaatag gtcagccatg ccagcagcac gcttgcgacc tcgtcatacc acgagggtga
     1561 cgagcccaga tagcgcatgg tggtcgaata gacgacggcg acggccagca cgaccaacag
     1621 gacaaggcag atcgactcga tcagccggag caggatcttc tctgtctgga caatcatggg
     1681 gtgctcctgc gcgagacggt cggcacgaca gccgcgcgcc gaccgcgagg cggtcctact
     1741 tggccagcgc ctgtgccttc gagaccagat cggccccacc cggaacctgc tgagcgaaag
     1801 catcgtagat cggttgcgag gccgcgacga aagcggcctt gtcggcgtcg ttcacctcga
     1861 cccccgccgc cttgaccttc tcgaccagcg tgccatccgc cttctcgccc tcggcgagcg
     1921 accagtcctg gacctcggcc gcgatttcgg acacggccgt tttcacgtcg tcgggcaggc
     1981 ccgcccatgt ctcggccccg ctggtcagat aagtgggcga atagacgtgg tccgtgaggc
     2041 tgagatattt ctgcacctcc tgaaaattcg cgccgacaat gttggtcaaa gggttttcct
     2101 gaccgtccat cgttccggtc tgcagggcga cgaacacctc ggagaaggcc atcggcgtcg
     2161 ggttcgcgcc ccattccttg aacatcgcga cccgccattc cgacgacggc gtgcggatct
     2221 tcagtcccgc aagatcctcg ggggtgttga tcggccgcgt gttgttggtg atctggcgaa
     2281 aaccgttctc ccatgtcgaa atcaggtgca ggcctttctc gtcaagcttc ggcgccaaat
     2341 cgggttgga
//
LOCUS       DTVW01000707            1592 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1868278, whole
            genome shotgun sequence.
ACCESSION   DTVW01000707 DTVW01000000
VERSION     DTVW01000707.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1592)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1592)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1592
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1868278"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..598)
                     /locus_tag="EYO87_09355"
     CDS             complement(<1..598)
                     /locus_tag="EYO87_09355"
                     /inference="COORDINATES: protein motif:HMM:PF00180.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate/isopropylmalate dehydrogenase family
                     protein"
                     /protein_id="HIC66185.1"
                     /translation="MTRTTLALMPGDGIGPEIAAATRVVLEAASDRFDLDLAFRVIEV
                     GFAALEATGSTFPETAFKAIEGCDGIVLGPVSHNAYPTREDGGLNPSGELRKRLDLFA
                     NIRPDRSRAGIVPRAGTPLDLVIVRENTEGFYADRNLHRGPGEIMVTPDVSLAFRRIT
                     RDASMRIARQAFALAETRGRHVTAVHKANVMRVSDGLFL"
     gene            complement(615..1376)
                     /locus_tag="EYO87_09360"
     CDS             complement(615..1376)
                     /locus_tag="EYO87_09360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018301228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HIC66186.1"
                     /translation="MIPAWFLPDGMTDIVFLVLVATSFAASLITVAFGIGGGGVLLAV
                     MAILVPPAALIPTHGVIQIGSNLGRALITFGRIFWPAIPAFAAGSVIGAAAGGAIVVS
                     LPPAWVQIGVGCFVIWSVIGRPPSGLRDWPLLVGAVSSFLTMFFGATGLFVATYTKSH
                     NLLRHAHVATHATLMTVQHGVKTMAFGLLGFAFAHWLAFVAVMIAAGFLGTLAGKLLL
                     NRIDDHGFRRALDAILIILSIQLIVAGLRKLTLSD"
     gene            1424..>1592
                     /locus_tag="EYO87_09365"
     CDS             1424..>1592
                     /locus_tag="EYO87_09365"
                     /inference="COORDINATES: protein motif:HMM:PF00126.25"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HIC66187.1"
                     /translation="MGAARMRVDYLGLEAFVAIADHGSFHRAADSLSLSQAALSHRLR
                     KIEQDLGAALLI"
BASE COUNT          294 a          528 c          526 g          244 t
ORIGIN      
        1 ccagaaacag accgtcgctg acacgcatca cattcgcctt gtgaaccgcg gtcacatgtc
       61 ggccccgtgt ttccgccagc gcgaaagcct gtcgcgcgat ccgcatcgat gcgtcgcggg
      121 tgatccgcct gaaggccagc gagacgtccg gcgtcaccat gatctcgccc gggccgcgat
      181 gaaggttgcg gtcggcgtag aagccttcgg tattctcgcg aacgatcacc agatccagcg
      241 gcgttccggc acgcgggacg attcccgcgc ggctgcggtc ggggcggata ttggcgaaca
      301 gatccagtct tttgcgcaat tcgcccgacg ggttcagccc gccgtcctcg cgcgtgggat
      361 aggcattgtg cgagaccggg cccaggacga tcccgtcgca gccttcgatg gccttgaacg
      421 ccgtttcggg aaaggtgctg ccggtcgcct ccagggcggc gaaaccgacc tcgatcacgc
      481 ggaatgccag gtccagatca aagcggtcgg acgcggcctc cagcacgacg cgggtcgcgg
      541 cggcgatctc ggggccgatg ccgtcgccgg gcatcagggc aagggtggtt cgtgtcatcg
      601 actttctccg ggcatcagtc agacaaggtc agctttcgca atcccgccac gatcagctgg
      661 atcgacagaa tgatgaggat cgcgtccagg gcccggcgaa agccgtggtc atcgatccgg
      721 ttcagcagca gctttcccgc cagcgtgcca agaaagcccg ccgcgatcat caccgcgaca
      781 aaggccagcc aatgcgcgaa ggcaaagccc agcaggccga aggccattgt cttgacgccg
      841 tgctgcaccg tcatcagcgt cgcgtgggtg gcgacatggg catggcgcag cagattatgc
      901 gatttcgtat aggtggcgac gaacagcccc gtcgccccga agaacatggt cagaaagctg
      961 gacaccgccc ccaccagcag cggccagtcg cgcaatccgc tgggcggtcg cccgatcacc
     1021 gaccagatca cgaaacagcc gacgccgatc tgcacccagg ccggcggtag gctgaccacg
     1081 atggcacctc ccgccgccgc gccgatgacc gagcccgccg cgaaggccgg gatcgcgggc
     1141 cagaagatcc tgccgaacgt gatcagcgcc cggcccagat tcgatccgat ctggatcacg
     1201 ccatgtgtcg ggatcagcgc ggcgggcggc accaggatcg ccatcaccgc cagcaggacg
     1261 ccgccgccgc cgatgccgaa ggccacggtg atcagcgaag ccgcgaagct ggtcgcgaca
     1321 aggaccagaa agacgatgtc ggtcatcccg tcgggcagga accatgcggg gatcatcgcg
     1381 ggcttgcccc tgtgggcgca ggttgtagcc tgtagcccgc cggatggggg cggcgaggat
     1441 gcgcgtggat tatcttggcc tcgaggcctt cgtggcgatc gcggaccatg gctcgttcca
     1501 tcgcgccgcc gattcgctca gcctcagtca ggcggcgctg tcgcatcggc tgcgcaagat
     1561 cgaacaggat ctgggcgcgg cgctgctgat cc
//
LOCUS       DTVW01000708            1638 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1870035, whole
            genome shotgun sequence.
ACCESSION   DTVW01000708 DTVW01000000
VERSION     DTVW01000708.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1638)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1638)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1638
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1870035"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..574)
                     /locus_tag="EYO87_09370"
     CDS             complement(<1..574)
                     /locus_tag="EYO87_09370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009603958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HIC66188.1"
                     /translation="MHLFEHLADCFVAEGVDTCFALLGDANMNWATALAGRGVAMTYV
                     RHEHCAVAAATAFARKSGRVGVATVTCGPGLTQVLTALPAAARARLPLVIFAGEAPLG
                     AAWYNQAIDQAPFIAATGARYRALHHVPRMAEAIRDAFVEAKETRGPVVLGVPFDLQA
                     RQIAPPACLPRPSAEIMPRTGPIPPGSDDLD"
     gene            complement(577..1596)
                     /locus_tag="EYO87_09375"
     CDS             complement(577..1596)
                     /locus_tag="EYO87_09375"
                     /EC_number="5.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008229715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-oxalomesaconate tautomerase"
                     /protein_id="HIC66189.1"
                     /translation="MPQDQQTLSQVLMAIVGAGHPLNIDGIGGGNAVTTKVAMLSPSE
                     RADCDIDYYFAQVAVDRREVDYRPTCGNILVGVGPAAIEMGLIAARDDETVVRIHAVN
                     TGAVVEARIQTPGGQVRYGGSTEIAGVPGSAAPIALGFMETVGSVTGALLPTGRLRDV
                     IDGIEVTCMDVAMPVMMARAADFGLTGHEGQAELDERRDFYDRVEPIRLKAGRMMGLG
                     DVSQSVTPKITLLAAPRHGGTIAARYFMPWSCHPSMAVTGAQCIAACAITPGTVADGL
                     VDSAARGPSPVNIGIEHATGSFDVLVDFRRDGDAVAIRSAGVVRTARLLARGEVLIPA
                     TIWTR"
BASE COUNT          257 a          577 c          572 g          232 t
ORIGIN      
        1 catccagatc gtcgctgccg gggggaatcg gccccgttcg cggcatgatc tccgccgatg
       61 gccggggcag gcatgccggc ggcgcgatct gcctggcctg cagatcgaag ggcacgccga
      121 ggacgacggg gccgcgcgtc tctttcgcct cgacaaaagc gtcgcggatc gcctcggcca
      181 tgcgcgggac gtggtgcaga gcccggtagc gggccccggt cgcggcgatg aagggcgcct
      241 ggtcgatggc ctggttgtac catgccgcgc ccagcggcgc ctcgcccgcg aagatgacca
      301 gcggcagccg ggcgcgcgcg gcggcgggca gggcggtcag gacctgcgtc agccccggcc
      361 cgcaggtcac ggtcgcgaca ccgacccggc cggacttgcg cgcaaaggcg gtcgcggcgg
      421 ccacggcgca atgttcgtgg cggacatagg tcatggcgac cccgcgcccg gcaagcgcgg
      481 tggcccagtt catgttggca tcgcccagca gcgcaaagca ggtatcgacc ccttcggcga
      541 cgaagcaatc ggccagatgt tcgaacagat gcatcctcag cgcgtccaga tggtcgccgg
      601 aatcaggacc tcgccccgtg ccagcaggcg cgcggtgcgg accaccccgg ccgaccggat
      661 cgcgaccgca tcgccatcgc gccggaaatc gaccagcaca tcgaaggacc cggtggcgtg
      721 ttcgatgccg atattgacgg gcgatggccc ccgcgcggcc gaatccacca ggccgtcggc
      781 cacggtgccg ggcgtgatcg cgcaggcggc gatgcattgc gcgccggtca ccgccatcga
      841 gggatggcag gaccacggca tgaaatagcg cgcggcgatg gtgccgccat ggcgcggtgc
      901 ggccagcagg gtgatcttgg gcgtgaccga ttgcgacacg tcgccaaggc ccatcatccg
      961 cccggccttg aggcggatcg gctccacccg gtcatagaag tcgcgccttt cgtccagctc
     1021 ggcctggcct tcatggccgg tcaggccgaa atccgccgcc cgcgccatca tcaccggcat
     1081 ggcgacatcc atgcaggtca cctcgatccc gtcgatgacg tcgcgcagcc tgccggtggg
     1141 cagcaaggcg ccggtgaccg atcccaccgt ttccatgaag ccaagcgcga tcggcgcggc
     1201 actgccgggc acgccggcga tttcggtgct gccgccatat cggacctgac cgcccggcgt
     1261 ctggatccgc gcctcgacca ccgcaccggt attgaccgcg tggatgcgca cgaccgtctc
     1321 gtcgtcccgc gccgcgatca gacccatctc gatcgcggcg ggaccgacgc ccacgaggat
     1381 gtttccgcag gtcgggcggt aatcgacctc gcgccggtcc acggcgacct gcgcgaagta
     1441 atagtcgata tcgcaatcgg cgcgttccga cggcgacagc atcgcgacct tggtggtgac
     1501 ggcgttgccg ccgccgatgc cgtcgatgtt cagcggatgg cctgcgccga cgatggccat
     1561 cagcacctgc gacagcgtct gctggtcctg cggcagatcg ctgcggcgaa gatagggtcc
     1621 gcgcgaggtg ccgccgcg
//
LOCUS       DTVW01000709            2179 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1870349, whole
            genome shotgun sequence.
ACCESSION   DTVW01000709 DTVW01000000
VERSION     DTVW01000709.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2179)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2179)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2179
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1870349"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..729)
                     /locus_tag="EYO87_09380"
     CDS             complement(<1..729)
                     /locus_tag="EYO87_09380"
                     /inference="COORDINATES: protein motif:HMM:PF02569.13"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-phosphopantoate--beta-alanine ligase"
                     /protein_id="HIC66190.1"
                     /translation="MPQPTAPPPTTRTFTCDFIGADSFRVWAFLLRICHSPRRPAPSP
                     RPLAAKNDMLHRSTCAKPALSIRLNPVAGGRWRARMQICRSKQAIRDCVADWRGQGQR
                     VALVATMGALHQGHMRLLDHARDWLDARDGGRIVVSIFVNPTQFEQKADLEKYPRDEE
                     NDLRLLRENGCDAVFMPPVEDIYRPGAQTFVEVSGLSRMLMGRLRPGHFRGMTTIVTK
                     LFNIIGPDASAFGEKDYQQLTIVRQ"
     gene            674..>2179
                     /locus_tag="EYO87_09385"
     CDS             674..>2179
                     /locus_tag="EYO87_09385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_355068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HIC66191.1"
                     /translation="MKSHVKVLVVGGGAVGCGIALHLARAGWDTLLVERDELTAGSTW
                     HAAGLLPLFNMGYATSHIHDYSVRLYAGLEAETGLNAGFTRCGNLRMAQTDARMDEYM
                     LYSATAETIGIEHEFLTPAQIGDRWPLVRTEDLKGALFHPTDGYINPADVTQAMAKGA
                     RMAGCAIERKLQVQGYRWTGSEWIVTCERMAERGGNLVPSGEVFEIRAEHVVTATGNH
                     AQRTARLLGIRIPAIPVEHQFIVTEPDPALLKWRADGNPEHPVLRDADAKWYVREERG
                     GWILGPYEEGAPARFPYEVPDSFRADLFPLDLERIEQEYMSMIHRIPSSEEVGLKDDF
                     NGPICYTPDGNPLVGPAPGLRNMWLAEGFSFGITAAGGVGHYLTQMMTGGEAEIDMAS
                     LDPRRFGSWMTTEYGTRKNEEAYSHVFILHHPDEEREACRPLRTAPAYDRQKARGAQF
                     GQVNGWERPNYYAPAGFDDHAARSFRRGGWWQYAKAEAEALRGAAGLIDATA"
BASE COUNT          390 a          695 c          732 g          362 t
ORIGIN      
        1 ctgccgcacg atggtcagtt gctggtagtc cttttccccg aaagccgagg cgtcgggtcc
       61 gatgatgttg aacagcttgg tcacgatcgt cgtcatgccg cggaaatggc cgggccgcag
      121 gcgccccatc agcatcctgg acaggccgct gacctcgacg aaggtctgtg cgccggggcg
      181 gtaaatgtcc tcgaccgggg gcatgaacac ggcgtcgcag ccgttttcac gcagaagccg
      241 caggtcgttt tcctcgtcgc gcggatattt ctccagatcc gccttctgtt cgaattgcgt
      301 cggattgacg aagatcgaga cgacgatgcg gccgccgtcc cgcgcgtcca gccagtcgcg
      361 ggcgtggtcc agcaagcgca tatgaccctg atgcagcgcg cccatcgtcg ccaccagcgc
      421 cacgcgctga ccctggcccc gccaatcggc gacgcaatcg cgaatggcct gcttgctgcg
      481 gcagatctgc atccgtgccc tccatcgccc cccggccaca gggttcaacc taatggaaag
      541 cgccggtttc gcacaagtgc tgcgatgcag catgtcgttt tttgccgcca aaggtcgggg
      601 cgatggggcc gggcgccggg ggctgtgaca gatacggagc aagaaagccc aaacccggaa
      661 ggagtcggcc ccgatgaagt cgcatgtgaa ggttctggtg gtgggcggtg gcgccgtggg
      721 ctgcggcatc gcactgcatc tggcgcgggc gggctgggat acgctgctgg tcgagcgtga
      781 cgaattgacg gccggatcca catggcatgc ggcgggcctg ctgccgctgt tcaacatggg
      841 ttacgcgacc agccatatcc acgattattc tgtcaggttg tatgccgggc tggaggccga
      901 gaccgggctg aacgcgggct tcacccgctg cggcaacctt cgcatggcgc agaccgacgc
      961 gcggatggac gaatacatgc tgtattccgc cactgccgag acgatcggga tcgagcatga
     1021 attcctgacc cccgcccaga tcggggatcg ctggcccctg gtccggaccg aggatctgaa
     1081 gggcgcgctg ttccacccga ccgacggcta tatcaacccc gccgacgtga cccaggccat
     1141 ggccaagggc gcgcgcatgg ccggctgcgc gatcgaacgc aaactgcagg tgcagggcta
     1201 tcgctggacc ggatcggaat ggatcgtcac ttgcgagagg atggccgaga ggggcggcaa
     1261 cctcgttccg tcgggcgagg tgttcgagat ccgggccgaa catgtggtca ccgcgacggg
     1321 caaccatgcg cagcggaccg cgcggctgct gggcatccgg atccccgcca tccccgtcga
     1381 acaccagttc atcgtgaccg agcccgatcc ggcgctgctg aaatggcggg ccgacggcaa
     1441 tcccgaacat ccggtgctgc gcgatgccga cgccaagtgg tatgtccgcg aggaacgcgg
     1501 cggctggatc ctgggccctt acgaggaagg tgcgccggcg cgcttcccgt atgaggttcc
     1561 cgacagcttc cgtgccgatc tgttcccgct ggatctggaa cggatcgaac aggaatacat
     1621 gtcgatgatc caccgcatcc cgtcctcgga agaggtcggc ctgaaggacg atttcaacgg
     1681 acccatctgt tacaccccgg acggcaaccc gctggtcgga ccggcgccgg gcctgcgcaa
     1741 catgtggctt gccgaaggct tcagcttcgg catcacggcg gcgggcgggg tcgggcatta
     1801 tctgacgcag atgatgaccg ggggcgaggc cgagatcgac atggccagcc tcgatccgcg
     1861 ccggttcgga tcatggatga ccaccgaata cgggacgcgc aagaacgagg aagcctattc
     1921 ccacgtcttc atcctgcacc atcccgatga ggaacgcgaa gcctgccggc ccttgcgcac
     1981 cgcgcccgct tatgaccggc aaaaggcgcg gggcgcgcaa ttcgggcagg taaacggctg
     2041 ggagcggccg aactattatg cgccggcggg tttcgacgac catgctgccc gcagctttcg
     2101 gcgcggcggc tggtggcaat atgccaaggc cgaggccgag gccctgcgcg gcgctgccgg
     2161 cctgatcgac gcgacggca
//
LOCUS       DTVW01000710            1067 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1870958, whole
            genome shotgun sequence.
ACCESSION   DTVW01000710 DTVW01000000
VERSION     DTVW01000710.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1067)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1067)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1067
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1870958"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..379)
                     /locus_tag="EYO87_09390"
     CDS             complement(<1..379)
                     /locus_tag="EYO87_09390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010397697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hybrid sensor histidine kinase/response
                     regulator"
                     /protein_id="HIC66192.1"
                     /translation="MLREDDPPERQVEKLRRITGVLIDRIDRLEETRGSAWSMFQAAV
                     ALEQEVMARTRELEKAMADLSQRNRELAVARAAAEEANRSKTRFLRAASHDLLQPLSA
                     ARLFLAALADTRLDEAQRELTDRL"
     gene            complement(369..>1067)
                     /locus_tag="EYO87_09395"
     CDS             complement(369..>1067)
                     /locus_tag="EYO87_09395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018633503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GfdT"
                     /protein_id="HIC66193.1"
                     /translation="AALPSVPVLGGSAGDGLDFRRTTLLARGHTLSDAAIFLLVETDL
                     AISEVTFAHFSPTETRAVVTAAIPEKRRILELNAEPAADEYARLTGIARDRLTPTEFA
                     RRPLLLRTGRRHHVRAISEVTEDGGLSLMSAIDTGTVLTLGRAEDMTQGFLQALSALP
                     RPPLMVLGFDCILRRLALERAGLATVMSDLFTRFRVAGFNTYGEQHSGMHVNQTFVGL
                     AFMDHGAPGDSHAA"
BASE COUNT          166 a          363 c          376 g          162 t
ORIGIN      
        1 ccagccggtc ggtcagttcg cgctgcgcct cgtccagcct agtatcggcc agcgcggcca
       61 gaaacagccg cgccgccgaa agcggctgca acagatcgtg gctggccgcg cgcaggaagc
      121 gggtcttgga ccggttggcc tcttcggcgg cggcgcgggc cacggccagt tcgcggttgc
      181 gctgcgacag gtcggccatg gccttttcca gctcgcgcgt gcgggccatg acctcttgtt
      241 ccagcgcgac cgcggcctga aacatcgacc aggccgagcc gcgggtttcc tcgagccggt
      301 cgatgcggtc gatcagcacg ccggtgatgc ggcgcagctt ttcgacctgt cgctcgggcg
      361 ggtcgtcctc acgcagcatg gctgtcgccg ggcgccccgt gatccatgaa ggcaagaccc
      421 acgaaagtct ggttcacgtg cattccgctg tgctgttcgc cataggtgtt gaaacccgcg
      481 acgcggaagc gggtgaacag atccgacatc accgtcgcca gcccggcccg ttccagcgcc
      541 agccgccgca ggatgcagtc gaagcccaga accatcagcg gcgggcgcgg cagggccgac
      601 agcgcctgaa ggaaaccctg ggtcatgtcc tcggcccgac ccagggtcag cacggtgccg
      661 gtatcgatcg ccgacatcag cgacaggccg ccatcctcgg tcacttcgct gatggcgcgg
      721 acatggtggc ggcgcccggt gcgcagcagc agcgggcggc gcgcgaattc ggtgggcgtc
      781 agccggtcgc gggcaatgcc ggtcaggcgg gcatattcat cggcggccgg ctctgcgttc
      841 agttccagga tccggcgctt ttcggggatc gccgcggtca cgacggcacg cgtctcggtc
      901 gggctgaaat gggcgaatgt cacctcgctg atcgccagat cggtctcgac cagcaggaag
      961 atcgccgcgt ccgacagggt gtgaccccga gccagcaggg tggtgcggcg gaaatccagc
     1021 ccgtcgcccg ccgatccgcc caggaccggg accgagggca gggccgc
//
LOCUS       DTVW01000711            1107 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1871499, whole
            genome shotgun sequence.
ACCESSION   DTVW01000711 DTVW01000000
VERSION     DTVW01000711.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1107)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1107)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1107
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1871499"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>1107
                     /locus_tag="EYO87_09400"
     CDS             <1..>1107
                     /locus_tag="EYO87_09400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_353521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="translational GTPase TypA"
                     /protein_id="HIC66194.1"
                     /translation="VCLLVDAAEGPMPQTKFVTSKALALGLRPIVVLNKVDKPAAEPD
                     DALNDVFDLFANLGASDEQLDFPHLYASGIGGWCDETLDGPRKDMTALFDLILRHVEP
                     PKQISRTDEPFQMLATTLGADNFLGRLLTGRVEAGHARAGDTVKALARDGARIEQFRI
                     SKVLAFRGLTQQSVDEARAGDIVTLAGMAKATVADTICAPEVETALPSQPIDPPTISV
                     TFGINDSPLAGRDGSKVQSRVIRERLMKEAESNVAIKVEDTPGGEAFVVSGRGELQMG
                     VLIENMRREGFELSISRPRVIFREEDGQRLEPVEEVIIDVEDDYTGVVIEKLTGDRKG
                     DMVDMRPAGLGKTRIVAHVPSRGLIGYHGEFMTD"
BASE COUNT          209 a          361 c          362 g          175 t
ORIGIN      
        1 gcgtctgcct gctggtcgat gccgccgagg gcccgatgcc acagaccaag ttcgtgacat
       61 ccaaggcgct ggcgcttgga ctgcgcccga tcgtcgtgct gaacaaggtg gacaagcccg
      121 ccgccgaacc cgatgacgcg ctgaacgatg tcttcgacct gttcgccaat ctcggcgcct
      181 cggatgaaca actggatttt ccgcatctct acgcctcggg catcggcggc tggtgcgacg
      241 agacgctgga cggtccgcgc aaggacatga ccgccctgtt cgacctgatc ctgcgtcatg
      301 tcgagccgcc gaagcaaata agccgcaccg acgagccctt ccagatgctg gccacgacgc
      361 tcggggccga caactttttg ggacgattgc tgaccggccg ggtcgaggcc ggtcacgcca
      421 gggctggcga tacggtgaag gcactggcgc gcgacggcgc gcggatcgaa caattccgca
      481 tcagcaaggt gctggccttc cgcggcctga cccagcaatc cgtggacgag gcacgggccg
      541 gcgacatcgt gacgctggcc ggaatggcca aggccacggt ggccgacacc atctgcgccc
      601 ccgaggtcga gaccgccctg ccctcgcagc cgatcgaccc gcccacgatc agcgttacct
      661 tcggtatcaa cgacagcccg ctggccggcc gcgacggcag caaggtgcaa tctcgcgtca
      721 tccgcgagcg gctgatgaaa gaggccgaat cgaatgtcgc gatcaaggtc gaggacacgc
      781 ccggcggcga ggctttcgtg gtctcggggc gtggcgaatt gcagatgggc gtcctgatcg
      841 agaacatgcg tcgcgaaggg ttcgaattgt cgatcagccg cccccgcgtg atcttccgcg
      901 aggaagacgg ccaacgcctg gaaccggtcg aggaagtcat catcgatgtc gaggacgact
      961 acaccggcgt cgtgatcgag aagctgaccg gggaccgcaa gggcgatatg gtcgacatgc
     1021 gtcccgcggg cctcggcaag acccgcatcg tggcccatgt tccctcgcgc gggctgatcg
     1081 gctatcacgg cgaattcatg accgaca
//
LOCUS       DTVW01000712            2275 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1873112, whole
            genome shotgun sequence.
ACCESSION   DTVW01000712 DTVW01000000
VERSION     DTVW01000712.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2275)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2275)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2275
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1873112"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..521
                     /locus_tag="EYO87_09405"
     CDS             <1..521
                     /locus_tag="EYO87_09405"
                     /inference="COORDINATES: protein motif:HMM:PF06299.10"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF1045 domain-containing protein"
                     /protein_id="HIC66195.1"
                     /translation="GTIKAPFRLAEGCSIATIESRMERLCASLAPVALPAMQLACEAG
                     FVALRPVAPSEALARLALAVVRHLDDLRAPLTATEIARRRPESLSPRQRGNLDRWGYP
                     HVAEDFRFHLTLTGPVDGAEGRAIVAALAPILQPALPRPFPIDRLCLFQQPEGGRFRQ
                     IGVWSLTGTAKG"
     gene            887..>2275
                     /locus_tag="EYO87_09410"
     CDS             887..>2275
                     /locus_tag="EYO87_09410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66196.1"
                     /translation="MTNPRFSFFVVPSGACLSARQLSMQFDLALADLIRPYLLKGEST
                     AWHAALSVIYVESYEAAASDDGTVIRGIARFSGNVDPPSYDPVTGTLRAGAANTEGHP
                     RSQPDRREPWLDITDARVEFALTVPRAAGQIVAAGVASVPGGATAFQPVRNLLSALDA
                     IPTDAPPSDYPGTGFTLDMVLSGIEIRPPFLKPAKMEANGLLVPDDSRPDVVFHLPRV
                     KLRLSQGSGNNAVLDVALVSLGVAGLDDPGDLAAVEMIRMQPAYAFIGSGRVVGFAFR
                     SAFLDLADGYTPPEVLDQFGFDESWTGLFLPEVRIFFAPNGAEDFAVNAGVENLLIGL
                     GQSSGITGDFDVAVINQGSGDLALSARFFDPEGRAIGITRLTDTTAEARLPATTRMVV
                     DVTGGRAPFTVNANFDGADHAGMLHSMTATAAAKTVTITARDTSSPVKQKVLSIRVML
                     RQAISVEPAPGAL"
BASE COUNT          357 a          761 c          703 g          454 t
ORIGIN      
        1 acggcaccat caaggcgccg ttccggctgg ccgagggttg cagcatcgcc acgatcgaaa
       61 gccggatgga gcggctttgc gccagcctcg cgccggtcgc gctgcccgcg atgcagttgg
      121 cttgcgaggc cggtttcgtc gccctgcgcc cggtcgcgcc ctccgaggcg ctggcacggc
      181 tggcccttgc cgtggtgcgg catctggacg accttcgtgc gcccttgacc gcgaccgaaa
      241 ttgcccggcg ccgccccgaa agcctgtctc cgcgacagcg cggcaatctc gatcgctggg
      301 gctatcccca tgtggccgag gatttccgct ttcacctgac cctgaccggt cccgttgacg
      361 gggccgaggg ccgcgccatc gtggccgcgc tggccccgat cctccagccg gccctgcccc
      421 gcccctttcc gatcgaccga ctttgcctgt ttcagcagcc cgagggcggc cgctttcgcc
      481 agatcggggt ctggtcactg accggaacag cgaagggctg agtcgcgcga tccggatcac
      541 gccggctgcc acgaagtatc gggcagccgg ccgcgatgcc cggatcccaa cccgaaagga
      601 atgctttgtg cctgcaaagt ttttttggcc cggcgccgga ccgttttcca aagcagaatg
      661 tcatgcgcct gcgcccgata tcatcgaccc gaaccggccc gtccgcagcc tgccaccagc
      721 gactttgatc ccggggtccg ttttttacga ttgaacttca atgatatgat aaacctatat
      781 caaatattcc tccagaacac tcctgcaata aaaacgttta ggttatttaa gcacaagcaa
      841 aataatttga ctgaaatatt ttgtcgtatt aatattgatt tatcgggtga ccaatccgcg
      901 tttttcgttc ttcgtggtgc cctccggggc atgtctttca gcacggcagc tttcgatgca
      961 gttcgacctg gctcttgccg acctcatccg cccctatctt ctgaagggtg aatcgacggc
     1021 gtggcacgcc gccctgtcgg tgatctatgt ggaaagctac gaggcggcgg ccagcgatga
     1081 tggcacggta atccgcggga ttgcgcggtt ttccggcaat gtcgacccgc ccagctacga
     1141 tcccgtgacc ggaaccttgc gggccggcgc ggcgaatacc gaaggccatc cccgcagcca
     1201 gcccgaccgt cgcgagccct ggcttgacat caccgatgcg cgggtcgagt tcgcgctgac
     1261 cgttccgcgc gccgcagggc agatcgtggc ggcgggcgtc gcctcggttc ccggtggcgc
     1321 caccgccttt cagccggtgc gcaacctgct ttcggccctg gatgcgattc cgaccgatgc
     1381 gccgccctcg gattatcccg gaaccggctt cacgctggac atggtcctgt cgggaatcga
     1441 gatccgtccg cctttcctga aacctgcgaa gatggaggcc aacgggcttc tggttcccga
     1501 cgattcgcgc cccgatgtcg tctttcatct gccaagggtg aagctgcgcc tgtcgcaggg
     1561 ttcgggcaac aacgcggttc tggacgtggc gctggtgtcg ctgggtgtgg cggggctgga
     1621 cgatcccggc gacctggcgg cggtcgagat gatccggatg cagcccgcct atgccttcat
     1681 cggcagcggc cgcgttgtgg gcttcgcctt ccgatcggcc tttctggatc tggccgacgg
     1741 ctataccccg cccgaggttc tggaccagtt cggctttgac gaaagctgga ccgggctctt
     1801 cctgcccgag gtgcggatct tctttgcgcc caacggggcc gaggatttcg ccgtcaatgc
     1861 cggggtcgaa aacctgctga tcggtctggg ccaatcctcg ggcatcaccg gcgatttcga
     1921 tgtggcggtg atcaatcagg ggtcgggaga tctggccctg tcggcccggt tcttcgaccc
     1981 cgagggccgc gccatcggca tcacccgtct gaccgacacc accgccgagg cccgcctgcc
     2041 cgcaacgacc cgcatggtcg tcgatgtcac cggcgggcgt gcgcccttta ccgtcaatgc
     2101 gaatttcgac ggtgccgatc acgccggaat gctgcattcg atgacggcga ccgcggccgc
     2161 caagacggtc acgatcacgg cgcgcgacac ctcgtccccg gtcaagcaga aggtgttgtc
     2221 catccgcgtc atgctgcggc aggcgatctc ggtcgagcct gcgcccggcg cgctg
//
LOCUS       DTVW01000713            1816 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1873990, whole
            genome shotgun sequence.
ACCESSION   DTVW01000713 DTVW01000000
VERSION     DTVW01000713.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1816)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1816)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1816
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1873990"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..849)
                     /locus_tag="EYO87_09415"
     CDS             complement(<1..849)
                     /locus_tag="EYO87_09415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014876230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin"
                     /protein_id="HIC66197.1"
                     /translation="MKKALIASTALVMTAGIAAADVTISGYGRTGVLYQEDGVRGDNT
                     NNSVVQSRLRLNIDASTSSDAGVDFGGRIRMQWDQGDEDTTLAPGYLYVTASGLRVEI
                     GNSNTAYDSAALLYAPEIGVYDRSFGDSRGAFYAYNTDGYPRASNNLGEDMLLNDYLG
                     IFVSYSVGDFTARASVIDPNQVSSIDGLEKEYSVSANYTWNERLELSAAAAKNGKSID
                     GNDQYFLGARYKFNDMGRAGLNWIDNGETAGGADLGKTIVIYGDYMVAPMTTINGYIA
                     NNDADGN"
     gene            1119..1577
                     /locus_tag="EYO87_09420"
     CDS             1119..1577
                     /locus_tag="EYO87_09420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013066005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3576 domain-containing protein"
                     /protein_id="HIC66198.1"
                     /translation="MNTARAARLTLVMILSAALSACGGAASSDRDVRPDERRTTIWDL
                     FRNNENPNNTVGVNKYLWNASLDVLNFLPVQSIDPFTGVIVTGYGTPPGGGRSYRATI
                     KVSDPALDARSLKLSLQGPGGAAVEPGTVRVVEDAILTRARQLRIQDGRL"
BASE COUNT          322 a          567 c          587 g          340 t
ORIGIN      
        1 gttgccgtcg gcgtcgttgt tggcgatgta gccgttgatc gtcgtcatcg gggcgaccat
       61 gtaatcgcca tagatcacga tggtcttgcc cagatcggcg ccgccggcgg tttcgccgtt
      121 gtcgatccag ttcagacccg cgcggcccat atcgttgaac ttgtagcgcg cgcccaggaa
      181 atactggtca ttgccgtcga tcgacttgcc gtttttggca gcggcggccg acagttccag
      241 acgctcgttc caggtatagt tcgccgaaac gctgtattct ttttccaagc cgtcgatcga
      301 gctgacctgg ttcgggtcga tgaccgaggc gcgggcggtg aagtcgccga ccgaatagga
      361 cacgaagatg cccagataat cgttcagcag catgtcctca ccgaggttgt tgctggcgcg
      421 cggatagccg tcggtgttgt aggcatagaa cgcgccgcgc gaatcgccga acgaccggtc
      481 gtagacgccg atttcgggcg catagagcag cgcggccgaa tcataggcgg tgttcgagtt
      541 gccgatctcg acgcgaaggc cgctggcggt cacgtagagg tagcccggcg caagcgtcgt
      601 gtcttcgtcg ccctgatccc actgcatgcg gatccggcca ccgaaatcga caccggcatc
      661 ggacgaggtc gacgcatcga tattcaggcg caggcgcgac tggacgaccg agttgttggt
      721 attgtcgccg cggacgccgt cttcctgata aagcacaccg gtccggccgt agcccgagat
      781 cgtcacgtcg gcggcggcga tgccggcggt catgaccagc gcggtggagg cgataagagc
      841 ctttttcatg gtgatgttcc ctcttgtctc tctgatgccc aggacgcatg gaccaccctg
      901 ggtatggatc gtgtttcctt ctttcgccga tgtgatgcaa cggaatcacg gaggggctga
      961 aatctttacc caaatctgtg atgcacatgg gccacacttg cgtgatcgcc gccgtccagg
     1021 cccgcgaacg ggtccgtccc gccgccgccc caaggcgctt gtggcgcggg ggcgatccgc
     1081 gctaaggctt ctgtcgacgc gaagaaccgg gggacaccat gaacaccgca cgcgccgcgc
     1141 gactgacgct ggttatgatc ctgagcgccg ctctttccgc ctgtggcggc gctgcctcaa
     1201 gcgaccggga cgttcgcccc gatgagcgca ggacgacgat ctgggatctg tttcgcaaca
     1261 acgagaatcc gaacaacacc gtcggcgtga acaagtatct gtggaacgcc agcctggatg
     1321 tgctgaactt cctgccggtc cagtcgatcg acccctttac cggcgtgatc gtgaccggtt
     1381 acggcacgcc tccgggcggc ggccggtcgt atcgcgcgac gatcaaggtc agcgatccgg
     1441 cgctggatgc gcgcagcctg aaactgtcgc tgcagggacc gggcggcgcg gccgtcgagc
     1501 cgggaaccgt ccgcgtggtc gaggatgcga tcctgacccg cgcgcggcag ctgcggatcc
     1561 aggacgggcg gctctagggc ctgccgggcg aggctggacc cgccaatcgc cgccgtataa
     1621 acacggcggc gaagaacgac gccagacagg tccgcacgat gccctatgat cccgcccgca
     1681 gcgaagccca ctggcagacg acctgggccg atgccggcag ctttgccgcc acccgcgacg
     1741 cgcggccgaa atattatgtg ctcgagatgt ttccctatcc ttcgggacgc atccatatgg
     1801 ggcatgtgcg caacta
//
LOCUS       DTVW01000714            1743 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1875279, whole
            genome shotgun sequence.
ACCESSION   DTVW01000714 DTVW01000000
VERSION     DTVW01000714.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1743)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1743)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1743
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1875279"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..716)
                     /locus_tag="EYO87_09425"
     CDS             complement(<1..716)
                     /locus_tag="EYO87_09425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010398443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HIC66199.1"
                     /translation="MAPFPAPGPARGGGAGKAPPRAPAEIRALARSPRASFLHGMIAT
                     TPFLIVVVPFALLFGVMSQEAGMDLAQTMGFSILVFAGASQFTAVQLISDQAPALLVI
                     LSGLAVNLRMAMYSASLVPWLRGASAGKKVLIAYLLIDQSFALSLQHYERHPRLTLPQ
                     RLAYFFGSATLLCLPWSLATWAGATLGRAIPDDIALDFAMPITFLAMIAPMLRTPAHL
                     AACGVAIVRALGFAGLPSGLG"
     gene            571..1272
                     /locus_tag="EYO87_09430"
     CDS             571..1272
                     /locus_tag="EYO87_09430"
                     /inference="COORDINATES: protein motif:HMM:PF00583.23"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HIC66200.1"
                     /translation="MRNGVVAIMPCKKDARGLRASARISAGARGGALPAPPPRAGPGA
                     GKGAMALSFTDGSRHLACMTRNRTQDRPVTLESPISAAHLPAAAALWGRHFACPRAAL
                     TARSVCARHGIVALNATGRVVGVAGFRDAGGGFLRRAPWWGGLFYRDAPATAALVIDG
                     IVALPRGEGVGRALIRAALAEAGRQARPGLRAEVRGRNADALRFYRRLGFVEEGRGRY
                     GWAWSGQALLMRLPA"
     gene            1342..>1743
                     /locus_tag="EYO87_09435"
     CDS             1342..>1743
                     /locus_tag="EYO87_09435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008032279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase I"
                     /protein_id="HIC66201.1"
                     /translation="MTSDAPAFGKGCNLHLIDGSAFIFRAYHALPPLTRKSDGLPVGA
                     VAGFCNMLWKYVTDEHGSDAPTHAAVIFDHSAKTFRNEIYNAYKANRPDPPEDLRPQF
                     PLTRDATRAFNIACIETEGYEADDIIAALACK"
BASE COUNT          287 a          603 c          601 g          252 t
ORIGIN      
        1 cccagccccg agggcaggcc cgcgaagccc agcgcccgca cgatcgccac cccgcaggcc
       61 gccagatgcg cgggcgtgcg cagcatcggc gcgatcatgg ccagaaaggt gatcggcatg
      121 gcaaaatcca gcgcgatgtc atccgggatg gcgcggccca gcgtggcgcc ggcccatgtc
      181 gcaaggctcc agggcaggca cagcagggtc gcgctgccga agaaataggc cagacgctgc
      241 ggcagcgtca gccggggatg gcgttcgtag tgctgcaagg acagggcaaa gctttgatcg
      301 atcagcagat aggcgatcag caccttcttg ccggccgaag ccccgcgcag ccatggcacc
      361 agcgaggccg aatacatcgc catgcgcaga ttgaccgcca gtcccgacag gatcaccagc
      421 agcgcgggcg cctggtcgct gatcaactgg accgcggtga attgcgaggc gcccgcgaag
      481 accaggatcg aaaagcccat ggtctgcgcc agatccatcc ccgcctcttg cgacatgacc
      541 ccgaaaagca gcgcgaaggg cacgaccacg atgagaaacg gcgtcgtggc gatcatgcca
      601 tgcaagaagg atgcgcgcgg gctgcgggcc agcgcgcgaa tctcggccgg cgcccggggc
      661 ggcgctttgc cggccccgcc accgcgggcc ggccctgggg cgggaaaagg tgccatggca
      721 ctttcattca cggacggttc gcgccacctt gcttgcatga cgcgcaaccg gacgcaagac
      781 cgacccgtga ccctcgaaag cccgatttcc gcggcgcatc tgccggcggc agccgccctg
      841 tgggggcgcc acttcgcatg tccgcgcgcg gcgctgacgg cgcgcagcgt ctgtgcgaga
      901 catggaatcg ttgcgttgaa cgccaccggc cgtgtcgtcg gcgtggccgg ctttcgcgat
      961 gcggggggcg gtttcctgcg ccgggcgccg tggtggggcg gcctgttcta ccgtgacgcg
     1021 cccgccaccg ccgcgctggt gatcgacggt atcgtggcgc tgccgcgtgg cgagggggtg
     1081 ggccgcgcgc tgatccgcgc cgctctggcc gaggcgggca ggcaggcccg ccccggcctg
     1141 cgggccgagg tgcgcggccg gaacgcggat gcattgcggt tctatcgccg tctgggcttt
     1201 gtcgaggagg ggcgcgggcg ctatggctgg gcctggtcgg ggcaggccct gctgatgcgg
     1261 ctgccggcct gatcgcccct ttgcgcccgg cccggctttc tgccagaacg gtgccgcgac
     1321 tgtcgcgaaa ggaatgccgc catgacctcg gacgcgcccg ctttcggcaa gggctgcaat
     1381 cttcatctga tcgacggatc ggccttcatc ttccgcgcct atcacgcgct gccgccgctg
     1441 acgcgcaagt cggacgggct gccggtgggc gcggtcgcgg ggttctgcaa catgctgtgg
     1501 aaatacgtca ccgacgaaca tggcagcgat gcgccaaccc atgcggcggt gatcttcgac
     1561 cattccgcca agaccttccg caacgagatt tacaacgcct acaaggccaa ccgccccgat
     1621 ccgcccgagg atctgcgccc gcaattcccg ctgacccgtg acgccacccg cgccttcaac
     1681 atcgcctgca tcgagaccga aggctacgag gccgacgaca tcatcgccgc gctggcctgc
     1741 aag
//
LOCUS       DTVW01000715            2475 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1876062, whole
            genome shotgun sequence.
ACCESSION   DTVW01000715 DTVW01000000
VERSION     DTVW01000715.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2475)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2475)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2475
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1876062"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..772
                     /locus_tag="EYO87_09440"
     CDS             <1..772
                     /locus_tag="EYO87_09440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018185196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="GMC family oxidoreductase"
                     /protein_id="HIC66202.1"
                     /translation="RADLPGVGANLIDHPEVPISARVTGRRGYYRQGQGWRMLRNGLQ
                     FKLFGSGPVTSAGVEAGAFVNPRDPAAPPTIQAFCVPIVYVDRDSRETVRDGYGLTVT
                     TVVIKPRSRGWVRLASADPADMPLVNPALLSDPGDMDEMVAGQRFFLRAFEQSPLAEI
                     VDSMILPDGAMSDAALREHCRRQVKTNYHPAGSARMGADGDPGAVLTPRMTVRGVDGL
                     HVCDMSAVPDINAGNTNAVAMMLGDRCADFLLDRLRAV"
     gene            825..1550
                     /locus_tag="EYO87_09445"
     CDS             825..1550
                     /locus_tag="EYO87_09445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018690315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FCD domain-containing protein"
                     /protein_id="HIC66203.1"
                     /translation="MEMPEQDRKTARAADAIVAAVEARIASGGLKDGAPLPAERALME
                     EFGASRTVVREAITALSNRGLIDARPRFRPVVRRIGYQSVIDATSPVIRRLLSEKDGV
                     RNLYKTRVFVERLLVRDAALDADREDIRRLKEALARNADAIEDSDAFYATDVSFHRVL
                     YEISGNPVFTAIHEGFVAWLSPQWARMERSPERNRRNHAAHEQIYTAILERDPDRAEA
                     ALEHHLAAAWDFVSTTFFPEDPD"
     gene            complement(1567..2337)
                     /locus_tag="EYO87_09450"
     CDS             complement(1567..2337)
                     /locus_tag="EYO87_09450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011575334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HIC66204.1"
                     /translation="MFDPTSFSLAGKTALVTGAKRGIGRGMAEALAAAGADIVGVSAT
                     MTRDGGETGDSVRGLGRQFSGHACDFADRAAVHDLARQVHADHPRIDILINNAGTIRR
                     APAVEHGDDIWDEVIEVNLSAQFVLTREIGRSMVERGSGKVIFTASLLTFQGGITVPG
                     YAASKGGIGQLTMAFANEWAGKGVNVNAIAPGYIATDNTEALRNDPERHDAILGRIPA
                     GRWGKPEDFGGPVVFLASDAAAYVHGAILTVDGGWMGR"
BASE COUNT          418 a          826 c          811 g          420 t
ORIGIN      
        1 gcgcgccgat ctgcccggcg tcggcgcaaa cctgatcgac catcccgagg tgccgatctc
       61 ggcgcgcgtc accgggcgcc gcggctatta ccgacagggc cagggctggc ggatgctgcg
      121 caacgggctt cagttcaagc tgttcggttc cggtccggtg acttcggcag gggtcgaggc
      181 gggcgccttc gtcaacccgc gcgaccccgc tgccccgccg acgatccagg ctttctgcgt
      241 tcccatcgtc tatgtggacc gcgacagtcg cgagacggta agggatggct atgggctgac
      301 cgtgacgacg gtggtgatca agccgcgttc gcgcggatgg gtgaggctgg catccgccga
      361 tccggccgac atgccgctgg tcaaccccgc cttgctgtcg gatccgggcg acatggacga
      421 gatggtggcc ggtcagcggt tcttccttcg cgctttcgag caatcgccat tggccgagat
      481 tgtcgacagc atgatcctgc ccgacggcgc catgtccgat gcggcgctgc gcgagcattg
      541 ccgacgacag gtcaagacga actatcatcc ggccggcagc gcgcgcatgg gcgcggatgg
      601 cgatcctggg gcagtgctga cgccgcggat gacggtgcgc ggcgtcgatg ggctgcatgt
      661 ctgcgacatg tcggcggtcc ccgacatcaa cgccggcaac accaacgccg tggcgatgat
      721 gctgggcgac cgctgcgccg acttcctgct ggatcgcctg cgcgccgtct gacaggatcg
      781 attcgcctct cgatccgggt gaccgaaaaa ggtaggagac accgatggaa atgcctgagc
      841 aggatcggaa gacggcgcgc gcggccgacg cgatcgtcgc ggccgtcgaa gcgcgcatcg
      901 cctctggcgg attgaaggac ggcgcgcccc tgccggccga acgcgcgctg atggaggaat
      961 tcggagccag ccggacagtg gtgcgcgagg cgatcacggc cctgtccaac cgcggtctga
     1021 tcgacgcccg gccacgcttc aggccggtgg tgcgacgcat cggctatcag tcggtgatcg
     1081 acgccaccag ccccgtcatc cgccgcctgc tgtccgaaaa ggacggggtt cgcaacctct
     1141 acaagacccg tgtcttcgtc gaacggcttc tggtgcgcga cgccgcgctt gacgccgacc
     1201 gcgaggatat caggcggctc aaggaggcgc tggccaggaa cgccgacgcg atcgaggatt
     1261 ccgatgcctt ctatgcaacg gatgtctcat ttcaccgggt gctgtacgag atttcgggaa
     1321 acccggtctt caccgcgatt cacgaaggct ttgtcgcctg gctgtcgccg caatgggccc
     1381 ggatggagcg gtcgccagaa cgcaaccgtc gaaaccatgc cgcccatgaa cagatttaca
     1441 cggctatcct tgaacgcgac cccgaccgcg ccgaggccgc gctggaacat catctcgcgg
     1501 cggcgtggga ctttgtcagc accaccttct tccccgagga tccggactag ggacatgaac
     1561 gggccgtcag cgtcccatcc agccgccatc aaccgtcagg attgcgccat ggacataggc
     1621 agcggcgtcc gaggccagaa acacgacagg cccgccgaaa tcctccggct tgccccagcg
     1681 gcccgccgga atgcggccaa ggatcgcatc gtgacgttcg ggatcgtttc tcagtgcctc
     1741 ggtattgtcg gtggcgatat agccgggcgc gatggcgttc acgttcaccc ccttgccggc
     1801 ccattcgttc gcgaacgcca tcgtcagctg accgatcccg ccctttgagg cggcatagcc
     1861 cgggaccgtg atcccgccct gaaaggtcag cagcgaggcc gtgaagatca ccttgcccga
     1921 cccgcgttcg accatgctgc gaccgatctc gcgcgtcagc acgaactggg ccgacaggtt
     1981 cacctcgatc acctcgtccc agatgtcgtc gccatgttcg accgcgggtg cgcggcggat
     2041 ggtgccggca ttgttgatca ggatgtcgat ccgcgggtga tcggcgtgaa cctgacgggc
     2101 aaggtcatgc accgccgccc ggtcagcgaa gtcgcaggca tggcccgaaa actgccggcc
     2161 cagcccgcga acgctgtcac cggtctcgcc gccgtcccgt gtcatcgtgg cgctgacacc
     2221 gacgatatcg gcgccggcgg cggccagcgc ctcggccatg ccgcgaccga tgccccgctt
     2281 tgccccggtc acaagcgccg tcttgccggc aaggctgaaa gaggtgggat cgaacatcag
     2341 gcgacctcct tgcccacgcg gataagcgtc ttcatcgagt tcggattttc ggtcagggcc
     2401 ttgaacgcgt cctgcaattc ggtcagcggg cggatgtcgg tgatcagggc ctcggcgccg
     2461 aaaccttcgt ccagc
//
LOCUS       DTVW01000716            1422 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1876181, whole
            genome shotgun sequence.
ACCESSION   DTVW01000716 DTVW01000000
VERSION     DTVW01000716.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1422)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1422)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1422
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1876181"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..731)
                     /locus_tag="EYO87_09455"
     CDS             complement(<1..731)
                     /locus_tag="EYO87_09455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012435766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrase"
                     /protein_id="HIC66205.1"
                     /translation="MDAASADASTAFPDAASLAALRAWHAGLSSRQAVAQYLGQERAR
                     GQSSRAVLGRIRRRLAALARERGRDDLTALFEMPASERVAQGRAADRAIEVLRTLPTP
                     RPAITDDIGRWLPARAVAALRAHGIETLAALTVRVPRRRRWWAAIPRLGAASARQIEA
                     FFAAHPELTERARALIVQERRSVVVPWEQLRLPHEVDGSQGRFRAPRESCTLTADNDY
                     EAVQAWLALHESPATHRTYRKEAERL"
     gene            complement(940..>1422)
                     /locus_tag="EYO87_09460"
     CDS             complement(940..>1422)
                     /locus_tag="EYO87_09460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012435767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component sensor histidine kinase"
                     /protein_id="HIC66206.1"
                     /translation="HGITLPNEESIHVGDEARALFDFYDALAEDKGVQLRLQGDASIV
                     GDRLMLRRALSNLLSNALRYTPSGKAIVIKACEQDGGATIVVENQGEGIDPELLPSLF
                     DRFFRADKSRARADSDSVGLGLSITQAIMVAHRGGISAESSGGLTRFILTFPRRQPRA
                     "
BASE COUNT          233 a          484 c          481 g          224 t
ORIGIN      
        1 agccgttccg cttccttgcg gtaggtgcga tgagtggcgg gcgactcgtg cagggccagc
       61 caggcctgca ccgcctcgta gtcgttgtcc gcggtcaagg tgcagctctc gcgcggtgcg
      121 cgaaaccgcc cttgcgagcc gtcgacttca tgaggcaggc gcaactgctc ccatggcacg
      181 acgacgctgc gtcgctcctg cacgatcaac gcgcgcgccc gttcggtcag ctcgggatgc
      241 gcggcgaaga acgcctcgat ctgcctggcg ctggcagcgc ccagcctcgg gatggccgcc
      301 caccagcggc ggcgcctggg cacgcgcacg gtcaacgccg ccagcgtctc gatgccgtgg
      361 gcgcgcaagg cggcgacggc gcgggccggt agccagcggc cgatgtcgtc ggtgatcgca
      421 ggccgtggcg tcggcagcgt gcgcaggacc tcgatagcac ggtcggccgc cctgccctgc
      481 gccacccgct ccgacgccgg catctcgaac aacgcggtca gatcgtcgcg gccgcgctcg
      541 cgtgccagcg cggcaagccg gcggcgaatg cgaccgagca cggcgcgcga ggattggccg
      601 cgcgccctct cctgccccag gtattgcgcc acggcttgtc gggagctcag gccggcatgc
      661 caggcgcgca gcgcggccag ggaggcggca tcggggaatg ccgtggaggc atcggccgag
      721 gccgcatcca taccggcgct ggcggcagat gcggagttag ttagggtcag gcgcgatttc
      781 atgggggcca gtttagcgca cccaaatggc tattacgata agaacactta tctcaatagc
      841 gtcgctattg gcagcgggat ccggcacatg gcctaacagt atgccgatct tgctggcatc
      901 agcacgtgcc tcgcagctcg ccatggggga ccggcctccc taagctcgtg gctggcgccg
      961 cgggaaggtc agaataaagc gggtgagacc gcctgacgac tcagccgaga ttccaccgcg
     1021 gtgcgccacc atgatggctt gcgtgatcga caagccaagc cccacgctgt ccgaatcagc
     1081 gcgcgccctg gacttgtcgg cccgaaagaa ccggtcgaac aacgacggca acagctcggg
     1141 atcgatcccc tcgccctggt tctcgaccac gatggtggcg ccgccgtctt gctcgcatgc
     1201 cttgatcaca atcgctttgc cgctgggcgt ataccgcagt gcgttcgaca gcagattgct
     1261 cagtgcgcgg cgcaacatca ggcgatcgcc cacgatgctg gcgtcgccct gcaggcgcag
     1321 ctgcacaccc ttgtcctcgg ccaaggcgtc gtagaaatca aacagcgcgc gggcctcgtc
     1381 gccgacatgg atcgactcct cgttgggcag cgtgatgccg tg
//
LOCUS       DTVW01000717            2581 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1876716, whole
            genome shotgun sequence.
ACCESSION   DTVW01000717 DTVW01000000
VERSION     DTVW01000717.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2581)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2581)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2581
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1876716"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(342..2570)
                     /locus_tag="EYO87_09465"
     CDS             complement(342..2570)
                     /locus_tag="EYO87_09465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012317901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin acylase family protein"
                     /protein_id="HIC66207.1"
                     /translation="MSTDRWGLAHIRARSTRDAFFVQGFNAARDRLWQIDLWRKRGLG
                     LLAADFGPGYLMQDRAARLFLYRGDMAPEWAAYGDDAERICTAFAQGINAAVDLVDDG
                     TLPLPPEFERLGTRPAYWAPEDVVRIRTHCLMRNAASELARMQVHGLADPATDLLRVP
                     LSPSVPREEWDKADDAALPADALAVYELATAPVTFSEDRLNAPLQDAPLWSSVDARRA
                     VRRAPSMEGSNNWAIAPARTDTGRAIMASDPHRLHAAPSLRYMVHLSAPDLDLIGAGE
                     PSSPGIMAGHNGSAAFSLTIFCADQEDVMIYRTDDAGTAYRYGEGTEKMSRVDEIFAV
                     KGCADQTLPLLFTRHGPVVFNEGGTAVAIRTVFTDPGTAPYMASLKSMRATTMPAFRE
                     ALTTWGAPSVNMIYADCAGDICWQPAAYVPRRTGWRGLMPVSGDGAHEWQGYMTAADL
                     PAVENPVSGFVHSANEMNLPASWDHDAHPIGFEWFEDGRADRIAEVISADRARDIAGN
                     CALQTDTFSAIAMALIALLPDGPAADLLRGWDGHATADSAAALLYEIWLSRHLRPAML
                     EKFAPDPELRKYLAPGNIPTLARMLQDDPGHGQILSDTLAAAWDDTRSIFGRDVTQWR
                     WGDLHNGYFDHALTPLGATHDVGPLATGGSSTTVMMGHYEASDFRVSNGASVRMVLDV
                     GQWDNSVWINAPGQSGVPGQSHYDDLAPLWAAGNYVPMPYSRDAVDAATQECIGLMPQ
                     DQ"
BASE COUNT          445 a          813 c          883 g          440 t
ORIGIN      
        1 aaacagggcg acgtgatcat cacgggcgcc cgcatcgggc ccgttccatt ggccggagca
       61 tcgcgggcac gcgccgttgc gctgggcgct tcggtaagtc ttggttgacg aggtcagcag
      121 ggacaaggcc agcggaaagt ccggctgcgc catccggtcg cttctcgcga tgcaaatgac
      181 gattcggcgc ctgcgatagg ggattccacg taaaaaatat tcataaatca attattttaa
      241 tggtttggga gaaggaaggc cgcttcatcc cacgccctgt ccgccgcgcg ccctcggtct
      301 gttccgatga aacgggccgg gaacggtcgc gccgccgacc gctattggtc ctgcggcatg
      361 aggccgatgc attcctgcgt cgcggcgtcc accgcgtcgc gggaatacgg catggggaca
      421 tagttcccgg cggcccagag cggggccagg tcgtcgtagt ggctctggcc cggcacgccg
      481 gattgccccg gtgcgttgat ccagacgctg ttgtcccatt gtcccacatc cagaaccata
      541 cgcaccgacg caccattgct gacccggaaa tcggatgcct cgtagtgacc catcatgacg
      601 gttgtgctgc tgccgccggt ggcgagtggg ccgacatcat gtgtggcgcc caggggtgtc
      661 agcgcgtggt cgaaatagcc gttgtgcaag tcgccccaac gccattgtgt cacatccctg
      721 ccaaagattg accgcgtgtc gtcccatgcc gcagcaagag tatccgaaag gatctggcca
      781 tgcccgggat cgtcttgcag catccgcgca agcgtgggga tattgccggg cgccagatat
      841 ttgcgcagtt ccggatcggg ggcgaacttt tccagcatcg cgggacgaag atggcgggaa
      901 agccagatct cgtagagcag ggcagcggca ctgtccgccg tcgcgtggcc gtcccagcca
      961 cgcagaagat cggcagccgg gccgtcgggc agcagcgcga tcagcgccat cgcgatggcc
     1021 gagaaagtgt cggtctgcaa tgcgcaattg cccgcgatgt cccgtgcgcg gtccgcagag
     1081 atcacctcgg cgatacgatc cgcgcggccg tcctcgaacc actcgaagcc gatcggatgc
     1141 gcgtcatggt cccaactcgc cggcaggttc atctcattgg cggaatggac gaagccgctg
     1201 acaggattct cgactgcggg aagatcggcg gcggtcatgt agccctgcca ttcatgcgcg
     1261 ccatcgccgg aaacgggcat caagccacgc cagccggtgc gccttggcac ataggcggcg
     1321 ggctgccagc agatgtcgcc cgcacaatcg gcatagatca tgttgaccga cggcgcaccc
     1381 caggtggtca gcgcctcgcg gaaggccggc atcgtcgtcg cacgcatgga tttgaggctt
     1441 gccatgtagg gcgcggtgcc gggatcggtg aacaccgtcc ggatggcgac ggcggtgccg
     1501 ccctcgttga agacgaccgg cccgtgccgg gtgaaaagaa gtggcagcgt ctggtccgca
     1561 cagcccttga ccgcgaagat ttcgtcgacg cgtgacatct tctcggtccc ttcgccgtat
     1621 cggtaggcgg ttcccgcatc gtcggtccgg tatatcatca catcctcctg gtcggcgcag
     1681 aagatcgtga ggctgaaggc ggcgctgccg ttgtggccgg ccatgatgcc cggggatgag
     1741 ggttcgcccg ccccgatgag gtcgaggtcc ggcgcgctca gatgcaccat gtagcgcagc
     1801 gacggcgcgg catgaagtct gtgcggatcg cttgccatga tggcgcggcc cgtatcggtc
     1861 cgcgcggggg cgatggccca gttgttcgat ccctccattg acggtgcgcg cctgacggcc
     1921 ctgcgagcat cgacggagga ccacaggggc gcgtcctgca gcggggcgtt caagcggtct
     1981 tcgctgaacg tgacgggggc ggtggccagt tcatagacgg caagcgcatc ggcgggcagg
     2041 gccgcgtcat cggccttgtc ccattcctcc cggggcacgg acggggacag tggcacacgc
     2101 agaaggtcgg tcgcggggtc ggccagtccg tgcacctgca tccgcgccag ttccgacgcg
     2161 gcgttgcgca tgaggcaatg ggtgcggatg cgcaccacat cctcgggcgc ccaataggcg
     2221 ggcctggtgc cgaggcgttc gaactcgggc ggaaggggca gggtgccgtc gtccaccaga
     2281 tcgacggcag cattgatgcc ttgcgcgaag gcggtgcaaa tccgttccgc gtcatcgcca
     2341 tatgcggccc attccggcgc catgtcgccg cgatacagga acaggcgcgc cgcccggtcc
     2401 tgcatcagat agccggggcc aaagtcggcg gccagcagac ccagcccgcg cttgcgccac
     2461 aggtctatct gccacaagcg gtcccgcgcg gcattgaagc cctgcacgaa gaaggcgtcg
     2521 cgcgtgcttc gcgcgcggat atgcgccagg ccccagcggt cggtggagat gctggcaggg
     2581 g
//
LOCUS       DTVW01000718            1180 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1878100, whole
            genome shotgun sequence.
ACCESSION   DTVW01000718 DTVW01000000
VERSION     DTVW01000718.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1180)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1180)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1180
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1878100"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            23..598
                     /locus_tag="EYO87_09470"
                     /pseudo
     CDS             23..598
                     /locus_tag="EYO87_09470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008279232.1"
                     /note="functions in MreBCD complex in some organisms;
                     incomplete; partial in the middle of a contig; missing
                     N-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein"
     gene            634..993
                     /locus_tag="EYO87_09475"
                     /pseudo
     CDS             634..993
                     /locus_tag="EYO87_09475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010394870.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreC"
BASE COUNT          219 a          384 c          384 g          193 t
ORIGIN      
        1 aaaggcgacg gccatgtagc gcaccggcag catggtcgtc gatatcggcg gcggcacgac
       61 cgaggtcgcg gtgctgtcgc tgggcgatgt ggtctatgcg cgttctgtcc gcatcggcgg
      121 cgaccgcatg gacgaggcga tcatcaacta tctgcgccgc aaccagaaca tgttgatcgg
      181 cgacagcacg gccgagcgcg tgaagaccag catcggcacc gcgcggatgc ccgatgacgg
      241 acgcggcgcc acgatcatgg tgcgcggacg cgatctgctg aacggtatcc ccaaggaaat
      301 cgagatcagc caggccatgg tcgccgaggc gctgaccgaa ccgatgcagg cgatctgcga
      361 ggcggtgatg gtcgcgctgg aggcgacgcc gcccgacctg gccgccgata tcgtcgatcg
      421 cggcgtgatc ctgaccggtg gcggcgccat gctgggcgat ctggatctgg ccctgcgcga
      481 acagaccggc ctttcgatca ccctggccga tcagccgatg agttgcgtcg cgcttggcac
      541 cggcaaggcg ctggaattcg aaaagcagtt gcgccacgtc atcgactacg aaagctgacg
      601 cagcgcggcg gtatcgcgaa ggcgcgtttc cgaatggcac gaaagggacc cgatttcgtc
      661 accccgatcc ggcgcgtcct gatcgcgctg atgacgattg tcctgatcgg tctgttcctt
      721 ttctggcgca tcgacagccc ccgggccgaa cggatgcggg tcgcgctgat cgaccgtttc
      781 gtgcccggtt tcgaatgggc cttcgcgccc gtgaccaagg tcagccagat gatcgcgggc
      841 ttccagtcct atgcccgcat ctacgagcag aatcaggaac tgcgccgcga gttgcagaag
      901 atgcaggcct ggaaagaggc cgccgtccag ctggaacagg aaaattccaa gctgctggcg
      961 cagaacaacg tccgactgga cccggcgctg accggccacg cccatccact accgggcacc
     1021 aacacacccg tccgtccaga ggatttcccc acctacgggg cactcgcggc ggatctccgg
     1081 tgttgccgcc gtcaccggca cgtcctgcaa cagctcgcga gggctgcggc cttccgccgc
     1141 cacaatctcg agtagtcgca gcgtcgcata gatggcgtcg
//
LOCUS       DTVW01000719            1603 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1879166, whole
            genome shotgun sequence.
ACCESSION   DTVW01000719 DTVW01000000
VERSION     DTVW01000719.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1603)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1603)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1603
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1879166"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..574)
                     /locus_tag="EYO87_09480"
     CDS             complement(<1..574)
                     /locus_tag="EYO87_09480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011749097.1"
                     /note="in Caulobacter crescentus, CC3477 is differentially
                     expressed in minimal salts media with glucose as compared
                     to complex media; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HIC66208.1"
                     /translation="MSSANLAQSIGRELPYLRRYARALTGSQTAGDNYAAATLEAILT
                     DRSVLQDEDDTRLGLFRTFHAIWQSSGQPVAEADSVRERRAQDHLRRLTPNSREALLL
                     RTIEELRYDQIARVMQVDQREAEELVQIALNEMGQAISGKVMVIEDEMIIAMDLKGIV
                     QAMGHEVTGVARTHTQAVDLAGKARPDLILA"
     gene            668..814
                     /locus_tag="EYO87_09485"
     CDS             668..814
                     /locus_tag="EYO87_09485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HIC66209.1"
                     /translation="MTPKRDERQKAAFEKQIDENLRRVYEQDANEQVPDRFLDLLKQL
                     REQE"
     gene            852..1418
                     /locus_tag="EYO87_09490"
     CDS             852..1418
                     /locus_tag="EYO87_09490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012187228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HIC66210.1"
                     /translation="MTKTPQTDPRDELVDHLPALRAFALSLTREGASADDLVQDTIVK
                     AWTNMDKFQAGTNLRAWLFTILRNTFYSARRKTKREVSDTDGIHAARQATRPDHDGRL
                     ALKDFRAAFEQLPDEQREALILVGASGFSYEEAAGMTGVAIGTVKSRANRGRRKLAEL
                     LHLEHGEELDMTDQATLAVMSANQGITR"
BASE COUNT          311 a          517 c          493 g          282 t
ORIGIN      
        1 cggccaggat caggtcgggg cgcgccttgc cggccagatc gacggcctgg gtatgggtgc
       61 gggcgacgcc cgtcacctca tgacccatcg cctgaacgat gcctttcagg tccatggcga
      121 tgatcatctc atcctcgatc accatgacct tgccgctgat tgcctgaccc atttcgttca
      181 gcgcgatctg gaccagttcc tcggcctcgc gctgatcgac ctgcatcacg cgggcgatct
      241 ggtcatagcg caattcctcg atcgtgcgca gcaacagcgc ctcgcgcgaa ttcggcgtca
      301 ggcggcgcag atgatcctgg gcgcgtcttt cgcggaccga atcggcctcg gcgacgggct
      361 ggcccgaact ctgccagatg gcatggaagg tgcggaacag gccgaggcgg gtatcatcct
      421 cgtcctgcaa caccgaccga tcggtcagga tcgcttccag ggtggctgcg gcataattgt
      481 ccccggcggt ctggcttccg gtcagcgcgc gcgcatagcg gcgcagatag ggaagctcgc
      541 gtccgatcga ttgggcgaga ttggctgacg acattttcct gtccttgaat ttcgcatgtt
      601 gcggaacctt ccctaacccc tacaggttgg ctagggtgcg cacaagattt ccgggactaa
      661 caaaaacatg acaccgaaac gagatgagcg gcaaaaggcc gccttcgaaa aacagatcga
      721 cgagaacctg aggcgggtct acgagcagga tgccaacgaa caggttcccg atcggttcct
      781 cgaccttctc aagcaactgc gcgagcagga atgacaattc ccgcaagcat tctgccgcga
      841 aggcgcaccc catgacgaaa accccgcaga ccgatccccg cgacgagctg gtcgatcacc
      901 ttccggcgct gcgcgccttt gccctgtcgc tgacacgcga gggggcttcc gccgacgacc
      961 tggtgcagga cacgatcgtc aaggcatgga ccaacatgga caagttccag gccggcacca
     1021 atctgcgtgc ctggctgttc accatcctgc gcaacacctt ctattcggcc cgccgcaaga
     1081 caaagcgcga ggtcagcgac accgacggca tccatgccgc ccgccaggcc acgaggcccg
     1141 atcatgacgg acggcttgcg ctgaaggatt tccgcgccgc tttcgagcaa ctgccggatg
     1201 aacagcgcga ggcgttgatc cttgtcggcg catcgggttt ttcctacgag gaagcggccg
     1261 gcatgaccgg cgtcgccatc ggcaccgtca agtcgcgcgc caatcgtggc cgccgcaagc
     1321 tggcggagtt gctgcatctc gaacacgggg aagaactgga catgaccgat caggcaacgc
     1381 tggcggtgat gtctgccaat cagggcatca cccgctgagg aaagggcgcg cgatgctgag
     1441 acggcttcgc gacaggctgg aattcacccg cgggctgggc ttccggcttg gcacccttct
     1501 gtcggtggcg atcctgccgc tggggctgat ttcgctgatc cagaacctca acctggcgcg
     1561 cgaagccgaa cgcagcgccg agatcgcgct gatgggccgc acc
//
LOCUS       DTVW01000720            2264 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1879171, whole
            genome shotgun sequence.
ACCESSION   DTVW01000720 DTVW01000000
VERSION     DTVW01000720.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2264)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2264)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2264
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1879171"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1932
                     /locus_tag="EYO87_09495"
     CDS             <1..1932
                     /locus_tag="EYO87_09495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HIC66211.1"
                     /translation="QTGTGKTASFTLPMITLLGRGRARARMPRSLVLCPTRELAAQVA
                     ENFDTYAKHTKLTKALLIGGVSFAEQDKLIDRGVDVLIATPGRLLDHHERGKLLLTGV
                     QIMVVDEADRMLDMGFIPDIERIFQLTPFTRQTLFFSATMAPEIERITNTFLHAPERI
                     EVARQATASETITQKLIQFTPTRKDQAAKQKRELLRALIDAEGLATETGGLKNAIIFC
                     NRKTDVDIVAKSLAKYGYDAAPIHGDLEQSHRTRTLDSFRDGSLKLLVASDVAARGLD
                     IPAVSHVFNFDLPSHAEDYIHRIGRTGRAGRQGTAISLATPSDEKYLSAIESLVKQSL
                     PRAEAPTGFSLTDAAPSSSRRDGDDRGRGGRGRSRSRRGGEDRPREDSPRVDQPEKTR
                     APEAETAPQQPERREQPGQQDRRDDRRGGRRGRGEDRGQPVQGMGDHVPDFMLVPIRS
                     ALDSATRDEPPATSDDDAGKPQEQPRPKRSRRRKSSTAEAETATGPASPEQPEESAPP
                     TEAMVETPAETPAAAEAPAEAQAETPDDKPRKTRRKAAAAKSETAEAAADAPKPRRSR
                     AKTAKKDSAAEDDTGAADSDAAAKPARSRRKKADPAAEAEAEPAKPGAEETPMPKPRR
                     PRRKKADAPATGDNADADA"
     gene            2026..>2264
                     /locus_tag="EYO87_09500"
     CDS             2026..>2264
                     /locus_tag="EYO87_09500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="apolipoprotein N-acyltransferase"
                     /protein_id="HIC66212.1"
                     /translation="MIASLGLAPFDVWGLAPVAFAILIWRACRANPQAAFWHLLAAGL
                     GWFGLGMSWIVEPFLVEPEIYGWMAPFALILMALGG"
BASE COUNT          414 a          818 c          755 g          277 t
ORIGIN      
        1 cagaccggca ccggcaagac tgccagcttc accctgccga tgatcacgct gctgggtcgt
       61 ggtcgggccc gcgcgcggat gccgcggtcg ttggtcttgt gcccgacgcg cgaactggcc
      121 gcgcaggtgg ccgaaaattt cgatacctat gccaagcaca ccaagctgac caaggccttg
      181 ctgatcggcg gcgtcagctt tgccgaacag gacaagctga tcgatcgcgg cgtcgatgtg
      241 ctgatcgcca cgccgggccg cctgctggac catcacgaac gcggcaagct gctgttgacc
      301 ggcgtgcaga tcatggtcgt ggacgaggct gaccggatgc tggacatggg cttcatcccc
      361 gatatcgaac gcatcttcca actgaccccc ttcacccgcc agacgctgtt cttcagcgcc
      421 acgatggcgc ccgagatcga acggatcacc aacaccttcc tgcacgcccc cgaacggatc
      481 gaggttgccc gccaggccac cgccagcgaa accatcaccc agaagctgat ccagttcacg
      541 cccacccgca aggatcaggc cgccaagcag aagcgcgaat tgctgcgcgc cctgatcgat
      601 gccgagggtc tcgcgaccga aaccggcggg ctgaagaacg cgatcatctt ctgcaaccgc
      661 aagaccgatg tggacatcgt cgccaagtcg ctggccaaat acggctatga tgccgccccg
      721 atccacggcg atctggaaca gagccaccgc acccggaccc tggacagttt ccgcgacggc
      781 agcctgaaac tgctggtcgc ctcggacgtg gcggcacgcg ggctggacat tccggcggtc
      841 agccatgtgt tcaatttcga tctgcccagc catgccgagg attatatcca tcgcatcggc
      901 cgcaccggcc gggcgggccg tcagggcacc gccatcagcc tcgccacgcc ctcggacgag
      961 aaatatcttt cggccatcga aagcctggta aagcaaagcc tgccgcgcgc cgaggcgcca
     1021 acgggatttt cgctgacgga cgcggcgcca tcctcgtctc gcagggatgg cgacgaccgc
     1081 ggtcgcgggg ggcgcggccg aagccgcagc cgtcgcggcg gcgaggatcg cccgcgcgag
     1141 gacagcccgc gcgtcgatca acccgagaag acgcgcgcgc cagaggccga aaccgcaccg
     1201 cagcagcccg aacgccgcga acagcccggc cagcaggacc ggcgcgacga ccggcgcgga
     1261 ggacgcaggg gccgcggcga ggatcgcggc cagccggtgc agggcatggg cgatcacgtt
     1321 ccggacttca tgctggtgcc gatccggtcg gcgctggaca gcgccacccg tgacgagccc
     1381 ccggcaacca gcgacgacga tgccgggaaa ccgcaggaac agccccggcc aaagcgcagc
     1441 cggcgccgca aatcctcgac cgccgaggcc gagacggcga ccgggcccgc gtcgcccgag
     1501 cagccggagg aatcggcgcc gccgacggag gccatggtcg aaacgccggc cgagacaccc
     1561 gcggcggccg aagcccccgc cgaggcacag gcagaaacgc cggacgacaa gccgaggaaa
     1621 acccgtcgca aggctgcggc cgccaagtcc gagaccgccg aggcggcggc ggacgcgcca
     1681 aaaccgcgcc gcagccgcgc caagaccgca aagaaggaca gcgcggccga ggacgatacc
     1741 ggcgccgcgg acagcgacgc ggccgcgaaa ccggcgcgca gccgccgcaa gaaggccgac
     1801 cctgccgcag aggccgaggc cgagccggcc aagcccgggg ccgaggagac gcccatgccc
     1861 aagcccaggc ggccccgccg caagaaggcc gatgcccccg caaccgggga caatgccgac
     1921 gctgacgcct gagcctcgac gatgcgcgac cgcctgaccc cgccgcgcct gcgctctggc
     1981 cggcgaccgc cgctgcgcca gcttctgccc gatctggcgc ttggcatgat cgcgtcgctg
     2041 ggccttgcgc ccttcgatgt ctgggggctg gctccggtgg ccttcgcgat cctgatctgg
     2101 cgcgcctgcc gcgccaaccc gcaggccgcg ttctggcatc tgctggcggc ggggctgggc
     2161 tggttcggcc tgggcatgag ctggatcgtc gagcctttcc tggtcgaacc cgagatctat
     2221 ggctggatgg cgcctttcgc gctgatcctg atggcgcttg gcgg
//
LOCUS       DTVW01000721            1072 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1881369, whole
            genome shotgun sequence.
ACCESSION   DTVW01000721 DTVW01000000
VERSION     DTVW01000721.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1072)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1072)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1072
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1881369"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..447
                     /locus_tag="EYO87_09505"
     CDS             <1..447
                     /locus_tag="EYO87_09505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009803487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylcrotonoyl-CoA carboxylase"
                     /protein_id="HIC66213.1"
                     /translation="RGIAKDGAKMLMAQGGSVVPKFTVIANASYGAGNYGMCGRAWDA
                     RTLFMWPQAEIGVMGADQAANTMADVKIRQLQREGKELTEEEIAAILEPVLEKYKRDV
                     EAYTSTSELWDDGILDPADTRNALGISISASLNAPIDDPHYGIFRL"
     gene            complement(562..>1072)
                     /locus_tag="EYO87_09510"
     CDS             complement(562..>1072)
                     /locus_tag="EYO87_09510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009803486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transferase hexapeptide repeat family protein"
                     /protein_id="HIC66214.1"
                     /translation="GCYIGPGASLRGDFGRIVIGDGANVQDNCIIHSFPGRDAVVETD
                     GHIGHGAILHGCTIGRNALVGMNAVIMDGVDLGAESIVGAQAFLRGETVIPPRSMVVG
                     SPAKVIREVSEKEVAWKTRGTAEYQQLARDCLAGLMPVEPLKTVEADRPGMVASDVVS
                     IQEARRTSS"
BASE COUNT          210 a          338 c          324 g          200 t
ORIGIN      
        1 cgcggcatcg ccaaggacgg cgccaagatg ctgatggcgc agggcggctc ggtcgtgccg
       61 aagttcacag tgatcgccaa tgcctcttac ggggccggta attacggcat gtgtgggcgg
      121 gcctgggatg cgcgcacgct gttcatgtgg ccccaggccg aaatcggcgt gatgggcgcg
      181 gatcaggccg ccaacaccat ggcggacgtc aagatccggc agcttcagcg tgaaggcaaa
      241 gagctgaccg aagaggaaat cgccgccatc ctagagcctg tgctggaaaa gtacaaaagg
      301 gatgtcgagg cctatacctc gacctcggaa ttgtgggacg atggcattct tgacccggca
      361 gacactcgca acgcgcttgg aatatctata tccgcctcgc taaatgcacc gatcgacgat
      421 ccgcactacg ggatcttccg tctgtaacgg cttgaggggc tcgggcgata caccgggaaa
      481 cggtcgtgtc gcccgttttc agataggtcc tgccgcttcg ggccgcttct taaacccgcc
      541 ccggtccggt gcctggagag gtcaggacga tgtccgccgc gcctcctgaa tggagacgac
      601 gtcagaggcc accatcccgg gccggtctgc ctcgaccgtc ttcagcggct cgaccggcat
      661 caatccggcc agacagtcgc gcgcaagttg ctggtattcc gcggtgccgc gtgttttcca
      721 cgcgacttct ttctcgctga cctcccggat cacctttgcc ggcgaaccga ccaccatcga
      781 acggggcgga atcacagttt cgccgcgcaa aaacgcctgc gcgccgacaa tcgattccgc
      841 gccaagatct acaccatcca ttatgacggc attcatcccg accagagcgt tccggccaat
      901 tgtgcagccg tgcaggatcg cgccatggcc gatgtgaccg tcggtttcca cgacggcgtc
      961 gcggccggga aaggaatgga tgatgcagtt atcctgtaca ttggcgccgt caccgatcac
     1021 gattctgccg aaatcgcccc gcaggcttgc gccgggtccg atgtagcatc ca
//
LOCUS       DTVW01000722            2694 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1883681, whole
            genome shotgun sequence.
ACCESSION   DTVW01000722 DTVW01000000
VERSION     DTVW01000722.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2694)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2694)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2694
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1883681"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..960)
                     /gene="nrdF"
                     /locus_tag="EYO87_09515"
     CDS             complement(<1..960)
                     /gene="nrdF"
                     /locus_tag="EYO87_09515"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010138312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 1b ribonucleoside-diphosphate reductase
                     subunit beta"
                     /protein_id="HIC66215.1"
                     /translation="MKDQTITPVQRAVNWNRLQDDKDLEVWNRLTMNFWLPEKVPLSN
                     DVQGWATLRPEERQLTIRVFTGLTLLDTVQNSIGAPAMMADAITPHEEAVLSNIAFME
                     AVHARSYSSIFSTLCSTREVDEAFRWSEDNPQLQRKARLVLDEYAAGSDPLRRKIASV
                     FLESFLFYSGFYLPMYWSSRAKLTNTADLIRLIIRDEAVHGYYIGYKYQRGLERLGQG
                     ERAALKDFAFSLMFDLYDIEAKYTADLYDGIGLTEDVKAFLHYNANKALQNLGYEALF
                     PPAACEVNPAIMAALSPDSENHDFFSGSGSSYVIGKAIATEDED"
     gene            complement(1014..>2694)
                     /gene="nrdE"
                     /locus_tag="EYO87_09520"
     CDS             complement(1014..>2694)
                     /gene="nrdE"
                     /locus_tag="EYO87_09520"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011750603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="class 1b ribonucleoside-diphosphate reductase
                     subunit alpha"
                     /protein_id="HIC66216.1"
                     /translation="SGRFQPATPTFLNAGKASRGELISCFLLRVEDNMESIGRAINSS
                     LQLSKRGGGVALMLTNIRESGAPIKGIENQSSGIIPVMKLLEDSFSYANQLGARQGAG
                     AVYLNAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFDLAKRNEDMYLFSPHD
                     IQRVYGVPFSDIPVTQKYTEMVDDRRIRKTKINAREFFQTLAEIQFESGYPYIMFEDS
                     VNRANPIHGRITMSNLCSEILQVNEASQFNEDLSYAHLGTDISCNLGSLNIAKTMDGP
                     DFGGTVEAAIRALTAVSEMSAIDAVPSIRRGNDEAHAVGLGQMNLHGYLAREHIHYGS
                     PEGIEFTSVYFAAIAYHAIRASNLLAREKAATFRDFDKSSYADGSFFDKYTGRDWLPV
                     LPEVTRLFADITLPTRADWAALKARVMEHGLYNRNLQAVPPTGSISYINNATSSIHPI
                     VSKIEIRKEGKIGRVYYPAAYMSNENLDFYRDAYEIGPMAIIDTYAAATEHVDQGLSL
                     TLFFPAEATTRDINRAQIHAWKKGIKTIYYIRLRQAALEGTEVEGCVSCTL"
BASE COUNT          492 a          796 c          855 g          551 t
ORIGIN      
        1 gtcctcgtcc tcggtggcga tggccttgcc gatcacatag gacgatcccg accccgaaaa
       61 gaaatcgtgg ttctcgctgt cgggcgacag ggcggccatg atggccgggt tgacctcgca
      121 ggcggcgggc ggaaacagcg cctcgtagcc cagattctgc agggccttgt tggcgttgta
      181 gtgcaaaaac gccttcacgt cctcggtcag cccgattccg tcatagagat cggcggtata
      241 tttcgcctcg atatcgtaga gatcgaacat cagcgagaag gcaaagtcct tcagcgccgc
      301 gcgttcgccc tggccaagcc gttccagccc gcgctgatac ttgtagccga tataatagcc
      361 atgcacggcc tcgtcgcgga tgatcaggcg gatcaggtcg gcggtattgg tcagcttggc
      421 gcggctggac cagtacatcg gcagatagaa gccggaatag aacaggaaac tttccagaaa
      481 cacgctggcg atcttgcgcc gcagcggatc cgagccggcc gcgtattcat ccagcaccaa
      541 ccgcgccttg cgctgaagct ggggattgtc ttcggaccag cggaaggctt cgtccacctc
      601 cctggtcgaa cacagggtcg agaagatcga ggaataggac cgcgcgtgaa ccgcctccat
      661 gaaggcgatg ttggacagga ccgcctcttc gtgcggggtg atcgcatcgg ccatcatcgc
      721 gggggcgccg atgctgttct gcaccgtgtc cagcagggtc agcccggtga agacgcggat
      781 ggtcagttgc cgttcctcgg gacgcagcgt ggcccagcct tgcacatcgt tggacagcgg
      841 caccttttcg ggcagccaga aattcatcgt cagccggttc cagacctcca gatccttgtc
      901 gtcctgaagc cggttccagt tcaccgcgcg ctgcaccggc gtgatcgtct gatccttcat
      961 ggcgaaagac cctttcctgg tttgttcgtc ggatatccgc gggacagcgc ggcctagagg
     1021 gtgcaggaca cgcatccctc gacctcggtt ccttccagcg cggcctgccg cagcctgatg
     1081 tagtagatcg tcttgatccc cttcttccag gcgtggatct gggcgcggtt gatgtcgcgc
     1141 gtcgtcgcct cggcggggaa gaacagggtc agcgacaggc cctgatcgac atgttcggtc
     1201 gccgccgcat aggtgtcgat gatcgccatg ggtccgattt cataggcgtc gcgatagaag
     1261 tcgagattct cgttcgacat gtaggcggcc gggtaataga cgcggccgat cttgccttcc
     1321 ttgcggatct cgatcttcga gacgatcgga tggatcgatg aggtggcgtt gttgatatag
     1381 ctgatcgagc cggtgggcgg aactgcctga agattgcggt tatagagccc gtgttccatc
     1441 acccgggcct tcagcgccgc ccaatccgca cgcgtgggca gggtgatgtc ggcgaatagc
     1501 cgcgtcacct cgggcaggac gggcagccag tcgcggccgg tatatttgtc gaagaacgac
     1561 ccgtcggcat agctggactt gtcgaaatcg cggaacgtgg cagccttttc ccgcgccagc
     1621 aggttcgagg cccggatcgc gtgataggca atcgcggcga aatagacact ggtgaactcg
     1681 atcccttcgg gactgccata gtggatatgc tcgcgcgcca gatacccgtg caggttcatc
     1741 tggcccaaac cgacggcatg ggcctcgtca ttgccgcgcc ggatcgaggg cacggcgtcg
     1801 atggccgaca tctcgctgac cgcggtcagc gcgcggattg cggcctcgac ggtgccgccg
     1861 aaatcggggc cgtccatcgt tttggcgata ttcaggctgc ccaggttgca ggaaatgtcg
     1921 gttcccagat gcgcgtagga cagatcctcg ttgaactgcg acgcctcgtt cacctgcagg
     1981 atctcgctgc acagattgga catggtgatg cgcccgtgga tggggttggc gcggttcacg
     2041 ctgtcctcga acatgatata gggatagccg ctctcgaact ggatctcggc cagcgtctga
     2101 aagaattcgc gggcgttgat ctttgtcttt cggatgcgcc tgtcgtccac catctcggta
     2161 tatttctgcg tcaccggaat gtccgagaag ggcacgccat agacccgctg gatgtcgtgg
     2221 ggagagaaca gatacatatc ctcgttgcgc ttggccagat cgaatgtgat gtcggggatc
     2281 accacgccca gggacagcgt cttgatgcgg atcttctcat ccgcattttc gcgtttggtg
     2341 tccaggaagc gcaggatgtc ggggtgatgc gcgttcagat agaccgcgcc cgcgccctgc
     2401 cgcgcgccaa gctggttggc atagctgaaa ctgtcctcca gcagcttcat caccggaatg
     2461 atgcccgagg actggttctc gatgcccttg atcggcgcgc cggattcgcg gatattggtc
     2521 agcatcagcg ccacgccgcc gccgcgcttg ctgagttgca gcgaggaatt gatcgcgcgg
     2581 ccgatggatt ccatgttgtc ctcgacccgc agcagaaaac acgagatcag ctcgccccgc
     2641 gacgccttgc cggcgttcag gaaagtcggc gtggcgggct ggaaccggcc cgac
//
LOCUS       DTVW01000723            2188 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1884662, whole
            genome shotgun sequence.
ACCESSION   DTVW01000723 DTVW01000000
VERSION     DTVW01000723.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2188)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2188)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2188
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1884662"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..133
                     /locus_tag="EYO87_09525"
     CDS             <1..133
                     /locus_tag="EYO87_09525"
                     /EC_number="1.7.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_421453.1"
                     /note="NADPH-dependent; catalyzes the reduction of
                     7-cyano-7-deazaguanine to 7-aminomethyl-7-deazaguanine in
                     queuosine biosynthesis; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="NADPH-dependent 7-cyano-7-deazaguanine reductase
                     QueF"
                     /protein_id="HIC66217.1"
                     /translation="WLRIGGYWYPRGGMPIDVFWQTGAAPAGLWLPDQGVAPYRGRG"
     gene            complement(137..622)
                     /locus_tag="EYO87_09530"
     CDS             complement(137..622)
                     /locus_tag="EYO87_09530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008030780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HIC66218.1"
                     /translation="MFPSAPDRASTPEKPQTTDRLAASLFAEVLIAEQLSRNLISKAL
                     PRGMQISHFSVLNLLAHVNEERSPAQLAEAFHVTRGAMTNTLSRLEWAGHVHIRPDWD
                     DARRKFVSISKAGRDARDSAIAAFMPLIAGVVRDIGADKVRGALPVLRELRIRLEGGP
                     D"
     gene            complement(626..1483)
                     /locus_tag="EYO87_09535"
     CDS             complement(626..1483)
                     /locus_tag="EYO87_09535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase family protein"
                     /protein_id="HIC66219.1"
                     /translation="MNQARVLSAGLVQLNVGDDPAGNLSPTLLLIRQAASQGAEIVLT
                     PEVTNMLSPDRARQQAMLQREDDDPTLAALREAAGAARIWLLIGSLALKTGDADGRFA
                     NRSFLIDPTGRIAARYDKLHMFDVTISRTEHFRESAAYRPGDRAVLADLNGIGLGLTI
                     CYDLRFPHLYRDLAKAGARILTVPSAFSPTTGAAHWETLLRARAIETGCFVLAPAQCG
                     THPAPHSPDRQPRRSHGHSLAVDPWGKVIADAGSEPGVTIVRLDLGAVDRARSRIPSL
                     DHDRPYSGP"
     gene            complement(1480..1752)
                     /gene="grxC"
                     /locus_tag="EYO87_09540"
     CDS             complement(1480..1752)
                     /gene="grxC"
                     /locus_tag="EYO87_09540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012334927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin 3"
                     /protein_id="HIC66220.1"
                     /translation="MSQPRITIYTTATCPFCIRAKDLLTRKGADFDEIDVGVRPDQRA
                     AMIQRANGRRTVPQIFIGDTHVGGCDDLFALDRAGKLEALLAGRAA"
     gene            complement(1786..>2188)
                     /locus_tag="EYO87_09545"
     CDS             complement(1786..>2188)
                     /locus_tag="EYO87_09545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ComF family protein"
                     /protein_id="HIC66221.1"
                     /translation="LSRAAAPLIRPGMVVAPVPLHLRRLMKRRYNQAGLMSAPLARSR
                     GLDHLPDLLLRNRHTEGQDHRGVSDRFANIAGAITVNRRRAARIEGRAVLLVDDVMTS
                     GATLAAAAEALLAAGSGPVSVAVLARAVKDD"
BASE COUNT          337 a          732 c          784 g          335 t
ORIGIN      
        1 atggctgcgg atcggcggct actggtatcc gcgcggcgga atgccgatcg acgtgttctg
       61 gcagaccggc gccgcgccgg cgggcctgtg gctgcccgat cagggcgtcg cgccctatcg
      121 cggccggggc tgaaccctag tccggcccgc cctccagccg gatacgcaat tcccgcagga
      181 cgggcagggc gccacggacc ttgtcggcgc cgatgtcgcg gacgacgccg gcgatcagcg
      241 gcatgaaggc cgcgatcgcc gaatcgcgcg cgtcccgtcc ggccttgctg atggacacga
      301 acttgcgccg cgcatcgtcc cagtcggggc ggatatggac atgcccggcc cattccagcc
      361 gcgacagcgt gttggtcatc gcgcctctcg tgacgtggaa cgcctcggcc agttgcgcgg
      421 ggcttcgttc ctcgttcacg tgagccagaa ggttcaagac cgagaaatgc gagatctgca
      481 tcccgcgcgg cagcgccttg ctgatcagat tgcgcgacaa ttgctcggca atcagcacct
      541 cggcgaacag gctggccgcc agacggtcgg tcgtctgcgg cttctcgggc gtgctggcgc
      601 ggtccggtgc ggagggaaac atctgtcagg gcccggaata gggacggtca tggtcaagcg
      661 aggggatgcg ggaccgtgcc ctgtcaaccg ctccaaggtc aagccggacg atggtgacac
      721 cgggttcgga tcccgcatcc gcaatgacct tgccccaggg atccacggcc agcgaatgcc
      781 cgtggctgcg gcgcggctgg cggtcggggc tgtggggcgc gggatgggtg ccgcattgcg
      841 ccggggccag cacgaaacag ccggtctcga tggcgcgggc gcgcagcagg gtttcccaat
      901 gcgccgcccc cgtggtcggg ctgaaggccg agggcacggt caggattcgc gcgcccgcct
      961 ttgccagatc gcgatagaga tggggaaagc gaagatcgta gcagatcgtc aggcccagac
     1021 cgatcccgtt cagatcggcc agaaccgcgc ggtcgcccgg ccggtaggcg gcgctttcgc
     1081 ggaaatgttc ggtccgggag atggtcacgt cgaacatgtg cagcttgtca tagcgcgccg
     1141 cgatccggcc cgtcgggtcg atcaggaagc tgcgattggc gaagcggcca tccgcatcgc
     1201 cggtcttcag cgccagcgat ccgatcagca gccagatccg tgcagccccc gccgcctcgc
     1261 gcagtgcggc gagggtcgga tcgtcgtcct cgcgctgcag catggcctgc tgtcgcgcgc
     1321 gatcgggcga cagcatgttc gtgacctcgg gggtcagcac gatctcggcg ccctgcgacg
     1381 cggcctggcg gatcagcaac aatgtcggcg acaggttccc ggccgggtcg tcgccgacat
     1441 tcaactgcac cagaccggcg ctgaggacgc gggcctggtt catgcggcgc ggccggccag
     1501 caacgcctcc agcttgccgg cgcggtccag cgcgaacagg tcgtcgcagc cgccgacatg
     1561 ggtgtcgccg atgaagattt gcggcaccgt gcggcggcca ttggcccgct ggatcatggc
     1621 ggcgcgctga tcgggccgga cacccacgtc gatctcgtcg aaatcggcgc ctttccgggt
     1681 cagcagatcc ttggcgcgga tgcagaaggg acaggtggcg gtggtgtaga tcgtgatccg
     1741 gggctggctc atggaggtcc ttggtttcga gggttcaccc ccaatctagt catccttgac
     1801 cgcgcgcgcc agaaccgcga ccgagaccgg ccccgagccc gccgccagca gcgcctcggc
     1861 cgccgcggcc agcgtcgcgc ccgaggtcat cacgtcatcg accagcagca cagccctgcc
     1921 ctcgatccgc gcggcgcggc ggcgattgac ggtgatcgcg ccggcgatat tggcgaagcg
     1981 gtcgctgacg ccgcggtgat cctggccttc ggtatggcga ttgcgcagca gcaggtcggg
     2041 cagatggtcc agcccgcgcg agcgggccag cggggccgac atcagacccg cctggttgta
     2101 tcgccgtttc atcagccggc gcagatgcag cggcacgggc gcgacgacca tgccgggccg
     2161 gatcagcggc gcggccgccc gcgacagc
//
LOCUS       DTVW01000724            7421 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1887364, whole
            genome shotgun sequence.
ACCESSION   DTVW01000724 DTVW01000000
VERSION     DTVW01000724.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 7421)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7421)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7421
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1887364"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(536..1924)
                     /locus_tag="EYO87_09550"
     CDS             complement(536..1924)
                     /locus_tag="EYO87_09550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006001260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomannomutase"
                     /protein_id="HIC66222.1"
                     /translation="MTDKSNLGKREITCFKAYDVRGELGKNLDADVAYRIGRAFAEAR
                     RAKCVVVGRDSRESSPELAAALIDGLTDGGADVLDLGLAGTEEVYFHTGFQDTDGGIE
                     VTASHNPINYNGMKIVGRGSAPLDPATELPPIVDLATSGRFAAAKKGSVTDFSHARAE
                     YARAMADFVDISALRPMKIVVNAGNGTAGPTFDAIASELERRGAPLTFVRMHHDVDSS
                     FPNGIPNPLLPENQPPTVEKMKQEKADLGVAWDGDFDRCFFFDENGRFIPGEYIVGLL
                     GAAFLEKSPGEKIVHDPRVIMNTRAMIEEAGGEAVVSKTGHAFIKRKMRDVGAIYGGE
                     MSAHHYFRDFYYCDSGMIPWLLMIELLSRKGQTLAELLSERMRLYPSSGETNYHIDDP
                     DAAIARLIGRYEDKADSRDDLDGVSLDFGTWRFNLRKSNTEPVVRLNLESDGDAELVR
                     EKQAELAAILKG"
     gene            2066..2467
                     /locus_tag="EYO87_09555"
     CDS             2066..2467
                     /locus_tag="EYO87_09555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isopropylmalate/homocitrate/citramalate
                     synthase"
                     /protein_id="HIC66223.1"
                     /translation="MDAKSLISAYFQAFNDGQTDRMLDLLHEDIEHHVNEGRIRKGKA
                     LFAEFGRHMSRSYRETLTDMVIFANETGDRAAAEFMVNGTYLKTDEGLPEAKGQTYRL
                     PAGSFFSIRDGRIARVTTYYNLADWVQQVSR"
     gene            2464..3048
                     /locus_tag="EYO87_09560"
     CDS             2464..3048
                     /locus_tag="EYO87_09560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005978440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HIC66224.1"
                     /translation="MSVTTRVLTGESLAAALDDVARLRIAVFRDWPYLYDGNADYERD
                     YLRAYRSPGAVVVAAMDGARIVGAATGAPMTDHAEDFATAFADRPEKLSRIFYCAESV
                     LLPAYRGRGIGHAFFDALEAHARDLGHDFSAFCSVIRPADHPARPADYRPLDDFWRKR
                     GYAPLEGVFARFSWKDLGQPRETEKKLQFWMRPL"
     gene            3045..3899
                     /locus_tag="EYO87_09565"
     CDS             3045..3899
                     /locus_tag="EYO87_09565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011907654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HIC66225.1"
                     /translation="MKIAAAAYPIDWLDDFDAYETKLTRWVADAEGADLLVFPEYGAM
                     ELASLGGRSVAGDLEASLHEVARHGDAVAALHERLTAEYDCHILAASGPAFEGGRPTN
                     RAVLYGPGGRIGHQDKQIMTRFERDDWDVAGAPGLRVFDTALGRIGVLICYDSEFPLL
                     ARPLAEAGMELLLVPSCTDTVAGFHRVRIGAMARALECQCVVVHAPTVGDVDWNPAID
                     VNHGRAAIYGPPDGFWPETGIIAEGAMDEPGWVMARIDLSRVARSRADGAVLPFAHWP
                     ESEKSRLV"
     gene            3988..4410
                     /locus_tag="EYO87_09570"
     CDS             3988..4410
                     /locus_tag="EYO87_09570"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011907094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HIC66226.1"
                     /translation="MLYITDKITIEEWELSENFTRSQGPGGQNVNKVETAVELRFEAE
                     RSPNLADPVKRRLQRLAGRRWTQDGAVVILVQETRSQARNREIARDRMADLIRRASVA
                     PKRRIATRPTLGSQRRRLKAKASRGQVKAMRGKVETDE"
     gene            4434..4898
                     /locus_tag="EYO87_09575"
     CDS             4434..4898
                     /locus_tag="EYO87_09575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009507292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HIC66227.1"
                     /translation="MLVGKRPPALQVGALCLRPRDGKVLMITSRGTGRWIIPKGWPMP
                     GHSLAGAAGREAWEEAGAEGRTGHRELGRYIYDKVQDSGFAVPVEVHVFPLHVDRLSD
                     VYPESGQRHREWFAPGRAAQLVAEPGLAAILRGLGAGADPKTDTVLRPRGSR"
     gene            4932..6362
                     /locus_tag="EYO87_09580"
     CDS             4932..6362
                     /locus_tag="EYO87_09580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic phosphate transporter"
                     /protein_id="HIC66228.1"
                     /translation="MSGPGRPFHTLDKDLGRITHVETAQLYAFRPVWRLGLAVLALVA
                     LLILAIGLTGRDAGAVGFGAGLVVAGWLGLAIGSNDVANSLGPAVGAGAIGLLPGLVL
                     VALAQIAGASLAGGAVTDRLASGIFDPGMLESGLRAQMAMLAALIGAACWITLATGIG
                     LPVSTSHSIVGGLAGAGIAALGASSLDWPSLAMIALVWIIAPVVSGALAAAVLILLRI
                     KVMVAADRVAAAQIWLPPLVGVMSGLFVTYLGLLASIATTGMLLAGLIAGLLADRLMR
                     RHLRSAFVLRGEKPSSKRLFRPPLLAAVVPLAFAHGANDVGNVAGPLTVIVTARGGEA
                     GGQVSLVAILLAAFAIAVGTLFFGRRLVRMVGSGITRLNAGRAFCVSLSTAATVLAAS
                     WAGLPVSTTHIAVGGIFGVGFAREWLDRRQRRQREVMPAEEARRRRLIRRSHVATITT
                     AWLVTVPLTALMGWLACVLILAATPG"
     gene            complement(6371..>7421)
                     /locus_tag="EYO87_09585"
     CDS             complement(6371..>7421)
                     /locus_tag="EYO87_09585"
                     /EC_number="6.3.4.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011747192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="nicotinate phosphoribosyltransferase"
                     /protein_id="HIC66229.1"
                     /translation="GESTWLRGNTFYGKRQMFRPDFMEFLEGLRLPPYQLEKRKGQYE
                     LTFEGTWPQVMLWEIPALAILMELRSRAVLKDMGRFELQVLYARAMTRLWEKVQTLRQ
                     LTDLRIADFGTRRRHSFLWQDWCVQAMIEGLGERFTGTSNCLIAMRRDIEAIGTNAHE
                     LPMIYAALADSDAELRQAPYEVLADWHEEHEGNLRIILPDTYGTEGFLKHAPDWLAGW
                     TGIRIDSGAPAEGAEAAIRWWRDRGEDPRQKLIIFSDGLDVDRIVALHRQFHGRVKVS
                     FGWGTLLTNDFRGFVPGDGLAPFSLVCKAVAADGRPTVKLSDNPAKAMGPAAEIERYK
                     RVFDVGHQALLDVVV"
BASE COUNT         1184 a         2376 c         2490 g         1371 t
ORIGIN      
        1 cccggccatc gcagcttcac cgtgctgcgc catccgctgc accgagcctg ggacgccttc
       61 atgcagcttc tgggtgacgc gccgccgccc ttgcggcagg tgatgcgcga ggttcatcgc
      121 gtgccgctgc caagggacga tgccctgatg gacctgacgg atgaccgcct cgccgcgctt
      181 tttgcggatt tcctcggatt tctgaagcgc aacctgaacg ggcagacgac gctgcccacg
      241 catccgaact gggccagcca gtccgaggtc gtggccggtt tcgcccattt cgccgcgccc
      301 gacatggtga tccgcgagga tcggatggca accgatctgg cccatctggc cgacaccgcc
      361 ggtatcgtgg cggcaacctg cccccgggcc gaggactggc ccgcattcct ggatgacccg
      421 gcgctggaac gggccgcgca tgccgcctat ctgcgcgact acgcgacctt cggctttgcc
      481 gaaccggcat aaccggaacc gccgccccgg cggcggatga ccctgcgcga cgccgctatc
      541 ctttcaggat cgccgccagt tccgcctgtt tttcccgcac cagctccgca tcgccatcgg
      601 attcgaggtt cagtcgcacc accggctcgg tgttcgactt gcgcagattg aagcgccagg
      661 tgccgaaatc cagcgacacg ccgtcaagat cgtcgcggct gtcggccttg tcctcgtagc
      721 gcccgatcag ccgggcgatc gcggcgtcgg gatcgtcgat gtgataattc gtctcgcccg
      781 aggatggata aagccgcatc cgttccgaca gcagttcggc cagcgtctgt cccttgcgcg
      841 acagaagttc gatcatcagc agccacggaa tcatgccgct gtcgcaataa tagaagtcgc
      901 ggaaataatg atgcgccgac atctcgccgc catagatcgc gccgacatca cgcatcttgc
      961 gcttgatgaa ggcatgaccg gtcttgctga ccacggcctc gccgcccgcc tcctcgatca
     1021 tcgcgcgggt gttcatgatg acgcggggat cgtggacgat cttctcgccg ggcgactttt
     1081 ccaggaaggc cgcgcccagc aggcccacga tatattcgcc gggaatgaat cggccgttct
     1141 cgtcgaaaaa gaagcagcgg tcgaaatcgc cgtcccaggc cacgcccaga tcggcctttt
     1201 cctgtttcat cttctcgacg gtcggcggct ggttctcggg cagcagcgga ttcgggatgc
     1261 cgttgggaaa gctgctgtcc acgtcatggt gcatccgcac gaacgtcagt ggcgcgccgc
     1321 ggcgttccag ttcgctggcg atcgcatcga aggtgggtcc ggcggtgccg ttgcccgcat
     1381 tgacgacgat cttcatcggc cgcagcgccg aaatgtccac gaaatccgcc atcgccctgg
     1441 catattccgc gcgggcatgg ctgaaatcgg tgacgctgcc ctttttcgcc gcggcaaacc
     1501 ggcccgacgt cgccagatcg acgatcggcg gcagttccgt tgccggatcc agcggcgccg
     1561 aaccgcgccc gacgatcttc atcccgttgt agttgatcgg attatgcgac gcggtcacct
     1621 cgataccgcc atccgtgtct tgaaagccgg tgtggaaata gacctcttcc gtccccgcca
     1681 gtcccagatc cagcacatcg gcgccgccat ctgtcagccc gtcgatcaga gccgccgcca
     1741 gttccggcga gctttcgcga ctgtcgcggc cgaccacgac gcacttggcc cgacgcgcct
     1801 cggcgaaagc ccggccgatc ctgtaggcga catcggcgtc caggttcttg cccagttcgc
     1861 cgcgcacgtc ataggccttg aaacaggtga tctctcgctt gcccagattg gatttgtcgg
     1921 tcatcggttc ccctcctccc tgcgcagggt cattcatagc gctagcagct tggcatcaga
     1981 attcaagtct gcggctggtc ccttggcatc gggtgacgcg gaccgcgaac ggctttagag
     2041 agggcgaaac gcatatgagg ctcaaatgga tgcaaaatct ctgatctccg cctattttca
     2101 ggccttcaat gacggccaga ccgaccggat gctggatttg ctgcatgagg acatcgaaca
     2161 tcacgtcaat gagggccgaa tccgcaaggg caaggcgctg tttgcggaat tcggccgcca
     2221 catgagccgt tcctaccgcg agaccctgac cgacatggtg atcttcgcca atgagacggg
     2281 cgaccgtgcc gctgccgaat tcatggtcaa tggcacctat ctgaagactg atgagggcct
     2341 gccagaggcg aaaggtcaga cctatcgcct gccggcaggg tcgttctttt ccattcgcga
     2401 tggcaggatc gcgcgggtga ccacctacta caacctcgcc gattgggtgc agcaggtcag
     2461 ccgatgagcg ttaccacccg cgtcctgacc ggagaatcgc tggccgccgc gctggatgat
     2521 gtggcccgcc tgcgcatcgc cgtattccgc gactggccct atctctatga cgggaatgcc
     2581 gattacgaac gcgattacct gcgtgcctat cggtcgccgg gcgccgttgt cgtcgcggcg
     2641 atggacggtg cgcgcatcgt cggtgccgcg acgggcgcac cgatgaccga ccatgccgag
     2701 gattttgcga cagcctttgc ggaccgcccg gaaaagctgt cacgcatctt ctattgcgcc
     2761 gaatcggtgc tgctgcccgc ctatcgcggg cgtgggatcg gacacgcctt tttcgacgcg
     2821 ctcgaggccc atgcccgcga tctgggccac gacttttccg ccttctgcag cgtgatccgg
     2881 ccggccgatc atccggcccg ccccgcagac tatcgcccgc tggatgattt ctggcgcaaa
     2941 cgcggctatg ctccgctcga gggcgtgttc gcgcggtttt cctggaagga tctgggccag
     3001 ccgcgcgaaa ccgaaaagaa actgcaattc tggatgaggc cattgtgaag attgccgccg
     3061 ccgcctatcc gatcgactgg cttgacgatt tcgacgccta cgagaccaag ttgacccgct
     3121 gggtcgccga tgccgagggc gcggatctgc tggtctttcc agaatacggg gcgatggaac
     3181 tggcctctct cggcgggcgc agcgtggcgg gcgatctgga ggcatcgctg cacgaggtgg
     3241 cgcggcacgg cgatgcggtc gcggccctgc atgaacgcct gacggcggag tatgattgcc
     3301 atatcctggc ggcgtccggc cccgctttcg agggtgggcg gccgacgaat cgcgcagtgc
     3361 tgtatggacc gggcggacgg atcggacatc aggacaagca gatcatgacc cggttcgagc
     3421 gcgacgactg ggatgtcgcc ggggctccgg gcctgcgggt tttcgataca gcgcttggcc
     3481 ggatcggggt gctgatctgc tatgacagcg aatttcccct gctggcccgc ccgctggccg
     3541 aggcggggat ggaattgctt ctggtgccgt cgtgtaccga cacggtggcg ggttttcacc
     3601 gcgtccgcat cggcgcgatg gcacgagccc tggaatgcca gtgcgtcgtg gttcacgccc
     3661 cgaccgtggg cgacgtggac tggaacccgg cgatagacgt caatcacggg cgcgccgcga
     3721 tctatggccc tccggatggg ttctggcccg aaaccggcat catcgccgaa ggcgcgatgg
     3781 atgagcccgg ctgggtaatg gcccggatcg atctgtctcg cgtcgccaga agccgcgccg
     3841 acggggcggt cctgcctttc gcccactggc cggaatcgga aaaatcgcgc ctcgtctgag
     3901 accttttcgc gtcatctggg cgcgaattta ccaggcgtta atgaaaactg ctttaaatgg
     3961 cggcatcaca agccatatct tgtggtcatg ctttatatca cagacaagat aactatcgag
     4021 gaatgggagc tttcggaaaa cttcacccgg tcgcagggac cgggcgggca gaatgtgaac
     4081 aaggtcgaga cagcggtcga gttgcggttc gaggcggagc gatctcccaa cctcgccgat
     4141 ccggtcaagc ggcggctgca acggcttgcc ggacgacgct ggacgcagga cggggcagtg
     4201 gtgatcctgg tgcaggaaac ccgctcgcag gcgcgcaacc gcgagatcgc gcgtgaccgg
     4261 atggcggatc tgatccggcg cgccagcgtc gcgcccaagc gacgcatcgc cacccggccg
     4321 acattgggca gccagcggag gcggctgaag gccaaggcca gtcgcgggca ggtgaaggcg
     4381 atgcggggaa aggtggagac ggacgagtga cgctgctggg gaaatcgttg cggatgctgg
     4441 tcggcaagcg cccgcccgcc ttgcaggtcg gcgccctgtg tcttcgaccg cgggacggca
     4501 aggtgctgat gatcaccagc cgcggcaccg ggcgctggat cattcccaaa ggctggccca
     4561 tgccggggca ttcgctggcc ggcgcggccg gtcgcgaagc ctgggaggaa gcgggcgccg
     4621 agggacggac aggccatcgc gaactggggc gctacatcta tgacaaggtg caggacagcg
     4681 gctttgccgt gccggtcgag gtccatgtct ttccgctgca tgtcgatcgg ctgagtgatg
     4741 tctatcccga atccggccag cggcatcggg aatggttcgc gcccgggcgc gccgcgcaac
     4801 tggtcgccga accgggcctc gctgcgattc tgcggggtct tggtgcgggc gccgatccga
     4861 agacggatac cgtcttgcgc ccgcgcggga gccgctgatc cggtggccgg tatcatgtgg
     4921 agaacgccga gatgagcggt cccggccgcc cctttcacac attggacaag gatctgggcc
     4981 ggatcaccca tgtcgagacg gcgcagctct acgcctttcg gcccgtctgg cgactggggc
     5041 tggcggtgtt ggcgctggtt gcgctgctga tcctggcgat cgggctgacc gggcgcgatg
     5101 cgggggcggt cggcttcggc gcgggactgg tcgtggcggg ctggctgggg ctggccatcg
     5161 gctcgaacga tgtggcgaat tcgctgggtc cagccgtcgg cgccggtgcc atcggcctgc
     5221 tgcccggcct ggtcctcgtt gcgctggccc agatcgcggg ggcgtcgctg gcgggcggtg
     5281 ccgtcaccga caggctggcc agtggcatct ttgatccggg gatgctggaa agcgggctga
     5341 gggcgcagat ggcgatgctg gcggcgctga tcggggcggc ctgctggatc acgctggcga
     5401 ccggcatcgg cctgccggtc agcacctcgc attccatcgt tggcggcctt gccggggcag
     5461 gaatcgccgc gcttggcgcg tcgtcgctgg attggccgtc cctggcgatg atcgcgctgg
     5521 tctggatcat cgcgccggtg gtctcggggg cgctggcggc ggcggtattg atcttgctgc
     5581 ggatcaaggt gatggtggcc gcggatcggg tcgcggcggc gcaaatctgg ctgccgccgc
     5641 tggtcggcgt gatgagcgga ttgttcgtca cgtatcttgg cctgctggcc tcgatcgcga
     5701 ccaccgggat gttgctggcc gggctgatcg ccggattgct ggccgatcgc ctgatgcggc
     5761 ggcatctgcg gtcggccttc gtgctgcgcg gcgagaagcc cagcagcaaa aggctgttcc
     5821 ggccgccgct gctggctgcg gtggtgccgc tggccttcgc gcatggtgcg aatgatgtcg
     5881 gcaatgtcgc cgggccgctg accgtgatcg tgaccgcgcg cggcggtgag gccgggggcc
     5941 aggtatcgct ggtcgccatc cttctggccg cttttgccat cgcggtgggc acgctgtttt
     6001 tcgggcgcag gctggtgcgg atggtcggca gcggcatcac gcggctgaac gcgggccgtg
     6061 ccttctgcgt ctcgctgtcc acggcggcga cggttctggc ggcatcctgg gcagggctgc
     6121 cggtctcgac cacccatatc gccgtcggcg gcattttcgg cgtcggtttc gcgcgtgaat
     6181 ggctggaccg ccggcaaagg cgccagcgcg aggtcatgcc ggcggaagag gcgcggcggc
     6241 gccggctgat ccggcgcagc cacgtcgcga cgatcacgac cgcctggctg gtgacggtgc
     6301 cgctgaccgc gctgatgggc tggctggcct gcgtgctgat ccttgccgcg acgccgggct
     6361 gaaagggccg ctagacgacc acgtccagca gcgcctgatg tccgacgtcg aagacgcgct
     6421 tgtagcgttc gatctcggcc gccgggccca tcgccttggc agggttgtcc gacagcttga
     6481 ccgtgggccg tccatccgca gcgaccgcct tgcagaccag gctgaacggt gccagcccgt
     6541 cgcccggcac gaagccgcga aaatcgttgg tcagcaacgt gccccaacca aagctgacct
     6601 tgacccggcc gtgaaattgt cgatgcagcg ccacgatcct gtccacatcc agcccatccg
     6661 agaagatgat cagcttctgc cgaggatcct cgccccggtc ccgccaccag cggatcgcgg
     6721 cctcggcgcc ctcggccggt gcgccgctgt cgatgcggat cccggtccag cccgccagcc
     6781 agtcgggcgc gtgtttcaga aaaccctcgg tgccataggt gtcgggcagg atgatgcgca
     6841 gattgccctc gtgttcctca tgccagtcgg ccagcacctc gtagggggcc tgccgcaact
     6901 cggcgtcgct gtcggccagc gcggcataga tcatcggcaa ttcgtgcgca ttggtgccga
     6961 ttgcctcgat gtcgcgccgc atggcgatga gacagttcga ggtgccggtg aaccgttcgc
     7021 ccagcccctc gatcatcgcc tggacgcacc agtcctgcca caggaagctg tgcctgcgcc
     7081 gcgtgccgaa atcggcgatg cgcagatcgg tcaactggcg cagggtctgg accttttccc
     7141 acagccgggt catggcgcgg gcatagagaa cctgcaattc gaaccgcccc atgtccttca
     7201 gcacggcgcg cgagcgaagt tccatcagga tggcaagggc ggggatttcc cacagcatga
     7261 cctgcggcca ggtgccttca aaggtcagct cgtactggcc cttgcgcttt tcaagctggt
     7321 agggcggcag gcgcagccct tcgaggaatt ccatgaaatc ggggcgaaac atctgtcgct
     7381 tgccgtagaa ggtgttgcca cgcagccacg tgctttcgcc g
//
LOCUS       DTVW01000725            1035 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1888587, whole
            genome shotgun sequence.
ACCESSION   DTVW01000725 DTVW01000000
VERSION     DTVW01000725.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1035)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1035)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1035
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1888587"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            8..295
                     /locus_tag="EYO87_09590"
     CDS             8..295
                     /locus_tag="EYO87_09590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011746916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66230.1"
                     /translation="MPLLAALAACAPIPVEQAERVCLRDAELAQAPRGEVALGVGSGG
                     GGSRLGGSVDLEISSDYIMQRDPSDVFNRCVVNRSGQMPTRVLADQPGWRG"
     gene            300..>1035
                     /locus_tag="EYO87_09595"
     CDS             300..>1035
                     /locus_tag="EYO87_09595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66231.1"
                     /translation="MTAAPTKSDQRRLILHLGVQKTGSTAIQRHLNRNAAALARRLIV
                     RTPEEGSPMRPLGRAAIAYSLGPTEDREIALRIAFEDVLETLPANDLPVLLSHENLAG
                     AMPGNGGETRLYPQLPRIAGLLSRCAAGFAVDFVIYTRSMTAWKASVWAQAVRTDGYQ
                     HGFEDFLNRTDAMPGWGDLIRRMADVLGPDRLCRFKLEDEPDPGRPGRLLLHHAGLDD
                     AIIEALAPLDGPAMQRLNAGSTEFLRR"
BASE COUNT          155 a          331 c          370 g          179 t
ORIGIN      
        1 ccggtccgtg ccgctgctgg cggcgctggc agcctgtgct ccgataccgg tggagcaggc
       61 ggaacgggtc tgcctgcgcg atgccgaact ggcccaggct ccgcgcggcg aagtcgccct
      121 gggggtgggc agcggtggcg gaggttcgcg cctcggcggt tcggtcgatc tggaaatttc
      181 cagcgattac atcatgcagc gcgatccctc ggacgtgttc aaccgctgcg tggtgaatcg
      241 atcgggacag atgccgacgc gggttctggc cgaccagcct ggctggcggg gctaggccga
      301 tgacggcagc gccgacgaaa tccgaccagc gccgcctgat cctgcatctg ggcgtgcaga
      361 agacgggcag caccgcgatc cagcgccatc tgaaccgcaa cgccgccgcg ctggcccggc
      421 ggctgatcgt gcgcaccccc gaggagggct cgcccatgcg gcctttggga cgcgcggcga
      481 ttgcctattc gctgggaccc accgaggacc gcgagatcgc gctgcggatc gccttcgagg
      541 atgtgctgga gacgctgccc gccaatgacc tgccggtgct tctgagccac gaaaacctgg
      601 ccggcgcgat gcccggcaat ggcggtgaga cgcggcttta tccgcaattg ccgcggatcg
      661 cgggtctgct gtcgcgctgc gcggcgggct ttgcggtgga tttcgtcatc tacacacgca
      721 gcatgacggc gtggaaggcc agcgtctggg cgcaggccgt acgcaccgac ggctatcagc
      781 acggtttcga ggatttcctg aaccggaccg atgcgatgcc tggctggggc gatctgatcc
      841 gccggatggc cgatgtcctg gggcctgatc gtttgtgccg cttcaagctg gaagacgagc
      901 ccgatcccgg tcgtccgggg cggctattgc tgcaccatgc cgggctggac gatgccatta
      961 tcgaggcgct tgccccgctg gatgggcctg cgatgcagcg actcaatgcc ggttcgaccg
     1021 aattcctgag gcggc
//
LOCUS       DTVW01000726            2449 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1891279, whole
            genome shotgun sequence.
ACCESSION   DTVW01000726 DTVW01000000
VERSION     DTVW01000726.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2449)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2449)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2449
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1891279"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..537)
                     /locus_tag="EYO87_09600"
     CDS             complement(<1..537)
                     /locus_tag="EYO87_09600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019298053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HIC66232.1"
                     /translation="MDEITADRQGFDAPRMPEDAITASILAAVAEQRLPAGTKLGEQA
                     LSDLFQCHRANVRRALTSLAAQHVVELRPNRGAFVATPSPEEAREVFEARRTIERTLA
                     RSAIGRATDADIAKMRATIAQEVTARASGDKPAELRLSRAFHMRLATIAANSVLERFL
                     TELTLRTTLILGLYNETGT"
     gene            648..1349
                     /locus_tag="EYO87_09605"
     CDS             648..1349
                     /locus_tag="EYO87_09605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011512772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate/glutamate racemase family protein"
                     /protein_id="HIC66233.1"
                     /translation="MRILVMNPNSTVSMTDKIVESARQAASEGTEIIAATGGAPAPAS
                     IQGHHDEAMSVPGLIARLKQAEADGVDGVVVACFDDPGIRACREVFSGPVLGICEAAT
                     KAASMIATSFSIVTTLPRSAPIIEHLIHGYGLSHQCRQVRSAAIPVLALEEEGSGARE
                     KVRDEILRAVREDRCEAVVLGCAGMADLTAWLTEETGVPVIDGVTAATRMVEALIGCG
                     LKTSKVGAYAPPIET"
     gene            1375..>2449
                     /locus_tag="EYO87_09610"
     CDS             1375..>2449
                     /locus_tag="EYO87_09610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019298051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter"
                     /protein_id="HIC66234.1"
                     /translation="MAMNAEIDASHVDTLDQKAIGEESLAPQTTRIMDPWSYLFAWLG
                     GCVSIGTFTVGSGLVGTLNLLQTFVAIGIGCLVIGVALTINGQAGHKYGIPFMVQARS
                     AFGFTGSRIPALVRSVPAIVWFGFQSWIGAGALNLVSATMFGYDNIVVFFVGFQFLQI
                     GLSVLGFHGIKWLENIGSIFIIGALIYMFYSVISKYGDEISTNLVNVEGTWGAPFWGA
                     TMLFLGIYSTMMLNVSDYSRELRHNVGPFRQVVIYSNSIFPATLFMGLIGLMVSGATG
                     EVDPIKVFSSAMDNTFLLVVTLLFIAFAQVTTNILNNVVPPAYALMDVFKLKFRTSAI
                     LVGLLAFSTFPWELVKDESAAGLN"
BASE COUNT          439 a          711 c          794 g          505 t
ORIGIN      
        1 cgtgccggtt tcgttgtata ggccaaggat gagggtggtc ctgagcgtca attcggtcag
       61 gaagcgttcc agcacactgt tggcggcgat cgtcgcaagc cgcatgtgaa acgctcgcga
      121 cagccgtagc tcggccggtt tgtcgccgct tgcgcgggct gtgacctcct gcgcgatcgt
      181 ggcgcgcatc ttcgctatat cggcgtcggt ggcgcgtccg atcgcggagc gcgccagggt
      241 ccgttcgatc gttcggcggg cctcgaagac ctcgcgggcc tcctcaggag acggcgttgc
      301 gacgaacgcg ccgcgattgg gtcggagctc gaccacatgc tgcgccgcca gactcgtcaa
      361 ggcgcgccgc acgttggcgc ggtggcattg gaacagatcg ctcagcgcct gttctcccag
      421 ctttgtgcct gccggcaatc gctgctcggc gactgcggcc aggatggatg cggtgattgc
      481 atcctccggc atgcggggtg cgtcaaatcc ctgacgatct gcggtgattt cgtccatgcc
      541 acgagcttat cccatatcga tcaagcgcgg caacacgatg gtgacacgta cagggttgac
      601 ttgatgacaa ttattgttga caatatttgc taacaaaggg aggggccatg agaatcctgg
      661 ttatgaaccc gaactcgacg gtgtcgatga ccgacaagat cgtcgagagc gcgcgccagg
      721 ccgcgagtga gggaacggag atcatagcgg cgaccggagg agcgccagcg cctgccagca
      781 tccaggggca tcacgatgag gcgatgtcgg tgccgggcct gatcgcccga ctgaagcagg
      841 ctgaggcgga cggggtggac ggagtcgtgg tggcctgttt cgacgatccc ggtatccgtg
      901 catgccgaga ggtgttctcg gggccggttc ttggcatctg tgaggccgcg acgaaggccg
      961 ccagcatgat cgccacgtca ttttcgatcg tcacaacgct gccccggtcg gcaccgatca
     1021 tcgaacatct tatccacggg tacggccttt cgcatcagtg caggcaggtc cggtcggcgg
     1081 cgatcccggt tctggcgctg gaggaggagg gatccggcgc ccgagagaaa gtgcgcgacg
     1141 agatcctgcg cgcagtccgg gaggatcgct gcgaggcggt cgtgctgggc tgcgcgggca
     1201 tggccgacct gacagcatgg ttgaccgagg agactggcgt gccggtgatc gacggcgtga
     1261 cggccgcaac ccggatggtc gaagcgctga tcggttgcgg cctgaaaacc agtaaggtgg
     1321 gcgcttacgc gcctccaata gaaacctgat cgcaacttca agggaggacc agatatggcg
     1381 atgaatgcag aaattgacgc ttcccacgtc gatacgctcg accagaaggc gatcggcgaa
     1441 gaaagcctag cgccccagac gacccggatc atggacccat ggtcctatct cttcgcctgg
     1501 cttggaggct gtgtgtccat cgggacgttc accgtcggct cggggcttgt cgggacactg
     1561 aacctgctgc agactttcgt ggcaatcggc atcggctgcc tggtcatcgg cgtagcgctg
     1621 acgatcaacg gccaagccgg ccacaaatac ggcatcccgt tcatggtgca ggcccgttcc
     1681 gccttcggct tcaccggcag ccgcatcccg gcgctcgtgc gttcggtgcc ggcaatcgtg
     1741 tggttcggct ttcaaagctg gatcggcgcc ggtgcgctta acctcgtctc ggcgaccatg
     1801 ttcggctacg acaacatcgt ggtgtttttc gtgggcttcc aatttctgca gatcggcctg
     1861 tcggtactcg gctttcacgg gatcaagtgg cttgagaaca tcggctcgat cttcatcatc
     1921 ggggcgctga tctacatgtt ctacagcgtc atcagcaagt acggcgatga gatctcgacc
     1981 aatctcgtga atgtcgaagg cacttggggc gcgccgttct ggggcgcgac gatgctgttt
     2041 ctgggcatct acagcacgat gatgctgaac gtctctgact actcgcggga gttgcgtcac
     2101 aacgtcggcc cgttccggca agtggtgata tactcgaact cgatcttccc ggcgaccttg
     2161 ttcatgggcc ttattggact gatggtgtct ggcgcgacgg gtgaagtcga tccgatcaag
     2221 gtattctcca gcgcaatgga caacacgttt ctgctggttg tgacgctgct cttcatcgcc
     2281 ttcgcgcagg tcacgaccaa tatcttgaac aacgtggttc cgcccgccta cgcactgatg
     2341 gacgtcttca agttgaagtt caggacctcg gcgatcctcg tcgggctgct cgccttcagc
     2401 accttcccct gggagctggt gaaggatgaa tccgctgcgg ggctgaacc
//
LOCUS       DTVW01000727            1601 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1892552, whole
            genome shotgun sequence.
ACCESSION   DTVW01000727 DTVW01000000
VERSION     DTVW01000727.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1601)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1601)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1601
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1892552"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..385
                     /locus_tag="EYO87_09615"
     CDS             <1..385
                     /locus_tag="EYO87_09615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012430149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66235.1"
                     /translation="EQAAAAAMSLQEQASGLRQAVEAFRTQAGAQANVVPAVSVAARV
                     AAKPALKAKAVPRRAAKPKAAGRNAAEPIAQTGAATAAPASAKEQQRERTAAAAETKA
                     AASAPKLPVPKLVAAGGDDSDWETF"
     gene            609..>1601
                     /locus_tag="EYO87_09620"
     CDS             609..>1601
                     /locus_tag="EYO87_09620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004627766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HIC66236.1"
                     /translation="MGWIKRLPVSTVLTGGFLIVAAMGAAIGGLGIYTITQLTKASEE
                     LAQKQMRAITQMGSAANSLAHASRAQTALLIATTLTERKTLSTQIADSMQHLKDGVEN
                     VRPLFTSDEGKKMIREVDAIYPVWGRRMTDFVALMDKQGLDPTQFDSRVTAENVGLLD
                     DTAAFEKTLDKMVKRVEEVSAASTVKARDDAHRSRLVMMVMACAGALLGIVLGLVIAR
                     RLSRQLGGEPSYAAEIARRIAAGDLAVHVQTRPGDHDSMLFAMAQMQQQLTGTITNIK
                     SSADSIASATKQIAAGNADLSQRTEEQASSLEETASSMEELTSIVKQNADNARQA"
BASE COUNT          315 a          517 c          529 g          240 t
ORIGIN      
        1 ggagcaggct gctgccgccg cgatgtcgct gcaggagcag gctagcgggc tgcgccaggc
       61 tgtggaggcg ttccgcacgc aagccggcgc gcaggccaac gtggtacccg cagtgtcggt
      121 ggccgcgcgc gtggcagcca agccggcatt gaaagccaag gccgtgcccc gccgtgccgc
      181 caagccgaag gccgcaggcc gaaatgccgc tgaacccatc gcgcagaccg gggctgcaac
      241 tgcagcgccg gcctccgcca aggaacaaca acgcgagcgc accgccgccg ctgccgagac
      301 caaagcggct gcgtcagcgc ccaagttgcc cgtacccaag ctcgttgccg caggcggcga
      361 cgatagcgac tgggagacct tttgaccatg tatgcacggg atcttcgctg ctcgcgaaag
      421 ctctctcgtg tgtgtttgtg gtgtgcagcc tgccctccgg ggcaggtttt tttttgcctg
      481 ggctagtgcc cactgaagcc ggggtgaccc cccactgaag tggcatgacc ccacggcggt
      541 tctaaagagc cgccccccgc aggccgatag cggtaggggg catataaaaa caggaagagg
      601 tagacaacat gggttggatc aagcgtttgc cggtgtccac ggtactcacc ggtggtttcc
      661 tgatcgtggc ggccatgggc gcggccatcg gcgggttggg catctatacg atcacgcagt
      721 tgacaaaggc cagcgaagag ctggcgcaaa agcagatgcg cgccatcacg cagatgggca
      781 gcgcggccaa cagcctggcg catgccagcc gtgcgcagac cgcattgctg attgccacca
      841 cgctcaccga gcgcaagacg ctcagcacgc agatcgccga cagcatgcag cacctgaaag
      901 acggggtgga gaacgtgcgc ccgctgttca cgtcggacga aggcaagaag atgatccgcg
      961 aggtcgatgc gatctacccc gtctggggca ggcgcatgac cgatttcgtt gcgctgatgg
     1021 acaagcaggg cctggacccg acccagttcg acagtcgcgt cacggccgag aacgtcggcc
     1081 tgctggacga caccgccgcg tttgaaaaga cgctcgacaa gatggtcaag cgtgtggaag
     1141 aggtctccgc cgcgtccacc gtcaaggccc gtgacgatgc acaccgctcg cgcctggtga
     1201 tgatggtgat ggcctgtgca ggtgcgctgc tcggcatcgt gctgggcctg gtcattgcgc
     1261 gccggctgtc gcgccagttg ggcggtgagc cttcgtacgc ggccgagatc gcgcgccgaa
     1321 ttgccgccgg cgatctggcc gtgcacgtgc agacccgccc cggcgaccat gacagcatgc
     1381 tgttcgccat ggcgcagatg cagcagcaac tgaccggcac gatcaccaac atcaagagtt
     1441 ccgccgattc cattgccagc gccaccaagc agatcgccgc cggcaatgcc gacctctcgc
     1501 agcgcacgga agagcaggcc tcgtcgctgg aggaaaccgc gtccagcatg gaagagctga
     1561 ccagcatcgt gaagcagaac gccgacaacg cgcgccaagc c
//
LOCUS       DTVW01000728            1714 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1893131, whole
            genome shotgun sequence.
ACCESSION   DTVW01000728 DTVW01000000
VERSION     DTVW01000728.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1714)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1714)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1714
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1893131"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            1..450
                     /locus_tag="EYO87_09625"
                     /pseudo
     CDS             1..450
                     /locus_tag="EYO87_09625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011750049.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            883..1449
                     /locus_tag="EYO87_09630"
     CDS             883..1449
                     /locus_tag="EYO87_09630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010396060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit delta"
                     /protein_id="HIC66237.1"
                     /translation="MTVANSVSMSQSIAGRYAQAVFDIVKDDGGLDDLARQTDDLIAA
                     LDDSDDLRNLIASPIYTRDQQSRAIAALADKMGLSKTLSNTLKLMAQNRRLFVLPQLL
                     GQLQRLIAVERGEVTADVTSAVALSDDQQKRLRDTLAEKSGKTVKLNTRVDESLIGGM
                     IVKLGSQMVDSSVRSKLASLQNAMKEVG"
     gene            1449..>1714
                     /locus_tag="EYO87_09635"
     CDS             1449..>1714
                     /locus_tag="EYO87_09635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008183383.1"
                     /note="produces ATP from ADP in the presence of a proton
                     gradient across the membrane; the alpha chain is a
                     catalytic subunit; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HIC66238.1"
                     /translation="MGIQAAEISAILKDQIKNFGQDAEVAEVGQVLSVGDGIARVYGL
                     DKVQAGEMVEFPGGVRGMVLNLETDNVGVVIFGDDRDIKEGDTV"
BASE COUNT          304 a          538 c          600 g          272 t
ORIGIN      
        1 agcatcgacc ggctggtgat gctgcacgga ctggagacca gcgaccatcc cgccgcgctg
       61 ctggacgaag cctggcgcgc gcttgggccg ggtgggcgga tgatggtgat ggtgccgaac
      121 cgggccgggc tttgggcggc gtcggacggc acacccttcg ggctgggccg cagctatacg
      181 gccgggcaga tcgaatcgca gacgcgcaag tccgggttcg tggcgcattg gcatggatcg
      241 gcggtctata ttccgccctc ggaccggcgt ttctggctgg gcagcgctca gatgtgggaa
      301 cgcaccgggg ccaggatcag ccgggttctg atcgccggtg tggtgctgat cgaactggcc
      361 aagcagaccc gcgcgcccgt cgggccgggg cgggcgatcc aggttcccgg cccgcgcgag
      421 atcctggacg gcgtcgggct gccacggccg ggacgggcgg gcacggcgcg acggggcggc
      481 gtccagcggg ccggaatcgc aagacggcga tgagggcggc cccggcaagg acgcgccgca
      541 ggcgatctcg atggcccatg gttctcgtgt gcatggcggt cgctgcggcg agccggccca
      601 tgcgacagcc cgccgcagtc gggggcatga gatttcgcgc agcgatgacc gatcccgcgt
      661 gaaccgcatg acggcgtgcc tggcgtcggg gtgaccggca ccgcaatcag ggccgcgaca
      721 ctctcattac cgtgtgcttg gcggttgccg cccacggaat cacctgctag agacaccgca
      781 gattcatggg cggccccaag agccgcacca ccgcgacccg cgcgccccgc gactgaccgg
      841 aaccttcccg gcccgccagc ggggtttgcg caaacctgaa ggatgaccgt ggccaactct
      901 gtatccatgt cccagagcat cgccggacgc tatgcgcagg ccgtcttcga catcgtgaag
      961 gacgatggag ggctggacga tctggcccgc cagacggatg acctgatcgc cgcgctggac
     1021 gacagcgacg atctgcgcaa cctgatcgcc tctccgatct atacccgcga tcagcaatcg
     1081 cgtgcgatcg ccgcgctggc cgacaagatg gggttgtcta agaccctgtc gaacacgctg
     1141 aaactgatgg cgcagaaccg ccgcctgttc gtgctgccgc agcttctggg ccagttgcag
     1201 cggcttattg ccgtcgaacg cggcgaggtt acagccgatg tcaccagcgc cgtcgcgctg
     1261 agcgacgatc agcagaaacg gctgcgcgac acgctggccg aaaaatccgg caagaccgtg
     1321 aaactgaaca ctcgcgtcga tgaaagcctc atcggcggca tgattgtcaa gctgggctcg
     1381 cagatggtcg attcgtcggt ccgctcgaag ctcgcctccc tccagaacgc tatgaaagag
     1441 gtcggataat gggaatccag gctgccgaga tttcggccat cctcaaggat cagatcaaga
     1501 atttcggtca ggatgccgag gtggccgagg tcggccaggt gctgtcggtc ggtgacggca
     1561 tcgcccgcgt ttacggcctc gacaaggtgc aggccggcga gatggtcgag tttcccggcg
     1621 gtgtccgggg catggtgctg aaccttgaga ccgacaacgt gggtgtcgtg atcttcggcg
     1681 acgaccgcga catcaaggaa ggcgacacgg tcaa
//
LOCUS       DTVW01000729            1190 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1898138, whole
            genome shotgun sequence.
ACCESSION   DTVW01000729 DTVW01000000
VERSION     DTVW01000729.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1190)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1190)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1190
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1898138"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..372
                     /locus_tag="EYO87_09640"
     CDS             <1..372
                     /locus_tag="EYO87_09640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011750101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66239.1"
                     /translation="HEVGHHVQNLVGTLSRVNASRQRISERDSNALSVLTELQADCYA
                     GIWARQARDRFGSLEQGDLEEAANAARAVGDDVIQSGAGRTPVPDSFTHGSARQRQTW
                     LMRGFESGDMAQCQTFSEAGP"
     gene            complement(511..696)
                     /locus_tag="EYO87_09645"
     CDS             complement(511..696)
                     /locus_tag="EYO87_09645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010395880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66240.1"
                     /translation="MNNLIWFLRASRWARHPPSARMVKLVLAIVAAGLIILALEWLDL
                     WPDWAQMQNGRGLRLPR"
     gene            763..>1190
                     /locus_tag="EYO87_09650"
     CDS             763..>1190
                     /locus_tag="EYO87_09650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011750103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RatA family
                     toxin"
                     /protein_id="HIC66241.1"
                     /translation="MPQHQDNRDLPYSARQMFDLVADVERYPEFLPWNSAARVRSRQT
                     RPDGAEEIAADLVISFKVFRERFGSRVVLWPADPRTGALKIDTEYLDGPFRYMRSGWT
                     FHDRPEGGCRVEFFVDFEFRNAILQRLIGVVFHEAMARIVR"
BASE COUNT          217 a          403 c          377 g          193 t
ORIGIN      
        1 cacgaggtcg gccaccacgt gcagaatctt gtgggcacgc tgtcgcgggt caacgccagc
       61 cgccagcgca tcagcgaacg ggattcaaac gcgctgtcgg tcctgaccga gcttcaggcc
      121 gattgctatg ccgggatctg ggcgcggcag gcgcgggatc gattcggatc gctggaacag
      181 ggcgatctgg aagaagcggc caatgccgcc cgcgcggttg gcgacgacgt gatccagtcc
      241 ggcgccggac ggacgccggt gcccgacagc tttacccatg gcagcgccag gcaacgccag
      301 acatggctga tgcgtggttt cgaatcaggc gacatggcgc aatgccagac attcagcgag
      361 gccggaccct gaggcccgcc acgcagccgg aaaggaggat gacatgttga tagcgatcgg
      421 attgctggga ctggccgggc ttgcggccgc ccacgccgcg cagccgcgcc cgcgccgtgt
      481 gcgggcggat gcgcctcgcc attgatctca ctaccggggc agtcgcaggc cgcgaccgtt
      541 ctgcatctgc gcccagtcgg gccacaggtc cagccattcc aacgccagga tgatcagtcc
      601 ggccgccacg atcgcgagaa ccagcttgac catccgggcg cttggcgggt gccgcgccca
      661 tcgcgatgcg cgaagaaacc agatcaggtt gttcattccc ggcctcgcct gctagatgcg
      721 cagagccgac cagacaacgc gcccaaagac aagagccccg ccttgccgca acaccaggac
      781 aaccgcgacc ttccctacag cgcccgccag atgttcgacc tcgtcgccga tgtcgaacgc
      841 tatccggaat ttttgccctg gaacagcgcc gcccgcgtcc ggtcgcgcca gacccgaccg
      901 gacggcgccg aggagatcgc ggccgatctt gtcatcagtt tcaaggtctt tcgcgaacgt
      961 ttcggcagcc gcgtcgtgtt gtggcccgcc gatccccgga ccggcgccct gaagatcgac
     1021 accgaatatc tggacggccc gttcagatac atgcgcagcg gctggacttt ccacgaccgt
     1081 cctgaaggcg gctgccgggt ggaattcttt gtcgatttcg aatttcgcaa cgccatactg
     1141 caacgcctga tcggcgtcgt cttccacgag gcgatggcgc gcatcgtccg
//
LOCUS       DTVW01000730            1030 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1898221, whole
            genome shotgun sequence.
ACCESSION   DTVW01000730 DTVW01000000
VERSION     DTVW01000730.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1030)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1030)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1030
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1898221"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..695
                     /locus_tag="EYO87_09655"
     CDS             <1..695
                     /locus_tag="EYO87_09655"
                     /inference="COORDINATES: protein motif:HMM:PF00480.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HIC66242.1"
                     /translation="RRIAGLGIATPFRLWDWGAEMAAWKDHDLRAELARDLPFPVFLE
                     NDATTACGAELIFGRQNLPADFLHIYIAHFPGGGLVLDGKLRFGPQRNAAALGSILVP
                     DGGQLLERASVASLEARLGRAVHPDDSAWDVPEAIEAEWAEQAGRALAFVSLAAVSIA
                     DLPLVVIDGAIPPATRARLVAATRHAMTALPREGIVPPEVIAGSLGRNARVLGAAALP
                     LSHFFQPDGQLG"
     gene            862..>1030
                     /locus_tag="EYO87_09660"
     CDS             862..>1030
                     /locus_tag="EYO87_09660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011909175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HIC66243.1"
                     /translation="MTKRTSAKYKIDRRMGENIWGRAKSPVNRREYGPGQHGQRRKQK
                     LSDFGTQLRAKQ"
BASE COUNT          167 a          347 c          342 g          174 t
ORIGIN      
        1 accgccggat cgccggcctc ggcatcgcca cacccttccg attgtgggat tggggcgccg
       61 agatggccgc ctggaaggat cacgatctgc gcgcggaact ggcccgggat ctgccttttc
      121 cggtctttct ggaaaacgat gcgaccaccg cttgcggggc cgaactgatc ttcggccgcc
      181 agaaccttcc cgccgatttc ctgcacatct acatcgcgca ttttccgggt ggcggattgg
      241 tcctggacgg caagctgcgc ttcgggccgc aacgcaacgc ggccgcactg ggatcgattt
      301 tagtgcccga tggcggacaa ttgttggaac gcgcctcggt cgcctcgctt gaggcgcggc
      361 ttggccgggc cgtgcatccc gacgattcgg cctgggacgt tcccgaggcg atcgaggcgg
      421 aatgggccga acaggccgga cgcgcgttgg cattcgtgtc cctggcggcg gtgtcgatcg
      481 ccgatctgcc gctggtggtc atcgacggcg cgataccgcc cgcgacccgc gcccggctgg
      541 tcgcggcgac gcgacatgcg atgacggccc tgccccgcga aggcatcgtg ccgcccgagg
      601 tgatcgcggg cagccttggc cgcaatgccc gcgtcctggg tgccgccgcg ttgccattgt
      661 cgcatttctt ccagcccgac ggccagcttg gctgagaccg cgcccatccg tcggcggggt
      721 gcggtcacga tcgcggttga caccgccggc acggcctcta taagcgcgca cttcattggt
      781 gttggtggcc cccgcaaggg gatgcctgtc gggcctgaag ccagaggaca acgcccttca
      841 catgaaggaa ggagatcagc cgtgaccaaa cgcacgtctg ccaagtacaa gattgaccgc
      901 cgcatgggcg aaaatatctg gggccgcgcc aaatcgccgg tcaaccgccg cgaatacggt
      961 cccggccagc acggccagcg ccgcaagcag aagctgtcgg atttcggcac ccagctgcgc
     1021 gccaagcaga
//
LOCUS       DTVW01000731            1133 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1898409, whole
            genome shotgun sequence.
ACCESSION   DTVW01000731 DTVW01000000
VERSION     DTVW01000731.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1133)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1133)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1133
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1898409"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>1133
                     /locus_tag="EYO87_09665"
     CDS             <1..>1133
                     /locus_tag="EYO87_09665"
                     /inference="COORDINATES: protein motif:HMM:PF07587.9"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1553 domain-containing protein"
                     /protein_id="HIC66244.1"
                     /translation="DAYHAKMRKWEVATAKLRVERDRLASPFFQQTQRGMGGQFPPHL
                     QAILDKADEDRTPYQRQLVILAGKMLRVDRKKMAGRMKGDVRKRWDELTKELAAFDKQ
                     RPKKLSVARGVRDIGSEASPTTIPGEDANDVIAPGFLSVLDPAEAKITPVSLTSKSTG
                     RRATLARWITDPNNPLTARVAVNRLWQHHFGRGIVASSGDFGTQGDEPTHPKLLDWLA
                     DEFVQRGWSLKVMHRLMMTSAVYRQTALRDVDATTRKIDPANDLLWRMRSRRIEAEVM
                     RDAMLAVSGELSLTMFGESVLPELPKGLSARYGWKPTPGADQQNRRSIYVHIKRSLIL
                     PFFLAFDGPDVDATCPVRFVTTQPTQSLSMLNGEFLNQQAAILA"
BASE COUNT          213 a          358 c          377 g          185 t
ORIGIN      
        1 gatgcgtatc acgccaagat gcggaagtgg gaagtcgcga ccgcgaaact tcgtgtggaa
       61 cgagaccggt tggcctcgcc gtttttccaa cagacgcagc gcggcatggg cggccagttc
      121 ccgccgcact tgcaggcgat tctcgacaag gccgacgaag accgcacgcc gtaccagcgg
      181 cagttggtca tcctggccgg caagatgctt cgcgtcgacc gcaagaagat ggccggccgc
      241 atgaagggcg acgtgcgcaa gcggtgggac gagctgacca aagagctggc ggccttcgac
      301 aagcagcgcc cgaagaagct gtcggtcgcc cgcggcgtgc gagacattgg cagcgaggcc
      361 tcgccgacca cgatccccgg cgaggatgcc aacgacgtga tcgcccccgg tttcttgagc
      421 gtgctcgatc cggccgaggc gaaaatcacc ccggtctcgc tgacctccaa aagcacgggt
      481 cgccgcgcga cgctggcccg ctggatcacc gatcccaaca atccgctgac ggcccgcgtg
      541 gcggtcaatc ggctctggca gcatcacttc ggccgcggca tcgtcgcatc ctcgggcgat
      601 ttcggcacgc agggagacga accaacgcat ccgaagctgc tcgactggct ggccgacgaa
      661 ttcgtccaac ggggttggag cctgaaggtg atgcaccggc tgatgatgac ttcggccgtg
      721 tatcgacaaa cggcactgcg cgacgttgac gcgacgactc gcaagatcga cccggccaac
      781 gacctgctgt ggcggatgcg ctcgcggcgg atcgaggccg aggtgatgcg cgatgcgatg
      841 ctggcggtca gcggcgagct gagcctgacg atgttcggcg agagcgtgct gccggagctg
      901 cccaagggac tgtcggcccg atatggctgg aagccgacgc cgggggccga tcagcagaat
      961 cgccgtagca tttacgtgca catcaaacgc tcgctgattc tgccgttttt cttggccttt
     1021 gacgggcccg acgtcgatgc gacttgtccg gtccggttcg tgacgacgca gcccactcag
     1081 tcgctgtcga tgctgaacgg cgaattcctc aatcagcagg cggcgatcct ggc
//
LOCUS       DTVW01000732            1686 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1898647, whole
            genome shotgun sequence.
ACCESSION   DTVW01000732 DTVW01000000
VERSION     DTVW01000732.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1686)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1686)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1686
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1898647"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..357
                     /locus_tag="EYO87_09670"
     CDS             <1..357
                     /locus_tag="EYO87_09670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011747219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetylglutamate kinase"
                     /protein_id="HIC66245.1"
                     /translation="NGDTAAGAIAGALRADRLLLLTDVAGVKDQSGEVLTQLHPDQVR
                     EMIGDGRISGGMIPKTETALQAIDEGVRAVVILDGRVPHACLLELFTEHGAGSLIRST
                     EPRIKAHGLRQGEDGL"
     gene            347..964
                     /locus_tag="EYO87_09675"
     CDS             347..964
                     /locus_tag="EYO87_09675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008232602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin"
                     /protein_id="HIC66246.1"
                     /translation="MVCEPNLTAPAGLTIAGFCPDAAATIVLIAPEGAAFWRRFTRSA
                     EYADGRPHPMDRWSRRIIGAWAGRLDAQAIFPSDGPPYPQFFAWALASGRCWSSPVGM
                     LVHDEAGLLISFRGALRVPGGLLPLPAAATSPCEACPQPCRDACPAGAFDDGYITARC
                     HDFLDQPQGRDCMTGGCRVRRACPISLGCGRLRQQSEWHMRQFHP"
     gene            961..1479
                     /locus_tag="EYO87_09680"
     CDS             961..1479
                     /locus_tag="EYO87_09680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010396860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HIC66247.1"
                     /translation="MTPLGHRRLILTRHAKSAWDDPALSDHDRPLNDRGRRSARELGD
                     WMASRGHEPEEVLCSSSQRTKETWAMVEGAPLEVRPLLRIEPGLYHASPDKMLTILRT
                     ASHPTVMMLGHNPGIAELAALLPARPPMDPDFRRYPTCATLVVDFQIDTWSQAEPGQG
                     SVMDFVRFDGRA"
     gene            complement(1574..>1686)
                     /locus_tag="EYO87_09685"
     CDS             complement(1574..>1686)
                     /locus_tag="EYO87_09685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019953343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HIC66248.1"
                     /translation="IFMDQGQIVEQNNPHDFFNNPRSERTKLFLSQILGH"
BASE COUNT          269 a          565 c          560 g          292 t
ORIGIN      
        1 aatggcgaca ccgcggcggg tgccattgcc ggtgcgctca gggccgaccg cctgctgctg
       61 ctgaccgatg tcgcgggcgt caaggaccag tccggcgagg tcttgacgca acttcacccc
      121 gatcaggtcc gcgagatgat cggcgatggc cggatcagcg gcggcatgat ccccaagacc
      181 gaaaccgcgc tgcaggcgat cgacgagggc gttcgtgcgg tggtgatcct agacggaagg
      241 gtgccccatg cctgcctgct ggaattgttc accgaacatg gcgcgggcag cctgatccgc
      301 tcgaccgagc cgcgaatcaa ggcgcatgga ttgcggcagg gcgaggatgg tctgtgagcc
      361 gaacctgacg gcgccggcgg ggctgacgat cgcgggcttt tgccccgacg ccgccgcgac
      421 gatcgttctg atcgcgcccg agggcgccgc attctggcgc cgctttaccc gatcggcaga
      481 atatgccgat ggcaggccgc atccgatgga tcgctggtcc aggcggatca tcggggcctg
      541 ggccgggcga ctggatgcgc aggcgatctt tccctctgac gggccgccct atccgcaatt
      601 cttcgcctgg gcgctggcca gcggtcgctg ctggtcatcg ccggtcggga tgctggtcca
      661 tgacgaagcc ggccttctca tcagctttcg cggcgcgctg cgggtgccgg gggggcttct
      721 gcccctgccc gctgccgcca ccagcccctg cgaggcctgc ccgcagccct gccgcgacgc
      781 ctgcccggcc ggggcattcg acgacggcta catcacggcc cgctgccacg attttctcga
      841 ccagccccaa gggcgcgact gcatgaccgg gggctgtcgt gtcagacgtg cttgcccgat
      901 cagcttgggc tgtggcaggc tgcgccagca atcggaatgg catatgaggc agttccaccc
      961 atgaccccac ttggacatcg acgactgatc ctcacccgcc atgcaaaatc ggcatgggac
     1021 gatccggctc tcagcgatca cgaccgcccg ctgaacgatc gtggccgccg ttcggcgcgc
     1081 gaactgggcg actggatggc aagccgcggc catgagccgg aagaggtcct gtgttcgtcg
     1141 tcgcaacgca cgaaggaaac ctgggccatg gtcgagggcg ccccgctgga ggtgcggccg
     1201 ctgctgcgga tagaacccgg cctttatcat gccagcccgg acaagatgtt gacgatcctg
     1261 cgcacggcca gccatcccac ggtgatgatg ctgggccata atcccggcat cgcggaactg
     1321 gccgcgctgc tgcccgcgcg gccgccgatg gacccggatt tccgccgcta tccgacctgc
     1381 gccactctgg tcgtcgattt ccagatcgac acatggtcac aggccgaacc cggtcagggc
     1441 agcgtcatgg atttcgtccg cttcgacggc cgggcctgac cgcgggcaga gcctttctga
     1501 ccgttcgatc atcttgccgg ccgggcaggt tgcctctggc cgcccgcgac ccagactgcc
     1561 tatcgggccg cgatcaatgc cccaggatct ggctcaggaa cagcttggtc cgctcggagc
     1621 gcggattgtt gaagaaatcg tggggattgt tctgctcgac gatctggccc tgatccatga
     1681 agatca
//
LOCUS       DTVW01000733            1882 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1899595, whole
            genome shotgun sequence.
ACCESSION   DTVW01000733 DTVW01000000
VERSION     DTVW01000733.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1882)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1882)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1882
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1899595"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            75..833
                     /locus_tag="EYO87_09690"
     CDS             75..833
                     /locus_tag="EYO87_09690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008228993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HIC66249.1"
                     /translation="MQQEGWQVVATCRKPGDISARQAEGMECHHLELADPDSVRALVA
                     DVLSGGPVDALVNNAAFALPGAVEDMPRGALSAIFETNLFGTHDLSVRLIPHFRRRGV
                     GRIVNISSVLGLIGIPWRGPYVATKFALEGLTDVLRLEMQGTGIRVILIEPGPIASRI
                     RENAIPHFERWVNWQDSPRADQYRASLLKRLYEPAGKDRFELPPSAVSDRIVHALTSD
                     RPRPRYYVTTPTWISGVGRRLMPTRALDWFARRG"
     gene            861..1061
                     /locus_tag="EYO87_09695"
     CDS             861..1061
                     /locus_tag="EYO87_09695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin transmembrane helix small protein"
                     /protein_id="HIC66250.1"
                     /translation="MRDGPLFYIVVLAMLVVLGILATGIGGFARGGEFNRKHGNRLMR
                     WRIIGQAIAVALILLFIWLRSR"
     gene            1061..1633
                     /locus_tag="EYO87_09700"
     CDS             1061..1633
                     /locus_tag="EYO87_09700"
                     /EC_number="2.5.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cob(I)yrinic acid a,c-diamide
                     adenosyltransferase"
                     /protein_id="HIC66251.1"
                     /translation="MVVLNRIYTRTGDKGETALSDGSRVAKHDARVAAYGTVDELNAT
                     LGLCRLHAADGMADRLAMIQNDLFDLGADLSRPDIGADDQADHPVLRIIDAQVARLET
                     EIDDMNDDLQPLRSFILPGGSALAAHLHLSRTVARRAERCATALAATGDANPAAIRYL
                     NRLSDWLFVAARQANGGGTEDILWVPGASR"
     gene            1760..>1882
                     /locus_tag="EYO87_09705"
     CDS             1760..>1882
                     /locus_tag="EYO87_09705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011046470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit beta/FixA
                     family protein"
                     /protein_id="HIC66252.1"
                     /translation="MKVLVPVKRVIDYNVKARVKADGSGVDLANVKMSMNPFDEI"
BASE COUNT          326 a          631 c          621 g          304 t
ORIGIN      
        1 ccgttgccag cgtcagagaa caactggctg ttcgggtcac acaactgcat cacggtctgg
       61 atgccgcgcg tcggatgcag caggaaggct ggcaggtcgt ggccacctgc cgcaaacccg
      121 gcgacatcag cgcccgccag gccgaaggga tggaatgcca ccacctggaa ctggcggatc
      181 cggacagcgt ccgggcgctg gtcgcggacg tgctgtcggg cggcccagtg gacgcgcttg
      241 tcaacaacgc cgccttcgcc ctgcccggcg cggtcgagga catgccgcgc ggcgccctga
      301 gcgcgatctt cgagacaaac ctgttcggca cccacgatct gagcgttcgc ctgatccccc
      361 atttccgccg gcgcggcgtc gggcggatcg tcaatatcag ttccgtcctc gggctgatcg
      421 gcattccctg gcgcggcccc tatgtagcga cgaaattcgc gctggagggc ctgaccgacg
      481 tgctgcggct ggaaatgcag ggcaccggca tccgcgtgat cctgatcgag cccggcccga
      541 tcgccagccg catccgcgaa aacgccatcc cccatttcga gcgttgggtg aactggcagg
      601 acagcccccg cgccgatcaa taccgcgcaa gcctgctcaa gcggctctat gaacccgcgg
      661 gcaaggatcg gttcgaattg ccgccctcgg cggtcagcga caggatcgtc catgcgctga
      721 cctcggacag gccgcgcccg cgctactatg tcacgacgcc gacatggatc tcgggcgtcg
      781 ggcggcggct gatgcccacg cgggctctgg actggtttgc ccgccggggc tagggtcgcg
      841 cccgaaaggt ggacaagctc atgcgggacg gacctctctt ctatatcgtg gtgctggcga
      901 tgctggtggt gctgggcatc ctcgccaccg ggatcggcgg tttcgcgcgc ggcggcgaat
      961 tcaaccgcaa gcacggcaat cgcctgatgc gatggcggat catcggccag gcgatcgccg
     1021 ttgccctgat cctgctgttc atctggctga ggtcgcgctg atggttgtcc tgaaccggat
     1081 ctacacccgc accggcgaca agggcgaaac cgccctgtcc gatggcagca gggtggcaaa
     1141 acatgacgcc cgcgtcgccg cctacggcac cgtggacgaa ctgaacgcga ccctgggcct
     1201 gtgccgcctg cacgcggccg atggcatggc cgaccgtctg gccatgatcc agaacgacct
     1261 gttcgatctg ggcgcggacc tgtcgcggcc ggatatcggg gcggacgatc aggcggatca
     1321 tcccgtgctg cggatcatcg acgcgcaggt cgcgcgcctc gaaaccgaga tcgacgacat
     1381 gaacgacgat ctgcaaccct tgcgcagctt catcctgccg ggcggttccg cccttgcggc
     1441 gcatctgcac ctgtcgcgca ccgtggcccg ccgcgcggaa cgctgcgcga ccgccctggc
     1501 ggcgacgggc gatgccaatc cggcggccat ccgctacctg aaccgcctgt cggactggct
     1561 gttcgtcgcc gcccgtcagg ccaatggcgg cggaaccgag gatatcctgt gggttccggg
     1621 cgccagcaga tagacaccgc ccgacgatac aagtcgggcg caaacgcagc gtcggaagcc
     1681 gtttttcggc tgttcccggg cgggaccagc cgctaacact tggccccgac gaaggacgca
     1741 accaagggag agcagccaca tgaaggttct cgtgccggtg aagcgggtga tcgactacaa
     1801 cgtcaaggcc cgtgtgaaag ccgatggatc cggggtcgat ctggccaatg tgaagatgtc
     1861 gatgaacccc ttcgacgaga tc
//
LOCUS       DTVW01000734            2068 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1900672, whole
            genome shotgun sequence.
ACCESSION   DTVW01000734 DTVW01000000
VERSION     DTVW01000734.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2068)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2068)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2068
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1900672"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..590)
                     /locus_tag="EYO87_09710"
     CDS             complement(<1..590)
                     /locus_tag="EYO87_09710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66253.1"
                     /translation="MTPTAKSIVHTIAFYDAVGGVPLTKIELYKRLIPAESLDAIAFS
                     DFLKILDGEWDGPAGLSAYIARKRGFYFLKKNSRGYAKRINEGKTGIKKWRIAKRMAR
                     LISFLPHVRMVAVTGSLALYTTNKNSDIDMLIAARGGHIWTTRVFVSMLTHLLGKRRH
                     GKLIRDRICLNHYISDKNLLLQPEHLFSAHICSSFIP"
     gene            complement(587..1816)
                     /locus_tag="EYO87_09715"
     CDS             complement(587..1816)
                     /locus_tag="EYO87_09715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66254.1"
                     /translation="MKKSDILPIEPSPAAKEKISQIPPKKSIPLGGTGAPPPNLPTGE
                     PSLARPDPTVEMVTPEKSAPPAEMPAPLPPKEDVKPEAKPPITPEEILGIAPKKAILP
                     PEPPKPPELTKPPISPLEKTVKPSKEQPPKPASRIRLKTPPSGRAGLPAPKFILITGA
                     LGFALIALGYGVVTEILLQETVTAPPQTLEITEPPLPDTLIETTQIKPIKITNISYGA
                     LKSKIDALQEKRFLAGSLAHIPIKLSSESEIRYLTLVEIFAALQIDAPPILNDYKNFT
                     LFLYSQDTKAEELCTSAGIADKSCYGPRIGIIIEMPDPGESALTISTASNVMEEWEKT
                     IVDDLRPLMLAAPQGTVDVQGEKISAFSFGKHKTFVTHYINLPIPTTSVDWLIADSYL
                     VIATSKDAARAAADNLK"
BASE COUNT          422 a          456 c          587 g          603 t
ORIGIN      
        1 gggataaaag acgagcaaat atgagcggaa aaaagatgtt cgggctgcaa taggagattt
       61 ttgtctgata tgtagtggtt caagcatatt ctgtcgcgga taagttttcc atgccgcctt
      121 tttccaagaa ggtgcgtaag catgcttaca aatacgcgcg tggtccatat atgccctccc
      181 cttgcggcga taagcatatc aatgtcgctg ttcttgttgg tcgtatatag cgcgagggat
      241 ccggtcacag ccaccatgcg tacgtgaggc aaaaacgata ttaggcgcgc cattcttttt
      301 gcgatgcgcc atttttttat accggtcttg ccttcattta tcctttttgc gtagccgcgg
      361 ctattttttt ttagaaaata aaagcccctt ttgcgggcta tataggccga cagtccggct
      421 ggtccgtccc attctccgtc aagtattttt agaaaatcac taaacgctat cgcatctaac
      481 gattctgcgg gaataaggcg tttgtagagt tcaatttttg tcaggggtac gccgcctaca
      541 gcatcgtaaa aagcaatagt atggactatg gatttggctg tgggggtcat tttagattat
      601 ctgctgccgc ccttgcggca tctttagatg tggctatgac aagatatgaa tcggcaatca
      661 gccaatctac agacgtcgtg ggtatcggaa gatttatata gtgggtaaca aaagttttgt
      721 gttttccaaa agaaaatgcg cttatttttt cgccctggac atcaacggtc ccttggggag
      781 ccgcaagcat tagcgggcgt aagtcatcta caatcgtttt ttcccattcc tccatgacat
      841 tagaggcggt gcttatcgta agtgcgcttt ccccggggtc gggcatctct attattatgc
      901 cgattctggg tccgtagcag gatttgtccg caatcccggc acttgtgcag agttcttctg
      961 cttttgtatc ctgggaatac aggaagaggg tgaaattttt gtagtcattc agtattggcg
     1021 gcgcgtcaat ttggagcgcg gcaaaaattt ctactagggt aagatagcgt atctcgcttt
     1081 cggatgagag ttttatgggg atatgcgcca atgacccggc gaggaaccgt ttttcctgca
     1141 gagcgtctat ttttgactta agagcgccgt agctgatatt tgtaatttta ataggtttta
     1201 tttgagtagt ctcaatgagc gtatccggca acgggggctc ggttatttca agggtttggg
     1261 ggggcgcggt aacggtctcc tgcagaagga tttctgtgac tactccatag cccaaagcaa
     1321 tgagcgcgaa gcccaaagcg ccggtaataa gtatgaattt aggagcagga agacctgccc
     1381 gcccgcttgg cggggtcttt aatcttatgc gagaagccgg ctttgggggc tgttccttgg
     1441 aaggttttac tgttttttca aggggactga tggggggctt ggtcaattcg ggcggcttgg
     1501 gcggttcagg tggcaggatt gctttcttgg gggcaatgcc caaaatttct tccggagtta
     1561 ttgggggttt ggcttccggc ttaacgtctt ccttcggggg caggggagcg ggcatctctg
     1621 ccggcggggc agatttttcg ggagttacca tctccacagt tggatcgggg cgggcaagtg
     1681 acggctcgcc tgtaggcaaa ttaggcggag gtgcgcctgt tcctcccaaa ggaatacttt
     1741 tcttaggggg tatctgcgag attttttctt tcgctgccgg tgagggctct atcggcagaa
     1801 tatccgattt cttcatatcc tcaatcttta tgcgctgcgg gggctcgggg cttggttttg
     1861 tctcgggttt tgccgagtcg gactcagccg catccacgcg gcgtcgggca tctgccagta
     1921 tttgcgaaag tgtgcgctgt ttttctttgc tttcatctgg cgagtcgggc tcgcctcgct
     1981 ctagctttgg caaagcgggc cggcgtgagg gaattggcgg cggctcaatc cgcggtcttg
     2041 cctcgtcccc taccgtctga tgcgggac
//
LOCUS       DTVW01000735            1103 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1900896, whole
            genome shotgun sequence.
ACCESSION   DTVW01000735 DTVW01000000
VERSION     DTVW01000735.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1103)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1103)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1103
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1900896"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..709
                     /locus_tag="EYO87_09720"
     CDS             <1..709
                     /locus_tag="EYO87_09720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011749220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="carbohydrate kinase"
                     /protein_id="HIC66255.1"
                     /translation="DRLTTLALVTLIGGDAHYAFYDEGSAGRMLAPEDIPALPADIEA
                     IFVGGISLVPDPCGAAIEALVAANHHDLPVMIDPNIRPFFIQDAAAFRDRLSRLLPLA
                     DIVKLSSDDLEWLHPGLSSEDAAREVLRGGTGIVLQTGGASGARAFWAGETVSAPAVR
                     TNVADTIGAGDTFNAGVLASLRRQGVLTKQGLASIGPGQIRGALSLGAQAAAITVSRA
                     GANPPWAHEMPAEVTYP"
     gene            complement(858..>1103)
                     /locus_tag="EYO87_09725"
     CDS             complement(858..>1103)
                     /locus_tag="EYO87_09725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011908147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside triphosphate pyrophosphohydrolase"
                     /protein_id="HIC66256.1"
                     /translation="GAMEEEFGDLLFVMANLARHLKIDPERALRRANAKFTRRFRAIE
                     AALAAEGRRPEDSDLAEMDRLWNRAKLAEKSGRVIGG"
BASE COUNT          157 a          390 c          363 g          193 t
ORIGIN      
        1 cgaccggctg acgacgctgg cgctggtcac gctgatcggc ggcgatgcgc attacgcctt
       61 ctacgatgag ggttccgccg gccggatgct ggcgcccgaa gacattcccg ccctgcccgc
      121 cgatatcgag gcgatcttcg tgggcgggat cagccttgtt cccgatccct gcggcgccgc
      181 gatcgaggcg ctggtggcgg ccaatcacca cgatctgccg gtgatgatcg acccgaatat
      241 ccgcccgttc ttcatccagg atgcggctgc ctttcgcgat cgcctgtccc gcctgctgcc
      301 cctcgccgat atcgtgaaat tgtcctcgga tgatctggaa tggcttcatc ccggcctttc
      361 gtccgaagat gccgcgcgcg aggttctgcg aggcggaacc ggcatcgtgc tgcaaaccgg
      421 cggcgcttcg ggggcgcgcg ctttctgggc cggcgagacc gtcagtgccc cggccgtgcg
      481 caccaatgtc gccgacacga tcggcgcggg cgacactttc aacgcgggcg ttctggccag
      541 cctgcgccgc cagggtgtgc tgacgaagca gggcctggca tcgatcggcc ccggccagat
      601 ccgcggcgcg ctgagccttg gcgcgcaggc cgccgcgatc accgtctcgc gcgccggcgc
      661 gaatccgccc tgggcacatg aaatgcctgc cgaggtcacc tacccctagc cggggcttgc
      721 gatgcccgac ggctcacgcg ccgtttccgc caagggcaga agcggcgcgt cgcgcatttt
      781 catctgacgg ctttcgggcg atccccgttc ccgccgttcc ccatcttcgc gcggcggcag
      841 agccgatcgc ggaaagatca gccgccaatc acgcggccag acttctcggc aagcttggcg
      901 cggttccaga gccggtccat ctcggccaga tcgctgtcct cggggcggcg gccctcggcg
      961 gccagggcgg cctcgatggc gcggaaacgg cgggtgaatt tcgcattggc gcggcgcagg
     1021 gcccgttcgg ggtcgatctt cagatgccgc gccagattgg ccatgacgaa cagaagatcg
     1081 ccgaattctt cctccatcgc ccc
//
LOCUS       DTVW01000736            1023 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1900981, whole
            genome shotgun sequence.
ACCESSION   DTVW01000736 DTVW01000000
VERSION     DTVW01000736.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1023)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1023)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1023
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1900981"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..195)
                     /locus_tag="EYO87_09730"
     CDS             complement(<1..195)
                     /locus_tag="EYO87_09730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66257.1"
                     /translation="MRKKQTLPGPVHVLLTGKPEESDRRLVIEQSPGYGIVGKEVTVR
                     YRVEDRLGQKAVSFADRLADV"
     gene            535..780
                     /locus_tag="EYO87_09735"
                     /pseudo
     CDS             535..780
                     /locus_tag="EYO87_09735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009524087.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase/fumarate reductase
                     iron-sulfur subunit"
     gene            657..>1023
                     /locus_tag="EYO87_09740"
     CDS             657..>1023
                     /locus_tag="EYO87_09740"
                     /inference="COORDINATES: protein motif:HMM:PF01127.20"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66258.1"
                     /translation="MPGLPFPAGLPGTLSQIPEPDGGHRRAETRRCGGGAEGQAVSAE
                     AIQTRVWLAQRLSAVVLAVAVTVHLVGIIVAVQGGLSAAEIIARVGGSAVMAVFYGVF
                     VIACAVHAPIGLRTVLLEMT"
BASE COUNT          156 a          347 c          343 g          177 t
ORIGIN      
        1 cacgtcggcc agccggtcgg caaacgatac ggccttctgc ccgagacgat cctcgacccg
       61 gtagcggacc gtcacctcct tgccgacgat gccgtaaccg ggggactgtt cgatcaccag
      121 acggcggtcc gattcctccg gctttccggt caacaggaca tggacgggcc ccggcagagt
      181 ctgcttttta cgcacgtccg gaacgtcatg aatctggccg tccgtaatca gcaccgcgcc
      241 agcaaaccgc tgacggggaa tttccgccgt ctcccgcgcc agggcggcaa acaggcgggt
      301 gcctccatcc ttttcggcgt ccttgccggc gtttttgggg ttgctttccg gaccatccgc
      361 aacctcgatg gtgcgaacat cgagatcatc gaaccgggac agctgttcgc ggaccgaggc
      421 cagggcggca tcggtttcgg cgcgccggtt gccgacctcc tggctggccg aacggtccag
      481 ggctatgacg gcaatgtcac gctggcgctg acgttcctca cgcaccgcct gggggtggtc
      541 gcgtggaaac ccgattacct ggggccggcg gcgctcaacc gcgcctggac gctggtcaac
      601 gacgcccgcg acgggctcgg cgacaagcgc ctggccctgg tcgccggcga caacgggtgc
      661 ctgggctgcc attcccagca gggctgccgg gaacactgtc ccaaatccct gaacccgacg
      721 gcggccatcg ccgggctgaa acgcgccgtt gcggcggcgg cgctgaaggg caagctgtga
      781 gcgccgaagc aatccagacc cgggtgtggc tggcgcagcg gctcagcgcc gtggtactgg
      841 ccgtcgccgt gaccgtgcat ctggtcggca tcatcgtcgc cgtgcagggc ggcctttcgg
      901 cggccgaaat catcgcccgc gtcggcggca gcgcagtgat ggcggtgttt tacggcgtct
      961 tcgtcatcgc ttgcgccgtg catgcgccga tcggcctgcg caccgttctg ctggaaatga
     1021 cgg
//
LOCUS       DTVW01000737            2527 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1901851, whole
            genome shotgun sequence.
ACCESSION   DTVW01000737 DTVW01000000
VERSION     DTVW01000737.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2527)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2527)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2527
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1901851"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..570)
                     /locus_tag="EYO87_09745"
     CDS             complement(<1..570)
                     /locus_tag="EYO87_09745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_879322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HIC66259.1"
                     /translation="MNIAARNPDSVIDGVFIDNEWRPSASGETLPVIDPATGEAFSRI
                     ASGNAADIDTAVAAARRARNGAWGALSATERGRILSRAAALVAGAAGDLAALEARDTG
                     KPISQARADIAATARYLEFYGGAADKLHGDTIPFLPGHFVTTEYVPFGVTGHIIPWNY
                     PAQMFGRTIAAALAMGNACVLKPAEDACLT"
     gene            complement(631..1218)
                     /locus_tag="EYO87_09750"
     CDS             complement(631..1218)
                     /locus_tag="EYO87_09750"
                     /EC_number="2.7.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_355095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(d)CMP kinase"
                     /protein_id="HIC66260.1"
                     /translation="MAFIIAIDGPAASGKGTIGRALAADLGFHHLDTGLLYRATGVKG
                     GDPVAAARGLVAADLARDDLRSAEAGQAASRVAAIPEVRAALIDFQRRFAMREPGAVL
                     DGRDIGTVICPQADLKLYVVASDQVRAMRRASELGADPAEMLAQLQERDRRDSQRASA
                     PLRPADDAVVLDTTDLTIEQAVAAALSAVGRRRAT"
     gene            1415..2179
                     /locus_tag="EYO87_09755"
     CDS             1415..2179
                     /locus_tag="EYO87_09755"
                     /inference="COORDINATES: protein motif:HMM:PF03472.13"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66261.1"
                     /translation="MSINYLDRVANARSVPEASDAYLSALREHGFQHGLYIARFLLSL
                     PAAVLREEPILFGNFPDGFVARLGAGGLLATAPWAVWALQNSGNASLRDACLGHEDGA
                     AEIHPAIRLAMDHGVEAGRVISLRNRVPRSHGAVLLCPGGGISHERAETAWQSARGEI
                     GILTSVLHLRLATLGRRLVETRLTQRQREVLEWSSAGKTVAEIGTILGVAAATVEKHL
                     RLARQAIGADTTAHAILRAHLAHQIFPHGQDLNPFT"
BASE COUNT          396 a          840 c          851 g          440 t
ORIGIN      
        1 cgtcaggcag gcatcctcgg ccggtttcag cacgcaggca ttgcccatcg ccagcgcagc
       61 ggcgatggtg cggccgaaca tctgcgccgg ataattccat gggatgatat gtccggtcac
      121 gccgaagggc acgtattcgg tggtcacgaa atggccgggc aggaagggaa tcgtgtcgcc
      181 atgcaacttg tccgccgcgc cgccgtaaaa ttccagataa cgtgccgtcg ccgcgatatc
      241 ggcgcgcgcc tgcgagatgg gtttgccggt atcgcgcgcc tccagcgccg ccagatcccc
      301 ggccgccccg gcaaccaggg cggcggcgcg cgacaggatg cggccgcgct cggtcgcgct
      361 caacgcgccc catgcgccat tgcgcgcacg tcgcgcggcg gcgacggcgg tgtcgatatc
      421 ggccgcattg cccgaggcga tgcggctgaa tgcctcgccg gtggcggggt cgatcaccgg
      481 cagcgtctcg ccgctggccg aggggcgcca ttcgttgtct atgaacacac cgtcgatgac
      541 ggaatcggga ttgcgcgcgg cgatgttcat cggaccctcc tcgtgatgcc cggggatcct
      601 tgcgcatcgc ggcgcggcgc gcaagcgggg ctaggtggcg cgacgccggc cgacggctga
      661 cagagccgcg gcgaccgcct gttcgatggt cagatcggtc gtgtccagca ccaccgcgtc
      721 atcggccggc cgcagcggtg cgctggcgcg ctggctgtca cggcggtcgc gttcctgcaa
      781 ctgggccagc atctcggccg ggtcggcgcc cagttcggac gcccggcgca tggcccgcac
      841 ctggtccgag gcgacgacat acaatttcag atccgcctgc gggcagatca ccgtgccgat
      901 atcgcgcccg tccagcaccg cgccgggttc gcgcatcgcg aagcggcgct ggaaatcgat
      961 cagggccgcg cggacctcgg ggatcgccgc gacgcggctg gcggcctgac cggcctcggc
     1021 gctgcgcaga tcgtcgcgtg ccagatccgc tgcgaccagc ccgcgggccg ctgcgaccgg
     1081 atcgccgccc ttcaccccgg tcgcccggta gagcagcccg gtatcaagat gatgaaagcc
     1141 cagatcggcg gccagcgccc gcccgatcgt ccccttcccc gaggccgccg gcccgtcgat
     1201 cgcaatgatg aacgccatgt ccccggcctg ccgttttacc cgtcaccgcc tctttgcata
     1261 tccgcgcggc aaaggtccag ccggcagcag aggtcgcgga acggcccttg tcggaccggc
     1321 aagagggcgg tcgggcgggc gaattcttct tggcatcacc gtgattctgc atttctatcg
     1381 ccgaaatgaa gaatttattt cggtttagtg atttatgtcg atcaattatc ttgatcgtgt
     1441 cgccaatgcc cgatcggtgc ccgaggcaag cgatgcctat ctttcggctt tgcgcgaaca
     1501 cggttttcaa cacggtctct atatcgcgcg cttcctgctg tcgcttcccg ccgccgtgct
     1561 gcgtgaagag ccgatcctgt tcggcaattt ccccgacggc tttgtcgcac ggctaggcgc
     1621 cggggggctg ctggccaccg cgccctgggc ggtctgggcg ctgcagaatt ccggcaatgc
     1681 ctcgttgcgg gatgcgtgcc tggggcatga agacggggcc gcggaaatcc accctgcgat
     1741 ccgtctggcg atggatcacg gcgtcgaggc gggtcgagtc atcagcctca ggaacagggt
     1801 gccgcgcagt catggcgcgg tattgctgtg ccctggcggc gggatcagcc acgagcgcgc
     1861 cgaaacggcc tggcaatccg cgcgcggcga gatcgggatt ctgacctcgg tcctgcatct
     1921 tcggctggcg acgctgggcc ggcggctggt cgaaacccgc ctgacgcagc gtcagcgcga
     1981 ggttctggaa tggagttcgg ccggaaagac ggtggccgag atcggcacga tcctgggcgt
     2041 agcggccgcc acggtcgaaa aacatctgcg tctggcgcgg caggcgatcg gggccgatac
     2101 gaccgcccac gccatcctcc gcgcccatct ggcccaccag attttcccgc acggccaaga
     2161 cctgaacccg ttcacgtgag gataggccaa taggggtagg gtttgcctga ctttctcttt
     2221 gcggcaaatc ggccttgaat cgtgacgttc cgtgagtggt gacacagaat gtgtcaggaa
     2281 cctgcgcaag ggtccgagtg ttgcccgggc cgcgcatccc gtcagaaacg gggggcatct
     2341 gccgatggcg gtcttgtcgt cgtcggcgga tgtcgcgcgt tcccggccga tgtcgcaaaa
     2401 cgacgaaaga cgccggccat cgctgaccgg cgtcttcgca gaaaacggca gggaacggat
     2461 caggcgccgc ccagggtctt ggcgacctcg gccgcgaaat cctcttcctt cttctcgatg
     2521 ccttcgc
//
LOCUS       DTVW01000738            1828 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1901991, whole
            genome shotgun sequence.
ACCESSION   DTVW01000738 DTVW01000000
VERSION     DTVW01000738.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1828)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1828)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1828
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1901991"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(138..584)
                     /locus_tag="EYO87_09760"
     CDS             complement(138..584)
                     /locus_tag="EYO87_09760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011910623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase"
                     /protein_id="HIC66262.1"
                     /translation="MTLSHHTVDPARVVAVARSWLGTPYHDQASLRGVGCDCLGLARG
                     VWREVVGPEPFPIPPYSRDWGETGPREVLADGARRMMPELDPSESGPGTLILFRMMPR
                     AIAKHVGILTGPDTFLHAYERLGVIEEPLTPTWARKIAFAFLFPAR"
     gene            complement(581..1465)
                     /locus_tag="EYO87_09765"
     CDS             complement(581..1465)
                     /locus_tag="EYO87_09765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2163 domain-containing protein"
                     /protein_id="HIC66263.1"
                     /translation="MKSLPPALQTHLDEGATTLAWCWRITRVDGVTFGFTDHDRTLSF
                     DGTDFEPESGLTASEVRSGSDLSVDAQDAQGVLSSDRITETDILDGRWDNAAVEVWRV
                     NWSGPAQRVLLRRGAIGQIRRGRLAFLAEVRSLAHVLGQTVGRTFQASCDAALGDARC
                     GVNLEAPAFKGTGAIINLLRDRAFTASGLGSFAAGWFAFGLVEWSTGANAGRRVEVVS
                     HDLVDGVAILTLLEAPVRPITATDAFVVRAGCDKRIATCSAKFTNVANFRGFPHIPGQ
                     DAVLRYATKDGGHEGAVL"
     gene            complement(1462..1671)
                     /locus_tag="EYO87_09770"
     CDS             complement(1462..1671)
                     /locus_tag="EYO87_09770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66264.1"
                     /translation="MNWTLARGLVYLACLAASGLAVAGLADFDIATGTLDIRPFNLYA
                     LTGATGGVVSSLLASVALLRGWGRK"
BASE COUNT          327 a          601 c          654 g          246 t
ORIGIN      
        1 agccgatgaa gccgccgatg gcggccccag aaaagccgag gatcgcaccg ccgaaggccc
       61 cgccaatggc ggagccgaca gcgccgagga cgagcgtggc cattgcggaa actcaaggtt
      121 cgaagggttg gggggagtca gcgtgccgga aacaggaagg cgaaggcgat cttgcgcgcc
      181 caagtcggtg tcagcggttc ctcgatcacg cccagtcgct cataggcgtg gaggaaggtg
      241 tcggggccgg tgaggatccc gacatgcttg gcgatggcgc ggggcatcat ccggaacagg
      301 atcagcgtac cgggcccgga ctcggatgga tcaagttccg gcatcatccg tctcgctccg
      361 tcagccagca cttcgcgcgg gccggtctcg ccccagtcgc ggctgtaggg cgggatcggg
      421 aacggctccg gccccacgac ctcgcgccag acgccccgtg cgaggccgag acaatcgcag
      481 ccgaccccgc gcaagctggc ctggtcgtga tagggcgtgc cgagccatga ccgcgcgacg
      541 gcgacgacgc gggccggatc gaccgtatgg tgtgataggg tcaaagcacc gccccctcat
      601 ggccgccgtc cttcgtggca tagcgcagca cggcatcctg gccggggatg tgcgggaagc
      661 cccggaagtt ggcgacattg gtgaacttcg cgctgcaggt cgcgatccgc ttgtcgcagc
      721 ccgcccggac cacgaaagca tccgtcgccg tgatcggacg caccggcgct tccagcaggg
      781 tcaggatcgc caccccgtcg acgaggtcgt gcgacaccac ctcgacccgc cgcccggcat
      841 tcgcgccggt cgaccattcc accagtccga aggcaaacca gcccgccgca aaggagccaa
      901 ggccggaagc ggtgaaggcc cggtcgcgca gcaaattgat gatcgcgccg gtccccttga
      961 aggccggggc ctcaaggttc acgccgcagc gcgcatcgcc cagcgcggcg tcgcagcttg
     1021 cctggaacgt tcgcccgact gtctggccga ggacatgggc aaggctgcgc acctcggcca
     1081 agaaggccag ccgcccacgc cggatctggc cgatagcccc gcggcgcaga agaacgcgct
     1141 gcgccgggcc cgaccagttc acgcgccaga cctcgacagc cgcattgtcc caccggccgt
     1201 cgaggatgtc ggtctcggtg atccggtccg acgacagcac gccttgggca tcctgcgcat
     1261 cgaccgacag gtcggagccg gatcggactt cggacgccgt cagcccactt tccggttcga
     1321 agtcggtccc gtcgaacgac agcgtccggt cgtggtccgt gaagccgaag gtcacgccgt
     1381 ccacccgggt gatgcgccag caccaggcga gcgtcgtcgc cccctcgtcg agatgggttt
     1441 gcagcgcggg cgggagggat ttcatttccg cccccagccg cgcaggagcg ccacggacgc
     1501 gaggagcgaa gacacgacgc ctccggtcgc gccggtcagg gcatagagat tgaaggggcg
     1561 aatatcgagc gtgccggtgg caatgtcgaa atccgcgagc cccgccacgg cgaggccgga
     1621 ggcggcaagg caggccagat agacgaggcc gcgtgcgagg gtccagttca tggtcatgct
     1681 ccgatcaggg tcttgaggaa ggtgaaaatg cgggtggtca ggctcgccgc tgcctgcacg
     1741 ggcgaggggt cggtggcggc cgtggaaggg gcgggtgagg tggggatcga ctgtgaaatg
     1801 aggggcgggc gcagcaaggc cagcgcct
//
LOCUS       DTVW01000739            1255 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1904803, whole
            genome shotgun sequence.
ACCESSION   DTVW01000739 DTVW01000000
VERSION     DTVW01000739.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1255)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1255)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1255
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1904803"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..129)
                     /locus_tag="EYO87_09775"
     CDS             complement(<1..129)
                     /locus_tag="EYO87_09775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptG"
                     /protein_id="HIC66265.1"
                     /translation="MILARYVARRFLRGLLLIAGAFLLILLLIDMIEMIRRFSGRDI"
     gene            complement(126..>1255)
                     /gene="lptF"
                     /locus_tag="EYO87_09780"
     CDS             complement(126..>1255)
                     /gene="lptF"
                     /locus_tag="EYO87_09780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010396818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptF"
                     /protein_id="HIC66266.1"
                     /translation="DRYILSQLLTLFGFFALVLVSVYWVNRAVNLFDQLLNDGQTALV
                     VLEFTALTLPLVISIVLPVAAFAAAAYGTNRMSGESEMVAMQAAGLSPWRLARPVLIF
                     GVFVGLMVAVLVHGLVPAARARLAERQAELAENVTGQFLRPGIFQYPADGVTLFIRDI
                     ASDGRLLDLFIEDARDPADQKIYTSEEALVVRATTGPVLVLLSGMVQNLQVRDQNRRL
                     SLTRFDEFRYDIGSLFQNRARSGRDLRDYGTWRLLNPDAALLQATGASAAESLREAHE
                     RIAKPLLSPVAAMIGFATLLIGGYSRFGVWRQVFWAILYLIAVQFLGNAAADQAGRDP
                     RLWPVLYVPALAGAAISVALLWLAARPRRLRGPARAAGAAP"
BASE COUNT          261 a          439 c          403 g          152 t
ORIGIN      
        1 gatatcgcgc ccggaaaagc ggcggatcat ctcgatcatg tcgatcagca gcaggatcag
       61 caggaacgca cccgcgatca gcagaagccc gcgcagaaaa cgccgggcga catagcgcgc
      121 aaggatcatg gcgccgcccc cgccgcgcgt gcgggcccac gtaatcgccg gggtcgcgcc
      181 gccagccaca acagcgcgac cgagatcgcc gccccggcca gggcgggcac atacagaacc
      241 ggccagagcc gcgggtcgcg cccggcctga tcggccgcgg cattgcccag gaactgaacc
      301 gcgatcaggt acaggatcgc ccagaagacc tgccgccaga ccccgaatcg cgaatatccg
      361 ccgatcagca gcgtggcaaa gccgatcatc gccgcgaccg gcgacagcaa cggcttggcg
      421 atccgttcat gcgcctcgcg cagcgattcg gcggcgctgg ccccggtcgc ctgcaacagc
      481 gccgcatcgg ggttcagcag ccgccaggtg ccgtagtcgc gcagatcgcg accgctgcgg
      541 gcgcggttct ggaaaaggct gccgatgtca tagcgaaatt cgtcaaagcg cgtcagcgac
      601 agccgccggt tctggtcccg gacctgcagg ttctggacca tgcccgacag cagcaccagc
      661 acaggcccgg tcgtggccct gacgaccagc gcctcctccg aggtatagat cttctggtcg
      721 gcgggatcgc gcgcatcctc gatgaacagg tccagcaggc ggccgtcgct ggcaatgtcg
      781 cggatgaaca gcgtcacccc gtcggccgga tactgaaaga tccccggacg caggaattgg
      841 ccggtgacat tctcggccag ttcggcctgc cgctcggcca gccgcgcccg cgccgcgggc
      901 acgagaccgt gaaccagcac cgccaccatc aggcctacga agacgccgaa gatcaggacc
      961 ggacgcgcca gccgccaggg cgacaggccc gccgcctgca tcgccaccat ctcggactcg
     1021 cccgacatgc ggttggtgcc ataggccgcc gccgcgaaag ccgccaccgg cagcacgatc
     1081 gagatgacca gaggcagggt cagcgcggtg aattccagca cgacaagggc ggtctggcca
     1141 tcgttcagaa gctgatcgaa caggttgacc gcgcgattga cccaatagac cgaaaccagc
     1201 accagggcga aaaagccgaa cagcgtcagc aactggctga ggatatagcg gtcga
//
LOCUS       DTVW01000740            1137 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1906770, whole
            genome shotgun sequence.
ACCESSION   DTVW01000740 DTVW01000000
VERSION     DTVW01000740.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1137)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1137)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1137
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1906770"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..859)
                     /locus_tag="EYO87_09785"
     CDS             complement(<1..859)
                     /locus_tag="EYO87_09785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009803549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
                     /protein_id="HIC66267.1"
                     /translation="MESMIHDMAERLFRDHVTHRMREDAASGQCPEALWTQIEEAGLT
                     MALVPEDAGGFGVPPAEALGLVRIVGAHGLPLPLAETLIANAVLAAANMALPGGRLTI
                     AEGEALRLERRGKKIHASGHLTLVPFARWANRIVTIGVLDGVDHVLSLPVKDLIVDPA
                     QDFAGMPRDDIELDYTLTETDVTPLPRPVGGMRGLGALIRSLATTGAMETILKMSVQY
                     ANDRVQFGRPIGRFQAIQHNLATMAGETAASRTAAEMAAGSYDTPAFALAVAAAKARA
                     GEAAEKVGAL"
     gene            complement(859..>1137)
                     /locus_tag="EYO87_09790"
     CDS             complement(859..>1137)
                     /locus_tag="EYO87_09790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009803548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmgE/PrpD family protein"
                     /protein_id="HIC66268.1"
                     /translation="AETSVAAHPGSPSDPATPAAIGDKIADCLGKYRRDGGAAPSASA
                     FRRDLRTRLHLPPLREASAPDGQKNHARQDKPVKEMSSADQTPSERTV"
BASE COUNT          178 a          374 c          371 g          214 t
ORIGIN      
        1 ccagggcccc gaccttctcg gccgcttctc cggcgcgggc cttggcggcg gcaacggcca
       61 gcgcaaaggc cggtgtgtca tagctgccgg ccgccatctc ggcggccgtg cgcgaggctg
      121 cggtttctcc ggccattgtc gcaagattgt gctggatcgc ctggaacctg ccgattggcc
      181 gtccgaactg cacccggtcg ttggcgtatt gaacgctcat cttcaggatg gtctccatcg
      241 ccccggtggt ggcaagactg cggataagtg caccaagccc gcgcatccct cccacgggtc
      301 gtggcaaggg ggtgacatcg gtctctgtca gggtataatc gagttcgatg tcgtcgcgtg
      361 gcatcccggc aaaatcctgc gccgggtcaa cgatcagatc cttcaccggc agggacagga
      421 cgtgatcgac accgtccagg acgccaatgg tcacgatccg gttcgcccag cgggcaaagg
      481 gcaccagtgt cagatgcccg ctcgcatgga tcttcttgcc gcgccgttcc aaccgcagcg
      541 cttcgccttc ggcgatggtc agcctgccac cgggaagggc catattcgcg gccgccagaa
      601 cggcgtttgc gatcagggtt tcagccagag gcaagggcag gccatgcgcc ccgacaatac
      661 gcacaagacc gagcgcctcg gccggtggca cgccgaaacc gcctgcgtcc tctggcacca
      721 gcgccatggt taaccctgcc tcctcgatct gcgtccagag cgcctcgggg cattgtcccg
      781 aggcggcgtc ttcgcgcatg cggtgggtga catggtcgcg gaacagtcgc tctgccatgt
      841 catgaatcat cgattccatc agacggtcct ttcagacggt gtttgatcgg cgctggacat
      901 ttccttcacg ggcttgtcct gccgcgcatg gtttttttgc ccgtcggggg ccgacgcctc
      961 tcgcagtggc ggcagatgca gccgcgtgcg cagatcccgg cggaacgcac tggcagaggg
     1021 cgccgcgccc ccgtccctgc gatattttcc gaggcaatcg gcgattttgt cgccgatcgc
     1081 ggcaggggtt gccggatccg agggagagcc ggggtgcgcc gcgaccgagg tttcggc
//
LOCUS       DTVW01000741            3211 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1909728, whole
            genome shotgun sequence.
ACCESSION   DTVW01000741 DTVW01000000
VERSION     DTVW01000741.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3211)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3211)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3211
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1909728"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..718
                     /locus_tag="EYO87_09795"
     CDS             <1..718
                     /locus_tag="EYO87_09795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018001279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="lipid II flippase MurJ"
                     /protein_id="HIC66269.1"
                     /translation="PLGVVGAAVAVVLLPELARRLRAGDHAGGQSAYSRATEFGLFLT
                     LPAAFAIAVIAQPMVAALFERGQFTAFDTAQTAKALVVYALGLPAFVLQKILQPLYFA
                     REDTRTPFRFALWSMVVNAAVAFGLMQPLGFIAAALGTTVAAWVMVAQLWWGTRAMGQ
                     AARADARLRRTAPRIVLASALMAMALWLIRDWLAASGMARIPGLAILVFGGAAIYFSL
                     AFLTRAYRLGDLGTAVRRGR"
     gene            complement(764..1465)
                     /locus_tag="EYO87_09800"
     CDS             complement(764..1465)
                     /locus_tag="EYO87_09800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011750187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HIC66270.1"
                     /translation="MREGLTESPLNPLPMAVWLLALPIIASEAVFGLGRIGLIGGAQG
                     VGLRLAGMQLSAYAPEMVQRMWDMGAIDWAQIYRLFSYSFVNASFTQSLFVLAFTLAL
                     GNLVARQFRPTALIMLFFGSAAGGALVYTVAMAALPGRAVPLIGGYPAVYGLVGAFTF
                     LLWARLAAANANRMRAFTLIGMLLLFQLVFGMVFGGTGYGWIAEIAGFAVGFGLSFLL
                     VDGGVARAIRQIRQR"
     gene            1553..2575
                     /gene="trpS"
                     /locus_tag="EYO87_09805"
     CDS             1553..2575
                     /gene="trpS"
                     /locus_tag="EYO87_09805"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018001281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HIC66271.1"
                     /translation="MNPGFTPRIFSGIQPSGGLTLGNYLGALKRFAALQGQGAETVYC
                     IVDLHAITVWQDPQMLRARIREAAAAFMASGVDPAQSILFNQSQVSAHAEMAWLFNTV
                     ARVGWMYRMTQFKDKAGKNSENASLGLLAYPALMAADILTYQATAVPVGEDQKQHLEL
                     TRDIAAKFNHDYGVGHFPITEPLIEGVATRVMSLRDGSRKMSKSDPSDASRINLTDDA
                     DTIAQKIRKARTDADPLPGAIDGLKDRPEARNLVNIYAALADETPDQVLARFEGQGFG
                     AFKPALADIAVSALSPITAKMTEYMDDPAEIDRILGDGALRADTVATPILEKTKQIMG
                     LLRSRP"
     gene            2674..2883
                     /locus_tag="EYO87_09810"
     CDS             2674..2883
                     /locus_tag="EYO87_09810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019053649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66272.1"
                     /translation="MDPAQFRVALPAADPPDNMNRQTGSRRGRFGGPARSWTDISCSH
                     SIPTNASGPAMSAPTCFRVWSSRWP"
     gene            2796..>3211
                     /locus_tag="EYO87_09815"
     CDS             2796..>3211
                     /locus_tag="EYO87_09815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001033889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SulP family inorganic anion transporter"
                     /protein_id="HIC66273.1"
                     /translation="MFSFDTYKRQWTGNVRADLLSGLVVALALIPEAIAFSIIAGVDP
                     KVGLYASFSIAVITAIAGGRPGMISAATAATAVLMVTLVRDHGLQYLLAATVLAGLIQ
                     IGCGALKLGFVMRYVSKSVMTGFVNALAILIFLAQLP"
BASE COUNT          551 a         1127 c         1000 g          533 t
ORIGIN      
        1 gcccctgggc gtcgtcggcg ccgccgtcgc cgtcgtcctg ctgcccgaac tggcccggcg
       61 cctgcgggcc ggcgaccacg ccggcggcca gtccgcctac agccgggcca ccgaattcgg
      121 cctgttcctg accctgcctg ccgccttcgc gatcgccgtc atcgcccagc cgatggtggc
      181 ggccctgttc gagcgtggcc agttcaccgc attcgacacc gcgcagaccg cgaaggcgct
      241 ggtcgtctat gcgctcggcc tgcctgcctt cgtgctgcag aaaatcctgc aaccgctgta
      301 tttcgcgcgc gaggataccc gcacgccttt ccgcttcgcg ctgtggtcga tggtggtgaa
      361 cgccgccgtc gcctttggcc tgatgcagcc gctgggcttc atcgcggcgg cgcttggcac
      421 caccgttgca gcctgggtca tggttgcgca gctctggtgg ggcacccgcg cgatgggaca
      481 ggccgcccgc gccgatgccc gcctgcgccg gaccgcgccc cggatcgtgc tggcctctgc
      541 gctgatggcg atggccctct ggctgatccg cgactggctg gccgcgtccg ggatggcgcg
      601 cattcccggc ctcgccattc tcgtcttcgg cggcgccgcg atctatttct cgctggcctt
      661 cctcacccgc gcctaccgcc tcggcgatct cgggaccgcc gtcagacgcg gccgctgatc
      721 tgtcgcgatc ccgccgcggc ctttcggggc ggccgcccgg atgctatcgc tggcggatct
      781 gccggatggc tcgcgcaacg ccgccatcga ccagcagaaa gctgagaccg aagccaacgg
      841 cgaaacccgc gatctcggcg atccagccat agcccgtgcc gccgaagacc atcccgaaga
      901 ccagctggaa cagcagcagc atcccgatca gcgtgaaggc acgcatccgg ttcgcattgg
      961 ccgcggccag ccgcgcccac agcaggaagg tgaaggcccc gaccagcccg tagaccgccg
     1021 gatagccccc gatcagcggc accgcgcgcc ccggcagcgc ggccatcgcc acggtataga
     1081 ccagcgcgcc gcccgccgcc gatccgaaga acagcatgat cagggccgtg ggcctgaact
     1141 gacgcgccac caggttgcca agcgccagcg tgaaggccag cacgaacagc gactgcgtga
     1201 aagaggcatt gacgaaggaa tagctgaaca gccggtagat ctgggcccag tcgatcgcgc
     1261 ccatatccca cattcgctgc accatctcgg gcgcataggc cgaaagctgc attcccgcca
     1321 gccgcaatcc cacgccctgc gccccgccga tcagcccgat ccggcccagc ccgaaaacgg
     1381 cctcgctggc gatgatgggc agcgccagca gccagaccgc catcggcagc ggattcagcg
     1441 gcgattcggt cagtccctcg cgcatcggat ttccttctcg gttgctcttg tcgcggccaa
     1501 cagctaagcc agcgccacgg aaaatccaag caggccagac atgagcgatc cgatcaatcc
     1561 gggctttact ccgcgcatct tctcgggcat ccagccctcg ggcgggctga cgctgggaaa
     1621 ctatctgggc gcgctgaaac gctttgccgc cctgcaggga cagggcgccg agacggtcta
     1681 ttgcatcgtc gacctgcacg cgatcaccgt ctggcaggat ccgcaaatgc tgcgcgcccg
     1741 catccgcgag gccgccgccg ctttcatggc atcgggcgtc gatcccgcgc aatcgatcct
     1801 gttcaatcag agccaggtca gcgcccatgc cgaaatggca tggcttttca acacagtggc
     1861 tcgcgtcggc tggatgtatc ggatgaccca gttcaaggac aaggcaggca agaacagcga
     1921 aaacgccagc ctcggactgc tggcctatcc ggctttgatg gcggccgata tcctgaccta
     1981 tcaggcaacc gccgtgccgg tcggcgagga tcagaagcag catctggaac tgacccgcga
     2041 catcgccgcc aagttcaacc atgattacgg cgtcggtcat tttccgatca ccgaaccgct
     2101 gatcgagggg gtggcgaccc gtgtcatgtc gctgcgtgac gggtccagaa agatgtcgaa
     2161 atccgacccc tcggatgcca gccggatcaa cctgaccgac gatgccgaca ccatcgccca
     2221 gaagatccgc aaggcccgca ccgatgccga cccgctgccg ggcgccatcg acgggctgaa
     2281 ggaccgcccc gaggcgcgca atctggtcaa catctatgcc gcgctggccg atgagacccc
     2341 cgatcaggtt ctggcccgct tcgagggcca gggctttggc gcattcaagc cggcgctggc
     2401 cgacatcgcg gtctcggccc tgtccccgat caccgcgaag atgaccgaat acatggacga
     2461 cccggccgaa atcgaccgca tccttgggga tggcgcgctg cgcgcggaca cggtcgcgac
     2521 cccgatcctc gagaagacca agcagatcat gggcctgctg cgcagccggc cctgaagacg
     2581 gcccgggacc gggaaaccgg ccacattccc cgtgcaattt cggatcacgg ggttgcgatc
     2641 cgggagggat tgcgcctatc acgcgctcat cgcatggacc cggcgcaatt ccgggtggct
     2701 cttccggccg ctgatccgcc ggacaacatg aaccgacaga caggatcgcg ccgaggccgg
     2761 ttcgggggac cggcccggtc atggacagat atttcatgtt ctcattcgat acctacaaac
     2821 gccagtggac cggcaatgtc cgcgccgacc tgctttcggg tctggtcgtc gcgctggccc
     2881 tgatccccga ggcgatcgcc ttctcgatca tcgcgggcgt ggatcccaag gtcgggctct
     2941 atgccagctt ctcgatcgcg gtgatcaccg caatcgcggg cgggcggccc ggcatgatct
     3001 cggcggcaac agcggccacg gcggtgctga tggtgacgct ggtccgcgac cacgggttgc
     3061 aatatcttct tgccgcgacg gttctggccg gtctgataca gatcggttgc ggggctttga
     3121 aactgggttt cgtcatgcgc tatgtgtcga aatcggtgat gacaggattt gtcaacgcgc
     3181 tggcgatcct gatctttctg gcgcaactgc c
//
LOCUS       DTVW01000742            2021 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1909828, whole
            genome shotgun sequence.
ACCESSION   DTVW01000742 DTVW01000000
VERSION     DTVW01000742.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2021)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2021)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2021
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1909828"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            223..1131
                     /locus_tag="EYO87_09820"
     CDS             223..1131
                     /locus_tag="EYO87_09820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66274.1"
                     /translation="MQNYIFLIGAPKCGTSNLAAMLGALPEIALARGKEPCFFTDFAE
                     RRWSGPGARAFARIPRDLADYHALFAHKPAAAWRLDASTDYLWNPAAAGRIADFAARP
                     DVGEIRILAVLRDPVARIISEYQHTRRDQLETLGLTASLRAEAQRIADGWHPLFYHRL
                     RSRYSGQIARYDALFGDRLEVLDFHAAQGEALLRQVSRNLGVEPVADVPADRNRNESY
                     VTQSRTVKAALYNPALKRVARALVPREWRKAAWARIDRMNRTTIEVSEPDRAAIRESL
                     ADEIAACAADPRIPTVNWSQAFATPA"
     gene            complement(1179..1655)
                     /locus_tag="EYO87_09825"
     CDS             complement(1179..1655)
                     /locus_tag="EYO87_09825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66275.1"
                     /translation="MIVNFTPITTIRKPALAVAGLLALAGCVPPPGAPTTTGRSAAAT
                     SPYAMAPAAPRTPPPAIKPPAEIAPPTPVAPSFSGPMDSRTGMRQSAVVSVSGNADRG
                     FSVIFRPKQTEPASVDGAAARLCGDAGVASARTNSGGGSSAMPGVSVMVVKCGATA"
     gene            complement(1667..2005)
                     /locus_tag="EYO87_09830"
     CDS             complement(1667..2005)
                     /locus_tag="EYO87_09830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66276.1"
                     /translation="MTDLRPALLLGSLLLSGCGERATEDILRGGIPARTDLHQASTLP
                     PDSVRTVARRDFGWRLIYRPARAPANAGPAAASALCGLERRAVARIDQIPRIDPLADP
                     GARIIDIYCA"
BASE COUNT          314 a          670 c          738 g          299 t
ORIGIN      
        1 ccactggcca tagagctgtt cgacccaggc ggcgttatgg ccttgcagga aggaggaatc
       61 gtggaaatcg gtgttcttgg gctggtcgtt catcgtttcg gacctttagc gagacatgag
      121 aagccgggat gcgggtctgg tcggggcgcg gcgcgacatg tatgccgacg caaatcgcgg
      181 gccgccggcg ggaccgcaag gccggatgtg aaaggtgacg ggatgcagaa ctacatcttc
      241 ctgatcgggg cgcccaaatg cggcaccagc aatctggcag cgatgttggg cgccttgccg
      301 gagatcgcgt tggcccgtgg caaggagccg tgctttttca ccgatttcgc cgagcggcgc
      361 tggtccggac ccggcgcgcg cgcctttgcc cgcatcccgc gtgatctggc cgattaccac
      421 gccctgttcg cgcacaagcc cgccgcggcg tggcgtctgg acgcctcgac cgactacttg
      481 tggaaccccg ccgccgccgg ccgcatcgcc gatttcgcgg cgcgtccgga cgtgggcgag
      541 atccggatcc tggccgtcct gcgcgacccg gtggcgcgca tcatctctga atatcagcac
      601 acccggcgtg accagctgga gacgctgggg ctgaccgcct cgctgcgggc cgaggcgcag
      661 aggatcgcgg atggctggca tccgcttttc tatcaccgcc tgcgcagccg atattccggc
      721 cagatcgccc gctatgacgc gctgttcggc gaccggcttg aagtcctgga tttccacgcc
      781 gcccagggcg aggcgctgtt gcggcaggtc agccggaacc tgggcgtgga accggtcgca
      841 gatgtgcctg ccgaccggaa tcgcaatgaa agctatgtca cccaaagccg gacggtgaag
      901 gccgcgctct acaaccccgc gctgaagcgc gtggcgcgcg ccctggtgcc gcgggaatgg
      961 cgcaaggcag cctgggcgcg catcgaccgc atgaaccgca ccacgataga ggtgagcgag
     1021 ccggaccgcg cggcgatccg agaatcgctg gccgacgaga tcgccgcctg tgccgccgat
     1081 ccgagaatcc cgaccgtgaa ctggtcgcag gctttcgcga cgccggccta ggacggggcc
     1141 ggcgagacag ccgaaatccg ggtgatgtcg gcgagccgtc acgccgtcgc gccgcatttc
     1201 accaccatca ccgacacgcc cggcatggcg ctggagccgc cgccggaatt ggtgcgggcc
     1261 gaggccacgc ccgcgtcgcc gcagagcctg gccgccgcgc cgtcgacgct ggcgggttcg
     1321 gtctgcttcg gacggaagat caccgaaaag ccgcgatcgg cattgcccga gaccgacacg
     1381 acagcggact gccgcatgcc cgtgcggctg tccatcggtc ccgaaaagct gggcgcgacc
     1441 ggcgtggggg gcgcgatctc ggcgggcggc ttgatcgccg gcgggggcgt gcggggtgcc
     1501 gcgggcgcca tcgcataggg cgaggtcgcg gcggcgctgc ggccggtggt ggtcggcgcg
     1561 cccggcggcg gcacgcagcc cgcgagcgcc agcagccccg caacggcaag cgccggtttg
     1621 cggatcgtcg tgatgggggt gaagttgaca atcatgcccg atctcctcat gcgcaataga
     1681 tgtcgatgat acgtgcgccg ggatcggcaa gggggtcgat ccgcgggatt tggtcgatcc
     1741 gcgccacggc gcggcgttcc agcccgcaca gggcgcttgc ggcggccggt ccggcattgg
     1801 cgggcgcgcg ggcgggccga tagatcagcc gccagccgaa gtcgcggcgc gctacggtgc
     1861 gcaccgaatc cggcggcagg gtgctggcct gatgcagatc ggtgcgggcg ggaatgccgc
     1921 cgcgcaggat gtcttcggtc gcgcgttcgc cgcagcccga cagcagcagc gaacccagca
     1981 gcagcgccgg gcgcaggtcc gtcatgctga tgcccggaac c
//
LOCUS       DTVW01000743            1725 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1910755, whole
            genome shotgun sequence.
ACCESSION   DTVW01000743 DTVW01000000
VERSION     DTVW01000743.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1725)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1725)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1725
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1910755"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..343)
                     /locus_tag="EYO87_09835"
     CDS             complement(<1..343)
                     /locus_tag="EYO87_09835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010399678.1"
                     /note="cytochrome c-type biogenesis protein; required for
                     the transfer of heme to apocytochrome c; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme lyase NrfEFG subunit NrfE"
                     /protein_id="HIC66277.1"
                     /translation="MTAEFGHFALVLAFAVALFQMIVPMVGASKGWQGWMDSARPAAI
                     MQFVLTGLSFAALTVAFVTSDFSLKLVYENSHTAKPMLYKFTGVWGNHEGSLLLWVLI
                     LALFGAAAAVFG"
     gene            complement(437..976)
                     /locus_tag="EYO87_09840"
     CDS             complement(437..976)
                     /locus_tag="EYO87_09840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011750210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66278.1"
                     /translation="MGVIDRFLGVSQGVGALGSAATGMAEVFTQNATRKMELEEQAYA
                     RAINQLGQEFQIARPGFFDSFINGLNRLPRPLLALGTMGLFVYAMVEPAGFGIRMEGL
                     QQVPEPLWWLLGAIVGFYFGAREAYYFRNKGWPAKKGAATVSKEGQGDAAALTGAIRP
                     EDDFADNAALRDWVASLRG"
     gene            complement(967..1578)
                     /locus_tag="EYO87_09845"
     CDS             complement(967..1578)
                     /locus_tag="EYO87_09845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_353006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-binding protein"
                     /protein_id="HIC66279.1"
                     /translation="MPSVEEIAREIVAREGGYVNDPDDPGGATNHGVTIGTMRQLGMD
                     LNRDGRIDAADVKALTRAQAEQIFVLHYFRKPRLSELPEKVQPSVFDMYVNAGANAVK
                     ILQRLVSRMGFPAQADGVVGPKTIAAVADAAEAAPDHLADAYGIARRNYYYALADQRP
                     ASRKYARTKIGGKGGWITRAEEFMAPKYRLTEAEHRERTARWA"
BASE COUNT          334 a          585 c          499 g          307 t
ORIGIN      
        1 cgccaaagac cgccgccgcc gcgccgaaca gcgccaggat cagcacccac agcaacaacg
       61 acccctcgtg attgccccag acgccggtaa acttgtacag catcggcttt gccgtatgcg
      121 aattctcata gaccagcttc agcgagaaat ccgaggtcac gaaggcaacg gtcagagccg
      181 cgaaggacag accggtcaac acgaattgca tgatcgcggc gggccgcgca ctatccatcc
      241 agccctgcca gccttttgac gcgccgacca tcggcacgat catctgaaac agcgccacgg
      301 cgaaggccag gaccagggcg aagtggccga attctgcggt catctgggtc gtcctccctt
      361 tctgaccgca gcatatggca acaaaaaaag gggggaaagc ccccctttgg ccgtagccca
      421 cggtttcccg tgtgacctat ccgcgcaggc tggcgaccca gtcgcgcagg gccgcgttgt
      481 cggcgaaatc gtcctcgggg cggatcgcgc cggtcaaggc cgcggcgtcg ccttgcccct
      541 ccttgctgac ggttgcggcg ccctttttcg caggccagcc cttgttgcgg aaataatacg
      601 cctcgcgggc accgaaatag aatccgacga tggcacccag aagccaccaa agcggctcgg
      661 gcacctgctg caagccctcc atgcggatcc cgaaaccggc cggctcgacc atcgcataaa
      721 cgaacagacc catcgtccca agcgccagca gagggcgcgg cagccggttc aacccgttga
      781 tgaaactatc gaagaaaccc ggccgcgcga tctggaattc ctgtcccaac tggttgatgg
      841 cgcgggcata ggcctgttcc tcaagctcca tcttgcgggt cgcgttctgg gtaaagactt
      901 cggccatgcc ggtggcggca ctgccaagcg cgccgacacc ttgcgatacg cccagaaatc
      961 ggtcgatcac gcccatcttg cggtcctttc acgatgttcg gcctcggtca gccggtattt
     1021 cggggccatg aactcctcgg cccgggtgat ccagccgcct tttccaccga tcttggtgcg
     1081 cgcatatttg cggctggccg ggcgctgatc ggcgagggcg taataatagt tccgtcgcgc
     1141 aattccgtag gcgtcggcca gatggtcggg cgcagcctcg gcagcgtcgg cgacggcggc
     1201 gatggtcttc ggccccacca cgccgtccgc ctgcgccgga aaccccatgc gcgaaaccag
     1261 cctttgcagg atcttcaccg cattagcacc ggcattgaca tacatgtcga aaacgctcgg
     1321 ctgcaccttt tccggcaact cggacagacg cggcttgcgg aaataatgca gcacgaaaat
     1381 ctgttcggcc tgggcgcggg tcagcgcctt gacatcggct gcgtcgatcc gcccgtcccg
     1441 gttcagatcc atgcccaact gccgcatcgt cccgatggtc acgccatgat tggtcgcgcc
     1501 gccgggatcg tcggggtcat tcacatagcc accctcgcgg gcgacgatct ctcgcgcgat
     1561 ttcttcgaca ctcggcattc cggtcccctt gaaagccagc cgtcagaacg acggaaagcc
     1621 cgaaaggtga tcggctccgg ttaaccatct gttaaccgaa cgcccgttgc atgtcgtgat
     1681 cctcaggcat cgcacatggt cgcgcccttg ccgccgcggg ttcga
//
LOCUS       DTVW01000744            2895 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1911401, whole
            genome shotgun sequence.
ACCESSION   DTVW01000744 DTVW01000000
VERSION     DTVW01000744.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2895)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2895)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2895
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1911401"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..951
                     /gene="fdxH"
                     /locus_tag="EYO87_09850"
     CDS             <1..951
                     /gene="fdxH"
                     /locus_tag="EYO87_09850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011749103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase subunit beta"
                     /protein_id="HIC66280.1"
                     /translation="PQPTTAAANPPVQPMESNLLPSDVVRASATPDLPQPTRQLTKIA
                     KLIDVSKCIGCKACQAACVEWNDTNPAIGENTGVYENPHDLTPDMFTLMRFSEWDNPA
                     TNELEWLIRKDGCMHCEDPGCLKACPAPGAIVQYSNGIVDFIHENCIGCGYCVTGCPF
                     DIPRISKVDNTSYKCTLCSDRVAVGQGPACAKACPTKAIVFGTKEDMVAHANDRVEDL
                     KSRGYENAGIYDPQGVGGTHVFYVLHHADKPSLYSDLPDNPRISPIVEGWKGVTKTAG
                     MAVMGVAAAGAVLMGLFSRNKVEPEEEIAAERLVRDREEL"
     gene            951..1637
                     /locus_tag="EYO87_09855"
     CDS             951..1637
                     /locus_tag="EYO87_09855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011749102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase subunit gamma"
                     /protein_id="HIC66281.1"
                     /translation="MRRPLYSERGDHIESADPVRVSRYRGLTRLNHWVTAISLIVLAL
                     SGLAFFSPYLYFLTWLFGGGQIARWLHPFVGVLLFFSFLLLFVQMWRLNLPKPEDTTW
                     VANIGDVVTGHEERLPELGKYNAGQKFIFWAMTILIVVLIVSGIMMWEQYFAEFVPIP
                     VRRVATLIHSLSAVAIILVFILHVFAAFWVRGTLRAMTQGDVTGGWAWRHHRKWLREV
                     AGREGRDAAE"
     gene            1679..2593
                     /gene="fdhE"
                     /locus_tag="EYO87_09860"
     CDS             1679..2593
                     /gene="fdhE"
                     /locus_tag="EYO87_09860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018634270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase accessory protein FdhE"
                     /protein_id="HIC66282.1"
                     /translation="MTATTQPDPSVIGGVPTPPLAFLPDPDRLFATRARRFAFLAEHD
                     PRLGPYLSFLAELTGLQARLIDELPAPEPIRSAAIQQARTHRMPPIDRGDLATDEMLH
                     ETLMTLCDQAQPIPMPEPAKLALQAVLASDLADRHWLLENILADRIPEDAAAPHLFAA
                     AAVQVHMARLAATLDAKALVPIRTGICPACGGRPATSTVMAAQGIENLRYATCACCAT
                     RWNEVRIKCLCCGSNKAISYRAAESDEAAVRAEVCSECRSWVKIFYLARNHSLDAIAD
                     DVGSLGLDLLMKETDFSRGGINPYLAGY"
     gene            2593..>2895
                     /locus_tag="EYO87_09865"
     CDS             2593..>2895
                     /locus_tag="EYO87_09865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018634271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-seryl-tRNA(Sec) selenium transferase"
                     /protein_id="HIC66283.1"
                     /translation="MQGFRALPSVDQLLQSETGLGLIAEHGRAMVTRTARARLDLARA
                     AIRQGADGAVEAARLPHLLAADLAAAAQSGLRPILNLTGTILHTNLGRAILAPEAIE"
BASE COUNT          500 a          974 c          905 g          516 t
ORIGIN      
        1 cctcaaccaa ccacggcggc agcaaaccca ccggttcaac cgatggaatc gaacctgctg
       61 ccgtcggatg tcgtccgcgc ctcggcgacg ccggacctgc ctcagccgac gcggcaattg
      121 accaagatcg ccaagttgat cgatgtcagc aagtgcatcg gctgcaaggc ctgccaggcc
      181 gcctgcgtgg aatggaacga caccaatccc gcgatcggcg agaacaccgg cgtttacgag
      241 aacccgcatg atctgacgcc cgacatgttc acgctgatgc gcttcagcga atgggacaac
      301 cccgccacga acgaactgga atggctgatc cgcaaggatg gctgcatgca ttgcgaggat
      361 ccgggctgcc tgaaggcctg cccggcgccc ggcgccatcg tgcagtattc caacggcatc
      421 gtcgatttca tccacgagaa ctgcatcggc tgcggctatt gcgtgaccgg ctgtcccttc
      481 gacattccgc gtatcagcaa ggtcgacaac acaagctaca aatgcacctt gtgttcggac
      541 cgggtggcgg tgggacaggg cccggcctgc gccaaggcat gcccgaccaa ggcgatcgtc
      601 ttcggcacca aggaagacat ggtcgcccat gccaacgacc gggtcgagga tctgaaatcg
      661 cgcggctacg aaaatgccgg catctatgat ccccagggcg tcggcggcac gcatgtcttc
      721 tacgtgctgc accatgccga caagccctcg ctgtacagcg acctgcccga caatccgcgc
      781 atctcgccca tcgtcgaggg ctggaagggc gtcaccaaga ccgcgggcat ggcggtgatg
      841 ggggtcgcgg cggcgggcgc ggtattgatg ggcctgttct cccgcaacaa ggtcgaaccc
      901 gaggaagaaa tcgccgccga gcggctggtc agggatcggg aggaattgtg atgcgtcggc
      961 ccctctattc cgaacgcggc gatcacatcg aaagcgccga tccggtccgc gtcagccgat
     1021 atcgcggcct cacccggttg aaccactggg tgacggcgat ctcgctaatc gtgctggcgc
     1081 tgtcgggcct cgccttcttt tcgccctatc tctatttcct gacctggctt ttcggcggcg
     1141 ggcagatcgc ccgctggctg catcccttcg tcggcgttct gctgttcttc agcttcctgc
     1201 tgctgttcgt gcagatgtgg cggctgaacc tgcccaagcc cgaagacacg acctgggtcg
     1261 ccaatatcgg cgatgtggtc accggccatg aagagcggtt gcccgaactg ggcaaataca
     1321 atgccgggca gaagttcatc ttctgggcca tgaccatcct gatcgtggtc ctgatcgtgt
     1381 ccggcatcat gatgtgggaa caatatttcg ccgagttcgt tccgatcccc gtgcgccgcg
     1441 tcgccacgct gatccattcc ctgtcggcgg tggcgatcat ccttgtcttc atcctgcacg
     1501 tcttcgcggc cttctgggtg cgcggaacgc tacgcgcgat gacgcagggc gacgtgaccg
     1561 gcggctgggc ctggcgacat caccgcaaat ggctgcgaga ggtcgctgga cgcgaaggcc
     1621 gcgacgcggc agagtagcgc gaccctcaaa ccagtggccg gtccggcccg gagataccat
     1681 gactgcgaca actcagcccg acccatccgt catcggcggc gttccgacgc cgccgctggc
     1741 atttctgccc gatccggaca ggctgttcgc cacccgcgcg cggcgctttg cctttctggc
     1801 agaacatgat ccgcgtcttg gaccctacct gtcctttctg gccgaactga ccgggttgca
     1861 ggcccgtctg atcgacgaac tgcccgcgcc cgaaccgatc cggtcggccg cgatccagca
     1921 ggcgcgcacc caccggatgc cgccgatcga ccgtggcgat ctggcgaccg acgaaatgct
     1981 gcacgaaacc ctgatgacgc tttgcgatca ggcccagccc attcccatgc ccgaacccgc
     2041 gaagctggcc ttgcaggcgg tcctggcgtc ggatctggcc gaccggcact ggctgctgga
     2101 aaacattctc gccgatcgca tccccgagga tgccgccgcc ccgcatctgt tcgccgccgc
     2161 cgccgtgcag gttcacatgg cgcgcctggc cgcgacgctg gacgcgaagg cgctggttcc
     2221 gatccgcacc ggcatctgtc cggcctgcgg cggccggccg gcgacctcga ccgtgatggc
     2281 ggcgcagggc atcgagaatt tgcgctatgc cacctgcgcc tgctgcgcga cccgctggaa
     2341 cgaggtgcgc atcaagtgcc tgtgctgcgg atcgaacaag gcgatcagct atcgcgccgc
     2401 ggaaagcgac gaggccgcag tgcgggccga ggtctgttcg gaatgccggt cctgggtcaa
     2461 gattttctac cttgccagga atcacagcct cgatgccatc gccgatgatg tcggttcgct
     2521 ggggctggat ttgctgatga aggaaaccga tttcagccgg ggcggcatca acccctatct
     2581 ggccggatat tgatgcaggg ctttcgcgcc ctgccctcgg tcgatcagct tctgcaatcg
     2641 gaaaccggac tggggctgat cgcggaacat ggccgcgcca tggtgacgcg gaccgcccgc
     2701 gcgcggcttg atctggcccg tgccgcgatc cggcagggcg ccgatggcgc ggtcgaggcg
     2761 gcccgcctgc cgcatctgct ggccgccgat ctggccgcgg cggcgcaatc cggcctgcgc
     2821 ccgatcctga acctgaccgg cacgatcctg cataccaatc tgggccgcgc catccttgcc
     2881 cccgaggcga tcgag
//
LOCUS       DTVW01000745            2696 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1912307, whole
            genome shotgun sequence.
ACCESSION   DTVW01000745 DTVW01000000
VERSION     DTVW01000745.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2696)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2696)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2696
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1912307"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1430)
                     /locus_tag="EYO87_09870"
     CDS             complement(<1..1430)
                     /locus_tag="EYO87_09870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007425217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HIC66284.1"
                     /translation="MATKEDDTDKTDKDENAHSLDMSQAAVKKMIAEARDRGYITYDQ
                     LNTVLPPEQVNSEQIEDVMSMLSEMGINVIEDEDEADEAEGGAVATTASGSREVAVAA
                     TETEKLDRTDDPVRMYLREMGSVELLSREGEIAIAKRIEAGRNTMIAGLCESPLTFKA
                     ITMWRQELLDEEILLRDVIDLETTFGQAMEDEEAEDEELSEEGGAAATSDKREELDAD
                     GNPISSDDDEDEDDGANLSLAAMEASLKPKVLETLEVIARDYEQLADMQDQRMSATLN
                     EDNSFSANAEGAYQKLRSEIVALVNELHLNNSRIEALVDQLYGINRRIVTIDSGMVKL
                     ADAARINRREFIDAYRGSELDPTWIDRLSQNTGRGWQALFERSRDKVEDLRVEMAQVG
                     QYVGVDIEEFRRIVNQVQRGEKEARQAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQ
                     EGNIGLMKAVDKFEYRRGYKFSTYAT"
     gene            complement(1609..>2696)
                     /locus_tag="EYO87_09875"
     CDS             complement(1609..>2696)
                     /locus_tag="EYO87_09875"
                     /inference="COORDINATES: protein
                     motif:HMM:PF10410.7,HMM:PF13155.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="toprim domain-containing protein"
                     /protein_id="HIC66285.1"
                     /translation="RAGFQGAVAPLGTAITSEQLAAMWRLSPEPVIALDGDAAGQRAA
                     QRLIDLALPLTGPGQALRFVLLPAGQDPDDLIRVAGQGAMKALLDQARPLVDLLWSRE
                     TEGQRFDSPERKAALDRRLQQAIARIPDELTRRHYADEIRGKRWQLFGGRRQPRGEGV
                     RQGAAGRGPARRGGASMAPRAPLPTLPVAGPDAGTALLEGASLLICALRPELVALVET
                     RLERLSPRDADRAALLHDLLTGNESEAGRRALEILRSDAQLGLTPPVIGRKDPEAILT
                     MLQNLLDRIEAERAAGPELSRAETEIEGDADEGLTWRFQQVNKARHRAERPELEDSGD
                     LNEDRDKLAAELSDALSRQIWRKPPRR"
BASE COUNT          405 a          923 c          812 g          556 t
ORIGIN      
        1 cacgtcgcgt aggtgctgaa cttgtacccg cggcggtact cgaacttgtc caccgccttc
       61 atcaggccaa tattgccttc ctgaatgaga tcaaggaatt gcaggcccct gttcgtgtat
      121 ttcttggcaa tgctgatgac cagtcgcagg ttcgcctcga ccatctcctt cttggcctgc
      181 cgggcctctt tctcgccgcg ctggacctga ttcacgatgc ggcggaattc ctcgatatcg
      241 acgccgacat actggccgac ctgcgccatc tcgacgcgca gatcctcgac cttgtcgcgc
      301 gatctttcga acagcgcctg ccagccccgg ccggtattct gtgacagccg gtcgatccag
      361 gtcggatcca gttccgaacc gcgataggcg tcaatgaatt cgcggcggtt gatgcgcgcg
      421 gcatcggcca gcttgaccat gccggaatcg atggtgacga tgcggcgatt gatgccgtaa
      481 agctgatcga ccagcgcctc gatgcggctg ttgttcagat gaagttcgtt caccaaggca
      541 acgatttcac tgcgcaattt ctgataggcg ccttcggcgt tggccgaaaa gctgttatcc
      601 tcgttcagcg tggccgacat ccgctgatcc tgcatgtcgg ccagttgttc ataatcgcgg
      661 gcgatgactt ccagcgtctc cagcaccttc ggcttgaggc tggcttccat cgcggcaagc
      721 gacaggttgg cgccgtcgtc ttcgtcctcg tcatcatcgc tgctgatcgg attgccgtcg
      781 gcatccagtt cctcgcgctt gtccgaggtt gccgccgcgc caccttcctc ggacaattcc
      841 tcgtcctcgg cctcttcgtc ttccatcgcc tgaccgaagg tggtctcaag atcgatcacg
      901 tcgcgcagca ggatctcttc gtccagcagt tcctgccgcc acatggtgat ggccttgaag
      961 gtcagcgggc tttcgcaaag gcccgcgatc atcgtgttgc gtccggcctc gatgcgcttg
     1021 gcgatcgcga tctcgccctc gcgagacagc aattcgacgc tgcccatctc gcgaagatac
     1081 atgcggacgg ggtcgtcggt gcggtccagc ttctcggttt cggtggctgc gaccgccacc
     1141 tcgcgcgaac ccgaggcggt ggtggcgact gcgccgccct cggcctcgtc ggcttcgtcc
     1201 tcgtcctcga tcacgttgat gcccatctcg gacagcatcg acatgacatc ctcgatctgt
     1261 tcggaattga cctgctcggg aggcagaacc gtgttcagct ggtcataggt gatgtagccg
     1321 cggtcgcggg cctcggcgat catcttcttg accgccgcct ggctcatgtc cagcgaatgg
     1381 gcattctcgt ccttgtcggt cttgtcggtg tcgtcttcct tggtggccat ccagggctcc
     1441 ctttccgagg cggtgattcg cgaatcaccc gaatcgcgcc gaaactgcct tgcttttacc
     1501 gtgccggccg accgaatcaa agatcggcgc gagcaattgt cctttgccct ccgacagatg
     1561 attcgcacct gccggaccgc cctccgcgca ccttgcgggc aaggtctctc accggcgggg
     1621 cggcttgcgc caaatctgtc tgctcagggc gtcgctcaac tcggccgcaa gcttgtccct
     1681 gtcttcgttc aggtcgccgg aatcctcgag ttccggacgt tcggcgcggt gtcgtgcctt
     1741 gttgacctgc tgaaagcgcc aggtcaggcc ttcgtccgca tcaccctcga tttcggtctc
     1801 ggcccgcgac agttccggtc ctgcggcgcg ttccgcctcg atccggtcca gcagattttg
     1861 cagcatggtc agaatggctt ccggatcctt gcggccgatg acgggcgggg tcaggcccaa
     1921 ttgggcgtcg ctgcgaagga tttcaagagc ccggcgaccg gcctcgcttt cgtttccggt
     1981 cagcagatca tgcaacaatg cggcgcgatc agcatcgcgg ggcgacagcc gttcaagccg
     2041 cgtctcgaca agcgccacca gttccggccg cagggcgcag atcagcaggc tggcgccctc
     2101 cagcaacgcc gttcccgcat cgggcccggc gaccggcaag gtgggaagcg gcgcgcgcgg
     2161 ggccatcgag gcccctccgc gccgggcggg gccgcgcccc gccgcgccct gccgcacccc
     2221 ttcgccccgg ggctgccgcc ggcccccgaa aagctgccat cgttttccgc ggatttcgtc
     2281 ggcataatgg cggcgggtca actcgtcggg gattctggca atggcctgtt gcaggcggcg
     2341 gtccagcgcg gccttgcgtt cggggctgtc gaaacgctgc ccctcggttt cgcggctcca
     2401 cagcagatcg accagcggcc gggcctgatc cagcaatgcc ttcatcgcac cctgccccgc
     2461 caccctgatc agatcgtccg gatcctgacc cgcaggcagc aggacgaaac gcagggcctg
     2521 ccccgggccg gtcagaggca gcgcgagatc gatcagcctc tgcgccgccc gctggcccgc
     2581 cgcgtccccg tccagcgcga tgaccggttc cggcgacagg cgccacatcg cggccagttg
     2641 ttcgctggta atggcggtgc ccagcggcgc caccgcaccc tgaaaacccg cgcgcg
//
LOCUS       DTVW01000746            2658 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1913192, whole
            genome shotgun sequence.
ACCESSION   DTVW01000746 DTVW01000000
VERSION     DTVW01000746.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2658)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2658)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2658
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1913192"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..848
                     /locus_tag="EYO87_09880"
     CDS             <1..848
                     /locus_tag="EYO87_09880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008330102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HIC66286.1"
                     /translation="AGISQQAKIPTVIFNASASAVVSQSEYYVRTSNTLAQVSVPTAQ
                     DALDKGYKTVVTAVSDYAPGVDAETNFAKAFTEGGGEVLESIRMPLSTTDFGPYLQSI
                     QLKKPDALFVFLPYGPPTYSFVNAYRDNGLDKAGIAFVGTSETQEVDLQSLGDAALGL
                     ETGYFYSAAHESPENDAFKAKLKELYPNAEPNPATVAAFDGTHALYEMIRATGGKTDP
                     DAAIAAIKGKSWESPRGPITIDADTRDIVQNVYIRKVEKDADGRLVNREYKTYEAQPD
                     FGAQK"
     gene            861..1733
                     /locus_tag="EYO87_09885"
     CDS             861..1733
                     /locus_tag="EYO87_09885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008330099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HIC66287.1"
                     /translation="MASLLASILIDGFAYGMVLFMVSVGLTVTLGLMRFVNLAHGMFA
                     MIGGYAAASLITMAGVPYILALILAAIVAGIIALGLEFSVIRWMYGRPELDQVLLTIG
                     LVFIGIALAGMLFGNSLVPVPLPDMLRGASDLGFRVMPTQRIVAAVVGLLSLLAIWLL
                     LDRTMFGIRLRATVDNARAAGELGINTRRVYAIAFSVGAALAGLGGVVGAELLPVEPY
                     YPLKYLVLFLAVVAVGGPGSVFGSLIAALLLGTVETAGKYLAPGFATIGLYVVMLLVL
                     SWRPDGLFHRKSRL"
     gene            1741..>2658
                     /locus_tag="EYO87_09890"
     CDS             1741..>2658
                     /locus_tag="EYO87_09890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008330098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HIC66288.1"
                     /translation="MTSFPTRTLGDLAVPLTGLILLALYPSQQAFLAQIAITAILVLS
                     LDLVVGFAGLATLGHAAMFGAGAYAAGLYALHVWSEPLTGLIAGALAGAVVAGATALM
                     LMRAHGLTFLMMTVAISQVLYEIVSKARDVTGGDDGLYGFTMQPVLGEWEFDFFGKLA
                     FWYSLAVLWIVFVLLRRLMMTPFGQTVRAIRDDAGRVGSLGGRVYRHRVVLYTLSGGI
                     AGLAGALSAQTVQVVGLSSLSVTYSAEILVMLVLGGTGRLWGALVGTLVFTVIHHYAA
                     SIDPVRWMLFIGLILVVIVLFLPGGLTRGI"
BASE COUNT          403 a          794 c          902 g          559 t
ORIGIN      
        1 cggccgggat ttcacagcag gcgaaaatcc cgactgtgat cttcaacgcc tcggcctcgg
       61 ccgtggtgtc gcagtccgaa tattacgtgc gtacgtccaa cacgctggcg caggtgtcgg
      121 tgccgacggc gcaggatgcg ctggacaaag ggtacaagac ggtggtgacg gcggtcagtg
      181 attacgcgcc cggcgtcgat gcggaaacca actttgccaa ggcgttcacc gagggcggtg
      241 gcgaggtgct ggaatcgatc cggatgccgc tgtcgaccac cgacttcgga ccgtatcttc
      301 agtcgatcca gttgaagaag ccggatgcgc tgttcgtctt cctgccctac ggtccgccga
      361 cctacagctt tgtcaacgcc tatcgcgaca acgggttgga caaggcaggg atcgcatttg
      421 tcggtacctc cgaaactcag gaggtcgacc ttcagtcgct tggcgacgca gcactggggc
      481 ttgagaccgg gtatttctac tcggccgcgc acgagtcgcc ggaaaacgac gccttcaagg
      541 ccaaactgaa ggaactctat ccgaatgccg agcctaaccc ggcaacggtc gcagcctttg
      601 acggcaccca cgcgctctac gagatgatcc gcgcgacggg cggcaaaacg gatccggatg
      661 cggccatcgc ggcgatcaag ggcaagagct gggaaagccc gcgtgggccg atcacgattg
      721 acgccgacac ccgcgacatc gtgcagaacg tctatatccg aaaggtcgag aaagacgcgg
      781 acggccggtt ggtcaaccgc gaatacaaga cctacgaggc gcagcccgac ttcggcgcgc
      841 agaagtaagg acgcggtcgc atggcatccc ttctcgcgag catcctgatc gacggctttg
      901 cctacggcat ggtgctgttc atggtgtcgg tcggcctgac cgtcactctg ggcctgatgc
      961 gatttgtcaa tctggcgcat ggcatgttcg cgatgatcgg gggctatgcg gccgcaagcc
     1021 tgatcaccat ggccggggtg ccctatatcc tggccctgat cctggcggcg atcgtcgccg
     1081 ggatcatcgc cttagggctg gaattcagcg tcatccgctg gatgtatggt cggccggaac
     1141 tcgatcaggt gttgctgacc atcgggcttg tgttcatcgg gattgcgctg gcggggatgc
     1201 tgttcggcaa ttcgctggtg ccggtgccgc tgccggacat gctgcgcggg gcctcggacc
     1261 tgggtttccg ggtcatgccg acgcagagga tcgtggccgc tgtcgtaggg ctgctgtcgc
     1321 ttctcgcgat ctggctgctc ctggaccgga cgatgttcgg catccgtctg cgtgcaacgg
     1381 tggacaatgc ccgcgccgcc ggcgagcttg ggatcaacac ccgtcgcgtc tatgccattg
     1441 ccttttccgt cggcgcggcg ctggcagggc tgggcggcgt agtcggcgcc gaactgctgc
     1501 cggtagagcc atattatccg ctgaagtacc ttgtgctgtt cctggccgtc gtcgctgtcg
     1561 gcgggccggg cagcgtcttc ggcagcctga tcgccgccct gcttttgggt acggtcgaga
     1621 ctgcgggcaa gtatcttgcc cccggtttcg cgaccatcgg cctctatgtg gtgatgctgc
     1681 tggtgctcag ctggcggccc gacggactgt ttcaccgcaa gtccagactg tgaattgacc
     1741 atgacttcgt tcccgacgcg cacccttggc gatctggccg tgcctctaac cgggttgatc
     1801 ctgctggcgc tctatccgtc gcaacaggcc tttctcgcgc agatcgcgat cacggcgatc
     1861 cttgtcctgt cacttgatct ggtggtcggc tttgccgggc tggcgacgct tggccatgcg
     1921 gcgatgttcg gggcaggggc ctatgcggcc gggctttatg cgctgcatgt ctggtccgaa
     1981 ccgctgaccg ggctgattgc cggcgcactg gcgggtgcgg tcgtggcggg tgcgacggcg
     2041 ctgatgctga tgcgggcgca cgggctgacg tttctgatga tgaccgtcgc gatcagccag
     2101 gtcctgtacg agatcgtcag caaggcgcgc gacgtcaccg gcggcgacga tggtctttac
     2161 ggcttcacca tgcagccggt gctgggcgag tgggagttcg atttcttcgg caagctggcc
     2221 ttctggtaca gccttgccgt gctgtggatc gtctttgtcc tgttgcggcg gctgatgatg
     2281 acgcccttcg ggcagaccgt gcgcgccatt cgcgacgatg cggggcgcgt cggatcgctc
     2341 ggcgggcggg tctaccgtca tcgggtcgtg ctttacaccc tgtcgggtgg catcgccggg
     2401 ctggccgggg cgttgtcggc gcagacggtg caggtcgtag gcctgtccag cctgagcgtc
     2461 acctattcgg ccgagatcct cgtgatgctg gtgctgggcg ggacagggcg gctttggggt
     2521 gcactggtcg gcacgctggt gttcacggtc atccaccact atgcggcctc tatcgacccg
     2581 gtgcgatgga tgctgttcat cgggctcatc ctcgtggtca ttgtgctgtt cctgccgggc
     2641 gggctgacgc gggggatc
//
LOCUS       DTVW01000747            1305 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1914396, whole
            genome shotgun sequence.
ACCESSION   DTVW01000747 DTVW01000000
VERSION     DTVW01000747.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1305)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1305)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1305
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1914396"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..201
                     /locus_tag="EYO87_09895"
     CDS             <1..201
                     /locus_tag="EYO87_09895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012176742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase"
                     /protein_id="HIC66289.1"
                     /translation="PVEDGEAAARKLWSRVGIQILPGAYLSREVDGFNPGKGFVRVAL
                     VADAEATDAALTRLRDVLYDDG"
     gene            198..>1305
                     /locus_tag="EYO87_09900"
     CDS             198..>1305
                     /locus_tag="EYO87_09900"
                     /inference="COORDINATES: protein motif:HMM:PF13491.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK"
                     /protein_id="HIC66290.1"
                     /translation="MRPGKGRGMASWQAKQRDPLFDRNTQAALERRGKELAGAGLVVL
                     GVIIAMMLGSWSADDPSFLSATDEPAENLLGSIGAYIASPLMMIAGYGSWMLVVAAFV
                     WGLRLMLHRGEDRLMRGIFTPIAVALVSVYFSTVVPHGAWQQTYGLGGHFGDMVMGAL
                     LNLMPVKAQIGIRLAALVLALAAIIAIAFVLGFERSELRALWRRFLIGLITAYDTAMR
                     LAGRGARASAGIARRARDKQATAPRTPAKTARAPILTRRQPGSEAGHRDLDAELPEPE
                     LIERDADYDGDAPSADEVSGRISDAIRSRSAKSSVLAAVARRLVREGAVPDAAGDPPA
                     PADAADPAPFGESHARKLTPPRKPVPASRQARAEA"
BASE COUNT          190 a          419 c          488 g          208 t
ORIGIN      
        1 ccggtcgagg atggcgaggc cgcggcccga aagctgtggt cgcgggtggg aatccagatt
       61 ctgccggggg cgtatctgtc gcgcgaggtg gatgggttca atccgggcaa gggttttgtg
      121 cgggtggcgc tggtcgcgga tgcagaggcg acggacgccg cgctgacgcg gttgcgcgac
      181 gtgctgtacg atgacggatg aggccgggga agggtagagg gatggcaagc tggcaggcaa
      241 aacaacgcga tccgctgttc gaccggaaca cgcaggcggc gctggaacgg cgtggcaagg
      301 aactggccgg ggccgggctt gtcgtgctgg gcgtcatcat cgcgatgatg ctgggcagct
      361 ggtcggcgga tgatcccagc tttctttccg cgactgacga gccggcggaa aacctgctgg
      421 gcagtatcgg tgcctatatc gcctcgccgc tgatgatgat cgcgggctac gggtcgtgga
      481 tgctggtcgt ggcggccttt gtctgggggc tgcggctgat gctgcaccgg ggcgaagacc
      541 ggctgatgcg cggcatcttc acgccgatcg ccgtggcgct ggtctcggtc tatttcagca
      601 ccgtcgtgcc gcacggagcc tggcagcaga cctacggcct tggcgggcat ttcggcgaca
      661 tggtgatggg cgcgctgctg aatctgatgc cggtcaaggc tcagatcggc atccggctgg
      721 ccgcgctggt gttggcgctg gccgcgatca tcgccatcgc cttcgtgctg ggattcgaac
      781 gatccgaact gcgcgcgctg tggcggcggt ttctgatcgg gctgatcacc gcctatgaca
      841 cggccatgcg gttggccggg cgcggcgcgc gcgcctcggc cgggatcgcg cggcgggccc
      901 gtgacaagca ggccacggca ccccggacgc ctgcgaaaac cgcgcgtgca ccgatcctga
      961 cccgccgtca gccgggcagc gaggccggcc atcgtgatct cgacgcggaa ctgcccgaac
     1021 ccgaactgat cgaacgcgac gccgattacg acggcgatgc gccctcggcc gacgaggtca
     1081 gcggccgcat cagcgacgcg atacgcagcc gctcggccaa atcctcggtg ctggccgccg
     1141 ttgcccgcag gctggtgcgc gagggtgccg tccccgatgc agcgggcgat ccgcccgccc
     1201 ccgccgatgc ggccgatccc gcgccctttg gcgaaagcca cgcgcgcaag cttacgcccc
     1261 cgcgcaagcc ggtgcccgcc tcgcggcagg cccgcgccga ggccg
//
LOCUS       DTVW01000748            2154 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1915431, whole
            genome shotgun sequence.
ACCESSION   DTVW01000748 DTVW01000000
VERSION     DTVW01000748.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2154)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2154)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2154
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1915431"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..472
                     /locus_tag="EYO87_09905"
     CDS             <1..472
                     /locus_tag="EYO87_09905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66291.1"
                     /translation="LYRDVRHQLVKLALTLEIVHLILRRPSLHMHRVFDLYSLLDGLQ
                     QKALQEFLRSAAVFLNDGVYGGLAELPIIGNIDRIQVLDPRGQSRDGERSGRVLFGPT
                     CDSVDRLPGELALPADIEEGDFVIFHGAGAYSTVTNTRFNGFGAMSHATVMALE"
     gene            507..1592
                     /locus_tag="EYO87_09910"
     CDS             507..1592
                     /locus_tag="EYO87_09910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010397209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2235 domain-containing protein"
                     /protein_id="HIC66292.1"
                     /translation="MVTIRPVQIHVVLMDGTFASLDDGRRSSIGRIHRLLTGLFGPLP
                     GPRPRIHYGLGQQWNRWRTLPELAMGRAMEARIIDAYGWLASGYRPGDQIFLFGYSRG
                     AFAVRSLAGMIGRIGLLRADAATERNTRLAWRYYRDGGSEKAIAAFHRRRCRSEVPIR
                     MVGCFDTVMALGLRLPLLWMLTEPRFRFHDPHLGGQVEYGFQALALDETRAAFAPLLW
                     DDAGGAGHIEQMWFRGAHADIGGQLSGLEFARPLANIPLVWMLEKAEGAGLPLPHDWQ
                     AHFPGDPTAPGIGSWRKWGKAFLSRAPRVAGTIASEALHPTVPDPYPGPALLTGHLAG
                     HALDMPRRISRRWKRAQPASDAASDNI"
     gene            complement(1819..>2154)
                     /gene="metF"
                     /locus_tag="EYO87_09915"
     CDS             complement(1819..>2154)
                     /gene="metF"
                     /locus_tag="EYO87_09915"
                     /EC_number="1.5.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008756286.1"
                     /note="MTHFR; catalyzes NADH-linked reduction of
                     5,10-methylenetetrahydrofolate to 5-methyltetrahydrofolate
                     using FAD as a cofactor; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5,10-methylenetetrahydrofolate reductase"
                     /protein_id="HIC66293.1"
                     /translation="RFRDKCDKAGIDAPIIPGILPIQGWAGAKRFAQSCGTTIPPWAE
                     DAFAAAIRDGGDRERLLATAICAELCDTLIEGGVDRLHFYTLNRPEMTRDVCAALGVQ
                     PVRELEAVA"
BASE COUNT          336 a          716 c          707 g          395 t
ORIGIN      
        1 cctgtatcga gacgttcgcc atcagctcgt caagctcgcg ctgacactcg agatcgttca
       61 cctgatcttg cgccgcccga gcctccacat gcaccgcgtc ttcgatctgt atagcctcct
      121 ggacggactc cagcagaaag ccctgcagga attcctgcgc agcgccgccg tctttctcaa
      181 cgatggcgtc tatggcgggc tggccgaact gccgatcatc ggcaatatcg accgtatcca
      241 ggtgctggac cccaggggcc aatcgcgcga cggcgaacgc agcgggcgcg tattgttcgg
      301 cccgacctgc gattccgtgg accggctgcc tggcgaactg gcgctgcccg ccgacatcga
      361 agagggcgat ttcgtcatct tccacggcgc cggagcctat tcgacggtca cgaacacgcg
      421 cttcaacggc tttggtgcga tgagccacgc gaccgtgatg gcgctggagt aattgtttcc
      481 tcacgctcgc atgctagcgt cggaggatgg taacgattcg cccggttcag attcacgtcg
      541 tgctgatgga cggcaccttc gcctcgctcg atgatgggcg gcggtcgtcg atcggacgta
      601 tccaccggct gctgaccggc cttttcggcc ctctgcccgg tccgcggcca cgtatccatt
      661 acggtctggg ccagcaatgg aaccgctggc gaaccctgcc cgaactggcc atgggccggg
      721 caatggaggc gcggatcatc gacgcctatg gctggcttgc ctcggggtat cgtccgggcg
      781 accagatctt tctgttcggc tattcccgcg gcgcctttgc ggtgcgcagt ctcgccggca
      841 tgatcgggcg gatcggcctg ctgcgcgcgg atgcggccac cgaacgcaac acgcgcctgg
      901 catggcggta ttatcgcgac ggcggatcgg aaaaagccat cgccgccttc caccggcggc
      961 gatgccggtc cgaggtgccg attcgcatgg tcggctgttt cgacacggtg atggcgcttg
     1021 ggttgcggtt gccgctgctg tggatgctga ccgagccgcg ctttcgcttt cacgatccgc
     1081 atctgggcgg ccaggtggaa tacgggtttc aggcgttggc tctggacgag acgcgggctg
     1141 cctttgcgcc gctgctctgg gacgatgccg gcggcgccgg ccatatcgaa cagatgtggt
     1201 ttcgtggcgc ccacgccgat atcggcggac agctcagcgg attggaattt gcccgtccgc
     1261 tggcgaatat cccgctggtc tggatgctgg agaaggccga aggcgcgggc ctgccgctgc
     1321 cccatgactg gcaggcacat ttccccggcg atccgaccgc gcccggtatc ggctcatggc
     1381 gcaaatgggg caaggcattc ctctcgcgtg cgccgcgcgt ggccggaacc atcgccagcg
     1441 aggctctgca tccgacggtg cccgatccct atcccggccc ggcactgctg accggtcatc
     1501 tggccggtca cgcactggac atgccgcgcc gaatatcgcg ccgctggaag cgcgcgcagc
     1561 ccgcatcgga cgccgcctcg gacaatatct gagcgccgga tcggccaaag cccgcaacgc
     1621 gaagcccgcg atccggatcc caagtccgcg cgcgacgtcg gtgacgcggc gatgcagaag
     1681 cctctggcgc gtcctgattg ggccaacctt tggacctctc tggagcaggt aggcatcgcc
     1741 gcgcccgccc caagggatgc cgggccacga ctttccggcg tcttcaggcc gggccggttc
     1801 ggatcggcaa gcgcggcttc aggccactgc ctccagttcg cggacgggtt gcacgccaag
     1861 tgcggcgcag acgtcgcggg tcatttcggg ccggttcagc gtatagaaat gcagccggtc
     1921 cacgccgccc tcgatcagcg tgtcacacaa ctcggcgcaa atggcggtgg ccagaagccg
     1981 ttcgcggtcg ccgccgtcgc ggattgcggc tgcaaaggca tcctcggccc aggggggaat
     2041 ggtcgtgccg cagctttgcg cgaaccgttt ggcgcccgcc cagccctgaa tcggcagaat
     2101 gccgggaatg atcggcgcgt cgatgcccgc cttgtcgcat ttgtcacgga aacg
//
LOCUS       DTVW01000749            1767 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1916657, whole
            genome shotgun sequence.
ACCESSION   DTVW01000749 DTVW01000000
VERSION     DTVW01000749.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1767)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1767)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1767
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1916657"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            440..1741
                     /locus_tag="EYO87_09920"
     CDS             440..1741
                     /locus_tag="EYO87_09920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter permease
                     subunit"
                     /protein_id="HIC66294.1"
                     /translation="MSSPAPFSRYEFLIAWRYLRARRAEGGVSVMTWISLIGIALGVM
                     ALIATLAVRAGFRAEFVDTILGANAHTSVYLSPQQIRNPLTDEVYVTPGRIRDYDAMA
                     ARLAKVPGVLRAEPVVRGQVMATANGSSNVAEVYGVTPDDLKAMPRIVDPATSSGNVD
                     DFDNGIAIGSGIARELSLGVGDKLRLIAPEGARTAFGTTPRVSAYEVVYVFSAGRYDI
                     DRTRIYMPLAEAQRYFNREGAADEIQVYVTDPEKVDDWTLPLMRAAGEGAQVWSWKDS
                     SGSFLSALDMEDDVMFVILSVLVLIASMNITSGLIMLVKNKGRDIGILRTMGLTEGAV
                     LRVFFLCGAFTGVIGTLAGVILGVTLALNVDNIMAAINALSGGGAWQPEVRGIYRLPA
                     ELRAWDIFRAVALSLVLSFIVTIFPARRAARMNPVEALRYE"
BASE COUNT          266 a          563 c          620 g          318 t
ORIGIN      
        1 tcgctgaccg gcgcgccgta atggcgcagc agagccttgg cctgatattc gtgaatgttc
       61 atcgcgaccc cctcatcggt tctgcagatt tgccggtgtc ttggcacaat ccgaagggga
      121 ggcgaaagga tttccaagcc gcattgcgaa aaacggccag aagaccgcca ttgtgatcac
      181 agcccgaaag actgtgatca caaagagctt ttcgttaacg gaaccagcgc gaccccgggg
      241 gccggcgcgg cggagtcccg gggtcgcgcg gcgcggcgtg acgcgcgggc atgaccaccg
      301 gcgggggagc ggcgggcagg gccaggttcg ccccgtcacg ccgcatcgtc gcgccgcgcg
      361 caggggttca cgcctttgtc ggcttgatct tccgggcggc tgcggtcagg ttcgccgcga
      421 ttttgcaaag gccccccgga tgtccagccc cgcgcccttt tcccgttacg aattcctgat
      481 cgcctggcgc tatctgcggg cgcgcagggc cgagggcggg gtcagcgtga tgacctggat
      541 cagcctgatc gggatcgccc tcggcgtgat ggcgctgatc gcgacgctgg cggtgcgcgc
      601 ggggttccgg gccgagttcg tggacacgat cctgggcgcc aatgcccata ccagcgtcta
      661 tctgtccccg cagcagatcc ggaacccgct gaccgacgag gtctatgtca cccccggccg
      721 gatccgggat tacgacgcga tggcggcccg gctggccaag gtgccgggcg tcctccgggc
      781 cgagccggtc gtgcgcggcc aggtcatggc cacggccaac ggatcgtcga acgtggccga
      841 ggtctatggc gtcacgccgg acgatctgaa ggcgatgcca cggatcgtcg atccggcgac
      901 ctcatcgggc aatgtcgatg atttcgacaa cggcatcgcc atcggatccg gcatcgcgcg
      961 ggaattgtcg ctgggtgtcg gcgacaagct gcgcctgatc gcgcccgagg gcgcgcgcac
     1021 cgccttcggc acgacgccgc gggtcagtgc ctacgaggtc gtctatgtct tcagcgccgg
     1081 ccgctatgac atcgaccgga cgcggatcta catgccgctg gccgaggcgc agcgctattt
     1141 caaccgcgag ggcgcggccg acgagatcca ggtctatgtg accgatcccg agaaggtgga
     1201 cgactggacc ctgccgctga tgcgggcggc gggcgagggg gcgcaggtct ggtcgtggaa
     1261 ggattcctcg ggctcgttcc tgtcggcgct ggacatggag gatgacgtga tgttcgtgat
     1321 tctgtcggtg ctggtcctga tcgcgtcgat gaacatcacc tcgggcctca tcatgctggt
     1381 caagaacaag ggccgcgaca tcggcatcct gcgcacgatg gggctgaccg agggcgcggt
     1441 cctgcgggtc ttctttctct gcggggcctt taccggcgtg atcgggaccc ttgcgggggt
     1501 gatcctgggt gtcacgctgg cgctgaacgt ggacaacatc atggccgcca tcaatgcgct
     1561 gagcggcggc ggcgcctggc agcccgaggt ccgcggcatc tatcggctgc cggccgaatt
     1621 gcgggcctgg gacatctttc gcgccgtcgc cctgtcgctg gtcctgtcct tcatcgtcac
     1681 catctttccc gcccgccgcg ccgcgcggat gaacccggtg gaggcgctgc gctatgagtg
     1741 acgtgttgcg gctggaggcc gtgtcca
//
LOCUS       DTVW01000750            1531 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1917885, whole
            genome shotgun sequence.
ACCESSION   DTVW01000750 DTVW01000000
VERSION     DTVW01000750.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1531)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1531)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1531
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1917885"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1405
                     /locus_tag="EYO87_09925"
     CDS             <1..1405
                     /locus_tag="EYO87_09925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009807938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="endonuclease"
                     /protein_id="HIC66295.1"
                     /translation="DLRSLYAEKLARVQGMIAEKPDAERPVLEKRLIEIQTQVQHMQP
                     LGLRSSTLSEAPSEGGIYSEANIDTNQRERLAEPDLRSRIDAALRGTGISTSEVVARI
                     ETGASNAALEHQWIADDLSKVAEARDLNLERRADLEQARDILNDVHVALGTLLERENV
                     LRRDGVVEAEAVSEGFHYHEDSVRAMEGTIRQEMRAEGLTAQQIEDRDWEVVSRAERR
                     IETEQRAYLEAHPDLLVRPGDVIDRSEPYRETITDAARASEITREVDRIMEGRDVRTP
                     VADAVTDDLRTRYPDMPSHLARGLGATYAAVVEIRDTEAINQVRRETEMRDGLGLGKR
                     DERLATRDETAPQFDRSDRLAEEIARVLDHERAGELSAPFETDAERDAFRGEIARVLD
                     VRQLDRLTSGDADALDKVLEDRLDRLYVAKVYLQSDAATANTEALRQVVDELADAEFE
                     KHRATDVDGETERGQVH"
BASE COUNT          306 a          463 c          521 g          241 t
ORIGIN      
        1 ggatctgaga agcctctatg cggaaaagct cgcgcgggtg cagggcatga tcgccgagaa
       61 gcctgacgcg gaacgtcccg tcctggaaaa gcgcctcatc gagatccaga cgcaggtcca
      121 gcacatgcag cctctcggtt tgcgatcatc cacgctgtca gaggccccat cggagggcgg
      181 gatctattcc gaagccaata tcgacaccaa ccagcgcgag cgtctggcag agcccgatct
      241 gagatcgcgc attgacgcgg cactacgggg cacggggatc agcacatccg aagtggtggc
      301 ccggatcgag accggggcct caaatgcagc gctcgagcat caatggatcg cagatgatct
      361 ctccaaagtg gccgaggcgc gcgatctgaa cctcgaacgc cgcgctgatc tggaacaggc
      421 gcgcgacatt ctcaacgatg tgcatgtcgc tcttggtacg cttttggaac gggagaacgt
      481 gttgcgccgg gatggcgtcg tggaagcaga agcggtcagc gaggggttcc actatcacga
      541 ggactcggtc cgggcgatgg aagggacaat ccgtcaggag atgcgcgcag agggcctgac
      601 agcgcagcag atcgaggacc gggactggga ggttgtctca agggcggagc gccggatcga
      661 gaccgagcag cgcgcatatc tcgaggcaca cccggacttg ctcgtacgtc ccggcgatgt
      721 gatcgaccgg tctgagccct acagggagac catcaccgat gcggcccgcg ccagcgagat
      781 cacccgcgag gtcgaccgga tcatggaggg acgcgacgtc cgcacgcccg ttgcagatgc
      841 tgtcacggat gacttgcgca cgcgctatcc ggacatgccg tcccaccttg cccgtgggct
      901 cggtgcgacc tatgcggccg tcgtcgagat acgcgacacg gaggccatca atcaggtccg
      961 ccgcgaaacc gagatgcgcg acgggctcgg gttgggcaag cgtgacgaac gtctagcgac
     1021 ccgcgatgaa actgcaccgc agtttgaccg gtccgaccgc ctcgcagagg agattgcgcg
     1081 tgttctggac catgagcggg cgggggagtt gtccgcgccc ttcgagaccg acgcggagcg
     1141 cgacgccttc cgcggtgaga tcgcgcgggt gctggacgtt cgccaactag accggctcac
     1201 atccggcgat gccgatgcgc tggacaaggt tctcgaggac cgcctcgacc ggctctatgt
     1261 cgccaaggtc tacctgcaat ccgatgccgc gacggccaac acggaggccc tgcgtcaggt
     1321 ggtcgatgaa ctggccgatg ccgaatttga aaaacaccgc gcgacagacg tggatggcga
     1381 aaccgagcgg ggtcaggtcc attgagcgcc gccatgggaa aggcgcggat cgccacgggc
     1441 gtcctgttgg tgacgctggt gaccggggcc atgggctata ccatcgcctc ggcggtgctg
     1501 acttaccagg atctcggctt cggggccgag a
//
LOCUS       DTVW01000751            1987 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1918204, whole
            genome shotgun sequence.
ACCESSION   DTVW01000751 DTVW01000000
VERSION     DTVW01000751.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1987)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1987)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1987
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1918204"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1412)
                     /locus_tag="EYO87_09930"
     CDS             complement(<1..1412)
                     /locus_tag="EYO87_09930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010488741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NCS1 family nucleobase:cation symporter-1"
                     /protein_id="HIC66296.1"
                     /translation="MTDHPDYIHVGGGDPSLYNEDLAPVPHQRRNWGAFEIFNVWNND
                     IQSLFGYTLAASLFLSYGLNGWLTFAAIVVAGLLVMWLVNLSGRPSVRYGIPYAVMAR
                     AAMGVRGARFPALVRGIVAIFWYGVQTYFASTAVALAISAVFAVDGVGGGFLGLSGID
                     WIAYVIVAGFQIGLFLMGIEWVGKFLNWAGPFVYLVMIALALMIWWKAGNGIFSEIGV
                     IFQADAESTRSPVVGFIAVVGTMVAYFAAVVINFGDFSRFVKTEGQMRRGNFWGLPVS
                     MAFFSFIALFITAGSVVLFGERLTDPTAIVERVDSLALTLIAAVTFFAATVGINLVAN
                     FIPAAYDIANMAPASISAKTGGVIAALIAFVIGALWLSLISTIGIAGFVDTLGAILAP
                     LYGILIADYYVVQKRHLVVQDLFTEDPTGRYYYDRGWNMRAIMAVGLAALFSIGTVWL
                     PALQSLSGFGWLIGAGVGGV"
     gene            complement(1624..>1987)
                     /gene="pntB"
                     /locus_tag="EYO87_09935"
     CDS             complement(1624..>1987)
                     /gene="pntB"
                     /locus_tag="EYO87_09935"
                     /EC_number="1.6.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_353312.1"
                     /note="catalyzes reversible transfer of hydride ion
                     equivalent between NAD and NADP; membrane-bound proton
                     pump that translocates protons from cytosolic to
                     periplasmic side of the inner membrane; forms a tetramer
                     composed of two alpha and 2 beta subunits;
                     AB-stereospecific enzyme; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit beta"
                     /protein_id="HIC66297.1"
                     /translation="IHPVAGRLPGHMNVLLAEARVPYDIVMEMDEINEDFPSTDVAIV
                     IGSNDIVNPAAEEDPNSPIAGMPVLEVWKAKQVFVSKRGQGTGYSGIENPLFYKENTR
                     MFYGDAKDSVNKLLPLLE"
BASE COUNT          425 a          663 c          583 g          316 t
ORIGIN      
        1 aacaccccgc cgacgccggc gccgatcagc cagccaaacc ccgacagcga ttgcaaggca
       61 ggcagccaca ctgtcccgat cgagaacagc gccgccaggc cgaccgccat gatcgcgcgc
      121 atgttccaac cgcgatcata atagtagcgg ccggtgggat cctcggtgaa cagatcctgc
      181 acgaccagat gccgcttctg cacgacataa taatccgcga tcaggattcc gtagagcgga
      241 gccaggatcg cgcccagcgt atcgacaaag cccgcgatgc cgatggtcga gatcagcgac
      301 agccacagcg cgccgataac aaaggcgatc agcgccgcga tgacgccgcc ggtctttgcg
      361 ctgatgctgg caggggccat gttggcgatg tcataggcgg ccgggatgaa gttcgctaca
      421 aggttgatgc cgacagtcgc cgcgaagaag gtgaccgccg cgatcagcgt cagcgccagg
      481 ctgtccaccc gctcgacgat ggcggtcgga tcggtcagcc tttcaccaaa cagcacgacc
      541 gatcccgcgg tgatgaaaag cgcgatgaaa ctgaagaagg ccatcgagac aggcaggccc
      601 cagaaattgc cgcggcgcat ctgtccctct gtcttcacga agcgcgagaa atcgccgaaa
      661 ttgatcacca cggcggcgaa ataggcaacc atcgtgccga ccaccgcgat gaaacccacg
      721 accggactgc gcgtgctttc ggcatcggcc tggaaaatga cgccgatttc cgaaaagatt
      781 ccgttgccgg ccttccacca gatcatcagc gccagcgcga tcatgacaag atagacgaac
      841 ggcccggccc agttcagaaa cttgccaacc cattcgattc ccatcaggaa caatccgatc
      901 tggaatccgg cgacgatgac ataggcgatc cagtcgatgc cgctcaggcc cagaaacccg
      961 ccacctacgc cgtcgaccgc gaacactgcg ctgatcgcca gagccaccgc cgtcgaggcg
     1021 aaataggtct gcaccccata ccagaagatc gcgacgattc cgcgcaccag cgccggaaac
     1081 cgtgcgcccc tgacccccat cgcggcacgc gccatcaccg catagggaat gccgtagcgc
     1141 acggagggcc ggcccgacag gttcaccagc cacatcacca gaagcccggc cacgacgatg
     1201 gccgcgaagg tcagccagcc gttcagcccg tatgacagga acagcgacgc cgccagcgtg
     1261 tagccgaaca ggctctggat gtcgttgttc cagacgttga agatctcgaa cgcgccccag
     1321 ttgcgccgct gatgcggaac cggtgcgagg tcctcgttat aaagcgacgg atcgccgccg
     1381 ccgacatgga tatagtccgg gtgatccgtc atcactgtcc ctcatcttct ctgggcgcca
     1441 tcacagcccg gtgaggctcc gccgcgcaag tggctgtgtc gcacggaaag ggtttcaggg
     1501 cgccttgtca cggatttcgg gatcggatcc cggcgcaggc tgcccgaaaa acaggcatcc
     1561 agcgcggccg ggaggctctg gggcgacgcc gtccttcggg tcgcccccta cggccctgac
     1621 cgatcactcc agcagcggca gcagcttgtt caccgaatcc ttggcatcgc catagaacat
     1681 gcgcgtgttt tccttgtaga acagcggatt ctcgatgccg gaatagccgg tgccctgccc
     1741 gcgcttgctg acgaagacct gtttcgcctt ccagacctcc agaaccggca tcccggcgat
     1801 ggggctgttg ggatcctctt cggcggccgg gttcacgatg tcgttcgagc cgatgacgat
     1861 cgccacgtcc gtggacggga aatcctcgtt gatctcgtcc atctccatca cgatgtcata
     1921 gggcaccctg gcctcggcca gcagcacgtt catgtggccc ggcagacggc ccgcaacggg
     1981 gtggatg
//
LOCUS       DTVW01000752            1175 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1920132, whole
            genome shotgun sequence.
ACCESSION   DTVW01000752 DTVW01000000
VERSION     DTVW01000752.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1175)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1175)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1175
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1920132"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1175)
                     /locus_tag="EYO87_09940"
     CDS             complement(<1..>1175)
                     /locus_tag="EYO87_09940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_427802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HIC66298.1"
                     /translation="LMGRDLLGCAQTGTGKTAGFTLPMIDVLAAGRARARMPRSLIIT
                     PTRELATQIAHNFEIYGKYHKLTMALLIGGVSFVEQNAKLDRGVDVLIATPGRLLDHF
                     ERGRILLTDIKILVVDEADRMTDMGFMPDVERIVSLLPKIRQTLFFSATLPPEIRHIA
                     EGFLINPKEISVTPKIAAAELVVQALAIVPERKKREALRALLRSEDIVNALIFCNRKR
                     DVDLLHRSLKRHKFSVAALHGDMSQPARIEILETFKRGDVTLLVASDVAARGLDLPKV
                     SHVFNYDVPINPEDYIHRIGRTGRAGRSGKAFTLAMPEDNNAVEAITRLIGQAIPRVE
                     VAGVGVADFDPNEQERRPRRRDGNGKNRPERNAGKGGDEVKGAARRPRHRKESASRP"
BASE COUNT          195 a          384 c          369 g          227 t
ORIGIN      
        1 tcggggcggg aagcactctc cttgcggtgc cggggcctgc gcgcggcgcc tttcacctca
       61 tccccgccct tgcccgcatt tctctccggg cggttcttgc cgttcccgtc gcgccggcgc
      121 gggcgccgtt cctgttcatt cggatcgaaa tcggcgacac cgacaccggc cacctcgacg
      181 cgcgggattg cctgcccgat caggcgcgtg atggcctcga ccgcgttgtt atcttcgggc
      241 atcgccaggg tgaacgcctt gccgctgcgt ccggcgcggc cggtccgtcc gatgcggtgg
      301 atatagtcct cggggtttat cggcacgtcg taattgaaga catgggatac cttgggcaga
      361 tccagcccgc gggccgccac atcgctcgcc accagcagcg tcacgtcgcc ccgcttgaag
      421 gtctccagga tctcgatgcg ggcgggctgc gacatatctc catgcagcgc ggcaacgctg
      481 aatttatgcc gcttcaacga ccggtggagg agatcgacgt cccgcttgcg attgcagaag
      541 atcagcgcat tgacgatatc ttcgctgcgg agaagcgcgc gcagcgcctc gcgcttctta
      601 cgctcaggca cgatggcaag cgcctgaacc acgagttccg ccgcggcaat cttcggtgtc
      661 accgagatct ccttcggatt gatcagaaat ccctcggcga tgtggcggat ttcgggcggc
      721 agggtggccg aaaagaagag ggtctggcga atcttcggca gcaatgagac gatacgctcg
      781 acatcgggca tgaagcccat gtccgtcatc cgatcggcct catccaccac caggatcttg
      841 atatcggtga gcaggatgcg gccgcgctcg aaatgatcga ggaggcggcc cggtgtcgcg
      901 atcagcacat ccacgccgcg gtccagcttg gcgttctgct cgacgaatga aactccgccg
      961 atcagcagcg ccatggtcag cttgtggtac ttgccgtaga tctcgaagtt gtgggcgatc
     1021 tgcgtcgcca gctcgcgtgt cggcgttatg atcagcgagc gcggcatgcg cgccctggcc
     1081 cttcccgcgg cgagaacgtc gatcatcggc agggtgaacc ccgccgtctt gccggtcccg
     1141 gtctgggcgc atcccaacag atcgcgcccc atcaa
//
LOCUS       DTVW01000753            1422 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1920674, whole
            genome shotgun sequence.
ACCESSION   DTVW01000753 DTVW01000000
VERSION     DTVW01000753.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1422)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1422)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1422
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1920674"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..850
                     /locus_tag="EYO87_09945"
     CDS             <1..850
                     /locus_tag="EYO87_09945"
                     /EC_number="2.6.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010395618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phosphoserine transaminase"
                     /protein_id="HIC66299.1"
                     /translation="SFGEGWVTDAVKQLKLDATVRKADYGQIVDFRQVDFDRDVVFTW
                     NGTTSGVRVPNGDAIPADREGLTICDATSAAFAMDLPWDKLDVVTFSWQKVLGGEAAH
                     GMLILSPRAVARLESFTPDRPLPKIFRLTKGGKLNEGIFKGETINTPSMLAVEDYLVS
                     LKWAGSIGGLKGLIARAEANAAAVRDFIAGKDWIADLAEDPATASTTSVCLKFTDPAI
                     RDGAAFAKAVARRLEKEGVALDAGSYRDAPPGLRIWCGSTVEASDVAALMPWIEHAYR
                     AELAAQ"
     gene            963..>1422
                     /locus_tag="EYO87_09950"
     CDS             963..>1422
                     /locus_tag="EYO87_09950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_354433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate dehydrogenase"
                     /protein_id="HIC66300.1"
                     /translation="MNDMPKVLVSDKLSETAVQIFRDRGVAVDYLPDLGKDKEKLAEV
                     IGDYDGLAIRSATKVTGKLLEKATRLKVVGRAGIGVDNVDIPAASKKGVIVMNTPFGN
                     SITTAEHAIAMMFAVARQLPEASVSTHAGKWEKSRFMGIELCKKDLGIIGC"
BASE COUNT          281 a          415 c          486 g          240 t
ORIGIN      
        1 aagcttcggc gagggctggg tgacggatgc ggtcaaacag ctgaaactgg acgcgaccgt
       61 tcgcaaggcc gattacggcc agatcgtcga tttcagacag gtcgatttcg acagggatgt
      121 cgtcttcacc tggaacggca cgaccagcgg cgtgcgcgtg ccgaatggcg atgcgatccc
      181 cgcagatcgc gaagggctga ccatttgcga cgcgacctcg gcagcctttg ccatggacct
      241 gccctgggac aagctggatg tggtcacctt cagctggcag aaggttctgg gcggtgaagc
      301 cgcgcatggg atgctgatcc tgtcgccacg cgcggtcgcg cggctggaaa gctttacccc
      361 cgacaggccc ttgcccaaaa tcttccggct gaccaagggc ggcaagctga acgagggcat
      421 cttcaagggc gagacgatca acacgccctc gatgctggcg gtcgaggatt atctcgtgtc
      481 tctgaaatgg gccgggtcca tcggcgggct gaaggggttg atcgcgcggg ccgaggcgaa
      541 tgccgcggcg gtgcgcgatt tcatcgccgg caaggactgg atcgccgatc tggccgagga
      601 tccggcgacg gcctcgacca ccagcgtctg cctgaaattc accgatccgg cgatcaggga
      661 cggcgccgcc ttcgccaagg ccgtcgccag gcggttggag aaagagggcg tggcgttgga
      721 tgcggggtcg tatcgcgacg cgccgccggg gctgcgaata tggtgcggct cgaccgtcga
      781 ggcatccgat gtggccgcgc tgatgccctg gatcgaacac gcctatcgag ccgaactggc
      841 cgcacagtga catgcgtccc gcgacggctg ggggactttg cgtcccccag accccctgca
      901 ggatatttcc acaacgaaga tgatcgcacc tgcggggcgc ggccccggtg cgacacatga
      961 ggatgaatga catgccgaag gttcttgtgt ccgacaagct gtcggaaacc gccgtccaga
     1021 ttttccgcga ccgcggcgtc gcggtggatt acctgcccga tctgggcaag gacaaggaaa
     1081 agctggccga ggtgattggc gattatgacg ggctggcgat ccggtccgcg accaaggtga
     1141 ccggcaagct gctggagaaa gcgaccagac tgaaggtcgt cgggcgcgcc ggaatcgggg
     1201 tcgacaatgt cgatattcct gcggccagca agaagggcgt gatcgtgatg aacacgccgt
     1261 tcgggaactc gatcaccacg gccgaacatg cgatcgcgat gatgttcgcc gtcgcaaggc
     1321 aattgcccga agccagcgtc agcacccatg ccggcaaatg ggaaaagagc cgcttcatgg
     1381 ggatcgagct ctgcaagaag gatctcggca tcatcggctg tg
//
LOCUS       DTVW01000754            1957 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1920761, whole
            genome shotgun sequence.
ACCESSION   DTVW01000754 DTVW01000000
VERSION     DTVW01000754.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1957)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1957)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1957
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1920761"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..291)
                     /locus_tag="EYO87_09955"
     CDS             complement(<1..291)
                     /locus_tag="EYO87_09955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurQ"
                     /protein_id="HIC66301.1"
                     /translation="MKAAIITFPGSNCDRDLAIALERAGARVERVWHKDDSLPEGTDL
                     VGVPGGFSYGDYLRCGAIAAHSPIAAPLRDHARRGGFVLGICNGFQVLTELGL"
     gene            complement(390..620)
                     /locus_tag="EYO87_09960"
     CDS             complement(390..620)
                     /locus_tag="EYO87_09960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007256586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2061 domain-containing protein"
                     /protein_id="HIC66302.1"
                     /translation="METRRRSLTKAVLWQMLGLVVMTVVGLLVTGSASAGGSIALINA
                     ALGIVLYTGYERLWQRIGWGRAARPATAARRA"
     gene            729..1598
                     /locus_tag="EYO87_09965"
     CDS             729..1598
                     /locus_tag="EYO87_09965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015499139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XRE family transcriptional regulator"
                     /protein_id="HIC66303.1"
                     /translation="MKNLVDRRDLARQLRRRLSRIMAETGETQSGLARAIGVDRSTVS
                     QFLADEGGRMPGAHLVASAARHFGISTDWLLGLSEHQQMATDLVDASLQVTAATRALI
                     DDQLYQWHQQAAGYKIRHVPTGLPDMLKTHEMLRWEYARHRTRSTEQAIEASERRLDW
                     MRQTASDLEIAMPRQELEALARGEGYYDDLPGALRDAQLDHVHEVTEQLYPSLRVCLF
                     DARELFSAPLTVFGPLMAAIYIGQNYLVFRDSDRVRILTTHFDQLVRHAETGARDLPA
                     LLTGLRDAKGRAE"
     gene            complement(1668..>1957)
                     /locus_tag="EYO87_09970"
     CDS             complement(1668..>1957)
                     /locus_tag="EYO87_09970"
                     /EC_number="1.1.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010398169.1"
                     /note="Converts isocitrate to alpha ketoglutarate; Derived
                     by automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="NADP-dependent isocitrate dehydrogenase"
                     /protein_id="HIC66304.1"
                     /translation="TVTRHYRQHQQGKATSTNSIASIFAWTGGLKHRAKLDGNDALLN
                     FATTLEKVTVQTVEDGFMTKDLALLVGPDQEWLTTMGYLEKVDEYLNKALA"
BASE COUNT          360 a          616 c          634 g          347 t
ORIGIN      
        1 aagcccgagt tcggtcagca cctgaaagcc gttgcagatg cccagcacga agccacccct
       61 tcgggcgtgg tcgcgaagcg gcgcggcgat gggcgaatgc gcggcgatgg ctccgcagcg
      121 caggtagtcg ccataggaaa acccacccgg cacgccgacc agatcggtgc cttcgggcaa
      181 cgaatcgtcc ttgtgccaga cccgttccac gcgggccccg gcgcgttcca gtgcgatggc
      241 cagatcgcgg tcgcaattgg atccgggaaa ggtgatgatc gcggctttca tgacgggctc
      301 cggagggcgg gacgagacgg gaatgtcctt gctgcgcagg cgatagcgga tttcgtcgcc
      361 gttggaaagc gggccgctgt ccgcgcccgc tatgcgcggc gggcggcggt ggctggccgc
      421 gcggccctgc cccagccgat gcgctgccac agacgttcgt agcccgtgta gagaacgatt
      481 cccaacgccg cgttgatcag agcgatagac ccgccggcgc tggccgaacc ggtcaccaaa
      541 aggcccacca ccgtcatcac gaccagcccc agcatctgcc agagaacggc cttggtcagg
      601 gatcggcgac gggtttccat gtcctgctcc ttctgttcgg gattgcgaca gggctatcat
      661 ccggccgacc cgcatagaat tccgaacatt gttagcataa aggcgcaaag cgtgataatt
      721 gtcaccacat gaagaatctt gtggacaggc gcgatcttgc gcggcaattg cggcgcaggc
      781 tttcgcggat catggcagag accggcgaaa cgcagtcagg tctggcccgt gcgatcggcg
      841 tggatcggtc gaccgtgtcg caatttcttg cggatgaggg cgggcggatg cccggcgcgc
      901 atctggttgc ctcggccgcg cggcatttcg ggatcagcac ggactggctg ctgggtctca
      961 gcgaacatca gcagatggca accgatctgg tcgatgcctc gttgcaggtg acggcggcca
     1021 cgcgggcgct gatcgacgat cagctttacc aatggcatca gcaggccgcg ggctacaaga
     1081 tccgccacgt gcccactggc cttcccgaca tgctgaaaac ccatgaaatg ctgcgatggg
     1141 aatatgcccg acaccggacc cgcagcacgg aacaggcgat cgaggcaagc gaaaggcggc
     1201 tggactggat gcggcagacc gcatcggacc tggagatcgc catgccgcgg caagaactcg
     1261 aggcgctggc gcggggcgaa ggctattacg acgatctgcc cggcgccctg cgcgatgccc
     1321 agcttgacca tgtgcatgag gtgaccgaac agctctatcc ctcgctgcgg gtctgtcttt
     1381 tcgatgcgcg ggaattgttc tcggcgccgc tgacggtgtt cgggccgctg atggccgcca
     1441 tctacatcgg tcagaattac ctggttttcc gggacagcga ccgggtccgc atcctgacga
     1501 cgcatttcga ccagctcgtg cgtcacgcag aaacaggcgc gcgcgacctg cccgctttgc
     1561 tgacgggcct gcgcgatgcg aaaggccgcg cggaataatc cgcgcggcct tgcgaagtcg
     1621 gcacccccgc gcccggaacg atcggcggga tcagatggcg cgtgcggtca ggcaagcgcc
     1681 ttgttcaggt attcatccac cttttccaga tagcccatcg tggtcagcca ttcctgatcc
     1741 ggcccgacca gcagcgccag atccttggtc atgaatccat cctcgaccgt ctgcacggtg
     1801 accttctcca gcgtcgtggc gaagttcagc aatgcatcat tgccgtccag cttggcacgg
     1861 tgcttcaacc cgcccgtcca ggcaaagatc gatgcgatcg agttggtcga ggtcgccttg
     1921 ccctgctggt gctgacggta atgtcgcgtg acggtgc
//
LOCUS       DTVW01000755            1132 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1922567, whole
            genome shotgun sequence.
ACCESSION   DTVW01000755 DTVW01000000
VERSION     DTVW01000755.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1132)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1132)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1132
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1922567"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..150
                     /locus_tag="EYO87_09975"
     CDS             <1..150
                     /locus_tag="EYO87_09975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007254643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HIC66305.1"
                     /translation="ADHRGIAEAVKNHDAEKAVEIGVLHLSRLDDTIARISATNANYF
                     EPEET"
     gene            complement(473..>1132)
                     /locus_tag="EYO87_09980"
     CDS             complement(473..>1132)
                     /locus_tag="EYO87_09980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005983271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HIC66306.1"
                     /translation="GARAYWVCPLVDESEVSDLTAAEARFQSLRTQFGDQVRLVHGQM
                     PGDQRDAAMADFAAGRARILVATTVIEVGVDVPEATIMVIERAESFGLAQLHQLRGRV
                     GRGQGASTCLLIYHAPLNETGARRLTTLRDTEDGFRIAEVDLEMRGAGDVIGTAQSGL
                     PRFRIADLEHQAGLMAVARQDARATLERDPGLDSPRGRAIRMLMWLMSQEESIRLIAI
                     G"
BASE COUNT          224 a          377 c          350 g          181 t
ORIGIN      
        1 gcggatcacc gcggcatcgc agaggcggtc aagaaccatg atgccgaaaa ggccgtcgag
       61 atcggcgtgc tgcacctgtc gcggctggac gacacgatcg cgcggatctc ggcaaccaac
      121 gcgaattact tcgagccgga agaaacctga aattgctctg acctgccggg gacgaattcg
      181 gtccggaaga cccaggaaaa aaccggccca tgacggggcc ggtcaagttg cgcgtgcagg
      241 ggacagattc ggcgcacagg cgcggcgccg tcgcaacgcg gggcagaaac ggaaatcagg
      301 cttgcaggat cgcgggcagc cacagcacga tgcccgtggt gacggacagg gcgacaacgc
      361 caagaagatc ggacagaaac tcgcgggtca tgggcaactc ctctctgttg ctgctttgtt
      421 ctcatattga agccgtcgtg taaagaactt tttaagaaca tttcaggaat ttctaaccga
      481 tcgcgatcag ccggatcgat tcttcctggc tcatcagcca catcagcatc cggatcgcgc
      541 ggccgcgcgg actgtcgaga ccggggtcgc gttcaagcgt tgcccgggca tcctgtcgcg
      601 ccaccgccat caacccggcc tgatgttcca gatcggcaat gcggaaacgc ggcagaccgg
      661 attgcgcggt gccgatcaca tcgcccgcgc cccgcatttc cagatccacc tcggcgatgc
      721 ggaatccgtc ctcggtatcg cgcagggtgg tcagacgccg ggcgccggtc tcgttcaggg
      781 gcgcgtgata gatcagcagg caggtcgagg ccccctgccc gcgcccgacg cgcccgcgca
      841 attggtgcag ttgcgccagt ccaaagcttt cggcgcgctc gatcaccatg atcgtggcct
      901 ccggcacatc cacgccgacc tcgatcacgg ttgtggcgac caggatccgc gcccgcccgg
      961 cggcgaaatc cgccatcgcg gcatcgcgct gatcgcccgg catctgcccg tggaccagcc
     1021 gcacctgatc gccgaactgc gttcgaagcg actgaaaccg cgcctcggcc gccgtcagat
     1081 cgctgacctc gctttcatcc accagcgggc agacccaata ggcgcgcgcg cc
//
LOCUS       DTVW01000756            1022 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1922646, whole
            genome shotgun sequence.
ACCESSION   DTVW01000756 DTVW01000000
VERSION     DTVW01000756.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1022)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1022)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1022
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1922646"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1022)
                     /locus_tag="EYO87_09985"
     CDS             complement(<1..>1022)
                     /locus_tag="EYO87_09985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011046421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="error-prone DNA polymerase"
                     /protein_id="HIC66307.1"
                     /translation="APELGLAAIAITDRNSVAGVVRAHTALKEMRRELGKATIRSTVQ
                     VDTCSHQPVGEWKTVGAADRLLPKLIVGSRLVAEDCPVEWLALPTDRPAWHRLSRLLS
                     RGKRRAAKGECRLMLNDLLTGCRGLILIALPPTEPHRAIAPVQAMARRYPGRVFLGAA
                     PRYDGSDQAWFDTCAALAHRVAAPMVAVGDVLMHRAARRRLADVLTCLREGISIDRIG
                     SRALPNAERRLKSPAEMDRLFARHPAAIRRTTQIASLCCFDLDQLGYDYPDEVAADEA
                     PQDRLVRLTREGLARRYPGGAPQRVHDLIDKELALVEELKYAAYFLTVHDIVAEARRR
                     GILCQGR"
BASE COUNT          160 a          355 c          355 g          152 t
ORIGIN      
        1 cgcccctggc acaggatgcc gcgtcggcgt gcctcggcca cgatgtcgtg gacggtcagg
       61 aaataggcgg cgtatttcag ttcctccacc agggccagtt ccttgtcgat cagatcatgg
      121 acccgctgcg gcgcgccacc cggatagcgc cgcgccagac cctcgcgggt cagccggacc
      181 agcctgtcct gaggcgcctc gtctgctgca acctcgtcgg gataatcgta gccgagctgg
      241 tcgagatcga agcagcacag cgaggcgatc tgggtcgtgc gacggatcgc ggccgggtga
      301 cgggcaaaga gacggtccat ctcggcgggg gatttcaggc ggcgctcggc attgggcagg
      361 gcacggctgc cgatgcggtc gatgctgatc ccctcgcgca gacaggtcaa cacatcggcc
      421 agacggcgcc gggcggcgcg gtgcatcagc acgtcaccca ccgcgaccat cggggccgcc
      481 accctgtggg ccagcgccgc gcaggtatcg aaccaggcct gatcgctgcc gtcgtaacgc
      541 ggcgcggcgc ccagaaagac ccgccccgga tagcgccggg ccatcgcctg caccggcgcg
      601 atcgcccggt gcggctcggt tggcggcagc gcgatcagga tcaagccccg gcagccggtc
      661 agcagatcgt tcagcatcag ccggcattcg cccttggcgg cccgccgctt gccacggctc
      721 agcagccgcg acagccggtg ccatgcgggt cggtcggtcg gcagggccag ccattcgacc
      781 ggacaatcct cggccaccag acggctgccg acgatcagtt tcggcaacag ccggtccgcg
      841 gccccgacgg ttttccattc ccccaccggc tgatgcgagc aggtgtcgac ctgcacggtc
      901 gagcggatcg tggccttgcc cagttcgcgc cgcatttctt taagcgcggt atgggcgcgc
      961 accacgccgg cgacggaatt gcggtcggtg atggcgatgg cggcaaggcc cagttcgggg
     1021 gc
//
LOCUS       DTVW01000757            3134 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1923263, whole
            genome shotgun sequence.
ACCESSION   DTVW01000757 DTVW01000000
VERSION     DTVW01000757.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3134)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3134)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3134
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1923263"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..543)
                     /locus_tag="EYO87_09990"
     CDS             complement(<1..543)
                     /locus_tag="EYO87_09990"
                     /inference="COORDINATES: protein motif:HMM:PF10531.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66308.1"
                     /translation="MFRVSRWAILPVVALGPILLTPPALADEYLISPGDELDLSVFAR
                     PDLSRIYRVRSDGTISMHIVGTIPAAGRTPAKLEQEVEALLATAFSDSESVTLEVASY
                     VPIIVSGDVENPGNVPFQAGIDVRSAVAISGGMADPANLDNTSSRMRVSDELANAEVL
                     SKRLAALQVTRARLIAARDGD"
     gene            complement(723..1871)
                     /locus_tag="EYO87_09995"
     CDS             complement(723..1871)
                     /locus_tag="EYO87_09995"
                     /inference="COORDINATES: protein motif:HMM:PF13229.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66309.1"
                     /translation="MPQYDNIIENVTYNSTLRLTGSEWDNTLVRNVVIENVNGNGALL
                     RDVDNVTFENVTIRNVSGDGIKLSTQGSTSNVVISNSDISRVGEDGINAGQRYEQGVS
                     HPGLQIIGNTIDQTGLNGGNDGLRHGIYVQSRDVLIQDNRVTNSEDGNGISVRSSGIV
                     KDNYVEGSNDSGIAYFADHMGSDGTLRIEGNTVVDSGYGNGRSDIDLLSVPNQNYRVD
                     SFIINSNNLERGAAGVRIGNGYNDAVVDINGNVTGTGTISSDSGSERPVSAPAVDDGL
                     SSSTIQGDNGSNILRGTSNDDSFYGLAGADVFVMAKGGGTDTIEDFQPGVDRVFVYGF
                     NNANSVGDLLSLVSERDGDTVLSFGNGDNLVFADTNLNEFSSGDFLFG"
     gene            2352..>3134
                     /locus_tag="EYO87_10000"
     CDS             2352..>3134
                     /locus_tag="EYO87_10000"
                     /inference="COORDINATES: protein motif:HMM:PF13439.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HIC66310.1"
                     /translation="MKGVDPKRVAFFLPHLRHGGVERLCVTLIRSLRRDVFEPLVILQ
                     RQEGEFLDLLKDTPVIALRNRRAPSCIAEIAWHLRRQRVHAVYTATTATNIYAAAAAK
                     LARCRSVISEHTPLSGNLAESKWRQLRLLGLRGTYPLSDLAVAPLAEIGDELKDILGN
                     RCPPFRCLRNPVVEEIQPPGNIPENATKLVSVGRLAEVKRFDLMIEAFAVLRKQRPGA
                     TLEIIGEGPDRARLESVVDSHDLRNSVSLPGFASDVPQRLGNA"
BASE COUNT          634 a          930 c          923 g          647 t
ORIGIN      
        1 atcgccgtcg cgcgcggcga tcaggcgcgc acgcgtcacc tgcagcgcgg ccagccgctt
       61 ggacagaacc tcggcattgg ccaactcgtc agatacgcgc atccggctgc tggtattgtc
      121 aagatttgcc ggatcggcca ttccgccact gatcgccacg gcagagcgca cgtcgatccc
      181 ggcttgaaac gggacattgc ccgggttttc aacgtcgccc gatacgatga tcggcacgta
      241 ggacgccact tccagcgtca ccgattccga atccgagaac gcggtcgcca gaagtgcctc
      301 gacttcctgc tcgagcttcg ccggcgtgcg tccggcggcg ggaatcgtgc cgacaatatg
      361 catcgagatc gtcccgtccg atcgaacccg atagatgcgc gacagatcgg ggcgggcaaa
      421 gaccgacaga tcaagctcat cgccgggact gatgagatat tcgtcggcca gggcgggcgg
      481 cgtcagaagg atcggaccca gtgcgacgac aggcagaatg gcccaacgcg agactctgaa
      541 catcaggttt tccacccacc aagctaccgc acaaaccgta atagagcgtg acgtgcagcc
      601 atgctgcaag tcaagccttc actcgtccgc acgcgcagaa cagggcggga tgaccatatg
      661 gcgatcagcg tcgcaggggg gatgcgcccc gccgggaaac cgacgggacg cggggtcagg
      721 acttagccaa aaaggaaatc gcccgacgaa aattcgttca ggttggtgtc ggcgaagacg
      781 agattgtcgc catttccgaa ggagagcacc gtgtcgccgt cccgttcgct tacgagcgaa
      841 agcagatcgc cgaccgagtt tgcgttgttg aacccgtaga cgaaaacccg gtcaacgccc
      901 ggctggaaat cctcgatcgt atcggtcccg ccgccttttg ccatgacaaa gacatcggca
      961 ccggccagtc cgtagaagct gtcgtcgttc gaggttccgc gaaggatatt gctgccgtta
     1021 tctccctgga tcgtcgagga cgacaggccg tcatcgacgg ccggcgccga aacgggcctt
     1081 tcgctgccgc tgtcactgct gatggttccg gttccggtaa cgtttccgtt gatgtcgaca
     1141 acggcgtcgt tatagccatt tccgatgcgc acgcccgcgg cgcccctctc cagattgttg
     1201 gagttgatga tgaaggaatc gacgcgatag ttctggttcg gaaccgacag aaggtcgata
     1261 tccgaacggc cgttgccata gccgctgtcg accaccgtgt tgccttcgat ccgaagggtg
     1321 ccgtcgctgc ccatgtgatc cgcgaaatac gcaatcccgc tgtcattcga gccttcgaca
     1381 taattgtcct tgacgatgcc ggaactgcgc acagagatgc cgtttccatc ctctgaattg
     1441 gtcacgcgat tgtcttggat caggacatcg cgactctgga catagatacc gtgccgcagg
     1501 ccgtcattgc caccgttcag accggtctgg tcgatggtgt taccgatgat ctgaagtccc
     1561 ggatgcgata ccccctgctc gtatctctgt ccggcgttga tcccgtcttc tccaacccgg
     1621 gatatgtcac tgttcgagat gacgacgttc gatgtcgaac cctgggtgct cagtttgatt
     1681 ccatctccgc tgacatttct gatggtgacg ttttcgaagg tgacattatc gacgtcccga
     1741 agcagcgcac cgtttccatt gacattctcg atcacgacgt tgcgcaccag cgtgttatcc
     1801 cattcactgc cggtcaggcg cagggtgctg ttgtaggtga cgttctcgat aatattgtcg
     1861 tattgcggca ttgtagttcc ttgtcatttc gtgatatggc atctgccatt ctcttggtgt
     1921 cgtccaaaaa caaacctgaa actgtgggaa acaaaattct ggctgcgcag gcgcaagaca
     1981 gctttacgga cgagatgcgc ccaggcacgc tctcgccata gtcgactgca cgaggtcgga
     2041 aacgacgagc gatcctttct cgcctgcggc gccggtgaca cggtcgtcgg cagcacagtc
     2101 tggctttcga tcaaccacag cactcggaaa ccgagttagc gcctgacaaa actgcggtcg
     2161 cggtgcaacc gggcgccggc ggatgctggc tgaaaaggcc gattcttgcc agatgcagca
     2221 agatggcggc acgatttcgc ttgcctgaac gaagcggaaa gtggaccttg tgtggatgaa
     2281 ttgtggttga ggaacatgca catcggaccc gcggcgacga atttcctggt ccagatcgcg
     2341 tatttgtgct catgaagggc gttgatccca aacgggtggc gttcttcctg ccgcacctcc
     2401 ggcacggtgg cgtcgaacgg ctttgcgtca ccctgattcg cagcctgcgc cgcgacgtct
     2461 tcgaaccgtt ggtcatcctg cagcgccagg aaggcgagtt tctggatctg ctgaaggaca
     2521 cgcctgtcat tgcgcttcgc aatcggcgtg cgccgtcgtg tatagcggaa attgcatggc
     2581 atctgcggcg ccagcgggtg cacgcagttt ataccgccac gaccgccacc aacatttatg
     2641 ccgctgccgc ggcaaaactc gccagatgca gatcggtaat cagcgaacat acgccccttt
     2701 ccggaaatct ggctgaatcc aaatggcggc agttgcggct tctgggtctg cgcggaacct
     2761 atccgctgtc cgatctcgcc gtggcgccgc tggccgaaat cggggatgag ctgaaagata
     2821 ttctgggcaa tcgatgcccg ccattccgat gtctgcgcaa tccggttgtc gaggaaatcc
     2881 agccgcccgg caatattccg gaaaatgcca cgaaacttgt cagcgtcggg cgactggccg
     2941 aagtgaagcg ctttgacctg atgatcgagg cctttgccgt gctgcgcaag cagaggccgg
     3001 gggcaaccct ggagatcatc ggtgaagggc ccgatcgcgc ccgcctggaa agcgtcgtcg
     3061 acagtcatga cctgagaaat tccgtctcgc tgccgggctt tgcgagcgat gttccccagc
     3121 ggctcggaaa cgcc
//
LOCUS       DTVW01000758            2172 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1925608, whole
            genome shotgun sequence.
ACCESSION   DTVW01000758 DTVW01000000
VERSION     DTVW01000758.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2172)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2172)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2172
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1925608"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..151
                     /gene="gcvT"
                     /locus_tag="EYO87_10005"
     CDS             <1..151
                     /gene="gcvT"
                     /locus_tag="EYO87_10005"
                     /EC_number="2.1.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748631.1"
                     /note="catalyzes the transfer of a methylene carbon from
                     the methylamine-loaded GcvH protein to tetrahydrofolate,
                     causing the release of ammonia and the generation of
                     reduced GcvH protein; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycine cleavage system aminomethyltransferase
                     GcvT"
                     /protein_id="HIC66311.1"
                     /translation="FGPSVGGPVAMARIPSDIADGAVLFAALRGKRLPVVVTPLPFIT
                     PSYKR"
     gene            160..519
                     /gene="gcvH"
                     /locus_tag="EYO87_10010"
     CDS             160..519
                     /gene="gcvH"
                     /locus_tag="EYO87_10010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010397703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein GcvH"
                     /protein_id="HIC66312.1"
                     /translation="MLKYTEDHEWLREQDGEITVGITRHASEQLGDVVFIELPETGRK
                     VEAGEEIVVIESVKAASDISAPVAGVITAINADLAETPGGVNDDPMAAWFFRIKPAEP
                     DATDGFMDEAAYHDLIG"
     gene            636..>2172
                     /locus_tag="EYO87_10015"
     CDS             636..>2172
                     /locus_tag="EYO87_10015"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010397704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase"
                     /protein_id="HIC66313.1"
                     /translation="MSSWTPTDYNPDDFANRRHIGPSPDEMAEMLTAIGADSLDALID
                     QTVPKAIRQDRPLDWPALSEAALLARMQEVAAGNRVMTSLIGQGYYGTVTPPAIQRNI
                     LENPAWYTAYTPYQPEIAQGRLEALLNYQTMVADLTGLPVANASLLDEATAAAEAMAM
                     ARRQAKSGADAFFVADDLHPQTIAVIETRAAPLGIRILKGGVGDLKADQVFGAIFQYP
                     GTHGHVRDLTPEIAALHETRALAIVATDLLALCLLREPGAMGADIAVGSAQRFGVPMG
                     YGGPHAAFMACRDALKRAMPGRIVGVSVDSGGNQAYRLSLQTREQHIRREKATSNVCT
                     AQALLAVMASFYAVFHGPVGLRAIAQRVHLNAATLANALRAAGAEVAPEAFFDTITVK
                     VGVGQAGILAAAEQRGINLRRVGRDRVGISLDETTDAGVIARLLDAFGIDDPAAPADR
                     PAIPDDLLRDSDYLTHPVFHMNRAESEMMRYMRRLSDRDLALDRAMIPLGSCTMKLNS
                     AAEM"
BASE COUNT          357 a          754 c          734 g          327 t
ORIGIN      
        1 cttcggcccc tcggtcggcg gccccgtcgc gatggcgcga atcccgtcgg acatcgccga
       61 tggcgcggtg ctttttgccg cgttgcgcgg caagcggctg ccggtcgtcg tcacccccct
      121 gcccttcatc acgccctctt acaaacgctg aggaacccca tgctgaaata caccgaagat
      181 catgaatggc tgcgcgagca ggacggcgag atcaccgtcg gcatcacccg gcacgccagc
      241 gagcagctgg gcgacgtggt gttcatcgaa ttgcccgaaa cgggccgcaa ggtcgaggcg
      301 ggcgaggaga tcgtggtgat cgaatcggtc aaggccgcct ctgacatcag cgcgccggtc
      361 gcgggcgtga tcacggcgat caatgccgac ctggccgaga cccccggcgg cgtgaacgac
      421 gacccgatgg cggcctggtt cttccgcatc aagccggcgg aaccggatgc gacggacggc
      481 ttcatggacg aggccgccta tcacgacctg atcggatgag agccgaggcc gggcctgcgg
      541 cccggcgaag gccgggggcg cttcgccccc cggacccccc gaggatattt gacgaccaag
      601 gcaggcccgg cgggtgctgc acgacggaga tgcggatgag cagctggaca ccgaccgact
      661 acaaccccga cgatttcgcc aatcgccgtc acatcggtcc ctcgcccgac gagatggccg
      721 agatgctgac ggcaatcggt gcggacagcc tggatgcgct gatcgaccag accgtgccca
      781 aggcgatccg gcaggaccgt ccgctggact ggcccgccct gtccgaggcc gcgctgctgg
      841 cccggatgca ggaggtcgcg gccgggaatc gcgtcatgac cagcctgatc gggcagggtt
      901 attacggcac cgtcacgccg cccgcgatcc agcgcaacat cctggaaaac ccggcctggt
      961 acactgccta taccccctac cagcccgaaa tcgcgcaggg ccggctggag gcgctgctga
     1021 attatcagac catggtcgcc gacctcaccg ggctgcccgt cgccaatgcc agcctgctgg
     1081 acgaggcgac ggcggcggcc gaggcgatgg cgatggcgcg ccggcaggcc aagtccggcg
     1141 ccgatgcctt cttcgtggcc gatgatctgc atccccagac catcgccgtg atcgagacgc
     1201 gggccgcgcc ccttggcatc cgcatcctca agggcggggt cggcgatctg aaggccgatc
     1261 aggtcttcgg cgcgatcttc cagtatcccg gcacccatgg ccatgtccgc gacctgacgc
     1321 ccgagatcgc ggcgctgcac gagaccaggg cgctggccat cgtggctacc gatctgctgg
     1381 ccctctgcct gctgcgcgaa cccggcgcca tgggcgccga cattgccgtg ggcagcgccc
     1441 agcgattcgg ggtgccgatg ggctatggcg gcccccatgc ggccttcatg gcctgccggg
     1501 acgcgctgaa acgcgccatg ccgggccgga tcgtgggcgt ctccgtcgat tccggcggca
     1561 atcaggccta tcgcctgtcg ttgcagaccc gcgaacagca tatccggcgc gagaaggcga
     1621 ccagcaatgt ctgcacggcg caggccctgc tggcggtgat ggccagtttc tatgcggtgt
     1681 tccacgggcc ggtggggctg cgggccatcg cgcagcgggt gcatctgaac gcggcgacgc
     1741 tggccaatgc gttgcgcgcc gccggggccg aggtcgcgcc cgaggcgttc ttcgacacga
     1801 tcacggtcaa ggtcggcgtg ggtcaggccg gaatcctggc cgccgccgaa cagcgcggca
     1861 tcaatctgcg ccgcgtgggc cgcgaccgcg tcggaatcag cctcgacgag acgaccgatg
     1921 cgggcgtgat cgcgcggctg ctggatgcct tcgggatcga cgatcccgcc gcccctgccg
     1981 accggcccgc aatccccgac gatctgctgc gcgacagcga ctacctgacc catcccgtct
     2041 ttcacatgaa ccgcgccgag tccgagatga tgcgctacat gcgccgattg tcggaccgcg
     2101 atctggcgct ggaccgggcg atgatcccgc ttggctcctg caccatgaag ctgaactcgg
     2161 cggcggaaat ga
//
LOCUS       DTVW01000759            1142 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1927813, whole
            genome shotgun sequence.
ACCESSION   DTVW01000759 DTVW01000000
VERSION     DTVW01000759.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1142)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1142)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1142
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1927813"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..759)
                     /locus_tag="EYO87_10020"
     CDS             complement(<1..759)
                     /locus_tag="EYO87_10020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_351479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HIC66314.1"
                     /translation="MSLFAIRRLGVDVAGRRLIKGLDADLPSGRVIALIGHNGSGKST
                     LLKALARQMPCTGRVSFEGRDLRDWHPRDYARRLGYLPQTTPPAEGMLVRELVALGRY
                     PWHGALGRIGSRDRQAIALALAECGLEPMAGRLVDTLSGGERQRAWLAMMIAQQAGTL
                     LLDEPISALDIAHQVEVLSLVRRMCHDQGRSAVIVLHDVNMAARFCDHVLALKGGRLV
                     MQGDPDALMRPAMLARIYGLGMQVLTRDDGARVAI"
     gene            complement(756..>1142)
                     /locus_tag="EYO87_10025"
     CDS             complement(756..>1142)
                     /locus_tag="EYO87_10025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009819383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe(3+)-hydroxamate ABC transporter permease
                     FhuB"
                     /protein_id="HIC66315.1"
                     /translation="GMLAACLGVRRWLALMPLGGETAIGLGLPLRRARLFLILLSGIG
                     TGAATVLVGPLSFVGLMAPHLARRLGLARPSHHVTGAALIGAGLMLAADFGSRMAGFP
                     YDLPLGLFASLLGAPWLIWLITRRPG"
BASE COUNT          211 a          429 c          368 g          134 t
ORIGIN      
        1 aatggccacg cgggcgccat cgtcgcgggt cagcacctgc atccccaggc catagatccg
       61 ggccagcatc gccggtcgca tcagcgcgtc ggggtcgccc tgcatcacca gccggccgcc
      121 cttcagcgcc aggacatgat cgcagaaccg ggccgccatg ttgacgtcgt gcagcacgat
      181 caccgcgctg cggccctgat cgtggcacat ccgccgcacc agggacagca cctcgacctg
      241 atgggcgatg tccagcgccg agatgggctc gtccagcaac agggtgcccg cctgctgcgc
      301 aatcatcatc gcaagccaag cccgctgccg ctcgcccccc gacagcgtat cgacaaggcg
      361 gccggccatc ggctccagcc cgcattcagc aagcgcaagg gcgatggcct gacggtcgcg
      421 cgatccgatg cggccaagcg cgccgtgcca cggatagcgg ccaagcgcga ccagttcgcg
      481 caccagcatc ccttcggccg gcggggtcgt ctgcggcaga tagcccagcc tgcgggcata
      541 atcgcgcgga tgccagtcgc gcaggtcgcg gccttcgaag ctgacgcggc ccgtgcaggg
      601 catttgccgg gccagcgcct tcagcagggt ggacttgccc gagccgttgt gaccgatcag
      661 cgcgatcacc cgccccgatg gcagatcggc gtccagccct tttatcagcc ggcgcccggc
      721 gacatcgacg ccaagtctgc ggatcgcgaa aaggctcatc ccggacgcct cgtgatcagc
      781 cagatcagcc agggtgcccc cagaagcgac gcgaaaaggc ccagcggcag atcataggga
      841 aagcccgcca tccgggaacc gaaatcggcg gccagcatca ggccggcccc gatcagcgcg
      901 gcaccggtga cgtgatgcga tggccgcgcc aggcccagcc ggcgcgccag atgcggcgcc
      961 atcagcccga cgaagctgag cgggccgacg agcaccgtcg cggcgccggt gccgatcccc
     1021 gacaacagga tcagaaacaa ccgcgcgcgc cgcaagggca ggcccagacc gatcgccgtc
     1081 tcgccgccca gtggcatcag cgccagccat cgacgcacgc cgagacaggc cgccagcatc
     1141 cc
//
LOCUS       DTVW01000760            1098 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1928239, whole
            genome shotgun sequence.
ACCESSION   DTVW01000760 DTVW01000000
VERSION     DTVW01000760.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1098)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1098)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1098
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1928239"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..499)
                     /locus_tag="EYO87_10030"
     CDS             complement(<1..499)
                     /locus_tag="EYO87_10030"
                     /inference="COORDINATES: protein motif:HMM:PF01148.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HIC66316.1"
                     /translation="MSPGAGTRPGLPAAKGKWADLSRRIASTAVLLGIGVMLAVAQGV
                     WLRLGMSLISAITFWELAAMTGWRHPEMHLTAFGRWRPVSLAVIAGLAQFIALVAFSP
                     FASLALLLPLLAGLPGAARRDRPTYAIFGIAILLVAYGLVSFREEFGLGFVMWLMGIV
                     IVSDTA"
     gene            complement(496..>1098)
                     /gene="uppS"
                     /locus_tag="EYO87_10035"
     CDS             complement(496..>1098)
                     /gene="uppS"
                     /locus_tag="EYO87_10035"
                     /EC_number="2.5.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="di-trans,poly-cis-decaprenylcistransferase"
                     /protein_id="HIC66317.1"
                     /translation="RGAERVKQIVRACPDLGVNWLTVYAFSTENWKRSTEEVLGLMKI
                     FRRYIEREAEGMSAEGVRLRFIGGRDRLDGKLQALMSSIEARTAGNTRLNLTVAINYG
                     GRDELLRAATKLACKVAQGEVAEPTENDLHACLDTAGHPDPDLVIRTSGETRTSNFLP
                     WQAAYSEYEFTPTLWPDFSPDHLAAILDRFGLRDRRFGGV"
BASE COUNT          216 a          381 c          347 g          154 t
ORIGIN      
        1 ccgccgtgtc cgaaacgatc acgatgccca tcagccacat cacgaatccc agaccgaatt
       61 cctcgcggaa cgagaccaga ccataggcca ccagcaggat cgcgatgccg aagatcgcat
      121 aggtcggccg gtcgcgacgc gcggcgccgg gaagcccggc aagaagaggc agcagcaagg
      181 ccagcgatgc gaagggcgaa aaggcaacaa gggcgatgaa ctgggccagc ccggcgatca
      241 cggccagcga cacggggcgc cagcggccga aggcggtcag gtgcatctcg gggtggcgcc
      301 agcccgtcat cgccgccagt tcccagaacg tgatggccga gatcagtgac atgcccagcc
      361 gcaaccagac accctgcgcc acggccaaca tcacgccgat ccccagcagc acagcggtcg
      421 aggcgatacg gcgcgacagg tcagcccatt tgcccttcgc ggcgggcagc ccgggccttg
      481 tccccgcgcc cggactcata cgcccccgaa acggcggtcg cgcaggccga accggtccag
      541 aatcgcggcc agatggtcgg gcgagaaatc gggccacaat gtcggcgtga attcatattc
      601 cgaataggct gcctgccatg gcaggaaatt cgaggtccgc gtctcgccac tggtgcggat
      661 gaccagatcg ggatcgggat ggccggccgt gtccagacag gcatgaagat cgttttccgt
      721 cggctcggcg acctcgccct gggcaacctt gcaggccagc ttggtggccg cgcgcagcaa
      781 ttcgtcgcgc cccccgtaat tgatcgccac ggtcaggttc agccgcgtgt tgcccgccgt
      841 ccgtgcctcg atcgaggaca tcagcgcctg caacttgccg tccagccgat cccggccgcc
      901 gatgaagcgc agccgcacgc cctcggccga catgccttcg gcctcacgct cgatatagcg
      961 gcggaagatc ttcatcagac ccagcacctc ctcggtcgag cgtttccagt tctcggtcga
     1021 gaaggcatag acggtcagcc agttcacgcc cagatccggg caggcgcgga cgatttgctt
     1081 gacgcgctcg gccccgcg
//
LOCUS       DTVW01000761            1541 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1928868, whole
            genome shotgun sequence.
ACCESSION   DTVW01000761 DTVW01000000
VERSION     DTVW01000761.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1541)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1541)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1541
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1928868"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            112..399
                     /locus_tag="EYO87_10040"
     CDS             112..399
                     /locus_tag="EYO87_10040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010397979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2484 family protein"
                     /protein_id="HIC66318.1"
                     /translation="MTLLAIGSVAAAAAWVLLASLIPYLRQRHRFVAFWTMIVLGVPV
                     LGWLTLYWGPLVGVGAFALGLWLLLRQPLRDCGTHGLPDARHGQPPAPPQP"
     gene            complement(538..>1541)
                     /locus_tag="EYO87_10045"
     CDS             complement(538..>1541)
                     /locus_tag="EYO87_10045"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_353436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="L-serine ammonia-lyase"
                     /protein_id="HIC66319.1"
                     /translation="LSARDAQGDVIFHRIYYSVGGGFVLTDEELARKGNEDRSDAVSK
                     VPFPFASAAEMLAMAEKSGISIAAMKRANELAFRSESELREGLDRIWRVMRDCMDRGL
                     SATGNLPGGLNVRRRARGIHEKLMAERGMNLTAPHVINDWMSTYAMAVNEENAAGGQV
                     VTAPTNGAAGTVPAVIRYWLDHVPGATERDLPDFLLTAAAIGGLIKHNASISGAECGC
                     QAEVGSASAMAAAGLAAVLGGTPGQVENAAEIALEHHLGMTCDPVKGLVQVPCIERNG
                     LGAIKAVSAASLSLRGDGTHFVPLDAAIETMRQTGRDMSEKYKETSLGGLAVNVPNC"
BASE COUNT          210 a          537 c          516 g          278 t
ORIGIN      
        1 acggctggtc cgcgaacagg cgcggccggg cgatatggtg gtctgcctgg gcgcgggcac
       61 gatctcgggc tgggccaatg cgctgccggc gcgtctgcaa ggacgggccg cgtgacactg
      121 cttgccatcg gttcggtcgc ggcggcggcc gcctgggttc tcctggccag cctgatccca
      181 tacttgcgcc aaaggcatcg ttttgtcgcc ttctggacga tgatcgtgct gggcgtgccg
      241 gttctgggct ggctgacgct gtattggggt ccgctcgtcg gtgtgggggc ctttgccctt
      301 ggactgtggt tgttgctgcg tcagcccctg cgcgattgcg gcacccacgg cctgcccgac
      361 gcgcgccacg gccagccgcc ggccccgccc cagccctgac accacccccc gccccgggca
      421 accggaacgg cgccgcggca gcccgcggtc atgccggcgc cggcaggtcg ggggcgcgtg
      481 cccgccgact tggtcgatcg cccgggcttt cgcgaagccg ctgccggcaa gccggtctca
      541 gcagttcggc acgttcactg ccaatccgcc cagcgaggtt tccttgtatt tctcggacat
      601 gtcgcgtccg gtctgacgca tggtctcgat ggccgcgtcc aggggcacga aatgcgtgcc
      661 atcgccgcgc agcgacaggc tggccgcgct gaccgccttg atcgcaccca ggccgttgcg
      721 ttcgatgcag ggcacctgga ccagcccctt caccgggtcg caggtcatgc ccagatgatg
      781 ttccagcgcg atctcggctg cgttctcgac ctggccaggg gtgccaccga ggaccgccgc
      841 cagcccggcg gccgccattg ccgaggcgct gccgacctcg gcctggcagc cgcattccgc
      901 gcccgagatc gaggcattgt gcttgatcaa gccgccgatc gccgctgcgg tcagcaggaa
      961 atcgggcaga tcgcgttcgg tcgcgccggg aacatgatcc agccagtagc ggatcacggc
     1021 gggaaccgtg cccgccgcgc cgttggtggg cgcggtgacg acctgtcctc cggcggcgtt
     1081 ttcctcgttc acggccatgg cataggtgga catccagtca ttgatgacgt gcggcgcggt
     1141 caggttcata ccacgttccg ccatcagctt ttcgtggatg ccgcgcgcgc ggcggcgcac
     1201 gttcagcccg cccggcaggt ttcccgtggc cgacaagccg cgatccatgc agtcgcgcat
     1261 gacccgccag atccggtcca gcccctcgcg cagttcggat tcgctgcgga aggccagttc
     1321 gttggcgcgc ttcatggcgg caatggaaat gcccgatttt tcagccatgg ccagcatttc
     1381 ggcggcgctg gcgaagggaa agggcacttt cgacaccgcg tcgctgcgat cctcgttgcc
     1441 ttttcgcgcc agttcctcgt cggtcagaac gaagccgccg ccgaccgaat aatagatccg
     1501 gtgaaagatc acatcgccct gcgcgtccct tgccgacagg g
//
LOCUS       DTVW01000762            2398 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1928870, whole
            genome shotgun sequence.
ACCESSION   DTVW01000762 DTVW01000000
VERSION     DTVW01000762.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2398)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2398)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2398
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1928870"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..969
                     /locus_tag="EYO87_10050"
     CDS             <1..969
                     /locus_tag="EYO87_10050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008028024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-synthetase adenylyltransferase"
                     /protein_id="HIC66320.1"
                     /translation="ADLAEACIAALFPVTAEDFARRHGPPPGRGAVVLGMGSLGARML
                     NAGSDLDLIVIYDADGAEASEGPRPLAARPYYARLTQAMITAISAPTAEGRLYEVDMR
                     LRPSGRQGPVATSIQSFENYQMDEAWTWEHLALTRARILARAVRDAAGLDDRVETLRI
                     RILRARGTDRRVMPDLAAMRTRIFASKAPDGVWEAKIGPGRLQDIDLLAQSCALRAGD
                     PGRGTMAQLRAGRRAGLLSDADADGLTSVWRFLWRLNASARLLTDRPLDMDEIGLGAQ
                     EFLLRETAQPDLPALKARLAEVTGQAATLIQAQLPDPPVDGAERTA"
     gene            complement(1003..>2398)
                     /locus_tag="EYO87_10055"
     CDS             complement(1003..>2398)
                     /locus_tag="EYO87_10055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018001014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HIC66321.1"
                     /translation="GEELERMHAIALGKEAAPQMTGPLPVISVMVPLFRESDVTGKLV
                     ARLARLDYPRELTDILLVIEASDDVTRNALKGAALPFWIRVVEVPDGPIQTKPRALNY
                     ALNFCRGQIVGIWDAEDRPDSDQLHKVARGFHHAAPDVACLQGALDYYNPRSNWLARC
                     FTVEYATWFRVLLPGLARLGLVVPLGGTTLFFRRDALEAVGAWDAWNVTEDADLGVRL
                     TRRGWRTEILDTTTDEEANCRALPWIKQRSRWLKGYAMTWGVHMRDPRALWRDLGGRR
                     FLAFQIQFFGSLSQYLLAPVLWSFWLLSLGLPHPLRGPLETVWGGQAAIALFGLFIAS
                     EAIGIAIGLWAVRGAKHRHLMAWVPTLHLYFPLGCLAGWKAIYEVVVKPFYWDKTAHG
                     IFDATETAESAPASPARGTVSLPVLGQIGGQSLADVANDPDRAPVAALVPHPDPAADS
                     DSPTCAPDLRQAAG"
BASE COUNT          407 a          801 c          813 g          377 t
ORIGIN      
        1 gcggatctgg ccgaagcctg catcgccgcc ctgtttcccg tcaccgccga ggatttcgcc
       61 cgccgtcacg gcccgccgcc cggccgcggc gcggtcgtgc tggggatggg gtcgctgggc
      121 gcgcgaatgc tgaacgcggg ctcggatctg gatctgatcg tgatctatga cgctgatggg
      181 gccgaggctt cggaggggcc ccgtccgctc gccgcgcgac cctattatgc tcgactgacc
      241 caggcgatga tcacggccat ttcggcaccc acggccgagg ggcggctata cgaggtcgat
      301 atgcggctgc gcccctcggg gcggcagggg ccggtcgcga cgtcgatcca gagcttcgag
      361 aactaccaga tggacgaggc ctggacatgg gaacatcttg ccctgacgcg cgcgcggatc
      421 ctggcccggg ctgtccgcga tgccgccggt ctcgacgacc gtgtcgaaac gctgagaatc
      481 cgcatcctgc gtgcacgcgg gaccgatcgt cgggtcatgc ccgatctggc agcgatgcgg
      541 acgcgaatct ttgcttccaa agcccccgac ggtgtctggg aggcaaagat cgggcccggc
      601 cggttgcagg atatcgatct tctggcgcaa tcctgtgccc tgcgcgccgg cgatccgggg
      661 cggggcacga tggcgcaact gcgcgcgggc aggcgggctg gattgctgtc ggatgcggat
      721 gccgatggtc tgacctcggt ctggcgcttc ctgtggcggt tgaacgcctc ggcgcggctg
      781 ctgaccgatc ggccgctgga catggacgag atcgggcttg gcgcgcagga atttctgctg
      841 cgcgagacgg ctcagccgga tctgccggcg ctgaaggcgc gactggccga agtgaccggc
      901 caggcggcga cgctgatcca ggcgcaattg cccgatccgc cggtagacgg tgcggaaagg
      961 accgcatagc cccgtgcgcg cgcttgcaca gtttggcagg tctcagcccg cggcctgccg
     1021 caaatcgggc gcgcatgtcg gcgaatcact gtcggccgcc ggatcgggat gcgggaccag
     1081 ggcggcaacg ggcgcgcgat cggggtcgtt cgcgacatcc gcaaggctct gtccgccgat
     1141 ctgacccagg accggcagcg agacggtgcc cctggcgggc gatgccggtg cggactcggc
     1201 ggtttcggtc gcgtcgaaga tgccgtgcgc ggtcttgtcc cagtagaagg gcttgaccac
     1261 aacctcgtag atcgccttcc agccggccag acatcccagc ggaaaataga gatgcagcgt
     1321 cggcacccag gccatgaggt gccgatgctt ggcgccccgc acggcccaga gaccgatcgc
     1381 gatgccgatt gcttcggagg caatgaacag gccgaacagg gcaatcgcgg cctgtccgcc
     1441 ccagaccgtt tccagcggtc cgcgcaacgg atgcggcagg ccaaggctca gcaaccagaa
     1501 gctccacagg accggggcca gcagatattg cgacagggaa ccgaagaact ggatttggaa
     1561 ggccaggaaa cgtcggccgc ccagatcgcg ccacagcgcg cgcggatcgc gcatgtggac
     1621 accccaggtc atcgcatagc ccttgagcca gcgcgaacgc tgcttgatcc agggaagcgc
     1681 gcggcaattc gcctcttcgt cggtggtcgt gtccagaatt tccgtccgcc acccgcgccg
     1741 tgtcaggcgc acgcccagat cggcgtcctc ggtgacgttc caggcgtccc aggcgcccac
     1801 ggcctccagc gcgtcgcgac ggaagaacaa tgtcgtgccg cccagcggaa ccacgagtcc
     1861 caaccgcgcg aggcccggca gaagaacgcg gaaccaggtc gcatattcga cggtaaagca
     1921 tcgcgccagc cagttgctgc gcggattgta gtaatccagt gcgccttgca ggcaggcgac
     1981 atccggcgcg gcatggtgaa agccgcgcgc gaccttgtgc agttgatcgg aatcagggcg
     2041 gtcctcggcg tcccagatac ccacgatctg gccgcggcag aagttcaacg catagttcag
     2101 cgcccgcggc ttggtctgga tcggcccgtc cggcacctcg accacccgga tccagaaggg
     2161 cagggccgca cctttcaggg cgttcctcgt gacatcgtcg ctggcctcga tgaccagcag
     2221 tatgtcggtc aactcgcgcg gataatccag ccgcgccagc cgcgcaacca gcttgcccgt
     2281 tacatcgctt tcccgaaaca gcggcaccat gaccgaaatc accggcaatg gcccggtcat
     2341 ctgcggcgcg gcctccttgc ccagggcgat cgcgtgcatc cgctccagtt cctcgccc
//
LOCUS       DTVW01000763            1687 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1929658, whole
            genome shotgun sequence.
ACCESSION   DTVW01000763 DTVW01000000
VERSION     DTVW01000763.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1687)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1687)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1687
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1929658"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(83..1051)
                     /locus_tag="EYO87_10060"
     CDS             complement(83..1051)
                     /locus_tag="EYO87_10060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010397487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DctP family TRAP transporter solute-binding
                     subunit"
                     /protein_id="HIC66322.1"
                     /translation="MKHICTAALLGAVFATPAAAREVKIGYALAEDSHYGVAAKAFEK
                     SVTDQLGDAFTFKDFPSSGLGGEREVVEGVQLGTVDMTIVSTGTLSNFVPEVGVFDVP
                     FLFSSLDHARRVLDGEIGQEMLARFDEAGLHALAWGEQGFRHITNNRGPITTPADAKG
                     LKIRTMENPVHIKAFEALGAAPTPMAWPEVIGALQQGAIDGQENPLSVIVSAKLNEVQ
                     KYLTLDGHVYSPAVILISPALWNSLDDSQKAAFDKAAKDAVTAMRAYVDEVEASGVET
                     LKQAGMQVNELTPDQKAAFRAALEGPYKDYEAQFGKDLMDRIQAEQ"
     gene            complement(1160..1591)
                     /locus_tag="EYO87_10065"
     CDS             complement(1160..1591)
                     /locus_tag="EYO87_10065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66323.1"
                     /translation="MIRSANRIARLTMAGSVVLLTALPGLSAIRSDQPIQGWPAMEGV
                     DIATLLNQAQSLPTSDMAVGDQPYCAVNDEISSTLKHDFNEAPVDVSRRDGTELWGSD
                     QMGTWTLVATRPDDTSCIIASGIGYDDRKAAEVYYTTAGLR"
BASE COUNT          289 a          547 c          525 g          326 t
ORIGIN      
        1 accgccgcca tcaccgcgag gccggcgatg acgacggtgc cgttcagcac cacgaacagg
       61 cgttccagcc ggcgcatcgg ccctattgtt cggcctggat gcggtccatc agatccttgc
      121 cgaactgcgc ctcgtagtcc ttgtaggggc cttccagcgc ggcgcggaag gcggccttct
      181 ggtcgggcgt caattcgttg acctgcattc cggcctgttt cagtgtctcg acacccgaag
      241 cctcgacctc atcgacatag gcccgcatcg ccgtgaccgc atccttggcg gccttgtcga
      301 aagcggcctt ctggctgtcg tcgagactgt tccacagcgc gggggaaatc aggatgacgg
      361 cgggagaata gacgtggccg tccagcgtca ggtatttctg cacctcgttc agcttggccg
      421 aaacgatcac cgaaagcgga ttttcctggc cgtcgatggc gccctgttgc agcgccccga
      481 tcacctcggg ccaggccatc ggcgtgggcg cggcgccaag cgcctcgaac gccttgatat
      541 ggaccgggtt ttccatcgtg cggatcttca gccccttggc atcggcgggg gtggtgatgg
      601 gtccccgatt attcgtgata tggcgaaagc cctgctcgcc ccaggccagc gcgtgcagcc
      661 cggcctcgtc gaacctggcc agcatttctt gcccgatctc gccgtccagg acgcggcgcg
      721 catgatcgag actgctgaac aggaacggca cgtcgaagac gcccacttcg ggcacgaaat
      781 tcgacagcgt tccggtcgac acgatggtca tgtccaccgt gccaagctgc acaccctcga
      841 ccacttcgcg ttcgccgcca agtcccgacg agggaaaatc cttgaaggtg aaagcatcgc
      901 ccaactggtc ggtgaccgat ttctcgaagg ccttggccgc gacgccgtaa tggctgtcct
      961 cggccagcgc atagccgatc ttcacctctc tggcggcggc gggcgtggcg aagaccgcgc
     1021 ccaaaagcgc ggcggtgcag atgtgtttca tgagatcctc cctcttgcgg cgcgatcctg
     1081 catgacccga aggccatgcg caatcgcggt tccggccgca agaaaagcct gaaatggcgc
     1141 ggaggatcaa gcctcgccgt cagcgcaggc cggcggtcgt gtaatagacc tcggccgcct
     1201 tgcgatcgtc atagccgatc cccgaggcga tgatgcagct tgtatcatcg ggccgcgtgg
     1261 cgaccagcgt ccaggttccc atctggtccg agccccacaa ttcggtcccg tcacgccggc
     1321 tgacatcgac gggggcttcg ttgaaatcat gcttcagagt agagctgatc tcgtcgttca
     1381 ccgcgcaata gggctgatca ccgaccgcca tatccgaggt cggaaggctc tgcgcctggt
     1441 tcagaagggt cgcgatgtcc acgccctcca tggcgggcca cccctggatt ggctgatcgg
     1501 aacggattgc cgaaagtccg ggcagggccg tcagcagaac gacgctgccg gccattgtca
     1561 ggcgggcgat gcggtttgca gagcggatca tcggttcggg cctttccttg cgttttctga
     1621 tgctgaaacg cgcgatttcg ggggtttgtt cccctgcggc gattccggcc cggacaacgc
     1681 cgcttct
//
LOCUS       DTVW01000764            1745 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1931517, whole
            genome shotgun sequence.
ACCESSION   DTVW01000764 DTVW01000000
VERSION     DTVW01000764.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1745)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1745)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1745
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1931517"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1265)
                     /locus_tag="EYO87_10070"
     CDS             complement(<1..1265)
                     /locus_tag="EYO87_10070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018000805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit A"
                     /protein_id="HIC66324.1"
                     /translation="MEQKFIEIRGAREHNLKGVDMDIPRDRLVVITGLSGSGKSSLAF
                     DTIYAEGQRRYVESLSAYARQFLDMMGKPDVDHISGLSPAISIEQKTTSKNPRSTVGT
                     VTEIYDYLRLLFARAGTPYSPATGLPIEAQQVQDMVDRIMAMEEGTRAYLLAPIVRDR
                     KGEYRKEFLELRKQGFQRVKVNGEFHDLDEPPTLDKKFRQNIDVVVDRIVVREGLETR
                     LADSLRTALDLASGIAVLETAPAEGDPLRITFSENFACPVSGFTIPEIEPRLFSFNAP
                     FGACPVCDGLGVELFFDERLVVPDAGLSVDKGAILPWAKSKSAYLTQTVNALARHYGF
                     DKKTAWKDLPDHVRQMFLYGSGEDQIKFRFDDAGRVYEISRVFEGVIPNMQRRLRESD
                     SQWVREEFERYQNNRPCGACNGYRLKPEAL"
     gene            1571..>1745
                     /locus_tag="EYO87_10075"
     CDS             1571..>1745
                     /locus_tag="EYO87_10075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66325.1"
                     /translation="MFNKILVANRGEIAIRVMRAANELGKRTVAVFAEEDKLGLHRFK
                     ADEAYRIGEGMGPV"
BASE COUNT          330 a          514 c          570 g          331 t
ORIGIN      
        1 agggcctcgg gcttcaggcg atagccgttg caggcgccgc agggacggtt gttctgatac
       61 cgctcgaatt cctcgcgcac ccattggctg tcggattcac gaagacgacg ctgcatgttc
      121 gggatcacac cctcgaagac gcggctgatt tcatagaccc ggccggcatc gtcgaaacgg
      181 aacttgatct ggtcttcgcc cgatccgtag aggaacatct gccggacatg gtcgggcaaa
      241 tccttccacg cggtcttctt gtcgaagccg taatgcctgg ccagcgcgtt gacggtctgg
      301 gtcagatagg ccgatttcga cttggcccag ggcagaatcg cgcccttgtc caccgacaat
      361 ccggcatcgg gcacgacaag ccgttcgtcg aagaacagct cgactcccaa cccgtcgcag
      421 accgggcagg cgccgaaggg cgcgttgaag ctgaacagcc gcggctcgat ttccggaatg
      481 gtgaagccac tgaccggaca ggcgaaattt tcgctgaagg tgatgcggag cggatcgccc
      541 tcggcgggtg cggtttccag cacggcgatg ccgctggcca gatccagcgc ggtgcgcagg
      601 ctgtcggcca gccgggtttc caagccctcg cgcacgacga tccggtccac caccacatcg
      661 atgttctggc ggaatttctt gtccagggtc ggcggctcgt ccaggtcatg gaattcgccg
      721 ttgaccttga cgcgctggaa gccctgcttc ctaagttcca gaaactcctt gcgatattcg
      781 cccttgcggt cacgcacgat gggcgccagc agataggcgc gggtgccttc ttccattgcc
      841 atgatccggt cgaccatgtc ctggacctgc tgcgcctcga tcggcaggcc ggtggcgggg
      901 ctgtaggggg tgccggcgcg ggcaaaaaga agccgcaggt aatcgtatat ttccgtgacg
      961 gttccgacag ttgaccgggg attcttcgag gtcgtcttct gttcgatgct gatcgcgggg
     1021 gacaggccgc tgatgtgatc cacgtctggc ttgcccatca tgtccagaaa ctgccgggca
     1081 taggccgaca ggctttcgac atagcggcgc tgaccctcgg catagatcgt atcgaaggcg
     1141 aggctggact tgccgctgcc cgacagcccg gtgatgacca ccagccggtc gcgcggaata
     1201 tccatgtcca cgcctttcag attgtgctcg cgcgcgccgc gaatctcgat gaacttctgt
     1261 tccatgaagc gagcccttga ccgaccagtc gcatcacata gtcaggcggg ttgaaaaagc
     1321 aaccggctta cgagaacata tacagaacgc agatgcaagc agccgcggaa agatcctgtc
     1381 tggatcatca gggcgggatt tgtcggtcga ggcgagggtc gatccggatc gggcgatgac
     1441 ccgcaaccct tggcttcggc ccaggaacgg agaggcgccg atttgcgacc ttcggagcgg
     1501 ccgggacgcc gacgcttgcg ctgcggtgcg gcatgggtag gatgctgccg acgatgaaag
     1561 ggggaccggc atgttcaaca agattctggt ggccaaccgt ggcgagatcg caatccgtgt
     1621 gatgcgggcg gcgaacgaat tgggcaagcg gacggtcgcg gtcttcgccg aagaggacaa
     1681 gctgggcctg caccgtttca aggctgacga ggcgtatcgg atcggcgagg gcatgggccc
     1741 ggtcg
//
LOCUS       DTVW01000765            1481 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1931746, whole
            genome shotgun sequence.
ACCESSION   DTVW01000765 DTVW01000000
VERSION     DTVW01000765.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1481)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1481)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1481
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1931746"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            170..787
                     /locus_tag="EYO87_10080"
     CDS             170..787
                     /locus_tag="EYO87_10080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010239210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome o ubiquinol oxidase subunit III"
                     /protein_id="HIC66326.1"
                     /translation="MSHRAHPGLNLGAAQGDAGSRTEKTVFGFWVFLMSDMITFGILF
                     GHYVVMQRARAGGPGPETLFDLRSVALQTGLLLTSSFTYGLASLGLKHAGTARAVLPW
                     LAVTAALGAGFLALELRDFASMASRGGVPQRSGYLSALWVLVGLHGLHVTMGLFWMAV
                     MAALIAVQGLTDRVKTRLLLLGLYWHFLDLIWIGILSVVFLGGMA"
     gene            784..1119
                     /locus_tag="EYO87_10085"
     CDS             784..1119
                     /locus_tag="EYO87_10085"
                     /inference="COORDINATES: protein motif:HMM:PF03626.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase"
                     /protein_id="HIC66327.1"
                     /translation="MSDDRRGELRRYVRGFVVSAALTGLAFWAVAGSGLTRPSALWIV
                     ALAGIAQVAVQLRCFLHIGWRQQREDLHLIGFSLLLMGLMIGGTVWIMGSLGDRMQQQ
                     AETAAAPDR"
     gene            complement(1215..>1481)
                     /locus_tag="EYO87_10090"
     CDS             complement(1215..>1481)
                     /locus_tag="EYO87_10090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011536979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HIC66328.1"
                     /translation="PQVIYSPRNPKGPRIREIPVDPAILDAGDHNGSTFYQHLGFLEL
                     VRGQRRAPDVSVLDGKWAVLMGIAAQRSMAERRVVELSELTALT"
BASE COUNT          189 a          490 c          534 g          268 t
ORIGIN      
        1 ccgtcgtcct gcgcgccttc gccacgaaca cgcatgaaac catcccggcg gccgaggtcg
       61 cggccgcgca tcgccgcttt ctcgccgcga tcgggacggc ccgcgccatc ggccgcgacg
      121 acgagatgct gcccgccaat cgcggccttg ccgatccggc ggtgccggca tgagccatcg
      181 cgcgcatccc ggcctgaatc tcggcgccgc gcaaggcgac gcgggcagcc ggaccgaaaa
      241 gaccgtcttc ggcttctggg tctttctgat gagcgacatg atcaccttcg ggatcctttt
      301 cggccactac gtcgtgatgc agcgcgcgcg cgcgggcggt ccggggcccg agacgctgtt
      361 cgacctgcgc agcgtcgcgc ttcagacggg gctgctgctg accagttcct tcacctacgg
      421 gctggcgagc cttgggctga aacatgcggg aaccgcccgc gccgtgttgc cctggcttgc
      481 ggtgacggcc gcgcttgggg ccgggttcct ggcgctggag ctgcgcgatt tcgccagcat
      541 ggcgtcccgg ggcggcgttc cgcagcgcag cggctatctg tcggcgctct gggtgctggt
      601 ggggcttcac ggcctgcatg tcacgatggg tcttttctgg atggcggtga tggccgcgct
      661 gatcgcggtg cagggcctca cggaccgggt aaagacccgc cttctgctgc tgggtctcta
      721 ctggcacttt ctggacctga tctggatcgg gatcctttcg gtcgtttttc tgggaggcat
      781 ggcatgagcg acgatcggcg aggcgagctg cggcgctatg tccgcggatt cgtcgtttcg
      841 gcggcgctga cgggtctggc cttctgggcg gtcgcgggca gcggcctgac gcgcccgtcc
      901 gcgctgtgga tcgtggcgct ggccggtatc gcgcaagtgg cggtgcagtt gcgttgcttt
      961 ctgcatatcg gctggcgtca gcagcgcgag gatttgcacc tgatcgggtt ttcgctgttg
     1021 ctgatgggcc tgatgatcgg cggaacggtc tggatcatgg gcagcctcgg ggaccggatg
     1081 cagcaacagg ccgaaacggc cgcggcgccg gaccgctgag ccgcgcgcgc cccgcgcgga
     1141 aggccggcag gccgcgcccc cggcgtcccg cgcccggtcg gcaggagccg gcgcgacgcg
     1201 gcccgcgtcg gctgtcaggt cagggcggtc agttcgctca gttccacgac ccgccgttcg
     1261 gccatcgacc gctgcgcggc aattcccatc agcaccgccc atttgccgtc caggaccgaa
     1321 acatccggcg cgcggcgttg cccgcgcacg agttccagga accccagatg ctggtagaag
     1381 gtcgagccgt tgtgatcgcc ggcatcgagg atggccggat cgaccgggat ctcgcggatc
     1441 cgcgggccct tgggattgcg cggcgaatag atgacctgcg g
//
LOCUS       DTVW01000766            1064 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1936256, whole
            genome shotgun sequence.
ACCESSION   DTVW01000766 DTVW01000000
VERSION     DTVW01000766.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1064)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1064)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1064
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1936256"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..262)
                     /locus_tag="EYO87_10095"
     CDS             complement(<1..262)
                     /locus_tag="EYO87_10095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018001552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-erythrulose kinase"
                     /protein_id="HIC66329.1"
                     /translation="MTRIFDDPEDFAATALAGFCSANRDRVAAVPHGAVRAAPGAEGK
                     VALVIGGGSGHYPAFLGYVGAGLADAAVAGDVFASPSTSAVAG"
     gene            complement(246..>1064)
                     /locus_tag="EYO87_10100"
     CDS             complement(246..>1064)
                     /locus_tag="EYO87_10100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018001553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate isomerase/epimerase"
                     /protein_id="HIC66330.1"
                     /translation="AAGFVAVDPTDSWLRVADLEAPMRAEFMAICRGLGLAVPAISTA
                     RRSVIDPDHGDANLAYCHRVIDTAAELGAGWVSIGLFGPLTRAQQDATWFWTQPGPRN
                     PADPETYRLALDRVRELAGHAGRSGIQLSLEMYEDTYLGTGEGAARFMTDLDHPAARL
                     NIDIGNLVRLHRPVEPWARMIARCAPFAGYWHVKNYYRMEDSATGRAMSHPAPLLGGT
                     INWRAAINMALDLGFDSPFLVEHYGGDGLWICARNRDYIRDILTERRRRDDKDL"
BASE COUNT          181 a          371 c          356 g          156 t
ORIGIN      
        1 cgcccgccac ggcgctggtc gagggcgagg cgaagacgtc gccggcgacc gcggcatcgg
       61 caaggccggc gcccacatat cccagaaagg ccgggtaatg gccggagccg ccgccgatca
      121 ccagcgccac cttgccctcg gcgcccggcg cggcccgcac cgcgccatgc ggcaccgccg
      181 ccacgcggtc gcgattggcc gaacagaaac ctgccagcgc ggttgccgcg aagtcttcgg
      241 ggtcgtcaaa gatccttgtc atcgcggcgc ctcctctcgg tcagaatgtc gcggatataa
      301 tcccggttgc gtgcgcagat ccaaagcccg tcgccgccgt aatgttcgac cagaaacggg
      361 ctgtcgaaac ccagatccag cgccatgttg attgccgccc gccagttgat cgtgccgccc
      421 agcaacggcg ccggatggct catggcccga ccggtggcgc tgtcttccat gcggtagtag
      481 ttcttgacat gccaatagcc cgcgaagggg gcgcatcgcg cgatcatccg ggcccagggc
      541 tcgaccgggc gatgcaggcg gaccagattt ccgatgtcga tgttaagcct cgcggccgga
      601 tgatcgagat cggtcatgaa gcgcgcggcg ccttcgccgg tgcccagata ggtatcctca
      661 tacatctcca gcgacagctg gatgccgctg cgcccggcgt gacccgccag ctcgcgcaca
      721 cgatccagcg ccagccggta ggtttcggga tcggccgggt tgcgggggcc gggctgggtc
      781 cagaaccatg tcgcgtcctg ctgcgcccgt gtcagcgggc cgaacaggcc gatactgacc
      841 cagcccgcgc ccagttccgc cgccgtgtcg atgacgcggt ggcaataggc cagattcgcg
      901 tcaccgtgat cggggtcgat cacgctgcgg cgcgcggtcg agatggcggg cacagccaga
      961 ccaagaccgc ggcagatcgc catgaactcg gcgcgcatgg gcgcctccag atcggcaacg
     1021 cgcagccacg aatccgtcgg atcgacggcg acgaagcctg cggc
//
LOCUS       DTVW01000767            1754 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1938028, whole
            genome shotgun sequence.
ACCESSION   DTVW01000767 DTVW01000000
VERSION     DTVW01000767.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1754)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1754)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1754
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1938028"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..519
                     /locus_tag="EYO87_10105"
     CDS             <1..519
                     /locus_tag="EYO87_10105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009504576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HIC66331.1"
                     /translation="LVNNAGIVRAAMIHKMDRATWQQVIDVNLTGVFACLQAVGTYYK
                     DRVEKDPESAARRAIVNISSDAGRRGTIGQINYGAAKSGVLGLTMSAAREWGRYRINV
                     NSVCFGMVETPMTETIRSEKFADRYMAQIPMGRMSTPEEVAQPVCFLLSNAASYITGQ
                     HLSVNGGFHIGF"
     gene            521..916
                     /locus_tag="EYO87_10110"
     CDS             521..916
                     /locus_tag="EYO87_10110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009504575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HIC66332.1"
                     /translation="MAGIGQGPGPDAVFAAKLAEGVFEIQKCGGCGTHVFHPRVICPA
                     CGSADLGWFAPTGRGTVYARTVVRRKPERGGDYNVVLVDLEEGVRMMSRIDGIAHDQI
                     VAGLKVTASIGEGAEGDPAVVFRPEGEAN"
     gene            913..>1754
                     /locus_tag="EYO87_10115"
     CDS             913..>1754
                     /locus_tag="EYO87_10115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009803560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiolase"
                     /protein_id="HIC66333.1"
                     /translation="MSLRGKAAIVGAALAGCGEAHGKSSMEITIEGVHGALADAGIAL
                     GEVDAVATCQPLDMLSGLTLAQELGLNPRFTMNNRMGGSSFLSHTLWAAMLLELRLAD
                     TVLICYGSNQRTASGKLMTALGLPTYEAPYRPLFPLSSYALATDRHMTQFGTTREQLA
                     DVAVAARAWAQKNPDAFMRDPLTREDVIASRPVSDPLRVRDCCLVTDGGGAIVMRRAE
                     TAKDHPRPPVYLLGGGEGTTHRDISEMADLTVTGAAQSGRTAMDMAGVKPADIDVVQL
                     YDAFT"
BASE COUNT          334 a          535 c          574 g          311 t
ORIGIN      
        1 cttgtgaaca acgccgggat cgtgcgcgcc gcgatgatcc acaagatgga ccgggccacc
       61 tggcaacagg tcatcgacgt gaacctcacc ggtgtcttcg cctgccttca ggccgtgggg
      121 acctattaca aggaccgggt cgaaaaagac cccgaaagcg ccgcgcgccg tgccatcgtg
      181 aatatctcat ccgatgccgg gcgtcgcggc accatcggtc agatcaatta tggcgcggca
      241 aaatccgggg ttctgggcct gacaatgagc gccgcgcgtg aatggggccg ttaccgcatc
      301 aacgtcaatt cagtctgttt cggaatggtc gagacaccaa tgactgagac catccgctct
      361 gaaaaattcg ccgacaggta tatggcgcag attccgatgg gacggatgag cacccctgaa
      421 gaagtcgcgc agcccgtctg tttcctgttg tccaacgcgg catcctatat caccggccag
      481 cacctgagcg tgaacggtgg cttccacatc gggttctgag atggccggca ttggacaagg
      541 cccagggccg gacgccgtct tcgccgcgaa gctggccgag ggcgtcttcg agattcagaa
      601 atgtggcggc tgcggcaccc atgtattcca tccgcgcgtg atctgtccgg cctgcggcag
      661 cgcggatctg ggatggttcg cgccaaccgg gaggggcacc gtctatgcgc gaacggtcgt
      721 gcgccgaaaa ccggaacgag gcggcgatta caacgtggtt ctggtggacc tggaggaagg
      781 ggtacgaatg atgtcgcgca tcgacggtat cgcgcatgac cagattgtcg ccgggctgaa
      841 agtaaccgcg tcgatcggcg aaggcgccga aggtgacccc gccgtggttt tccggccaga
      901 aggagaagca aattgagttt acggggaaaa gccgccatcg tcggtgcagc gctggcaggc
      961 tgcggcgagg cccatggcaa aagctcgatg gagatcacaa tcgagggggt gcacggcgcg
     1021 cttgccgatg cggggatcgc acttggcgag gtcgatgccg ttgccacctg ccagccgctg
     1081 gatatgctgt cgggtcttac actggcgcag gaattgggct tgaaccccag gttcacgatg
     1141 aacaaccgca tgggcggctc gtcgttcctg tcgcacacgc tctgggccgc gatgctgctc
     1201 gaattgcggc tcgctgatac cgtgttgatc tgctacggat cgaaccagcg caccgcctcg
     1261 ggcaagctga tgactgcgct tggcctgccg acctacgagg ccccctaccg accgttgttc
     1321 ccgctgtcgt cctatgcgct ggccacagac cgtcacatga cgcaattcgg cacaacgcgc
     1381 gaacagctgg ccgacgtggc ggtggcggcc cgggcctggg cccaaaagaa ccccgacgct
     1441 ttcatgcgcg atcctctgac gcgcgaggat gtcatcgcct cgcggccggt ttccgaccct
     1501 ctgcgggtgc gcgactgctg ccttgtgacc gatggcggtg gcgcgattgt gatgcgccgg
     1561 gccgagacgg ccaaggatca ccccagacct ccggtgtatt tgctgggcgg cggcgagggc
     1621 acgacgcacc gcgacatctc cgaaatggcg gacctgaccg tgaccggcgc tgcgcaatca
     1681 gggcgaacgg ccatggacat ggcgggtgtc aaacccgcgg acatcgacgt ggtccagctc
     1741 tacgacgcgt tcac
//
LOCUS       DTVW01000768            1142 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1938865, whole
            genome shotgun sequence.
ACCESSION   DTVW01000768 DTVW01000000
VERSION     DTVW01000768.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1142)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1142)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1142
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1938865"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
BASE COUNT          177 a          378 c          384 g          203 t
ORIGIN      
        1 cgacgccgat gccgaaacgc ttccgcgtga tcaggcgctg ctggatcacg cccgccagcg
       61 catcgacgcg ctggccgaac attacaacca cggcggggtc cggcgctttt tcctgctgca
      121 tcggcgccgt cagtggagtg cgacggaccg cgtctggatg ggctgggaac gcaagcgcgg
      181 aaagctgacc gagctgaaca tgctgctgcg cggtcagacc gggaccagct ttctggcgac
      241 cggcccgacc ccgcccgagg gggtgcgcta tgtggtgacg ctggacagtg acacccgatt
      301 gccacgcgac accgtcgcgg ccctggccgg caagatggcc catcccgtca accttccggt
      361 cagcgacgag aagggtctgg tgatccgggg ccatgcgatc atgcagccgc gggtcacgcc
      421 ctccctgacg accggggccg aagcctcggt cttccagcgc gcattttccg cgaaccgggg
      481 gcttgatccc tatgtgttcg ccgtctcgga tctttaccag gatctgttcg gtcagggcag
      541 cttcaccggc aagggcatct acgacgtcga tgcgtttcag gcggcgatga ccgcccgcgt
      601 gcccgaaaac gccattctca gccacgacct gctggaagcc agcctggccc gcgcggcgct
      661 ggtatcggat atcgaggtgg tcgagaattt ccccacccgc tacgcgaacg aggcaagccg
      721 ccagcatcgc tggatgcgcg gcgactggca gttgctgccg ctgatcgtca cgccgggaaa
      781 cggactgaac gggctggcgc ggttcaagat gctggacaat cttcgccggt ccctggtcgc
      841 gccgggctgg cttgcgacct cggtcgcggg ctggctgctg ctgccgggat cggcggcggc
      901 gctgtggcaa ttggcgctga tcctgctgat ggtgctggtg ccgatccttc agatcgatac
      961 caacgtcctt cggcgccagt atggcgtgtc atgggggtat cacatccacc aggtgctgcg
     1021 cgacgcccgc atctcgttca cccagttcgg gctgcggctg accacggtcg cggatcgggc
     1081 ctggtcgacg gcggacgcca tcttccggac cttgtggcgg cttgccgtca gcaggcgcaa
     1141 cc
//
LOCUS       DTVW01000769            1002 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1942555, whole
            genome shotgun sequence.
ACCESSION   DTVW01000769 DTVW01000000
VERSION     DTVW01000769.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1002)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1002)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1002
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1942555"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            55..>1002
                     /locus_tag="EYO87_10120"
     CDS             55..>1002
                     /locus_tag="EYO87_10120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66334.1"
                     /translation="MKDDAGLELTARFTVSRNDARRGVTVRLPLTGGNLGPDACRVNG
                     LRHPVSRSPDGLGLLVELPARPTTAAVPAAGRVDEIVFDLHPVVRRTGGGRTIQLGIP
                     PVLDSRVELTLPAGFPKLVVPDIHDHTAAGRHVVPLSWTNRLELTWLPSGASRAPGAK
                     VSAQVLGRIDLHPLRRKVDYRVRVQVESGGIDFVTLTLPGGVVVDAGDVAADDVLAVS
                     VLPIAEDRRRIVVEFTGPRSGEFEIRVSGRRPRSDSADSVIQLKPNLVLSHGTPATVV
                     PIRETVIGVTPAPGFQLIQIGLLPTGTKTVDPAEFAGLWV"
BASE COUNT          143 a          353 c          346 g          160 t
ORIGIN      
        1 caaccgcggg gcattccgga gtacctgttg acgtcagctc gctacgaggg tcgcgtgaag
       61 gatgatgcgg gcctcgagtt gacggcgcga ttcacggtca gccggaacga tgcccgccgc
      121 ggcgtgaccg ttcgcctgcc gttgaccggc ggcaacctgg gacccgatgc ctgccgggtc
      181 aacggcctcc ggcatccggt ctcccgcagc cccgacggcc tgggcctgct ggtcgaactg
      241 cccgcccgcc ccaccaccgc ggcggtgccg gccgccggtc gtgtcgacga gatcgtgttc
      301 gacctgcacc cggtggtccg acgcacgggc ggcgggagaa caattcagct ggggattccc
      361 ccggtgctcg acagccgtgt cgagctgacc ctgccggccg gattccccaa gctggtcgtc
      421 cccgacatcc acgaccacac cgccgcggga cgacacgtcg tgccgctcag ctggaccaac
      481 cggctcgaac tgacctggtt gcccagcggc gcgtctcggg ccccgggcgc caaggtgtcc
      541 gcgcaggtgc tcggccggat cgacctgcat cccctgcgtc gcaaggtcga ctatcgcgtg
      601 agggtccagg tcgagtccgg tggtatcgac ttcgtcacgc tgacgctgcc ggggggtgtc
      661 gtcgtcgatg ccggcgacgt ggctgccgac gacgtgctcg cggtcagcgt gctgccgatc
      721 gccgaggatc gccgccggat cgtggtcgag ttcaccggcc cccgcagcgg ggaattcgag
      781 atccgggtga gcggtcgcag gccgaggtcc gactcggcgg actcggtgat ccagctgaaa
      841 ccgaacctgg tcctttcgca cggcacgccc gcgacggtcg tgccgattcg cgaaaccgtg
      901 atcggagtca ccccggcccc gggctttcaa ctcatccaga tcggcctgct gccgaccggg
      961 acgaaaacgg tcgatcccgc ggaatttgcc gggctgtggg tg
//
LOCUS       DTVW01000770            1089 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1942787, whole
            genome shotgun sequence.
ACCESSION   DTVW01000770 DTVW01000000
VERSION     DTVW01000770.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1089)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1089)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1089
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1942787"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..262)
                     /locus_tag="EYO87_10125"
     CDS             complement(<1..262)
                     /locus_tag="EYO87_10125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012178421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylate-amine ligase"
                     /protein_id="HIC66335.1"
                     /translation="MEEPEFSLGIEEEYLLVDAESGELAQAPDALMQACKTELDDQVS
                     PEFLRCQIEVGTPVCANIGDARTHLRHLRATIARQAAQFGLAP"
     gene            564..>1089
                     /locus_tag="EYO87_10130"
     CDS             564..>1089
                     /locus_tag="EYO87_10130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66336.1"
                     /translation="MKYWKEAAVGAFMAVAASGASAATCGPATGDTKTVTVTSGSATV
                     ECYAYGSGNINGNVKQDPILNGQTTGKNTFTLVSGPVITGLTFLDNTSESGGAKDGGV
                     TSNGSSTVGQSVFGKVTVGDVSPYSGLILALKIGNKTSLSWAAFKISTDGIFDFVITP
                     KQGSGLSHANLYGIP"
BASE COUNT          216 a          312 c          324 g          237 t
ORIGIN      
        1 tcggagccag gccgaattgt gccgcctgcc gcgcgatcgt ggcgcgcaga tggcgcagat
       61 gggtgcgggc gtcgccgata ttggcgcaga ccggtgtgcc gacctcgatc tggcagcgca
      121 ggaattcggg gctgacctga tcgtccagtt cggtcttgca ggcttgcatc agggcatcgg
      181 gcgcctgcgc cagttcgccc gattcggcat caaccagcag atattcttcc tcgatgccca
      241 ggctgaattc gggttcttcc atgacgtggt tgcgctcgca tcgtttgcag aatggtcgat
      301 cgccggcatg aaggagcatc acgttttcgt gaatttccga ctgtgccggt tccgattcac
      361 ctgcacattc gcacgaaaga tcattcgatt tcagcagcca agtgtccggt tcattcttcg
      421 actggaaaat cctgcaatcc tggacgtttg tactgtattt ccgtcgcctc tgggttgtgc
      481 ctggatcgat gcaatcatgt cgacaaggtg cccgacacgc ggtaaacgaa aagaacatgt
      541 gtttttccga tggagaggtt cagttgaaat attggaaaga agccgccgtg ggggccttca
      601 tggccgtggc ggcgtccggc gcctcggctg cgacttgcgg cccagcgacg ggtgacacca
      661 agaccgtcac cgtgacgtcg ggttccgcga ccgtcgaatg ctatgcctac ggctcgggca
      721 acatcaacgg caatgtgaaa caggatccga tcctgaacgg tcagaccacc ggcaaaaata
      781 ccttcacgct ggtgagcggt ccggtcatca ccggactgac tttcctcgac aataccagcg
      841 agtcgggcgg tgcgaaggat ggcggcgtca cctcgaacgg cagttccacc gttggtcaat
      901 ccgtgttcgg aaaggtcacg gtcggagatg tgtcgcccta tagcggcctg atcctggcac
      961 tgaagatcgg caacaagacc tcgctgtcct gggccgcctt caagatttcg acagacggta
     1021 tcttcgactt cgtgatcacg cccaaacagg gcagcggatt gtctcatgcc aatctctacg
     1081 ggatcccga
//
LOCUS       DTVW01000771            1889 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1943510, whole
            genome shotgun sequence.
ACCESSION   DTVW01000771 DTVW01000000
VERSION     DTVW01000771.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1889)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1889)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1889
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1943510"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..597
                     /locus_tag="EYO87_10135"
     CDS             <1..597
                     /locus_tag="EYO87_10135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011455488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HIC66337.1"
                     /translation="KPDAPIAIVLHPHPQYGGTMNNRVVYNLHYAFHNMGFTVMRFNF
                     RGVGRSQGEFDQGIGELSDAASALDYLQAMNPNSKHCWVAGFSFGAWIGMQLLMRRPE
                     ITGFISVSPPANMYDFSFLAPCPSSGLIVNGTADRVAPPKDTHTLVGKLREQKGITIT
                     HEEIEGADHFFRDDETHMNPMIGLVQNYVRRRLTESSR"
     gene            605..1732
                     /locus_tag="EYO87_10140"
     CDS             605..1732
                     /locus_tag="EYO87_10140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005615531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HIC66338.1"
                     /translation="MSDRIARQIAFLCEADRLKTVRRANVLMDLSRSENSAEHSWHAA
                     LWAMVFGGSDRAIAMLLLHDLVEIDAGDQPIHLDHDAAALARAEARAADRIFGLAGDS
                     GDLRGIWAEFEAAASSDANFAKRMDHANPLFQVVSAATPRPDHVRIVQANLNGGRARR
                     LRQDWPEAAAAAEALMRGRAVPDGDLARRLAFLAEADRLKSVYRANTLIDGSRRENSG
                     EHSWHVALYALVLADLAKGAVDIGRVIRMLLIHDLVEIDVGDVPLHSAQGQAHGSPRI
                     QAAEARAARRIFGLLPQDQAAELLALWTEFEAAATPDAVFAKALDRCQPAVQNLRSGG
                     NGWREYAVTLGDIETRVGTRIAAGAPGLWSWLHGEIKGWFG"
BASE COUNT          326 a          597 c          631 g          335 t
ORIGIN      
        1 aagcccgacg cccccatcgc catcgtcctg catccgcatc cccaatacgg cggcacgatg
       61 aacaaccgcg tggtttacaa cctgcattat gcgttccata acatgggctt caccgtgatg
      121 cggttcaatt tccgcggcgt cgggcgtagt cagggcgaat tcgatcaggg gatcggcgaa
      181 ttgtccgatg ccgcctcggc gctggactac ctgcaggcga tgaacccgaa ttccaagcat
      241 tgctgggtgg cggggttcag tttcggcgcc tggatcggga tgcagctttt gatgcgacgc
      301 cccgagatca ccggcttcat cagcgtctct ccgcccgcga acatgtatga tttcagcttt
      361 ctcgcgccct gtccctcgtc ggggctgatc gtcaatggca ccgccgaccg ggtggcgccg
      421 cccaaggaca cccacacact ggtcggcaag ttgcgcgaac agaaggggat caccatcacc
      481 cacgaggaaa tcgagggcgc tgaccacttt ttccgcgacg acgagacgca tatgaatccg
      541 atgatcgggc tggtgcagaa ctatgtccgc cggcgcctga ccgaaagcag ccgctgagac
      601 ggccgtgtcg gatcgtatcg cccgccagat cgcctttctg tgcgaggcgg atcggctgaa
      661 aacggtccgc cgcgcgaatg tgctgatgga cctgtcgcgg tccgagaaca gcgccgaaca
      721 ttcctggcac gccgcgctgt gggcgatggt gttcggcgga tcggaccgcg ccatcgccat
      781 gctgctgctg cacgacctgg tcgagatcga tgcaggcgat caaccgatcc atctggatca
      841 cgatgccgcg gcccttgccc gggccgaagc cagggcggcc gaccgcattt tcgggcttgc
      901 aggcgattca ggcgatttgc gcggaatctg ggccgaattc gaggcggccg cctcgtccga
      961 cgcgaacttt gccaagcgca tggatcacgc caatccgttg tttcaggtcg tctctgctgc
     1021 cacgccgcgg cccgatcacg tccggatcgt acaggccaac ttgaatggcg gccgcgccag
     1081 gcgattgcgg caggactggc ccgaggcggc tgcggccgcc gaagccctga tgcggggccg
     1141 cgccgtgccc gacggcgatc tggcacggcg gctggccttt ctggccgagg ccgatcggct
     1201 gaaatcggtc tatcgggcca atacgctgat cgacgggtcg cggcgcgaga acagcggcga
     1261 acacagctgg cacgtggcgc tttacgcgct ggtcctggcc gatcttgcca agggcgcggt
     1321 cgatatcggc cgggtgatcc ggatgctgct gattcatgat ctggtcgaga ttgatgtggg
     1381 cgacgtgccg ctgcattcgg cccagggtca ggcccacgga tcgccccgga ttcaggcggc
     1441 cgaagcccgc gccgcgcgcc gcattttcgg acttctgccg caggatcagg ccgccgaatt
     1501 gctggcgctg tggaccgagt tcgaggccgc ggcgacaccg gacgcggttt tcgcaaaggc
     1561 cctggatcgc tgtcagccgg ccgtgcagaa cctgcgctcg ggcggaaacg gctggcgcga
     1621 atatgccgtc acgctgggcg atatcgaaac ccgggtcgga accaggattg ccgccggggc
     1681 acccggcctt tggtcatggc tgcatggcga gatcaaggga tggttcggct gagccactca
     1741 gaccaccagc gggcgggcat tggcgttgtg gcgatcgacc aggtggcgtg cacgcttgcc
     1801 ggtggcaaag ggccgcgccg cgggaaaggc gtcgctgcga tcgcgcaaat ccggaaacag
     1861 ggtaaagatt tcttcggcga ccggtccca
//
LOCUS       DTVW01000772            2067 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1945541, whole
            genome shotgun sequence.
ACCESSION   DTVW01000772 DTVW01000000
VERSION     DTVW01000772.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2067)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2067)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2067
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1945541"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..170
                     /locus_tag="EYO87_10145"
     CDS             <1..170
                     /locus_tag="EYO87_10145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012669858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phosphate acetyltransferase"
                     /protein_id="HIC66339.1"
                     /translation="LASGNIGYKIAQRLGRCHAIGPILQGLASPANDLSRGCTPEDIV
                     NAAIITSLTAK"
     gene            289..1560
                     /locus_tag="EYO87_10150"
     CDS             289..1560
                     /locus_tag="EYO87_10150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015930293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HIC66340.1"
                     /translation="MQADNEDPISLWDRTAPADAIAGGMAASADLAIVGAGFTGLSAA
                     LHAAEQGLSVQVIEARRIGHGGSGRNVGLVNAGLWLPPDQVRAALGEEAGSRLIAGLG
                     DAPDLVFSLIERHGIACEASRNGTIHVAHSAAGLADLRDRAWQWQRLGAPVELLSAAE
                     AARRTGTRAFHGGLLDRRAGTINPMGYARGLARAARAAGARIVENVRVTKLTREGPAW
                     RLRSDAGEIRADSVILATNAYSDGLWPGLARSFIPIRFFQLATAPLGDRARSILPGGE
                     GVWDTARVMFSLRRDVAGRLILGSMGSLIGGDAGLSRRWAARRLRVLFPDLGPVEFEA
                     GWDGRIAMTGDHLPRILCPAEGLFIPIGYNGRGIGPGTHVGRGLARHLAGGALSDLPL
                     APSAMPVARGGRAVARFCDAAFAAHQLWRSL"
     gene            1647..>2067
                     /locus_tag="EYO87_10155"
     CDS             1647..>2067
                     /locus_tag="EYO87_10155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008994567.1"
                     /note="catalyzes the formation of UDP-glucuronate from
                     UDP-glucose; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 6-dehydrogenase"
                     /protein_id="HIC66341.1"
                     /translation="MKIAVAGLGYVGLSNAVLLAQRHQVVALDIDAERVASVQARVSP
                     IEDDEIAEFFAGRALNLTATTDPREAMSGADYVIVATPTNYDPRSNYFDTSSVEQVVA
                     MACEMAPDATIVIKSTIPVGFTRSIRDRSGCERILFSP"
BASE COUNT          299 a          650 c          764 g          354 t
ORIGIN      
        1 acctcgcctc gggcaatatc ggctacaaga tcgcccagcg cctcggccgc tgccacgcca
       61 tcggccccat cctccagggc ctcgccagcc ccgccaacga cctctcccgg gggtgcaccc
      121 ccgaagacat cgtcaacgca gcaatcataa caagcctcac cgcaaaatga tcgccgaaaa
      181 cccgatgtcc gggcgcggct gccatgccgg gatcgcgaac gggttttgac agcgccggag
      241 gttccggcga atgtcgcatt cgtgacgcgg cagggggcag gacccggaat gcaggcagac
      301 aatgaggatc cgatctcctt gtgggatcgt accgcgccgg cggatgcgat tgcggggggc
      361 atggcggcct cggccgatct ggccatcgtc ggtgccggtt tcaccgggct ttcggcggcc
      421 ctgcacgcag ccgagcaggg gctgagcgtg caggtgatcg aggcgcggcg gatcggtcat
      481 ggcggttcgg ggcgcaatgt cgggctggtc aatgccggcc tgtggctgcc cccggatcag
      541 gttcgcgccg ccctgggcga agaggccgga agccgcttga tcgccggtct gggggacgcg
      601 cccgatctgg tcttttcgct gatcgaacgt cacggcatcg cctgcgaggc gtcccgaaac
      661 ggcaccatcc atgttgctca ttcggcagcc gggctggccg atctgcgcga ccgcgcatgg
      721 caatggcagc gtttgggcgc acccgtcgaa ctgctgtcgg ccgccgaggc cgcgcggcgg
      781 accgggaccc gcgcctttca cggcggattg ctggatcgcc gcgccggcac gatcaacccg
      841 atgggctatg cgcgcggtct ggcgcgcgcc gcgcgcgcgg ccggggcgcg gatcgtggaa
      901 aacgtccgcg taacgaagct gacgcgcgag ggtccggcct ggcgcttgcg cagcgatgcg
      961 ggcgagatca gggcggattc ggtgatcctg gccaccaacg cctacagcga cggcctgtgg
     1021 ccgggactgg cgcgaagctt catcccgatc cggttctttc agcttgcgac ggcgccgctg
     1081 ggggatcggg cccgttcgat cctgcccggc ggtgagggcg tgtgggatac ggcgcgcgtc
     1141 atgttctcgt tgcggcgcga cgtggcgggg cggctgatcc tggggtccat gggatcgctg
     1201 attggcggcg atgcgggcct gtcgcggcga tgggcggccc ggcggctgcg ggtcctgttt
     1261 cccgatctgg gtccggtcga attcgaggcg ggctgggacg gacgcatcgc catgaccggc
     1321 gatcatctgc cgcgcatcct ttgcccggcc gaggggctgt tcattccgat cggctataac
     1381 gggcgaggca tcggtccggg cacgcatgtc ggacgcggac tggcccggca tctggcgggc
     1441 ggggcgttgt cggatctgcc tctggcgcca tccgcgatgc cggtggcccg gggcggcagg
     1501 gcggtggcgc ggttctgcga tgcggccttt gcggctcatc aattgtggcg atcgctgtga
     1561 ccggcggggc cggggcacgg gatgatggac gccgggcgcg ggctgaccta tgacggatcg
     1621 cgaagtgttg ataaggggtg gacgtgatga agattgccgt ggccggactg ggatatgtcg
     1681 gattgtcgaa cgcggttctg ctggcccagc gtcatcaggt ggtggcgctg gacatcgatg
     1741 ccgagcgcgt cgcgtcggtg caggcgcggg tttcgcccat cgaggatgac gagatcgcgg
     1801 aattcttcgc cggccgggcg ctgaacctga cggcgacgac cgatccgcgc gaagcgatgt
     1861 ccggggccga ttacgtgatc gtggcgacgc ccaccaatta cgatccccgc agcaattact
     1921 tcgacacgtc ctcggtcgaa caggtcgtgg ccatggcgtg cgagatggcg cccgatgcga
     1981 ccatcgtcat caaatcgacg attcccgtgg gctttacccg cagcatccgc gacaggtcgg
     2041 gttgcgagcg gattctgttc tcgccgg
//
LOCUS       DTVW01000773            3524 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1946542, whole
            genome shotgun sequence.
ACCESSION   DTVW01000773 DTVW01000000
VERSION     DTVW01000773.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3524)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3524)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3524
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1946542"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..688)
                     /locus_tag="EYO87_10160"
     CDS             complement(<1..688)
                     /locus_tag="EYO87_10160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012071573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C4-dicarboxylate ABC transporter permease"
                     /protein_id="HIC66342.1"
                     /translation="MEALGYFLTPWLDPKLLFLVAAGTFAGVYVGAIPGLSVTMAVSI
                     LIGFTFTWDVYPALCLMVGIFMGGVYGGSRTAILLNIPGAPSAIATALDGYPLAQKGL
                     AGEAIGISTVMSFVGGLIGIIVLAVAAPAVSDFALTFQPRDFMLLAILGILLVGSLSG
                     ESLVKGIFAGALGLLIGTVGMDPLTAEERFTFGFTQLWGGISFIAVMIGMFGVSEALA
                     QLHHVDKTAVK"
     gene            complement(688..1200)
                     /locus_tag="EYO87_10165"
     CDS             complement(688..1200)
                     /locus_tag="EYO87_10165"
                     /inference="COORDINATES: protein motif:HMM:PF07331.9"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter TctB
                     family protein"
                     /protein_id="HIC66343.1"
                     /translation="MHDKRHRSAGEIAFNAVLFIVSLVLLWSAYAIAGFESLSSPGAL
                     PMAVALAMVVSSGLVLLDGWRHTQRDQTGFLKDILPPAVIVMMLFIAGYALLLVPLGF
                     LPTSLLFLTLSILYLRRGGLIFALGVSAFALLLVYIVFRLIFTVLMPSGIVPEAEMLA
                     AFGQLFGGAR"
     gene            complement(1278..2285)
                     /locus_tag="EYO87_10170"
     CDS             complement(1278..2285)
                     /locus_tag="EYO87_10170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008227000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HIC66344.1"
                     /translation="MTKTLIKFTAVLALTTGLTGTAVLAQDYPAKEIQGIIQWGAGGS
                     TDTVMRTVTPQAEKVLGGKVVMKNMTGGVGAIATKYVYAQKADGYTLLMGAENPLLYK
                     VMGLGDIDYSEFTPINILARGVPILVANNDAPFDTFAEMVEYIQANPNQVKFGSTGPG
                     GVPSVVTALLRSKTELPVTEVPYDGDGPALTALQGGAVDVMPAVLGAAIEGIRGGRMK
                     AISLIDTKPAEALPEVPALGETNPEYADYLPWGPFFGVFVKNGTPEDVVAKLVDAYAK
                     GAESEDFVKLMGDRGYVIESLSGDAATQFLSKWQSLTTWLIADAGLAKKSPEEFGIPR
                     P"
     gene            complement(2405..3334)
                     /locus_tag="EYO87_10175"
     CDS             complement(2405..3334)
                     /locus_tag="EYO87_10175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020041217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HIC66345.1"
                     /translation="MHQLTLRQIEVVRAVMLTGTITGAARMLNVSAPGISRLVKHTEE
                     TLGLRLFERRGGVYVPAAEAGAIFDQIGRVFRGVENLNRAVASLQRGEAVDLSFASAP
                     SVAQFIAARAVRRVRQRFPDLFIDLNILKIEETIDYLMLDRGEFVMMSTAIENAGITN
                     EIAAQGRLAAIVPEGHELAGRDQVSVHDLVRFPMIGVEPNDPYGSVCTRPLRDAGLPV
                     RYSMRGRFAQTVVSLVRHGLGVAIIDEFSVAELYMPGVVRLRLIEEAPITIYVVTKAG
                     RVLSGFAEYAIRQLRRELERATESRPWEQKRAR"
BASE COUNT          695 a         1143 c         1112 g          574 t
ORIGIN      
        1 gcttcaccgc ggtcttgtcg acatggtgca actgcgccag cgcctcgctg acgccgaaca
       61 tgccgatcat cacggcgatg aagctgatcc cgccccaaag ctgggtgaac ccgaaggtaa
      121 agcgttcctc ggctgtcagc ggatccatgc ccacggtgcc gatcagcaac cccagggcgc
      181 cggcaaagat gcccttgacc aggctttcgc ccgacagtga tccgaccagc aggatgccca
      241 ggatcgccag cagcatgaag tcccgaggct ggaacgtcag cgcgaaatcg ctgaccgcgg
      301 gtgccgcgac ggccagcacg atgatgccga tcagcccgcc gacgaaagac atcactgtgg
      361 aaatcccgat cgcctcgccc gccaatccct tctgcgccag cggatagcca tccagcgccg
      421 tggcgatggc cgagggcgcg ccggggatgt tcagcagaat cgcggtgcgc gatccgccat
      481 agaccccgcc catgaagatg ccgaccatca ggcacagcgc cggatagacg tcccaggtga
      541 aggtaaagcc gatcaggatc gacaccgcca tggtgaccga caggccgggg atggcgccga
      601 catagacacc cgcgaaggtg cccgccgcga ccaggaacag cagtttcgga tccagccagg
      661 gggtcaggaa atagccaagg gcctccatta tcgggcccct ccgaacaatt ggccgaaggc
      721 ggccagcatc tcggcctcgg ggacgatccc cgacggcatc agaacggtaa agatcagccg
      781 gaacacgata tagaccagca acagcgcaaa ggccgacacg cccagcgcga agatcagccc
      841 gccccggcgc agatacagga tcgagagcgt cagaaacagc aaagaggtcg gcagaaagcc
      901 cagcgggacc agcagcaggg catatcccgc gatgaacagc atcatcacga tgaccgcggg
      961 cggcaggatg tccttcagaa agcccgtctg gtcgcgctgc gtgtggcgcc agccatccag
     1021 caggaccagg cccgaactga cgaccatggc cagcgcgacc gccatcggca gcgcaccggg
     1081 cgagctgagc gattcgaatc ccgcgatggc ataggccgac cacagcagga ccagactgac
     1141 gatgaacaga accgcgttga aggcgatctc gcccgcgctg cggtggcgct tgtcgtgcat
     1201 gaccgatcct cccgaaggtc attgcaggga ctttcccggc cgcgtgggcc gggaaagatc
     1261 gcatcgcgag ccgcagatca gggccgcggg atgccgaatt cctcgggcga cttcttggcc
     1321 agcccggcat cggcaatcag ccaggtggta agcgactgcc atttcgacag gaactgggtt
     1381 gccgcatcgc ccgacaggct ttcgatgaca tagccgcgat cgcccatcag cttcacgaaa
     1441 tcctcgcttt cggcgccctt ggcataggca tcgacgagct tggcgaccac gtcctcgggg
     1501 gtgccgttct tgacgaagac tccgaagaac ggcccccagg gcaggtaatc ggcatattcg
     1561 ggattggtct cgcccagggc cggaacctcg ggcagggctt cggcgggctt ggtatcgatc
     1621 agcgagatgg ccttcatccg gccgcccctg ataccctcga tggccgcgcc cagcacggcc
     1681 ggcatgacgt ccaccgcgcc gccctgcagc gcggtcagcg ccgggccgtc gccgtcatag
     1741 ggaacctcgg tcacaggcag ttcggtcttg gaccgcagca gcgcggtgac cacggacggc
     1801 acgccgcccg gaccggtcga gccgaacttg acctggttcg ggttggcctg gatatactcg
     1861 accatctcgg cgaaggtgtc gaagggcgcg tcgttgttgg cgaccaggat cggcacgccg
     1921 cgggccagga tgttgatcgg cgtgaattcc gaataatcga tgtcgccgag gcccatcacc
     1981 ttgtagagca acggattttc cgcgcccatc agcagggtat atccatcggc cttctgggca
     2041 tagacgtatt tcgtggcgat cgcgccgacg ccgccggtca tgttcttcat gaccaccttg
     2101 ccgcccagaa ccttctcggc ctgaggcgtg acggtgcgca tgacggtatc ggtcgagccg
     2161 cccgcacccc attgaatgat tccctggatt tccttggcgg gatagtcctg cgccagaacc
     2221 gcggtgccgg tcagtccggt ggtcagcgcc agcacggcgg tgaatttgat cagggtcttg
     2281 gtcatgatgt cctcccttgc tccgggcttt tcccggatct ccatggtccg accatgccaa
     2341 ggtccgacct ttacggcaaa taccaattca tgcggatcgt gaacatgatg ttaatggttg
     2401 cgcctcatcg cgccctcttc tgttcccatg ggcgcgattc ggtggcgcgt tccagttcgc
     2461 gtcgcaactg ccggatcgca tattcggcaa agccggacag aacccggccg gccttggtga
     2521 cgacatagat ggtgatgggc gcctcctcga tcagcctcag ccgcacgacg cccggcatat
     2581 acagttccgc gaccgagaat tcgtcgatga tggcaacgcc aaggccgtgg cggacaaggc
     2641 tgacgacggt ctgcgcaaag cgtccccgca tcgaatagcg caccggcaga ccggcatcgc
     2701 gcagcggcct ggtgcagacc gatccatagg ggtcgttcgg ctcgaccccg atcatcggga
     2761 accggacaag atcgtggacc gagacctgat cgcggccggc cagttcgtga ccctcgggca
     2821 cgatcgccgc cagccggcct tgggccgcga tctcgttggt gatgcccgca ttctcgatcg
     2881 cggtgctcat catcacgaat tcaccgcgat ccagcatcag ataatcaatg gtttcctcga
     2941 tcttcaggat gttcaggtcg atgaacagat cgggaaagcg ctgcctgacc cgcctgacgg
     3001 cgcgggcggc gatgaattgc gcgacggatg gggccgaggc gaaggacaga tccaccgcct
     3061 cgccccgctg caacgaggcc acggcgcggt tgaggttctc gaccccgcga aagacccggc
     3121 cgatctggtc gaagatcgcg cctgcctcgg ccgccgggac atagaccccg ccgcgccgct
     3181 cgaacaggcg cagacccagc gtttcctcgg tatgcttgac gagcctgctg atgccgggcg
     3241 ccgagacgtt cagcatcctg gcggcaccgg tgatcgtgcc ggtcagcatg acggcgcgga
     3301 caacctcgat ctggcgcagg gtcagttgat gcatgggcca atcatccgat gatctgtgct
     3361 cgggcgaaca gaaggtcaga agtcgcgcag aatgtcatgg ggaaagatgg cgcctcgccg
     3421 tgggatcggg caagcgcaag cggcgggatg ttgtcgtggc cttgcccggc acgcggtaac
     3481 cgccgggtta cagatctgca atctgcgcgt cagcccggca tcac
//
LOCUS       DTVW01000774            1634 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1953112, whole
            genome shotgun sequence.
ACCESSION   DTVW01000774 DTVW01000000
VERSION     DTVW01000774.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1634)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1634)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1634
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1953112"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..632
                     /locus_tag="EYO87_10180"
     CDS             <1..632
                     /locus_tag="EYO87_10180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007117477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tricarboxylate transporter"
                     /protein_id="HIC66346.1"
                     /translation="FGKGNPKGIAASESANNAVCGGAMVPMLTFGIPGDPITAIMLGV
                     LVINGIQPGPQLMSDQAGLIAPMLATLLFSAVVLIPLTLYLIGPYFIRIVSVRKDVLY
                     AVITILAVVGSYVSTYSTFQMFMALGMGVLAFHLRRNGFPVITMLLGYILGPNLEEFL
                     RRSLALSNGDPTTFLTNPDSLFFVLLTLVFIYFLVIKKPGKKLAAVPPN"
BASE COUNT          303 a          555 c          488 g          288 t
ORIGIN      
        1 ccttcggcaa gggaaatccc aaaggcatcg cagcctctga aagtgccaac aatgccgtct
       61 gtggcggtgc catggttccg atgctgacct tcgggattcc cggcgatccg atcactgcca
      121 tcatgctcgg cgtcctggtc atcaacggca tccagcccgg cccgcaactg atgtcggatc
      181 aggccgggct gattgccccg atgctggcaa ccctgctttt cagcgcggtc gtgctcattc
      241 ccctgacgct ctatctgatc ggtccgtatt tcatcaggat cgtctccgtc cgcaaggatg
      301 ttctctacgc ggtcatcacc atcctggccg tcgtgggaag ctacgtttcc acctattcga
      361 cctttcagat gttcatggct ctgggcatgg gtgttctggc cttccatctg aggcgcaacg
      421 gctttccggt gatcacgatg ctgctcggct atattctggg ccccaatctt gaggaatttt
      481 tgcggcgatc gctggccttg tccaacggcg atccaacgac tttcctcacg aaccccgaca
      541 gcctgttctt cgtcctgctg acgctggtct ttatctactt cctcgtcatc aagaaaccgg
      601 gcaagaaatt ggcggcggtt ccgcccaact gacgcgcacc tgccttgatg ccttgcgcgc
      661 ccgcccgccg gggaccgtgg cagcctcaga cgatacgatc gaaccccgtg cggcaagact
      721 cgcaagaccg ggttcgttat caggcgatct gtccgggcct caagcttcgc tctgacctga
      781 tgcaggccca aagcgtcagg accgacaagg tggcggaaac gatcagatat ccctggatta
      841 tgatgaacag cgtatcgggg cgggcgaccg gcccataggg cgacaggatc agcggaagaa
      901 cggcccaggc cagggctgga ccagcgaaga tcagcggaac gccgatgagg gcgcggcccg
      961 acaggatcca gcccagcccg ggaaagcctg tcacggctcc gatcgtttcc ggcaagagca
     1021 gtgctgcgat cggaacctgg cgcagccagc gtggtcgcgg cccgtcgtgc cgggccattt
     1081 cggccttgac catgcgccag cctgcggccc gttgcaccgg tgtcgcgcgc catacgaagc
     1141 ccagcaacag cgccgccgca cgggcataga gaaaagcgcc cgcgatgacg cccgaggcga
     1201 agaaccaggc ccaaagcccc ggttgcggtt ctgccccgga acggatcgcc tgtccggctg
     1261 cgatcgctcc ggccagggcg ccaagataat acagcgccac gcccgcgccc atcagtcttg
     1321 ccagacgcag gtcgaattcc ggcgcgggat cggccccgag gatcggacgg ccgatgcgca
     1381 gcatcaggcc ggtcaggatc gtcagaacgc cgcccagcat gttgacctgg gcatgggttc
     1441 gcgcgacggc gacaccggcg ctgcccgcct cgaccatcca gttcttgacc tccggcagaa
     1501 tctgcagcgc gccctgcatc gttcccgcga tcaggatcgc cacgccgagg cagatcaacc
     1561 ccgagcccgc gcgtcgcccg atgccccggg caaagcgcat gacgatggcg cccagcagcg
     1621 accacaggcc gaac
//
LOCUS       DTVW01000775            1346 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1953753, whole
            genome shotgun sequence.
ACCESSION   DTVW01000775 DTVW01000000
VERSION     DTVW01000775.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1346)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1346)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1346
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1953753"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..402)
                     /locus_tag="EYO87_10185"
     CDS             complement(<1..402)
                     /locus_tag="EYO87_10185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011907382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine(20/20a) synthase DusA"
                     /protein_id="HIC66347.1"
                     /translation="MTPRPDPDSQQTIRDAARLSVAPMMDWTDSACRRFHRIMSRRVL
                     LYTEMVTAPAIIHGDPERLLDHEAGEHPLALQIGGSDPAELRQATRIAAGWGYAEINL
                     NVGCPSDRVQSGCFGAVLMKQPDLVADCVAEM"
     gene            complement(604..>1346)
                     /locus_tag="EYO87_10190"
     CDS             complement(604..>1346)
                     /locus_tag="EYO87_10190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004337293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66348.1"
                     /translation="SLARAVLEAEELVYIETPGLARTARPQGTPAPQEIDLIALLAQR
                     MSARPNLKAIIVTPRDGDLIPAPFARRAFAQRKEAYDTLSAAAPGRVAAFHPKGFPGR
                     DALIRSTIVIVDDIWSLTGASHIRRRGMTFDGSAAVASFDRDIARGYSVKVQGQRVAA
                     MAARLGVARMDANGSPVAEFLRLARPASAFSLIRDLLAQNGAGLIQPLWHGPQDNAVL
                     PQDDEVADPDGTNGAPAGLGLAAFLSEA"
BASE COUNT          205 a          451 c          480 g          210 t
ORIGIN      
        1 catctcggcc acgcaatcgg ccacgagatc gggctgtttc atcaggaccg cgccgaaaca
       61 gcccgattgc acgcggtcgc tggggcagcc gacattgaga ttgatctcgg catagcccca
      121 accggcggcg attcgcgtcg cctgtcgcaa ttccgccgga tccgagccgc cgatctgcaa
      181 ggccagcgga tgttcgcccg cctcgtggtc cagcagccgc tcaggatcgc catgaatgat
      241 ggccggggcc gtgaccattt cggtataaag cagcacccgg cgcgacatga tccggtgaaa
      301 acggcggcag gcgctgtcgg tccagtccat catcggcgcg accgacaggc gtgcggcgtc
      361 gcggatggtc tgctggctgt ctgggtcggg gcgcggggtc atcacttgcc ttcgggtatg
      421 gttgcgctgc atgtagcaac cggcggcgcg cttcgcaaac cgtgcacggc aacgccgttc
      481 ccggaggcgg cgggcgacgg atcgtcgggc ctgtggcctt gcagggacat ggatcaaatt
      541 cctgccccgc cgacgagcgg cgggcaccac gcggcgcggc cggcactgga tcccggccgg
      601 cgttcaggcc tcgctcagga atgctgccag tccaagtccg gcgggtgcgc cgttcgtgcc
      661 gtcgggatcg gccacctcgt catcctgcgg cagcaccgca ttgtcctgcg ggccgtgcca
      721 caagggctgg atcagccccg cgccgttctg tgcaagcagg tcgcggatca gcgagaaggc
      781 cgaggccggt cgcgccagtc gcaggaattc cgccaccggc gaaccgttgg catccatccg
      841 cgccacgccc agtcgcgcgg ccatggcggc cacgcgctgg ccctgcacct tgacgctgta
      901 gccgcgcgcg atgtcgcggt cgaacgaggc caccgcggcg ctgccgtcga aggtcatgcc
      961 gcggcggcgg atatggctgg cgccggtcag cgaccagatg tcgtccacga tgacgatggt
     1021 gctgcggatc agtgcgtccc ggccgggaaa acccttcgga tggaaggccg ccacccggcc
     1081 cggcgcggct gcggacagcg tgtcataggc ctccttgcgc tgcgcgaagg cgcgccgggc
     1141 gaagggagcg ggaatcaggt ctccgtcacg cggggtgacg atgatcgcct tcagattggg
     1201 ccgcgccgac atgcgctgcg ccagaagcgc gatcaggtcg atttcctggg gtgcgggtgt
     1261 gccctggggc cgcgccgtgc gggcaagtcc gggggtttcg atatagacca gttcctcggc
     1321 ctccagaacg gcgcgggcca gcgacc
//
LOCUS       DTVW01000776            2138 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1954126, whole
            genome shotgun sequence.
ACCESSION   DTVW01000776 DTVW01000000
VERSION     DTVW01000776.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2138)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2138)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2138
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1954126"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(205..1086)
                     /locus_tag="EYO87_10195"
     CDS             complement(205..1086)
                     /locus_tag="EYO87_10195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007090063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HIC66349.1"
                     /translation="MFGFRDLAIIRAIARHGGFRAASDSLGLAQSAISRRVRHLEDRM
                     GMTIFQRDGRGVRLTAAGRRLVEESEILIAQRDRILGELTQGLMAGVVRLGVAETMTH
                     TVLPRMLTDLRARHPQLRFEISVDTSEQMAQMLVADGLDVAIMMRDQAPRGINLTPLP
                     PVTLGWFVAPAHFDLPRPAGIDDLAALPIVSFPKTTLPHRRVADLLSPGRRQAAAIHG
                     SASLATVLHLVGQGFGIGTIPHDIVDAWPHAGLEEIAVRPEARLPDLDFAICYMPERN
                     EEIGRAVTRAALDAARK"
     gene            1192..1701
                     /locus_tag="EYO87_10200"
     CDS             1192..1701
                     /locus_tag="EYO87_10200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HIC66350.1"
                     /translation="MSQIPHPPDFGPPRIRLRGLEGRDRHDHAAHLLRLSPEDRRARF
                     HAALTDDAIRAYSDGVDWDHALIFGAFVGGVLRGLGELIPWPARDQGEASFSIEQPFQ
                     QIGLGKRLVLATVLAARRAGLGRIHMDFIGDNRAMRALARDVGAVSGRSDGIIHAIKD
                     IPRRGLRAG"
     gene            complement(1770..>2138)
                     /locus_tag="EYO87_10205"
     CDS             complement(1770..>2138)
                     /locus_tag="EYO87_10205"
                     /inference="COORDINATES: protein motif:HMM:PF11972.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66351.1"
                     /translation="PGLPFLPMGRAGQPADEGPPKHRLRRHLAALADGASAALAHLDR
                     VAAWSARAGVETEAIKGSNAARIVAALAAHPLMSTAMVEESCAISRDTAERLLARLER
                     MGLVREATGTRRFRLWAAAI"
BASE COUNT          328 a          766 c          719 g          325 t
ORIGIN      
        1 cagcatcggc aagatcggtc aggaccagct cgacgatatg gtggcccgtc gcggatccgg
       61 gcgcgcagaa tgcgcggatc ggcaagacgg ggctggggtt gcggctgggg ctggatcatc
      121 cggttctcct ctccgacaag gattcctgac gaaaccgatt gaatcaagcg ctcacttatc
      181 cgcaatattg atcgcgcccg gtgatcactt cctcgccgcg tccagtgccg cgcgcgttac
      241 cgcgcgtccg atttcctcat tgcgttccgg catgtagcag atggcaaaat ccagatcggg
      301 cagccgcgcc tcgggccgca ccgcgatttc ctccaggccc gcatggggcc aggcgtctac
      361 gatgtcatgg ggaatcgtgc cgatgccgaa tccctgcccg accaggtgca gcaccgtcgc
      421 cagagaggcc gagccgtgga tcgccgctgc ctgccggcgc cccggcgaca acaaatcggc
      481 tacccgccgg tgcggcagtg tcgtcttggg aaaggacacg atcggcagcg ccgccaggtc
      541 gtcgatcccg gccgggcgcg gcaggtcgaa atgcgcgggc gccacgaacc agcccagcgt
      601 caccggcggc agcggcgtca ggttgatccc gcgcggcgcc tgatcgcgca tcatgatcgc
      661 cacgtccagc ccgtccgcga ccagcatctg cgccatctgt tccgaagtat cgaccgaaat
      721 ttcgaaccgc agttgcggat ggcgcgcgcg cagatccgtc agcatgcggg gcaggaccgt
      781 atgcgtcatc gtctcggcca cgcccagccg cacgacgccc gccatcaggc cctgcgtcag
      841 ttcgcccaga atccggtcgc gctgagcgat caggatctcg gattcctcga ccaggcggcg
      901 gccggcggcg gtcagacgca cgccccggcc gtcgcgttgg aagatggtca tgcccatccg
      961 gtcctccaga tgccgcaccc gtcgcgagat cgccgattgc gccagcccca gcgaatccga
     1021 ggcggcgcga aatccgccat ggcgggcaat ggcgcggatg atggcaaggt cgcggaagcc
     1081 gaacatttcc gcgacatgcg gccgtgggcg acgccaagtc aagcccgccc gcgattgacc
     1141 cgccagcgcc cgcgacccat atgtgccgca gcgaagcatg aggtccgcgc catgtcgcag
     1201 ataccccatc ccccggattt cggtccgccc cgcatccgcc tgcgcgggct ggaaggccgc
     1261 gaccgccatg accatgcagc acacctgctg cggctgtcgc ccgaagaccg ccgtgcccgc
     1321 tttcacgcgg cgctgacgga tgacgcgatc cgcgcctatt ccgacggcgt tgactgggac
     1381 cacgcgctga tcttcggcgc tttcgtgggc ggcgtgctgc gcggtctggg cgagctgatc
     1441 ccatggccgg ctcgggacca gggcgaggcg tccttttcca tcgagcagcc cttccaacag
     1501 atcggcctgg gcaagcggct ggtgctggcg acggtgctgg ccgcgcgccg cgcgggcctt
     1561 ggccgaatcc acatggattt catcggcgac aaccgcgcca tgcgggcgct ggcccgcgac
     1621 gtgggcgcgg tctcgggccg ctcggacggg atcatccatg cgatcaagga cattccccgc
     1681 cgcggcctgc gcgcgggtta gacgggcggt gccggtcggc gcatgccgtt cccgaaaaac
     1741 ggctgtttgc gccggggaat gtcgtcggct cagatcgcgg cggcccacag gcggaaccgg
     1801 cgcgtgccgg tcgcctcgcg cacgaggccc atcctctcca atcgcgccag cagccgctcg
     1861 gccgtgtcgc ggctgatggc gcagctttcc tcgaccatgg ccgtgctcat cagcggatgg
     1921 gcggccagcg ccgccacgat ccgggccgcg ttggacccct tgattgcctc tgtctcgacg
     1981 ccggcgcgcg cggaccatgc cgcgacccga tccagatgcg cgagcgccgc cgaggcgcca
     2041 tcggccagcg ccgccagatg ccgtcgcagg cggtgtttcg gcggcccctc gtcagcgggc
     2101 tgcccggcgc gtcccatcgg caggaacggc aggcccgg
//
LOCUS       DTVW01000777            1041 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1955057, whole
            genome shotgun sequence.
ACCESSION   DTVW01000777 DTVW01000000
VERSION     DTVW01000777.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1041)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1041)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1041
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1955057"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>1041
                     /locus_tag="EYO87_10210"
     CDS             <1..>1041
                     /locus_tag="EYO87_10210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009817859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIC66352.1"
                     /translation="EHRGLDRKAARARALEILKQVRIPEPERRMDQYPHELSGGMRQR
                     VVIAIAMACEPRLLICDEPTTALDVTIQAEILALIDRLKREKQIAVLFITHDMAVVAQ
                     MADRVVVMYRGDKVEEGPVEQIFEAPREDYTRMLLAAVPRLGEMSGKPAPERLRLMRD
                     GTVGKPEPIIVADPKPLLTVENLVTRFAVKGGIMRRTVANVHAVEDVSFTINGGETLS
                     LVGESGCGKSTCGRSILRLVEPQSGHVNLGGTDVLALSQRGLRRARRDMQMIFQDPFA
                     SLDPHMKLYDQVAEPMLNYGIGNRSERQDRIAALFDRVELPRSFMRRYPHEMSGGQRQ
                     RIAIARALALNP"
BASE COUNT          194 a          332 c          339 g          176 t
ORIGIN      
        1 cgaacatcgc ggtctggaca ggaaggccgc ccgcgcccgc gcgctggaga tcctgaaaca
       61 ggttcgcatc cccgaacccg agcggcgcat ggatcagtat ccgcacgaat tgtcgggcgg
      121 aatgcgccag cgggtcgtca tcgccatcgc catggcctgc gagccgcgcc tgctgatctg
      181 cgacgagccg acgaccgcgc ttgacgtgac catccaggcg gaaatcctgg cgctgatcga
      241 ccggctgaag cgtgaaaagc agatcgccgt tcttttcatc acccatgaca tggccgtggt
      301 cgcgcagatg gccgatcgcg tcgtggtcat gtatcgcggc gacaaggtcg aggaaggacc
      361 ggtcgaacag atcttcgagg caccgcgcga agattatacc cggatgctgc tggccgcggt
      421 gccgcgtctg ggcgagatgt ccggcaagcc cgcccccgaa cgcctgcgcc tgatgcgcga
      481 cggaaccgtg ggcaagcccg agccgatcat cgtggccgat ccgaaaccgc tgctgacggt
      541 cgagaacctg gtcacgcgct ttgcggtcaa gggcggaatc atgcgccgga ccgtcgccaa
      601 tgtccacgcg gtcgaggatg tcagcttcac catcaacggc ggtgaaacgc tgtcgctggt
      661 gggcgaatcg ggctgcggca aatcgacctg cgggcggtcg atcctgcgac tggtcgaacc
      721 gcaatcgggc catgtgaacc ttggcgggac cgatgttctg gcgttgtcac agcgcggtct
      781 gcgacgcgcg cgccgcgaca tgcagatgat ctttcaggat cctttcgcca gcctcgatcc
      841 gcatatgaaa ctgtatgatc aggtcgccga gccgatgctg aattacggaa tcggcaatcg
      901 gtccgaacgt caggaccgga tcgccgcttt gttcgaccgg gtggaactgc cgcgcagctt
      961 catgcgccgc tatccgcatg aaatgtcggg gggccagcgc cagcgcatcg ccatcgcccg
     1021 cgccctggcg ctgaacccga a
//
LOCUS       DTVW01000778            1243 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1955258, whole
            genome shotgun sequence.
ACCESSION   DTVW01000778 DTVW01000000
VERSION     DTVW01000778.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1243)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1243)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1243
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1955258"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..944)
                     /locus_tag="EYO87_10215"
     CDS             complement(<1..944)
                     /locus_tag="EYO87_10215"
                     /inference="COORDINATES: protein
                     motif:HMM:PF00356.19,HMM:PF13407.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HIC66353.1"
                     /translation="MQNDARVPTMNDVARTAGVSSATVSRVINGTGKVDKDTRQRVAE
                     AIERLGYTPNFGGRFLAAGRSGTIGAVIPTMANAMFAGGLQAFQEVLAGAGRSLLVAS
                     SGYDPDEELSQIRNLVSRGAEGLLLIGRHRPEASWDYLARRKVPHVVTWAYGTEPGRV
                     YVGFDNRKAAFDLARRVLAFGHRNLAMIGGIGLHNDRARDRVAGARMAVDACPGARLS
                     QVIEAGYDPAEGAAAFRRMMAVADPPSAIICGNDVIAAGAIMAARGNGIAVPAQVSIV
                     GFDDIELAALSCPPLTTVRVPQRRMGQEAATVLLAMVAG"
BASE COUNT          193 a          428 c          409 g          213 t
ORIGIN      
        1 ccggccacca tcgccagcag gacggtggcg gcctcctgtc ccatccggcg ctgcgggacc
       61 cggaccgtcg tcagcggcgg acaggacagc gccgccagtt cgatatcgtc gaaaccgacg
      121 atggacacct gcgcgggcac tgcgattccg ttcccgcggg cggccatgat cgcgccggcg
      181 gcgatgacgt cgttgccgca gatgatcgcg cttggcgggt cggcaacggc catcatccgt
      241 cggaacgcgg cggccccctc ggccgggtcg tagccggcct cgatcacctg cgacagcctt
      301 gcgccgggac aggcatcgac cgccatcctt gcgcccgcaa cccgatcgcg cgcgcgatcg
      361 ttgtgcaggc cgatgccgcc gatcatggcc agattgcggt gcccgaaggc cagcacgcgg
      421 cgggccagat cgaaggcggc cttccggttg tcgaagccga catagacccg ccccggctcg
      481 gtcccgtagg cccaggtgac gacatggggc accttgcggc gggcaaggta gtcccagctt
      541 gcctcggggc gatgccgacc gatcagcagc agtccctcgg cgccgcggct gaccagattg
      601 cggatctgcg acaattcctc gtcgggatca tagccgctgc tggccaccag cagagatcgt
      661 ccggccccgg ccagcacctc ctggaaggcc tgcaacccgc cggcgaacat ggcgttggcc
      721 atcgtcggga tcacggcgcc gatcgtgccg ctgcggcccg cggccaggaa cctgccgccg
      781 aaattgggcg tatagcccag ccgctcgatc gcctcggcca cgcgctggcg ggtgtccttg
      841 tcgaccttgc cggtgccgtt gatgaccctt gaaaccgtcg cggacgagac gccggccgtt
      901 cgggcgacat cgttcatggt gggcaccctg gcatcgtttt gcatgatcgg tcccctctgt
      961 agccgggcct gccccgccgc tgcggcctgc ctgccgccga ccgcaacgga gtaaacgctt
     1021 gcatggcact atgtaagcgc ttacactaca ccgtgagacg aagggaatca accaagaggt
     1081 ctgggaggga cgtcacggtg gttaaactcg gcagatgggc tggatacctg tcgttcgcgg
     1141 ttttcatgct gtttgtcgcg aatgtcgtcg cgggtgcctt ctatcgctcg gcattcctgt
     1201 cagacatcgg cgaaatgctg gtgctgttca cggcctctgc cct
//
LOCUS       DTVW01000779            1607 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1955471, whole
            genome shotgun sequence.
ACCESSION   DTVW01000779 DTVW01000000
VERSION     DTVW01000779.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1607)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1607)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1607
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1955471"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..350
                     /locus_tag="EYO87_10220"
     CDS             <1..350
                     /locus_tag="EYO87_10220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008651130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HIC66354.1"
                     /translation="TREVCLQDYVKFARAKGLSGRRVVLVHVLKNIMIPVVTIIGLEL
                     GSMVAFAIVTETVFAWPGMGKLLIDSINLLDRPVIVAYLMLTVLIIVGINLAVDVIYS
                     LLDPRIRLSEMKG"
     gene            347..1258
                     /locus_tag="EYO87_10225"
     CDS             347..1258
                     /locus_tag="EYO87_10225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014199900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HIC66355.1"
                     /translation="MTDIASPAAPVRIDSPTRRIVKEFLEDPVAVIGLILFILIALIA
                     LAAPWIAPQNPYDLAQLDIMDGALPPGEASFGTGMTYWLGTDQQGRDMLSAIMYGLRV
                     SLMVAMVSLALAITIGTIVGVSAAYFGGRLDSIIMRIVDLQLSFPAILIALILLALLG
                     SGVDKVILALVIVQWAYYARTVRSSAMVERRKDYIDAARCLALSNPRIMFRHLLPNCV
                     PPLIVVATVQIAQAIALEATLSFLGVGVPITEPSLGLLIANGYDYLLSGSYWISIFPG
                     IALVMTIIAINLVGDRLRDVLNPRLQK"
     gene            1255..>1607
                     /locus_tag="EYO87_10230"
     CDS             1255..>1607
                     /locus_tag="EYO87_10230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013722777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIC66356.1"
                     /translation="MTALLDVRNLQTHFFTRDGVAKAVDGVSFSLERGQILGLVGESG
                     SGKSVTGFSILGLVDPPGRVTGGRILFDGDDLVAGGEAALRPLRGKRIAMIFQDPMMT
                     LNPVLRIDTQMIETVR"
BASE COUNT          246 a          523 c          515 g          323 t
ORIGIN      
        1 acacgcgcga ggtctgcctg caggattacg tgaaattcgc ccgcgccaag ggcctgtccg
       61 gccgccgcgt cgtgctggtc catgtgctga agaacatcat gatccccgtc gtcaccatca
      121 tcgggctcga gctgggctcg atggtcgcct tcgccatcgt caccgaaacc gtctttgcct
      181 ggccgggcat gggcaagctg ctgatcgaca gcatcaacct gctcgatcgt ccggtcatcg
      241 tcgcctacct gatgctgacg gtgctgatca tcgtgggcat caacctggcc gtcgacgtga
      301 tctattcgct cctggacccg cgcatccgcc tgtcggagat gaagggatga ccgacatcgc
      361 cagccccgcc gcgccggtgc gcatcgacag cccgaccagg cgcatcgtca aggaattcct
      421 cgaggatccc gtcgccgtca tcgggctgat cctgttcatc ctgatcgcgc tgatcgccct
      481 cgcggcgccc tggatcgcgc cgcagaaccc ctatgacctg gcccagctgg acatcatgga
      541 cggcgccctg ccgcccggcg aggccagctt cggcaccggc atgacctatt ggctgggcac
      601 cgaccagcag gggcgcgaca tgctgtcggc catcatgtac gggctgcgcg tcagtctgat
      661 ggtcgcgatg gtgtcgctgg cgctggcgat caccatcggc accattgtcg gcgtctcggc
      721 cgcctatttc ggcggccggc tggacagcat catcatgcgg atcgtcgatc ttcaattgtc
      781 cttcccggcc atcctgatcg cgctgatcct gctggccttg ctggggagcg gcgtcgacaa
      841 ggtgatcctg gcgctggtga tcgtgcaatg ggcctattac gcgcgcacgg tgcgcagctc
      901 ggccatggtc gagcggcgca aggattatat cgatgccgcg cgctgcctgg cgctgtccaa
      961 tccgcgcatc atgtttcgcc acctgctgcc caattgcgtg ccgccgctga tcgtggtggc
     1021 gaccgtccag atcgcgcagg ccatcgcgct ggaggcgacg ctgtcctttc tgggtgtggg
     1081 cgtgccgatc acggaaccct cgctggggct gctgatcgcg aacggctatg attacctgct
     1141 gtcgggcagc tactggatca gcatctttcc gggcatcgcg ctggtgatga cgatcatcgc
     1201 catcaacctt gtcggcgatc gtctgcgcga tgtcctgaac ccgaggttgc agaaatgacc
     1261 gccctgctgg atgtccggaa cctgcagacg catttcttca cccgcgacgg cgtggccaag
     1321 gcggtggacg gggtcagctt ctcgctggaa cgcgggcaga tcctgggcct ggtgggcgaa
     1381 tcgggatcgg gcaagtcggt caccggcttt tcgatcctgg ggctggtcga tccgccgggc
     1441 cgcgtgaccg gcggccggat cctgttcgat ggcgacgatc ttgtcgccgg cggcgaggct
     1501 gcgctgcgtc ccttgcgcgg caagcgcatc gcgatgatct ttcaggatcc gatgatgacg
     1561 ctgaacccgg tattgcgcat cgacacgcag atgatcgaaa ccgtgcg
//
LOCUS       DTVW01000780            1083 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1955932, whole
            genome shotgun sequence.
ACCESSION   DTVW01000780 DTVW01000000
VERSION     DTVW01000780.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1083)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1083)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1083
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1955932"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1083)
                     /locus_tag="EYO87_10235"
     CDS             complement(<1..>1083)
                     /locus_tag="EYO87_10235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006725389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase family protein"
                     /protein_id="HIC66357.1"
                     /translation="GGNAFDAAVATALVLQVVEPHLNGPAGDLPAIVHLAETGETRVL
                     CAQGVAPKAATMDHYRSLFGDGLIPGSGLLATVVPGAFDGWMLMLRDHGSMEVSEVLA
                     PAIAYARDGHPVLPRVADTIAGLADFFRAEWPSSAATWLPGDAAPQPWSLFRNPDLAA
                     AYQRIADEARGDTRAARIDAARSIWSRGFVADAIGDYLAGASVMDVSGSAHSGVLSRQ
                     DLAEWKATWETTLSLDYHGWTIHKTHSWSQGPVLLQALQILKHFDLAALDPLGADFVH
                     VVAEAMKLAYADREAYYGDPDFFEIPMATLLSEDYAAERAALIGEKASLEQRPGRLPG
                     LEHLADDAIARAAHDFDAARGVSAGEP"
BASE COUNT          190 a          386 c          347 g          160 t
ORIGIN      
        1 cggctcgccg gcgctgaccc cgcgcgcggc atcgaaatca tgcgcggcgc gggcgatggc
       61 gtcgtcggcc agatgctcca gacccggcag gcggccaggg cgctgttcca ggctggcttt
      121 ctcgccgatc agagccgcgc gttccgcagc ataatcctcg gacagcagcg tcgccatggg
      181 aatttcgaag aaatcgggat cgccgtaata ggcctcgcgg tcggcatagg ccagcttcat
      241 cgcctcggcc acgacatgaa cgaaatccgc gcccagcgga tccagcgccg ccagatcgaa
      301 atgcttgagg atctgaagcg cttgcaacag caccggcccc tgtgaccagc tatgggtctt
      361 gtggatggtc cagccatgat aatccagcga cagcgtcgtt tcccatgtcg ccttccattc
      421 cgccagatcc tgccgcgaca gcacgccgga atgcgcgctt cccgagacat ccatcacgct
      481 tgccccggcc agataatcgc cgatcgcgtc ggccacgaaa ccccgtgacc agatgctgcg
      541 ggccgcgtcg atccgggccg cgcgggtgtc gcccctggcc tcgtccgcga tccgctgata
      601 ggcggcggca agatcgggat tgcgaaacag cgaccagggc tgcggcgcgg catcgccggg
      661 caaccaggtg gcggcgctgc tgggccattc cgcgcggaag aaatcggcca gaccggcaat
      721 ggtatcggcc acgcgcggca gcaccggatg gccgtcccgc gcataggcga tggccggtgc
      781 cagaacctcc gacacctcca tgctgccgtg atcgcgcaac atcagcatcc agccatcgaa
      841 ggcgcccggc accaccgtcg ccagcagccc cgatccgggg atcagtccgt cgccgaacag
      901 gctgcggtaa tggtccatcg tggcggcctt cggcgccacg ccctgcgcac agagcacgcg
      961 ggtttcgccg gtctcggcca gatggacgat ggcgggcaga tcgccggccg gtccgttcag
     1021 atgcggctcg accacctgca ggaccagcgc cgtcgccacc gccgcgtcaa aggcattgcc
     1081 gcc
//
LOCUS       DTVW01000781            3433 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1956138, whole
            genome shotgun sequence.
ACCESSION   DTVW01000781 DTVW01000000
VERSION     DTVW01000781.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3433)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3433)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3433
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1956138"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..297
                     /locus_tag="EYO87_10240"
     CDS             <1..297
                     /locus_tag="EYO87_10240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015917624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase"
                     /protein_id="HIC66358.1"
                     /translation="EWIRDDAPYMAMDRMSHARPYAGPAMVLEILLREMELAQTEGGL
                     FQVTMHPHHIGHRSRIFVLEEVIRAVQAKGGAWVATHAEIARYCAREAGLTGST"
     gene            400..1905
                     /locus_tag="EYO87_10245"
     CDS             400..1905
                     /locus_tag="EYO87_10245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007697804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter"
                     /protein_id="HIC66359.1"
                     /translation="MRPRLSVRLLASTLLAAVLAAGPALAQTKELLTIDLPGDPATLD
                     PHLQWNTDSYSVYRNIFDNLVTRNAEGEIVPQIATGWTQDDDTTLTFTIRDDVAFHDG
                     TSLTAEDVAYSINRIIDPDLNSPQLSQFNQIETAEAIDPTTVRITTKSPYPALLAQLV
                     KLSIVPKAYVEAVGDEEFNLKPMGSGPYKLTAWRKGVETELEAFADYWGGQPPFERVL
                     FRAVPDVSTRIADLKTGQADLIRDVPPDQASSVDGASGVKLLSVPTERVGYLYINAQA
                     GPTEDVRVRQAIAYALDRQTLIDALLEGYASPVNILGAPPIFGYTDQIEGYPYDPDKA
                     RALLQEAGAEGATLEFLTSPSYNQAMVQAIQQMLQDVGLDVSISSSDQATFLKRRQGD
                     PENAGSLAIGAWSCACQDADGIIFPLFRTGSIWAKYSNPAFDEAVDAARSTLDEAKRK
                     AEYETAYQILREDVPGLGLYQVYALYGASERLQWQPTANESMFVMDMSWSE"
     gene            1927..2847
                     /locus_tag="EYO87_10250"
     CDS             1927..2847
                     /locus_tag="EYO87_10250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007768723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HIC66360.1"
                     /translation="MLRYIVNRLLQAVIAIFGVLTIVFVVMHLSGDPTLLLVPQDASA
                     EVIANLRRQLGFDRPIGVQYLDYLGDLLRLDFGTSVVQRVPVSQIVAARVPYTIELAA
                     GALAVALGLGIPIGVVMATRRGGWIERGLTAVVVTGQSVPTFLSGILLIAIFGVLLRW
                     LPTSGTGSISALVMPSIALGSVSMATFARMTRIAILDELGKDYVRAATARGMRMDQTI
                     LRHVLRNASIPLITITALEIGNLLAGAVIIETVFAWPGIGLLAIQSIQARDFLVVQMI
                     VLLISVVYVLTSVLADLIYGFVDPRIRLMR"
     gene            2858..>3433
                     /locus_tag="EYO87_10255"
     CDS             2858..>3433
                     /locus_tag="EYO87_10255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007768732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HIC66361.1"
                     /translation="MAIITFPLPRPRLPQMPLSVVLVAILFVVIVVLAVLAPWIAPQD
                     PNDQSLLARLRPPGYTYRDVTYLLGTDDLGRDLLSRVLYGARISLAVSVLSVAVSTVV
                     GVSLGMVAGWYRGWVETLIMRAVDIMMSIPAILLAVLTVAVLGPGFIKLVLVLGLTRW
                     PRYTRVAFGQTLTVAGLPFIRASELAGAGAGR"
BASE COUNT          600 a         1106 c         1081 g          646 t
ORIGIN      
        1 gaatggatcc gcgacgacgc gccctatatg gcgatggacc ggatgagcca tgcccgcccc
       61 tatgccggcc cggcgatggt gctggagatc ctgcttcggg aaatggagct ggcgcagacc
      121 gaaggcggtc tgttccaggt gacgatgcac cctcatcata tcggccaccg ctcgcgtatc
      181 ttcgtgctcg aagaggtcat ccgggccgtg caggcaaagg gcggtgcctg ggtggccacc
      241 catgccgaga tcgcccgcta ttgcgcccgg gaggccgggc tgaccggctc gacctgagcg
      301 caagcggcgg acagcgaagg aaaagacaga accggggcta catccggcaa gaccaaaaag
      361 accaacaaga aacaccgacc aaccaacaga gaggacgcca tgagaccgag actttcagta
      421 aggcttcttg cctcgacatt gctggccgcg gtgcttgccg ccggaccggc gctggcccag
      481 accaaggaat tgctgacgat cgacctgccg ggcgatccgg cgacgcttga tccgcacctg
      541 cagtggaaca ccgacagcta ttccgtctat cggaacatct tcgacaacct cgtgacacgg
      601 aacgccgaag gcgagatcgt cccgcagatc gcgaccggct ggacgcagga cgacgacacg
      661 accctgacct tcaccatccg cgacgacgtc gcctttcatg acggcacgtc cctgacggcc
      721 gaggacgtgg cctattcgat caatcggatc atcgatcccg acctgaacag cccgcagctg
      781 tcgcagttca accagatcga gacggccgaa gcgattgatc cgaccaccgt caggatcacc
      841 acaaagtcgc cctatcccgc gcttctggcg caactcgtca agctttcgat cgtgcccaag
      901 gcctatgtcg aggcggtcgg ggacgaagaa ttcaacctga agcccatggg cagcggcccc
      961 tacaagctga ccgcctggcg gaagggcgtc gagaccgaac tggaagcttt cgccgattac
     1021 tggggcggcc agccaccgtt cgagcgggtg ctgttccgtg ccgtgcccga tgtctcgacg
     1081 cggattgccg atctcaagac cggccaggcc gacctgatcc gcgacgtgcc gccggatcag
     1141 gcatccagcg tcgacggggc aagcggcgtg aagctgctgt cggtgccgac cgaacgggtc
     1201 ggatatctct atatcaacgc gcaggccggg ccgacggaag atgtgcgcgt gcgtcaggca
     1261 atcgcctatg cgctggaccg ccagaccctg atcgatgcgt tgctggaagg ctatgcctcg
     1321 ccggtcaaca ttctcggggc accgccgatc ttcggctata ccgaccagat cgaaggctat
     1381 ccctatgatc cggacaaggc cagggcgctg ctgcaagagg ccggagccga aggcgcgacg
     1441 ctcgaattcc tcacgtcacc ctcgtataat caggcgatgg tccaggcgat ccagcagatg
     1501 cttcaggatg tcgggcttga tgtctcgatc tcgtccagcg accaggcgac cttcctcaag
     1561 cggcggcagg gcgatcccga gaatgccgga tcattggcga tcggggcctg gtcctgcgcc
     1621 tgtcaggatg ccgacggcat catcttcccg ctgttccgca ccggcagcat ctgggccaaa
     1681 tattccaatc cggcattcga cgaggcggtg gatgccgccc gttcgacgct ggacgaggca
     1741 aaacgcaagg ccgaatacga aaccgcctac cagatcctgc gcgaagacgt gcctggactg
     1801 ggcctctatc aggtctatgc gctctatggc gccagcgaac ggctgcagtg gcagccgacc
     1861 gcaaacgagt cgatgttcgt catggacatg agctggtccg aatagcagcc aggggacatc
     1921 agggccatgc tgcgctacat cgtcaatcgc ctgttgcagg cggtcatcgc gatcttcggc
     1981 gtcctcacca tcgtcttcgt cgtgatgcac ctgtcgggcg atccgaccct tctgctggtc
     2041 ccgcaggatg catcggccga ggtgatcgcc aacctgcggc gtcagctggg gttcgatcgg
     2101 ccgatcggcg tgcaatatct ggattacctg ggcgatcttc tgcgtctcga tttcggaacg
     2161 tccgtcgtgc agcgcgtccc ggtatcgcag atcgtcgccg cgcgcgttcc ctatacaatc
     2221 gaactggccg caggcgccct tgcggtcgcc ttgggccttg gcattccgat cggcgtggtc
     2281 atggcgaccc ggcgtggcgg ctggatcgaa cgcggcctga ccgcggtggt tgtgaccggt
     2341 cagagcgtgc cgaccttcct gtccggcatc ctgctgatcg cgattttcgg cgtgctgctg
     2401 cgctggctgc cgacctcggg cacgggcagc atttcggccc ttgtcatgcc gtcgattgct
     2461 cttggttccg tgtcgatggc gacgtttgca cggatgacgc gcatcgcgat cctcgacgaa
     2521 ctgggcaagg attacgtgcg tgccgcgacg gcgcggggaa tgcggatgga tcagaccatc
     2581 ctccggcacg tgcttcgaaa tgcgtcaatc ccgctcatca ccatcacggc gctcgagatc
     2641 ggcaatctgc tggcaggcgc cgtgatcatc gaaaccgtct tcgcatggcc cggcatcggc
     2701 ctgctggcca tccagtcgat ccaggcgcgg gactttctgg tcgtccagat gatcgtgttg
     2761 ctgatttcgg tggtctacgt gctgacaagc gtgctggccg acctcatcta cggcttcgtc
     2821 gatccgcgta tcaggctgat gcggtaggag cagcgacatg gcaatcatca ccttccccct
     2881 gccccggccg cgcctgccgc agatgccgct atcggtcgtc ctggtcgcga ttctgttcgt
     2941 cgtgatcgtg gtgctggccg tgctggcacc ctggatcgcg ccgcaagatc ccaacgatca
     3001 aagccttctc gcgcggctcc ggccgccggg ctacacctat cgcgacgtca cttatcttct
     3061 gggaacggac gatctgggtc gcgacctgct gtcccgcgtg ctttacggtg cccgcatctc
     3121 gcttgccgtg tcggtcctgt cggtcgcggt gtccacggtc gtgggcgtgt cgctgggaat
     3181 ggtggccggc tggtatcgcg gctgggtcga gaccctcatc atgcgcgccg tggacatcat
     3241 gatgtcgatc ccggcgatcc tgctggccgt cctgaccgtg gcggtgctgg ggccgggctt
     3301 catcaagctg gtgctggtcc tgggactgac ccgctggcca cgctacaccc gcgtggcatt
     3361 cggtcagacg ctgaccgtcg cgggacttcc gttcatccgc gcatccgaat tggcgggtgc
     3421 aggcgccggg cgc
//
LOCUS       DTVW01000782            4254 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1956938, whole
            genome shotgun sequence.
ACCESSION   DTVW01000782 DTVW01000000
VERSION     DTVW01000782.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 4254)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4254)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4254
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1956938"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..741
                     /locus_tag="EYO87_10260"
     CDS             <1..741
                     /locus_tag="EYO87_10260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018000401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyC/CorC family transporter"
                     /protein_id="HIC66362.1"
                     /translation="PKAEIIAAPLNVTLNDLVEMFREHGFSRIPVFRGTLDSPLGLIH
                     LKDLALKHGFGTGGKFTLRPMLRPMLYVPPSMPIGVLLQQMQQKRTHMALVIDEYGGV
                     DGLVTIEDLIEQVIGEIEDEHDEAEGRMWIKEKPAQWLIQARAPLNEVEAETGLRLAS
                     DDEDDEIDTLGGLIFMLAGRIPLRGEVIAHDSGVEFEVVEADPRRIKRVRMRAPGATA
                     SAPDAPRKRPAPQNAEQNAEDQIASETG"
     gene            complement(717..1694)
                     /locus_tag="EYO87_10265"
     CDS             complement(717..1694)
                     /locus_tag="EYO87_10265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HIC66363.1"
                     /translation="MPEAAPFHRLPDDDSRPARAFFVTADDGVRLRLAVWDALSGPAA
                     GSILLFPGRTEYIEKYAPIARRLNAAGYAVIAIDWRGQGLSQRLQDDPRPGHIGEFAD
                     YQRDVVEIVVAADDLGLPQPWHLLAHSMGGGIGLAALHADLPVASAVFSAPMWGINLH
                     QMPHRVAMAITALARRLGFEGRSTPGTGAGGTYFLDEAFGTNLLTCDVDEWSRLLREA
                     ATWPDLTIGGASYRWLGLALAECSRLAALPSPALPMLVSLGSDEKIVSQTAIRDRADR
                     WPGAELLEIKGGRHEVMMCLPERRDLFLQAMLAVMETAGARPQPVSDAI"
     gene            complement(1698..1982)
                     /locus_tag="EYO87_10270"
     CDS             complement(1698..1982)
                     /locus_tag="EYO87_10270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCP2 sterol-binding domain-containing protein"
                     /protein_id="HIC66364.1"
                     /translation="MSKVVNAAVEQLNEKIGSFGSTAKFVIEDEGAIMIDESGVRAGD
                     EEAEVTLTANRETFEGILSGDVNPASAFMTGKLKIDGDMGVAMQLGQALS"
     gene            2101..2628
                     /locus_tag="EYO87_10275"
     CDS             2101..2628
                     /locus_tag="EYO87_10275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018000199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66365.1"
                     /translation="MTIFCIGATSFGALAQDGADMEALFSRLADPDSESWRLAESDIL
                     REWSRSGSPAMDLLLKRGEDALDRGDIPAAIGHLTALTDHAPDFAAGFQMRASAYAAA
                     GQYGPAIADLARALELEPRQFAALTQLGGMLEEIGEDERALQAYRASLKIHPHQQEAI
                     DAVARLERAQTGTDI"
     gene            2633..>4254
                     /locus_tag="EYO87_10280"
     CDS             2633..>4254
                     /locus_tag="EYO87_10280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012643927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="disulfide oxidoreductase"
                     /protein_id="HIC66366.1"
                     /translation="MTVIDRGRVTAVLGPTNTGKTHYAIERMLAHRTGVIGLPLRLLA
                     REVYDRIVAARGPSVVALVTGEERIVPERVQYWVATTEAMPDIAADFVAIDEIQLCAD
                     PERGHVFTDRLLQMRGLHETLLLGSDTMRPAIAALVPGVQFQRRERFSTLTWSGSKKL
                     SRMPARSAIVGFSVDDVYAMAELIRRQKGGCAVVMGALSPRTRNAQVAMYQQGEVDYL
                     VATDAIGMGLNLDIRHVAFSATHKFDGRRVRPLFPHELGQIAGRAGRHTEPGTFGVTG
                     EAQPLDEGLTGAIENHRFQPISRLMWRNPALEFGTMDRLVQSLEAASGHELLQRGREA
                     DDLQALKALREMPEIRDRVQGGRDVRLLWDVCRVPDFRGISPTEHTGLLARIFGFLQE
                     GAIPSEWLARAVQRIDRTHGDIDALSKRLAYIRTWTYVAQRTGWVADEKHWRDETRAV
                     EDRLSDALHAALTQRFVDRRTSVLLRRLKQKESLVAEVNDKGEVLVEGEFAGRLEGFR
                     FRPDQTGSADEAKTLNRASYEALRPEFHLRADR"
BASE COUNT          726 a         1390 c         1443 g          695 t
ORIGIN      
        1 cccaaggccg agatcatcgc ggcgccgctg aacgtcacgc tgaacgatct ggtcgagatg
       61 tttcgcgagc acggcttttc gcgcattccg gtctttcgcg gcacgctgga cagcccgctg
      121 gggttgatcc acctcaagga tctggcgctg aagcacggct tcgggaccgg cggcaagttc
      181 accctgcggc cgatgctgcg accgatgctg tacgtgccgc cctcgatgcc catcggggtg
      241 ctgttgcagc agatgcagca gaagcggacc catatggcgc tggtcataga cgaatatggc
      301 ggcgtcgacg gcctggtcac gatcgaggac ctgatcgaac aggtcatcgg cgagatcgaa
      361 gacgagcatg acgaggccga gggccggatg tggataaagg aaaagccggc gcaatggctg
      421 atccaggccc gcgcgccgct gaacgaggtc gaggccgaga ccgggctgcg gctggccagc
      481 gacgacgagg acgacgagat cgacaccctg ggcggcctga tcttcatgct ggccggacgg
      541 attccgttgc gcggcgaggt gatcgcgcat gattcgggcg tcgaattcga ggtggtcgag
      601 gctgatcccc gccggatcaa gcgtgtgcgg atgcgcgcgc ccggcgccac ggcctctgcc
      661 cccgacgcgc cccgcaagcg gcccgcgccg cagaacgccg agcagaacgc cgaggatcag
      721 atcgcgtcgg agaccggctg aggccgcgcc ccggccgttt ccataaccgc cagcatggct
      781 tgcaggaaca gatcgcgtct ttcgggcagg cacatcatca cctcgtgccg cccgcccttg
      841 atctcaagca gttcggcgcc cggccagcgg tctgcgcggt cgcggatcgc ggtctgcgag
      901 acgatcttct cgtcgctgcc cagcgagacg agcatcggca aggcgggcga gggcagggcg
      961 gccagccgcg aacattcggc cagcgccaac cccagccacc ggtagctggc cccgccgatg
     1021 gtcaggtcgg gccaggtcgc ggcctcgcgc agaaggcgcg accattcgtc cacatcgcag
     1081 gtcagcaggt tggtgccaaa agcctcgtcg aggaaatagg tgccgcccgc gccggttccc
     1141 ggcgtcgatc gtccctcgaa cccaaggcgc cgggccagtg ccgtgatcgc catcgcgacc
     1201 cgatgcggca tctggtgcag gttgatgccc cacatcggcg ccgagaatac ggccgaggca
     1261 accggcagat cggcgtgaag cgccgccaga ccgatgccgc cgcccatcga atgggccaga
     1321 agatgccagg gctgcggcag gcccagatcg tcggccgcca cgacgatttc gaccacgtcg
     1381 cgctgataat cggcgaattc accgatatgg ccggggcgcg gatcgtcctg aagccgctgc
     1441 gacaggccct gaccgcgcca gtcgatcgcg atgactgcat agccggccgc gttcaggcgc
     1501 cgggcaatgg gggcatattt ctcgatatat tcggtgcggc cgggaaacag caggatgctg
     1561 ccggcggcgg ggcctgaaag cgcgtcccag accgcaagcc gcaaccgcac cccgtcatcg
     1621 gccgtgacga agaaggcgcg tgccgggcgg ctgtcgtcat cgggcaatcg gtgaaagggt
     1681 gcggcctcgg gcatgatcta ggacagcgcc tgacccagtt gcatcgcaac gcccatgtcc
     1741 ccgtcgatct tcagcttgcc ggtcatgaag gcggaggccg gattcacatc gcccgacagg
     1801 attccctcga aggtttcgcg attggccgtc agcgtgactt cggcctcttc gtcgcctgca
     1861 cggacgccgc tttcatcgat catgatcgcg ccctcgtctt cgatcacgaa tttcgcggtc
     1921 gagccgaagc tgccgatctt ttcgttcaac tgttcgacgg cggcgttcac aactttgctc
     1981 ataatctggc gtctcctcgc gcttggactg gcgcccggcg accgggctgg gtagaatgac
     2041 gatatgcgcg cggcccgatc cgttttccag cctttcgtcg cggcacttcg ccgcgcaacg
     2101 attacgattt tctgcatcgg cgcaacctct ttcggcgccc tggcgcagga tggcgccgat
     2161 atggaggcgc tgttttcgcg tctggccgat cccgacagcg aatcctggcg gctggccgaa
     2221 tccgacattc tgcgcgaatg gtccagatcg ggctctccgg cgatggattt gctgctgaaa
     2281 cgcggcgaag atgctctgga ccggggcgac attcccgccg ccatcggcca tctgaccgcg
     2341 ctgacggacc atgcgcccga tttcgccgcg ggctttcaga tgcgcgcgtc ggcctatgcg
     2401 gcggcgggcc agtacggccc cgcgatcgcc gatctggccc gggctctgga actggaacca
     2461 cgccaattcg ccgccctgac ccaactgggc ggaatgctgg aggaaatcgg cgaagacgaa
     2521 cgcgcgctgc aggcctaccg cgccagcctg aagattcatc cccaccagca agaggccatc
     2581 gatgcggtgg caagactgga acgggcgcag acgggcaccg atatctgatc ccatgacagt
     2641 gatcgacagg ggccgggtga ccgccgtgct ggggcccacc aataccggca agacgcatta
     2701 tgccatcgaa cggatgctgg cgcatcggac cggggtgatc ggcctgccgc tgcgcctgct
     2761 ggcgcgcgag gtctatgacc ggatcgtggc cgcccgcggc ccttcggtcg tggcgctggt
     2821 caccggcgag gagcggatcg tccccgagcg ggtgcaatac tgggtcgcca cgaccgaggc
     2881 catgcccgac atcgccgccg atttcgttgc catcgacgag atccagcttt gcgccgatcc
     2941 cgaacgcggc catgtcttca ccgatcgcct gttgcagatg cgcggcctgc acgagaccct
     3001 gcttctgggc agcgacacga tgcgtccggc catcgccgcg ctggtccccg gcgtgcagtt
     3061 tcagcggcgc gagcggttct cgacgctgac ctggtcgggg tcgaaaaagc tgtcgcggat
     3121 gcccgcgcgg tccgccatcg tgggcttcag cgtcgatgac gtctatgcca tggcggaact
     3181 gatccgacgc cagaagggcg gctgcgcggt cgtcatgggg gcgctgtcgc cgcgcacgcg
     3241 caatgcgcag gtggcgatgt atcagcaggg cgaggtggat tacctggtcg ccaccgacgc
     3301 catcggcatg ggcctgaacc tcgacatacg tcacgtcgcc ttcagcgcaa cgcacaagtt
     3361 cgacggccgc cgcgtccggc cgctgtttcc gcatgaactg ggccagatcg ccggccgcgc
     3421 cggacggcat accgaacccg gcacgttcgg cgtcaccgga gaggcgcagc cgctggacga
     3481 gggtctgacc ggcgcgatcg agaaccaccg ctttcagccg atcagccgtc tgatgtggcg
     3541 caacccggca ctggaattcg gcaccatgga ccggctggtg cagtcgctgg aggccgcgtc
     3601 cggccatgaa ttgctgcagc ggggccgcga ggccgacgac ctgcaagcgc tgaaggcctt
     3661 gcgcgagatg cccgagatcc gcgaccgggt gcagggtggc cgcgatgtcc ggctgttgtg
     3721 ggatgtctgc cgggtgccgg attttcgcgg gatttcgccc accgaacaca ccggcctgct
     3781 ggcgcggatt ttcgggtttc ttcaggaggg cgcgatcccc tccgagtggc tggcgcgggc
     3841 cgtgcagcgg atcgaccgga cgcatggcga tatcgacgcg ctgtcgaaac gtctggcgta
     3901 tatccgcaca tggacctatg tcgcgcagcg gacgggttgg gtcgcggacg aaaaacattg
     3961 gcgcgacgag actcgcgcgg tagaagaccg cctgtcggac gcgctgcacg ccgcgctgac
     4021 tcagagattt gtggaccggc gcacgtccgt gctgctgcgc cggctcaaac agaaggagag
     4081 ccttgtggcc gaagtgaacg acaagggcga ggtgttggtc gagggcgaat tcgccggccg
     4141 tctggagggg ttccgctttc gtcccgacca gaccggatcg gcggacgagg ccaaaacgct
     4201 gaaccgcgcc agctacgagg ctttgcggcc ggaattccat ctgcgcgccg accg
//
LOCUS       DTVW01000783            1004 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1958815, whole
            genome shotgun sequence.
ACCESSION   DTVW01000783 DTVW01000000
VERSION     DTVW01000783.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1004)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1004)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1004
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1958815"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..219)
                     /locus_tag="EYO87_10285"
     CDS             complement(<1..219)
                     /locus_tag="EYO87_10285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005794142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66367.1"
                     /translation="MAKAMIRRAVAAASGLATTGMMASAAMAQDVLGDLPVIGKPQAR
                     GIGFQPASTELARDQRARRALPRSRQRPS"
     gene            424..>1004
                     /gene="tldD"
                     /locus_tag="EYO87_10290"
     CDS             424..>1004
                     /gene="tldD"
                     /locus_tag="EYO87_10290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005851686.1"
                     /note="responsible for the proteolytic maturation of the
                     E. coli pMccB17 plasmid-encoded microcin B17, an exported
                     protein that targets the essential topoisomerase II DNA
                     gyrase; degrades the E. coli plasmid F-encoded CcdA;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease TldD"
                     /protein_id="HIC66368.1"
                     /translation="MTRDRFDPFALYLDRDRALAILREAVSGAEDGELFLERSVSESL
                     VFDDGRLRNSGYTADQGFGLRAVRGEVTGYAHSTEISETSLRRAAQTARLAVGRGGAV
                     LADPAPMRAQHLYAAADPAEGIPISRRIALLREIDDYARSLDPRVVQVTVSLASSLQE
                     IAILRPEGGLVTDIRPMARLNVAVIVENNDRRES"
BASE COUNT          150 a          359 c          318 g          177 t
ORIGIN      
        1 agaagggcgc tgcctgcttc tgggcaaggc gcgccgcgct cgctgatcgc gcgccagttc
       61 cgtcgaggcg ggctgaaagc cgatccccct cgcctgcggt ttgccgatga ccggcagatc
      121 gcccagcaca tcctgcgcca ttgccgcgct ggccatcatt ccagtcgttg ccagccccga
      181 agctgccgcg actgcccggc gaatcatcgc ttttgccatc atcccatccc gttgcgttgg
      241 cccggccgac atggccgcaa gggccgccgg caggccgccc cttttccttt cacagtgacc
      301 gttctatgac catatcttgc gctctcgggc aagtgatacc gagaagatat ctgcgaaagt
      361 gaccgcccgc ccgcgtcttc gcggacgccg gccgcccgcc cgacgaacgg agtttacccc
      421 gccatgaccc gcgacagatt tgacccgttc gccctgtatc tggatcgcga tcgcgccttg
      481 gcgatcctgc gcgaggcggt gtcgggggcc gaagacggcg aactttttct ggaacgttcg
      541 gtctcggaga gcctggtctt cgacgacggg cggctgcgca attccggcta tacagccgac
      601 cagggtttcg ggctgcgcgc cgtgcgcggc gaggtgacag gatacgccca ttccaccgag
      661 atttccgaga catcgctgcg ccgtgccgcc cagaccgcgc gactggccgt gggccggggc
      721 ggcgccgtgc tggccgatcc ggcgccgatg cgggcgcaac acctttatgc cgccgcggac
      781 ccggccgagg ggatccccat ctcgcgccgc atcgccctgc tgcgcgagat cgacgactac
      841 gcccggtcgc tggatccgcg ggtggtgcag gttaccgtct cgctggcctc ctcgctgcag
      901 gaaatcgcca tcctgcgccc cgaaggcggt ctggtcaccg atatccggcc catggcgcga
      961 ctgaatgtcg cggtcatcgt cgagaacaac gatcgccgcg aatc
//
LOCUS       DTVW01000784            1397 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1958927, whole
            genome shotgun sequence.
ACCESSION   DTVW01000784 DTVW01000000
VERSION     DTVW01000784.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1397)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1397)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1397
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1958927"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..252)
                     /locus_tag="EYO87_10295"
     CDS             complement(<1..252)
                     /locus_tag="EYO87_10295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006473975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate kinase 2"
                     /protein_id="HIC66369.1"
                     /translation="MKPKPQSKPKSKARSKAKRNSKTGTSGGKRSKIRNKVYERALFG
                     LQLELIKLQRWIKEAGLKVVVVFEGRDAAGKGGVIKRITE"
     gene            194..406
                     /locus_tag="EYO87_10300"
                     /pseudo
     CDS             194..406
                     /locus_tag="EYO87_10300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014506528.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(535..1374)
                     /locus_tag="EYO87_10305"
     CDS             complement(535..1374)
                     /locus_tag="EYO87_10305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66370.1"
                     /translation="MEHRCQALRLLLGGLGVTGGLGKTEELHSKNSADLWREIRDAGA
                     FLDNGDADGGQIWRLSVAPMDGAGVAQAILAATEGRVFYDWGGGLVWLDLKSSGDAAA
                     EAVRGAVSAVGGHATLVRAAPDSVKAIAAALRKEKLAGVEKEWLRALGAAGADDRGAR
                     KTLLKAASKEKDELLRVNALLALGNLAPGSDRDELLTAALEGDRPREQAAAVCAAAMT
                     RNEHWLEILIALTAATDADAAVSAAAEAAVKVIEGGALSLLAKPIRDAGQDTIARKRI
                     YGG"
BASE COUNT          190 a          506 c          430 g          271 t
ORIGIN      
        1 ctcggtgatg cgcttgatga cgccgccctt gcctgccgcg tcccggccct cgaagacgac
       61 gaccaccttg aggcctgctt ctttgatcca ccgctggagc ttgatcagtt cgagttggag
      121 cccgaacagc gcccgctcgt agaccttgtt gcgaatcttg ctccgcttgc cgcccgatgt
      181 tccggtcttc gaattgcgct tcgctttcga ccgtgccttt gactttggct tcgactgggg
      241 cttcggcttc accttgggtt tcgatttgga cttcgacttg ggcttcggcc ttggcgctgg
      301 tttggacgca ggcttgcgaa ctggcttcgc cctggacttc ggcgctggct tcgacttcgg
      361 cgctggcttg ctgagctttc gcttggccat cgcgccggtg tctctcctgg aagctccgtc
      421 cccatgcctg gcgaggcagg cggaccgacg ctaccacgag gcaacaattg cagctaggcc
      481 gcgcagcaga gcgccatgcg cagcgccctt gtctcgaacg caccgagcat ccggtcagcc
      541 cccgtagatc cgcttgcgcg cgatggtgtc ctggcccgcg tcacgaatcg gtttggccag
      601 cagcgagagc gcgccgccct cgatgacctt cacggcagct tcggcggccg ctgaaacggc
      661 ggcgtcggca tctgttgcag cggtcagcgc tatgaggatc tccagccagt gttcgttgcg
      721 ggtcatggca gcagcacaca ccgcggcggc ttgctcccgc gggcggtctc cctcgagggc
      781 tgcggtcagc agttcatcgc gatcgctgcc gggggcgagg ttgcccagtg cgagcagcgc
      841 gttcacgcgc aacagctcgt ccttttcctt gctcgcagcc ttcagcagcg tcttgcgtgc
      901 acccctgtcg tcggcacctg cggctcccaa ggcgcgtagc cactccttct ccacgccggc
      961 cagcttctcc ttgcgcagag ccgcggcgat ggccttgacc gaatcgggcg cggcgcggac
     1021 cagcgtcgcg tggccgccga cggcggacac cgcaccccgt accgcctcag cggcggcatc
     1081 gccggacgac ttcaggtcca gccagaccag cccgccgccc cagtcgtaaa acacccggcc
     1141 ttcggtggcg gcgaggatcg cctgcgccac cccggcgccg tccatcggcg ccaccgacag
     1201 ccgccagatt tgtcccccgt cggcatcgcc gttgtccagg aacgccccgg catcgcggat
     1261 ttcccgccac aggtcggcgg aattcttcga atgaagctct tccgttttgc cgagaccgcc
     1321 cgtcacaccg agcccgccca acaataggcg cagcgcctgg cagcggtgtt ccaccgacgg
     1381 gcctggccct tcgacgc
//
LOCUS       DTVW01000785            1507 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1961632, whole
            genome shotgun sequence.
ACCESSION   DTVW01000785 DTVW01000000
VERSION     DTVW01000785.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1507)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1507)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1507
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1961632"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..953
                     /gene="trpD"
                     /locus_tag="EYO87_10310"
     CDS             <1..953
                     /gene="trpD"
                     /locus_tag="EYO87_10310"
                     /EC_number="2.4.2.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="anthranilate phosphoribosyltransferase"
                     /protein_id="HIC66371.1"
                     /translation="FAALFDGAATPAQIGGLLMALRVRGETVDEIAAAARAMRKRMNR
                     VHAPAGAMDIVGTGGDGKGTLNISTAAAFVVAGAGVTVAKHGNRNLSSKSGAADALTQ
                     MGINVMGGPAVAQQALDVAGICFMMAPMHHPAMRHVGPPRTELGTRTVFNLLGPLTNP
                     ASVRRQLTGAFSAQWIRPMAEVLRDLGSDAAWLVHGGDGTDELSIAGESHVAALKDGG
                     ITEFTITPEDAGLPRHPFAAIIGGEPRDNAKAFIALLDGAESAYRDAVLLNAAAALLV
                     ADKVADLREGAAMAARSIDSGAARAKLKQLAAVTGPPPET"
     gene            950..>1507
                     /locus_tag="EYO87_10315"
     CDS             950..>1507
                     /locus_tag="EYO87_10315"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017928388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HIC66372.1"
                     /translation="MIPPAPWVHLPFFQQTWPSIRDRLDRADGWLPGPDRLFAALDAI
                     SPHQVRVVILGQDPYPTPGHANGLAFSVAPGIAVPRSLKNIFAELRDDLGAAPATGDL
                     SAWAEQGVLLLNTALSVLPGQAGAHAGWGWQALARDAMAEAQKHGPLAFVLWGAHAQR
                     AASGLPRAQDLVIATAHPSPLSARRG"
BASE COUNT          224 a          532 c          524 g          227 t
ORIGIN      
        1 cctttgcggc gctgttcgac ggcgccgcga cgccggcaca gatcggcggt ctgctgatgg
       61 cgctgcgcgt gcgcggcgag accgtggacg aaatcgccgc cgccgcccgc gccatgcgca
      121 agcggatgaa ccgggtccac gcgccggccg gggcgatgga tatcgtcggc accggaggcg
      181 acggcaaggg cacgttgaac atctcgaccg cggcggcctt cgtggtggcc ggcgcgggcg
      241 tgacggtggc caagcatggc aaccggaacc tgtcctcgaa atcgggcgcg gcggacgcgc
      301 tgacgcagat ggggatcaac gtgatgggcg gtcccgccgt ggcccaacag gcgctggatg
      361 ttgcgggcat ctgcttcatg atggcgccca tgcatcaccc ggccatgcgc cacgtcggtc
      421 cgccgcgcac cgaactgggc acgcgaacgg tgttcaacct gcttggcccg ctgaccaatc
      481 ccgcctcggt ccgccggcag ttgaccggcg cattttcagc gcaatggatc cgccccatgg
      541 ccgaagtgct gcgcgatctg ggttcggatg cggcctggct ggtccatggc ggcgacggca
      601 cggatgaact gagcatcgcg ggcgaaagcc atgtcgccgc cctgaaggat ggcggcatca
      661 ccgaattcac catcacgccc gaagatgccg gcctgccacg ccacccattc gcggcgatca
      721 tcggcggcga gccgcgcgac aacgcgaagg cattcatcgc cctgctggac ggcgccgaaa
      781 gcgcctatcg cgacgccgtt ctgctgaacg cggcggcagc actgctggtg gcggacaagg
      841 tggccgacct tcgcgaaggg gccgcgatgg cggcccgatc catcgacagc ggcgcggccc
      901 gagcaaagct gaaacagctt gccgccgtca ccggcccgcc gcccgaaacg tgattccgcc
      961 ggcgccctgg gtgcatctgc ccttctttca gcagacatgg cccagcatcc gcgaccggct
     1021 ggatagggcg gatggctggt tgcccggccc cgaccggctt tttgcggccc tcgatgcgat
     1081 ttcgccgcat caggtccggg tggtcatcct ggggcaggat ccctacccga cgccgggcca
     1141 tgccaacggg cttgcctttt cggtcgcgcc cggcatcgcc gtgccgcgca gcctgaaaaa
     1201 catcttcgcc gaacttcgcg acgatctggg cgcggccccg gccacgggcg atctgtcggc
     1261 ctgggccgaa cagggggttc tgttgctgaa taccgcgctg tcggtgctgc ccggccaggc
     1321 cggcgcccat gccggatggg gttggcaggc cctggcccgc gacgccatgg ccgaggcgca
     1381 gaaacacggc cccctcgcct tcgtgctctg gggcgcccat gcacagaggg ctgcgtccgg
     1441 cctgccgcgc gcgcaggatc tggtcatcgc caccgcgcat ccttcaccgc tgtcggcgcg
     1501 gcgcggc
//
LOCUS       DTVW01000786            1388 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1962017, whole
            genome shotgun sequence.
ACCESSION   DTVW01000786 DTVW01000000
VERSION     DTVW01000786.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1388)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1388)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1388
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1962017"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..146
                     /locus_tag="EYO87_10320"
     CDS             <1..146
                     /locus_tag="EYO87_10320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019297588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="LPS export ABC transporter ATP-binding protein"
                     /protein_id="HIC66373.1"
                     /translation="NVRETLGIVDRAYILHDGNVLMSGSTQEIVADARVRKVYLGDSF
                     SLA"
     gene            434..1009
                     /gene="raiA"
                     /locus_tag="EYO87_10325"
     CDS             434..1009
                     /gene="raiA"
                     /locus_tag="EYO87_10325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated translation inhibitor RaiA"
                     /protein_id="HIC66374.1"
                     /translation="MRYTISGKHIDVGDALSTHVETELGETVTKYSQRPTDATVTFSR
                     DAHQFLCDSVVHLSTGLTVQARGAAVEIYDAFEACREKMDKQLRRYKRRLKDHHKDRS
                     DPVEFGPAGMYVLSADEDVWETKDSGLQPIIIAEMEARVPTLSVGDAVMQMELAGTPL
                     LVFRNEKHGGVNVVHRRDDGNVGWIDPRGNG"
     gene            1095..>1388
                     /locus_tag="EYO87_10330"
     CDS             1095..>1388
                     /locus_tag="EYO87_10330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS lactose transporter subunit IIC"
                     /protein_id="HIC66375.1"
                     /translation="MQLSEILKPGAVRSLGQVTSKKRLFQELADLANAEYKLNISEVV
                     DALQERESLGPTGVGHGVALPHARLHGLDNVVGLFLRLEKPLDFDAVDRQPVDL"
BASE COUNT          257 a          430 c          456 g          245 t
ORIGIN      
        1 acaacgttcg cgagacgctg ggcatcgtgg atcgcgccta tatcctgcat gacggcaacg
       61 tgctgatgtc cggctcgacg caggagatcg ttgccgacgc gcgggtccgc aaggtctatc
      121 tgggcgacag cttcagcctg gcctgattgc cgttccacgg gacgaccttg aatgcgaagt
      181 ggcggacccg cgatccggac cgcgcttgtg cggcgattgc gggcggcttt cgccgcaaga
      241 cccggccccc gacagcacgc tgctcaccag ctcgtgcggc gcgggtcgtc ggcgatcctc
      301 cgccgccccg ttgacagcca agccgctctg tcaccaaatg ttcaggtggc ggcacggaat
      361 gccgtctcaa acccgggcct ggctttctgc gtcgggcagg cgtgtcagac cgggcaaccg
      421 aagaggaacg acgatgcgct atacgatcag cggaaaacat atcgatgtgg gcgatgccct
      481 cagcactcat gtcgagacgg aactgggcga gacggtgacc aaatattcgc agcggcccac
      541 cgatgcgacc gtcacctttt cccgcgacgc gcatcagttc ctgtgcgata gcgtcgtgca
      601 tctgtccacc ggcctgaccg tgcaggcgcg cggggccgcg gtcgagattt atgatgcctt
      661 cgaggcctgc cgcgagaaga tggacaagca gcttcgccgc tacaagcgcc gtctgaagga
      721 tcatcacaag gaccgctctg atccggttga attcggcccc gcgggcatgt atgtgctgtc
      781 cgccgacgag gatgtgtggg agacgaagga tagcgggctt caacccatca tcatcgccga
      841 aatggaggcg cgtgtgccca cgctttcggt aggggatgcc gtgatgcaga tggaactggc
      901 cggaacgccg ctgctggtgt ttcgcaacga gaaacacggc ggcgtcaacg tcgtccaccg
      961 ccgcgacgac ggcaatgtgg gttggatcga tccgcgcggc aatggctgat cgtcgcccgc
     1021 gacatggctg aaccgacgga ccgcccccgg cgttttcgcg cgggggcgca tccattgaga
     1081 gagacgcaag catcatgcaa ctcagcgaga tcctgaaacc cggcgccgtt cgttctcttg
     1141 ggcaggtcac ctcgaagaaa cggctgtttc aggaactggc cgatctggcc aatgccgaat
     1201 acaagctgaa catctcggag gttgtggatg ctctgcagga gcgcgaaagc ctggggccga
     1261 cgggtgtcgg ccatggcgtc gcgctgcccc atgcccgcct gcacgggctg gacaacgtcg
     1321 tggggctgtt cctgcgcctc gagaaaccgc tggatttcga cgcggtggac cgccagccgg
     1381 tcgatctg
//
LOCUS       DTVW01000787            1156 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1965025, whole
            genome shotgun sequence.
ACCESSION   DTVW01000787 DTVW01000000
VERSION     DTVW01000787.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1156)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1156)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1156
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1965025"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..581)
                     /locus_tag="EYO87_10335"
     CDS             complement(<1..581)
                     /locus_tag="EYO87_10335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009803484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HIC66376.1"
                     /translation="MTGKLDGRVALVTGSGRGIGREIALKLASEGARLVINDLDADPA
                     NETAEALRAMGAEAVVCAGSVTEDGFAERFIKTGMDSFGGLDIIVNNAGYTWDSVVQK
                     MTDEQWQAIIDVHLTAPFRILRAAQPVISAKAKEEAAAGHEVFRKVVNISSIAGTGGN
                     AGQINYSAAKAGILGVTRTMAKEWGRYKVNVNAV"
     gene            complement(606..>1156)
                     /locus_tag="EYO87_10340"
     CDS             complement(606..>1156)
                     /locus_tag="EYO87_10340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016848399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="lipid-transfer protein"
                     /protein_id="HIC66377.1"
                     /translation="ACPPTCGAAAAIICSKEFADKHGLDSSVRIAAQAMTTDGPETFG
                     AHDMREVVGFSMAKRAADQVYEAAGIGPEDVDVVELHDCFAHNELITYEALGLCGRGE
                     AAKFVDDGDNTYGGKYVTNPSGGLLSKGHPLGATGLAQCTELVQQLRGQADARQVDGA
                     RLALQHNLGLGGACVATLYEKA"
BASE COUNT          201 a          379 c          342 g          234 t
ORIGIN      
        1 acggcgttga cgttgacctt gtagcggccc cattccttgg ccatcgtccg ggtgacaccc
       61 aggatgccgg ccttggcggc ggaatagttg atctggccgg cattcccgcc agtgcccgcg
      121 attgacgaga tgttgaccac cttgcggaac acttcatgtc cggcggcggc ctcttccttt
      181 gccttggcgc tgatcaccgg ctgcgcggcg cgcaggatcc tgaagggggc cgtcaggtga
      241 acgtcgatga tcgcctgcca ctgttcgtcg gtcattttct gaacgacgct gtcccaggta
      301 tagcccgcat tgttcacgat gatgtccagc ccgccaaagc tgtccatacc ggtcttgatg
      361 aaccgttcgg caaatccgtc ttcggtgacg ctgccggcac agaccacggc ctcagctccc
      421 attgcgcgca acgcctcggc ggtttcattg gccggatcgg cgtccagatc gttgatcacc
      481 agccgggccc cttccgacgc gagtttgaga gcgatttcgc ggccaatgcc ccggcccgag
      541 cccgtgacca gcgccacgcg cccgtcgagt tttccagtca tattaattcc tcccgaaggg
      601 cgctatcagg ctttttcata aagcgtggcg acgcaggccc cgccgaggcc aaggttgtgc
      661 tgaagcgcca gtcgcgcgcc atcgacctgc cgagcatcgg cctggccgcg aagttgctga
      721 acaagctcag tgcattgcgc aagtccggtc gcgcccagag gatgcccttt ggacaacaga
      781 ccgccagacg ggttggtcac gtacttgccg ccataggtgt tgtcgccatc atcgacaaac
      841 ttcgccgctt cgccgcgacc gcaaaggcca agcgcctcat aggtgataag ctcgttgtga
      901 gcgaaacagt cgtgcagttc gaccacatcc acgtcctcgg gcccgatgcc ggcggcctcg
      961 tagacctgat cggcggcgcg cttggccatc gaaaagccga ccacttcgcg catgtcatgg
     1021 gctccgaaag tttccgggcc gtccgttgtc attgcctgcg ccgcgatccg aacggaactg
     1081 tcgagtccgt gcttgtcggc gaattccttg gaacagataa ttgccgccgc tgcaccacag
     1141 gttggcgggc aggcca
//
LOCUS       DTVW01000788            1863 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1965364, whole
            genome shotgun sequence.
ACCESSION   DTVW01000788 DTVW01000000
VERSION     DTVW01000788.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1863)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1863)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1863
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1965364"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            400..786
                     /locus_tag="EYO87_10345"
     CDS             400..786
                     /locus_tag="EYO87_10345"
                     /inference="COORDINATES: protein motif:HMM:PF12172.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66378.1"
                     /translation="MAETDIFAPWRAALAARELRIPQCSSCGSWNWYPLPSCRVCQAD
                     RFEWRSVAPRGTLYSWTRVHRAFTRRLSMSLPYVVGVVDLEGAPGVRLVCRAAGTVAD
                     PLTGSPVNLSPELDGDEPYWLFEAVD"
     gene            859..1509
                     /locus_tag="EYO87_10350"
     CDS             859..1509
                     /locus_tag="EYO87_10350"
                     /inference="COORDINATES: protein motif:HMM:PF00440.21"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HIC66379.1"
                     /translation="MADETNIGKRRRKKLDKSSEFYRERRAEIIKAAADTFQERGYDG
                     TTLNLIAEKLNADRASLYYYFGSKQDLFREIVREAAYNSVTSAEEIAAKDWPADRKLR
                     EAFETVMQNYESSYPYMHVFMQENFPSMSASEDPWISESRDWATRYYYAIRSIIEQGE
                     RDGIFTLQLPIGVVTMGVLGTVNWAHRWYKPGKRLSSTEIGTGFANMLLSGLTTKA"
BASE COUNT          346 a          553 c          601 g          363 t
ORIGIN      
        1 cattgcatgg ctgcccgcgc ttcccgccgc gtcacgttcg tcgtccgcgg ctttcgcgaa
       61 ggcggggttc ggcccggacg acatggatgt gctggcactt tacgactgct tctcgatcgc
      121 tgttgcgatg caactcgagg ctgtcgggtt ctgcacacct gggcaggccg ctaagcgtgt
      181 cgcgggtggt gcgcttcgcc atgacggggc cttgccggtg aacacgcatg gcggcctaat
      241 ggcgcatggc taccttctcg gcgtgagcca tgtcgccgag atcatcacgc aattgcgcgg
      301 cgaggcgggg gaccgccagg ttccgggtgc acggcggggc tttgcaggcg ccggacccgg
      361 ccgtcaatat acctcgctag tgttcgaaag gctggattga tggccgagac cgacatcttc
      421 gcgccatggc gtgccgctct cgcggcacgc gaattgcgga tcccgcagtg cagcagttgt
      481 ggcagctgga actggtatcc gcttccgtcg tgccgggtct gccaggctga cagattcgaa
      541 tggcggtcgg tcgctccgcg cggaacgctc tacagctgga cccgcgtgca tcgcgcgttc
      601 actcgccgac tgtcgatgtc cctgccctac gttgtcggcg tcgtcgatct ggagggcgct
      661 cccggtgtgc ggcttgtctg ccgcgccgcg gggacggtcg cggatccctt gaccggttca
      721 ccggttaacc tgtcgccgga actggacggg gacgagccgt actggctgtt cgaggcggtg
      781 gactgacagc actccgcctc aaacttgcgc cgaacaagca gccgcctatg atcgcgcggc
      841 acttcgagag gttggacgat ggcggacgaa acgaatatcg gcaagcgcag gcgcaagaag
      901 ctcgacaaga gcagcgagtt ctatcgcgag cggcgtgccg agatcatcaa ggcggcggcg
      961 gacacctttc aggagcgcgg ctacgatggc acgacgctga acctcatcgc cgagaagctg
     1021 aatgccgatc gcgccagcct ttattattat ttcgggtcga agcaggatct gttccgcgaa
     1081 atcgttcggg aagccgcgta taacagcgtc acctcggccg aagagattgc tgccaaggac
     1141 tggcccgcag acaggaagtt gcgcgaagcg ttcgagaccg tcatgcagaa ttacgagtcc
     1201 agctacccct acatgcatgt cttcatgcag gagaacttcc cgtcgatgtc agcgtcggaa
     1261 gatccctgga tctccgagtc tcgggactgg gccacgcgat attactacgc catccgcagc
     1321 attatcgagc agggcgagag ggacggcatc ttcaccctcc agcttccgat cggcgttgtc
     1381 accatgggcg tgctgggcac cgtgaactgg gcgcatcgct ggtacaagcc gggtaaaagg
     1441 ctgagttcca ccgagattgg caccggtttt gccaacatgc tgctgtccgg cctgactacc
     1501 aaggcctgaa ttagccatcc atctgtctgg gcctcctgca ccgcgacgat agtcggcggg
     1561 ccggtgattc acgtcgcgtt tcatcgccgt cgacggaatc gtcaacaagg tagttgacaa
     1621 tttgatgcaa atttccgtag cgtgggcacg ggaggattcc gcatgccgag acccgggaat
     1681 gacgccaccg aaaggctggt cgtcaaacgg aggatctagc gcatccgtaa cgacaagaac
     1741 tcaatcattg ggaggtgaac atgactttga acagaagaca ggtggttgct ggactcactg
     1801 cattcggcgg cctgccgttt gccaccggga tgcggctgtc cgcgcaggac gggtcgatcc
     1861 gga
//
LOCUS       DTVW01000789            1047 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_196876, whole
            genome shotgun sequence.
ACCESSION   DTVW01000789 DTVW01000000
VERSION     DTVW01000789.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1047)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1047)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1047
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_196876"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1047)
                     /locus_tag="EYO87_10355"
     CDS             complement(<1..>1047)
                     /locus_tag="EYO87_10355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017941419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="restriction endonuclease subunit R"
                     /protein_id="HIC66380.1"
                     /translation="PYRQALDEAFDGRVRVFDIADFTHIRPHDIRDHCCIVVGTIQTL
                     RVSNTEGRKVYSHNENMEPHFTALPKTLPGLETLEGGGVKFSFANLMHVHRPLMIVDE
                     AHNAVTGLTREMQSRVNPSAIIEFTATPRLNSNILHSVTAQELKLEEMIKLPIMLSEH
                     DTWQNAVNGAIASRASLAEEAEKDTAYIRPIVLFQAQPKNQEVTVEALKKHLMEVEQI
                     PEHKIAVATGDQRELDGINLFDPKCPIEYVITVEALKEGWDCSFAYAFCSVSRIQSAV
                     DVEQLLGRVLRMPYAKRRKAEDLNRAYAFLSEPSFGEAARSLADKLVAMGFEEDEALD
                     NIEPAQTSLDADNG"
BASE COUNT          177 a          332 c          322 g          216 t
ORIGIN      
        1 aagccgttat cggcatcgag agacgtctgc gccggttcga tgttgtcgag cgcctcatcc
       61 tcctcgaagc ccatagccac cagcttgtcg gccagcgacc gagccgcctc gccgaacgac
      121 ggttccgaca ggaacgcgta ggcgcggttt agatcctcgg ccttgcggcg tttggcataa
      181 ggcatccgca ggacgcgccc cagcaactgc tcgacatcca ccgcgctctg gatccgcgag
      241 accgagcaga acgcataggc gaaggaacaa tcccagccct ccttcagcgc ctcgacggtg
      301 atgacgtatt caatcggaca tttcggatcg aacaggttga tgccatccag ttcgcgctga
      361 tcgccggtag ccacggcgat cttgtgttcg gggatctgct cgacctccat caggtgcttc
      421 ttcagcgcct cgaccgtcac ctcctggttc ttgggctgcg cctggaacag gacgatgggt
      481 cggatgtacg ccgtgtcctt ctcggcttcc tcagccagcg aagcccgtga cgcgatcgcc
      541 ccgttcacgg cgttctgcca ggtgtcgtgc tcagacagca tgatcggcag cttgatcatc
      601 tcctcgagct tcagctcctg cgccgtcacg ctgtgcagga tgttcgagtt gaggcgcggc
      661 gttgccgtga actcgatgat tgccgatggg ttgacgcgtg actgcatttc gcgcgtcagg
      721 ccggtgaccg cgttgtgcgc ttcgtccacg atcatcaacg gccggtggac atgcatcaga
      781 ttggcgaagg agaacttgac gccgccgcct tccagcgttt ccaaccctgg cagggtcttg
      841 ggcagcgccg tgaagtgcgg ttccatgttc tcgttgtggg aatagacctt ccggccctcg
      901 gtgttcgaca cccgcagcgt ctggatcgtg cccacgacga tgcagcaatg gtcgcggatg
      961 tcgtgcgggc ggatatgcgt gaagtccgcg atgtcgaaca cgcgcacccg gccgtcgaag
     1021 gcctcgtcca gcgcctgccg atagggg
//
LOCUS       DTVW01000790            1444 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1969869, whole
            genome shotgun sequence.
ACCESSION   DTVW01000790 DTVW01000000
VERSION     DTVW01000790.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1444)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1444)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1444
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1969869"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(25..942)
                     /locus_tag="EYO87_10360"
     CDS             complement(25..942)
                     /locus_tag="EYO87_10360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011751277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar kinase"
                     /protein_id="HIC66381.1"
                     /translation="MSGLILSIGEAMLELSRSDTRELWRLGIAGDTLNTAWYLRRTLG
                     TDWRVGYLSRVGTGEFSQKMVDFLDADGIETAHVTRDADREIGLYAISLKDGERSFSY
                     WRDNSAARHLADDPETLDTALAGCRIAYLSGITLAILSDAGRDRLLAALKRARASGCR
                     IVFDPNLRPRLWTGAAAMRRWIEAAASGADLVLPSLEDEMTHFGDTDDKATLARYLDL
                     GAGEVVIKNGGEPIRFGGAQGVGVVGDLERATPVDTTSAGDAFNAGYLAASLGGAGPE
                     DAIRAGHALSRKVIAHPGALVREAVAAPD"
     gene            complement(939..>1444)
                     /locus_tag="EYO87_10365"
     CDS             complement(939..>1444)
                     /locus_tag="EYO87_10365"
                     /EC_number="4.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007254663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="mannonate dehydratase"
                     /protein_id="HIC66382.1"
                     /translation="HPDDPPFALLGLPRIMSTEADYAERMAAVDLPANGITLCSGSLG
                     ARPDNDLPGMMDRLGDRVHFLHLRNVRRDGDAIRGSFFEDEHLAGQTDMVALIAAVLR
                     EERRRRRAGRSDAVIPMRPDHGQDILDDLGRDGQPGYPAIGRLKGLAELRGVEAALSH
                     PLTEVPA"
BASE COUNT          238 a          518 c          478 g          210 t
ORIGIN      
        1 aagggccggc aggtcggctg aggatcagtc cggcgccgcg accgcctcgc ggaccagcgc
       61 gccgggatgg gcgatcacct tgcggctcag cgcgtgaccg gcgcggatcg catcctccgg
      121 acccgcgccg ccaaggctgg cggccagata gccggcgttg aaggcgtcgc cggccgaagt
      181 cgtatcgacc ggcgtggcgc gttccagatc gccgaccacg ccgacgccct gtgcgccgcc
      241 gaaccggatc ggctcgccgc cattcttgat gaccacctcg cccgcgccca gatccagata
      301 tcgcgccaga gtcgccttgt catccgtatc gccgaaatgg gtcatctcgt cctcgaggct
      361 gggcaggacc agatcggcgc ccgaggccgc ggcctcgatc cagcggcgca tcgcggcggc
      421 cccggtccac agccggggtc gcaggttcgg gtcgaagacg atccggcagc ccgatgcccg
      481 cgcccgtttc agcgccgcca gcagcctgtc gcgcccggcg tcggacagga tcgccagcgt
      541 gattcccgac agataggcga tgcggcaccc tgccagcgca gtgtccagcg tctccggatc
      601 gtcggccaga tgccgggcgg cggaattgtc gcgccaatag gaaaagctgc gctcgccatc
      661 cttcagcgaa atcgcgtaaa ggccgatctc gcggtcggcg tcgcgggtga catgcgcggt
      721 ttcgatccca tcggcatcga ggaaatcgac catcttctgc gagaactcgc ccgtgccgac
      781 gcggctgaga tagcccacgc gccagtcggt ccccagggtc cggcgcagat accaggcggt
      841 attcagcgta tcgcccgcga tccccagacg ccacaattcg cgcgtgtccg accgcgacaa
      901 ttccagcatc gcctcgccga tggacaggat caggccgctc atgccggcac ctccgtcagc
      961 ggatggctca gggccgcctc gaccccgcgc agttcggcca gacccttgag gcggccgatg
     1021 gcgggatagc ccggctggcc gtcgcgtccc agatcatcga ggatatcctg accgtgatcg
     1081 ggccgcatcg gaatcaccgc atcggaccgc ccggcccgtc gccgccgcct ttcctcgcgc
     1141 agcaccgcgg cgatcagcgc caccatgtcg gtctggccgg ccagatgttc gtcctcgaag
     1201 aaagaacccc ggatcgcgtc gccgtcgcgg cgcacattgc gcaggtgcag gaaatgcacc
     1261 cggtcgccca gccggtccat catgccgggc aggtcgttgt cgggccgcgc gcccagcgat
     1321 cccgaacaca gggtgatgcc attggcggga agatcgacgg cggccatccg ttcggcataa
     1381 tcggcctcgg tcgacatgat ccggggcaga cccagcaagg cgaaaggggg atcgtcggga
     1441 tggc
//
LOCUS       DTVW01000791            1175 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1971041, whole
            genome shotgun sequence.
ACCESSION   DTVW01000791 DTVW01000000
VERSION     DTVW01000791.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1175)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1175)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1175
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1971041"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            106..1077
                     /locus_tag="EYO87_10370"
     CDS             106..1077
                     /locus_tag="EYO87_10370"
                     /inference="COORDINATES: protein motif:HMM:PF01694.20"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HIC66383.1"
                     /translation="MFPIRISVARREIPGAVIALIVANLAVFIFQAGLPPGAARDFTL
                     EYALVPAWFDAAGWTPWPILTNTFMHAGIVHLAVNMWTLWLFGRALEDAFGSLGFLLF
                     YLACGVLASLAHLAFNLGSGIPALGASGAIAGVLGGFTLLHPKARITLVTPILFFPIV
                     YLLPAAVYSALWFTFQIVPGILEMQDGLPQAGIAWWAHIGGLGAGLGLAWLIARTRRK
                     DRLRPGRLSVSNVAGHRPRIIQVGADRNAEPIDGVQRPNVIRLGAPRNRELRRGARRQ
                     GIAQARAAPLPAQLSSVPITHRIAAKVATLVTAPSGSELDIWRRSGR"
BASE COUNT          188 a          373 c          385 g          229 t
ORIGIN      
        1 acgaactgga aaatcgaagg cgacgattgc cagagcggcg cgcgggtccg ggtcaccgca
       61 ctggacggcg ccgtgctgaa agtcgaacag acttaaagcg gcgcgatgtt tccgatccgc
      121 atatccgtcg cacgccgtga aattcccggc gccgtcatcg cgctgatcgt cgccaatctg
      181 gccgtgttca tcttccaggc cggactgccg ccgggtgcgg cgcgtgattt caccctggaa
      241 tacgcgctgg tgccggcctg gttcgacgct gcgggctgga cgccgtggcc aatcctgacc
      301 aatactttca tgcacgccgg gatcgtccat ctggccgtca atatgtggac tttgtggctg
      361 ttcgggcggg cgctggaaga cgccttcggg tcgctggggt tcctcctctt ctatctggcg
      421 tgcggcgttc tggccagcct ggcccatctg gccttcaatc tgggctcggg catcccggcg
      481 ctgggcgcat cgggcgccat cgccggggta ctgggcggct tcacgctgct gcatcccaag
      541 gcccgcatta ccctggtcac gccgatcctg ttctttccga ttgtctattt gctgccggcg
      601 gcggtctata gcgcgctgtg gttcacgttc cagatcgtcc ctggcattct cgaaatgcag
      661 gatgggttgc cgcaagccgg gatcgcctgg tgggcccata tcggcgggct tggcgccggg
      721 ctggggctgg cctggctgat cgcccggacc aggcggaagg accggcttcg ccccggccgg
      781 ctgtcggtca gcaacgtagc ggggcaccgg ccccggatta ttcaggttgg cgccgaccgg
      841 aacgccgagc cgatcgacgg cgttcagcgc cccaatgtca ttcgcctcgg cgcgccgcga
      901 aatcgcgaac tgcggcgtgg cgcgcgacgg caaggcattg cacaagccag ggccgcaccg
      961 ctgccggcgc aattgtcgag cgttcccatc acccatcgca tcgcagcgaa agtggcaacg
     1021 cttgtaacgg caccgagcgg atcggaactg gacatctggc ggcggtccgg acggtaagct
     1081 atagcaagga cacctgttta ttcatacgga gtgcggccaa tgacctatac gaccggaatt
     1141 ttgctgttcg accagctgga ggaactcgat gccat
//
LOCUS       DTVW01000792            3464 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1974137, whole
            genome shotgun sequence.
ACCESSION   DTVW01000792 DTVW01000000
VERSION     DTVW01000792.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3464)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3464)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3464
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1974137"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..458
                     /locus_tag="EYO87_10375"
     CDS             <1..458
                     /locus_tag="EYO87_10375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009506336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HIC66384.1"
                     /translation="GSKGTLVMFICNHCPYVQAVLDRIVRDAKEMQAAGIGVVAISAN
                     DVVEYPGDGPKQMKAEAEKHGFSFPYLYDKSQDTARAYGAECTPDFFGYNADGRLQYR
                     GRLDSSTRQAGPADAKRELRDAMMMIAKTGKGPVNQVPSMGCSIKWKSA"
     gene            455..1135
                     /gene="gph"
                     /locus_tag="EYO87_10380"
     CDS             455..1135
                     /gene="gph"
                     /locus_tag="EYO87_10380"
                     /EC_number="3.1.3.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011750257.1"
                     /note="PGP is an essential enzyme in the glycolate salvage
                     pathway in higher organisms (photorespiration in plants).
                     Phosphoglycolate results from the oxidase activity of
                     RubisCO in the Calvin cycle when concentrations of carbon
                     dioxide are low relative to oxygen. This enzyme is a
                     member of the Haloacid Dehalogenase (HAD) superfamily of
                     aspartate-nucleophile hydrolase enzymes (PF00702); Derived
                     by automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycolate phosphatase"
                     /protein_id="HIC66385.1"
                     /translation="MNVCMAPCPIVFDLDGTLIDSAPDIHACVNAVLRQNRLAPLGQD
                     RVRSFIGGGVDLLWTRIIAALRIDPAYRSDLIASFMTRYHDATALTRLFPGVVEALGT
                     LADRGHALGICTNKPMGPTRAILDHFGIAGSFAHVTSGDCLPQKKPDPAPLRAALAAL
                     GADPAQPRAIYVGDSEFDARCAAAIQVPFLIYTKGYRLKPVADLPHDAAFDDFAALPA
                     LIETRVMV"
     gene            1211..1639
                     /locus_tag="EYO87_10385"
     CDS             1211..1639
                     /locus_tag="EYO87_10385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017997940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01244 family phosphatase"
                     /protein_id="HIC66386.1"
                     /translation="MDLRQLSHSIAVSPQITPEDVPQLAEAGFRVLINNRPDAEVDSS
                     LDHEVMAAAAEKEGMEYHYLPFSPGQITPELITDFAQATAGRGPIIAYCRSGHRCTVL
                     WALSQAGKRPRAEIIDVARDAGYDLTPVLPLIDSLASRRG"
     gene            complement(1654..1980)
                     /locus_tag="EYO87_10390"
     CDS             complement(1654..1980)
                     /locus_tag="EYO87_10390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011750275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66387.1"
                     /translation="MYGLGHCSTCQKAIAALEDHGWRVNFRDVQKEPLSEAERAGLVK
                     DFGDRIVNRASLTWRGMSEEERAADPVAMMEARPAVMKRPAILAGDKRLLGWTANVKR
                     ALDVPA"
     gene            complement(2130..3437)
                     /locus_tag="EYO87_10395"
     CDS             complement(2130..3437)
                     /locus_tag="EYO87_10395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_353311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3422 domain-containing protein"
                     /protein_id="HIC66388.1"
                     /translation="MGPATEHPLRYALVNELHARPSPRLKAPSTCVFVAFKEPRDAAN
                     RDLARDMAHLSELVDRHGGPRPDPDESHYQGRLGRHDLKWESHTEFVTYMATTPGLPI
                     RPFDPSAAAIFSEEWQKGAPGRRVAAVMVQIDTLPAHPQEALDRISDWFARDSLTAVW
                     VLEEAAMIAGDFRIDADGWMRFAIFVRPDVGEGRIGRIVHRLVELETYRAMSMLGLGR
                     ARGLSRRLNELEPRLSAIVDGMTDDDRAADAVLHDLLAVSAELEAQAVQHSFRFGATK
                     AYEAIVMDRVSALRETRFMSRQMLTEFMRRRYQPAMRTVVSNEERLKTMVERARRAGD
                     LLRTRVDVERSAQNQALMKRMDRRADLQLRLQHTVEGLSVVAISYYAVGLLSYALYPL
                     ANATGIDKAYLIAGLTPLAVLFVWWAMRRVRRSLHQHPPEEDL"
BASE COUNT          641 a         1110 c         1077 g          636 t
ORIGIN      
        1 agggctcgaa gggcacgctg gtcatgttca tctgcaacca ttgcccctat gtgcaggcgg
       61 ttctcgatcg catcgtgcgc gacgcgaaag agatgcaggc ggccggtatt ggcgttgtcg
      121 cgatctcggc caatgatgtg gtcgagtatc ccggcgacgg tcccaagcag atgaaggcag
      181 aggccgaaaa acacggtttc agctttccct atctttacga caagagccag gatacggccc
      241 gcgcctatgg tgcggaatgc actccggatt tcttcggcta caacgcggat ggcaggttgc
      301 agtatcgggg ccggctggat tcctcgacac ggcaggctgg tcccgcggat gcgaaacgcg
      361 aattgcggga cgcgatgatg atgattgcca agacaggaaa aggaccggta aatcaggtgc
      421 cttcgatggg atgttcgatc aagtggaaat ccgcatgaac gtctgcatgg cgccatgccc
      481 gatcgttttc gaccttgacg gcacgctgat cgacagcgct ccggacatcc atgcatgcgt
      541 caatgcggtc ctgcgtcaaa atcggttggc gccgctgggc caggatcggg tgcgcagttt
      601 catcggcggt ggtgtggacc ttctttggac caggatcatc gccgcgctga ggatcgatcc
      661 ggcgtacaga tcagatctga tcgcatcctt catgacccgc tatcacgacg cgaccgcgct
      721 gacgcggctg tttcccgggg tggttgaggc gcttggcacg ctggccgacc gcgggcatgc
      781 tctggggatc tgcaccaaca agccgatggg gccgacgcgc gcgattcttg atcattttgg
      841 aattgcgggg tccttcgccc atgtcaccag cggcgattgc ctgccccaga agaagcccga
      901 tcccgcgccg ctgcgggccg cgcttgccgc gcttggggcc gatccggctc agccgcgcgc
      961 aatctatgtc ggtgacagcg aattcgacgc cagatgcgcc gcggcgatac aggtgccgtt
     1021 cctgatctac accaaaggtt atcgcctgaa gccggtcgca gatttgcccc acgatgctgc
     1081 cttcgacgat ttcgctgccc tccccgccct gatcgagacg cgcgtgatgg tctgagccgg
     1141 cacgagccgg gcgcttgaca aaagccgttc cgtcgcgcca tgtctcggca ttcccagcaa
     1201 gaggcagttc atggacctgc gccaactcag ccacagcatc gcggtctcgc cgcagatcac
     1261 gcccgaggat gtgccgcaac tggccgaggc cggatttcgc gtgctgatca acaatcggcc
     1321 cgacgccgag gtggactcgt cccttgacca cgaggtcatg gcagcggcag cagagaagga
     1381 gggaatggaa taccactacc ttcccttctc acccggccag atcacaccgg aactgatcac
     1441 cgatttcgcg caggcaaccg caggccgcgg cccgatcatc gcctattgcc ggtccggcca
     1501 cagatgcacc gtgctatggg cgctgagcca ggccggaaag cgccctcggg ctgaaatcat
     1561 cgatgtggcc cgcgacgcgg gctatgacct gacgccggtt cttccgctga tcgattcgct
     1621 ggcaagcagg cgcggctgat ccgcgatcct ggctcaggcg ggcacgtcca gcgcgcgctt
     1681 gacgttcgcc gtccagccca gtagccgctt gtcgcccgca aggatggccg gacgcttcat
     1741 cacggcgggt ctggcttcca tcatcgcaac cggatcggcg gcgcgttctt cctcggacat
     1801 gccgcgccat gtcaggctgg cgcgattcac gatccgatcg ccgaaatcct tgaccagacc
     1861 ggccctttca gcttcggata aaggttcttt ctgcacgtcg cggaagttta ctcgccagcc
     1921 atgatcttcc agtgcggcaa ttgctttctg gcaggtcgaa caatggccca gcccatacat
     1981 ttgcagtgtt ttcgacatgg cggaaacctc ggctcaggga acgaagggat agtcgcaggc
     2041 cgaaagcatc gtgattacgg cggcaagacg catgaaaacc ttcggaaaac gacggtccga
     2101 ttatcgtcac gccctgccct gtcggcaagt cacaaatcct cttccggcgg gtgctggtgc
     2161 aagctgcggc ggacccgccg catcgcccac cagacgaaca gcaccgcaag cggcgtcagt
     2221 ccggcgatca gataggcctt gtcgatgcct gtcgcgttgg ccagtggata caatgcatag
     2281 gacagaagtc cgaccgcgta atagctgatg gcgacgacgg acaggccctc gacggtatgt
     2341 tgcaggcgca attgcagatc ggcgcggcga tccatccgtt tcatcagcgc ctggttctgg
     2401 gccgaacgtt ccacatcgac ccgcgtccgc agcagatccc cggcccgtct ggcgcgttcc
     2461 accatggtct tcaaccgttc ttcattcgac accacggtgc gcatcgcggg ctgatagcgg
     2521 cggcgcatga attcggtcag catctgccgg ctcatgaagc gcgtctcgcg cagggcgctg
     2581 acgcggtcca tcacgatcgc ctcataggcc tttgttgcgc cgaagcgaaa ggaatgctgc
     2641 accgcctgtg cctcgagctc ggccgagacg gccagaagat cgtgcagcac cgcgtcggct
     2701 gcgcggtcgt catcggtcat cccgtcgaca atggccgaca ggcgcggttc cagttcgtta
     2761 aggcggcgcg acaggccgcg ggcgcgcccc aggcccagca tggacatggc gcgataggtt
     2821 tccagctcga ccaggcggtg cacgatgcgc ccgatcctgc cctcgcccac gtcaggacgc
     2881 acgaaaatgg caaagcgcat ccagccatcc gcgtcgatac ggaaatcgcc cgcgatcatc
     2941 gcggcttcct cgagcaccca gacggcggtc aggctgtcac gcgcgaacca gtccgaaatc
     3001 ctgtccagcg cctcttgcgg atgcgcgggc agcgtgtcga tctgaaccat caccgccgcg
     3061 acccgcctgc ccggcgcgcc cttctgccat tcctcggaaa agatggcggc ggccgacgga
     3121 tcgaagggac ggatcggcag gcccggcgtc gtggccatgt aggtcacgaa ttcggtgtgg
     3181 ctttcccatt tcaggtcatg ccggcccaac cggccctgat agtgactctc gtcgggatcg
     3241 ggtcgcggac cgccatggcg atccaccagt tccgacagat gcgccatgtc gcgcgcgaga
     3301 tcgcgattgg cggcgtcgcg cggctccttg aaggccacga agacacaggt ggacggcgcc
     3361 ttcagacgag gcgagggacg ggcatgaagt tcgttcacca gcgcatagcg caacggatgt
     3421 tcggttgccg ggcccacgcc gttctccttt agctgcggct gccg
//
LOCUS       DTVW01000793            1104 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1974310, whole
            genome shotgun sequence.
ACCESSION   DTVW01000793 DTVW01000000
VERSION     DTVW01000793.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1104)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1104)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1104
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1974310"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..366)
                     /locus_tag="EYO87_10400"
     CDS             complement(<1..366)
                     /locus_tag="EYO87_10400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010236414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF885 domain-containing protein"
                     /protein_id="HIC66389.1"
                     /translation="MTIRRLLTGAAALAILTALGSAFAQDNSEAARADAEANWDAANF
                     ETAQAEHDKLFALFADSDARSLELNPLSRLFRGDDTNADRLGDYLTDASYYASLRDTQ
                     LNVALLDQIDRAKLSPTDRL"
     gene            complement(470..>1104)
                     /locus_tag="EYO87_10405"
     CDS             complement(470..>1104)
                     /locus_tag="EYO87_10405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010236417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HIC66390.1"
                     /translation="VLSQQGRGLEAHFSDAEMKAIAETAHSLGLKVMAHAHGARGIEA
                     ASRAGIDTIEHGTYLDEAAARAMRENGTVLVPTLMAFQGVTERLGKGIYTPVVEDKIR
                     AVAETARVFMGKALRWNVPIAFGTDAGVFAHGRNAGEFALMRAQGMTDRQALASATTI
                     AAQVLEMEGEIGRLAPGYSADIIAVDGNPLEDVTVLEKVDFAMVRGRVIE"
BASE COUNT          181 a          383 c          349 g          191 t
ORIGIN      
        1 aagccggtcc gtcggcgaga gcttggcgcg gtcgatctgg tcgagaagcg cgacgttgag
       61 ctgcgtatcg cgaagcgagg cgtaatagct cgcatcggtc aggtagtcgc ccagccggtc
      121 cgcattggtg tcgtcgccgc gaaacaggcg gctgagcgga ttgagttcca gactgcgcgc
      181 atcggaatcg gcgaacagcg cgaacagctt gtcgtgttcg gcctgcgcag tctcgaaatt
      241 ggcagcgtcc caattggcct ccgcgtccgc ccttgcagcc tccgagttgt cttgcgcgaa
      301 ggcactgccc agcgcggtca ggatggcaag cgcggcggcg ccagtcagca ggcgacggat
      361 agtcatgtcg gtagtctccc ccaggaatat catcgcgcga cggtaggccg ggccaagatg
      421 cccgccaatc gccttctgca aaggccagcg gccaatcgac gaacgtcggc tattcgatca
      481 cccggccacg caccatcgcg aagtcgacct tctccagcac cgtcacatct tccagcggat
      541 tgccgtcgac cgcgatgatg tccgcagaat agcccggagc gaggcgaccg atctcgcctt
      601 ccatttccag cacctgcgcg gcgatagtgg tggcgctcgc cagcgcttgc cggtcggtca
      661 tgccctgtgc gcgcatcagc gcgaattcgc ccgcgttgcg gccatgcgcg aacacgcccg
      721 catcggtgcc gaaggcgatc ggcacgttcc agcgcagcgc cttgcccatg aagacgcgcg
      781 cagtttcggc cacggcgcgg atcttgtcct ccaccacggg ggtgtagatg cccttgccca
      841 gccgctcggt cacaccctgg aacgccatca gcgtggggac cagcacggtg ccgttctcgc
      901 gcatcgcgcg cgccgccgcc tcgtccagat aggtgccatg ctcgatcgta tcgattccgg
      961 cgcggctcgc cgcctcgatc ccgcgcgcgc catgcgcatg ggccatcacc ttgaggccga
     1021 gcgagtgggc ggtctcggca atcgccttca tctctgcatc gctgaaatgc gcctccagcc
     1081 cgcgcccctg ctggctgagc acgc
//
LOCUS       DTVW01000794            1040 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1975955, whole
            genome shotgun sequence.
ACCESSION   DTVW01000794 DTVW01000000
VERSION     DTVW01000794.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1040)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1040)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1040
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1975955"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..560
                     /locus_tag="EYO87_10410"
     CDS             <1..560
                     /locus_tag="EYO87_10410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008558490.1"
                     /note="Catalyzes the deamination of guanine; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="guanine deaminase"
                     /protein_id="HIC66391.1"
                     /translation="ARDYLDIYETYGLLSEKLLLGHSIHLRPREITRMAETGSRAVFC
                     PTSNLFLGSGLFDEAGLRTAGIACGIATDIGGGTSYSMLQTLNEGYKILQLRGQKLHP
                     LAAFHWVTRGNAQALGFQDEIGTLAAGSAADLVVLDSCATPAMALRAQRAGTLAEELF
                     ILQIMGDDRAVAQTYVAGKPMKSAD"
     gene            620..>1040
                     /locus_tag="EYO87_10415"
     CDS             620..>1040
                     /locus_tag="EYO87_10415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013593398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5-phosphate oxidase"
                     /protein_id="HIC66392.1"
                     /translation="MTRGARVFYPLASTTWDDAECRALQRVIVSGRHTMGPEVAAFET
                     AFAARVGSQHAVMASSGSAANLLALAAAFWHPDLDWRAGDEVIVPAVSWSTTYFPVTQ
                     TGLKLRFVDVEASTLNIDPDLACAAITPRTRAILAVNL"
BASE COUNT          165 a          361 c          343 g          171 t
ORIGIN      
        1 acgcccgcga ctacctggac atctacgaaa cctacggcct gctttcggaa aaactgcttc
       61 tgggccattc catccacctg cgcccgcgcg agatcacccg catggccgaa accggcagcc
      121 gcgccgtctt ctgcccgacc tcgaacctgt ttctcggctc gggcctgttc gacgaggccg
      181 ggctgcggac ggcggggatc gcctgcggca tcgctaccga tattggcggc ggcaccagct
      241 attcgatgct gcagaccctg aacgagggct acaagattct gcaactgcgc gggcagaagc
      301 tgcatcccct ggcggccttc cactgggtca cgcgcggcaa tgcgcaagcc ctgggctttc
      361 aggacgagat cggcacgctg gccgccggca gcgccgccga tctggtcgtt ctggacagct
      421 gcgcgacgcc ggcgatggcg ctgcgcgccc aacgcgccgg aacgctggcc gaggaattgt
      481 tcatccttca gatcatgggc gacgaccgcg ccgtggcgca gacctatgtc gcgggcaagc
      541 cgatgaaatc ggcggactag atcaaatccc gcgcggccgc ttggcggggg cggcgccttc
      601 ggctatggct gggcgcagca tgaccagagg cgcgcgcgtg ttctatcccc ttgccagcac
      661 gacctgggac gatgccgaat gccgggcgct gcaacgcgtc atcgtctcgg gtcggcacac
      721 gatgggcccc gaggtcgcgg ccttcgaaac cgcctttgcc gcgcgtgtcg gcagccagca
      781 cgcggtgatg gcctcgtcgg gatcggccgc gaacctgctg gcgctggcgg cggccttctg
      841 gcaccccgat ctggactggc gcgccggcga cgaggtgatc gtgcccgcgg tcagctggtc
      901 cacgacctat ttcccggtga cgcagaccgg cctgaaactg cgcttcgtgg atgtcgaagc
      961 gtccacgctg aacatcgatc ccgatctggc ctgcgccgcg atcacgccac ggacacgcgc
     1021 gatcctggcg gtgaacctgc
//
LOCUS       DTVW01000795            6790 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1975971, whole
            genome shotgun sequence.
ACCESSION   DTVW01000795 DTVW01000000
VERSION     DTVW01000795.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 6790)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6790)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6790
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1975971"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1368)
                     /locus_tag="EYO87_10420"
     CDS             complement(<1..1368)
                     /locus_tag="EYO87_10420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HIC66393.1"
                     /translation="MKFTLSWLKEHLDTDASLTDITEALTDLGLEVEDVSDPAARLDR
                     FTLARVVSAEQHPDADRLRVCRVMTDEGEKQIVCGAPNARAGITVVLAKPGDYVPGID
                     VTLGVGKIRGVESHGMMASERELELSDEHEGIIELPSGEVGEKFTDWLAAHAPEKIDP
                     VIHVKITPNRPDALGVHGIARDLSARGLGRLKPLPEARVTGSFPCPIKVTIADDAAAK
                     APFFSGRVVRGVKNGPSPAWLQKRLRAIGLRPINALVDITNFLTYDLNRPLHVFDAAK
                     VRGDLILRAARGDEKIVALDDKTYALPAGAVVICDQTGPESIAGVMGGAASGAGEFTT
                     EVFIEAAYFDPISTAATGRALKINSDARYRFERGIDPIFTLHGLELATKMVIDLCGGE
                     ASEIVTAGTLPDTGRAYRLDPARTSSLVGLDIPEAKQRATLEALGFRLSGDLAHVPSW
                     RPDVLG"
     gene            complement(1538..1990)
                     /locus_tag="EYO87_10425"
     CDS             complement(1538..1990)
                     /locus_tag="EYO87_10425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012179450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside deaminase"
                     /protein_id="HIC66394.1"
                     /translation="MAKFTSHMAQALAEARAAAGRGEVPVGAVILSPQGRVVAAAGNR
                     TRELSDPTAHAEILALRAACAKAGTERLPGHVLWVTLEPCPMCAADIAAARIATLFYG
                     ADDPRMGGVAHGARVFDHPQCHHRPQIYDGIGAQAAQRLLRDFFAARR"
     gene            2110..3540
                     /locus_tag="EYO87_10430"
     CDS             2110..3540
                     /locus_tag="EYO87_10430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010394209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine synthase"
                     /protein_id="HIC66395.1"
                     /translation="MTDNPENPGKPADADRIAKVIARAGLASRREAERMIREGRVTVN
                     GQKIDSPALDVLPTDLIVVDGRKLDEKQDTRLWLYYKPVGLVTTDSDEKGRQTVFDAL
                     PRDLPRVMSIGRLDLTSEGLLLLTNDGELKRRLELPSTGWLRRYRVRVNGNPSDLTFA
                     PLRRGATIDGEDFAPMEIRLDSQQGANAWLTVGIREGRNREIRRAMTHVGLQVNRLIR
                     VGYGPFKLAGLEKNQVSEVRRKVLRDQLGGLLTGEVEEKDREMRPRGAAGDRPLRGRP
                     DDRSGDRPEGRTFRSAGPDRPRREDGTGPRGPRGKPEGRGGHAAFADRAARGPDDKSA
                     GDRPSRGGSPGTKDGRPRGPRTEGDQGDRPRRSFAGKPGKGRFSQDGKPWDRKPADRT
                     PKNAMSGDDRAGHGTGEEGRDRPRRGFAAKPAEGQGARRSFAKSGPRPQGAKPGAKGG
                     RPLGGSKPFKGKPGGGGRPSGKPRKP"
     gene            complement(3627..3803)
                     /gene="hemP"
                     /locus_tag="EYO87_10435"
     CDS             complement(3627..3803)
                     /gene="hemP"
                     /locus_tag="EYO87_10435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010394206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemin uptake protein HemP"
                     /protein_id="HIC66396.1"
                     /translation="MTAIRPADFTPASPHPLSRLPQHDATQLTRGGNQALIILDDQIY
                     QLRITRAGKLILTK"
     gene            complement(3914..4792)
                     /locus_tag="EYO87_10440"
     CDS             complement(3914..4792)
                     /locus_tag="EYO87_10440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter substrate-binding protein"
                     /protein_id="HIC66397.1"
                     /translation="MRFSVLIAILIGFASPALAAPTRIVADTPVTASLVRQVAGDLAE
                     IPVLLPAGSDPHSYQLRPSDARALQQADLLIWVGPVLTPWLDRAAESLSAESRNLELA
                     ALPGVQTRGYGNDGNDGKTDPHLWLDPDNAGLWLAAIAEALASHDAGNASRYRSNARS
                     AQQRIAALDRQIAAEVAPLSGKAFVVFHDAYGYFTRHYGLSPALAVTLGDASDPSAAR
                     LRDIRNQIAATNAICAFSEYGQDPRRIGTVIDGTNARIAGEFDLLGRTMPQGPDLYSD
                     ILKGMADNLIGCLGKS"
     gene            4876..5373
                     /locus_tag="EYO87_10445"
     CDS             4876..5373
                     /locus_tag="EYO87_10445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008030189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor"
                     /protein_id="HIC66398.1"
                     /translation="MSNQVPATAFVPHDHQACAARALDGAEARVAAGGGRLTPVRRRT
                     LEILLESHRAMGAYDILQRLAGAGFGHQPPVAYRALEFLVRHGLAHRLQRLNAFAACL
                     HPGHDHPAAFFICRQCDRLAEFPATQVRDALADLAGKTGFAIERATIEAVGLCPACAT
                     DRIAL"
     gene            5370..6140
                     /locus_tag="EYO87_10450"
     CDS             5370..6140
                     /locus_tag="EYO87_10450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010137189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter ATP-binding protein"
                     /protein_id="HIC66399.1"
                     /translation="MNALIEARGLTIWRPGTKEPVLSHVDFRIDPGEVVTVVGPNGSG
                     KSTLVRALLGHMPLASGQVVRQAGLRIGYVPQRVQLDTAMPMNVRRFLSLPRRIDAAA
                     ASAILARTGVEGLERRPLSQLSGGQFQRVLLARALLHDPHLLVLDEPTQGLDQPGLVA
                     FYKLIDEVRRQTGAAVLLVSHDLLVVMRSSDRVICLNGHVCCEGSPRQVSSAPEYRAL
                     FGGGAEGMLALYRHDHDHDHDHAVDQAHHHPRGASPDA"
     gene            6133..>6790
                     /locus_tag="EYO87_10455"
     CDS             6133..>6790
                     /locus_tag="EYO87_10455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_355069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66400.1"
                     /translation="MLDDFFIRGLLAGLGLAVVAGPLGSFVVWRRMAYFGDATAHAAI
                     LGVAISLAFGVSIYLGTLATAMAMAVTVSALVSRGQAMDTMLGVLAHSALAVGLVGVS
                     FVPSARTDLTSFLFGDILTVGRPDLALIWGGAALVLALLVWRWQRLVTATLNEELAMA
                     AGIDPRIERLVLSISLAVVVALSIRVVGSLLISAMLIVPAAAARGLSRTPEAMAAAAA
                     L"
BASE COUNT         1105 a         2156 c         2392 g         1137 t
ORIGIN      
        1 gcccagcacg tcgggccgcc acgaggggac atgggccaga tcgcccgaca ggcgaaatcc
       61 aagcgcctcc aacgtcgccc gctgcttggc ttccggaatg tcgaggccga cgaggctgct
      121 ggtgcgggcc gggtccagcc gataggcgcg gccggtatcg ggcagggtgc cggcggtgac
      181 gatttccgag gcttcgccgc cgcagagatc aatgaccatt ttcgttgcta gttcaaggcc
      241 atgaagcgta aaaatcgggt cgattccacg ttcaaagcga tagcgtgcat cggaattgat
      301 cttcagcgcc cggccggtgg cggcggtgct gatcggatcg aaataggccg cctcgatgaa
      361 gacctcggtc gtgaattctc cggcgccgga agcggccccg cccatcacgc cggcgatgct
      421 ttccgggccg gtctggtcac agatcacgac ggcaccggcg ggcagcgcat aggtcttgtc
      481 gtccagggca acgattttct cgtccccgcg cgccgcgcgc aggatcagat cgccccgaac
      541 cttggccgca tcgaagacgt gaagcggacg gttcaggtcg taggtaagga aattggtgat
      601 atcgaccagg gcgttgatcg gtcgcagccc gatggcgcgc agccgctttt gcagccaggc
      661 cggcgagggt ccgtttttga cgccgcgcac gacgcggcca ctgaagaacg gggcttttgc
      721 ggctgcgtcg tccgcgatcg tgaccttgat cgggcagggg aaactgcccg ttaccctggc
      781 ctcgggcagc ggtttcagcc gacccagacc gcgcgccgaa agatcgcggg cgatgccatg
      841 gaccccaagc gcgtcgggcc ggttcggagt gatcttgaca tggatcaccg ggtcgatctt
      901 ctcgggcgca tgggccgcca gccagtcggt gaatttctct ccgacctctc ccgagggcag
      961 ttcgatgatg ccctcatgtt cgtccgacaa ttccagttcc cgctcggacg ccatcatgcc
     1021 gtggctttcg acgccgcgga tcttgccgac gcccagcgtc acgtcgatgc cgggcacata
     1081 atcaccgggc ttggccagca ccacggtgat acccgcgcgg gcattcggcg cgccgcagac
     1141 aatctgtttc tcgccctcgt cggtcatcac gcggcagacc cgcagccggt cggcgtcggg
     1201 gtgctgctcg gccgaaacga ccctggccag cgtgaagcgg tccagccggg cggccggatc
     1261 gctgacatct tccacctcga ggcccagatc ggtcagcgcc tcggtgatgt cggtcagcga
     1321 ggcgtcggtg tcgagatgct ccttgagcca ggacagggtg aatttcatgt cggatcatcc
     1381 gttgagaggc gcgggccgcg cgggccgggt gttcggcccg gttcctagcg caagcgacgg
     1441 gggattggta ggggcgcgaa gggcgccgtt cgcgcagcgg cgcgcccggc ccagcggcag
     1501 cgaccggggc gggcttcgcc cggcccgtcc cccgatctca gcgccgcgcg gcgaagaagt
     1561 cgcgcaacag gcgttgcgcg gcctgggcgc cgattccgtc gtagatctgg ggccgatgat
     1621 ggcactgggg atgatcgaag acccgcgccc catgcgccac gccgcccatg cgagggtcgt
     1681 ccgcgccata gaacagcgtg gcgatccgcg cggcggcgat gtcggcggcg cacatcgggc
     1741 agggttccag cgtgacccac aggacatggc ccggcagacg ctctgttccc gccttcgcgc
     1801 aggccgcgcg cagggccaga atctcggcat gggcggtcgg atcggacaat tcgcgcgtcc
     1861 ggttgcctgc ggcggcgacg acgcggccct gcggcgacag gatcaccgcg cccaccggca
     1921 cctcgccccg tcccgcggcc gcgcgcgcct ctgccagggc ttgcgccata tgcgatgtga
     1981 acttcgccat gcccgcttgt cgcaaggccg cgattgccgc gcaagcgggc aagacaaggc
     2041 tttccatgcg gtgccggaaa gcctagaacg ccccttttgc caccgcagcg atgcgcagga
     2101 gagatcgcca tgaccgacaa tcccgaaaat cccggcaaac cggcggatgc cgaccgcatc
     2161 gccaaggtga tcgcccgtgc cggccttgcc agccgccgcg aagccgaacg gatgatccgc
     2221 gagggccggg tgacggtaaa cgggcaaaag atcgacagcc cggccctgga tgtcctgccc
     2281 acggacctga tcgtggtcga tggccggaag ctggacgaga aacaggatac gcggctgtgg
     2341 ctctactaca agccggtcgg actggtcacg acggattcgg acgaaaaagg ccggcagacc
     2401 gtgttcgatg cgctgccccg cgatctgccg cgggtgatga gcatcgggcg gctggatctg
     2461 acctccgaag ggcttttgct gctgaccaat gacggcgaat tgaagcggcg gctggaactg
     2521 ccctcgaccg gctggctgcg ccgctaccgg gtgcgggtga acggcaatcc cagcgacctg
     2581 accttcgcgc ccctgcgacg gggcgcgacc atcgatggcg aggatttcgc gccgatggag
     2641 attcggctgg acagtcagca gggggcgaat gcctggctga ccgtcggcat ccgcgaaggc
     2701 cggaaccgcg agatccgtcg cgcgatgacc catgtcggct tgcaggtgaa ccggttgatc
     2761 cgcgtcggct atggcccgtt caagctggcg ggactggaaa aaaaccaggt gtccgaggtc
     2821 aggcgcaagg tgctgcgcga tcaactgggc gggttgctga ccggcgaggt cgaggagaag
     2881 gaccgcgaga tgcgcccgcg tggcgccgcg ggcgaccgcc ccctgcgtgg caggccggat
     2941 gatcggtcgg gcgatcggcc cgagggccgg acgtttcgca gcgccggccc ggaccggccg
     3001 cgccgcgagg atggcacggg accgcgtggt ccgcgcggca aaccggaagg gcggggcggc
     3061 catgcggctt tcgccgatcg tgcggcgcgc ggcccggacg acaaatccgc cggggatcgt
     3121 ccctcgcggg ggggcagtcc cgggaccaag gatggccgtc cgcgcggccc tcgcacggaa
     3181 ggcgatcagg gtgaccgacc gcgccgcagt tttgccggca agcctggcaa gggtcgcttc
     3241 tcgcaggatg gcaaaccctg ggacaggaag ccggccgaca ggacgccgaa gaacgccatg
     3301 tccggggatg accgcgccgg acatggcaca ggcgaggaag gccgcgaccg tccacgccgc
     3361 ggctttgcgg cgaagccggc cgaagggcag ggcgcgcggc ggagctttgc gaaatccggg
     3421 ccaaggccgc agggcgcaaa acccggcgcc aagggcgggc gtccgcttgg cggatcaaag
     3481 ccgttcaagg gcaagccggg cggcggcggc cggccatcgg ggaaaccgcg caaaccgtga
     3541 aggtccgccc atcgaccgca ggcgcaatct cggccgaacc tcgtgcccgg cgctggcggg
     3601 cgccggggga atgccgaccg ggtggatcat ttcgtcagga tcagctttcc cgcgcgcgtg
     3661 atccgcagtt gatagatttg atcatcgagg atgatcagcg cctggttccc gccccgtgtc
     3721 aactgcgtcg catcatgctg cggcagacgg gacagggggt gcgggctggc cggggtgaaa
     3781 tcggcgggac gaatggcggt catcttggcc tcctggatct gggtgatgct tccctaagat
     3841 cctgacaaaa tgtctctggt atgtcaaagt aaaagagtcg gaattatcct tctgcgcgat
     3901 aaagtgcccc gcgtcagctt ttgcccaggc agccgatcag gttgtcggcc atgcctttca
     3961 ggatgtccga gtaaagatcg gggccttgcg gcatcgtccg gcccagcagg tcaaactctc
     4021 cggcgatccg ggcattggtg ccatcgatca ctgtcccgat ccgacgcgga tcctgtccat
     4081 attcggagaa ggcgcagatc gcgttggttg cggcgatctg gttgcggata tctcgcaacc
     4141 gcgcggccga agggtcgctg gcatcgccca gcgtcacggc aagcgccgga ctcaggccgt
     4201 agtgacgggt gaaatagcca taggcatcat gaaagacgac aaatgccttg cccgaaaggg
     4261 gggccacttc cgccgcaatc tgccgatcca gtgcggcaat cctctgctgc gcgcttcggg
     4321 cattgcttcg atagcgcgac gcattgcctg cgtcgtggct ggccagggcc tcggcgatcg
     4381 cagccagcca cagaccggca ttgtcgggat ccagccatag atgcggatcg gtcttgccat
     4441 cgttgccgtc gttgccgtag ccacgggtct ggacacccgg cagcgcggca agctctagat
     4501 tgcggctctc cgcgctcaac gattcggcgg cgcgatccag ccagggcgtc agaaccggtc
     4561 cgacccagat caagaggtcg gcttgctgca aggcgcgtgc atccgagggt cgcaactgat
     4621 agctgtgcgg atcggatccg gctgggagca gaaccggaat ttctgccaga tcgcccgcga
     4681 cctgccggac aagcgaggct gtcacaggcg tatcggcgac gattcttgtc ggtgcagcca
     4741 aggcagggct ggcaaagccg atcaggatcg caatgagaac cgaaaagcgc ataggtgaca
     4801 ccgtcgaacg agttgcgggc cctcctcatg caatgttaca aggtaacaag tcaaataaat
     4861 ttgtgataag ataacatgag caatcaggtt ccggcgaccg cctttgtgcc acatgaccac
     4921 caggcctgcg ccgcccgcgc gctggacggg gccgaggcgc gtgtcgccgc cgggggcggg
     4981 cggctgactc cggtccggcg gcgcacgctg gagatcctgc tggaatcgca ccgcgcgatg
     5041 ggcgcctatg acatcttgca gcggctggcc ggtgccgggt tcgggcacca gccgcccgtg
     5101 gcctatcgcg cgctggaatt cctggtccgg cacggcctgg cccaccgcct gcaacggctg
     5161 aacgccttcg cggcttgcct gcatcccggt catgatcatc ctgctgcctt tttcatctgc
     5221 cgccaatgcg acaggctggc cgagtttccg gccacgcagg tccgcgatgc cctggccgat
     5281 ctggccggca agaccggctt tgccatcgag cgcgcgacga tcgaggccgt gggactttgc
     5341 ccggcctgcg caaccgacag gatcgcccta tgaacgcgct gatcgaggcg cgcggcctga
     5401 ccatctggcg ccccggcacg aaagagccgg tcctgtcgca tgtcgatttc cgcatcgatc
     5461 cgggcgaggt cgtgacggtg gtcgggccga acggatcggg caaatcgacg ctggtgcggg
     5521 cattgctggg gcatatgccg ctggcgagtg ggcaggtggt tcggcaggcc ggattgcgga
     5581 tcggctatgt cccgcagcgg gtgcagctcg acaccgcgat gccgatgaat gtccgtcgct
     5641 tcctgtcgct gccccggcgt atcgatgcgg ccgctgcctc ggccatcctg gcgcggaccg
     5701 gggtcgaggg gctggagcgc cgcccgctga gccagctttc gggcgggcaa ttccagcgtg
     5761 tcctgctggc ccgcgcgctg ctgcacgatc cgcatctgct ggttctcgat gagccgacgc
     5821 aggggctgga ccagcctggc cttgtggcct tctacaagct gatcgacgag gtgcggcgtc
     5881 agaccggcgc ggcggtgctg ctggtcagtc atgatcttct ggtcgtgatg cggtcgtcgg
     5941 accgggtcat ttgcctgaac ggccatgtct gctgcgaggg ctcgccccgg caggtcagca
     6001 gcgcgccgga atatcgcgcc ctgttcgggg gcggcgcgga aggcatgctg gcgctgtatc
     6061 gccatgatca cgatcacgac catgatcatg ccgtggatca ggcgcatcac cacccgcgcg
     6121 gcgccagccc ggatgcttga cgatttcttc atccgcgggc tgctggccgg attggggctg
     6181 gcggttgtgg ccgggcctct gggcagtttc gtggtctggc gccgaatggc ctatttcgga
     6241 gacgccacgg cccatgcggc catcctgggc gtggcaatca gcctggcctt cggtgtctcg
     6301 atctatctgg gcacgctggc gacggcgatg gcgatggccg tgacggtttc ggcgctggtg
     6361 agccggggac aggcgatgga cacgatgctg ggcgtgctgg cccattcggc gctggcggtc
     6421 gggctggtcg gcgtcagttt cgtgccatct gcacggaccg acctgaccag tttcctgttt
     6481 ggcgatatcc tgacggtggg ccgccctgat ctggcgctga tctggggcgg cgcggcgctg
     6541 gttctggcgt tgctggtctg gcggtggcag cgactggtga cggcgacgct gaacgaggaa
     6601 ctggcaatgg ccgcgggaat cgatccgcga atcgaacggc ttgtgctgtc catcagcctg
     6661 gcggtggtgg tcgcgctgtc gattcgcgtg gtcggatcgc tgctgatttc agccatgttg
     6721 atcgtgccgg cggcggcggc gcgcggattg tcgcgcacgc ccgaggcaat ggctgcggcg
     6781 gccgccctga
//
LOCUS       DTVW01000796            2161 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1977594, whole
            genome shotgun sequence.
ACCESSION   DTVW01000796 DTVW01000000
VERSION     DTVW01000796.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2161)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2161)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2161
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1977594"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..518)
                     /locus_tag="EYO87_10460"
     CDS             complement(<1..518)
                     /locus_tag="EYO87_10460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_351819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA ester lyase"
                     /protein_id="HIC66401.1"
                     /translation="MSFRTQPLPPARLNRCQLFGPGSRDSLFEKMAKSEADVINIDLE
                     DSVAPDDKEQARKNAIQAIGDVDWGSKTLSVRINGLDTPFWYRDVVELLEQADERLDQ
                     IMIPKAGNAGDIYAVDALVTAIERAKGRKKKIGFEVIVESAAGLCHVEEIAAASPRMQ
                     AISLGAADFAAS"
     gene            680..1540
                     /locus_tag="EYO87_10465"
     CDS             680..1540
                     /locus_tag="EYO87_10465"
                     /EC_number="2.6.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_351816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-amino-acid transaminase"
                     /protein_id="HIC66402.1"
                     /translation="MTRIVYVDGEYLPEDRATVSIFDRGFLMADGVYEVVSVLGGKLI
                     DLPGHMARLQRSLNELAMTDPLSESDYTAAFRELVARNEIGDGLIYLQVTRGNAGDRD
                     FAYPPEGTRPTVVMFTQSKPGLADAPVSKTGWKIISVEDLRWGRRDIKTVQLLYPSMA
                     KMEAKARGVDDAWLVEDGHVTEGSSNNAYIVKDGVIVTRELSHDILHGITRAAVLRLA
                     AEAQMKVEERRFTIAEAQDADEAFVTSASAFVMPVVQIDGVEIGSGKPGPVAARLREI
                     YLEESRKSGI"
     gene            complement(1603..>2161)
                     /locus_tag="EYO87_10470"
     CDS             complement(1603..>2161)
                     /locus_tag="EYO87_10470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010398737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="N-formylglutamate amidohydrolase"
                     /protein_id="HIC66403.1"
                     /translation="AALMDAPAILSDFSRLVIDPNRGEDDPTLLMRLYDGTVIPANKS
                     ADAAERRRRLERLHRPYHAALARLAARHPARCLCAVHSFTPQLRGRPPRPWQIGILYS
                     HGDARLGPAMVAACRAEGWITGENQPYSGHLDGDSIDRHALSHGRPNMLIEIRNDLIR
                     TEQGQAEWAGRLAPVIARVLDETGL"
BASE COUNT          376 a          678 c          735 g          372 t
ORIGIN      
        1 atcgaggccg cgaaatcggc cgcgcccaga ctgatcgcct gcatccgggg cgatgcggcg
       61 gcgatctctt cgacatggca caggcccgcc gcgctttcga cgatcacctc gaagccgatt
      121 tttttctttc gacccttcgc gcgttcgatc gcggtgacca gcgcgtccac ggcgtagatg
      181 tcgccggcgt tgccagcctt cgggatcatg atctggtcca gccgctcgtc cgcctgttcc
      241 agcagttcca ccacatcgcg ataccagaag ggcgtgtcca gcccgttgat ccgcaccgac
      301 agcgtcttgc tgccccaatc cacgtcgccg attgcctgaa tcgcgttctt ccgtgcctgt
      361 tccttgtcat ccggcgccac cgagtcctcg agatcgatat tgatgacgtc ggcttccgat
      421 ttcgccatct tctcgaaaag gctgtcgcgg gatccggggc cgaacaactg gcagcggttc
      481 agacgggcag ggggcagggg ctgggtgcga aagctcatgc gctggtcctc atctgtcgaa
      541 tcgcgggcgt gatgagcaat aatgtttcgc ggccgatgct gcaagcgcga aatcgggcgc
      601 gccgcggcgc agcttgacgc ggatcgggat agggtcgaag agcggaacgg aaatcgcggc
      661 cagagggaag ggacacggaa tgacgcgcat tgtctatgtt gacggggaat atctgcccga
      721 ggatcgggcg accgtctcga tcttcgaccg gggcttcctg atggccgatg gcgtctacga
      781 agtggtcagc gttctgggcg gcaagctgat cgaccttccc ggccacatgg cgcgcctgca
      841 acggtccctg aacgaactgg cgatgaccga tcccttgtca gagagcgatt acaccgccgc
      901 ctttcgcgaa ctggttgcaa gaaacgaaat cggcgacggt ctgatctatc ttcaggtgac
      961 gcgcggcaat gccggtgacc gcgattttgc ctatccgccc gaaggaacgc gcccgaccgt
     1021 ggtgatgttc acccagtcga agcccggact tgccgatgcg ccagtgtcga agaccggctg
     1081 gaagatcatc agcgtcgagg atctgcggtg ggggcggcgc gacatcaaga cggtgcagct
     1141 gctctatccc tcgatggcca agatggaggc caaagcgcgc ggcgtcgacg atgcctggct
     1201 ggtcgaggac ggccacgtga ccgaaggcag cagcaacaac gcctatatcg tcaaggacgg
     1261 ggtgatcgtg acgcgcgaat tatcccacga catcctgcac ggaatcaccc gcgccgcagt
     1321 gctgcgtctt gccgccgagg cgcagatgaa ggtcgaggaa cgccgcttca ccatcgccga
     1381 ggcgcaggac gcggacgagg ccttcgtcac ctcggcctcg gccttcgtga tgccggtggt
     1441 ccagatcgac ggcgtggaaa tcggcagcgg caagcccggc ccggtcgcgg cccgcctgcg
     1501 cgagatctat ctggaagaaa gccgcaagtc cgggatctga ggcggccgcc gggggctgtc
     1561 tgcccccgga cccccgaagg tatcgggaaa gagcgcgagg gttcagagtc ccgtttcatc
     1621 cagcacgcgc gcgatgaccg gagccagcct tccggcccat tcggcctggc cctgttcggt
     1681 ccggatcagg tcgttgcgga tctcgatcag catgttgggg cggccatggg acagggcgtg
     1741 acggtcgatc gaatcgccgt ccagatggcc gctatagggc tggttctcgc cggtgatcca
     1801 gccttccgcg cggcaggccg cgaccatggc agggcccagg cgtgcgtcgc cgtgcgaata
     1861 gaggatgccg atctgccatg gacgcggcgg ccggccgcgc agctgcgggg tgaagctgtg
     1921 gaccgcgcag aggcagcgcg ccgggtggcg ggcggccagc cgcgccagcg cggcatggta
     1981 gggacggtgc aggcgctcca gcctgcgacg acgttcggcc gcgtcggcgc tcttgttggc
     2041 cgggatcacc gtgccgtcat aaagacgcat cagcagggtc gggtcgtcct cgccccggtt
     2101 cgggtcgatc accaggcgcg agaaatcgga caggatcgcg ggggcatcca tcagcgcggc
     2161 c
//
LOCUS       DTVW01000797            1858 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1977841, whole
            genome shotgun sequence.
ACCESSION   DTVW01000797 DTVW01000000
VERSION     DTVW01000797.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1858)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1858)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1858
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1977841"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(73..855)
                     /locus_tag="EYO87_10475"
     CDS             complement(73..855)
                     /locus_tag="EYO87_10475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66404.1"
                     /translation="MNGLVATLAVALFMAGPALAQSLPPGLVGRWDVSQEACAASGTS
                     VSQIDILPDRIDTFGGSAILREVEKIGDVTFVAGDFEQREGAEQIAPRTGEYFRFDQR
                     DGPDRMTFVWKDVQRTALVRCGKAVVEKKAVDLAPRPPAANEPGYDGQLPIPLGLWVI
                     AGESCQNPANAGWRVYDGAGLRGASSIRCEIDATQRQGESILFSQLCEASYDGKVRAT
                     RDRITITAPRRFTLLEAAGESPDEDAGRSGQDFNWCGPQLRP"
     gene            complement(1262..1825)
                     /locus_tag="EYO87_10480"
     CDS             complement(1262..1825)
                     /locus_tag="EYO87_10480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009818571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66405.1"
                     /translation="MYMRAVNLVFTRGLVELVHNTLTGLGIRDRIKLIASAKIITAFD
                     ICRISALGADGVNMGRGFMFAIGCIQAQACHTGKCPTGITTQDPGRYRALVVPDKAQR
                     VARFHKATMFALKEACESSGLSHPDAFTPHHLMIRTGPREVRSAASLYDWLKPGALLQ
                     GDVDHPAFRKYWHRARIGDWGMAEAAW"
BASE COUNT          315 a          606 c          586 g          351 t
ORIGIN      
        1 ctcgggatgc ctcgacgggc ggggctggaa ccatacggaa cacctggccg aaatcggcag
       61 cccctcgtcg gttcacggcc gaagttgggg tccgcaccag ttgaagtcct ggcctgaccg
      121 gccagcgtct tcgtcaggac tttccccggc agcttccaga agcgtgaacc gtcgcggcgc
      181 ggtgatggtg atcctgtccc gcgtggcccg gaccttgccg tcatagctgg cctcgcagag
      241 ctgcgaaaac aggatgctct cgccttgccg ttgggtggcg tcgatttcgc agcgaatgct
      301 cgacgcgccg cgcaggcccg cgccgtcata gacgcgccag cccgcattgg cggggttctg
      361 gcaggattct cccgcgatga cccaaagtcc gagggggatc ggcaactgcc cgtcatatcc
      421 cggttcgttc gcggctggcg gcctgggggc gaggtccacg gctttcttct ccaccaccgc
      481 ctttccgcat ctgacgaggg cggtcctctg tacgtccttc cagacgaaag tcatccggtc
      541 cggcccgtct cgctggtcaa agcggaaata ttcgcctgta cgcggcgcga tctgctcggc
      601 cccctcgcgc tgctcgaaat cgccggccac gaaggtgaca tcgccgatct tttcgacctc
      661 tcgcaggatg gcactgccgc cgaacgtgtc gatccggtca ggcaggatgt cgatctggct
      721 caccgaagtg ccggacgcgg cgcaagcctc ctgcgagacg tcccaacgcc cgacaagacc
      781 gggcggcaag gattgtgcga gggctggccc ggccatgaaa agcgcaaccg caagtgtcgc
      841 gacaagtccg ttcatttcct gttcgcctcc agggcaaagt cgagcgatct gaaacctcgt
      901 atcggcggtg tcggtgtagc tcgaacatgg agtgttcgcg atgcccggtt caccgccgag
      961 ggtatcaatg atggcaatgc acgacaagct gccgttccgg atcggggttg gcgcaaggga
     1021 agtgttgccg aaggaaccga tgaggcaatc aggccgccct ggattgcgaa cgggacggct
     1081 tccgtccaca gccaacatcc cggcgaaatt cgcaggcggt gcccgcgcgg tgtacaggct
     1141 gtgcaggtcc ggtgtacggc ctgtgaccgg tcgcgcccgg catttgctgg tttttctgcg
     1201 ctgccggctg ccagcctgtg tcacgcaacg tacgctgctt gcgccgcatc ttgcgcaacg
     1261 ctcaccaggc cgcctcggcc attccccaat ccccgatccg cgcccggtgc cagtatttgc
     1321 ggaacgccgg atgatccacg tccccctgca acagcgcgcc cggtttcagc cagtcataaa
     1381 ggctcgcggc agaccgcacc tcgcgcgggc cggtacggat cataaggtga tgcggcgtga
     1441 acgcgtcggg atgggacaac ccgctgcttt cgcaggcttc cttcagcgcg aacatcgtgg
     1501 ccttgtggaa tcgcgccacc cgctgcgcct tgtcgggcac gaccagcgcc cggtagcggc
     1561 ccggatcctg cgtggtgatc ccggtcgggc atttgccggt atggcaagcc tgcgcctgga
     1621 tgcagccgat cgcgaacatg aagccgcgtc ccatgttcac cccgtccgcg ccaagcgccg
     1681 agatacggca gatgtcaaag gcggtgatga tcttggccga tgcgatcagc ttgatccggt
     1741 cccggattcc aagtccggtc agggtattgt gcaccagctc cacaagtccc cgggtgaaaa
     1801 ccaggtttac tgcccgcata tacatttgct atttttgaat gctgtgaggg cttcgggc
//
LOCUS       DTVW01000798            4712 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1980222, whole
            genome shotgun sequence.
ACCESSION   DTVW01000798 DTVW01000000
VERSION     DTVW01000798.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 4712)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4712)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4712
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1980222"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..364
                     /locus_tag="EYO87_10485"
     CDS             <1..364
                     /locus_tag="EYO87_10485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005979101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="NAD(P)H-quinone oxidoreductase"
                     /protein_id="HIC66406.1"
                     /translation="IDLILDMVGGSYIPRNVTTLAQDGRLVMIAFLEGPKVELNFAQV
                     MVKRLTMTGSTLRPQSDTAKAEIADQVRKKLWPMIASGAVAVTIDSEFDLADAAQAHR
                     RMESSDHIGKIVLNVAGD"
     gene            complement(361..657)
                     /locus_tag="EYO87_10490"
     CDS             complement(361..657)
                     /locus_tag="EYO87_10490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008553645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HIC66407.1"
                     /translation="METRPADTGTPLCPLCGRPIPPDVPQSRHHLTPKLRGGKGGPTV
                     LLHQVCHSTIHKTLSETDLARRYDSVDALRAHPDLARFFAWVAKRPPGWKGKVR"
     gene            complement(653..2539)
                     /locus_tag="EYO87_10495"
     CDS             complement(653..2539)
                     /locus_tag="EYO87_10495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA synthetase"
                     /protein_id="HIC66408.1"
                     /translation="MGRFGTYEDRDRLEAEMAYEARDLPVTIHDFLSRTAKAHPDRPA
                     ISFQLLAGPRDPATTLTWQDLLERVTETANLFRKLGIGPTDTVAYLLPNSIETPVVLL
                     AGATAGIVNPINPLLDAKQIAGILRETRARVLVTLKSFPRTDVAQKAAEAVAEAPGVT
                     HIIEIDLRRHLRGPKRFLVPLLRPRVRKRHKARVLDFEAAASAERHTRLDFEDIPKDR
                     IAAYFHTGGTTGTPKVAQHSYRGMIYNGWLGGALLFDETDVLMCPLPMFHVFAAYPVL
                     MSCIASGAHVVMPTPAGYRGEGVFDNFWKLIERWQATFLITVPTAISALMQRPVDADV
                     SSLKTAISGSAPLPMELYNRFKSATGVEISEGYGLTEATCLVSCNPVDGMKKVGSVGI
                     PLPYTHVRILNHDDAGRVHECATDEVGEICVANPGVLPGSTYTEADKNHDLFAEDRYL
                     RTGDLGRLDSDGYLWITGRAKDLIIRGGHNIDPAEIEDALLSHPAVAFAGAIGQPDAF
                     AGELPCVYVELVADAQTSVDDLMDHARRNIHERAAAPKYVEILPELPKTAVGKIFKPE
                     LRKLAITRVYDAALDGTGCHVIEVIDDKKRGLVARLSRAARPDEDVVAHKLGEFTRPW
                     EWAD"
     gene            2828..3349
                     /locus_tag="EYO87_10500"
     CDS             2828..3349
                     /locus_tag="EYO87_10500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CAP domain-containing protein"
                     /protein_id="HIC66409.1"
                     /translation="MTALLTATLTLAACAGGTPSPKGGDPTDVQATAPGKATCPATSQ
                     AQNRAGAEATNGIRGRSDLPPVRANMLLAEVAAQHACDMAKRGRMTHVGSTTTGPGPR
                     VKARGYAPMLTAENIAAGPFDLPRVLGEWNNSQGHLRNILIPQVRDYGIGQAIAADGK
                     TRFWAAVYAAPRN"
     gene            complement(3346..>4712)
                     /locus_tag="EYO87_10505"
     CDS             complement(3346..>4712)
                     /locus_tag="EYO87_10505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010398104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HIC66410.1"
                     /translation="SIALRNMLILAGGMAMLAFTSVKLMGLVLLIVPAILIPIIVLGR
                     RLRTLSRANQDWIASSSGTASETLLAAQTVQAFTHESRSIAQFDGVTEQSYDVALTRI
                     RTRALMTAIVIFLIFAGVIGVLWVGARDVRQGVMTAGQLVQFVIYAILVASSTGALSE
                     IWGELQRAAGATERLAELLGAHDALTDPASPVPLPRPVKGRIALEGVGFHYPTRPDVS
                     ALDGVDLTIRPGETVALVGPSGAGKTTVIQLIQRFWDPGTGRVTLDGIDLRDMRRDDF
                     RKSMALVPQEPVIFAASVLDNIRLGRPEAGPAEVESAARAAHAHDFIAALPDGYDTPL
                     GERGVMLSGGQRQRVAIARAILRDAAVLLLDEATSALDAESESLVQAAVNDLAQGRTT
                     IVIAHRLATVKKADRIIVFDRGRIVAEGSHEALVTQGGLYARLARMQFTEGSVAAPAE
                     EEPA"
BASE COUNT          805 a         1540 c         1598 g          769 t
ORIGIN      
        1 cattgatctg atcctcgaca tggtgggcgg cagctatatc ccgcggaatg tgacgacgct
       61 ggcgcaggac gggcggctgg tgatgatcgc ctttctggaa ggccccaagg tcgagctgaa
      121 ttttgcgcag gtcatggtca agcggctgac gatgaccgga tcgaccctgc gtccgcaatc
      181 cgacaccgcc aaggccgaga tcgccgacca ggtccgcaag aagctgtggc cgatgatcgc
      241 cagcggcgcg gtcgccgtca ccatcgacag cgaattcgac ctggctgacg ccgcccaggc
      301 gcacaggcgc atggaaagca gcgaccatat cggcaagatc gtcctgaacg tcgcgggcga
      361 ctagcgcacc ttgcccttcc agccgggcgg gcgtttcgcc acccaggcaa agaaccgcgc
      421 cagatcggga tgggcgcgca gggcatccac gctgtcatag cgccgcgcga ggtcggtttc
      481 gctcagggtc ttgtgaatgg tcgaatggca gacctgatgc agcagcacgg tcgggccgcc
      541 cttgccgccg cgcagcttgg gggtcaggtg atggcggctt tgcggcacat ccggcgggat
      601 cggcctgccg caaagcgggc agaggggcgt cccggtatct gcgggccgcg tctcaatcgg
      661 cccattccca gggccgggtg aattcgccca gcttgtgggc cacgacatcc tcgtctgggc
      721 gtgccgcgcg ggacagccgc gccaccagac cgcgcttctt gtcgtcgatc acctcgatga
      781 catgacagcc ggtgccgtcc agcgccgcgt cataaacccg cgtgatcgcc agcttgcgca
      841 attccggctt gaagatcttg ccgaccgccg tcttgggcag ttccggcagg atttcgacgt
      901 atttcggtgc cgcggcgcgt tcgtggatgt tccggcgcgc gtgatccatc aggtcatcga
      961 ccgatgtctg ggcatcggcg accagttcga catagacgca aggcagttcg ccggcgaagg
     1021 cgtcgggctg gccgatggcg ccggcaaagg ccacggcggg atgggacagc agcgcgtcct
     1081 cgatctcggc cgggtcgata ttgtggccgc cacgaatgat cagatccttc gccctgccgg
     1141 tgatccacag atagccgtcg ctgtccagcc gccccagatc gccagtgcgc agataccgat
     1201 cctcggcgaa aagatcatgg ttcttgtcgg cttctgtata ggtcgatccg ggcaggacgc
     1261 cgggattggc cacgcagatc tcgcccacct cgtcggtggc gcattcatgc acgcgccccg
     1321 cgtcgtcgtg gttcaggatg cggacatggg tatagggcag gggtatcccg accgagccga
     1381 ccttcttcat gccgtccacc gggttgcagc tgaccaggca ggtcgcctcg gtcaggccgt
     1441 agccttcgga aatctcgacc ccggtggcgg atttgaagcg gttatacagt tccatcggca
     1501 gcggggccga gcccgagatg gcggtcttca ggctgctgac atcggcatcc accggacgct
     1561 gcatcagcgc cgagatggcg gtcggaacgg tgatcaggaa cgttgcctgc cagcgttcga
     1621 tcagcttcca gaaattgtcg aacacgcctt cgccgcgata gccggcgggg gtgggcatga
     1681 ccacatgcgc ccccgatgcg atgcaggaca tcagcacggg ataggcggcg aagacgtgaa
     1741 acatcggcag cgggcacatc agcacgtcgg tttcgtcaaa cagcagcgcg ccgcccagcc
     1801 agccgttgta gatcatgccg cgataactgt gctgggcgac cttcggcgtg ccggtggtgc
     1861 cgccggtatg gaaataggcg gcgatgcgat ccttcggaat atcctcgaaa tccagcctgg
     1921 tgtgcctttc ggcgctggcc gcggcttcga agtccagaac cctggccttg tggcgtttcc
     1981 ggacccgtgg ccgaagcagc ggaaccagga atcgtttcgg gccgcgcagg tggcgcctga
     2041 ggtcgatctc gatgatatgg gtgacgcccg gcgcctcggc cacggcttcg gcggccttct
     2101 gcgccacatc ggttctggga aaggatttca gcgtcaccag aaccctggcg cgggtctcgc
     2161 gcaggatccc cgcgatctgt ttggcgtcca gcaacgggtt gatcgggttc acgatcccgg
     2221 ccgtggcccc ggccagcagc acgaccggcg tctcgatcga attgggcaga agataggcga
     2281 ccgtatcggt cggcccgatg cccagcttgc gaaagagatt ggcggtctcg gtcacgcgct
     2341 ccagcagatc ctgccatgtc agcgtcgtcg cgggatcgcg cggaccggca agaagctgaa
     2401 agctgatcgc cggccggtcg ggatgcgcct tggctgtgcg cgagaggaaa tcatggatcg
     2461 tgacgggcag atcgcgggcc tcgtaggcca tttccgcctc cagcctgtcg cgatcctcgt
     2521 aggtaccgaa tcggcccatg cttcacctct cccttccggc gcatcacctt gcgccgccct
     2581 cgggtgacag gatgcgacaa gggcgccggg cggggcaagg gtcgcaagcg gccggttgcg
     2641 ccgaaacgcc gcgtcacggg cgcgtcgaat gcgcgggatc ccgcgccggg cgcgccgcgc
     2701 tggtggcaaa cgattgcccg gctgcggctt ttctgcaacc attggttgaa aaccgggatg
     2761 ggatcatcca gacccgaggg acgattgcca agggaaagtt tgcgagacga tgactgcccg
     2821 aacgacgatg accgcgcttc tgaccgcgac cctgacgctg gccgcctgtg ccgggggaac
     2881 gccgtctccg aagggcggcg atcccaccga tgtgcaggcc acggcgccgg gcaaggccac
     2941 ctgtcccgcc acatcgcagg cgcagaaccg ggcgggcgcc gaagcgacga acggcatccg
     3001 tgggcgttcg gatctgcctc cggttcgcgc gaacatgctg ctggccgaag tcgctgcaca
     3061 acatgcctgc gacatggcca agcgcggtcg catgacccat gtcggcagca cgaccacggg
     3121 gcccggtccg cgcgtgaagg cgcgcggcta tgcgccgatg ctgacggccg agaatatcgc
     3181 ggcgggcccg ttcgatctgc cccgcgtgct tggcgaatgg aacaattcgc agggccacct
     3241 gcgcaacatc ctgattccgc aggtgcgcga ctacggcatc ggccaggcca tcgcggcgga
     3301 tggcaagacg cgcttctggg ccgcggtcta tgccgcgccg cgcaactagg ccggctcttc
     3361 ctcggcgggg gctgcgacgc tgccttcggt aaactgcatt cgtgccagcc gggcatagag
     3421 gccgccttgc gtgaccaggg cttcgtggct gccttcggcc acgatgcggc cgcgatcgaa
     3481 gacgatgatc cgatcggctt ttttcaccgt ggccagccgg tgggcgatga cgatggtggt
     3541 gcggccctgc gcaagatcgt tgactgccgc ctgaaccaac gattcggatt cggcgtccag
     3601 cgcgctcgtc gcctcgtcca gcagcagcac ggctgcgtcg cgcaggatgg cgcgggcgat
     3661 ggcgacccgc tgacgctgac cgcccgacag catcacgccg cgttcgccaa gcggcgtgtc
     3721 atagccgtcc ggcagcgcgg cgatgaagtc gtgggcatgg gcggcgcggg cggccgattc
     3781 gacctctgcc gggccggcct cgggacgacc gaggcggatg ttgtccagca ccgaggcggc
     3841 gaagatcacc ggctcttgcg gaaccagcgc catgcttttg cggaaatcgt cgcggcgcat
     3901 gtcccgcagg tcgatcccgt ccagcgtgac ccggcccgtg ccgggatccc agaaccgctg
     3961 gatcaactgg atcaccgtgg tcttgcccgc ccccgacggg ccgaccagcg ccaccgtctc
     4021 gcccggccgg atggtcaggt ccaccccgtc aagcgccgag acatcgggcc gcgtcggata
     4081 gtggaaaccc accccctcca gcgcgatccg acccttgacc gggcgcggaa ggggcacggg
     4141 gctggcggga tcggtcagcg catcatgggc gcccagcaat tcggccagac gctcggtcgc
     4201 gccggcggcg cgctgcaatt cgccccagat ttccgacagc gcgccggtgg aactggccac
     4261 gaggatggca tagatcacga actgcaccag ttgcccggcg gtcatcacgc cctggcgcac
     4321 gtcgcgcgcg ccgacccaca acacgccgat cacgccggcg aagatcagga agatcacgat
     4381 ggcggtcatc agcgcgcggg tgcgaattcg ggtcagcgcc acgtcatagg attgttcggt
     4441 cacgccgtcg aactgcgcga tgctgcgcga ttcatgggtg aaggcctgca ccgtctgcgc
     4501 cgccagcagg gtctcggagg cggtgccgga cgaggacgcg atccagtcct gattggcgcg
     4561 cgagagggtg cgcaaccgac ggcccaggac gatgatcggg atcaggatcg cgggcacgat
     4621 cagcaagacc agccccatca gcttgaccga ggtgaaagcc agcatcgcca tcccccccgc
     4681 gaggatcagc atgttgcgca gcgcgatcga ca
//
LOCUS       DTVW01000799            1127 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1980419, whole
            genome shotgun sequence.
ACCESSION   DTVW01000799 DTVW01000000
VERSION     DTVW01000799.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1127)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1127)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1127
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1980419"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..583)
                     /locus_tag="EYO87_10510"
     CDS             complement(<1..583)
                     /locus_tag="EYO87_10510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010396074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxychromene-2-carboxylate isomerase"
                     /protein_id="HIC66411.1"
                     /translation="MANIDYYLGTISPFCYLAGTRLERIAEKHGATVTYKPLDLLQLF
                     DRTGGVRPAERHPSRLQYRAQELPRWAEHLNMPFHFKPAHWPVNMAPSSYAIIAAQQA
                     SASGGGGDLGGLVHGFTRAVWAEERDISEDAVIRDILVAHGFDAGLADSGLFVGAETY
                     GRNLEQAVEAGAFGAPFYVVPEAPLRIGGDPGLR"
     gene            668..>1127
                     /gene="prs"
                     /locus_tag="EYO87_10515"
     CDS             668..>1127
                     /gene="prs"
                     /locus_tag="EYO87_10515"
                     /EC_number="2.7.6.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate diphosphokinase"
                     /protein_id="HIC66412.1"
                     /translation="MPVMTEPKLISGNANMPLAAAIARRMSMHRGMNVSLCDARIERF
                     NDQEIFVEVFENVRGEDMYIIQPTSNPANDNLMELLIMTDALRRSSASRITAVIPYFG
                     YARQDRRAKARTPISAKLVANLLTEAGVDRVLTMDLHAAQIQGFFDIPVDN"
BASE COUNT          209 a          377 c          348 g          193 t
ORIGIN      
        1 cgcgcagacc cggatcgcca cctattcgca gtggcgcctc gggcacgaca tagaagggcg
       61 cgccaaaggc cccggcctcg accgcctgtt ccagattgcg gccataggtc tcggcgccga
      121 cgaacagacc gctatcggcc agcccggcat cgaacccgtg cgcgacaagg atgtcgcgga
      181 tcacggcatc ctcgctgatg tcgcgttcct cggcccagac ggcgcgggta aagccgtgga
      241 ccagcccacc cagatcgccg ccaccgcccg aggccgacgc ctgctgcgcg gcgatgatcg
      301 cgtaggagga cggcgccatg ttcaccggcc aatgcgcggg tttgaagtgg aacggcatgt
      361 tcagatgctc agcccagcgg ggcagttcct gggcgcggta ttgcagccgg ctgggatgac
      421 gctcggccgg ccggaccccg cccgtgcggt cgaacaattg caacaggtcc aggggcttgt
      481 aggtgacggt cgcgccgtgt ttttcggcga tccgctccag ccgcgtcccc gccagatagc
      541 agaacggact gatggtcccc agataataat cgatgttagc cataacggcc tcccttcgcg
      601 gtttgcccgc aggctagccc ggtgctaatg gcagtgcaat cggacgcaaa tgccaaaggc
      661 cccctccatg cccgtgatga ccgaaccgaa gctgatttcc ggcaatgcca acatgccgct
      721 cgccgccgcc atcgcccggc gcatgtcgat gcatcgcggc atgaatgtca gcctctgcga
      781 tgcccggatc gaacggttca acgatcagga aatcttcgtc gaggtgttcg agaatgtgcg
      841 cggcgaggac atgtatatca tccagccgac ctcgaatccg gccaatgaca acctgatgga
      901 actgctgatc atgaccgacg cgctgcgccg gtcttcggcc tcgcggatca cggcggtgat
      961 tccctatttc ggctatgcgc ggcaggaccg ccgcgccaag gcccgcaccc ccatcagtgc
     1021 caagctggtc gccaacctgc tgaccgaggc gggtgtggat cgcgttctga cgatggatct
     1081 gcacgccgcc cagattcagg gctttttcga cattccggtg gacaacc
//
LOCUS       DTVW01000800            2764 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1981920, whole
            genome shotgun sequence.
ACCESSION   DTVW01000800 DTVW01000000
VERSION     DTVW01000800.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2764)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2764)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2764
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1981920"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..775)
                     /locus_tag="EYO87_10520"
     CDS             complement(<1..775)
                     /locus_tag="EYO87_10520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019586208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter ATP-binding protein"
                     /protein_id="HIC66413.1"
                     /translation="MPQIISPTPIDVDRAGRRDAGARHGVFGRSGGEAVQSLVSIQGL
                     QKSFAGVVALSDATLEIRPGEVHALIGQNGAGKSTLIKCLTGVHRRDGGEVWLDGQEF
                     TATGPRHAQSAGIATIYQELNLVPLRSVTENVVMGAEPRNRLGLIDWRAAHARTREVL
                     SRFGIEIDVKERLGAYPSAIQQLVAIARAVSMEARLVIMDEPTSSLDDREIETLFEVV
                     RNLRDSGISVLYVSHSAIGAPRRSLRPCAMTGWRRPGSAT"
     gene            complement(744..1718)
                     /locus_tag="EYO87_10525"
     CDS             complement(744..1718)
                     /locus_tag="EYO87_10525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018690317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HIC66414.1"
                     /translation="MKRRAIFSAALAAAIAATAGSASAEPPPLKQKDRYKVGFAQMES
                     NNPWRIAETKSFKDTAESCNWDLIATDAAGSAAKQVADVDSMIAQGIDVLFLPPREEK
                     PLIPAVKKAKAAGIPTFLVDRSVDESAAKAGEDYVSFLGSDFVDQGRRVADWVIENFK
                     GDKGVIVELEGTTGSSPANDRKSGFDDRIAEDDRFRIVASQSGDFSRDQGRQVMETLL
                     QANPDVNIVYAHNDEMAIGAIQALELAGRKPGKDVMIVSIDGTRDALQAISDGKMGVT
                     VESSPFFGPLACEVMERYASGEKIEPWVQVKDRVFTVENAADNIADAY"
     gene            1906..>2764
                     /locus_tag="EYO87_10530"
     CDS             1906..>2764
                     /locus_tag="EYO87_10530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015316589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HIC66415.1"
                     /translation="MSESFDFIIVGGGSAGCVAAARLAEDGRRRVLVLEGGHSHRHPL
                     LDMPPGIFKMINGSKYMRYHRTVAQSQLGGRVQEIPQANVLGGGSSVNAQVYIRGRPA
                     DFDAWQQGLHGANDNPGWGWPDVLPHFRRMEGNERLADELHGTDGPLLVSDPGHVDEL
                     SRRFVQSVQRLGEPFNPDFNGKSQRGVGFYQFMNRAGRRCSAAYAYVAPLERAPNLDV
                     RLRARVERVVTRDGRAEGVVYRDRHGTEHQVGATGGVILAAGALVTPQLLMLSGIGPG
                     DHLRDHGIEV"
BASE COUNT          497 a          869 c          876 g          522 t
ORIGIN      
        1 aggtcgcaga cccagggcgc ctccagccgg tcatggcgca gggccgcaac gaacgtctgg
       61 gtgcgccaat ggccgaatgc gagacgtaaa gaaccgagat gccgctgtcg cgaaggttgc
      121 gaaccacctc gaacagcgtc tcgatctcgc gatcgtcaag cgacgacgtg ggctcgtcca
      181 tgatgacaag gcgcgcttcc atcgacaccg cgcgcgcgat cgcgacaagc tgctggatcg
      241 ccgatggata ggcgccaaga cgttccttca cgtcgatctc gatcccgaac cgggacagca
      301 cctctcgcgt tcgcgcatgg gcggcgcgcc agtcgatcag gcccagccgg ttgcgcggct
      361 cggcgcccat cacgacgttc tcggtcacgc tgcgcagcgg cacgaggttc agttcctgat
      421 agatcgtggc gattcccgcg gattgcgcgt ggcgcggacc ggtcgcggtg aattcctgcc
      481 cgtccagcca tacctcgccg ccgtcgcgcc gatgaacgcc ggtaaggcat ttgatcaggg
      541 tcgatttgcc ggcgccgttc tgaccgatca gggcgtgcac ctcgcccggc cggatctcca
      601 gcgtggcatc gctgagcgcc acgacaccgg caaaggactt ttgcagcccc tgaatggaca
      661 caagcgattg cacggcttct ccccctgatc gcccgaagac gccgtgccgg gcacccgcat
      721 cgcgtcgccc ggcacggtcg acatcaatag gcgtcggcga tattatctgc ggcattctcg
      781 accgtgaaga cgcggtcctt gacttgcacc cagggttcga tcttttcacc cgaggcgtag
      841 cgttccatca cctcgcaggc gagcgggccg aagaagggcg agctttcgac cgtgacgccc
      901 atcttgccgt cgctgatcgc ctgcagcgcg tcgcgggtgc cgtcgatcga aacgatcatc
      961 acgtccttgc ccggcttgcg gcccgccagc tccagcgcct ggatcgcccc gatcgccatc
     1021 tcgtcattat gggcatagac gatgttcacg tcgggattcg cctgaagcag cgtttccatc
     1081 acttgccggc cctgatcgcg ggaaaagtcc cccgactgcg aggccacgat ccggaagcgg
     1141 tcatcttcgg cgatacggtc gtcaaaacct gacttgcggt cattggcggg cgaggacccg
     1201 gtggttcctt ccagttcgac gatcacgccc ttgtcgccct tgaaattctc gatcacccaa
     1261 tcggcgacgc ggcggccctg atctacgaag tcagatccga gaaaggaaac ataatcctcg
     1321 ccggcctttg ccgcgctctc atcgaccgag cgatcgacga ggaacgtcgg aatgccggca
     1381 gccttggcct tcttgacggc cggaatcagc ggtttttcct cacgcggggg caggaacagc
     1441 acgtcgatgc cttgcgcgat catcgaatcc acatccgcga cctgctttgc ggccgaaccg
     1501 gccgcatcgg tcgcgatcag atcccagttg cagctttcgg cagtgtcctt gaaggatttg
     1561 gtctcggcaa ttcgccaggg attgttgctt tccatctggg cgaagccgac cttgtagcgg
     1621 tccttctgct tcagtggcgg cggttcggcc gaggccgagc ccgcggtggc ggcgatggca
     1681 gcagcaagcg ctgcactgaa aatggcacgt ctcttcatgg catcctcctc ccgtgggtgg
     1741 gcataggccg acccttcaca agtttagtat gaccaaactt gcctcaatta acaattcaag
     1801 ctggaatagg tcaagcttta atgcgatggt cgctaaatat tcgaaagatt gacagaccaa
     1861 agatggcagg acgatggttc tgcggcagcg tcacgagggt tcgaagtgag cgaaagtttc
     1921 gacttcatca tagtgggggg cggctcggcc ggctgcgtgg ccgcggcgcg gcttgccgaa
     1981 gatggacgac ggcgcgtgct ggttctggaa ggcggccatt cccatcggca cccgctgctg
     2041 gacatgccgc ccggcatctt caagatgata aacggatcga aatacatgcg atatcaccgc
     2101 accgtcgcgc agtcacagct gggcggccgg gtgcaggaaa tcccgcaggc gaatgttctg
     2161 ggcggcggat cttcggtcaa tgcgcaggtc tatattcgcg gccggcctgc ggatttcgat
     2221 gcgtggcaac agggattgca cggggccaac gacaatcccg gctggggctg gcccgatgtg
     2281 ctgccgcatt tccggcggat ggaaggcaat gaaaggctgg ccgacgaatt gcacggcacg
     2341 gacggcccgc tgctggtttc cgaccccggt catgtggacg agttgtcgcg gcgattcgtt
     2401 caatccgtgc agcggctggg agagcccttc aaccccgatt tcaacggcaa gagccagcgt
     2461 ggtgtcggct tttaccagtt catgaaccgc gccgggcggc gctgctcggc cgcttacgcc
     2521 tatgtcgcgc cgcttgaacg cgccccgaac ctggacgtgc gtcttcgcgc ccgggtagag
     2581 cgggtggtga caagggatgg tcgcgctgag ggtgtcgtct atcgcgaccg gcacggcacg
     2641 gaacatcagg tcggcgccac cggcggggtc attcttgccg ccggcgcgct ggtgacgccg
     2701 caactgctga tgctgtcggg catcggcccg ggcgatcacc tgcgcgatca cgggatcgag
     2761 gtac
//
LOCUS       DTVW01000801            2346 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1982698, whole
            genome shotgun sequence.
ACCESSION   DTVW01000801 DTVW01000000
VERSION     DTVW01000801.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2346)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2346)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2346
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1982698"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            113..1486
                     /locus_tag="EYO87_10535"
     CDS             113..1486
                     /locus_tag="EYO87_10535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011746995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HIC66416.1"
                     /translation="MLGRYAPHVAATLSLGLPLIGSHLARMAIGVSDTLMVGWHGVES
                     LAALVIATSFVQVLFFLGMGFGTAVMGLMATAIARGDETQVRRVTRMALWLSLGFGLL
                     VMPSMWFSRPVLLGLGQTPVVSQLAQDYLRIAGWGLIANLVALTLNSYLAALERTQVV
                     MWVTLAGLPLNIALNWVFIFGNLGAPELGVRGAAIASLAVQITAAVILALYAGWLPVA
                     RKYELFTRFWRSDWQALCRVFRLGLPIGVTLLAEGALFVASNVMMGWIGTPQLAAHGI
                     ALQLTAITFMAHLGLSNAATIRVGQAKGRDDRRGMHDAAMAVTGLAILFAILFIAIYL
                     GFAAPLVRVFLDPADPQAPMIVSLGVTLVMYAALFQLTDALQVVAVGFLRGVHDTRVP
                     MWIAAFSYWAVGMPVAWGLAFPLGFGPVGLWLGLCAGLSLAAVLLMGRFWSGWARGDW
                     TAPETAR"
     gene            1519..1755
                     /locus_tag="EYO87_10540"
     CDS             1519..1755
                     /locus_tag="EYO87_10540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_354042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HIC66417.1"
                     /translation="MRPVFVQFRCEPGRTYEVAEAIYDREIVSELYSTSGDYDLLAKI
                     YIPEDEDVGRFLSDRLFDIPHISRTLTTMTFRAF"
     gene            1811..>2346
                     /locus_tag="EYO87_10545"
     CDS             1811..>2346
                     /locus_tag="EYO87_10545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66418.1"
                     /translation="MDEIAISEPASPREPVTGDPRGRASRQALLLVLGVLYGNGEYDA
                     LLADLGAERDLFDLPDPRPGGAFRLADEMPRLVERHAMLPPFDPFAPRDEAAIAAQAA
                     ARQAVMDEMTATLYDSADRRVALDLLLLALGHPGASERAAAAISLLDMVSDPALPIAT
                     LAEVVEEDADPLAVRMART"
BASE COUNT          295 a          794 c          825 g          432 t
ORIGIN      
        1 cgccgccgcc tgcctgaggc ggcatccccc gggcgccgcg caaaggccgg ttcccgcgca
       61 tcgtgccaat cgggcgatgg acggcgcagg cgggcgcgga tatggcggga ccatgcttgg
      121 acgttacgcc ccccatgtcg cggcgacgct gtcgctgggc ctgccgctga tcggcagcca
      181 tctggcgcgc atggccatcg gcgtcagcga cacgctgatg gtcggctggc atggcgtcga
      241 atcgctggcg gcgctggtca tcgccacctc gttcgtgcag gtgctgttct ttctcggcat
      301 gggtttcggc accgccgtga tgggcctgat ggccaccgcc atcgcccgcg gcgacgaaac
      361 ccaggtccgc cgcgtcaccc gcatggcgct gtggctgtcc ctgggcttcg gcctgctggt
      421 catgccctcg atgtggttct cgcgccccgt cctgctgggg ctgggccaga cgcctgtggt
      481 gtcgcaactg gcgcaggact acctgcgcat cgcgggctgg gggctgatcg ccaacctcgt
      541 cgcgctgacg ctgaattcct atctggccgc gctggaacgg acgcaggtcg tgatgtgggt
      601 cacgctggcc gggctgccgc tgaacatcgc gctgaactgg gtcttcatct tcggcaatct
      661 cggggcgccg gaactgggcg tccggggcgc cgccatcgcc agcctcgcgg tccagatcac
      721 cgcggcggtg atcctggcgc tgtatgccgg ctggctgccg gtcgcgcgca aatacgaact
      781 tttcacccgc ttctggcggt ccgactggca ggcgctgtgc cgggtcttcc ggctgggcct
      841 gccgatcggc gtcaccctgc tggccgaagg ggcgctgttc gtggcctcga acgtgatgat
      901 gggctggatc ggcacgccgc aactggccgc ccacggcatt gcgctgcaac tgaccgcgat
      961 caccttcatg gcgcatctgg ggctgtcgaa cgcggcgacg atccgggtcg ggcaggccaa
     1021 ggggcgcgac gatcgtcggg gaatgcacga cgccgccatg gcggtgaccg ggctggcgat
     1081 cctgttcgca atccttttca tcgccatcta tctgggtttc gcggcgccgc tggtgcgggt
     1141 ctttctggac cccgccgatc cgcaggcgcc gatgatcgtg tcgctgggcg tgacgctggt
     1201 catgtatgcc gccctgttcc agttgaccga cgcgctgcag gttgtcgcgg tgggctttct
     1261 gcgcggcgtc cacgacaccc gcgtcccgat gtggatcgcg gccttcagct attgggccgt
     1321 ggggatgccg gtcgcctggg gccttgcctt tccgctgggt ttcgggccgg tcgggctgtg
     1381 gctgggcctc tgcgcggggc tgtcgctggc ggcggtcctg ctgatggggc ggttctggtc
     1441 gggctgggcg cggggggact ggaccgcccc cgagacggcg cgctaacctg ccgcccagtc
     1501 ccaacccaag aggtccccat gcgccccgtc ttcgtccagt tccgctgcga gcccggccgc
     1561 acctacgagg ttgccgaggc gatctatgac cgcgagatcg tcagcgaact ttattcgacc
     1621 tcgggcgatt acgacctgct ggccaagatc tatatccccg aggacgagga tgtcggccgc
     1681 ttcctgtcgg acaggctgtt cgacatcccc catatcagcc gcaccctgac cacgatgacc
     1741 ttccgcgcct tctgagcggc gggccgattt tcgtgatatg atccctctgc ctgcaggcgg
     1801 cggagggggc atggacgaga ttgcgatcag cgaacccgca tcgccgcgcg aaccggtgac
     1861 gggcgatccg cggggccggg cctcgcggca ggcattgctg ctggttctgg gcgtgctcta
     1921 cggaaatggc gaatacgatg cgctgctggc cgatctgggg gccgaacgcg acctcttcga
     1981 tctgcccgat ccgcggcccg gcggcgcctt ccgcctggcc gacgaaatgc cgcgccttgt
     2041 cgaacgccat gccatgctgc cgccgttcga tcccttcgcc ccgcgcgacg aggccgcgat
     2101 cgcggcgcag gccgcggcgc ggcaggccgt gatggacgag atgaccgcaa cgctctacga
     2161 cagcgcggat cggcgtgtcg cgctggattt gctgcttctg gctcttggtc atccgggcgc
     2221 aagcgaacgg gccgcggccg cgatctcgct gctggacatg gtcagcgacc ctgctctgcc
     2281 catcgcgacg ctggccgagg tggtcgaaga ggacgccgac ccgctggcgg tgcggatggc
     2341 acgcac
//
LOCUS       DTVW01000802            1461 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1983462, whole
            genome shotgun sequence.
ACCESSION   DTVW01000802 DTVW01000000
VERSION     DTVW01000802.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1461)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1461)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1461
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1983462"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..959)
                     /locus_tag="EYO87_10550"
     CDS             complement(<1..959)
                     /locus_tag="EYO87_10550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007117921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit N"
                     /protein_id="HIC66419.1"
                     /translation="MPIGDLAPEIAVLIAAVAAILWASFASRHLQPGGAAIAIAGLAL
                     AAALLVRQVGQVQFTFSGTWTLDGAGLWMRLMIVAATALSILMAPAWFTTDRRHGEIY
                     PILLLSALGAMGMAGAGDLLQLMISVLLSSVTGYTLAAWHRDWALSVEAGIKYFLLGA
                     LANALLVTGIVLVIGMLGTTGYGDLTARIAEGSPTPLLIAGFALILVGLCFKLGAVPG
                     HAWVPDVAEGAPGPVAAFLTIVPKLAAALALARLMALAPVDMPGVRPLVAVLSAATMT
                     LGNLAALWQQDLRRLLGWSSVAQAGYALMAVAVIGQSGDAVMAL"
     gene            complement(964..>1461)
                     /locus_tag="EYO87_10555"
     CDS             complement(964..>1461)
                     /locus_tag="EYO87_10555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006911981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit M"
                     /protein_id="HIC66420.1"
                     /translation="ARSFALTGAVVEMVAHGLITGALFLIAGGVWARAETYEMDRFGG
                     IAQVAPKMTVAATLAAFASLGLPGLAGFVAEVQIFVGAFAVFPWIAAVALLGILITAA
                     LFLRMLQQMFFGKLSEARAGFADLAPRETTVLAFLLALVVLIGLWPRWLLTLVDGATQ
                     TILGG"
BASE COUNT          301 a          516 c          465 g          179 t
ORIGIN      
        1 agcgccatca cggcgtcgcc gctttgaccg atgaccgcga ccgccatcag tgcgtagccc
       61 gcctgcgcga ccgatgacca tccaagaagc cttcgcagat cctgctgcca cagcgccgcg
      121 agattgccaa gcgtcatggt cgccgcggac aggaccgcca ccagcggcct cacgcccggc
      181 atatcgacgg gggccagcgc catcaatctt gccagggcca gcgcggcagc aagtttcggc
      241 acgattgtca gaaaggctgc gaccgggccg ggtgcgcctt cggccacgtc gggaacccag
      301 gcatggcccg gaaccgcgcc gagcttgaag cacagaccga cgaggatcag ggcgaagccc
      361 gcgatcagca gcggcgtcgg cgacccttcg gcgatacggg cggtaagatc gccgtagccg
      421 gtcgttccca acatgccgat caccagcacg attcccgtca ccagcagcgc gttggccagc
      481 gcgccaagca ggaaatactt gatcccggcc tcgacggaca aggcccagtc ccgatgccat
      541 gcggccagcg tgtagccggt gaccgatgac agcagcaccg atatcatcag ttgcaacaga
      601 tcgcccgcgc ccgccatgcc catcgcgcca agcgccgaca gcagcaagat cggatagatt
      661 tcgccgtgac gccgatccgt ggtgaaccag gccggtgcca tcaggatcga aagcgcggtc
      721 gcggcgacga tcatcagccg catccacaga ccggcgccgt ccaaagtcca ggttccggaa
      781 aaggtgaact gcacctgtcc cacctgccgc accagcagcg ccgcggccag cgccagcccg
      841 gcgatcgcga tcgcggcgcc acccggttgc agatggcggg acgcgaaact ggcccagagg
      901 atcgcggcca ccgccgcgat caggactgcg atttccgggg cgagatcgcc gatcggcatg
      961 gattcagccc ccgaggatcg tctgcgtggc gccgtccacc agcgtcagca gccagcgcgg
     1021 ccagaggccg atcagcacca ccaaagccag caggaacgca agcaccgtgg tttcgcgcgg
     1081 tgcaagatcg gcgaacccgg cccttgcctc ggacaatttg ccgaaaaaca tctgttgcag
     1141 catccgcagg aacagggcgg cggtgatcag aatgcccaga agcgcgacag cggcgatcca
     1201 gggaaagacc gcgaaggcac cgacgaagat ctgcacctcg gccacgaacc cggccagtcc
     1261 cggaaggccg aggctggcga aggcggccag ggtggcggcc accgtcatct tcggcgccac
     1321 ctgtgcaatc ccgccgaagc ggtccatctc gtaggtctcg gcgcgggccc agacaccgcc
     1381 ggcgatcaga aagagcgcgc cggtgatgag accgtgggcc accatctcga ccaccgcgcc
     1441 ggtcagcgca aagctgcgcg c
//
LOCUS       DTVW01000803            1235 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1984749, whole
            genome shotgun sequence.
ACCESSION   DTVW01000803 DTVW01000000
VERSION     DTVW01000803.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1235)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1235)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1235
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1984749"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1003)
                     /locus_tag="EYO87_10560"
     CDS             complement(<1..1003)
                     /locus_tag="EYO87_10560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008182693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HIC66421.1"
                     /translation="MKKQRDKADIVSVARLAGVSAATVSRALNHPQLVHPATRKKIDL
                     AIRKSGYIRNRAAQTIHGRRSATIGLVVPTIADVIFSELIQAFNDAVSARGFTLLLAA
                     HGYDLANEYALVRKLLEHRVDALALIGLDHGADTYRVLREQGLPVLAVWNYDPASMIS
                     CLGVDNAEAGRIAADHLLMLGHRRIAAIFPDTGENDRARLRRAAAMAALQAASIQTPE
                     GWRVRTPYSTAQAKRACLDLLAAADRPTALLCGNDVIAQGALYAALKLGLSVPRDLSI
                     IGIGDFVGSAELEPALTTIRIPARRIGAAAAEHLADSVDSEAGQPLARTRFDCELIMR
                     "
BASE COUNT          208 a          412 c          417 g          198 t
ORIGIN      
        1 cgcgcatgat cagttcgcag tcgaaccggg tgcgggccag cggctgaccg gcctcgctgt
       61 ccacggaatc ggccagatgt tcggcggcgg ccgcgccgat ccggcgcgcc gggatgcgga
      121 tcgtggtcag cgccggctcc agctcggccg agcccacgaa atcgccgatg ccgatgatcg
      181 acagatcgcg cggcaccgac aggcccagct tcagcgcggc atagagcgcg ccctgggcga
      241 tcacgtcgtt gccgcaaagc agcgccgtcg ggcggtcagc cgccgccagc aaatccaggc
      301 aggcgcgctt ggcctgcgcg gtgctgtagg gggtgcggac gcgccagcct tccggcgtct
      361 ggatcgaggc cgcctgcagc gccgccatcg ccgccgcgcg gcgcaggcgg gcgcggtcat
      421 tctcgcccgt atcgggaaag atcgcagcga tccggcggtg gcccagcatc agcagatgat
      481 ccgccgcgat ccgcccggcc tcggcattgt ccacgcccag gcacgagatc atcgaggcgg
      541 gatcgtagtt ccagaccgcc agaaccggca gcccctgttc gcgcaggacg cgataggtgt
      601 cggcgccgtg gtccagcccg atcagcgcca gcgcatcgac ccggtgttcc agcagcttgc
      661 gcaccagcgc atattcgttg gccagatcat agccatgcgc ggccagcagc agggtaaagc
      721 cgcgcgcgct gaccgcatcg ttgaaggcct ggatcagttc cgagaagatg acatcggcga
      781 tggtcggcac caccagcccg atcgtcgcgc tgcgccggcc atggatcgtc tgcgccgcac
      841 ggttgcggat atagcccgat ttccggatcg ccagatcgat cttcttgcgc gtcgcggggt
      901 ggaccagctg gggatggttc agcgcccgcg acaccgtggc cgccgacacg cccgcaagcc
      961 tggccacgga aacaatatca gccttatccc tttgcttttt catcgttccc cggcgacagg
     1021 cagcattttc atgaaaacat ttgcaagact attttcatgt cctatcgtgg agcttgcgat
     1081 ccggcaatgg ctgattggcg gatccgcgcg ggccgggttt gacggccgcg cgaagggggg
     1141 atgaggcaga tgaacatcgc cgatgacatt ctttcggtcg acggggtgat gacccgcgcc
     1201 cgcgccgcgc aggccggata cgaggctcag ggcag
//
LOCUS       DTVW01000804            1947 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1985196, whole
            genome shotgun sequence.
ACCESSION   DTVW01000804 DTVW01000000
VERSION     DTVW01000804.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1947)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1947)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1947
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1985196"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1159)
                     /locus_tag="EYO87_10565"
     CDS             complement(<1..1159)
                     /locus_tag="EYO87_10565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010397569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HIC66422.1"
                     /translation="MIQDNERQAVTTADIREAGPILHFRSHDAAGLSLAALSVRPEGA
                     AAPGPVETKTAKIAPRRIARLAGLDFWRHDFTLAVGEDGYRLDGRLHPVATRLEGDLR
                     IGFVSCNGEEDGDLDRDPQERNLMWSRLLEQHESAPFALLLQGGDQIYADEATKGHPL
                     SEDWPDSVPPDPGAEALEGLRAHLRDRFARRYLRVLTADPCERLFAEIPALSIWDDHD
                     ICDGWGSQPAESTHSAVGRLLFSVAREMYLLFQHAATDADIPDLFWEPSGRNLGWRRD
                     LPGLTIFAPDLRSQRERRQVMGEAGWRPAETLESDAAHVFMVSSVPLLGPRLSLLESV
                     MAVIPKMQHYEDDLRDQWQSRAHRDSWRRMLGAVLRMRQKAAVTVLSGEIHL"
     gene            complement(1199..>1947)
                     /locus_tag="EYO87_10570"
     CDS             complement(1199..>1947)
                     /locus_tag="EYO87_10570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008327497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="AGE family epimerase/isomerase"
                     /protein_id="HIC66423.1"
                     /translation="QPFSDYRGMNANMHGVEALLTAFEATGERDYLRRAGRILDFFVS
                     RTARVEDWRIPEHYSADWQPDRAYAGNPMFRPAGTTPGHSFEMARLHLHHWDLAGRPG
                     NDAPAEARALVETALADAWSDHGGLAYTLHFGGAVDNPTRFWWPVTEAIGALAALAKL
                     EPREDDEKWYRRLWRFADTRLIDHEAGGWFPEADTGCGPATGQFSGKPDIYHALQADL
                     FALTPGLSRHAEGLRIGQPLALTGGFSHGR"
BASE COUNT          334 a          679 c          639 g          295 t
ORIGIN      
        1 ccagatggat ctcgcccgac agcaccgtca ccgccgcctt ctgccgcatc cgcaacaccg
       61 cgcccaacat ccgccgccag gaatcgcgat gggcgcggct ttgccactgg tcgcgcaggt
      121 cgtcctcgta gtgctgcatc ttcgggatga ccgccatcac cgattccagc agcgacaggc
      181 gcggccccag cagcggcacg ctggaaacca tgaagacgtg agccgcgtcg ctttccagtg
      241 tctcggccgg gcgccacccg gcctcgccca tgacctgccg ccgctcgcgc tgcgaccgca
      301 gatcgggcgc gaagatcgtc aggccgggca gatcgcgccg ccatcccagg ttgcgccccg
      361 atggctccca gaacaggtcc ggaatatccg cgtcggtggc ggcgtgctgg aacagcagat
      421 acatctcgcg cgccaccgaa aacagcagcc gacccactgc cgaatgggtc gattcggcgg
      481 gctgagatcc ccagccgtcg cagatgtcgt gatcgtccca gatcgacagc gccggaattt
      541 cggcaaacag ccgttcgcag ggatcggcgg tcagaacccg aagatagcgt cgggcaaaac
      601 ggtcgcgcag atgcgcgcgc agcccctcca gcgcctcggc gccgggatcg gggggcaccg
      661 aatcgggcca atcctcgctg agcgggtggc ctttcgtcgc ctcatcggca taaatctggt
      721 cgccgccctg aagcagcagc gcgaaggggg cggactcgtg ctgttccaga agccgcgacc
      781 acatgaggtt gcgttcctgc ggatcgcgat ccagatcgcc gtcctcctcg ccgttgcacg
      841 aaacgaatcc gatccgcaga tcgccctcca gccgtgtcgc gaccggatgc agccggccgt
      901 ccagccgata gccgtcctcg cccaccgcca gggtgaaatc gtggcgccag aaatccagcc
      961 ccgccagacg ggcgatccgt cgcggggcga tcttggccgt cttcgtctcg accgggccgg
     1021 gcgcggccgc accttccgga cggacgctca gcgcggcaag ggacagcccc gccgcgtcgt
     1081 ggctgcggaa atgcaggatc ggccccgcct cgcggatgtc agcagttgtc acggcttgtc
     1141 tttcattgtc ctggatcatc cagataggca gcgcggggca aaatgtgcag atcctgcatc
     1201 accgcccatg cgaaaacccg ccggtcaggg ctaggggctg gccgatgcgc aatccctcgg
     1261 catgacgcga cagccccggc gtcagcgcga acagatcggc ctgcaaggcg tggtagatgt
     1321 cgggcttgcc actgaactgg cccgtggcag ggccacagcc ggtatcggct tcggggaacc
     1381 aaccgcccgc ctcgtggtcg atcagccgcg tatcggcaaa gcgccagagt cggcgatacc
     1441 atttctcgtc gtcctcgcgt ggctccagtt tcgccagggc ggccagggcg ccgatcgcct
     1501 cggtcaccgg ccaccagaag cgggtcggat tgtccaccgc gccgccgaaa tgcagcgtat
     1561 aggcaagacc gccatgatcg gaccaggcgt cggccagcgc ggtttcgacc agcgcgcggg
     1621 cctcggccgg ggcgtcgttg ccgggccggc cggccagatc ccagtgatgc aggtgcagcc
     1681 gcgccatctc gaaggaatgg ccgggcgtgg tgccggcggg gcggaacatc gggttgccgg
     1741 cataggcgcg atcaggctgc caatcggcgc tgtaatgttc ggggatgcgc caatcttcga
     1801 cccgtgcggt ccggctgacg aagaaatcaa ggatccggcc cgcgcggcgc agataatcgc
     1861 gctcgcccgt cgcctcgaaa gcggtcagca gcgcctcgac cccgtgcatg ttggcgttca
     1921 ttccccggta atccgagaag ggctgcc
//
LOCUS       DTVW01000805            1456 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1985434, whole
            genome shotgun sequence.
ACCESSION   DTVW01000805 DTVW01000000
VERSION     DTVW01000805.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1456)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1456)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1456
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1985434"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..414)
                     /locus_tag="EYO87_10575"
     CDS             complement(<1..414)
                     /locus_tag="EYO87_10575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008559007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HIC66424.1"
                     /translation="MLIWFLPLFLVFLMIGLPVFFGLLAAPGILLVLNGQERDLTLLY
                     RNLYNGMDSFPLMAIPFFMLAGEIMNRGGITHRLVEFSQALMGHFRGGLAHVNVLSSM
                     LFAGLSGSAVADTSALGSMLIPAMERQGYTRRFAAA"
     gene            complement(414..1001)
                     /locus_tag="EYO87_10580"
     CDS             complement(414..1001)
                     /locus_tag="EYO87_10580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006931448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease"
                     /protein_id="HIC66425.1"
                     /translation="MVLLEASIRALSWVNGHLLRIGYGIGIAAITMMVAVTLVQVFFR
                     YVLNNALPWPDEAARFGMLWMTGLMAPIAFRRGGFVAIDILIFALPRAAAAILNIVLL
                     AVSLTVLIVSLKIGWSEVTGLGGRFASASLYLPTSVDFSTWQRLPRSWMMAALPVGIV
                     LLILVNVELILRNLAQVLGLVELPPIPHSETEGAE"
     gene            complement(1055..>1456)
                     /locus_tag="EYO87_10585"
     CDS             complement(1055..>1456)
                     /locus_tag="EYO87_10585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014874433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavin reductase"
                     /protein_id="HIC66426.1"
                     /translation="GDPSGCAAITVNSFSSVSMDPPLVLWSPARRSRRYAQFAEARHY
                     AIHVLAADQHELAFAVARDATALQDLPLGRNGWGVPVLDQCLARFDCHRYAVHDAGDH
                     AIVVGEVLRATMQQGDPLAFFGGRMARIDNN"
BASE COUNT          299 a          504 c          461 g          192 t
ORIGIN      
        1 cgcggcagcg aagcggcggg tatagccctg ccgctccatc gccggtatca gcatcgagcc
       61 aagcgccgag gtatccgcca cggccgatcc ggacagcccc gcgaacagca tcgaggacag
      121 cacgttcaca tgcgccagcc cgccgcgaaa atgccccatc agcgcctggc tgaattcgac
      181 cagccggtgg gtgatgccgc cgcgattcat gatctcgccg gccagcatga agaacgggat
      241 cgccatcagc ggaaagctgt ccatgccgtt gtagaggttg cggtaaagca aggtcaggtc
      301 gcgttcctgc ccgttcagga caagcaggat tcccggcgcc gcgagcaggc cgaaaaagac
      361 cggcaggccg atcatcagga agaccaggaa cagcggcagg aaccagatca gcatcactcg
      421 gcgccctcgg tctcggaatg gggaatgggc ggaagttcga cgagacccag aacctgcgcc
      481 agattgcgca ggatcagttc gacattgacc aggatcagca gcacgatccc taccggcagc
      541 gcggccatca tccagctgcg cggcagtcgc tgccaggtgc tgaaatcgac cgaggtcggc
      601 agatagagcg aggccgaggc aaagcgtccg cccagccccg tcacctcgga ccagccgatc
      661 ttcagcgaca cgatcagcac cgtcaggctg acggccagca gcacgatgtt caggatcgcc
      721 gccgccgcgc ggggcagggc gaagatcagg atgtcgatcg ccacgaagcc gccgcggcga
      781 aaggcgatcg gcgccatcag cccggtcatc cacaacatgc cgaagcgcgc cgcctcgtcc
      841 ggccagggca gggcgttgtt caggacgtag cggaagaaga cctgcaccag cgtcaccgcg
      901 accatcatcg tgatggccgc gatgccgatg ccatagccga tcctcagcag atgcccgttc
      961 acccaggaca gggcccggat cgacgcctcc agcaagacca ttcgctctcc cccctcatgc
     1021 gccgtccccc cctcctcagg gtcgggtggc gcagtcagtt gttgtcgatc cgtgccatcc
     1081 gcccgccaaa gaaggccagc ggatcgccct gttgcatcgt ggcgcgcagc acctcgccca
     1141 ccacaatggc atgatcgccg gcatcatgca ccgcgtaacg gtggcaatcg aaccgcgcga
     1201 ggcactggtc cagcaccggc acgccccagc cgttccggcc cagcggcaga tcctgcagcg
     1261 ccgtcgcgtc ccgggccacg gcaaaggcca gttcgtgctg gtcggcggca aggacatgga
     1321 tcgcgtaatg ccgcgcctcg gcgaattgcg catagcggcg ggaccggcgc gccggcgacc
     1381 acagcaccag cggcggatcc atcgagaccg aggaaaagct gttgacggtg atcgccgcgc
     1441 agccggacgg atcgcc
//
LOCUS       DTVW01000806            1171 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1986426, whole
            genome shotgun sequence.
ACCESSION   DTVW01000806 DTVW01000000
VERSION     DTVW01000806.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1171)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1171)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1171
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1986426"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..837)
                     /locus_tag="EYO87_10590"
     CDS             complement(<1..837)
                     /locus_tag="EYO87_10590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_032489007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tartrate dehydrogenase"
                     /protein_id="HIC66427.1"
                     /translation="MKTYRIASIPADGIGPEVIAAGLQALETLARRDGGFDLDVTEFD
                     WSSARYKETGALMPEDGPEQLKAFDAIFFGAVGAPDVPDHITLWGLRLPICQGFDQYA
                     NVRPTRILPGIQTPLAGVTADDLDWVIVRENSEGEYSGHGGRAHRGMPEEVGTEVAIF
                     TRAAVTRIMRYAFALARSRPRKLLTVVTKSNAQRFGMVMWDEIAAEIAVEFPDVGWDR
                     MLVDAMTVRMVRNPRSLDTIVATNLHADILSDLAGALAGILRLRQHETRIVIDRGIGC
                     NPT"
     gene            complement(857..>1171)
                     /locus_tag="EYO87_10595"
     CDS             complement(857..>1171)
                     /locus_tag="EYO87_10595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018430652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tartrate dehydrogenase"
                     /protein_id="HIC66428.1"
                     /translation="LGPACTGTIGIAPSANINPERRFPSLFEPVHGSAPDIAGQGIAN
                     PVGQIWAGAMMLDHLGQAEAAAQIVAAIERVLAEPALRTRDLGGTADTKTCGAAIADA
                     LA"
BASE COUNT          192 a          402 c          379 g          198 t
ORIGIN      
        1 cgtcggattg cacccaatgc cgcgatcgat gacgatacgc gtttcgtgct gccggaggcg
       61 caggatgccg gcaagcgccc cggccagatc ggacaggatg tcggcgtgaa gattggtcgc
      121 cacgatcgtg tccaggctgc gcgggttcct gaccatgcgc acggtcatcg catcgaccag
      181 catccggtcc cagcctacat cgggaaattc gacggcgatc tcggccgcga tctcgtccca
      241 catcaccatg ccgaaacgct gcgcgttcga tttcgtcacc accgtcagca gcttgcgcgg
      301 ccgcgagcgg gccagcgcaa aggcatagcg catgatccgg gtgaccgccg cgcgtgtaaa
      361 gatcgcaacc tcggtgccaa cctcctcggg cattcccctg tgggcacggc cgccatggcc
      421 ggaatattcg ccctcggaat tctcgcgcac gatcacccag tccagatcgt ccgccgtcac
      481 tccggccagg ggcgtctgga tgcccggcag gatcctggtc ggccggacat tggcatattg
      541 gtcaaagccc tgacagatcg gcaggcgcaa cccccacagc gtgatatgat cgggcacgtc
      601 gggcgcaccg accgcaccga agaagatcgc atcgaaagcc ttcagctgtt cggggccatc
      661 ctcgggcatc agcgcgccgg tttccttgta gcgcgccgaa ctccagtcga attcggtcac
      721 gtccagatcg aacccgccgt cgcgccgggc cagcgtctcc agcgcctgaa ggccggcggc
      781 gatcacttcg gggccgatcc cgtcggcggg aatggatgcg atcctgtagg tcttcatctt
      841 ccgctccgtc atcccgtcag gccagtgcgt cggcgatcgc cgcgccgcag gtcttggtat
      901 cggcggtccc gcccaggtcg cgcgtgcgca gcgccggttc ggccagcaca cgctcgatcg
      961 cggcgacgat ctgcgcggcg gcttcggcct ggcccaggtg gtccagcatc atcgcgccgg
     1021 cccagatctg accgaccgga ttggcgatac cctgtccggc gatatcgggc gccgatccgt
     1081 ggaccggttc gaacagcgac gggaacctgc gttcggggtt gatgttggcc gagggcgcga
     1141 tgccgatggt gccggtgcag gccggaccca g
//
LOCUS       DTVW01000807            1856 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1987297, whole
            genome shotgun sequence.
ACCESSION   DTVW01000807 DTVW01000000
VERSION     DTVW01000807.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1856)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1856)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1856
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1987297"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1536
                     /locus_tag="EYO87_10600"
     CDS             <1..1536
                     /locus_tag="EYO87_10600"
                     /inference="COORDINATES: protein motif:HMM:NF033681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ExeM/NucH family extracellular endonuclease"
                     /protein_id="HIC66429.1"
                     /translation="PRGATTAEDLVRQTDKLVAAITRMDAEVLALQEIENNGFGEDSA
                     IATLVDALNRAEGADVWAFVDPGTGFVGTDAITTGIIYRADQVALKGSAVLDYTESTA
                     ATTWDIVRQIQESTGDFVGDFDRNRPSMAASFEAADGGGITVVANHLKSKGASGLDSL
                     LDAAMAADVDPALIEALRNDPNFDQGDGQGFWNGVRQEAAAELTRWIATDPTGAGSIE
                     NVLLLGDLNSYAMEDPVQALKQASLTDLAGAYLGQEAYSYVFDGQRGTLDYGLASQGL
                     LDNVTGVAEWHINADEPDLFSYSSAFNNAGFYNADPFAVSDHEPILVGVTLDKPVRTV
                     VTGVDFGGGWRFFDRISYSEDGETVARQVVPPIARDLDIKGSDISISAEGTRFGLLTF
                     AGEGLGIYAPLSDRIWKSEAHRIDGPEALRVSMDDGGRLTDATGIALDLTGFGGRGQI
                     RLAFYDDGAAVDEILLKPADRIDYEAAAAFDEVVLSATGKLGFEIAGIDMARIEDDSF
                     DFV"
     gene            complement(1657..>1856)
                     /locus_tag="EYO87_10605"
     CDS             complement(1657..>1856)
                     /locus_tag="EYO87_10605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019015661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="serine--glyoxylate aminotransferase"
                     /protein_id="HIC66430.1"
                     /translation="NGLSRVADKVFRIGHLGDFNDLTLAGTLTGVELGLRKAGVPHRD
                     GGVEAAMAVLDDLAAPGIAAE"
BASE COUNT          319 a          617 c          611 g          309 t
ORIGIN      
        1 ccccgcggtg cgaccacggc cgaggatctg gtccgccaga ccgacaagct ggtcgccgcg
       61 atcacccgga tggatgccga ggtcctggcc cttcaggaga tcgagaataa cggctttggc
      121 gaggacagcg ccatcgccac gctggtcgat gcgctgaacc gggccgaggg cgcggatgtc
      181 tgggccttcg tcgatcccgg caccggcttc gtgggcaccg atgcgatcac caccggcatc
      241 atctatcgtg ccgatcaggt tgcgctgaaa ggctcggccg tgctggatta caccgaatcc
      301 accgccgcga cgacgtggga tatcgtccgc cagatccagg aaagcaccgg cgatttcgtc
      361 ggcgatttcg accgcaaccg cccctcgatg gccgccagtt tcgaggccgc ggatggcggc
      421 gggatcacgg tggtcgcgaa ccacctcaaa tccaagggcg ccagcggtct cgacagcctg
      481 ctggacgcgg cgatggcggc cgatgtcgat cccgcgctga tcgaggcact gcgcaacgat
      541 ccgaatttcg atcagggcga cggccagggc ttctggaacg gcgttcgcca agaggccgcg
      601 gcagagctga cgcgctggat cgccaccgat ccgaccggcg ccggcagcat cgaaaacgtg
      661 ctgctgctgg gtgatctgaa ttcctacgcc atggaagacc cggttcaggc gctgaaacag
      721 gccagtctga ccgatctcgc cggcgcatat ctgggccagg aggcttattc ctacgtcttc
      781 gacggccagc gcggcacgct ggattacggg ctggcctcgc aggggttgct ggacaatgtc
      841 accggcgtcg ccgaatggca tatcaacgcc gacgagcccg atctcttttc ctattcctcg
      901 gccttcaaca acgccggctt ctacaatgcc gatcccttcg cggtatccga tcacgagccg
      961 atcctggtcg gcgtgacgct ggacaagccc gtccggaccg tcgtcacggg cgtcgatttc
     1021 ggcggcggct ggcggttctt cgatcgaatc tcctattccg aggacggcga aaccgtcgcc
     1081 cgccaggtcg tgccacccat cgcccgcgac ctcgacatca agggttcgga catctccatc
     1141 tcggccgagg gaaccaggtt cggcctgctg actttcgccg gcgaggggct gggcatctat
     1201 gcgccgctgt cggatcggat ctggaaatcc gaggcccacc gcatcgacgg acccgaggcg
     1261 ctgcgtgtca gcatggatga cggcggccgc ctgaccgacg cgaccggaat cgcgctggat
     1321 ctgacgggtt tcggcggcag gggccagata cggcttgcct tctacgacga cggtgcggcg
     1381 gtcgacgaaa tcctgctgaa gccggccgac cggatcgatt acgaggcagc ggccgccttt
     1441 gacgaggtgg tcctgtcggc gacgggcaag ctgggtttcg agatcgcggg aatcgacatg
     1501 gcccggatcg aggatgacag cttcgatttc gtctgaccgg aaccggaaaa cggcacagcc
     1561 ggagggcgga tcctgtcgcg gataccggcc tccggttcgc gggtccggcg aggttcaggg
     1621 acccggcggc gcccccgaac tccccggacg cgcgtgctat tcggcggcga taccgggcgc
     1681 cgccagatcg tccagaaccg ccatcgcggc ctcgaccccg ccatcgcgat ggggcacccc
     1741 ggccttgcgc aggcccagtt cgaccccggt cagggttccc gccagcgtca ggtcgttgaa
     1801 atcgcccaga tggccgatcc ggaacacctt gtcggcgacc ctggacaagc cgttgc
//
LOCUS       DTVW01000808            3149 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1987358, whole
            genome shotgun sequence.
ACCESSION   DTVW01000808 DTVW01000000
VERSION     DTVW01000808.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3149)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3149)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3149
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1987358"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..727
                     /locus_tag="EYO87_10610"
     CDS             <1..727
                     /locus_tag="EYO87_10610"
                     /EC_number="2.3.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011747945.1"
                     /note="FabB, beta-Ketoacyl-ACP synthase I, KASI; catalyzes
                     a condensation reaction in fatty acid biosynthesis:
                     addition of an acyl acceptor of two carbons from
                     malonyl-ACP; required for the elongation of short-chain
                     unsaturated acyl-ACP; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase I"
                     /protein_id="HIC66431.1"
                     /translation="IGNGVEQIQMGKQDIVFAGGGEELDWTLSCLFDAMGAMSSKYND
                     TPETASRPYDATRDGFVIAGGGGVVVLEELDHALARGAKIYAEVTGYGATSDGHDMVA
                     PSGEGGERSMRLALETLPEGRELSYINAHGTSTPVGDIGEVNAIRRIFGEGATPPISS
                     TKSLTGHSLGATGVHEAIYCLLMLQNDFIAASANVETLDPAIRPSEIATTRVDEAGLD
                     SVLSNSFGFGGTNASLLLSRYLE"
     gene            756..1544
                     /locus_tag="EYO87_10615"
     CDS             756..1544
                     /locus_tag="EYO87_10615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_354692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HIC66432.1"
                     /translation="MGDLLKGRRGLVMGVANDHSIAWGIARAVAAEGAELAFSYQGEA
                     FGKRVQPLAASVGSDLLLDVDVTDDASLDAAFATLGDRWGKLDFVIHAIAFSNRNELT
                     GRFLNTSRANFKHSLDISCYSLIEIARRAHPLMAEGGSLITLTYGGSNRVTPFYNVMG
                     VAKAALESSVRYLANDLGPDGIRVNAISPGPMKTLAGAAIGGARRTFRHTEMNAPLRA
                     NATLDAIGGTAVWLLSDWGACTTGEIVMVDGGYHVLGMPQSENL"
     gene            1562..2386
                     /locus_tag="EYO87_10620"
     CDS             1562..2386
                     /locus_tag="EYO87_10620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013068375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HIC66433.1"
                     /translation="MPHFVAGDGAKIAYRDAGRGLPVLCLAGLTRNMDDFDYLAPHLP
                     DLRLIRMDYRGRGQSDHTGAATYTVPQEAKDALALLDHLGIGKAALLGTSRGGLIGLL
                     LAAAAHDRLLGLCLNDVGPQIERAGLERIFDYVGRNPSAPTHAALAERLPAAMPGFAN
                     VPAGRWLADARKHYDQTPDGLQIRYDPALREAFLAAFDGEAPDLWPLWRATEGLPVAL
                     IRGANSDLLSPDVAARMRSLRPDTIFAEVPDRAHVPWLDEPESLSVLRRWIAAIQG"
     gene            complement(2377..2853)
                     /locus_tag="EYO87_10625"
     CDS             complement(2377..2853)
                     /locus_tag="EYO87_10625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005640098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase"
                     /protein_id="HIC66434.1"
                     /translation="MLSLIVARAQDGAIGKDNRIPWHIPQDLRMFQRETTGGALIMGR
                     RTWESLPVRPLKNRLNCVLSRDARVAENVFAGLTEAIRFCEDQGHFRVYVIGGHRVFA
                     EALPLADRLLLTEVATTVSGAEAFFPDFDEGDWRQIAARPLQAEPPAIVRELIRQP"
     gene            complement(2856..>3149)
                     /gene="thyA"
                     /locus_tag="EYO87_10630"
     CDS             complement(2856..>3149)
                     /gene="thyA"
                     /locus_tag="EYO87_10630"
                     /EC_number="2.1.1.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008554660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidylate synthase"
                     /protein_id="HIC66435.1"
                     /translation="ADMFLGVPFNIASYALLLVMLAHVTGYEPGDFIHSIGDAHIYLN
                     HLEQVKTQLGRAPRPLPRLELARDVTSIFDFRHDDFRFLDYDPAPAIRAPVAV"
BASE COUNT          543 a          996 c         1063 g          547 t
ORIGIN      
        1 catcggcaac ggcgtcgaac agatccagat gggcaagcag gacatcgtct tcgccggcgg
       61 cggcgaggaa ctggactgga ccctgtcctg cctgttcgac gcaatgggcg cgatgtcctc
      121 gaaatacaac gacacgccgg aaaccgcctc gcgcccctat gatgcgacgc gcgacggctt
      181 cgtgatcgcc ggcggcggcg gcgtcgtggt gctggaagaa ctggaccacg ccctggcgcg
      241 tggcgccaag atctatgccg aagtgaccgg ctacggcgcg acatcggacg gccatgacat
      301 ggttgccccg tcgggcgagg gcggcgaaag gtccatgcgg ctggcgctgg agacgctgcc
      361 cgaagggcgc gagctcagct atatcaatgc ccatgggacc tcgacgccgg tcggcgatat
      421 cggcgaggtc aatgcgatcc gccgcatctt cggcgaaggg gcgacgccgc cgatcagttc
      481 gaccaagtcg ctgaccgggc acagcctggg cgcgaccggg gttcacgaag cgatctattg
      541 tctgctgatg ttgcaaaatg acttcatcgc ggcctcggcg aatgtcgaga ctctggaccc
      601 cgccatcaga ccgagcgaga ttgccaccac gcgggtcgat gaggcgggtc ttgactcggt
      661 gttgtcgaac agcttcggat tcggcggcac caatgcctcg ctgctgctgt ccagatactt
      721 ggaataacag acaaaactac gtcgagggct gtcatatggg cgatcttctg aagggcaggc
      781 gcgggcttgt gatgggggtc gccaacgacc attccatcgc ctggggcatc gcgcgcgcgg
      841 tggcggccga aggcgcggag ctggcgtttt cctaccaggg cgaggctttc ggcaagcggg
      901 ttcagccgct ggcggcctcg gtcggctcgg atctgctgct ggatgtggac gtgaccgatg
      961 acgcctcgct ggatgcggct ttcgcgacgc ttggcgaccg ctggggcaag ctggatttcg
     1021 tcatccacgc gatcgccttt tccaacagga acgaactgac cggccgcttt ctgaacacca
     1081 gtcgcgcgaa tttcaagcac agtctggaca tcagctgcta ttcgctgatc gagatcgccc
     1141 gccgcgccca cccgctgatg gccgaaggcg gttcgctgat cacattgacc tatggcggtt
     1201 cgaaccgggt gacgccgttc tacaatgtca tgggcgtggc caaggcggcg ctggaatcga
     1261 gcgtgcgcta tcttgcgaat gacctggggc cggatggaat ccgggtcaac gcgatatcgc
     1321 ccggcccgat gaagacgctg gcgggggcgg ccatcggcgg agcgcgccgg acctttcgcc
     1381 acaccgaaat gaatgccccg ctgcgcgcca atgccacact ggacgcgatc ggcggaactg
     1441 cggtctggct gctgtcggat tggggcgcct gcacgacggg cgagatcgtg atggtcgatg
     1501 gcggctatca cgttctggga atgccgcaaa gcgagaacct gtagggccgg aagggaaacc
     1561 catgccgcat ttcgtcgccg gggacggcgc gaagatcgcc tatcgtgacg cgggccgggg
     1621 ccttccggtg ctgtgccttg ccgggctgac ccggaacatg gacgatttcg actaccttgc
     1681 gccgcatctt ccggatctgc ggctgatccg catggattat cgcggccgcg ggcaatcgga
     1741 tcataccggc gccgcgacct ataccgtgcc acaggaagcc aaggacgcgc tggcgctgct
     1801 ggatcatctg ggcatcggca aggccgccct tctgggtacc tcgcgtggcg ggttgatcgg
     1861 gctgttgctg gcggccgccg cccatgatcg cctgctgggc ctgtgtctca atgatgtcgg
     1921 tcctcagatc gaacgtgcgg gccttgaacg catcttcgat tatgtcggcc gcaacccttc
     1981 ggcgccgact catgcggcgc tggccgaacg cctgcccgct gcgatgcccg gcttcgcgaa
     2041 tgtccccgca ggccgctggc tggccgatgc gcgaaagcac tacgaccaga cgccggacgg
     2101 gctgcaaatc agatacgacc ctgccctgcg cgaggcattt ctggcggcgt tcgatggcga
     2161 ggcgcccgat ctctggccgc tctggcgcgc gaccgaaggt ttgccggtgg ccctgatccg
     2221 cggcgccaat tccgacctgc tgtcgcccga cgtcgcggcg cggatgcggt ctcttcgccc
     2281 cgacaccatc tttgccgagg tgccggatcg cgcgcatgtc ccctggctgg acgagccgga
     2341 aagcctgtcg gtcctgcgcc gctggatcgc ggcgattcag ggctgacgga tcagttcgcg
     2401 cacgatcgcg ggcggttcgg cctgcagcgg gcgcgcagcg atctgccgcc agtcgccttc
     2461 gtcgaaatcg ggaaagaacg cctcggcgcc ggaaacggtc gtcgcgactt cggtcagcag
     2521 cagccggtcg gccagcggca gcgcctcggc aaagacccga tgaccgccga tgacgtagac
     2581 gcggaaatgg ccctgatcct cgcagaaccg gatcgcctcg gtcagtccgg caaagacgtt
     2641 ttccgccacg cgggcatcgc gcgacaagac gcagttcagc cggttcttca gcggccggac
     2701 aggcaggctt tcccatgtcc tgcggcccat gatcagcgcg ccgccggtcg tctcgcgctg
     2761 aaacatccgc agatcctgcg ggatgtgcca cgggatccgg ttgtccttgc cgatggcgcc
     2821 atcctgcgcg cgggcgacga tcaggctgag catggtcaga ccgccacagg tgcccggatc
     2881 gccggcgcgg gatcgtagtc gagaaaccgg aaatcgtcat ggcggaaatc gaagatcgag
     2941 gtcacgtcgc gggccagttc cagccgcggc agtggtcgcg gcgcgcggcc cagttgcgtc
     3001 ttcacctgtt cgagatggtt cagatagata tgcgcatcgc cgatcgagtg gatgaaatcg
     3061 cccggctcgt aacccgtcac atgagccagc atcaccagaa gcagcgcgta ggaggcgatg
     3121 ttgaacggca cgcccaggaa catgtcggc
//
LOCUS       DTVW01000809            2173 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1987389, whole
            genome shotgun sequence.
ACCESSION   DTVW01000809 DTVW01000000
VERSION     DTVW01000809.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2173)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2173)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2173
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1987389"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..807)
                     /locus_tag="EYO87_10635"
     CDS             complement(<1..807)
                     /locus_tag="EYO87_10635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010392725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AEC family transporter"
                     /protein_id="HIC66436.1"
                     /translation="MSALFTIVLPVFLVIGFGYLVTWRGWFSEGAVDGLMRFAQNFAV
                     PTLLFASMARLDIGSNFQPVLLLSFYLGAFASFLAGWAGAKYLFRRSPADCVAIGFVC
                     LFSNSLLMGVPITERAFGAAALAGNWAIIAIHSPLLYTFGITVMEFTRARGTGLSVGR
                     VALRALTGVLHTPLVIGILSGLAMNALMQAGMTMPEGFWAAVDMISRAALPAALFGLG
                     GILYRYRPEGDMAAIAMCCACSLLLHPAITYGLGRAGGLDTAGLRSAVMTA"
     gene            complement(804..1622)
                     /locus_tag="EYO87_10640"
     CDS             complement(804..1622)
                     /locus_tag="EYO87_10640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HIC66437.1"
                     /translation="MIRATILGCGSSGGVPRLGGRWGACDPTNPKNRRRRCSLLVERN
                     GPQGTTRVLIDTGPDMVPQLLDADVGTLEAVIYTHAHADHVHGIDDIRQLVHNSRRRM
                     PVWAAQPTAQALLDRFSYVFLTPEGSNYPPICELNRIEGPVTIDGAGGAIVFHPFRVT
                     HGEIDALGFRIGGLVYLPDVSDIPDAAWPLIEGAQIFVCDALRLDPHPSHAHLARTLE
                     WLARSGVPRGIVTNMHIDLDHDAVMAMTPDHVIPAHDGMVLDVQDEAPAIAAAL"
     gene            complement(1619..>2173)
                     /locus_tag="EYO87_10645"
     CDS             complement(1619..>2173)
                     /locus_tag="EYO87_10645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_353751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family deoxyribonuclease"
                     /protein_id="HIC66438.1"
                     /translation="ADHPKFVGIGETGLDYHYTAESAAAQAESLRVHIEAARRTGLPL
                     IIHARDADADMARILTEEHRAGPYSCVMHCFSSGPDLAQAALDLGFYLSMSGIAAFPR
                     SSDLRKIFAAAPVDRILVETDSPYLAPPPHRGRRNEPAYVASTAAVGAEVFGMGYADF
                     AKQTCENFDRLFPKAAGQRVGGQP"
BASE COUNT          423 a          709 c          732 g          309 t
ORIGIN      
        1 cgccgtcatc accgccgaac gcagacctgc cgtatccagc ccgccggccc ggcccaagcc
       61 gtaggtgatc gccggatgca gcagaagcga acaggcgcag cacatggcga tcgcggccat
      121 gtcgccttcc ggccggtatc ggtagaggat gccgcccagc ccgaacaggg cggcaggcag
      181 ggccgcgcgc gaaatcatgt ccaccgccgc ccagaagccc tccggcatcg tcatcccggc
      241 ctgcatcagc gcgttcatcg ccagtcccga caggatgcca atgaccagcg gcgtgtgcag
      301 cacgccggtc agagcacgca gggcgacacg gccgaccgaa aggccggttc ccctggcgcg
      361 cgtgaactcc atcaccgtga tcccgaacgt gtagagcagc ggcgaatgga tcgcgatgat
      421 cgcccagttg ccggccagcg ctgccgcgcc aaaggcgcgc tcggtgatcg ggacgcccat
      481 cagcagactg ttcgagaaca ggcagacaaa accgatcgcg acgcaatcgg cggggctgcg
      541 gcgaaacaga tatttcgcgc ccgcccagcc cgccagaaag ctggcgaacg cgccgagata
      601 gaaggacagc agcagcaccg gctggaagtt gctgccgata tccagccgcg ccatggacgc
      661 gaaaagcagc gtcggcaccg cgaaattctg ggcaaagcgc atcagcccgt ccacggcgcc
      721 ttcggaaaac cagccgcgcc atgtcaccag atagccgaag ccgatgacca gaaagaccgg
      781 caggacgatg gtgaacagcg cgctcacagc gcggccgcga tcgcgggagc ctcgtcttga
      841 acgtcaagca ccatgccgtc atgggccggg atgacgtgat cgggcgtcat cgccatgacc
      901 gcgtcgtgat ccaggtcgat atgcatgttt gtcacgatcc cccgcggcac gcccgagcgc
      961 gccagccatt ccagcgtgcg cgccagatgc gcgtggctgg gatggggatc cagccgcagg
     1021 gcatcgcaga caaagatctg ggcgccctcg atcaggggcc aggccgcgtc ggggatgtcc
     1081 gaaacgtcgg gcagatagac caggccaccg atgcgaaagc caagcgcgtc gatctcgcca
     1141 tgggtgacgc ggaagggatg gaagacgatg gcgccgccgg cgccgtcgat cgtgaccggc
     1201 ccctcgatcc ggttcagttc gcagatcggg ggataattgc tgccttcggg cgtcagaaag
     1261 acataggaaa agcgatcgag caatgcctgc gcggtcggct gagcggccca gacaggcatc
     1321 cggcggcggg aattgtggac cagctgacgg atatcatcga taccatggac atgatcggca
     1381 tgggcatggg tatagatcac cgcttccagt gtgcccacat cggcatccag cagttgcggc
     1441 accatgtccg ggccggtgtc gatcagcacg cgtgtcgtgc cctggggccc gttcctttcc
     1501 accagcagcg aacagcggcg gcggcggttc ttcgggttcg tcggatcgca ggccccccag
     1561 cggccgccca gccgcggcac gccccccgac gagccgcaac caaggatcgt ggcgcgaatc
     1621 acggctggcc cccgacccgc tgtcccgccg ccttcgggaa cagccggtcg aaattctcgc
     1681 aggtctgctt ggcgaaatcg gcgtagccca tgccgaagac ctcggccccc acggcggcgg
     1741 tgctggcgac ataggcgggt tcgttgcgcc gtccgcgatg gggcgggggg gccagatagg
     1801 ggctgtcggt ttcgaccagg atacggtcca ccggggcggc agcgaagatc ttgcgcagat
     1861 ccgaggatcg cggaaaggct gcgatgcccg acatggacag gtaaaagccc agatccagcg
     1921 ccgcctgcgc aaggtccgga ccgctgctga agcaatgcat cacgcaggaa taggggccgg
     1981 cgcgatgttc ctcggtcagg atgcgggcca tgtctgcatc tgcgtcgcgg gcatggatga
     2041 tcagtggcag accggtgcgg cgcgcggcct cgatatggac acgcaggctt tcggcctggg
     2101 ccgcggcgct ttcggcggta taatggtaat ccagcccggt ctcgccgatg ccgacgaatt
     2161 tcggatgatc ggc
//
LOCUS       DTVW01000810            1550 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1991192, whole
            genome shotgun sequence.
ACCESSION   DTVW01000810 DTVW01000000
VERSION     DTVW01000810.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1550)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1550)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1550
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1991192"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..631)
                     /locus_tag="EYO87_10650"
     CDS             complement(<1..631)
                     /locus_tag="EYO87_10650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005796700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TrbF"
                     /protein_id="HIC66439.1"
                     /translation="MTIFKRPATHYGKSPEPETPYQKAAQAWDERIGSARVQAKNWRY
                     MAFGSLILSAGFASALVWQSARGTVVPWVVQVDNIGQAQTVAPANADYRATDPQIAFH
                     LGRFIEQVRAIPADAIIVRQNWLRAYEFTTDRGAAALNDYARANDPFTRVGRQQVAVE
                     VSSVIRASPDSFRVAWTERHYENGQLATTERWTAILTIVIQTPRDAERLR"
     gene            complement(628..>1550)
                     /locus_tag="EYO87_10655"
     CDS             complement(628..>1550)
                     /locus_tag="EYO87_10655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005796699.1"
                     /note="type IV secretion VirB6 family; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="P-type conjugative transfer protein TrbL"
                     /protein_id="HIC66440.1"
                     /translation="VVLAFFILAIQLFVTLIEFKLTTLAGFVLIPFGLFGKTAFMAEK
                     VLGNVVSSGIKVLVLAVIIGIGSTLFSQFTAGFGGATPTIDDAMAIVLAALSLLGLGI
                     FGPGIANGIVSGGPQLGAGAAVGTGLAAGGMVLAGGAAAGGGAMLAARGGAAALSGGA
                     AAVRGGASAAGAATAAYSVGSLGQTGAASVASGLGGVARTAGSAAVSPLKRAASKASE
                     SVKSSFSDGARAAFGVTGGTSTAGTVGGASATPAAAPSAVAGSAPAWAQRMQRSQAMN
                     HGTTMAAHAVRSGDSHGSGSSINLSESDRS"
BASE COUNT          258 a          497 c          564 g          231 t
ORIGIN      
        1 cgcgcaggcg ctcggcatcg cgcggcgtct ggatcacgat ggtcaggatc gccgtccatc
       61 gctcggtggt ggcgagctgg ccgttttcgt agtggcgttc ggtccaagcc acgcggaagc
      121 tgtcgggcga tgcccggatg acgctcgaga cctcgacggc gacctgctga cggccgaccc
      181 gcgtgaacgg gtcgttggcc cgcgcatagt cgttcaaggc agccgcgccc ctgtcggtgg
      241 tgaactcgta tgcgcgaagc caattctggc gaacgatgat ggcgtcggcc gggatcgcgc
      301 ggacctgctc gatgaagcgg ccgagatgga aagcgatctg cggatcggtg gcgcgatagt
      361 cagcgtttgc gggcgcgacg gtctgcgcct ggccgatatt gtcgacctgt accacccagg
      421 gcacgacggt cccgcgcgcg gactgccaga caagggcgga agcgaagccg gccgacagga
      481 tcagcgagcc gaacgccata tagcgccagt tcttcgcctg aacacgggcc gagccgatgc
      541 gctcgtccca tgcctgcgcg gctttctgat agggtgtctc gggttccggc gacttgccgt
      601 agtgggttgc tggtcgtttg aagatggtca tgagcggtca ctttcggaaa ggttgatgga
      661 ggaaccggag ccgtggctgt cgccggagcg caccgcatgg gctgccatgg tcgtgccgtg
      721 gttcatggcc tgggagcgct gcatccgctg cgcccaggcc ggagcactgc ctgcgacggc
      781 ggacggtgcg gcggcgggag tagcgctcgc gccgccgacc gtgcctgcgg tggacgtgcc
      841 gccggtcaca ccaaaggcgg cgcgtgcgcc atcggaaaag ctggatttga cgctttccga
      901 tgctttcgac gcggcgcgct tcaagggcga tacagcggca gaacctgcgg tccgcgcgac
      961 accgccgagg ccggaggcga cactggccgc gccggtctgg ccgagcgagc cgacgctgta
     1021 ggcggccgtc gccgcgcctg cggcggaagc acctccgcga acggccgcgg ctccaccgga
     1081 cagagcggcg gcgccgcctc tggcggccag catcgctcca cctcccgccg ccgcgcctcc
     1141 tgcgagcacc atgccgccgg cggcaaggcc ggtgcctacg gccgcacccg cgccgagttg
     1201 cgggccgccc gacacgatgc cgttggcgat gccggggccg aagatgccga ggccgagcag
     1261 cgacagcgcg gcgagcacga tcgccatggc gtcgtcgatg gtcggggttg ccccgccgaa
     1321 accggcggtg aattggctga acaaggtcga gccgatgccg atgatgacgg cgagcaccag
     1381 aaccttgatg ccggacgaca ccacgttgcc caagaccttc tcggccatga aggcggtctt
     1441 gccgaacagc ccgaagggga tcagcacgaa accggcgagc gtggtcagtt tgaactcgat
     1501 cagggtgacg aagagctgga tggcgaggat gaagaaggcc agaaccacca
//
LOCUS       DTVW01000811            1996 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1993048, whole
            genome shotgun sequence.
ACCESSION   DTVW01000811 DTVW01000000
VERSION     DTVW01000811.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1996)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1996)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1996
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1993048"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            79..619
                     /locus_tag="EYO87_10660"
                     /pseudo
     CDS             79..619
                     /locus_tag="EYO87_10660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019298627.1"
                     /note="produces ATP from ADP in the presence of a proton
                     gradient across the membrane; the alpha chain is a
                     catalytic subunit; frameshifted; incomplete; partial in
                     the middle of a contig; missing N-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
     gene            632..1510
                     /locus_tag="EYO87_10665"
     CDS             632..1510
                     /locus_tag="EYO87_10665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit gamma"
                     /protein_id="HIC66441.1"
                     /translation="MPSLKDLKNRIGSVKNTRKITKAMQMVAAAKLRRAQEAAEAARP
                     YADRMAAVMAGLTENAKGSDTAPRLLSGTGSDRKHLLVVMTAERGLAGGFNSSIVKLA
                     RQHADRLRGEGKEVTILTVGKKGREQLRRDYGKQIVSHVDLSDVKRVGYANARQIADE
                     VLERFESGEYDVATIFYNRFESVIRQVPTARQVIPAEMPEGVEEGGASSLYDYEPGEN
                     AILAELLPRSVATQIFAALLENSASEQGARMSAMDNATRNAGDMIDRLTTEYNRSRQA
                     AITKELIEIISGAEAL"
     gene            1528..>1996
                     /locus_tag="EYO87_10670"
     CDS             1528..>1996
                     /locus_tag="EYO87_10670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020055990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HIC66442.1"
                     /translation="MAEAKGKITQVIGAVVDVQFEDHLPAILNALETDNNGKRLVLEV
                     AQHLGENTVRTIAMDASEGLVRGQDVSDTGGPITVPVGDATLGRIINVIGEPVDEGEA
                     IQATETRAIHQPAPDFASQATSSEILVTGIKVIDLLAPYSKGGKVGLFGGAGVG"
BASE COUNT          404 a          621 c          662 g          309 t
ORIGIN      
        1 caacctgact ggattgttcc tgcacctgac cggaggtatc gctgacctgc cggataagct
       61 cgcgcacgcg ctgcacaggc cttcgtcccg atcaactgcg gcgctttgtc agacacgttg
      121 gttgagtcgg aactgttcgg gcacgtgcgg ctcgcgctcg aacacgtcga gtcccgcgcc
      181 cgcgatgcgc ttgtcggtca gccgggtggg gtcgtccgcg cagaccaagg cgatgaaatc
      241 ggtcgccggt ccggtcaagc tggaactggc gcagtatcgc gagatggccg ccttcgcgca
      301 gttcggatcg gatctggatg cggcgacgca gcgtctgctg aatcgcggct cgcggctgac
      361 cgagctgatg aagcagccgc aataccggcc gctgaccaac gccgaaatcg tcatcgtcat
      421 ctatgccggc accaaaggct atatcgacaa ggtgccggtg cgcgaggtcg tggcttggga
      481 agaggggctg atccagttcc tgcgcaacca gaaatcggat ctgctggatg atatcaccaa
      541 gaacgaccgc aaggtggcgg gtgatctgga agatgcgatc aaggcggcgc tggacgaata
      601 caacacgtcg cgcgcctgag agggggaata gatgcccagt ctcaaggatc tgaagaaccg
      661 gatcggaagc gtcaagaaca cgcggaagat caccaaggcg atgcagatgg tcgccgccgc
      721 gaaactgcgc cgcgcgcagg aagcggccga ggccgcgcgc ccctatgccg accggatggc
      781 ggcggtgatg gcggggctga ccgagaatgc caagggttcg gacaccgcgc cccggctgct
      841 gtcgggcacc ggttcggacc gcaagcacct gcttgtggtg atgaccgccg aacgcggtct
      901 ggccggcggc ttcaacagct cgatcgtcaa gctggcgcgg caacatgccg accgcctgcg
      961 gggcgagggc aaggaagtca ccatcctgac cgtcggcaag aagggccgcg agcagttgcg
     1021 ccgcgactac ggcaagcaga tcgtcagcca tgtcgatctg tcagacgtca agcgcgtcgg
     1081 ctatgcgaat gcccgccaga tcgccgatga ggtgctggag cggttcgaat ccggcgaata
     1141 cgatgtcgcc acgatcttct acaaccgctt cgaatcggtg atccgacagg ttccgaccgc
     1201 gcggcaggtg atcccggccg aaatgcccga aggagtcgag gagggcggcg cctcctcgct
     1261 ttacgattac gaacccggcg agaacgccat cctggccgaa ttgctgccgc ggtccgtcgc
     1321 gacgcagatc ttcgcggcct tgctggaaaa ttcggcctcc gaacaggggg cccggatgag
     1381 cgccatggac aacgccacgc gcaatgcggg cgacatgatc gaccgcctga cgaccgagta
     1441 taaccgctcg cgtcaggccg cgatcaccaa ggagctgatc gaaatcattt cgggcgccga
     1501 ggcgctctga tacgtagggg tagagacatg gcagaggcca aaggtaaaat tactcaggtg
     1561 atcggcgccg tcgtcgacgt gcagttcgag gaccacctgc cggcgatcct gaacgcgctg
     1621 gaaaccgaca acaacggcaa gaggctggtg ctggaagtcg cgcagcatct gggcgagaac
     1681 accgtccgca ccatcgccat ggacgcctcg gaaggactgg tccgcggcca ggacgtcagc
     1741 gataccggcg gcccgatcac ggttccggtc ggcgacgcga cgctgggtcg gatcatcaac
     1801 gtcatcggcg aacccgtcga tgaaggcgag gccatccagg ccaccgaaac ccgcgccatc
     1861 caccagcccg cccccgattt cgccagccag gcaacctcgt ccgagattct ggtcaccggc
     1921 atcaaggtca tcgacctgct ggcgccctat tccaagggcg gcaaggtggg gctgttcggc
     1981 ggcgccggcg tcggca
//
LOCUS       DTVW01000812            7052 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1993051, whole
            genome shotgun sequence.
ACCESSION   DTVW01000812 DTVW01000000
VERSION     DTVW01000812.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 7052)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7052)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7052
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1993051"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(918..1304)
                     /locus_tag="EYO87_10675"
     CDS             complement(918..1304)
                     /locus_tag="EYO87_10675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66443.1"
                     /translation="MRAITFLSLLILPLPAQAFIAQNGMDARRIGPTEIAVQFESWAR
                     ETDYWCAAGDFAERRLNLSGKTRLWRATPRPREAGLGIVFTLDPAKKADGAGLSQFGK
                     GPRDGSLSVGAAVGNHCRRVWPFWLD"
     gene            complement(1393..1776)
                     /gene="rbsD"
                     /locus_tag="EYO87_10680"
     CDS             complement(1393..1776)
                     /gene="rbsD"
                     /locus_tag="EYO87_10680"
                     /EC_number="5.4.99.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015867403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-ribose pyranase"
                     /protein_id="HIC66444.1"
                     /translation="MKRGALLNAELSGLVAAMGHGDLLVIGDAGLPVPPDVRVIDLAV
                     TGGVPRLFAVLDAVLSELVVERSAIASEAAPELDRAFRARSIGQIETLPHADFKALTH
                     RARALVRTGEFTPYANIGLWSGVAF"
     gene            complement(1773..2960)
                     /locus_tag="EYO87_10685"
     CDS             complement(1773..2960)
                     /locus_tag="EYO87_10685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009572716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase M19"
                     /protein_id="HIC66445.1"
                     /translation="MLKRILLGAAVLIVAGLAAFLAFAPAYVERSLNPMTMPDQGWPV
                     SAEARALHDRLIIGDWHADPLLWDRDILTRVDRGHTDVPRLLEGNVAVQVFTTVTKSP
                     RGQNYDRNSADAPDNITPLFIGQLRPVRSWFSLKERALVQARALRDAAARAPDRLRLI
                     RTRGDLDALLALRANGTKVLGAILGSEGGHPLEGELANLDVLYAAGFRLIGLTHFFDN
                     ELGGSLHGEGGADAGLTDFGRQVVQAMMDRGMIIDLAHAAPQLVRDVLAIDGTRPILS
                     HTGIRSQCDSSRNLPDDLVTRIGRKGGLIGIGFWSDVNCGGTPEDIAASIRAAIALVG
                     EDRVSLGSDYDGSVDAPFDAAHLVALTQALMDAGLTDDQIAKVMGGNMMRYLRETLPG
                     DET"
     gene            complement(3126..4943)
                     /locus_tag="EYO87_10690"
     CDS             complement(3126..4943)
                     /locus_tag="EYO87_10690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008029592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M3 family oligoendopeptidase"
                     /protein_id="HIC66446.1"
                     /translation="MATLPVFDSTEPAADTRFGDLPVWDLSDLYPGPDAPELTADLAR
                     LADLVNDFAASWQGKLAELDAPAMLDCIEAYQVIDIIAGRLMSYAGLRYYQNTTDAGR
                     AKMLGDLQAKVTDITTPLVFFSLEFNRIPDQTYEAVFTAPDGPARYKPVFDRMRAMRP
                     HQLSDELEQFLHDNSVVGAAAWNRLFDETTAALEFDVDGEVLGMEATLNLLTEHDRAR
                     REAAAHALARVFGDNLKLFARIHNTLAKEKAIEDKWRKMPTPQYGRHLSNHVEPEVVE
                     ALRNAVTAAYPRLSHRYYALKAKWLGLDRLQVWDRNAPLPTEAPRVIAWPEARATVLD
                     AYAGFSPKLAELARPFFDKGWIDAAVTPGKAPGAFAHPTVTTAHPYVLLNYLGKPRDV
                     MTLAHELGHGVHQRLAADQGELLAATPLTLAETASVFGEMLTFRALLAKTTDPAQKKT
                     LLAGKVEDMINTVVRQIAFYDFECKLHAARAEGELTPDDINALWMSVQAESLGPVFDF
                     MPGYETFWTYVPHFVHSPFYVYAYAFGDGLVNALYAAYEDGLPDFQAKYFDMLAAGGS
                     KHHSELLAPFGLDASDPAFWDKGLSMIEGFIDELEALEA"
     gene            complement(5094..5903)
                     /locus_tag="EYO87_10695"
     CDS             complement(5094..5903)
                     /locus_tag="EYO87_10695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010396126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HIC66447.1"
                     /translation="MSCACGHHQPRHETGCEAEGPTIALDRAMIALTGRLICADPAQL
                     MTALTLLPDHVDQSRAEPGCLRFDLRQDEDPLVWHLSELFTDAEAFAAHQQRTKASAW
                     GRDSRDIARDFHRREAMPAIRPERRPDADAISRLLRDAFAGEVEARLVEALRAAGDLS
                     MSLVAEAGGMILGHVGLSPMTGDEAAFALAPVAVAPAMQRRGIGQALVRAALAGAGSR
                     PVVVLGAPDYYARFGFRPADLDSPHAGPFLQVAGDLPAGARIRHAPAFEAV"
     gene            complement(5900..6631)
                     /locus_tag="EYO87_10700"
     CDS             complement(5900..6631)
                     /locus_tag="EYO87_10700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018081453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF72 domain-containing protein"
                     /protein_id="HIC66448.1"
                     /translation="MIRIGIGGWNFAEWRGVFYPHDLPQRRELEYASRQLTSIEVNAT
                     YYGSQKPATFQKWHDETPDDFVFAIKGPRFATNRKVLAESGDSVARFLDSGITKLGAK
                     LGPINWQFAETKRFEPDDFGAFLKLLPDSHEGVALRHAVEPRHDSFAADEAADLCRQH
                     NVAIIRGADADFPEIEADTADFAYWRLMGTTDLEQGYSGADLDKWAKAARKAGKQRDL
                     FLYVISGQKLRNPAAAMALIERLKT"
     gene            complement(6688..>7052)
                     /locus_tag="EYO87_10705"
     CDS             complement(6688..>7052)
                     /locus_tag="EYO87_10705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007816949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="cryptochrome/photolyase family protein"
                     /protein_id="HIC66449.1"
                     /translation="SVYIDAYEWVEAPNTIGMSQFADGGIVGSKPYVSSGNYINKMSD
                     YCGSCAYSVSVRTGETACPFNLLYWDFLIRHRDRFGTNPRMSRIYGNWDRMDADKRRA
                     IRADAAAFLRRMSDGTVV"
BASE COUNT         1317 a         2229 c         2238 g         1268 t
ORIGIN      
        1 ccgcagacgg cgttcattca ggcgttgaag atggatgggt gaaggtgact ggtcccattg
       61 atccagaaat cgatcgtata ctaaatcaac tttcggacga gcggatgttc ggtgttgctc
      121 tactggcctt ttgtcgatct ctcgtgagca atgaggagaa tttctccaag attgccaatt
      181 cctatgccgg gcatgcggca aatttacaga ttatctgcgt actgagggaa attaggctct
      241 ggtgtactag agtgtgggac aagacgggcc actctttgcc cattttagca gaaaaactta
      301 atggcaaggc taaaataatt ctggatgcgc gtaaaaatgc gcttccagaa tggccgcagg
      361 aatacctaga gattccatca ggtttggaat cacttgatgt gtttagggcg cgagttaaag
      421 aactgtcgtg ttcgagcgct atactaggaa ttagaataca tcgcgacgag catcttgctc
      481 atttgcttaa aaatgtttcg ggcgcgaggc gctttgccaa aaaaaatgat attagctcag
      541 attacaacta caatgatgtt tttgagctag ctgaagaatc tatcgccctg atttccgaag
      601 gaatacgcat ctggagattt catgttcacg atgatgcagc ctctttgcgg atatacgaaa
      661 agtactgcaa cgcatactgg atggcgttgc ctagattttc cgaggtagaa cctaaaattt
      721 agagcgtgca gttcttttta ttcccaagtg tttccaaaac tcatccaaat ggtgcgctct
      781 gttccagatt caccttcacg gcccgcgcga acccgcaacc cgtctcgccc gcgctcttgc
      841 cacaatacag gacagtcacg gaacggtccc accggcaacc ggcgcgagaa gcgcgatttg
      901 cctcgccgcc tgcctgttca gtccagccaa aaaggccaca ccctgcggca atggttgccg
      961 acggccgcgc cgaccgaaag tgagccgtcg cgcggaccct ttccgaattg cgacaggccc
     1021 gcgccatcgg cctttttcgc cgggtccaat gtgaagacga tgccgagccc ggcctcgcgc
     1081 ggcctgggcg tggcacgcca caggcgggtc ttgcccgaga ggttcagccg gcgttcggcg
     1141 aaatcgcccg cagcgcacca gtaatcggtt tctcgcgccc agctttcgaa ttggacggcg
     1201 atttcagtcg ggccgatccg gcgcgcatcc atgccgttct gggcgatgaa agcctgcgcc
     1261 ggcagcggca ggatcagcag ggaaagaaaa gtgatcgcgc gcatcggaac aacccccgtt
     1321 ctttcgagaa taaccggttg ggccggggcc gcaagtcccc gaggcgcgcc gttcggccgg
     1381 cgatggcttt ccctagaacg ccacgccgga ccagaggccg atattggcgt agggcgtgaa
     1441 ctcgcccgtc cgcacaaggg cacgggcccg atgcgtcagg gccttgaaat cggcatgagg
     1501 caacgtttcg atctgcccga tgctgcgcgc gcgaaaggcc cggtccagtt cgggcgcagc
     1561 ctcgctggcg atggccgaac gctcgaccac cagttcgctc agcacggcat ccagaacggc
     1621 aaacagcctg ggaacgccgc cggtcacggc caggtcgatc acccgcacgt ccggcggcac
     1681 cggcaggccc gcgtcgccga ttaccagaag atcgccatgg cccatcgcgg cgaccagccc
     1741 cgacaattcg gcattcagca acgcaccgcg tttcatgtct cgtctcccgg cagggtttcg
     1801 cgcagatagc gcatcatgtt gccgcccatc accttggcga tctggtcgtc ggtcagcccc
     1861 gcatccatca gagcctgcgt cagcgcgacc agatgcgcgg cgtcgaaagg cgcatcgacc
     1921 gagccatcgt agtccgagcc cagcgaaacc cgatcctcgc ccacgagcgc gatcgcggcc
     1981 cggatcgagg cagcgatgtc ttcgggcgtg ccaccgcaat tcacgtccga ccagaagccg
     2041 attccgatca gcccgccttt ccgcccgatc cgggtgacaa gatcgtcggg caggttgcgg
     2101 ctgctgtcgc attggctgcg gatgccggtg tgggacagga tcgggcgggt gccgtcaatc
     2161 gccagcacgt cgcggaccag ttgcggcgcg gcgtgggcca ggtcgatgat catgcctctg
     2221 tccatcatcg cctgaaccac ctgccggccg aaatcggtca ggccggcgtc ggcgccgccc
     2281 tcgccatgca ggctgccgcc caattcgttg tcaaagaaat gcgtcagtcc gatcagccgg
     2341 aacccggcag cgtagagaac gtccagattg gccagttcac cctccagcgg gtggccgccc
     2401 tcgctgccca ggatcgcgcc cagaaccttt gtgccattcg cgcgcagggc cagaagcgcg
     2461 tccagatcgc cgcgcgtccg gatcagccgc agcctgtcgg gcgcgcgcgc ggccgcatcg
     2521 cgcagggccc tggcctggac cagcgcgcgt tccttcagcg agaaccagga ccggaccggc
     2581 cgcaactggc cgatgaacag cggcgtgatg ttgtcggggg catcggcgct gttccggtca
     2641 tagttctggc cgcgcgggct tttggtgacg gtggtgaaga cctgcaccgc gacattgcct
     2701 tccagcaggc gcggcacatc ggtatggccg cggtccacgc gcgtcaggat atcgcgatcc
     2761 cacagcagtg gatcggcatg ccagtcgccg atgatcaggc ggtcatgcag cgcgcgggcc
     2821 tcggcgctga cgggccagcc ttgatcgggc atggtcatcg ggttcagcga ccgttcgaca
     2881 taggcgggcg cgaaggcaag aaaggcggcc agcccggcca cgatcagaac cgctgctccc
     2941 agaaggatcc gtttcagcat ccggtctccg tcatgtgtcc ctgcgccagc atagcgcagc
     3001 gggcgggcag aaccatgaca aagcgccccg cgaaggagag gaaaaaggac aaggggcgca
     3061 acagagtgac gtgacaccgg tggcggcgca ttcggcagca aggtcgccgg tcgcggggcg
     3121 gcggatcacg cctccagtgc ttccaattcg tcgatgaaac cctcgatcat cgacaggccc
     3181 ttgtcccaga aggccggatc ggatgcgtcc agcccgaagg gcgccagcaa ttcgctgtgg
     3241 tgcttggacc cgcctgccgc cagcatgtcg aaatacttcg cctgaaagtc cggcaacccg
     3301 tcctcgtagg ccgcgtaaag cgcgttcacc agcccgtcgc cgaaggcata ggcatagacg
     3361 tagaacggcg aatggacgaa atggggcaca taggtccaga aggtttcata gcccggcatg
     3421 aaatcgaaga ccgggccaag gctttcggcc tgcacgctca tccacagggc gttgatgtcg
     3481 tcgggggtca gttccccctc ggcgcgggcc gcgtgcagct tgcattcgaa atcgtaaaag
     3541 gcgatctgcc ggacgacggt gttgatcatg tcttcgacct tgccggccag cagggtcttt
     3601 ttctgtgccg gatcggtggt cttggccagc agcgcgcgga aggtcagcat ctcgccaaag
     3661 accgatgcgg tttcggcaag cgtcagcggc gtcgcggcca gcaattcgcc ctgatccgcc
     3721 gccagccgct gatggacccc gtggcccagt tcgtgggcca gcgtcatcac gtcgcgcggt
     3781 ttgccgagat agttcagcag gacataggga tgcgcggtcg tcaccgtggg atgggcaaag
     3841 gcgccaggcg ccttgccggg cgtgacggcg gcatcgatcc agcccttgtc gaaaaatggc
     3901 cgggccagtt cggcgagttt gggcgagaaa ccggcatagg cgtccagcac ggtggcgcgg
     3961 gcctcgggcc aggcgatgac gcgcggcgcc tcggtcggca gcggcgcgtt gcggtcccag
     4021 acctgcaacc tgtccagccc cagccatttt gccttcagcg cgtaatagcg gtgcgaaagg
     4081 cgcggatagg cggcggtgac ggcgttgcgc agtgcctcga ccacctcggg ctcgacatgg
     4141 ttggacagat ggcggccata ttgcggcgtg ggcatcttgc gccacttgtc ctcgatggcc
     4201 ttttccttgg ccagcgtgtt gtggatgcgg gcaaacagct tgagattgtc gccaaagacg
     4261 cgggccagcg catgggccgc ggcctcgcgc cgggcgcggt catgttcggt cagcaggttc
     4321 agcgtggctt ccatccccag cacctcgcca tcgacatcga attccagcgc ggccgtggtt
     4381 tcgtcgaaca gccggttcca ggcggcggcg ccgacaacgg aattgtcgtg caggaactgt
     4441 tccagttcgt cggacaattg gtgcggacgc atggcgcgca tccggtcgaa gaccggcttg
     4501 tagcgggcgg gaccgtcggg cgcggtaaac acggcctcgt aggtctggtc cggaatgcgg
     4561 ttgaattcaa ggctgaagaa gaccagcggc gtggtgatgt cggtgacctt cgcctgcaga
     4621 tcgcccagca tcttggcgcg gccggcatcg gtggtgttct ggtaatagcg caggcccgca
     4681 taggacatca gccgtccggc gataatgtcg atcacctgat aggcctcgat gcagtccagc
     4741 atggcgggcg catccagttc ggccagcttg ccctgccagg aggcggcgaa atcattgacc
     4801 agatccgcaa gccgggccag atccgccgtc agttccggcg cgtcgggacc gggatagaga
     4861 tcgctcagat cccagacggg cagatcgccg aaacgggtat cggcggcagg ttcggtagaa
     4921 tcgaagaccg gcaaggtggc catgagcatg tcctttcgct ttggcctcag atgtaacctg
     4981 catggccctg tgtgcaaggc ttgcgcgacg ctgcgaccgg gcggggcggc gcagccgccc
     5041 gcgaaagccg gtcccctcga tggggccggc tttcgcagcc cgtttgcccc ggcctagacc
     5101 gcctcgaagg caggtgcgtg acggatcctg gcaccggcag gcagatcgcc ggcgacctgc
     5161 aggaagggtc cggcatgggg cgaatccaga tccgccggac gaaagccgaa gcgggcatag
     5221 taatcgggtg cgcccagcac cacgaccgga cgcgacccgg ccccggccag tgccgcgcgg
     5281 accagcgcct gcccgattcc gcgccgctgc atggcaggcg cgacggcaac gggggccagc
     5341 gcaaaggccg cttcatcccc ggtcatgggc gacagcccga catggccgag gatcattccg
     5401 cccgcctcgg cgaccagcga catcgaaaga tcaccggccg cgcgcagcgc ctcgaccagc
     5461 cgcgcctcaa cctcgcccgc gaaggcatcg cgcagcaggc gcgagatcgc gtccgcatcc
     5521 gggcgcctct cgggccggat cgcaggcatc gcctcgcgcc tgtggaagtc gcgtgcaata
     5581 tccctgctgt cgcggcccca ggcgctggcc ttcgtgcgct gctgatgggc tgcaaaggcc
     5641 tcggcatcgg tgaacaattc cgacagatgc cagaccagcg gatcctcgtc ctgccgcaga
     5701 tcgaaacgca ggcatcccgg ttcggcccgg ctctgatcga catgatccgg cagcagcgtc
     5761 agcgcggtca tcaactgcgc cggatcggca cagatcaacc ttccggtcag cgcgatcatc
     5821 gcccgatcca gcgcgatcgt cgggccctcg gcctcgcagc cggtttcgtg gcggggttgg
     5881 tgatggccgc aggcgcagct catgtcttca gcctttcgat cagagccatc gcggcggccg
     5941 ggttgcgcag cttctgaccc gagatgacgt agagaaacag gtcgcgctgc ttgcccgcct
     6001 tgcgtgcggc cttggcccat ttgtcgagat cggcccccga atagccctgt tccagatccg
     6061 tcgtgcccat caggcgccaa taggcgaaat cggcggtatc ggcctcgatt tccggaaagt
     6121 ccgcatcggc gccgcgaatg atggcgacat tgtgctgccg gcacagatcg gcggcctcgt
     6181 cggcggcgaa actgtcatgg cgcggttcca ccgcatgccg cagggcgacg ccctcgtggc
     6241 tgtcgggcag cagcttcagg aaggcaccga aatcgtccgg ctcgaatctc ttcgtctccg
     6301 cgaattgcca gttgatcgga cccagcttgg cgcccagttt cgtgatgccg gaatcgagaa
     6361 accttgccac gctgtcgccg ctttcggcca gcaccttccg gttggtggca aagcgcggcc
     6421 ccttgatcgc gaagacgaaa tcatcgggcg tctcgtcatg ccatttctgg aacgtcgcgg
     6481 gcttctggct gccgtaatag gtcgcgttca cctcgatcga ggtcagttgc ctgctggcat
     6541 attccagttc gcgccgctgg ggcaggtcgt ggggatagaa gaccccgcgc cattccgcga
     6601 aattccagcc gccgattccg atgcggatca tctgtgcctc cggatggtct gacccttcta
     6661 tcccgcgcgg cgcgatccgc cgtcaagtca gaccaccgtg ccatccgaca tgcgccgcaa
     6721 gaaggcggcg gcatcggcgc ggatcgccct gcgcttgtcc gcatccatgc ggtcccagtt
     6781 gccatagatc cgcgacatgc ggggattggt cccgaaccgg tcgcggtggc ggatcaggaa
     6841 atcccagtaa agcaggttga acgggcaggc cgtctcgccc gtcctgacgc tgaccgaata
     6901 ggcgcaactg ccgcaataat ccgacatctt gttgatgtag ttgcccgaac tgacataggg
     6961 cttgctgccg acgattccgc catcggcgaa ctggctcatc ccgatcgtgt tcggcgcctc
     7021 gacccattca taggcatcga tatagacgga ca
//
LOCUS       DTVW01000813            2783 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1995911, whole
            genome shotgun sequence.
ACCESSION   DTVW01000813 DTVW01000000
VERSION     DTVW01000813.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2783)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2783)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2783
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1995911"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(805..999)
                     /locus_tag="EYO87_10710"
     CDS             complement(805..999)
                     /locus_tag="EYO87_10710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012365127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66450.1"
                     /translation="MPAPPNPRPRRRNPRRPRLPLRQRRRPNQPNRRFWTRSPRPIRQ
                     RRPVSRTKPRPSPIHKPMAR"
     gene            2275..>2783
                     /locus_tag="EYO87_10715"
     CDS             2275..>2783
                     /locus_tag="EYO87_10715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF541 domain-containing protein"
                     /protein_id="HIC66451.1"
                     /translation="MTGLSWKRGPAALAAGAALAAMISGPALSAPQAGKAAHDARLMC
                     GGQMSRLSVSGTGEARIAPDMATIQLGVTTRADSAADAMRSNATQQSAVIEALKAADI
                     AERNIQTSGLSLNPVMDYSRDRAPTVTGYEASNMVSVRVGDIARLGEVLDAIVGAGAN
                     QISGIEFTR"
BASE COUNT          387 a          908 c         1056 g          432 t
ORIGIN      
        1 ccagatcgtg cgtggtcatt aacacagtgc gaccggcagc cgcgaccgcc tttagtacgt
       61 cgtccaacat cgcagtagca tcctgatcaa ggccggtagg accgacctct gccttgcgca
      121 gatcgcgcag caattgcagc gccgactggc gttcggcccg ggtcagctgc ttgggctgac
      181 catcctcggc cgcgctgcct tcctcgatcg aacccagatt gtcggggcgc gagggaggac
      241 ggcgcgacga gccggccggc ctggtggccg gaacctcggg cggggtggtc gccgccgatg
      301 cgggcgccgg tgtcgccgcg gggcgcgctg tcgcgggggt tgcgcgcggc gtgccggcgg
      361 cgggccgctc tggcgggcgg ataccggcga cgcgcggcgg ttcgggctgg ctgcgctgtg
      421 cgaagggttg cggatcgcgc ggcacgctgg gaacaccatc cgggcgggcg ggctgcgttg
      481 cccgcgccgg cgcggcgcgc ggcggacggg cggaactggc cagattgtga gccgcggccg
      541 gtgcgtcggg ggcggccgcc gcctcggggc cgggctgcct ttccgccgtt ggggccgcgg
      601 tgggccggtc cgccgttgtc gtcgcagccg tggcagtttc gggcgtggct gtgccggtgg
      661 gggcgttttc cagcgcagcg ctggccatcg tcgcggcgct gaccgggctg gacccggccc
      721 cggcgggttg ttgtgaaacc ggctgccgcg aggcagcttc cgcgacggat tgttgctgtg
      781 tcatcgcctc gcgcaacgcg cgggtcagcg cgccatcggc ttgtgaatcg ggctgggccg
      841 gggctttgtc cgggacaccg gccgccgctg ccggatcggc cgaggcgatc gtgtccagaa
      901 ccggcggttc ggctggttcg gacggcgtcg ttgccgcagc ggtaaccgcg ggcgtcgcgg
      961 gttccggcgc cgtggccgcg ggttcggcgg ggctggcaat ccctgtcttg tcgccgcggc
     1021 cgccgaaaag gacaagaacc agcaccagca tcccgaccag cgcggccatc agcacagaaa
     1081 gacgacccgg gttgaactga cgcaggcgca tcagcaacgc ggacgcggcc ggggcggcgg
     1141 gttcgctttc gcggcgggcg cgggcgtcgc cggcgcgggc atggatcgcc tcggcgcggg
     1201 gggacagacg cggtttcggg cctccgacag gcaagggcgt ggcgatcggc ttgcgctcgc
     1261 catgccggat caccggcgct gcggagggat ccgtatccgg cacggcggcc atgtccgcgc
     1321 gcccggcccg cgcatcgccc gcgcttttcg tggatgattg ttccaagtca ttggacgggg
     1381 caccttcggc cgatgcggca gcaggctgaa ccggcgccgc gtctggcagc cgtcccgcag
     1441 gcgcaacggg cgccacatgc ggcacgatgc gcgagatcgc ggccggggcc cgcgggccgt
     1501 catcggtgat gaccggggcg gtgatgcgcg cccggctgag atcgggctgg ctgaacggcg
     1561 gtctttctgt ttgctgccgc gccagcttgc tcagcccgaa atcgggcagg ccgtcaaagc
     1621 gttcatcgcc tggccgcgag agatagccgg aggggcggaa tccctgcgcg cgggcgaatt
     1681 cctcggcctc gtccagcgtg cggcgggcga cggcggccac ccgcagcgtc tcgatgtctc
     1741 cattggcagc ggggcaccag tcgaaggcca gatcctcggc ccggtagggg gtcatcgatt
     1801 cgaggatccg cccgatcacg gtcggcgtgt cggatccgac cggcaccgtc accgaggtat
     1861 agagaacctg atcgtcggga atcaccagaa cgacgtcggc ggcatcgtcg ccgctgccgc
     1921 ctgcctcgtc gcgcagcgcg ttcaatgtcg cggccatgcc gccgcccgcg aacagcgcct
     1981 gtcccacggg ctgccagtca tggccctcgc gacgttccag acaaaccgcg tcctgggtaa
     2041 agctcatggc gaattcgggt ccggcggcgc gctggttcat gatggtctgt cgctcgatgt
     2101 tatgtcgtcg cgggtctttt gccgcgatct gttggcaatg tcgcgaatct actgcaattt
     2161 gtggggtgag aaaagcaaat ctggcgtatc tgtgatcagc gcccgcggaa acatccgggg
     2221 ccggcgcggc gttgcctgcg cagtcttcgg caacgggaaa gagagaacgg cgaaatgaca
     2281 ggactttcat ggaagcgcgg ccctgcggcg ctggccgccg gggcggcgct ggccgccatg
     2341 atttcggggc cggccctgtc cgctccgcaa gcgggcaagg cggcgcacga tgcgcgcctg
     2401 atgtgcggtg gccagatgtc gcggctttcg gtcagcggca cgggcgaggc gcggatcgcg
     2461 cccgacatgg cgacgatcca gctgggggtc accacccgcg ccgacagcgc cgccgatgcg
     2521 atgcgcagca atgcgaccca gcagagcgcg gtgatcgagg cgctgaaagc cgccgacatc
     2581 gctgaaagga acatccagac ctcggggctg agcctcaatc cggtgatgga ttacagccga
     2641 gaccgcgcgc ccacggtgac gggctacgag gccagcaaca tggtttccgt ccgggtcggc
     2701 gacatcgcgc gtctgggcga ggtgctggat gccattgtcg gcgccggggc gaaccagatc
     2761 agcggtatcg aattcacccg cga
//
LOCUS       DTVW01000814            1347 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1996362, whole
            genome shotgun sequence.
ACCESSION   DTVW01000814 DTVW01000000
VERSION     DTVW01000814.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1347)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1347)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1347
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1996362"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..196)
                     /locus_tag="EYO87_10720"
     CDS             complement(<1..196)
                     /locus_tag="EYO87_10720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008032731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HIC66452.1"
                     /translation="MPTIQQLIRKPRQPKVQRSKSQHLQGCPQKRGVCTRVYTTTPKK
                     PNSAMRKVAKVRLTNGFEVIS"
     gene            complement(431..1282)
                     /locus_tag="EYO87_10725"
     CDS             complement(431..1282)
                     /locus_tag="EYO87_10725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011747097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66453.1"
                     /translation="MRVQMLGLCRFSYVGLRGYQVEHDSYQERRAHLYDPDRLARRWF
                     WFSEVALPAWRAQTDPDFTLVVMTGPDLPEPWLSLLRDLCLEVPQLRLELIPPMQWHL
                     AACRAAIMPHVDPRAEVIGHFRHDDDDAVAVDYIAAARRDFRRIKALWKVDRKLSLDY
                     SRGLMIEFAEGRLKVTPRICHNMGVALTIFLGPEAAETALHYDHSRLPQWMPGVAVTR
                     PLMFLRSIHGDSDSGAMGPGLPWTMDDDQALDRQLRQRFRLRRTSLERQAAALPRVDP
                     SRPGRSC"
BASE COUNT          249 a          447 c          423 g          228 t
ORIGIN      
        1 aggaaatgac ctcgaagcca ttcgtcaggc gcaccttggc gaccttgcgc atggccgagt
       61 tcggcttttt cggcgtcgtc gtatagacgc gcgtgcagac gccacgcttc tgcgggcatc
      121 cttgcaggtg ctgcgacttg ctgcgctgca ccttgggctg ccgcggcttg cggatcagct
      181 gttgaatcgt cggcattcgg ttccccgtct tgcttctcgt caatactcgc agccggtcgg
      241 ctgcgccact tctcgacggc gatctgcgcg aatcgcaaaa cgccaaaacc atccggcccc
      301 atggcggggt ggacgggtca aattccagag gatcggggcg ttcggacccg gatcgtgacc
      361 acacaggttc tggtgcccga tgcggttgcc cgccgggtga cggggcgtat agggggaatc
      421 ggagaggctg tcaacacgac cgccccggcc gcgaaggatc aactcgcggc agcgccgcgg
      481 cctgccgttc cagcgacgtg cggcgcagtc ggaatctttg gcgcagttgc cggtccagcg
      541 cctgatcgtc atccatggtc cagggcaggc ccggccccat ggccccggaa tcgctgtcgc
      601 catggatcga gcgcaagaac atcagcggtc tggtcacagc gacgccgggc atccattgcg
      661 gcagcctgga atggtcgtaa tgcagtgccg tctcggcggc ctcggggccg agaaagatgg
      721 tcagggccac acccatgttg tgacagatgc gcggcgtgac cttcagcctg ccctcggcga
      781 attcgatcat cagcccgcgc gaataatcca gcgacagctt gcgatccacc ttccacaatg
      841 ccttgatgcg gcgaaaatcg cgccgcgccg cggcgatgta atcgaccgcc accgcatcgt
      901 cgtcatcgtg gcggaaatgg ccgatcacct cggcccgcgg atcgacatgg ggcatgatcg
      961 ccgcccggca agcggccagg tgccattgca tcggcggaat cagttccagc cgaagctgcg
     1021 gaacctcgag gcaaagatcg cgcagcagcg acagccacgg ctctggcaga tcgggtccgg
     1081 tcatcaccac caaggtgaaa tcgggatcgg tctgcgcgcg ccaggccggc agcgcgacct
     1141 cgctgaacca gaaccagcgc cgcgccagcc tgtcgggatc atagagatgg gcgcggcgtt
     1201 cctgatagct gtcatgttcg acctgatagc cacgcagtcc cacataggaa aagcggcaaa
     1261 gccccagcat ttgaacccgc atcgcgacta ccgccttccc agctgcgcct cgcgccagat
     1321 cgtgtagacg cccgcaccca ccaccag
//
LOCUS       DTVW01000815            1505 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1997701, whole
            genome shotgun sequence.
ACCESSION   DTVW01000815 DTVW01000000
VERSION     DTVW01000815.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1505)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1505)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1505
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1997701"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            30..908
                     /locus_tag="EYO87_10730"
     CDS             30..908
                     /locus_tag="EYO87_10730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007256154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HIC66454.1"
                     /translation="MNLEQRTALTGIGFVTPTVIVIALILIYPIIQSVVLSFGQSSID
                     GSEPYRFVGLRHYATLMGDGRFWNALAVTFTFTALSIPLELALGIGLALLMNESFRGK
                     GLARLAVLFPWALPTALNALIWRWMYNSDYGLFNAVALQSGLADRPINFLGDTSLAMA
                     SMVVVAVWKTSSFMALIILAGLQSIPRDLFEAGRMDGMTKWQEFTQITLPLLKGPILV
                     ALIIRSMDALRTFELPFNLTDGGPVNATESLSLYAYKAIFDFLDFNFGAAVVVVQFLV
                     IFAMSLIYVFALRNKD"
     gene            913..>1505
                     /locus_tag="EYO87_10735"
     CDS             913..>1505
                     /locus_tag="EYO87_10735"
                     /inference="COORDINATES: protein motif:HMM:PF00528.20"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HIC66455.1"
                     /translation="MQKRPRYGLYAIVALSVLISFFPIVWLILTSFKNTAGIYAWPPQ
                     YWPDPFTFENYVSIFTNSPELLRYILNSFIVGVGATAVTLLLGGMAAYALSRLGLRFA
                     GVLMVAILAVSMFPPVSLLPSLFQNFLNFGLLNTYTGLVLAHAGLFLPFTVWMLASYF
                     ATLPVEIEEAARMDGMGFLRIFLTIVLPLSWPGFVATG"
BASE COUNT          251 a          456 c          442 g          356 t
ORIGIN      
        1 aaagaaatgg gccggacatg aaccgcacca tgaatctgga acagcgcacg gcgctgaccg
       61 ggatcggctt tgtcacgcca accgtgatcg tcatcgcgct gatcctgatc tatccgatca
      121 tccagtcggt cgtgctgagc ttcgggcaat ccagcatcga cggatcggaa ccctaccggt
      181 tcgtcggcct caggcactat gccacgttga tgggtgacgg gcggttctgg aacgcgcttg
      241 cggtcacctt cacctttacc gcactgtcca ttcccctgga actggcattg ggaatcggcc
      301 tggccttgct gatgaacgaa agtttcaggg gcaaggggct ggcgcggctg gcggtcctgt
      361 ttccctgggc actgccgacg gcgctgaatg cgctgatctg gcgctggatg tacaattccg
      421 attacgggct gttcaacgcg gtggcgctgc aaagcgggct tgcggaccgg ccgatcaact
      481 tcctgggcga tacctcgctg gcgatggcat cgatggtggt cgtggccgta tggaagacca
      541 gctctttcat ggcgctcatt attcttgcgg gcctgcaatc catcccccgc gacctgttcg
      601 aggcgggccg tatggacggc atgaccaaat ggcaggaatt cacccagatc accctgccac
      661 tgttgaaagg gcctatcctc gtggccctca tcatccggtc gatggacgcg ctgcgcacct
      721 tcgagctgcc cttcaacctg accgatggcg ggccggtgaa cgcgaccgaa agcctgtcgc
      781 tctacgccta caaggcgatc ttcgatttcc tggatttcaa ctttggcgcg gcagtcgtgg
      841 tggtgcagtt cctcgtgatc ttcgcgatga gcctgatcta cgtctttgcc cttcgaaaca
      901 aggattgagc cgatgcaaaa acgaccgcgc tatggccttt atgcaatcgt cgcgctttcg
      961 gtcttgatct cgttctttcc gatcgtctgg ctgatcctga catcgttcaa gaacaccgcc
     1021 ggaatctatg cctggccgcc gcaatactgg cccgatccct tcacattcga gaattacgtc
     1081 tcgatcttca ccaattcgcc ggaattgctg cgctatatcc tgaacagctt tatcgtcggg
     1141 gtcggcgcca cggcggtcac gctgttattg ggtgggatgg cggcctatgc gctgtcgcgg
     1201 ctgggcctgc gctttgcagg agtgctgatg gtcgccatcc tcgcggtgtc gatgtttccg
     1261 ccggtgtcgc tgctgccgtc gctgtttcag aacttcctga acttcgggct gttgaacacc
     1321 tataccggcc ttgtcctggc ccatgcgggc ctgttccttc ccttcaccgt ctggatgctg
     1381 gccagctact tcgccaccct gccggtggag atcgaagagg ccgcgcgcat ggatggcatg
     1441 ggcttcctgc ggatattcct gacaatcgtg ctgcccctgt cgtggccggg atttgtggcc
     1501 accgg
//
LOCUS       DTVW01000816            1052 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1997916, whole
            genome shotgun sequence.
ACCESSION   DTVW01000816 DTVW01000000
VERSION     DTVW01000816.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1052)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1052)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1052
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1997916"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..203)
                     /gene="lysK"
                     /locus_tag="EYO87_10740"
     CDS             complement(<1..203)
                     /gene="lysK"
                     /locus_tag="EYO87_10740"
                     /EC_number="6.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013068333.1"
                     /note="class I; LysRS1; catalyzes a two-step reaction,
                     first charging a lysine molecule by linking its carboxyl
                     group to the alpha-phosphate of ATP, followed by transfer
                     of the aminoacyl-adenylate to its tRNA; in Methanosarcina
                     barkeri this enzyme charges both tRNA molecules for lysine
                     that exist in this organism (but the tRNALysUUU very
                     poorly) and in the presence of LysRS2 can charge tRNAPyl
                     with lysine; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HIC66456.1"
                     /translation="MTTLRDAAMRSKAWPFEEARRVLKRYDKADPEKGFVLFETGYGP
                     SGLPHIGTFGEVARTTMIRRAFE"
     gene            293..715
                     /locus_tag="EYO87_10745"
     CDS             293..715
                     /locus_tag="EYO87_10745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010398374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydro-3-deoxyphosphooctonate aldolase"
                     /protein_id="HIC66457.1"
                     /translation="MTTDLPSLSPCDALVAVMVAVSASDAQMRTSELVAIQRMVDHAP
                     VFADYDEDRIRAASQTVMTLFEEEDGLDALFGLIRDALPEKLYETAYALACDVAAADG
                     RLYEGEIALLAEIRDQLNIARLHAAAIELSAQVRHRVI"
     gene            complement(737..>1052)
                     /locus_tag="EYO87_10750"
     CDS             complement(737..>1052)
                     /locus_tag="EYO87_10750"
                     /inference="COORDINATES: protein motif:HMM:PF02113.13"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="peptidase S13"
                     /protein_id="HIC66458.1"
                     /translation="AGPGLAAGLPELLKTDPLAEDLGLDPDRSAQVAAKTGTLNFVSN
                     LAGYVTGADGNRRCFAILSVDPARHEATSGQEQPAGVRAWTRDAKRLQRQMLQAWAGS
                     GG"
BASE COUNT          172 a          360 c          329 g          191 t
ORIGIN      
        1 atctcgaagg cgcggcggat catcgtggtg cgggcaacct caccgaaggt gccgatatgc
       61 ggcaggcccg aggggccgta gcccgtctcg aacagcacga aacccttttc gggatccgcc
      121 ttatcgtagc gtttcagcac ccggcgcgcc tcttcgaatg gccaggcctt cgaacgcatc
      181 gcggcatcgc gcagggtggt catcgctttt ctcccggttg caagcttcga cgccttattg
      241 aacgcgggcg caatcgtcaa taatttgcct gcgaaccgat ggagaaccga ccatgaccac
      301 cgacctgccc tcactttcgc cctgcgacgc gctggttgcg gtcatggtgg ccgtctcggc
      361 atcggatgcg cagatgcgaa cctcggaact tgtggcgatc cagcgcatgg tcgatcacgc
      421 cccggttttc gccgattacg acgaggatcg catccgcgcc gccagccaga cggtgatgac
      481 gctgttcgag gaagaggacg gcctggacgc gctgttcggg ctgatccgcg atgcgctgcc
      541 cgaaaagctg tatgaaaccg cctatgcgct ggcctgcgat gtggccgccg ccgatggcag
      601 gctttacgag ggcgagatcg cgctgctggc cgaaatccgc gaccagctca acatcgcgcg
      661 cctgcacgcc gccgcgatcg agctttcggc acaggttcgc caccgcgtga tctgaacccc
      721 ggttccgacc gcttcgtcag ccacctgaac cggcccaggc ctgcagcatt tgccgctgca
      781 agcgcttggc gtcgcgcgtc caggcacgga ccccggccgg ctgttcctgt ccgctggtcg
      841 cctcgtggcg cgccggatcg acggacagga tcgcgaaaca gcgtcggttt ccgtctgcgc
      901 cggtcacgta acccgcgagg ttcgagacga aattcagcgt tcccgtcttg gccgcgacct
      961 gtgcagatct gtccgggtcc aggcccagat cctcggccag cggatccgtc ttcagcagtt
     1021 cgggcagccc tgccgcgagc cccggaccgg cc
//
LOCUS       DTVW01000817            2089 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1998713, whole
            genome shotgun sequence.
ACCESSION   DTVW01000817 DTVW01000000
VERSION     DTVW01000817.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2089)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2089)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2089
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1998713"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1046)
                     /locus_tag="EYO87_10755"
     CDS             complement(<1..1046)
                     /locus_tag="EYO87_10755"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthase"
                     /protein_id="HIC66459.1"
                     /translation="MANVVVVGAQWGDEGKGKIVDWLSERADVIARFQGGHNAGHTLV
                     IGETVFKLSLLPSGIVREGKLAVIGNGVVLDPWALFAEIDRLAAQGVRIDTDSLIIAE
                     NTPLILPLHQDLDQLREEAAGKAKIGTTGRGIGPAYEDKVGRRTIRVADLGDDETLEA
                     RLDRLLAHHDALRQGLGAEPIDRAGLKAKLLEIAPKLLPYAGPVWKVMAEARKSGKRI
                     LFEGAQGSLLDIDFGTYPYVTSSTTVSGMAASGTGMGPGAIDFVLGIVKAYTTRVGEG
                     PFPTELHDSDGQRLGERGREFGTVTGRKRRCGWFDAVLVRQTCAISGMNGIALTKLDV
                     LDGFETLRICTGYE"
     gene            1184..1996
                     /locus_tag="EYO87_10760"
                     /pseudo
     CDS             1184..1996
                     /locus_tag="EYO87_10760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003508279.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cyclase family protein"
BASE COUNT          330 a          717 c          674 g          368 t
ORIGIN      
        1 atttcgtagc ctgtgcagat cctcagcgtc tcgaacccgt ccagcacgtc cagcttggtc
       61 agcgcgatgc cgttcatgcc gctgatcgcg caggtctggc gcaccagtac cgcgtcgaac
      121 cagccgcagc gccgcttgcg cccggtgacg gtaccgaatt cgcggccccg ctcgcccagc
      181 cgctgaccgt cggaatcgtg caactcggtc gggaacgggc cctcgccgac ccgcgtcgta
      241 taggccttga cgatgcccag gacgaaatcg atcgcgcccg gccccatccc ggtgcccgag
      301 gccgccatgc ccgaaacggt ggtggaactg gtcacatagg gataggtacc gaaatcgatg
      361 tccagaagcg aaccctgcgc gccctcgaac aggatccgct tgccggattt gcgcgcctcg
      421 gccatgacct tccagaccgg accggcatag ggcagcagct tgggggcgat ttccagcagc
      481 ttggccttca acccggcccg gtcgatcggc tcggcgccca ggccctgtcg cagcgcgtcg
      541 tgatgggcca gaagcctgtc cagccgcgcc tccagcgttt cgtcgtctcc cagatcggcg
      601 acccggatgg tgcggcggcc caccttgtcc tcgtaggccg ggccgatccc gcggccggtg
      661 gtcccgatct tcgccttgcc ggccgcctcc tcgcgcaact ggtccagatc ctggtgcagc
      721 ggcaggatca gcggcgtgtt ctcggcgatg atcaggctgt cggtgtcgat gcggacgccc
      781 tgcgcggcca gcctgtcgat ctcggcaaac agcgcccagg gatccagcac gacgccgttg
      841 ccgatgaccg ccagctttcc ctcgcggacg atgcccgagg gcagaagtga cagcttgaac
      901 accgtctcgc cgatgaccag ggtgtgtccg gcattgtggc cgccctgaaa gcgcgcgatc
      961 acgtcggccc gttcggacag ccagtcgacg atcttgccct tgccctcgtc gccccattgc
     1021 gcgccgacaa ccaccacatt ggccatgagc cggtccttcc cttgcccgaa aatcaccgcc
     1081 gcagggtcta gcgcatggcc gtgccgggga aaagcggcga tttcctttgg cgcgggggcg
     1141 gcaccgtgga ataatacgcg caaccatcag ggagacccgc gccatgtgtc acgcctgtat
     1201 cgtcgaatcg gtcaagtcga acatgctgtc ccgccgctcg ctgttttcgg gcgcgaccgc
     1261 gggggcggcg gcccttgcca tgggtgccgc ggcggcccga ccggccctgg cccagtcatc
     1321 gggcaaggtc gtcgatctga cccatccctg ggacggcgat tttccgacct tcgacggcta
     1381 gcccggaatt ctctacgagc ccgacaagat ccttgatcgc gacggctatc agttgtggaa
     1441 gctgacgatt ttcgaacatt ccggcaccca tgtcgacgcg ccgctgcatt tctcggccga
     1501 tggcgcctcg gtcgatcagt tgccggccgc cggccttgtc tgtccgctct gcgtgctgga
     1561 cctgagggcg aaggcgtccg aggatgccaa tgccatggtc cagtccgagg atatcgaggc
     1621 atggatatcc gccaatggcg agatcccggc cggcgctgtg gtggccatgc attcgggctg
     1681 ggccgcaaaa ctggccgaga ccgcctatcg caccgacagc gacggaaatt tcgcctttcc
     1741 cggcttttcg aaggccgcca cggacatgct ggcggggatg gacgtggccg ggatcggagt
     1801 cgatacgctg tcgctggatc ccggcaattc ggccgatttc gcggttcaca attcgtggct
     1861 gccgggcggc cgctacggga tcgagaacct tgcggggctg gaccagatgc cggccgccgg
     1921 cgccacgatc ttcgtcggcg cgcccagcca caagcgtggc accgggggac ctgcgcgcat
     1981 catcgcagtg gtctgaaggg cctcgccctc ggcgcgtgcc gcgccttacc cccgggtatt
     2041 tgcgcaacga agaaagcgcc ggatcagtaa tgcggtggtc gctggtcgg
//
LOCUS       DTVW01000818            1238 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1998792, whole
            genome shotgun sequence.
ACCESSION   DTVW01000818 DTVW01000000
VERSION     DTVW01000818.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1238)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1238)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1238
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1998792"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1238)
                     /locus_tag="EYO87_10765"
     CDS             complement(<1..>1238)
                     /locus_tag="EYO87_10765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011751040.1"
                     /note="activates fatty acids by binding to coenzyme A;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="acyl-CoA synthetase"
                     /protein_id="HIC66460.1"
                     /translation="RVPQDVALVMGDAQWTWAQFEARTDALALALQDMGLDKGDRVLC
                     QSQNCMEMMQAMFAVWRAGGVWVPANYRQTPEELVYLTESSGARFMICNARFPDHAAA
                     CAGAAPDLRLLAFGDADFGPSVSALTEAHLGRHPQVAAVDRDDPCWFFFTSGTTGRPK
                     ASVLTHGQMAFVVTSHLADLMPGLTPEDASLVVAPLSHGAGVHQLTQVARAVKTVLMP
                     SDKFDVATAWKLVEVWRVSTIFTVPTILKMLVEDESLDHFDHTSLRYVIYAGAPMYRE
                     DQKRALAALGPVLVQYFGLGEVTGNITVLPTWLHSADDDAREGTCGFPRTGIEVQVQD
                     DQGRALPPFETGELCVIGPAVFAGYFDNADANAKSFRDGWFRTGDLGHMDAQGFVYIT
                     GRASDMYISGGSNVYPREIE"
BASE COUNT          223 a          438 c          388 g          189 t
ORIGIN      
        1 ctcgatctcg cgcggataga cgttcgagcc acccgagata tacatgtccg acgcccgccc
       61 ggtgatatag acgaagccct gcgcatccat gtggcccaga tcgccggtgc ggaaccagcc
      121 gtcgcgaaag gatttggcat tcgcatctgc gttgtcgaaa tagcccgcga agaccgccgg
      181 gccgatcacg cacaactcgc ccgtctcgaa gggcggcagc gcgcggccct gatcgtcctg
      241 cacctgcacc tcgatgccgg tccggggaaa gccgcaggtg ccttcgcggg catcgtcatc
      301 cgcgctgtgc agccatgtgg gcaggacggt gatgttgccc gtcacctcgc ccagcccgaa
      361 atactgcacc aggaccggcc caagcgcggc caaggcgcgt ttctgatcct cgcgatacat
      421 cggtgcgccg gcatagatga cgtagcgcag cgaggtatga tcgaaatggt ccaggctttc
      481 atcctcgacc agcatcttca ggatcgtcgg caccgtgaag atggtcgaga cgcgccagac
      541 ctcgaccagt ttccaggccg tcgccacgtc gaacttgtcc gatggcatca gcaccgtctt
      601 caccgcgcgg gccacctggg tcagttgatg caccccggcg ccgtgcgaca gcggcgccac
      661 gaccagcgag gcatcctcgg gcgtcagccc cggcatcagg tcggccagat ggctggtgac
      721 gacaaaggcc atctgcccat gggtcagcac cgatgccttg ggccgcccgg tcgtgccgga
      781 ggtgaagaag aaccagcagg gatcgtcgcg atccaccgcc gccacctgcg gatgccggcc
      841 cagatgcgcc tcggtcagcg cgcttacgga ggggccgaaa tcggcatccc cgaaagccag
      901 caggcgcagg tccggcgcgg ccccggcgca ggccgccgcg tgatcgggga aacgcgcatt
      961 gcagatcatg aaccgcgcgc ccgagctttc ggtcagatag accagttcct cgggcgtctg
     1021 gcggtaattc gcgggcaccc agacgccgcc cgcgcgccag acggcgaaca tggcctgcat
     1081 catctccatg cagttctgcg actggcacag cacccggtcg cccttgtcca ggcccatgtc
     1141 ctgcaaggcc agggccagcg catcggtccg cgcctcgaac tgggcccagg tccattgcgc
     1201 atcgcccatg accagcgcca cgtcctgcgg cacccgcc
//
LOCUS       DTVW01000819            1086 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_1999260, whole
            genome shotgun sequence.
ACCESSION   DTVW01000819 DTVW01000000
VERSION     DTVW01000819.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1086)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1086)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1086
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_1999260"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1086)
                     /locus_tag="EYO87_10770"
     CDS             complement(<1..>1086)
                     /locus_tag="EYO87_10770"
                     /inference="COORDINATES: protein motif:HMM:PF02518.24"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="HAMP domain-containing histidine kinase"
                     /protein_id="HIC66461.1"
                     /translation="DVRSSAESLARIASTGDRTDLDEEIRAQVRSSRNGASLFAFVDA
                     ASGQTTGSLRLSAPFEGARRLLVGRDIPAGAPKQADSAEAYLAFGIRTEPGWVIAARD
                     EAWVSENGEILVQTTASSLALAMVLSIGLALIIARRNERRIDRMDRVLDEVGAGRMHR
                     RIGDGGNDDIADLAARVDQMLDRLETGVEAIRQVSTDVAHDLRAPLARLRMRLEPQAL
                     SGTLPADARRDIGSALMDIDAISATFDAILRLARLQSGTVGRRHDPVDLVRLAASIGE
                     ILQPSAEEAGHTLDIDLPAAPVRVPGDEDLLAQALTNLVVNAVEHCPPPASVRIEVGL
                     RANRPVLTVSDNGPGIPEADRGPVLER"
BASE COUNT          169 a          373 c          380 g          164 t
ORIGIN      
        1 aaccgttcca ggaccggccc gcgatcggcc tcggggatgc cggggccatt gtcggaaacg
       61 gtcagcacgg gccggtttgc ccgcagaccg acctcgattc tcaccgaggc cggcggcggg
      121 caatgttcga ccgcgttcac caccagattg gtcagcgcct gggccagcag atcctcgtcg
      181 cccgggacgc ggacgggcgc ggccggaagg tcgatgtcga gtgtatggcc ggcctcttcg
      241 gccgatggct gcaggatttc gccgatcgag gcagccagcc gcaccagatc gacgggatcg
      301 tgacgccgcc ccacggtgcc cgactgcaat cgtgcaagac gcaggatcgc gtcgaacgtc
      361 gccgagatgg cgtcgatgtc catcagggcc gagccgatat cgcgccgggc atccgccggc
      421 agcgtgccgg aaagggcctg tggttccagc cgcatcctca gccgcgccag gggcgcgcgc
      481 agatcatggg caacatcggt cgacacctgc cggatggcct cgaccccggt ttcgagccgg
      541 tcgagcatct gatccacgcg ggcggcgagg tcggcgatgt cgtcgttgcc gccgtcgccg
      601 atccgccgat gcatgcgccc ggcgccgact tcgtcgagaa cccggtccat gcggtcgatg
      661 cggcgttcgt tcctgcgcgc gatgatcagc gcaagcccga tggacaacac catcgcaaga
      721 gccagcgacg atgccgtcgt ctgcaccagg atctcgccat tctcgctgac ccaggcctcg
      781 tcgcgtgcgg cgatgaccca gccgggttcg gtccggatcc cgaaggcaag ataggcctcg
      841 gcgctgtcgg cctgcttggg cgcgcctgcc gggatgtcgc ggccgacaag cagacggcgc
      901 gcgccctcga agggggccga cagccgcagc gagccggtgg tctgccccga ggcggcatcg
      961 acaaaggcga acaggctggc gccgttcctg ctggagcgga cctgggcgcg gatttcctcg
     1021 tcaagatcgg tccggtcgcc ggtggacgcg atccgcgcca ggctttctgc gctggatcgc
     1081 acatcg
//
LOCUS       DTVW01000820            1841 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2000836, whole
            genome shotgun sequence.
ACCESSION   DTVW01000820 DTVW01000000
VERSION     DTVW01000820.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1841)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1841)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1841
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2000836"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..174)
                     /locus_tag="EYO87_10775"
     CDS             complement(<1..174)
                     /locus_tag="EYO87_10775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HIC66462.1"
                     /translation="MIVYLVRRLGQSLLAVMAMAVLVFIGVYFIGNPVDVLINPEASQ
                     ADILATTERLGLDK"
     gene            complement(248..1744)
                     /locus_tag="EYO87_10780"
     CDS             complement(248..1744)
                     /locus_tag="EYO87_10780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006228055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HIC66463.1"
                     /translation="MDPQFHQLSTNIQVTKNIFEALTTQDAVQKVTPGLAESWEAVDD
                     TTWRFKLRQGVKFHDGSDFTARDVIYSFCRVPLVQNSPSAYTIYTAGIADMQAEDDYT
                     LTIRTKATNPLLPSEMWSLAIVSANALGAEDQVTYGPDGTCEGMGDVPQAPAFNDPGI
                     AVGTGPYVLDNYTRGSEMVVTRFDDYWGGTPDWERVVMRPITSDGPRVAALLAGDVDM
                     IESPPIQDIPRIEQAGFSVVDALSNRIIYLHMLQQEDAPGISGAEGNPLLDPRVREAI
                     SLSINREAIAERIMGGYAQPAGELLPPPMFGTSGRPVDAYDPERARELLAEAGYPDGF
                     SITLGTPNDRYINDEQVAQAVAQMMSRIGIQTRVDASTASQFFSRRNALEFPIYMAGW
                     GASSGDMSSPLKSLVATYDPETGMGPTNAGRYSNPDMDALLIEAMSTIDDEKRDQMLQ
                     EAETMVLDDYGIIPLHYEQTVWAMKSDLSYEPRVDQYTMATEVKPAAK"
BASE COUNT          302 a          562 c          627 g          350 t
ORIGIN      
        1 cttgtccagg cccagacgtt cggtcgtggc caggatgtcg gcctggctgg cctcggggtt
       61 gatcagcaca tcgacgggat tgccgatgaa atagacgccg atgaagacca gcaccgccat
      121 tgccatcacg gcaagcaggc tctggccaag gcggcggaca agatagacga tcatggcttg
      181 gatccctggt gggccggcaa tcggcaacgg caccggcacc ccacgtcagg ggggccggcg
      241 gttcggatca cttggcggcg ggcttgacct cggtggccat ggtatattga tccacgcggg
      301 gttcgtagga caggtccgac ttcatcgccc agacggtctg ttcgtagtgc agcgggatga
      361 ttccgtaatc gtccagcacc atggtttccg cctcttgcag catctggtcg cgtttctcgt
      421 cgtcgatggt cgacatcgcc tcgatcagca gggcgtccat gtccgggttg gaatagcgcc
      481 cggcattggt cggtcccatg cccgtttcgg ggtcataggt cgccaccagc gatttcagcg
      541 gcgaggacat gtcgcccgag gacgcgcccc agccggccat gtagatcggg aattccagcg
      601 cgttgcggcg cgagaagaac tgactggcgg tgctggcatc gacgcgggtc tggatgccga
      661 tgcgggacat catctgggcg accgcctggg ccacctgttc gtcgttgata tagcggtcgt
      721 tcggcgtgcc gagcgtgatc gagaagccgt cgggatagcc ggcctcggcc agcagctccc
      781 tggcgcgttc ggggtcatag gcatcgaccg gacggcccga ggtgccgaac atcggcggcg
      841 gcagcaattc gccggcgggc tgggcatagc cgcccatgat ccgttccgcg atggcttcgc
      901 ggttgatgga cagggaaatc gcctcgcgga cgcggggatc cagcagcggg ttgccctcgg
      961 cgccgctgat gccgggtgca tcttcctgct gcagcatgtg cagatagatg atccggttgg
     1021 acaaggcatc gacgaccgag aagcccgcct gctcgatccg ggggatgtcc tggatcgggg
     1081 gcgattcgat catgtccacg tcaccggcca gcagcgcggc cacgcgcggc ccgtcgcttg
     1141 tgatcggccg catcacgacc cgttcccaat cgggcgtgcc gccccagtaa tcgtcgaacc
     1201 gcgtcacgac catttccgag ccgcgggtat aattgtccag cacgtagggc ccggtgccga
     1261 cggcgatccc gggatcgttg aaggccggcg cctggggcac atcgcccatc ccctcgcagg
     1321 tgccgtcggg tccataggtc acctggtctt cggcgcccag ggcgttggcc gacacgatcg
     1381 ccagactcca catttcgctg ggcagaagcg ggttggtggc cttggtcctg atggtcagcg
     1441 tataatcgtc ttcggcctgc atgtcggcga tgccggcagt atagatcgtg taggccgatg
     1501 gcgaattctg caccagcggc acccggcaga aggaatagat cacgtcgcgg gcggtaaagt
     1561 cgctgccgtc gtggaacttg accccctggc gcagcttgaa ccgccaggtg gtgtcgtcta
     1621 ccgcctccca gctttcggcc aggccggggg tgaccttctg caccgcatcc tgggtggtca
     1681 acgcctcgaa gatgttcttt gtgacctgga tattggtcga caattgatgg aattgcgggt
     1741 ccatcgaggt cgcctcggac ttgaggccga tggtcagttc ctgggccgtg gcgggcgcga
     1801 ttccggcgac ggcaatgccg gccagcaatg gcagggtcag c
//
LOCUS       DTVW01000821            1193 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2001261, whole
            genome shotgun sequence.
ACCESSION   DTVW01000821 DTVW01000000
VERSION     DTVW01000821.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1193)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1193)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1193
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2001261"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1193)
                     /gene="glmS"
                     /locus_tag="EYO87_10785"
     CDS             complement(<1..>1193)
                     /gene="glmS"
                     /locus_tag="EYO87_10785"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010392968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HIC66464.1"
                     /translation="VHNGIIENFRDLREELATNGLRPESQTDTETVALLTGHHLDRGL
                     SPLEAARATLSRLHGAFALAFLFEGEGDLMIAARRGSPLAIGHGTGEMFLGSDAVALS
                     PFTDRITYLEDGDHAVLTRAGVQVYEAGGRPVGRGESRIDVGATAIDKGGYRHFMAKE
                     IAQQPVVIGDVLNHYVKDNRIVLPEGLDFTGVDRIALVGCGTAHLAGHVAKYWFERLA
                     GLPCDIDVASEFRYREPPLSDKSWFIAISQSGETADTLAALHYAKDRVARTVGLVNVG
                     TSAIARDSDVALPTLAGIEVSVASSKAFTCQLTVLAILALKAARDRGRIDDVQLAGHL
                     ADLRAVPGLLQQALNLSDDCRALSEWLGQAQDVLYLGRGALYPVALEGALKLKELSYI
                     HAEGY"
BASE COUNT          207 a          429 c          371 g          186 t
ORIGIN      
        1 atagccttcg gcgtgaatat agctgagttc cttcagcttc agcgcacctt ccagcgccac
       61 cggatacagc gccccgcgcc ccagatacag cacgtcctgc gcctgaccca gccattccga
      121 cagcgcccgg caatcatcgg acaggttcag cgcctgctgc aacaggcccg gcacggcgcg
      181 cagatcggcc agatggcccg caagctgcac atcgtcgatc cggccgcgat cacgggccgc
      241 cttcagcgcc aggatcgcca gcaccgtcaa ctggcaggtg aacgccttgg aggacgccac
      301 gctgacctcg atccccgcca gcgtcggcag cgccacgtcg ctgtcgcgcg caatggccga
      361 ggtgcccaca ttcaccagac cgacggttcg ggccacccgg tccttggcat aatgcagggc
      421 agccagcgtg tccgccgtct cgcccgactg gctgatggcg atgaaccagc tcttgtccga
      481 cagcggcggc tcgcgatagc ggaattccga ggccacgtcg atatcgcagg gcaggcccgc
      541 cagccgctcg aaccagtatt tcgcgacatg gcccgccaga tgcgcggtgc cgcaaccgac
      601 cagcgcgatg cggtccacgc ccgtgaaatc cagcccctcg ggaagcacga tccggttgtc
      661 cttgacgtaa tggttcagca cgtcgccgat caccaccggc tgctgagcga tttccttggc
      721 catgaaatgc cggtagccgc ccttgtcgat cgccgtcgcg ccgacgtcga tccggctttc
      781 gccgcggccg accggacgcc ccccggcctc atagacctgc acgcccgcgc gggtcaggac
      841 ggcgtggtcg ccatcctcca gataggtgat gcggtcggta aagggcgaca gggccaccgc
      901 atccgaaccc agaaacatct cgcccgtgcc atggccgatg gccagcgggc tgccccggcg
      961 tgccgcgatc atcagatcgc cctcgccctc gaacaggaag gccagcgcga aggcgccgtg
     1021 caggcgggac agggtggcgc gcgcggcctc cagcggtgac aggccccgat ccagatgatg
     1081 gccggtcagc agggccaccg tctcggtatc ggtttggctt tcgggcctga ggccgttcgt
     1141 ggccagttcc tcgcgcaggt cgcggaaatt ttcgatgatg ccgttatgaa cca
//
LOCUS       DTVW01000822            1147 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2006776, whole
            genome shotgun sequence.
ACCESSION   DTVW01000822 DTVW01000000
VERSION     DTVW01000822.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1147)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1147)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1147
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2006776"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..878
                     /locus_tag="EYO87_10790"
     CDS             <1..878
                     /locus_tag="EYO87_10790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012083505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="peptidase M24"
                     /protein_id="HIC66465.1"
                     /translation="YQRNKTKNAIARIAKKRKSYSQQKTKIEKLIARLGEDEEKYQSK
                     LQNLVDKQASLRSTLAKLNILRGKEVEEARKRAKARKEAIRLEKERKRKIRQEKALAR
                     EKARKARAAIKLAKTKEAKKAARLAVKKADKEVKRVQNKKFKPSEKVRKVHSSYKKSK
                     TYAYKGEKTISPLPGCKLIKKFGTYIDPIYKIKIFNESVTLKAPSSDAKVKNVLNGKV
                     VFAGKSSMLGKVVVVAHSGKIHTVYAGLSKIAPTIHVGSKIKKGYTVGKVSRKLMFQA
                     TKNSKHINPMKLIRI"
BASE COUNT          453 a          187 c          213 g          294 t
ORIGIN      
        1 agtaccaacg caataaaacg aagaatgcca tagcacgtat tgctaaaaaa agaaaatctt
       61 atagtcaaca aaagacaaaa atagagaaac ttatagctcg tcttggagag gatgaagaga
      121 agtatcagtc taagttgcaa aaccttgtag acaagcaagc ttctttacga agtactttgg
      181 caaaactcaa catacttcgg ggaaaagaag tggaagaagc acgtaaacgt gcaaaagcac
      241 gaaaagaagc catacgtcta gaaaaagaac gcaaaagaaa gatacgacaa gaaaaagcat
      301 tagcacgtga aaaagcaaga aaagcaagag ccgccataaa actagctaaa actaaagagg
      361 ctaaaaaagc agcgagactt gcagtaaaaa aagcagacaa agaagtaaaa agagtacaaa
      421 ataaaaagtt caaaccaagt gagaaagtaa gaaaagtaca ctcttcatat aagaagtcta
      481 aaacctatgc atataagggt gaaaaaacta tatctccgct acctggatgt aagctcatta
      541 agaagtttgg tacctacata gaccctatct ataagataaa gatatttaat gagtccgtta
      601 ctcttaaagc gccatcatca gatgctaaag taaaaaatgt acttaatggt aaagtggtgt
      661 ttgcaggtaa aagtagtatg ttaggtaaag ttgtagttgt agcccatagc ggaaagatac
      721 acaccgtcta cgcaggactt tctaaaattg cccctaccat acatgtaggc tctaagataa
      781 aaaagggcta tactgttgga aaagtatcac gtaaactgat gtttcaagcg actaaaaatt
      841 cgaagcacat taaccctatg aagttgatac ggatttagta ttgatgattg agatatacaa
      901 cactcatatc aaaaaactgt ttacacctca agacatattt tcaaacaacg aatggatgct
      961 taagcatcaa atatttatga tgcttatagt ctctttttct ttaggcatag gtctttttct
     1021 ttttgctatt tatcgtgtga cacatgacaa tgttttggta ggggtaggac aatttatgtt
     1081 tgcctttttt ctcttatatg gttttatcaa atcacgtcac gataagacat tttataaacg
     1141 ttatact
//
LOCUS       DTVW01000823            1088 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2009872, whole
            genome shotgun sequence.
ACCESSION   DTVW01000823 DTVW01000000
VERSION     DTVW01000823.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1088)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1088)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1088
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2009872"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            314..>1088
                     /locus_tag="EYO87_10795"
     CDS             314..>1088
                     /locus_tag="EYO87_10795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015933610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetylmuramidase"
                     /protein_id="HIC66466.1"
                     /translation="MARENFAACMAEIFAHEGGYVDHPKDPGGATNMGITIGTLREWR
                     GGPVTKDDVRSLTKREAETIYRARYWNPVRGDDLRAGVDLVALDPAVNSGVRRGVQWL
                     QRAVGVTADGKMGPLTLKAANDATPVDAIKRACAVRMGFLRGLRTWDTFGRGWSRRVA
                     RVEAVAVRMAVEASTLPARPTLIAEKAEAEAKARREGTNAGGVAVGGGAGTTLADLPD
                     WTVLVLAAVVVLAVINLLGRRRHEQERAAAFQAVAEEARA"
BASE COUNT          176 a          363 c          404 g          145 t
ORIGIN      
        1 aggcggtctg gccgctgctt ctggggctcg ccggtctctg ggcaagaatt gaagtggcgc
       61 tctccaagtc ccgagatcag agcaaggcga atgaacgcga gatcgccaag ctcgaggtga
      121 aggtggaggc gcaggccgcg tccgccgcgc agcaagccgt ccagctgggg cgcatcgagg
      181 aaagtctgct gggaataggc aggaccctcg agcgcctcga tcggaagttt cccgaccgct
      241 aagccgcaca ccctctgaaa cccgaccgga cccgccgcga ggcgggtttt ttcatgcctg
      301 aaaggagccc gcgatggccc gagagaactt cgccgcctgc atggcggaaa tcttcgccca
      361 cgagggcggc tacgtcgatc acccgaagga cccgggcggc gccacgaaca tgggcatcac
      421 catcggcacc ctgcgcgagt ggcggggcgg tccggtgacc aaggacgacg tccgcagcct
      481 gaccaagcgc gaggcggaaa ccatctaccg cgcccgctac tggaacccgg tgcgcggcga
      541 cgatctccgc gccggtgtcg accttgtcgc gctcgatccc gccgtgaaca gcggagtcag
      601 gcgcggcgtc caatggctgc agcgcgcggt gggcgtcacg gccgacggga agatgggccc
      661 cttgactctc aaggcggcga acgacgccac gccggtcgac gccatcaagc gcgcctgcgc
      721 ggtccgcatg ggcttcctgc gcggtctccg cacctgggac acgttcgggc gcggctggtc
      781 gcgccgggtg gcccgcgtcg aggctgtggc tgtccgcatg gcggtcgagg ccagcacgct
      841 gcccgctcgc ccaacgctga tcgccgagaa ggccgaggcc gaggccaagg cgcgccgcga
      901 gggcacgaac gccggtggcg tggcggtggg cggcggcgcg ggcaccacgc tcgcggacct
      961 gcccgactgg acggtcctcg ttctggcagc ggtcgtggtc ttggcggtga tcaacctgct
     1021 cgggcgccga cggcatgagc aggagcgggc ggcggcgttc caggcggtgg cggaggaggc
     1081 acgggcat
//
LOCUS       DTVW01000824            1844 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2010847, whole
            genome shotgun sequence.
ACCESSION   DTVW01000824 DTVW01000000
VERSION     DTVW01000824.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1844)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1844)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1844
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2010847"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..282
                     /locus_tag="EYO87_10800"
     CDS             <1..282
                     /locus_tag="EYO87_10800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009176005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HIC66467.1"
                     /translation="HAAFDLMVMVGFGILGFVLRKLDFSLVPVVLGLLLGMDMENNLR
                     RALSISGGDFLILLQSPIALAIYALTAAFLALSLWLSRRRMMPIPETED"
     gene            complement(279..1064)
                     /locus_tag="EYO87_10805"
     CDS             complement(279..1064)
                     /locus_tag="EYO87_10805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010397054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FCD domain-containing protein"
                     /protein_id="HIC66468.1"
                     /translation="MSDPSIKPERAADSVARHLETLILEGSLRPGEALLPERDLALAL
                     EVSRPTLREALKMLADRGLLEPVRGRGIRVASLGREAIADPLMALLEARPDVADDYLE
                     FRGIVESQAAAMAAERANRVDLDLIRACLDRIDAAHAGGDPDDEAAADAALHQNICEA
                     SHNLVLLQIMRALSGNLRSDVTKNRARLFALPAIRDLLRDQHRAIAQAILDRDPARAR
                     NAAQTHLDYVREAVLGIEAAEARLDLSLRRSRSGGLGRGPGGA"
     gene            1194..>1844
                     /locus_tag="EYO87_10810"
     CDS             1194..>1844
                     /locus_tag="EYO87_10810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002824159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HIC66469.1"
                     /translation="MSTILMPPPDPAVIARKSQIVAALRGALPDDAVIADLEETRAYE
                     CDALTAYRCAPLAVVLPRSTDEVAAAMRVCHRLGVPVVPRGAGTSLAGGALPTADCVV
                     IGTMRLNAFLDIDTENRFIRVQSGVTNLSVSAELEPEGFFYAPDPSSQLACTIAGNIA
                     MNSGGAHCLKYGVTTNNLMGATVVLSTGEIVELGGPESGPAGLDLLGLFCGSEGQLG"
BASE COUNT          277 a          627 c          628 g          312 t
ORIGIN      
        1 catgcggcgt tcgacctgat ggtgatggtc ggcttcggaa ttctgggctt cgtgttgcgc
       61 aagctggatt tctcgctggt gccggtggtt ctgggcctgc tgctgggcat ggacatggaa
      121 aacaacctgc gccgggcgct gtccatctcg ggcggggatt tcctgatcct gctgcaaagc
      181 ccgatcgcgc tggcgatcta tgcgctgacg gcggcctttc tggccctgtc gctgtggctg
      241 tcgcggcgcc ggatgatgcc gatccccgaa accgaggatt aggcgccgcc ggggccccgg
      301 cccagcccgc cgctgcgcga gcgtcgcagc gacaggtcaa gccgggcctc ggccgcctcg
      361 atgccaagca cggcctcgcg cacgtaatcc agatgcgtct gcgcggcgtt tcgcgcgcgt
      421 gccgggtcgc gatccagaat cgcctgcgcg atggcccggt gctggtcgcg cagcaaatcg
      481 cggatcgcgg gcagggcgaa caggcgcgcg cggttctttg tcacgtcgct gcgcagattg
      541 cccgacagcg cccgcatgat ctgcaacagg accaggttgt ggctggcctc gcagatgttc
      601 tgatgcaggg ccgcatcggc cgctgcctcg tcgtcgggat cgccacccgc atgggccgcg
      661 tcgatccggt ccagacaggc gcggatcagg tccagatcga cccggttcgc ccgttccgcc
      721 gccatcgccg ccgcctggct ttcgacgatg ccgcgaaatt cgaggtagtc gtcggccacg
      781 tcgggccgcg cctccagcaa ggccatcagc ggatccgcga tcgcctcgcg acccagcgac
      841 gccacgcgga tcccgcggcc cctgacaggc tccagcagcc cgcgatccgc cagcatcttc
      901 aaggcctcgc gcagggtcgg ccgcgacacc tccagcgcca gggccagatc gcgttcgggc
      961 agcagcgcct ctccggggcg cagcgaacct tcgaggatca gcgtttccag atgccgcgcg
     1021 acagaatcgg cggcgcgttc gggcttgatg ctgggatcgg acatcgggac tcgcatgatg
     1081 ggccgggctg gggcatcctt tgacgaaacg ctctgcgctg caaccggaag accggcacat
     1141 tgacagcgat ggtcaattta atttaccaag attgaccgaa gggaggaagg cccatgtcca
     1201 cgatcctgat gccaccgccc gatccggcgg tgatcgcccg caagtcccag atcgttgcgg
     1261 ccctgcgcgg cgccctgccg gacgacgccg tgatcgccga cctcgaagag acgcgggcct
     1321 atgaatgcga cgcgctgacc gcctatcgct gcgcgccgct ggcggtggtt ctgccgcggt
     1381 ccaccgacga ggtggcggcg gcaatgcgcg tctgccatcg cctgggggtg ccggtcgtgc
     1441 cacgcggggc gggcacctcg ctggccgggg gggcgctgcc cacggccgat tgcgtcgtga
     1501 tcgggacgat gcggctgaat gcctttctgg acatcgacac cgagaaccgc ttcatccgcg
     1561 tgcaatccgg cgtcaccaac ctgtcggtca gcgccgagct tgaacccgag ggcttcttct
     1621 acgcgccgga cccgtcatcg cagctggcct gcaccatcgc gggcaacatc gcgatgaatt
     1681 ccggcggcgc gcattgcctg aaatacgggg tcaccaccaa caacctgatg ggcgcgacgg
     1741 tggtcctttc gaccggcgag atcgtggaac tgggcggccc cgaatccggg cctgccgggc
     1801 tggaccttct gggcctgttc tgcggctcgg aaggtcagct gggc
//
LOCUS       DTVW01000825            1066 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2011525, whole
            genome shotgun sequence.
ACCESSION   DTVW01000825 DTVW01000000
VERSION     DTVW01000825.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1066)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1066)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1066
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2011525"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(301..>1066)
                     /locus_tag="EYO87_10815"
     CDS             complement(301..>1066)
                     /locus_tag="EYO87_10815"
                     /inference="COORDINATES: protein motif:HMM:PF03241.11"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-monooxygenase,
                     oxygenase component"
                     /protein_id="HIC66470.1"
                     /translation="ASPEDHPLASRFDETDAMLVLDKVFVPWERVFAYRDTEACNSLS
                     ARVGHGAHLYDQVSQRYIAKAEFMVGLALTICDSMKIEGFSHIANWLADMMSQLELLK
                     AAHKAALAGAGPNKYGVWQADMAPFTAIRRLFPDMIADMAEKVAQMAAGGLVTAPSTA
                     DLDSPIGDDVRLYMQSAGADAETRVRLMRLAFDATLSGFSGRQLLYERYFGGDPVRNA
                     HRHVAGYDKQPLMDKVLSFLERCAAEETDFKKHAAE"
BASE COUNT          227 a          314 c          330 g          195 t
ORIGIN      
        1 aaggccccac cagggtatat tcaaaaccac cctcggatga acaagttctg gaacattgaa
       61 ggacctgtag acgaatacgc ggctttttcc tgcggcgggc gcgggcaggt tcggcttggc
      121 tttgtgatag ggcagaccaa cggagcatcc cgaaagaacg atacccaaaa acaaaatcgc
      181 cgtagccttt aataagcggt ccattgctat ctccattttc cgccagacag tataccgtga
      241 tcgaacggaa tgttggaaga agtagaggcc actagacggg caataatcaa ggccgcgcgc
      301 ctattcggcg gcgtgttttt tgaaatcggt ttcctcggcg gcgcagcgct cgagaaagga
      361 cagcaccttg tccatcaacg gctgcttgtc atagccggcc acgtggcggt gggcgttgcg
      421 caccggatcg ccgccgaaat accgctcgta cagcagttgc cggccggaaa aaccggacag
      481 ggtcgcatcg aaggccaggc gcatcaggcg cacccgggtc tcggcatcgg cgcccgccga
      541 ctgcatataa agacgcacat cgtcgccgat cgggctgtcc agatcggcgg tcgacggcgc
      601 cgtcaccaga ccgccggccg ccatttgcgc cactttttcg gccatatcgg cgatcatgtc
      661 cgggaacagg cggcggatcg cggtgaacgg cgccatatcg gcctgccaga ccccgtattt
      721 gttgggaccg gcgccagcca gggcggcttt gtgggcggct ttcagaagct cgagctggct
      781 catcatatcg gccagccaat tggcgatatg gctgaagcct tcgatcttca tggagtcgca
      841 aatggtcagg gccagcccga ccatgaattc ggccttggcg atatagcgct gcgacacctg
      901 atcataaaga tgggcgccat ggccgacgcg cgccgacagg ctgttgcagg cctcggtatc
      961 gcggtaggcg aagacccgct cccagggcac gaagacttta tcgagcacca gcatggcgtc
     1021 ggtctcgtcg aagcgcgagg ccagcggatg atcttcgggc gaggcg
//
LOCUS       DTVW01000826            2617 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2013550, whole
            genome shotgun sequence.
ACCESSION   DTVW01000826 DTVW01000000
VERSION     DTVW01000826.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2617)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2617)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2617
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2013550"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..524
                     /gene="hisG"
                     /locus_tag="EYO87_10820"
     CDS             <1..524
                     /gene="hisG"
                     /locus_tag="EYO87_10820"
                     /EC_number="2.4.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018000219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase"
                     /protein_id="HIC66471.1"
                     /translation="GRIDLGVTGTDLVREKLAGWRDLVIEIAPMGFGHADLILAVPEC
                     WRDCETLDDLTAIARDFRATHGFRLRVATKYHRLVRAWLAAHEVADYQLVDSQGATEG
                     TIANQTAEAIADITSSGATLRANNLKILSEEPILRSQATLFAARAAMGPELAGFLAQL
                     GTDLQNDSLPPNP"
     gene            complement(600..2228)
                     /locus_tag="EYO87_10825"
     CDS             complement(600..2228)
                     /locus_tag="EYO87_10825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrkH family potassium uptake protein"
                     /protein_id="HIC66472.1"
                     /translation="MNLILRLPLLILLSVLSGLAMLVPAIYASVINQDAIARNFLYAA
                     LLVLIVTGMIALATSANRRRPRSRDTLLSMLAVMGLMPLILAIPLAESLPDTGLFNAW
                     WEMVSALTTTGASLYSADLLPMPLHLWRAMVGWMGGFFMLVAAIAILAPLRVGGFEIM
                     STPYGRSEDFEQLPRSSDPRVRQPHLSSPIFHTELADPAYRLVRAAMQVFPVYAGLTL
                     ALWMILLLLGDSSILALTRAMGTLSTSGITPVIGPSGERSGIAGEMAVFLFLIPALSR
                     RFWPGGGELRATRRLIEDPELKMAVGLIALVAAALFLRHFIGAIEAGVGNDPALPSLI
                     DLRNGLAAFWGGMFNALSYLTTTGWNSVDWQGSRAWSGLSSPGLILAGLALMGGGVAT
                     TAGGVKLLRVYSLARHGERELERIIHPSSVSGGGRIARRLRREGAYLAFIFFMLFASS
                     IAVTVALVSIQQIEFETATILSIAALTNTGPLAGAIPLTPAFEASAGIASAPWEGWSG
                     LPAMTKIVLACAMVVGRLEILAILALFSPEFWRR"
     gene            complement(2241..>2617)
                     /locus_tag="EYO87_10830"
     CDS             complement(2241..>2617)
                     /locus_tag="EYO87_10830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Trk system potassium transport protein TrkA"
                     /protein_id="HIC66473.1"
                     /translation="NDPTLVSLMGALDIDAYINPRATTVSTILRHIRHGRVRDIYSIG
                     DAEAEVMEAQVLSTSPMSGRAIRDIDFPEGALIGAVQKGDRILKPSPDTRIEEGDIVL
                     IFALTHDVPEVERLLQVSIDFF"
BASE COUNT          498 a          861 c          883 g          375 t
ORIGIN      
        1 cgggccggat cgatctgggt gtcaccggca ccgatctggt gcgcgagaag cttgcggggt
       61 ggcgcgatct ggtgatcgag atcgcgccga tgggctttgg tcatgccgac ctgatcctcg
      121 ccgtgccgga atgctggcgt gattgcgaga cgctggacga tctgaccgcg atcgcccgcg
      181 atttccgcgc gacgcatggt ttcaggctgc gcgtcgcgac caagtatcat cggctggtcc
      241 gggcatggct ggccgcgcat gaggtggccg actaccagct tgtcgacagt cagggcgcga
      301 ccgagggcac aattgccaac cagaccgccg aggccatcgc cgacatcacc tcgtccgggg
      361 cgacgttgcg ggccaacaac ctgaagatcc tgtccgagga accgatcctg cgctctcagg
      421 caacgctgtt cgcggcgcgc gcggcgatgg gtccggaact ggcagggttt ctggcgcagc
      481 ttggtacgga cctgcagaac gacagcctgc cccccaatcc gtgacgcggg gcttcaaggc
      541 cgacatggct gagtgatgaa ccgctctttc ccggccatcc cgcgcatcgc caccccgctt
      601 cagcgccgcc agaattcggg cgagaacagc gccagaatgg ccagaatttc cagtcggccg
      661 acgaccatgg cgcaggccag cacgatcttg gtcatcgcgg gcaggcccga ccagccctcc
      721 cacggggccg aggcgatgcc ggcgctggcc tcgaaggcgg gcgtcagcgg gatcgcgccg
      781 gccagtggcc cggtattggt cagcgccgcg atcgacagga tcgtcgcggt ctcgaactcg
      841 atctgctgga tcgagacaag cgcgaccgtc accgcgatgg aactggcaaa gagcatgaag
      901 aagatgaacg ccagataggc gccttcgcgc cgtagccgac gcgcgatccg cccgccgccc
      961 gaaaccgatg agggatggat gatgcgttcc agttcccgtt cgccgtggcg ggccagtgaa
     1021 tagacgcgca acagcttgac cccgcccgcc gtcgtcgcga cgccaccccc catcagcgcc
     1081 agcccggcaa ggatcaggcc cggcgaggac aggcccgacc aggcccgcga tccctgccag
     1141 tcgaccgaat tccagccggt cgtggtcagg tagctgagcg cgttgaacat gccgccccag
     1201 aaggcggcca gcccgttgcg cagatcaatc aggctgggca gcgccgggtc gttgcccaca
     1261 ccggcctcga tcgcgccgat gaaatggcgc agaaacaggg ccgccgcgac cagcgcgatc
     1321 aggcccaccg ccatcttcag ctcgggatcc tcgatcagcc ggcgggtggc gcgcaattcg
     1381 ccgccccccg gccagaagcg ccgcgacagg gcggggatca ggaacaggaa caccgccatc
     1441 tcgccggcga tgcccgaacg ttcgccggag ggaccgatga ccggggtgat cccgctggtc
     1501 gacagcgtgc ccatcgcgcg cgtcagcgcc aggatcgagc tgtcgcccag cagcagcagg
     1561 atcatccaaa gggccagtgt caggccggca tagacaggaa agacctgcat cgcggcgcgg
     1621 accagccggt aggcaggatc ggccagttcc gtgtggaaga tcggcgagga cagatgcggt
     1681 tgccgcacgc gcggatccga cgatcggggc agctgttcga aatcctcgct gcggccatag
     1741 ggcgtggaca tgatctcgaa cccgccgacc cgcagcggtg ccagaatggc gatggcggcg
     1801 accagcatga agaagccgcc catccagccg accatcgccc gccacagatg cagcggcatc
     1861 ggcagaagat cggcggaata aagcgaggcg ccggtcgtgg tcagcgccga caccatctcc
     1921 caccaggcat tgaacagacc ggtatcgggc aggctttcgg ccagggggat ggccaggatc
     1981 agcggcatca gtcccatcac cgccagcatc gacagcagcg tgtcgcgcga acgcggcctg
     2041 cggcggttgg ccgatgtggc cagcgcgatc atcccggtca cgatcaggac cagaagcgcc
     2101 gcgtagagaa agttgcgcgc gatcgcgtcc tgattgatga ccgaggcata gatggccgga
     2161 accagcatcg ccagccccga caggacggat agcaggatca gcagcggcag gcgcaggatc
     2221 aggttcattc gcctcgcgcc tcagaagaag tcgatcgaga cctgcaacag gcgctcgacc
     2281 tcgggcacgt catgggtcag ggcgaagatc agcacgatgt cgccttcttc gatgcgggtg
     2341 tccggggacg gcttcaggat ccggtcgccc ttctgcaccg cgccgatcag cgcgccctcg
     2401 ggaaagtcga tatcgcggat ggcgcggccg gacatcgggc ttgtggacaa aacctgcgcc
     2461 tccatcacct cggcctcggc atcgccgatg gaatagatgt cgcgcacccg gccgtggcga
     2521 atatggcgca agatggtcga gacggtggtc gcgcggggat tgatataggc gtcgatgtcc
     2581 agcgcgccca tcagggacac cagcgtcggg tcgttga
//
LOCUS       DTVW01000827            1463 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2013583, whole
            genome shotgun sequence.
ACCESSION   DTVW01000827 DTVW01000000
VERSION     DTVW01000827.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1463)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1463)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1463
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2013583"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..389
                     /locus_tag="EYO87_10835"
     CDS             <1..389
                     /locus_tag="EYO87_10835"
                     /inference="COORDINATES: protein motif:HMM:PF01520.16"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HIC66474.1"
                     /translation="QLTLRHDRDDLLTGVDLSGQDDALAAAMMDFARTDIQPRSQDFA
                     RWLASRMALMAIGLHADPVQGAAFSVLKSPDIPSVLLELGFISDSTDRANLTDPAWRA
                     GMVRALAQAVQGWARDQATRAPMLRQ"
     gene            482..>1463
                     /locus_tag="EYO87_10840"
     CDS             482..>1463
                     /locus_tag="EYO87_10840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018000212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein"
                     /protein_id="HIC66475.1"
                     /translation="MLRAILSFFGAIFSWITTASFFAALTVGGIFWVYSRDLPSYETL
                     AQYSPKTISRIYSGEGRLIDEFAEERRIFVPVEEIPVLVKEAFISAEDKNFYVHPGYD
                     IRGIVGAAFEAARTGVRELRGASTITQQVMKNFLLSSDRSVERKVKELILASRLERSL
                     SKDKILELYLNEIYLGQNSYGVAAAAQVYFNKSLTELAPHEAAMLAALPQAPGRYHPV
                     RQKDRVTERRNYVLREMWQNGYLDEATYQAEARLPLKSVQNGDYPDFREQMPTRDYFT
                     DEIRRQLSREFGYDEFFGGGLTIRATVDPNLQAAAAEALREALEQYDRGRG"
BASE COUNT          258 a          469 c          466 g          270 t
ORIGIN      
        1 cgcaactgac gctgcgccat gaccgcgacg atctgctgac cggggtcgat ctgtcgggac
       61 aggatgatgc cctggccgcc gcgatgatgg atttcgcccg caccgatatt cagccccggt
      121 cgcaggattt cgcgcgctgg ctggcttcgc gcatggcgct gatggcgatc gggctgcacg
      181 ccgacccggt gcagggcgcg gccttttcgg tgctgaaatc gcccgacatc ccgtcggtcc
      241 tgctggagct tggattcatc tcggattcga ccgatcgggc caatctgacc gatcccgcct
      301 ggcgggcggg catggtgcgg gcgctggccc aggcggtcca gggctgggcg cgcgaccagg
      361 cgacgcgcgc cccgatgctg cgacaataga cccacacagc cctgtgaggc ggcgttgttg
      421 ttttgacccg tccccgccgc accgctatag acatctcacc aagtcgagag gcctcgctac
      481 cgtgctgcgc gccatcctgt ccttcttcgg ggcgatcttt tcctggatca cgaccgcgag
      541 cttctttgcg gcgctgaccg tcggtggcat tttctgggtc tattcgcgcg atctgcccag
      601 ctacgagacg ctggcccagt acagccccaa gaccatcagc cggatctatt ccggcgaggg
      661 acgtctgatc gacgaattcg ccgaggaacg gcgcatcttc gtgccggtcg aggaaatccc
      721 ggttctggtg aaggaggcgt tcatcagcgc cgaggacaag aatttctacg tccatcccgg
      781 ctacgacatt cgcggcatcg tgggagcggc attcgaggcc gcgcgcaccg gtgtacgcga
      841 gttgcgcggt gcctcgacca tcacccagca ggtgatgaag aattttctgc tgtccagtga
      901 ccgcagcgtc gagaggaagg tgaaggagct gatcctcgcc tcgcggctgg aacgatcgtt
      961 gtccaaggac aagatcctgg aactttatct gaacgagatc tatctgggcc agaacagcta
     1021 tggcgtcgcc gcggccgcgc aggtctattt caacaagtcg ctgaccgaac tggccccgca
     1081 tgaggcggcg atgctggccg cgctgccgca ggcacccggc cgctatcatc ccgtgcgcca
     1141 gaaggaccgg gtcaccgaac gccggaatta tgtcctgcgc gagatgtggc agaacggcta
     1201 tctcgacgag gcgacctacc aggccgaggc caggctgccg ctgaaatcgg tgcagaacgg
     1261 cgattatccc gatttccgcg agcaaatgcc gacgcgcgac tatttcaccg acgagattcg
     1321 ccgccagttg agccgcgaat tcggctatga cgagtttttc ggcggaggtc tgaccatccg
     1381 cgccaccgtc gatcccaacc tgcaggccgc cgccgccgag gcactgcgcg aggcgctgga
     1441 gcaatatgat cgcggacgtg gcc
//
LOCUS       DTVW01000828            1947 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_201359, whole
            genome shotgun sequence.
ACCESSION   DTVW01000828 DTVW01000000
VERSION     DTVW01000828.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1947)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1947)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1947
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_201359"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..714
                     /locus_tag="EYO87_10845"
     CDS             <1..714
                     /locus_tag="EYO87_10845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KpsF/GutQ family sugar-phosphate isomerase"
                     /protein_id="HIC66476.1"
                     /translation="ASHGDLGMVTQGDAALILSNSGETPELADLVAHTRRFAIPLIAV
                     ASRPESTLLRQADVALVLPAAEEACGRGIVPTTSTTMTLALGDALAVALMEHRQFTAE
                     HFRTFHPGGKLGALLSKVGDLMHSDMPLIGESAPMADALLVISQKGYGVTGVTDGSGA
                     LVGIITDGDLRRHMQGLLDYRADEVMTRDPRTIAPDALAEAALAEMQDRKITCLFAVR
                     GGRPEGILHIHDCLRAGLV"
     gene            719..1297
                     /locus_tag="EYO87_10850"
     CDS             719..1297
                     /locus_tag="EYO87_10850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66477.1"
                     /translation="MGRTRIVRWLRVLLPLAALAILSTLFLFSRRPEEDSRIPYAQVD
                     AEQMAREPRLVAPDYTGVTDDGAELSLSASEATPPGQGAGAARDVRLDWRRKDGLTAD
                     LTAPRAGLADGLIGLRGGVRMTTSSGWRMDAPSVDAATDRSLIRATGGVEAEAPFGSI
                     RADRMDLQPKREDGAGAAVLNFSGSVRLIYQP"
     gene            1320..1796
                     /gene="lptA"
                     /locus_tag="EYO87_10855"
     CDS             1320..1796
                     /gene="lptA"
                     /locus_tag="EYO87_10855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020040543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide transport periplasmic protein
                     LptA"
                     /protein_id="HIC66478.1"
                     /translation="MLRPLTIALTLLAAPALAQNVAFGGMTADTSAPVEVAADNLAVD
                     QADGSAVFTGNVVIGQGEMRLAADSVTVIYAEGGQNRIQALKAQGNVTLTSGKDAAQS
                     ETADYDVASGNIALAGAVVLKQGQNVLTGDRMIVNLADGTARVDGRVRSVLQPGGN"
     gene            1796..>1947
                     /locus_tag="EYO87_10860"
     CDS             1796..>1947
                     /locus_tag="EYO87_10860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HIC66479.1"
                     /translation="MARDTQVRAGGLRVAGLRKSYRNRPVIRDVSVTLDRGEVVALLG
                     PNGSGKT"
BASE COUNT          302 a          650 c          694 g          301 t
ORIGIN      
        1 gccagtcacg gcgatctggg catggtgacg cagggcgatg cggcgctgat tctgtccaac
       61 agcggcgaaa cgcccgaact ggccgatctg gtcgcgcata cccggcggtt cgccatcccg
      121 ctgatcgcgg tcgcttcgcg ccccgaatcg acgctgttgc ggcaggcgga tgtggccctg
      181 gtcctgcccg ccgccgaaga ggcctgcggg cgcggcatcg tgcccaccac ctcgaccacg
      241 atgacgctgg ccctgggcga tgcgctggcc gttgcgctga tggagcatcg tcagttcacg
      301 gccgagcatt tccggacctt tcatccgggt ggcaagctgg gcgcgctttt gtcgaaggtc
      361 ggcgatctga tgcattccga catgcccctg atcggcgaaa gcgcaccgat ggcggacgcg
      421 ctgctggtca tcagccagaa gggatatggc gtaaccgggg tcacggacgg gtccggcgcc
      481 ctggtcggaa tcatcaccga tggcgacttg cggcgccaca tgcagggatt gctggactac
      541 cgcgccgacg aggtgatgac ccgcgatccg cgcaccatcg cccccgacgc cctggccgag
      601 gcggccctgg ccgagatgca ggaccgcaag atcacctgtc ttttcgccgt ccggggcggc
      661 aggccggaag gcattctgca tatccacgac tgcctgcgcg ccggactggt ctaggcggat
      721 ggggcgcacc cgcatcgtcc gctggctgcg cgtgcttctg ccactggcgg cgctggcgat
      781 cctgtccacg ctgttcctgt tctcgcgccg acccgaagag gattcgcgca tcccctatgc
      841 ccaggtcgat gccgaacaga tggcgcgcga gccgcgcctc gtggcgcccg attataccgg
      901 cgtgaccgat gacggtgccg aattgtcgct gagcgccagc gaggcgacgc cgccaggcca
      961 aggggccggc gccgcgcgcg acgtgcggct ggactggcgg cgcaaggacg gcctgaccgc
     1021 cgatctgacc gcgccccggg ccgggcttgc cgatggcctg atcggactgc gcggcggcgt
     1081 gaggatgacc acctcgtcgg gctggcggat ggatgcgccc agcgtcgatg ccgcgactga
     1141 ccgttcgctg attcgcgcga ccggcggggt cgaggccgag gcgccgttcg gcagcatccg
     1201 tgcagaccgc atggatctgc agccaaagcg cgaagacggg gcgggcgcag cggtcttgaa
     1261 tttctcgggc tccgtccgtt tgatatacca accctgaacc ccggacgagg atgcccgcca
     1321 tgctgcgccc cctgaccatc gccctgaccc tcctggccgc gcccgccctg gcgcagaacg
     1381 tggccttcgg cggcatgacg gccgacacct cggccccggt cgaggtcgcc gccgacaatc
     1441 ttgccgtcga tcaggcggat ggcagcgcgg tcttcaccgg caatgtggtg atcggccagg
     1501 gcgagatgcg gctggccgcc gacagcgtga cggtaatcta tgcagagggc gggcagaacc
     1561 ggatccaggc gctgaaggcc caggggaacg tgaccctgac ctcgggcaag gatgcggcac
     1621 agtccgaaac ggccgattac gacgttgcca gtggcaatat cgcgctggcc ggcgcggtgg
     1681 tgctgaaaca gggccagaac gtgctgaccg gcgaccgcat gatcgtcaac cttgccgacg
     1741 gcaccgccag ggtcgatggc cgggtgcgat ccgtgctcca gcccggcggc aattgatggc
     1801 gcgggacact caggtcaggg caggcgggct gcgggtcgcg gggctgcgca aatcctatcg
     1861 caaccggccg gtgatccgcg atgtctcggt cacgctggac cggggcgagg tggtggcgct
     1921 gctggggccg aacgggtccg gcaagac
//
LOCUS       DTVW01000829            1121 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2014300, whole
            genome shotgun sequence.
ACCESSION   DTVW01000829 DTVW01000000
VERSION     DTVW01000829.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1121)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1121)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1121
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2014300"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..909
                     /gene="ald"
                     /locus_tag="EYO87_10865"
     CDS             <1..909
                     /gene="ald"
                     /locus_tag="EYO87_10865"
                     /EC_number="1.4.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005979108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine dehydrogenase"
                     /protein_id="HIC66480.1"
                     /translation="IVKVKEPQASERAMLRRGQVLFTYLHLAPDPDQTRDLLESGVTA
                     IAYETVTDRAGGLPLLAPMSEVAGRLAPQVGAWTLQKANGGRGVLMGGVPGVLPARVT
                     VIGGGVVGTHAARVAAGMGASVTVLDRSLPRLRYLDDVFGGLFSTGHASGALTEELVA
                     ASDMVIGAVLVPGAAAPKLVRREQLAMMLPGAVLVDVAIDQGGCFETSKPTTHEDPIY
                     EVDGIMHYCVANMPGAVARSSTQALGNATLPFLLALADKGWRRAVTDDPHLRAGLAVH
                     DGQLTSPPVGEALGLVSVSPDTLLAG"
     gene            complement(953..>1121)
                     /locus_tag="EYO87_10870"
     CDS             complement(953..>1121)
                     /locus_tag="EYO87_10870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="MscL family protein"
                     /protein_id="HIC66481.1"
                     /translation="IIAWVVFLLVKGVNRMQEAAARNREIPEETAPSAPTQEELLAQI
                     RDLLADRANPV"
BASE COUNT          160 a          359 c          418 g          184 t
ORIGIN      
        1 atcgtcaagg tcaaggagcc tcaggcaagc gaacgcgcga tgctgcgcag gggtcaggtg
       61 ctgttcacct atctgcatct ggcgcccgat ccggaccaga cacgcgacct gctggaatcc
      121 ggtgtcaccg cgatcgcgta tgaaaccgtg accgatcgcg cgggcggact gccgctgctg
      181 gcacccatgt ccgaggtcgc gggccggctg gcaccgcagg tgggggcgtg gacgctgcaa
      241 aaggccaatg gcgggcgggg cgtgctgatg gggggcgtgc cgggtgtcct gcccgcccgc
      301 gtcaccgtga tcggcggcgg tgtcgtcggc acccacgcgg cgcgtgtcgc tgcggggatg
      361 ggggcgtcgg tgacggtgct ggaccgatcc ctgccgcggt tgcgctatct cgatgatgtc
      421 ttcggcggat tgttcagcac cggccatgcc agcggcgcgc tgaccgagga actggtcgcg
      481 gcgtcggaca tggtcatcgg ggccgtgctg gtccccggcg ccgccgcgcc gaaactcgtg
      541 cggcgcgaac aattggccat gatgctgccc ggcgcggttc tggtcgatgt ggcgatcgac
      601 cagggcggct gtttcgaaac ctcgaaaccc accacccacg aggatccgat ctatgaggtg
      661 gacgggatca tgcattattg cgtggcgaac atgcccggcg cggtcgcgcg aagctcgacc
      721 caggcgcttg ggaacgccac gctgcccttc ctgctggcgc tggccgacaa gggctggcgg
      781 cgggcggtga ccgacgatcc gcatctgcgc gcaggcctgg ccgtgcatga cgggcagctg
      841 acctcgccgc cggtgggcga ggccctgggc ctggtctcgg tcagccccga cacgctgctg
      901 gcgggctgag tgcgccgggc gggcagaggc cagaccctgg cggtcacatg gatcagaccg
      961 ggttggcgcg gtcggccagc agatcgcgga tctgggccag caattcttcc tgggtcgggg
     1021 ccgagggcgc cgtttcttcc gggatctccc tgttgcgggc ggcggcttcc tgcatccggt
     1081 tcacaccctt gaccagcagg aacacgaccc aggcgatgat g
//
LOCUS       DTVW01000830            1831 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2019763, whole
            genome shotgun sequence.
ACCESSION   DTVW01000830 DTVW01000000
VERSION     DTVW01000830.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1831)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1831)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1831
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2019763"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..826
                     /locus_tag="EYO87_10875"
     CDS             <1..826
                     /locus_tag="EYO87_10875"
                     /inference="COORDINATES: protein motif:HMM:PF03466.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HIC66482.1"
                     /translation="QLFLRERGGVTPTPAADSFYRNCLEVLRVHASARRDVTRFAKSE
                     TGEIHVGLMPTITSRVLSPVLDRFLRESPNVNVRITESYSASLTQTVQAGELDFAIVP
                     SDSSATGLRGSFFVRTPEVLVSRAGGDVGPLTPVCLRDLAPLKLVVPGGNNIRRHTIE
                     SYCTTNAIRIGQLLELDTMLGTLDFVANSDWVTILPAVMMAEDGGHRALSVNPIIGPE
                     MHIDLMLIEPIRRPMSNLAARFADLLRTEAQHVSAAWSSEGLRLVQPARPAAVAPR"
     gene            complement(1017..>1831)
                     /locus_tag="EYO87_10880"
     CDS             complement(1017..>1831)
                     /locus_tag="EYO87_10880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011046958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HIC66483.1"
                     /translation="LMDMKGGNYIALEAIRQLARAGMQTPLPVTVLFTPDEEVGTPST
                     RDLIEAEAARNAYVLVPEPGHDDGGVTIGRYAIARFNLKTKGRPSHAGARLSDGKSAI
                     AAMARRIIEIEDMTGPDCTFSVGVIRAGQWVNCVSSSCEAEALSMAKRQNDLDSGVQR
                     MLALQGSENGVEFIVERGVTRPVWEPDTPGTARIFDIARDIAKELGFEMKGRSQGGGS
                     DGNFTGAMGIPTLDSLGVLGDGLHTLGEHICVDSLTTRAKLMAALLMRLERA"
BASE COUNT          316 a          633 c          563 g          319 t
ORIGIN      
        1 gcaacttttc ctgcgcgaac gcggcggtgt gacgcccact ccggcagccg acagtttcta
       61 ccgcaactgc ctcgaggtgc tgcgtgttca tgcctcggcg cgccgcgatg tgacgcgttt
      121 cgccaagagc gagacgggcg agatccatgt cggcctgatg ccgaccatca ccagccgcgt
      181 tctctcgccc gttctcgaca ggttcctgag ggaatcaccg aacgtgaacg tccgcatcac
      241 cgaaagctac agcgccagcc tgacgcaaac ggtgcaggcc ggcgaactgg atttcgccat
      301 cgtgccctcg gacagttccg ccaccggatt gcgcggcagc ttcttcgtgc gcacgcccga
      361 ggttctggtg tcgcgcgcag gcggcgatgt cgggccgctg acacccgtct gcctgcgcga
      421 tctggctccg ctcaagctgg tcgttccggg gggcaacaac atccgccggc acacgataga
      481 aagctattgc acgaccaatg ccatccggat cggccagttg cttgagctgg acacgatgct
      541 cggcacgctg gatttcgtgg ccaacagcga ttgggtgacc atcctgcccg ccgtcatgat
      601 ggcagaagac ggcgggcatc gcgccctgag cgtgaacccg atcatcgggc cagagatgca
      661 tatcgacctg atgctgatcg aacccatccg tcgcccgatg agcaaccttg ccgcccgttt
      721 cgctgacctc ctgcgaacag aggcgcaaca tgtcagcgcg gcctggagca gcgaggggct
      781 gcgccttgtc cagcctgcgc gtccggccgc ggtggccccg cgctgatccg ggttgcggcg
      841 gcgacagcga tggatcggag aaactgcgcc agagggcaaa ggcccggggg aaaatgaccg
      901 cgggcaaggt cgttgccacg gcgccatcgc caaccccacg ggcgatccgc accggcggga
      961 caggaccatc cacgggacct gtcgcatggg gtcacgccac tgggcgcaac ggaatgtcag
     1021 gctcgttcca gccgcatcag caaggccgcc atcagtttcg cccgcgtggt caggctgtcc
     1081 acgcaaatgt gttcaccgag cgtatgcagc ccgtcgccca gcacgccaag cgaatccaga
     1141 gtggggatcc ccatcgcgcc ggtaaaattg ccgtcggatc cgccaccctg actgcggccc
     1201 ttcatctcga agccaagttc cttcgcgatg tccctggcaa tgtcaaagat ccttgccgtt
     1261 ccaggcgtgt cgggttccca gacgggccgg gtgacgccac gttcgacgat gaactccacg
     1321 ccgttttcgc ttccttgcag ggccagcatc cgctggacgc cgctgtccag atcattctgg
     1381 cgcttcgcca tgctcagcgc ctcggcctcg cagcttgacg acacgcaatt gacccattgc
     1441 cccgctcgga tcaccccgac ggaaaacgtg caatccggtc cggtcatgtc ctcgatctcg
     1501 atgatgcgac gcgccatcgc ggcgatggcg gatttgccgt ccgagagccg cgcaccggca
     1561 tggctgggcc ggcccttcgt cttcagattg aaccgcgcga tggcatagcg tccgatcgtc
     1621 accccgccat cgtcatggcc cggctcgggg accagaacat aggcattgcg cgccgcctcc
     1681 gcctcgatga gatcgcgggt cgagggtgtg ccgacctcct cgtcgggcgt gaacagcacc
     1741 gtcaccggca gcggcgtctg catccccgcc ctggcaagct ggcggatcgc ctccagcgcg
     1801 atgtagttgc cgcccttcat gtccatgagc c
//
LOCUS       DTVW01000831            1944 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2022701, whole
            genome shotgun sequence.
ACCESSION   DTVW01000831 DTVW01000000
VERSION     DTVW01000831.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1944)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1944)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1944
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2022701"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(1..573)
                     /locus_tag="EYO87_10885"
                     /pseudo
     CDS             complement(1..573)
                     /locus_tag="EYO87_10885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611978.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
     gene            complement(646..774)
                     /locus_tag="EYO87_10890"
                     /pseudo
     CDS             complement(646..774)
                     /locus_tag="EYO87_10890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018064967.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="integrase"
     gene            complement(789..1707)
                     /locus_tag="EYO87_10895"
                     /pseudo
     CDS             complement(789..1707)
                     /locus_tag="EYO87_10895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008757443.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
BASE COUNT          321 a          622 c          608 g          393 t
ORIGIN      
        1 cccctagccg gtggatgtcc cgttcgatca aggcgttgcg gaaccactcg gcgtcgtagc
       61 cgcgatccgc caggagggtt tttgccgtcg gcagcgacgc cagcaatgcc cgcgccccga
      121 tgtagtcgct ggtctggccg gcgctcagga acatcccgat cggacgcccc tttccgtcgg
      181 ccacggtgtg caacttggag ttcagcccgc ccttgctgcg cccaatgaag cgactgtgcc
      241 cccctttttg ccccgcaggc tggcggccgt ccggtgcgcc ttgaggtgag tggcatcgat
      301 catcagcgtg tcccgctccc gccccgctgc ggccaattcg gtcaggatgc aggcgaacac
      361 acccaaccgg ctccaacgga cccaacgatt gtagagcgtc ttcggcggtc cataggctgc
      421 gggcgcatcc ctccagcgca aaccattgcg attgatgaag ataatcccgc tcagcacccg
      481 acggtcgtca actctcggct tgccgtggga cagtggaaag aacggcctga ggcgctccat
      541 ctgcgcctca gtcagccaaa acagatcgct catgcggcac ctccatgatg ccgacagaga
      601 ttcagaagca agctgaacac gcaagaggtt taacgggtcc tgaccctaac tctgtgccgc
      661 gcgcatcttc tgcgaagcgg cctgggcgcg caccttttgg ctggccgctt tgatgtatcg
      721 cgtgacctct ttggacgtct gatgcccggt gatcgccatg atttcgaact cagtagtatc
      781 cgttttgatc aaggggcaat ttcggcccat ttccggttgt cccggatcag ggcgttggcg
      841 agtatgatga gcttgcgcat caccgccgtg atcgcgccct tccagggctt tccgccctcg
      901 tagagcgcga ggtaggtttt cctgagtggc gcgttgtatc gggtcgcaat gacggctggc
      961 atgaacagca aggtgcgaag accgcagcga ccgccgaaga tgcgggcttt ccctttccag
     1021 ctcccagact gccgggtgac tggcgcgagg ccggccaggc tcgcggcctc tttcggggtc
     1081 atcatgccga gttcgggcat gtcgacgatc atggcggtgg ctgccaccgg tccgatgccg
     1141 cggatggaca tcgggatctc gtatcgccgg gccagctcgg ggtcggcctt gatgaggcgg
     1201 accaactcgg catcgatctg ggcgatctgc ctgtcgatct ggcgttcccg cgccttgagt
     1261 tgggtgacga ccatcctgtt gcgcgccgtg tccagccggt tccggcaggc ggtgcgatcc
     1321 ttgatcagag ccacgcgcgc gacatgcagc tccttgattt cgtgcatgct cttgctgcga
     1381 accggcgtcg gctcgagcgc cagggtcgat cccatgtgcg cgagcatccg ggcgtcgacg
     1441 cggtcggtct tggcgatgtt tccggtcgcc tgcgcgtagc ggcgggcccg tgagggattg
     1501 accttgaccg gcccgtgtcc cgccttcgag atcgcgatga aagcgacccg tcgcctcgta
     1561 gacgatgcgg accggcgtgc tcccgagcca ttggcagagc gccttgagcc cgtccctgtc
     1621 gttcgaaaac cgcatgtgcc tgcggtcgga aaggcgccag acttcgagac tggctttgga
     1681 aatgtccaca ccgatggtat cgttcattgc ttttcgtctc ctggccttgt catgcggggc
     1741 aacgggcaga ccgttcccca ggtatccgtt caggacatgc gaaaagcggg gggtgaccaa
     1801 actactgacc ggccctgatg agaccacctc cgaaacggcc cggcctcccg ctgcttcccg
     1861 gcatatttgg gctgccggga agcagctccc gtatcgcacg ggaaccgggg ttctcattaa
     1921 gacaacatcc aagctctgcg aggc
//
LOCUS       DTVW01000832            2254 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2022903, whole
            genome shotgun sequence.
ACCESSION   DTVW01000832 DTVW01000000
VERSION     DTVW01000832.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2254)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2254)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2254
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2022903"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..191)
                     /locus_tag="EYO87_10900"
     CDS             complement(<1..191)
                     /locus_tag="EYO87_10900"
                     /inference="COORDINATES: protein motif:HMM:PF13358.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HIC66484.1"
                     /translation="MANHLERLVFIDEASVKTNMARTTGWAPCGQRLVDHAPFGHWRT
                     QTFVAALRHDRLEAPWVCDL"
     gene            complement(253..618)
                     /locus_tag="EYO87_10905"
     CDS             complement(253..618)
                     /locus_tag="EYO87_10905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002822798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HIC66485.1"
                     /translation="MGKPHPIELRVRVVAFVDEGHGHREAARHFRVSPKFVNDLIKPR
                     RETGSLAPRPQGNGGGYGKLAGVTGRIEARVADKGEITLDELAAEPARTHGIDMHRGT
                     VWRALRGLGLTHRKRPSGA"
     gene            complement(704..1291)
                     /locus_tag="EYO87_10910"
     CDS             complement(704..1291)
                     /locus_tag="EYO87_10910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008333177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HIC66486.1"
                     /translation="MYTIIGTAKSRSFRVLWMLEELGQAYRHVPANPHGEGVVEFNPA
                     GKVPVLIDDGTPITDSTAILTYLADRHGRFTHPAGTLDRARQDSLTQFLLDEFDAALW
                     LAARHSFVLPEEMRLGAIRNTLRWEFERSQKTLIHRIGEADFAMGEKMTVPDFILAHC
                     LTWALSARFPVVEPRLTAFLDRMRHRPAFARAAAL"
     gene            complement(1299..1661)
                     /locus_tag="EYO87_10915"
     CDS             complement(1299..1661)
                     /locus_tag="EYO87_10915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011663825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PaaI family thioesterase"
                     /protein_id="HIC66487.1"
                     /translation="MHLGARVVSASKDRIEMEMEVTQSLANRNGVLHGGAIMGLADNA
                     GGTATILNLPSGKSTTTLESKTNFLRPIRIGDVARAICEPLHRGRTTQIWHTRILRGD
                     GKLAAIVTQTQIVLEWKD"
     gene            complement(1785..>2254)
                     /locus_tag="EYO87_10920"
     CDS             complement(1785..>2254)
                     /locus_tag="EYO87_10920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007426935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="lytic transglycosylase"
                     /protein_id="HIC66488.1"
                     /translation="AYMRAMKKAERRWGVPVHVQMAAIHQESKFIGDARTPHRYALGV
                     IPIGRQSSAYGYSQALDGTWKEYRAATGNRGARRNDIEDATDFMGWYMDGSSRRLGIS
                     KWDATSQYLAYHEGRTGFARKSYLSKDWLVQVAGDVGERATMYRNQLVACGKA"
BASE COUNT          371 a          737 c          723 g          423 t
ORIGIN      
        1 aggtcgcaga cccagggcgc ctccagccgg tcatggcgca gggccgcaac gaacgtctgg
       61 gtgcgccaat ggccgaacgg cgcatgatcg accaagcgct gcccgcaggg cgcccagccc
      121 gtcgtcctgg ccatgttggt cttcaccgaa gcttcatcga tgaagaccag gcgttccaga
      181 tggttggcca tgaagggttg acgcttcgcg atccggatgc ggcgctgttc ggcgacgtcc
      241 tttcgcttct gctcaagcgc ctgaaggtct ttttctgtgt gtcagcccga ggccgcgcag
      301 cgcccgccag acggtgccac gatgcatgtc gatgccatgc gtccgggccg gttccgccgc
      361 caattcgtcg agggtgatct cgcccttgtc ggcgacgcgc gcctcgatcc ggccagtcac
      421 gcccgccagc ttgccgtacc cgccgccgtt gccttgcggc cgcggcgcca gcgatccggt
      481 ttcgcgccgc ggcttgatca gatcgttcac gaacttcggc gacacccgga agtgccgcgc
      541 cgcctcgcgg tgcccgtgac cctcatcgac gaacgcaacc acgcgcactc gcagctctat
      601 aggatgtggc tttcccatag gcgaccccca tatctgcctg gaaggcaggg aatcacatta
      661 cagccaatct ggaaatcctg aatcggacag gctgcgacac gctctagagg gcggccgcgc
      721 gggcgaaggc cgggcgatgg cgcatccggt cgagaaaggc ggtcaggcgc ggctcgacca
      781 ccggaaaacg cgcggacagc gcccatgtca ggcaatgggc gaggatgaag tcggggacgg
      841 tcatcttttc gcccatcgcg aaatcggcct cgccgatgcg gtggatcagc gttttctgac
      901 tgcgttcgaa ttcccaccgc aatgtgtttc tgatcgcgcc caaccgcatt tcctccggca
      961 ggacgaagct gtggcgcgcc gccagccaca gcgccgcgtc gaattcgtcc agcaggaact
     1021 gggtcaggct atcctgacgc gcgcggtcca gcgtgccggc cggatgggtg aagcggccgt
     1081 gccggtcggc cagataggtc aggatggcgg tggaatcggt gatcggcgtg ccatcatcga
     1141 tcaggaccgg cacctttccc gccggattga attcgaccac gccctcgcca tgcgggttgg
     1201 ccggcacgtg acgataggcc tggcccagtt cctccagcat ccacagaacg cggaaactgc
     1261 ggcttttcgc ggtgccgatg atggtgtaca tgcgcgggct agtccttcca ttccagcacg
     1321 atctgggtct gtgtgacgat ggcggccagc ttgccgtcgc cgcgcagaat gcgggtgtgc
     1381 cagatttgcg tcgtgcggcc gcgatgcagc ggctcgcaga tggcgcgggc cacatcgccg
     1441 atccggatcg ggcgcaggaa attggtcttg ctctccagcg tggtcgtgct tttgccgctg
     1501 ggcaggttca ggatcgtcgc ggtgccgccg gcattgtcgg ccagccccat gatcgcgccg
     1561 ccatgcagga cgccgttgcg attggcgagg ctttgcgtaa cctccatctc catctcgatc
     1621 cggtccttcg atgcggatac gacccgcgca cccagatgca tggcgaaatc ggattgcagt
     1681 ttggccagat cgcgcaggct ttcgtcagga tcctccacca gcgccccctt cttctttcat
     1741 gccctgatag aggcgcggat caggggcgat ggcaaggggc cgggtcaggc cttgccgcag
     1801 gcgacgagct ggttgcgata catcgtcgcc cgttcgccca cgtcgccggc gacctgcacc
     1861 agccagtctt tagaaaggta ggatttgcgc gcaaagccgg tgcggccctc gtgataggcc
     1921 aggtattgcg aggtcgcgtc ccatttcgag atgcccagcc gccgcgacga accatccatg
     1981 taccagccca tgaaatcggt cgcgtcctcg atatcgttcc gccgcgcccc gcggtttccg
     2041 gtcgcggcgc gatattcctt ccacgtgccg tccagcgcct gggaatagcc ataggcactg
     2101 ctttgccggc cgatgggaat gacgccaagc gcatagcgat gcggcgtgcg ggcatcgccg
     2161 atgaatttcg attcctgatg gatggcggcc atctggacat ggaccggcac gccccagcgg
     2221 cgttcggcct ttttcatcgc acgcatatag gccg
//
LOCUS       DTVW01000833            1164 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2023621, whole
            genome shotgun sequence.
ACCESSION   DTVW01000833 DTVW01000000
VERSION     DTVW01000833.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1164)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1164)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1164
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2023621"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..359
                     /locus_tag="EYO87_10925"
     CDS             <1..359
                     /locus_tag="EYO87_10925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008610230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HIC66489.1"
                     /translation="LAGVVVNDSLLMIDFINRKRLDHADVTAAAREAGVARFRPILLT
                     SLTTFAGLLPIIIDNDIQARSLVPMAISLAFGVVFATVITLILVPAGYVIVEDVRRRL
                     SRRPQPTDRQLATPQT"
     gene            complement(385..>1164)
                     /locus_tag="EYO87_10930"
     CDS             complement(385..>1164)
                     /locus_tag="EYO87_10930"
                     /inference="COORDINATES: protein motif:HMM:PF13483.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HIC66490.1"
                     /translation="SSAAAVLVMLGAASVSAQSSSRIAAEGGDIVITPIIHSSAQVEH
                     AGVVIQVDPWSVGDLSAAKPADLILITDDPGHHLDPEAIAQLRKPGAPVVLTATAHAR
                     FSDGTVLSNGESGLFADIRVEAVGAYDMTPGRPFHPRGEANGYVVTLGGKRLFFSGVG
                     QCVPEIQALQGIDVAFMPMNLPVDRMRPIPLAECVKTFRPKVVYLNHYDQTYTRWLSN
                     PEGAPPPDTQDTPATIRAFQAAIAGEGIEFRDAAWYPPRAR"
BASE COUNT          202 a          394 c          372 g          196 t
ORIGIN      
        1 cgctggccgg cgtggtggtc aacgacagcc tcctgatgat cgatttcatc aaccggaagc
       61 ggctggatca cgccgacgtg acggcagccg cccgggaggc cggcgtggcg aggttccggc
      121 cgatcctgct cacttcgctg accacgtttg ccggactgct gccaatcatc atcgacaacg
      181 acatccaggc gcggagtctc gtgccgatgg cgatctcact ggccttcggg gtggtgttcg
      241 ccaccgtcat caccctcatc ctcgtgccgg ccggctacgt gatcgtcgaa gacgtgcggc
      301 ggcggctgtc tcgccggccg caacccacgg accgacagct cgcaacgcca cagacgtgag
      361 cggcccgtct accgaccttc cgcgctatcg cgctcgcggc ggataccacg cggcatcacg
      421 gaattcgata ccctcgccgg cgatggcagc ctggaacgcg cggatcgtgg ccggcgtgtc
      481 ctgtgtgtcc ggcggcggtg caccctctgg attggagagc catctggtgt acgtctggtc
      541 gtagtggttg agatagacga ccttcggcct gaaggtcttg acacattcgg ccagcggaat
      601 cggccgcatc cgatcaaccg ggaggttcat cggcatgaaa gctacatcga taccctgcag
      661 cgcctgaatc tccggcacgc actgccccac ccctgagaaa aacaggcgct tccctcccag
      721 cgtcaccaca tagccgttcg cttccccacg cggatggaac gggcgccccg gcgtcatgtc
      781 gtaggcgccc accgcctcca cccgaatgtc tgcgaacaga ccactctcac cgttggagag
      841 cacggtgcca tcggaaaatc gtgcgtgggc ggtcgcggtc agtaccacgg gcgccccggg
      901 ctttcgcaat tgagcgatgg cctccgggtc gaggtgatgg cccggatcat cggtaatcag
      961 aatgaggtcg gctggcttcg ccgcggacag gtcgccgacg ctccacggat cgacctggat
     1021 cacgacgccg gcatgctcga cctgcgcgct cgagtgaatg atcggggtaa tgacgatatc
     1081 gccgccctcg gcggcgatcc ggctggacga ctgcgccgac acggacgcgg cgcccagcat
     1141 cacgagcacg gcggcggcgg agga
//
LOCUS       DTVW01000834            3630 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2024279, whole
            genome shotgun sequence.
ACCESSION   DTVW01000834 DTVW01000000
VERSION     DTVW01000834.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3630)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3630)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3630
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2024279"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..431
                     /locus_tag="EYO87_10935"
     CDS             <1..431
                     /locus_tag="EYO87_10935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001312895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="saccharopine dehydrogenase"
                     /protein_id="HIC66491.1"
                     /translation="FTVLQNLGLLSEQPVTTAEGQQIVPLKVVKAVLPDPASLAPDYT
                     GKTCIGDLVRGSLDGKAGEVFVYNVADHKEAFDEVGSQGISFTAGVPPVAAAILIARG
                     TWDVGKMVNVEDLPARPFLDLLGRMGLPSRVIDAAGDHPI"
     gene            541..1779
                     /locus_tag="EYO87_10940"
     CDS             541..1779
                     /locus_tag="EYO87_10940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HIC66492.1"
                     /translation="MVGPQGHNFPRTGREDGVTRVLVNWAVIGIFLIMAFGAVAAARD
                     FLMPVTMAILLFFVFTPLRRFNERRGIPDGATALLVTVSILITVGVIAYAASGPVNRA
                     AARIPTISSQLEYKFQNVRDSMRDLQEAAKKIDDAQNMQEEGGDAATTVRVQQEGEST
                     FAAVLKLTPQLLGQVVFTLILLFFMIASGDLLYLKIVQSFDTMRDKRTAYLALREIED
                     SLGSYLGAITVINACLGFAVGLAMWAWGMPSPLLFGIGAFLLNFIPYLGAIAGVGIAA
                     VVALVVMPGLFWPAMVAASYLALTSLEGQIITPYFVSRRLQMNTVVVFISVALWAWLW
                     SVLGMVIAVPVLVVIRVLSEHVPGWEKFGNFLAGEEPPAIEDEDEEEAREIVESGAPA
                     EDEEAARAVTRPLVADDGRN"
     gene            complement(1887..2324)
                     /locus_tag="EYO87_10945"
     CDS             complement(1887..2324)
                     /locus_tag="EYO87_10945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66493.1"
                     /translation="MFRQIAFAAGLSMAATAGFAQTAETPAQGGGAAPAQKAPQAARI
                     DPAAAYEAARNQLGILKYCQSQGFSGAEAVSAQQKLVGMLPEGDAQAGAAAEQKGTQG
                     TVSLGETQISLKDAASQQGTSEKSQCQRIEAAVNQVASQLPAG"
     gene            2674..3534
                     /locus_tag="EYO87_10950"
     CDS             2674..3534
                     /locus_tag="EYO87_10950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003038669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66494.1"
                     /translation="MPAQPIQRHGLEIDATFATFIEDEVLPGTGVDADRFWSGYAGLL
                     ADFADENSALLARRTELQSQIDAWHKARGNQPWDAAAYREFLTRIGYLVPQPEPFTVE
                     NGEVDPEIASIAGPQLVVPVSNARFALNAANARWGSLYDALYGSDAMGPPPSDGFDPA
                     RRDAVVARVAGFLDDTFPLARGGHSDATGYRADQDGLHVSIEGTEVALANPSAFVGTR
                     SEGQDTAFVLVHHGLHVELVVNPKSPIGSASASGLSDVVLEAALTAIEDCEDSVAAVD
                     AEDKIVVYLE"
BASE COUNT          580 a         1146 c         1237 g          667 t
ORIGIN      
        1 tctttaccgt gttgcagaac ctgggcctgc tgtccgaaca gccggtcacg accgccgagg
       61 ggcagcaaat cgtgccgctg aaggtggtca aggcggttct gcccgatccg gccagccttg
      121 cgcccgacta taccggcaag acctgcatcg gcgatctggt caggggcagt cttgatggca
      181 aggcgggcga ggtcttcgtc tataatgtgg ccgatcacaa ggaggccttc gacgaggtcg
      241 gaagccaggg catcagcttc accgcggggg tgccacccgt cgctgcggcg atcctgatcg
      301 cgcgcggaac ctgggatgtc gggaagatgg tcaatgtcga ggatctgcct gcgcggccct
      361 ttctggactt gctgggccgg atgggcctgc cgtcgcgggt gatcgacgcc gcgggcgatc
      421 accccatctg acgccgcgat tgacaaagat caggccgcgc ggacggttcg gaacaatcgg
      481 ttcgcatcct gcgttccggg cccgggcggg gcgatgaatg cgccgtggag gggggatttc
      541 atggtcggtc cgcaagggca caattttccg cgcaccgggc gcgaggacgg tgtgacgcgc
      601 gttctggtca actgggccgt catcggcatc tttctgatca tggccttcgg cgctgtcgca
      661 gccgcccgtg atttcctgat gccggtgacg atggcgattc tgttgttctt cgtcttcacc
      721 ccgttgcgcc gtttcaacga acgccggggc atccccgacg gggcgaccgc cctgctggtc
      781 acggtcagca tcctgatcac ggtcggcgtc atcgcctatg ccgccagcgg cccggtcaac
      841 cgcgccgcgg cccgcatccc cacgatcagc agtcagcttg aatacaagtt ccagaacgtc
      901 cgcgattcga tgcgcgatct tcaggaggcc gccaagaaga tcgacgacgc ccagaacatg
      961 caagaggaag gcggcgatgc cgcgaccacc gtgcgggtcc aacaggaggg cgaatccacc
     1021 tttgccgccg tcctcaagct gaccccgcaa ttgctgggtc aggtggtctt cacgctgatc
     1081 ctgctgttct tcatgatcgc ttcgggcgat ctgctttatc tgaaaatcgt gcaaagcttc
     1141 gacacgatgc gcgacaagcg caccgcctat ctggcgctgc gcgagatcga ggattcactg
     1201 ggcagctatc tgggcgcgat caccgtcatc aatgcctgcc tgggctttgc cgtcggcctt
     1261 gccatgtggg cctggggaat gccctcgccg cttctgttcg ggatcggggc gttccttctg
     1321 aacttcattc cctatctggg cgccatcgcc ggcgtgggca tcgcggccgt ggtggcgctg
     1381 gtggtgatgc cgggattgtt ctggccggcg atggtggcag cgtcctatct ggcgctgacc
     1441 tcgctggaag ggcagatcat cacaccctat ttcgtgtcgc gccgtctgca gatgaatacg
     1501 gtggtggtct tcatctcggt cgcgctttgg gcctggctgt ggtcggtgct gggtatggtg
     1561 atcgcggtgc cggtgctggt cgtgatccgg gttctttccg aacatgttcc ggggtgggaa
     1621 aaattcggaa acttccttgc cggggaagag cctcccgcga tcgaggacga ggatgaggaa
     1681 gaggcgcgcg aaatcgtcga aagcggcgcg cccgccgagg acgaagaggc ggcgcgcgcc
     1741 gtcacccggc cccttgtcgc cgatgacggg cgcaactgag cagggcgcct cagggtctgc
     1801 gcattatcgg ggatccctga acgaacgggc cggcgcatcg ctgcaccggc ccgccgtcgt
     1861 gccagtcggg gagggagcgc gggcgatcag cccgccggca actggcttgc gacctgattg
     1921 accgccgcct cgatgcgctg gcactgcgat ttttcgctgg tgccctgctg cgaggcggcg
     1981 tccttcagcg aaatctgggt ttctcccagc gagacggtgc cctgggttcc cttctgctcg
     2041 gccgcggcgc cggcctgtgc atcaccctcg ggcagcattc cgaccagctt ctgctgcgcg
     2101 gataccgcct cggcgccaga gaaaccctgg gattggcaat atttcagaat gcccagctgg
     2161 ttccgggcgg cctcataggc ggctgcgggg tcgatcctgg cggcctgggg cgccttctgc
     2221 gcgggcgcgg cgccgccacc ctgggcgggc gtctcggccg tctgggcgaa acctgcggtc
     2281 gcggccatcg aaaggccggc agcgaaagcg atctggcgga acatgtggtt ctcctttgtc
     2341 cgtcaagggc gcgacaccgg aacggcgcgc gcttcctgcg cggccagagg tggcagcggc
     2401 aagggcagag gaaaaccccc cgccgcgcca gaggcggaac cgtgccgatt cgccggtgat
     2461 ctgcccggcg cgatcggcgg gcgcaggccg aagacccggt cttgcgcggg accgcgcgcg
     2521 aatgtgaccg gtcgcgaggg gtgaaaaaat ccgctgaaac ccccgctcgc acatggcggc
     2581 ctatggtccc cggcggctac ggtgcgctat tgtatacatc gaccgccgcc gcgccgcggc
     2641 cgcgaccggc accgcagcta caggaggatg accatgcccg cccagcctat ccagcgacac
     2701 ggacttgaaa tcgatgcgac tttcgcgacc ttcatcgagg acgaggtcct gcccggcacc
     2761 ggggtcgatg ccgatcgctt ctggtccgga tatgcagggc tgctggcgga tttcgccgac
     2821 gagaacagcg cgctgctggc ccggcgtacc gaattgcagt cgcagatcga cgcctggcac
     2881 aaggcgcgcg gcaaccagcc ctgggacgcc gcggcctatc gcgaattcct gacccgcatc
     2941 ggctatctgg tgccgcagcc cgaacccttc accgtcgaga atggcgaggt cgatcccgaa
     3001 atcgccagca ttgccggtcc gcagctggtc gtgccggtca gcaatgcccg tttcgcgctg
     3061 aatgcggcca atgcccgctg gggatcgctt tacgatgcgc tatacggatc ggacgcgatg
     3121 gggccgccgc catcggacgg attcgacccg gcgcggcgcg atgccgtcgt ggcgcgtgtc
     3181 gccggattcc tggacgacac ctttccgctg gccaggggcg gtcattccga cgccaccggc
     3241 tatcgcgcgg atcaggatgg gctgcatgtg tcgatcgagg ggaccgaggt cgcgctggcc
     3301 aacccttcgg cctttgtcgg cacccggtcc gagggccagg ataccgcctt cgttctggtc
     3361 catcacgggc ttcatgtgga actggtcgtg aacccgaaaa gcccaatcgg gtcggcctcg
     3421 gcgtccgggc tgagcgacgt ggtcttggag gcggcgctga ccgcgatcga ggattgcgag
     3481 gacagcgttg ccgcggtcga tgccgaggac aagatcgtcg tttatttgga atgaccacaa
     3541 aaacgccggg agcgtttttg tgcgctcgcc ccgaaggggt gaagcacagg atgttgtcgt
     3601 gggtcgaggc cacgaacagg gacttcagca
//
LOCUS       DTVW01000835            1759 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2027456, whole
            genome shotgun sequence.
ACCESSION   DTVW01000835 DTVW01000000
VERSION     DTVW01000835.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1759)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1759)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1759
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2027456"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..269
                     /locus_tag="EYO87_10955"
     CDS             <1..269
                     /locus_tag="EYO87_10955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018001721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="disulfide bond formation protein DsbA"
                     /protein_id="HIC66495.1"
                     /translation="QPRWASRGTPPPGLILEIATAAGLDAEAARTQMQSPDVVAILNQ
                     DRADVETLGIRQTPTFFVNDKPLDPFGEAELRRLVSAEVAAAQS"
     gene            294..761
                     /locus_tag="EYO87_10960"
     CDS             294..761
                     /locus_tag="EYO87_10960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020038273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper chaperone PCu(A)C"
                     /protein_id="HIC66496.1"
                     /translation="MKDLLFAGALAALLTVAGLSSPALAGSGDVVVAGAWARASIGVK
                     RPGAAYMTIRNTGEEPVTLTGLATPLAMMPEIHESRTDAQGISSMTPAGRITIAPGDS
                     VALEPGGLHAMLMGLQAPMTEGETFPLTLLFEDGGQTIVEVPILGIAARGPGD"
     gene            761..1387
                     /locus_tag="EYO87_10965"
     CDS             761..1387
                     /locus_tag="EYO87_10965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008889345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCO family protein"
                     /protein_id="HIC66497.1"
                     /translation="MRRRAFLGYGAAGLGALSLTLAVGWWRVDGPGAPDAAGLRPMAL
                     SAMDFRLTDHEGNSVGPKSLIGRPTMVFFGFTYCPDVCPTTLSDISGWLDELGPDGDE
                     WNVVLITVDPARDTVRAMADYLGYFHPAIRGWTGPEPQIARAAAGFRATYERVPTENG
                     DYTMNHTSGVFLFDAEGLFVTMIDYHEPREFAIPKIRRAMKKEAKAAS"
     gene            complement(1427..>1759)
                     /locus_tag="EYO87_10970"
     CDS             complement(1427..>1759)
                     /locus_tag="EYO87_10970"
                     /inference="COORDINATES: protein motif:HMM:PF00034.19"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HIC66498.1"
                     /translation="VPMAAPGGPPATPEALLSLGRRIALDGIAEAGIPSCQSCHALGP
                     KPRSPDFPALAGQPEWYLARQLVLWRDGKRGGTPFAPVMEAIAERMTEEQIDAVSAWY
                     AGRPRSDR"
BASE COUNT          281 a          574 c          611 g          293 t
ORIGIN      
        1 aacagcccag atgggcttcg cgcgggacgc cgccgccggg cctgatcctc gagatcgcga
       61 ccgccgccgg cctcgacgcc gaggcggcgc gcacgcagat gcaatcgcct gacgtcgtgg
      121 caatcctgaa ccaggaccgc gccgatgtcg aaaccctggg tatccgccag acccccacct
      181 tcttcgttaa cgacaagccg ctcgacccgt tcggcgaggc cgaattgcgg cgcctggtct
      241 cggccgaagt cgccgcggcg cagagttgaa tggtggaaca cgggaacatt ccgatgaaag
      301 accttctgtt cgcgggcgcg ctggccgccc ttctgactgt cgccgggctt tcatcgccgg
      361 ctctggcagg atccggggat gtcgtggttg ccggcgcgtg ggcgcgcgcc tcgatcggcg
      421 tcaagcgccc cggtgccgcc tacatgacga ttcgcaatac cggcgaggag ccggtgacgc
      481 tgaccgggct tgcaactccg ctggcgatga tgcccgaaat ccacgaaagc aggaccgatg
      541 cccagggcat cagttccatg acgcccgcgg gcaggatcac gattgcaccg ggggacagcg
      601 tggcgctgga acccggcggg ctgcacgcga tgctgatggg gctgcaagcg ccgatgacgg
      661 aaggcgagac ctttccgctg acgctgcttt tcgaggatgg cggccagacg atcgtcgaag
      721 tgccgatcct cggcatcgcc gcacgcggac ccggggactg atgcggcggc gggcgtttct
      781 gggatacggc gcggccggcc ttggcgcgct atcgctgacg ctggcggtcg gttggtggcg
      841 ggtggacggg cccggtgcgc ccgacgcggc gggattgcgg ccgatggccc tttccgcgat
      901 ggattttcgc ctgacagatc acgagggcaa cagcgtcgga ccgaaatccc tgatcggccg
      961 tccgacgatg gtcttcttcg gcttcaccta ttgccccgat gtctgcccga ccacgctttc
     1021 ggacatctcc ggctggctgg acgagttggg accggatggt gatgaatgga acgtggttct
     1081 tatcaccgtc gatcccgcgc gcgatacggt ccgggcgatg gccgattatc ttggctattt
     1141 ccatccggcg atccgcggct ggaccggccc ggagccgcag atcgcgcgcg ccgccgccgg
     1201 tttccgcgcg acctatgaaa gagtgccgac cgaaaacggc gattatacga tgaatcacac
     1261 ctcgggcgtc tttctgttcg atgccgaggg gcttttcgtc accatgatcg actatcacga
     1321 gccgagggaa ttcgcgatcc ccaagatccg ccgtgccatg aagaaagagg cgaaggcggc
     1381 gagctgaggc agggaatcgt gacggcgcgg aaccggccgc cccgtcttag cggtcgctcc
     1441 ggggccgccc ggcgtaccag gcggataccg cgtcgatctg ttcctctgtc atccgctcgg
     1501 cgattgcctc catcaccggg gcgaaggggg ttcctccgcg cttgccgtcg cgccaaagca
     1561 ccaattgccg ggcaagatac cactcgggct gtcccgcgag cgccggaaaa tctgggcttc
     1621 gcggcttcgg ccccagggcg tggcagcttt ggcaggacgg gatcccagcc tcggcgatgc
     1681 cgtcgagggc gatgcgccgg cccagggaca gcagcgcctc gggcgtggcg ggggggccgc
     1741 cgggggcggc catcggcac
//
LOCUS       DTVW01000836            1102 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2027930, whole
            genome shotgun sequence.
ACCESSION   DTVW01000836 DTVW01000000
VERSION     DTVW01000836.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1102)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1102)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1102
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2027930"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            486..>1102
                     /locus_tag="EYO87_10975"
     CDS             486..>1102
                     /locus_tag="EYO87_10975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008033128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2793 domain-containing protein"
                     /protein_id="HIC66499.1"
                     /translation="MRPSGRDFPLQPHFGVNRIANWSPSTGTTVTTEGLPITSVGTVS
                     TPTLAATNLAASMRRWRLTSAAVVDSVADQRSAGWACWRGNAAGLGGWTFVTRISLTT
                     LQATGMGFFGLYGSTAALATTLTLAAAINCIGIGFQRGTHANWQLVANDGTGAPTITD
                     MGASFAIATGGVVSLFIAAPPNGSSVWVRAVNEVTGAVFEQEIAA"
BASE COUNT          175 a          414 c          350 g          163 t
ORIGIN      
        1 cggccggggc gggcggcacg accgtcatca acacgccgac cgtcaccttc gccaatgccg
       61 tcacgcaggt cggcatgccg caagccaacc tgacggcgca actcttgggc ctcggcgggg
      121 cctcggccga cagctacaac cgcatctcgg tcaacacgcc tgcggtgctg ctgaacaacg
      181 caggcgcagg tatcgaagcc accgtgaata aggcctcagc cgggaacgac gccgccttcg
      241 ctttcaagag cggcttctcg gcccgcgcgc tgatcggtct cctcggcaat gacgacttca
      301 gcttcaaggt cagcccggac ggatccacgt tcttcgacgc gattcgcatc gaccgcacca
      361 acggccaggt ggaactgccg cagcccgcta tcctgcccgg cctcagcgcc gcgccgaccc
      421 cgccgcccgc cgggaaagcc gccgtctacg cccgcaaccg cgccggagcg ccgtggatcg
      481 acgtgatgcg cccctcgggc cgggacttcc cgctccagcc gcatttcggg gtgaaccgga
      541 tcgccaactg gtcgccctcg accggcacga cggtgaccac cgaaggcctg ccgatcacct
      601 cggtcggcac cgtttcgacg cccacgctgg ccgccacgaa ccttgccgcc tcgatgcggc
      661 gctggcgcct gacttcggcg gccgtcgtgg actcggtcgc cgaccagcga tccgcaggct
      721 gggcctgctg gcgcggcaac gcggcgggct tgggcggctg gaccttcgtc acgcggatct
      781 cgctgacgac gctgcaggcg accgggatgg ggttcttcgg cctctacgga tcgaccgcag
      841 cgcttgccac caccctgacg ctggccgctg ccatcaactg catcggaatc ggctttcagc
      901 gcggcaccca tgccaactgg cagctggtcg ccaatgacgg gaccggagca ccgacgatca
      961 ccgacatggg cgcgagcttc gccatcgcga ccggcggtgt cgtgagcctg ttcatcgccg
     1021 cgcccccgaa cggttcgtcg gtgtgggtcc gagccgtgaa cgaggtcacc ggcgccgtct
     1081 tcgaacagga aatcgccgcc ga
//
LOCUS       DTVW01000837            4065 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2028470, whole
            genome shotgun sequence.
ACCESSION   DTVW01000837 DTVW01000000
VERSION     DTVW01000837.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 4065)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4065)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4065
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2028470"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(4..1341)
                     /locus_tag="EYO87_10980"
     CDS             complement(4..1341)
                     /locus_tag="EYO87_10980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020042853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HIC66500.1"
                     /translation="MSRSRLYEPAAYGAAALDGCFWPGTQDDPCTYPALHGEAQADFA
                     VIGAGVTGLSAALELARSGQDVAVLDRHRPGWGASGRNGGFCCLGGAKLGRDAMIRRY
                     GEAEHRRYRTTEMAAIAHVRAVLDDHRIDADTHSRGGELQLAHRPRDWAAFQQEAGLA
                     ARDYGITPRLIPAADLPAEGAAGTGFHGGLVLPLGFALNPRKYVLGLAHAAQDHGARL
                     HADSPVLRIARRRDSYVLATPYGHLRARRLLLATNGYSAEDLPDWMRGRYLPVQSSVI
                     VTRPLTDAQIAAQGWSTDLMAFDSRSLLHYFRLLPDRRFLFGMRGGIAWTPRTHRAIR
                     HRIIADFQAMFPAWRQVGMTHFWSGLACLTRSLVPFTGPIDTWPGAFAAFGYHGNGVA
                     MGSFAGQQMARLAMDQTADLPGFFARPPPRFEGGGLRRHLLRAAYAWYAWRDR"
     gene            complement(1338..2156)
                     /locus_tag="EYO87_10985"
     CDS             complement(1338..2156)
                     /locus_tag="EYO87_10985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013964137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HIC66501.1"
                     /translation="MNRRLSWFNVTTLSLGFAFLYLPMLILIIYSFNASKLVTVWAGF
                     STQWYVSLMGNQQFLDAAWVTLRVAFFSSTLATVLGTMAAYVLVRAGRFPGRTLFSGM
                     IYAPLVMPDVITGLSLLLLFIAINLDRGIFTIVLAHTTFSMCYVSVVVSSRLMTFDRS
                     LEEAALDLGCTPFDAFRSVTLPIITPAVISGWLLAFTLSLDDLVIASFTAGPSSTTLP
                     IRIFSSVRLGVSPEINALSTIMISIVAVGVVSASLVSKRAIIRQRQEELAGVRA"
     gene            complement(2153..3043)
                     /locus_tag="EYO87_10990"
     CDS             complement(2153..3043)
                     /locus_tag="EYO87_10990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008559599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HIC66502.1"
                     /translation="MRRLLLIAIPYLWLLGLFLVPFLIVLKISLSDTAVAIPPYTPTL
                     DLSGGWASIKEFFGQLDFENFIWLTQDELYWRSYLSSLQIAAVSTFITLLVGYPVAYG
                     MAQSPDEWRPTLMMLVILPFWTSFLIRVYAWIGILANEGFLNQFLLWAGIIDTPLQIM
                     NTTTAVYIGIVYTYLPFMILPIYATLEKMDGALIEAAEDLGCSRLSAFWLVTLPLSRP
                     GIIAGCFLVFIPVIGEFVIPSLLGGSRTLMIGKVLWEEFFSNRDWPVASAVAVVLLIL
                     LIVPIVLFQRNQQRQQEASQ"
     gene            complement(3060..>4065)
                     /locus_tag="EYO87_10995"
     CDS             complement(3060..>4065)
                     /locus_tag="EYO87_10995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008560895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIC66503.1"
                     /translation="YRKEFFALLGPSGCGKTTLMRMLAGFETPSEGKITVDDVDVGPI
                     PPNKRPVNMMFQSYALFPHLTVEDNIAFGLKRSKMSRDEITARVTEMLRLTRLEKFAR
                     RKPHQISGGQRQRVALARSLAKAPKLLLLDEPLGALDRKLREDTQFELMDIQEKTGTT
                     FVIVTHDQEEAMTVASRVAVMDHGRIVQVDTPAGIYETPNSVYVADFIGDVNIIEGNA
                     SPAGEGRVSIHYAEGAQPIIAAADHIPDGQRVSFAIRPEKIVVGTEPDPDRTNQVRGR
                     IVDIGYLGNVSTYHLELPGGQKFSAQMTNARRLARRDFTWDDEVWLSWTETAGVVLTE
                     "
BASE COUNT          790 a         1300 c         1368 g          607 t
ORIGIN      
        1 atttcagcgg tcgcgccagg cataccacgc ataggccgcg cgcagcaggt ggcggcgcag
       61 gccgccaccc tcgaaccggg gcggaggacg ggcgaaaaag ccgggcagat ccgcggtctg
      121 gtccatcgcc agccgggcca tctgctgccc ggcgaagctg cccatcgcga cgccgttgcc
      181 gtgatagccg aaggccgcaa aggcgcccgg ccaggtgtcg atggggccgg tgaagggcac
      241 caggctgcgg gtcaggcagg cgaggccgga ccagaaatgc gtcatcccga cctgacgcca
      301 ggccgggaac atggcctgga aatccgcgat gatccggtgg cggatggcgc gatgggtgcg
      361 gggcgtccag gcaatgccgc cgcgcatccc gaacaggaac cggcggtcgg gcagcaggcg
      421 gaagtaatgc agcaggctgc ggctgtcgaa ggccatcaga tcggtgctcc agccctgcgc
      481 ggcgatctgg gcatcggtca gcggccgcgt cacgatcacc gaggactgca ccggcagata
      541 gcggccgcgc atccagtccg gcaggtcttc cgcggaatag ccgttcgtgg ccagcagcag
      601 ccggcgcgcg cgcaggtgtc cgtatggcgt ggccagcaca taactgtccc gccgccgcgc
      661 gatccgcaga accgggctgt cggcgtgaag gcgcgcgccg tgatcctgcg cggcatgggc
      721 caggcccagc acatatttcc gcgggttcag cgcaaagccc aggggcagca ccaaaccgcc
      781 gtgaaagccc gtgcccgcgg cgccctcggc gggcagatcg gcggcgggga tcaggcgcgg
      841 cgtgatgcca taatcgcgcg cggccagccc ggcctcttgc tgaaacgcgg cccagtcgcg
      901 cgggcgatgc gccagttgca actcgccacc ccgcgaatgg gtgtcggcgt cgatgcggtg
      961 atcgtccaga accgcgcgga catgggcgat ggcggccatc tcggtggtgc gataacggcg
     1021 gtgctcggcc tcgccatagc ggcggatcat cgcgtcacgg cccagctttg cgccgccgag
     1081 gcagcagaag ccgccattgc ggcccgaggc gccccagccg ggccggtgcc ggtccagcac
     1141 cgccacatcc tgccccgacc gggccagttc cagcgccgcc gacagcccgg tgacgcctgc
     1201 cccgatcacc gcgaaatcgg cctgggcctc gccgtgcagg gccggatagg tgcacggatc
     1261 atcctgcgtg ccgggccaga aacagccgtc cagggcggcc gcgccgtagg ctgcgggttc
     1321 atagaggcgc gaccgactca tgcacgcacg ccggccagtt cctcttgccg ctgacggatg
     1381 atggcgcgct ttgacaccag cgaggccgag acgacgccca cggccacgat ggagatcatg
     1441 atcgtggaca gggcgttgat ttcggggctg acgccaaggc ggaccgagga aaagatgcgg
     1501 atcggcagcg tggtcgagga cgggccggcg gtgaacgagg cgatcaccag atcgtccagc
     1561 gacagggtga aggccagaag ccagcccgag atcaccgccg gcgtgatgat cggcagcgtc
     1621 accgaccgga aggcgtcgaa gggcgtgcag cccagatcca gcgcggcctc ttccagcgaa
     1681 cggtcgaagg tcatcagccg cgacgagacg acgaccgaga catagcacat ggaaaacgtc
     1741 gtatgcgcca ggacgatggt gaagatgccg cggtcaaggt tgatggcgat gaacagcagc
     1801 agcagcgaaa ggccggtgat cacgtcgggc atgaccagtg gcgcgtagat catgccggaa
     1861 aatagcgtcc gccccggaaa gcgccccgcc cggaccagca cataggccgc catcgtgccc
     1921 agaaccgtcg ccagcgtcga cgagaagaag gcgacccgca gcgtcaccca agccgcgtcc
     1981 aggaactgct ggttgcccat cagagagaca taccactgcg tcgagaagcc cgcccagacc
     2041 gtgaccagct tcgaggcgtt gaagctgtag atgatcagga tcagcatcgg cagatacagg
     2101 aaggcgaagc ccaggctcag cgtggtgacg ttgaaccagc tcaggcggcg attcattggc
     2161 tggcctcctg ctggcgctgc tggttgcgct ggaacagcac gatgggaacg atcagcagaa
     2221 tcagcaggac caccgcgacc gcagaggcca ccggccagtc gcggttcgag aagaattcct
     2281 cccacaggac cttgccgatc atcagcgtgc gcgagccgcc cagcagcgag ggaatcacga
     2341 attcgcctat gaccgggatg aagaccagaa aacagcccgc gatgatgccc ggccgcgaca
     2401 gcggcagcgt caccagccag aaggccgaca gccgcgaaca gcccagatcc tcggccgcct
     2461 cgatcagggc gccgtccatc ttttccagcg tggcgtagat cggcaggatc atgaagggca
     2521 ggtaggtata gacgatgccg atatagacgg ccgtcgtcgt gttcatgatc tggagcggcg
     2581 tgtcgatgat gccggcccag agcaggaact ggttcaggaa cccctcattc gcaaggatcc
     2641 cgatccacgc atagacccgg atcaggaacg aggtccagaa gggcaggatc accagcatca
     2701 tcagcgtggg ccgccattcg tcgggacttt gcgccatgcc gtaggcgacg ggatagccga
     2761 ccagcagcgt gatgaaggtc gagacggccg cgatctgcaa gctggacaga taggaccgcc
     2821 aatacaattc gtcctgggtc agccagatga aattctcgaa atcgagctgg ccgaagaatt
     2881 ccttgatcga cgcccagccg cccgacagat ccagcgtcgg cgtgtagggc ggaatcgcca
     2941 ccgccgtatc cgaaagcgag attttcagca cgatcaggaa tggcaccagg aacagcccca
     3001 gcagccacag atagggaatc gcgatcagca acaggcggcg caggttcatg actgcctccc
     3061 tattcggtca ggacgacgcc ggcggtctcg gtccaggaca gccagacctc gtcgtcccag
     3121 gtaaagtcgc gccgcgccag gcgtcgcgca ttggtcatct gggccgagaa tttctgcccg
     3181 cccggcaatt ccaggtgata ggtcgagaca ttgccgagat agccgatatc gacgatcctg
     3241 ccgcgaacct gattggtgcg gtcgggatcg ggttcggttc ccacgacgat cttttccggc
     3301 cggatcgcga aggagacgcg ctgtccgtcc gggatgtggt cggctgcggc gatgatcggc
     3361 tgcgcgcctt cggcgtagtg gatcgacacc cggccctcgc cggcaggcga ggcattgccc
     3421 tcgatgatgt tcacatcgcc gatgaaatcc gcgacataga cgctgttcgg ggtctcgtag
     3481 atgccggcgg gcgtgtccac ctggacgatg cgcccgtgat ccatgaccgc gacgcggctg
     3541 gcgaccgtca tcgcctcttc ctgatcgtgg gtgacgatga cgaaggtcgt gccggtcttt
     3601 tcctgaatgt ccatcagctc gaactgcgta tcttcgcgca gcttgcggtc cagggcgccc
     3661 agcggttcgt ccagcagcaa cagcttgggc gccttggcca gcgaccgggc cagcgccacc
     3721 cgctgccgct gtccgccgga aatctggtgc ggcttgcgtc tggcgaattt ctcgagccgg
     3781 gtcaggcgca gcatctcggt cacgcgcgcg gtaatctcgt cccgcgacat cttcgatcgt
     3841 ttcagcccga aggcgatgtt gtcctcgacc gtcagatggg gaaacagcgc atagctttgg
     3901 aacatcatgt tcaccggccg cttgttgggc gggatcggcc cgacatcgac atcatcgacg
     3961 gtgatcttgc cttcgctggg cgtctcgaac cctgccagca tccgcatcag cgtggtcttg
     4021 ccgcagcccg aggggccgag aagggcgaag aattccttgc ggtag
//
LOCUS       DTVW01000838            3411 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2029235, whole
            genome shotgun sequence.
ACCESSION   DTVW01000838 DTVW01000000
VERSION     DTVW01000838.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3411)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3411)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3411
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2029235"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..211)
                     /locus_tag="EYO87_11000"
     CDS             complement(<1..211)
                     /locus_tag="EYO87_11000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66504.1"
                     /translation="MAAPIFFHISPEWCGDARLVRLFRRNGHRAAMGENGDLAARILL
                     AEAEGRVPFSGRDDIRLFAGLWRNDP"
     gene            complement(211..1419)
                     /locus_tag="EYO87_11005"
     CDS             complement(211..1419)
                     /locus_tag="EYO87_11005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013066232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HIC66505.1"
                     /translation="MSVGDNLPATGRPLAGPARTTWPILMAISLSHMINDVMQSMLAA
                     IYPLLRVEFSLSYAQIGIMSFAFQVTASLLQPLIGIVTDRHPQPRSLSLGMASTFCGV
                     LLLAFASSYGMLLAGAMMIGIGSAVFHPESSRVARLASGGRFGTAQSLFQLGGNSGQS
                     LGPLLAAFIVVPLGRPAVAWFAVAAALGIALLWRVGDWAEGRRRATAAQVDRALRLPR
                     DMVFRSIAVLAILVFTKNIYTAAMTSYFTFFTIEKFGLSTQAAQIMLFLFLGGMAAGV
                     MLGGVVGDRVGPLRVIWFSILGVLPFTLLLPHVGLVPTGILAVLIGLILASAFPAIVV
                     YAQELVPGRTGMIAGLFFGFSFGMGGIAAAGLGVLADARGIETVFLLCSFLPILGCLT
                     ILLPRRLTGG"
     gene            1642..2400
                     /locus_tag="EYO87_11010"
     CDS             1642..2400
                     /locus_tag="EYO87_11010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010399347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UTRA domain-containing protein"
                     /protein_id="HIC66506.1"
                     /translation="MTKLPPTFVRSLRPGGSARAPKRMNTWQSVRAEVLERIRSGEWA
                     PGTLIPTEHQLAHQLGCARATVNRALRELAESGVVERRRKVGTRVTATPHQRTTLEMP
                     VIRSEIEAAGAVYRYVLTAFERGPIPSEAALRALQVEASQNLLLVKAQYLADGAPHCC
                     EAIWLNPRALPPLTRADLEGQSAPEWLARHVPLTRGRVTILAEGASGDCAHNLWIEPG
                     TPILAIERTNWRNATPVSFSRQFYPPQHRLVSED"
     gene            complement(2397..>3411)
                     /locus_tag="EYO87_11015"
     CDS             complement(2397..>3411)
                     /locus_tag="EYO87_11015"
                     /inference="COORDINATES: protein motif:HMM:PF06808.10"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TRAP transporter large permease"
                     /protein_id="HIC66507.1"
                     /translation="PALAAVLGCGGFAAISGSSTACASTMGRICVPEMLRLGYDPKLA
                     AASVAAGGTLGSLIPPSILFVLFGILTDRPIAPLFMAGILPGLLSLAGMIAVVAWWVR
                     SDPGAAPDVPRTTATPLDATFAAWPAILIFAVIVFGIFSRALTVAQAVAISVALTLAI
                     GVAQTRLTWGAVWRACRESLIESVSILLVLAGAWLFADFATQSGMAEAFSMSVAQLDP
                     SYLMLMLAIALIYLIMGMFLDPLAILVLTLPFLARLVADYDLNPVWLGVVIVKLLEIG
                     LITPPVGLNVYIIAGVTRDMGIDRIFAGIGRFLAVDLLVLTILILFPAVSLLIPTAMG
                     AVP"
BASE COUNT          689 a         1160 c         1114 g          448 t
ORIGIN      
        1 aggggtcgtt gcgccacaga cccgcgaaca ggcggatgtc gtcgcgaccc gagaacggca
       61 cccgaccctc ggcctcggcc agcaggatcc gggcggcaag gtcgccgttc tcgcccatcg
      121 cggcgcggtg gccgttgcgg cggaacaggc gcaccagccg cgcgtcaccg caccattccg
      181 gactgatatg gaagaagatc ggggccgcca tcagcccccg gtcagccggc gcggcagcag
      241 gatcgtcagg cagcccagga tcggcaggaa cgagcagagc aggaacaccg tctcgatccc
      301 cctcgcgtcg gccagcaccc ccagcccggc ggccgcgatg ccgcccatgc cgaaggaaaa
      361 gccgaagaac agccccgcga tcatgcctgt gcggccgggc accagttcct gcgcatagac
      421 cacgatggcc ggaaatgccg aggccaggat cagcccgatc agcactgcca gaatacctgt
      481 cggcaccagt ccgacatgcg gcaaaagcag cgtgaagggc agaacgccga ggatcgagaa
      541 ccagatcacg cgcaacggtc ccacgcggtc cccgacgacg ccgcccagca tgacccctgc
      601 cgccatgccg ccgaggaaca ggaacagcat gatctgtgcc gcctgcgtgg acaggccgaa
      661 cttctcgatg gtgaagaagg tgaaatagct ggtcatggcg gcggtgtaga tattcttggt
      721 gaagacaaga atggccagaa ccgcgatcga acggaagacc atatcgcgcg gcagccgcag
      781 cgcgcggtcg acctgtgccg ccgtggcccg gcgccgcccc tcggcccagt cgccgacacg
      841 ccacaacagc gcgatgccaa gcgccgcggc gaccgcaaac catgccaccg ccggtcggcc
      901 cagcggcacg acgatgaagg ccgccagcaa cggccccagc gattgtccgg aattgccgcc
      961 aagctggaac agcgattgcg cggtcccgaa ccgcccgccc gaagccagcc gcgccacccg
     1021 cgagctttcg ggatggaaca cggccgatcc gatgccgatc atcatcgcgc ccgccagcag
     1081 catcccgtag ctgcttgcaa aagccagcag cagcacgccg cagaaggtcg aggccattcc
     1141 cagcgacagc gatcttggct gcggatgacg gtcggtcacg ataccgatca gcggctgcag
     1201 cagcgaggcc gtgacctgga aggcaaagga catgatcccg atctgcgcgt agctcagcga
     1261 gaattcgacc cgcagcagcg gatagatcgc ggccagcatc gactgcatca cgtcgttgat
     1321 catgtgagac aggctgatcg ccatcaggat cggccacgtc gtccgggccg ggccggccag
     1381 cgggcggccg gtcgcaggca ggttgtcacc gacgctcatg gcgcgctgtc ctccgatcgc
     1441 ttgcagatga tgaaatatca ttcgcggagc ggcttggaaa tccccggccg gcacaacctg
     1501 gacgcggggg attcgtgttg gaaaacaagc tggaacagcc aagctccagc tgcgtcaact
     1561 atgccgatat cgacaggttt ccttccgggc cgcgcggatt gacactattg gcatgtgctt
     1621 ttcgccggtt tcaggtttca gatgacaaaa cttccaccga ccttcgtccg ttcattgcgt
     1681 cccggcggct cggccagggc gcccaaacgg atgaacacct ggcaatccgt ccgtgccgag
     1741 gtgctggagc ggatccggtc gggcgaatgg gcgccgggca cgctgatccc gacggaacac
     1801 cagcttgcgc atcaattggg ctgcgcccgc gcgacggtga accgcgcgtt gcgcgaactg
     1861 gccgaaagcg gcgtggtcga acgccgccgc aaggtcggga cccgtgtcac ggccacgccg
     1921 catcagcgca cgacgctgga aatgccggtc atccgcagcg agatcgaggc agccggcgcg
     1981 gtttatcgct atgtcctgac cgcgttcgag cgggggccga tcccctcgga ggcggcgctg
     2041 cgcgcactgc aggtcgaggc aagccagaat ctgctgctgg tcaaggcgca atatctggcc
     2101 gatggcgcgc cgcattgctg cgaggcgatc tggctgaacc cccgcgccct gccccccctg
     2161 acgcgcgccg atctcgaggg ccagtcggca cccgaatggc tggcccggca cgtgcccctg
     2221 acgcgcggca gggtgacgat cctggccgag ggcgccagcg gcgactgtgc ccacaatctg
     2281 tggatcgagc cgggaacgcc gatcctcgcg atcgagcgga cgaactggcg caacgcgacc
     2341 ccggtctcgt tctcgcggca gttctacccg ccgcagcacc ggctggtttc cgaggattag
     2401 ggcacggcgc ccatcgccgt cgggatcagc agcgagaccg cgggaaacag gatcaggatc
     2461 gtcaggacca gaaggtccac ggccaggaac cgcccgatcc cggcgaaaat gcggtcgata
     2521 cccatgtcgc gtgtcactcc ggcgataata tagacgttca gcccgaccgg cggcgtgatc
     2581 agcccgattt ccagcagctt gacgatgacc acgcccagcc agaccggatt caggtcgtaa
     2641 tccgcgacca gccgggccag gaagggcagc gtcaggacca ggatggccag cggatccaga
     2701 aacatcccca tgatcagata gatcagagca atcgccagca tcagcatcag atacgaggga
     2761 tcaagctgcg cgaccgacat cgaaaaggcc tcggccatgc cgctttgcgt ggcgaaatcg
     2821 gcaaacagcc aggcacccgc caggaccagc aggatcgata cgctttcgat caggctttcc
     2881 cggcaggcgc gccatacagc gccccaggtc agccgagtct gcgcgacacc gatggcaagc
     2941 gtcagcgcga ccgagatcgc gacggcctgc gccaccgtca gcgcccggct gaagatgccg
     3001 aagacgatca cggcaaagat caggatcgcg ggccatgcgg cgaaggtggc gtccagcggc
     3061 gtcgcggtcg tgcgcgggac atcgggcgcg gcgcccggat cgcttcgcac ccaccatgcg
     3121 acgaccgcga tcatgcccgc cagcgacagc aggccgggca ggatgcccgc catgaacagc
     3181 ggcgcgatgg gcctgtcggt caggatgccg aacaggacga acaggatcga cggcgggatc
     3241 agcgagccca gcgtgccgcc cgctgccacc gatgcggcgg ccagtttcgg gtcataaccc
     3301 aggcgcagca tctcgggcac gcaaatccgg cccatggtcg aggcgcaggc ggtcgacgat
     3361 ccggaaatgg ccgcgaaacc gccgcaaccc agcacggcgg ccagcgccgg g
//
LOCUS       DTVW01000839            4197 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2035963, whole
            genome shotgun sequence.
ACCESSION   DTVW01000839 DTVW01000000
VERSION     DTVW01000839.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 4197)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4197)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4197
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2035963"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(904..1392)
                     /locus_tag="EYO87_11020"
     CDS             complement(904..1392)
                     /locus_tag="EYO87_11020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66508.1"
                     /translation="MDHPRKTGGLAALALALALPVAGWSQDAAPAPEDGQPRAAGTAA
                     SGAQPEGNGTGGNLATTGTAAKSASRECDNAAGKAVPATQPQPDDDGMSPANSGSTGW
                     SGGTGGSQIGTNAQGGLPGSKTWHAPTARGLDLSGRPEPADLPQDGPKPEAADLAGLP
                     DC"
     gene            1551..2885
                     /locus_tag="EYO87_11025"
     CDS             1551..2885
                     /locus_tag="EYO87_11025"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_353217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trigger factor"
                     /protein_id="HIC66509.1"
                     /translation="MQVKETRNEGLKRGYQFTLPAADLAATVDAKLKEAQPEIEMKGF
                     RKGKVPMAMLKKQFGPRILGDAMQEAIDGALRKHLEETGDRPAAQPAVEMENGENWKE
                     GDDVVVNVSYETLPAIPEIDMTGLKLEKLSVPAEEEAVNEALENLAKSAQDFDDRRKG
                     SKAKDGDQVVIDFKGFVDGEAFEGGEAADYPLVLGSNSFIPGFEEQLVGAKVDEDVTV
                     KVTFPQEYGAKHLAGKEATFECKVKAVKAPKAAEIDDELAKKFGAEDLDGLKKQISER
                     LETEYAGAARAVMKRSLLDQLDDQVKFELPESLVEAEANQIAHQLWHEEHPEEQGHDH
                     GAIEPTDEHRKLAERRVRLGLLLAEIGQKAEVSVTDQEMTQAVLQAARQYPGQERAFF
                     EFVQQNQNMQQQLRAPIFEDKVVDHIAEKAQVEEKKISKQELEKAVEALDEL"
     gene            3020..3598
                     /locus_tag="EYO87_11030"
     CDS             3020..3598
                     /locus_tag="EYO87_11030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003610959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase"
                     /protein_id="HIC66510.1"
                     /translation="MPRDKLGRHVILSGCSGGGKSTLLAELARRGFPVVPEPGRRIVA
                     QEKPGHGSALPWVDPEAFARRAIEMALEDRRGLRSVTGWLFFDRGLIDAAVALEHAAG
                     TPLGETLGGRGRFHQQVFLTPPWPEIYRTDDARRHDMQDAIDEYHRLVDAFGRLGYDT
                     IVLPGTDVEARADFVLAHLASRQGSSPAIGST"
     gene            3671..4093
                     /locus_tag="EYO87_11035"
     CDS             3671..4093
                     /locus_tag="EYO87_11035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005855311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1489 family protein"
                     /protein_id="HIC66511.1"
                     /translation="MPAPLNLMKLCVGADGPEDLLHWQKQRFHEAPAIHVTRMWPRRE
                     AELLDGGSIYWVFKGVMLARQRLLRLDERLGQDGIRRCALVLDRDLVRVAAVPRRPFQ
                     GWRYLKGDEAPADLPADRASEDPLPPDIAAALAAVGLV"
BASE COUNT          738 a         1347 c         1414 g          698 t
ORIGIN      
        1 gccgacctgc ccgccgaggc gcccattgtc gtgatgatcc acggctaccg ctattcgccc
       61 tcgcagccgg cccatgatcc ccatcgtcac atcctgtcgc tcgatcccga tccgcggcag
      121 cggcgggcga catcctggcc gcgggctctg ggattcggcg gcgtccatcc ccaggacgga
      181 ctggccatcg cctttggctg ggaagcgcgg ggcaccctgc gcggggccta tcgccgggcg
      241 ggccttgccg ggcggtcgct gtcggggctg gtagaccggc tggcgcatgc ctcgggtcgg
      301 cctgtggccg tcatcagcca ttccctgggc gcgcgcgtcg cgctgaccgc cctgcgcgag
      361 gcggtttgcg gcacgatcgg gcggatgatc cttctgaccg gagccgaatt tcgcgacgaa
      421 gccgcgcggg ccctggcctc ggccgccggt cggcaggccg aagtgatcaa catcacctcg
      481 cgcgagaacg accttttcga cttcgcgctg gaacaatggc tgtcgctggg ccgcaggcag
      541 gctttgggtt tcgggctgaa ccggccgacg cggaactggg tcgatatgca gatcgacgag
      601 ggcgaaacgc ttgcggcgct ggagcgcctt ggatttccga ccgaacgtca tccgcgccga
      661 ttgtcccact ggacgcccta tctgcggcgc ggattgttcg atttctaccg gaccgccctg
      721 ttccagccat gggcgctgcc gatggggctg ctgcacgcgc gccttcccgg acgaatcgag
      781 ccgcgctggt cgcggctttt gtcccggccc ggccagatgg gcgccgcagc cgcaaaggcg
      841 gatgtcaggc tgcacgccgg ctgacagaaa aattccggca gggccggtcc cgccgccttt
      901 atctcagcaa tcgggcagtc ccgccagatc ggctgcttcg ggtttcggcc cgtcctgagg
      961 caggtcggcc ggttcaggcc gtccggaaag atccagtccg cgcgcggtcg gcgcgtgcca
     1021 ggtcttcgat cccggcagcc caccctgagc attggtgccg atctgcgaac cgccggttcc
     1081 cccgctccaa ccggtgctgc cggaattggc cggagacatg ccgtcatcgt ccggttgcgg
     1141 ctgggtcgct ggcactgcct tgccggctgc gttgtcgcat tcgcggctgg cggatttggc
     1201 agcggtgccg gtcgtggcaa gatttccgcc ggtcccgttc ccctccggct gcgcaccgct
     1261 cgccgcagtt ccggcagcgc gcggctggcc gtcttcgggc gcgggggctg catcttgcga
     1321 ccagcctgca accggcaatg ccagagccag ggccagggcg gccaatccgc cggtctttcg
     1381 aggatgatcc atgaggttga tcccgttcgc gttccaaggc gtcgattggg aacgcgcttg
     1441 ggcgccggcg gttccgcaat ctgcttgcag acccccgccc ccacgactag aagggcggaa
     1501 attttcaggt cgccctgctt ctggcggccc ttctggatat gaggacgatg atgcaggtca
     1561 aggaaacccg gaacgaaggt ctgaagcggg gctaccagtt caccctgccc gccgccgacc
     1621 tggccgcgac ggtcgatgcc aagctgaaag aggcgcagcc cgagatcgag atgaagggct
     1681 ttcgcaaggg caaggtgccg atggcgatgc tgaagaagca attcggcccg cgcatccttg
     1741 gcgacgccat gcaggaggcc atcgatggcg ccctgcgcaa gcatctggag gaaaccggcg
     1801 atcgccccgc cgcccagccc gccgtcgaga tggagaacgg cgagaactgg aaggaaggcg
     1861 acgatgtggt tgtcaatgtc agctacgaaa ccctgcccgc catccccgaa attgacatga
     1921 ccgggctgaa gctggaaaag ctgagcgtcc cggccgagga agaagcagtg aacgaggcgc
     1981 tggagaacct ggcgaaatcg gcccaggatt tcgacgaccg ccgcaagggc agcaaggcca
     2041 aggacggcga tcaggtcgtg atcgacttca agggctttgt cgatggcgag gcgttcgagg
     2101 gcggagaggc cgcggattac ccgttggtcc tgggctcgaa cagcttcatt ccgggcttcg
     2161 aagaacaact ggtcggcgcc aaggtcgatg aggatgtcac ggtgaaggtc accttcccgc
     2221 aggaatacgg ggccaagcat ctggccggca aggaagcgac cttcgaatgc aaggtgaagg
     2281 cggtcaaggc gccgaaagcc gccgagatcg acgacgaact ggccaagaaa ttcggcgccg
     2341 aggatctgga cggcctgaaa aagcagatct cggaacggct ggaaaccgaa tatgccggtg
     2401 ccgcccgcgc ggtgatgaag cggtctctgc tggatcagct ggacgatcag gtcaaattcg
     2461 agctgccgga atcgctggtc gaggccgagg ccaaccagat cgctcaccaa ttgtggcacg
     2521 aagaacatcc cgaggagcaa ggccacgatc acggcgccat cgagcccaca gacgagcacc
     2581 ggaaactggc cgagcgccgg gtgcgtctgg gcctgcttct ggccgagatc gggcagaagg
     2641 ccgaagtcag cgtgaccgat caggaaatga cccaggccgt cttgcaggcg gcgcgtcaat
     2701 atccgggtca ggaacgggcc ttcttcgaat tcgtgcagca gaaccagaac atgcagcagc
     2761 agttgcgcgc cccgatcttc gaggacaagg ttgtcgatca catcgccgaa aaggcgcagg
     2821 tcgaggaaaa gaaaatcagc aagcaggaac tggaaaaggc cgtcgaggcg ctggacgagc
     2881 tctgatccgc ttgtgatgaa cgaatcctga aagccgcggc cgatgtcgcg gctttttgct
     2941 gtcgcgccat gcgtgcccgg ctctgagaga cgacgccatt cttgaacctg aactgcattt
     3001 cgcggccaag gaagacccga tgccacgcga caaacttggc cggcacgtca tcctttcagg
     3061 ctgttcgggc ggcggaaaat cgacgcttct cgccgaactg gcacggcggg gattccccgt
     3121 cgtgcccgag cccggcagac ggatcgtcgc ccaagagaag cccggccatg gcagcgcgct
     3181 tccctgggtc gatccggaag ccttcgcgcg cagggctatc gagatggcgc tcgaggaccg
     3241 gcggggtctg cgtagcgtca ccggctggct ctttttcgat cgcgggctga tcgatgcggc
     3301 cgtcgcgctg gaacacgcgg ctgggacacc gcttggcgag acgctcggcg ggcgggggcg
     3361 ttttcaccag caggtttttc tgaccccgcc ctggccggaa atctaccgga cagatgacgc
     3421 gcggcggcac gacatgcagg acgctatcga tgagtatcac cgcctggtcg atgctttcgg
     3481 gcggcttgga tacgatacca tcgtcctgcc aggaaccgat gtcgaggcgc gggcggattt
     3541 cgtcctggcg catcttgcca gccggcaagg ttcgtcaccc gcgatcggca gtacctgacg
     3601 tcgcccgctt tggccaacgg acaggaccga tccgcttgcg gcgcgtcttc ggcccaccta
     3661 tcttgcggac atgccagccc cgctcaacct gatgaaactc tgcgtcggcg ccgacggccc
     3721 cgaggatctg ctgcactggc agaagcagcg tttccacgag gcgccggcca ttcacgtcac
     3781 ccgcatgtgg cccagacgcg aggcggaact gctggacgga ggctcgattt actgggtgtt
     3841 caagggcgtc atgctggccc gccagcggct tttgcggctg gacgaaaggc tgggccagga
     3901 cggcatccgc cgctgcgcgc tggtgctgga ccgcgatctg gtgcgcgtcg ccgccgtgcc
     3961 gcgccgcccg ttccagggct ggcgctatct gaagggcgac gaggcccctg ccgatctgcc
     4021 tgccgaccgc gcatccgagg atccgctgcc gcccgacatc gccgcggccc tcgcggccgt
     4081 cgggctggtc tgacagcctt gacggcgccg cgaccaacgg ctaatcgaaa cgccacgcgg
     4141 gtgtagctca atggcagagc agaagcttcc caagcttacg acgggggttc gattccc
//
LOCUS       DTVW01000840            1305 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2037320, whole
            genome shotgun sequence.
ACCESSION   DTVW01000840 DTVW01000000
VERSION     DTVW01000840.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1305)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1305)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1305
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2037320"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..980
                     /locus_tag="EYO87_11040"
     CDS             <1..980
                     /locus_tag="EYO87_11040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011750358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="GHKL domain-containing protein"
                     /protein_id="HIC66512.1"
                     /translation="ALLSEAVPEFAPLFDRLSASVAEAVQDEVRLAREGRIESLLVRM
                     AVRRGADGNLEGYVVAFDDVTELVSAQRMAAWGDVARRVAHEIKNPLTPIQLSAERLR
                     RKFTPLAAPEDKAALDQYVEVIIRQTSDLRRIVDEFSRFARMPEPDRAETDLAALLRE
                     VVLLQQDALGGALEVSIPDQPVVVDCDPGMLRQALTNLLKNAGEAVEERATTAPRGWT
                     AHIAVTLRADADMVAIAIADNGPGLPADRSRLFEPYVTLKAQGTGLGLPIVKKIVEEH
                     GGSLSLTDAPDHPGAVAEIRLPRERHPVRGTGRKGRDKETRETDEAGTI"
     gene            977..>1305
                     /locus_tag="EYO87_11045"
     CDS             977..>1305
                     /locus_tag="EYO87_11045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HIC66513.1"
                     /translation="MSDILIVDDERDIRELIADILRDEGFETRLAANSDEAVGALNAA
                     EPALMILDIWLKDSRMDGIDILKQVRRNNPDVPVIIISGHGNIEIAVAAIRQGAYDFI
                     EKPFNID"
BASE COUNT          243 a          410 c          453 g          199 t
ORIGIN      
        1 acgcgctctt gtccgaggcg gtgccggaat tcgcgccgct gttcgaccgg ttgtcggcat
       61 cggtggccga ggccgtgcag gacgaggtcc ggctggcgcg cgaggggcgc atcgaaagcc
      121 tgctggtccg catggcggtg cggcgcggag ccgacggcaa tctggaaggc tatgtcgtgg
      181 ccttcgatga cgtgactgaa ctggtcagcg cgcagcgcat ggccgcctgg ggtgacgtgg
      241 cccggcgcgt ggcccacgag atcaagaacc cgctgacccc gatccagctt tcggccgaac
      301 gcctgcggcg caagttcaca ccgctcgcgg cccccgagga caaggccgcg ctggatcagt
      361 atgtcgaggt gatcatccgc cagaccagcg atctgcgccg gatcgtggac gaattcagcc
      421 gcttcgcgcg gatgcccgaa ccagaccggg cggagacgga tctggcggcg cttctgcgcg
      481 aggtcgtgct gctgcagcag gacgcgcttg gcggcgcact ggaggtcagc atccccgatc
      541 agccggtggt cgtggattgc gatcccggaa tgttgcgtca ggcgctgacg aatcttctga
      601 agaatgccgg cgaggcggtc gaggaacgcg caacgaccgc gccccggggc tggaccgcgc
      661 atatcgcggt caccttgcgc gccgatgccg acatggttgc gatcgcgatc gccgataacg
      721 gccccggcct gcccgccgat cggtcgcgcc tgttcgaacc ctatgtgacg ctgaaggcgc
      781 agggaaccgg gcttggcctg cccatcgtga agaagatcgt cgaggaacat ggcggcagcc
      841 tgtcgctgac ggatgcgccc gatcatccgg gcgcggttgc cgaaatccgg ctgccgcgcg
      901 aacggcaccc ggttcgcggc acggggcgca agggccgcga caaggaaacc agagaaactg
      961 acgaggcggg aacgatatga gcgacattct gatcgtcgac gacgaacgcg acattcgcga
     1021 actgatcgcg gacatcctga gggacgaggg cttcgagaca cgtctcgcgg caaattcaga
     1081 cgaggccgtc ggcgcgctga acgccgccga acccgcgctg atgatcctcg atatctggct
     1141 caaggacagc cggatggacg ggatcgacat cctgaaacag gtccggcgca acaacccgga
     1201 cgtgccggtc atcatcatct cgggacacgg caatatcgag atcgcggtgg ccgcgatccg
     1261 gcagggcgcc tatgatttca tcgagaagcc gttcaacatc gacca
//
LOCUS       DTVW01000841            1680 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2038002, whole
            genome shotgun sequence.
ACCESSION   DTVW01000841 DTVW01000000
VERSION     DTVW01000841.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1680)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1680)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1680
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2038002"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            511..>1680
                     /locus_tag="EYO87_11050"
     CDS             511..>1680
                     /locus_tag="EYO87_11050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010393183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinoprotein"
                     /protein_id="HIC66514.1"
                     /translation="MALAAALSLAACQREIILPGERLDPLAVTSPDGPAVQGPAPVTS
                     TALSLAPPRLNSEWTHRGGNAAHQPGHVALGGGTSRVWTADIGEGNDRRHRIAADPIV
                     GGGRVFTLDSRARVTATALSGGRAWSTDVTPALENRDSASGGGLAYEGGRVYVTTGFG
                     ELVALDATSGAVLWRQRVGAPIGGGPAVANGVVYVAARDNVGWAVRAADGKVLWQTSG
                     IVSEAGVMGVSVPAVQGDTVVFPFSSGQLTAADTQTGATRWNAQIAGTRTGRAIAVIR
                     DVTGDPVISDGTVYGGTSSGRIDAVDLGSGIQDWSAKDGANSPVAVAGGSVFAVTDEA
                     DLVRLDAATGGVIWRVDLPYYTDSRVKKQDRIYSHFGPVLAGGRLFVASSDGVLRA"
BASE COUNT          245 a          574 c          611 g          250 t
ORIGIN      
        1 agccgcaagg cgctggcggc gctgctggcc gcgggcgcct gggccgagaa cggtggcaat
       61 gatgccgcgg ccgaggcctt gcgcaatgcg gcaggcgaca atgcgggcga cagcgtgctg
      121 ggcgatctgg ccgatctgaa actggtcatg atggcggggc aggacatgga ccccgccatc
      181 cgcgaccaga tcctgtcgcg gctgtcgcgg gcaggggcgc cgttcgaatt gctggcgctg
      241 gaacagaagg ccgtggcgct gatcgaggcc gggcgcaacg acgacgcgat cacgctgatc
      301 cggcagatcc aggccaagaa cgggcttagc gaagccttgc gccgccggct ttcggagatg
      361 atgatcgccc tgggcgtcga gccccagccg gccgagacca tgccgaacga agccatgccg
      421 acggaaacca cgcccaatgc gggctgatcg cccgcggccg agatgcgaaa cgagggagag
      481 gcgaggatgg atgccacgct gcgactgacc atggcccttg ctgctgcgct gagccttgcc
      541 gcctgccagc gcgagatcat cctgcccggc gaacggctgg acccgcttgc ggtgacctcg
      601 cccgacggac ccgctgtcca gggcccggcg cccgtcacct cgaccgcgct gtcgctggcg
      661 ccgccgcgtc tcaactccga atggacccat cgtggcggca acgccgccca ccagccgggc
      721 catgtcgcgc ttggcggcgg caccagccgt gtctggaccg ccgatatcgg cgagggcaat
      781 gaccgccgcc accggatcgc cgccgatccc atcgtgggtg gtggtcgcgt cttcacgctg
      841 gacagccgcg cccgcgtcac cgcgacggcg ctttcgggcg gccgcgcatg gtcaaccgat
      901 gtgacaccgg cgctggaaaa ccgcgacagc gcctcgggcg gcgggctggc ctatgagggc
      961 ggccgcgtct atgtcaccac cggcttcggc gaactggtcg cgctggacgc gaccagcggt
     1021 gcggtgctgt ggcggcagcg cgtcggtgcg cccatcggag gcggcccggc ggtcgcgaac
     1081 ggcgtcgtct atgtggccgc gcgcgacaat gtcggctggg ccgtccgcgc cgcggacggc
     1141 aaggtcctgt ggcagacatc ggggatcgtg tccgaggcag gcgtcatggg cgtctcggtg
     1201 cccgcggtgc agggcgacac cgtcgtcttt cccttctcgt cgggccagtt gaccgccgcc
     1261 gacacgcaga ccggcgcgac cagatggaac gcgcagatcg ccggcacgcg taccgggcgc
     1321 gccatcgccg tgatccgcga cgtgaccggc gatccggtga tttcggacgg cacggtctat
     1381 ggcggcacct cgtccggacg gatcgacgcg gtcgatcttg gttcgggcat tcaggactgg
     1441 tccgcgaagg acggcgccaa cagcccggtc gcggtcgcgg gcgggtcggt tttcgcggtc
     1501 accgacgagg ccgatctggt tcgactcgat gccgcgaccg gcggcgtcat ctggcgcgtc
     1561 gatctgccct attataccga ttcccgcgtg aagaagcagg accgcatcta ttcccatttc
     1621 ggcccggtgc ttgccggggg gcggctgttc gtcgcctcgt cggacggcgt cctgcgcgcc
//
LOCUS       DTVW01000842            1625 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2038774, whole
            genome shotgun sequence.
ACCESSION   DTVW01000842 DTVW01000000
VERSION     DTVW01000842.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1625)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1625)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1625
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2038774"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>1625
                     /locus_tag="EYO87_11055"
     CDS             <1..>1625
                     /locus_tag="EYO87_11055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018000266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HIC66515.1"
                     /translation="KLPADYTQLAYVNPDAPKGGEISEAIPNSTGFDNFNPFTFRGRA
                     AVLSSVMLESILVGTADEVGAAYCLLCESLEYPESRDWVIFNLRPEARFSDGTPLTAY
                     DVLFSYETMRDKGLSSFRLVIGQQVAKAEVIDANTIKFIFTPDYPRRDVIQSVGGLPI
                     FSRKDFADNQRDLEQPMDKPFIGSGPYVFDSADINRKVIYRRNPDYWGADLPINKGRN
                     NFDRIRFEYFSDYDAAFEAFKAGEYTFRREVSSIIWATRYDFPALSRGWVKKEKLPDG
                     SIASGQAWVMNLRRPTLQDIRVREAIGLMFNFEWSNASLFYGLYERVNSFWDNSDLAA
                     TGTPSDAERALLEPVAKDLPKGVLTGEAVMAPTSGERQLDRRNVRKAAALLDEAGWTV
                     GDDGMRRNSEGRPLTLEILNDSQTFDRVINPWVQNLRALGIDARNVRVDNAEYENRAR
                     SHDFDIISDQLGQDAIPGAGLQQYFGSANVGDVFNSMGLANPAIDALISRVEAADSNE
                     RLQTATRALDRALRSLKFWVPQWYNGYNLVAYY"
BASE COUNT          320 a          510 c          508 g          287 t
ORIGIN      
        1 aagctgcccg ccgattacac gcagcttgcc tatgtcaatc ccgacgcgcc caagggcggc
       61 gagatttccg aagcaatccc gaattcgacc ggtttcgaca atttcaatcc cttcaccttt
      121 cgcggccggg ctgcggtcct gtcctcggtc atgctggaat cgatcctggt cggcaccgcg
      181 gacgaggtcg gcgcggccta ttgcctgctg tgcgaaagcc tggaatatcc cgaaagccgc
      241 gattgggtga tcttcaatct gcggcccgag gcgcgcttca gcgacggcac gccgctgacc
      301 gcctatgacg tgctgttcag ctacgagacg atgcgcgaca aggggctgtc atcgttccgg
      361 ctggtgatcg gccagcaggt cgccaaggcc gaggtgatcg acgccaacac gatcaagttc
      421 atcttcaccc ccgattatcc gcgccgcgac gtgatccagt cggtcggcgg cctgccgatc
      481 ttcagccgca aggatttcgc cgacaatcag cgcgatctgg aacagccgat ggacaagccc
      541 ttcatcggtt cgggccccta cgtctttgac agcgccgaca tcaaccgcaa ggtcatctac
      601 aggcgcaatc ccgattactg gggcgcggat ctgccgatca acaagggccg caacaatttc
      661 gaccgcatcc ggttcgaata tttctcggac tacgatgccg ccttcgaggc gttcaaggcc
      721 ggcgaataca cctttcggcg cgaggtcagc agcatcatct gggcgacgcg ctatgacttt
      781 ccggcgctga gccggggatg ggtcaagaag gaaaagctgc ccgacggcag catcgcatcg
      841 gggcaggcct gggtcatgaa cctgcgccga ccgaccctgc aggacatccg cgtgcgcgag
      901 gcgatcgggc tgatgttcaa cttcgaatgg tccaacgcat cgctgttcta cggcctctac
      961 gagcgggtca acagtttctg ggacaacagc gacctggccg cgaccggcac gccatccgac
     1021 gccgaaaggg cgctgctgga gccggtggcc aaggacctgc ccaagggcgt cctgaccggc
     1081 gaggcggtga tggcgccgac cagcggagaa cgccagcttg accggcgcaa tgttcgcaag
     1141 gcggcggcgc tgctggatga ggcgggctgg accgtcggcg atgacgggat gcggcgcaat
     1201 tccgagggtc ggccgctgac gctggagatt ctgaatgaca gccagacctt tgaccgggtg
     1261 atcaatccct gggtgcagaa cctgcgcgct ttgggcatcg acgcgcgcaa cgtgcgcgtg
     1321 gacaatgccg aatacgaaaa ccgcgcccgc agccacgatt tcgacatcat cagcgatcaa
     1381 ctgggacagg acgcgattcc cggcgccggt ttgcagcaat atttcggcag cgccaatgtc
     1441 ggcgatgtgt tcaactcgat ggggctggcc aatccggcca tcgacgccct gatcagccgg
     1501 gtcgaggccg ccgacagcaa cgagaggctg caaaccgcga cgcgggcgct ggatcgcgcc
     1561 cttcgcagcc tgaaattctg ggtgccgcaa tggtataacg gctataatct ggtcgcctat
     1621 tacga
//
LOCUS       DTVW01000843            1347 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2044110, whole
            genome shotgun sequence.
ACCESSION   DTVW01000843 DTVW01000000
VERSION     DTVW01000843.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1347)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1347)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1347
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2044110"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..814
                     /locus_tag="EYO87_11060"
     CDS             <1..814
                     /locus_tag="EYO87_11060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010398382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="formate--tetrahydrofolate ligase"
                     /protein_id="HIC66516.1"
                     /translation="AALALSDYVVTEAGFGADLGAEKFLDIKCRIANLAPSAVVLVAT
                     IRALKMNGGVARADLSTRDPAAVRRGCANLGRHIENLRGYGLPVVVALNHFDGDAEAE
                     IAVLQDYCAHHDVRAVLARHWAEGGAGAEDLAREVVALAESGKADFHTLYPSSMPLWQ
                     KIETICARIYRAAHVEAAPGIRAQLEAWEEAGHGAMPVCIAKTQYSFTTDPNQRGAPD
                     GHTIPVREVRLNAGAGFVVAICGEIMTMPGLPRHPSAETIGLDASGQVEGLF"
BASE COUNT          225 a          431 c          468 g          223 t
ORIGIN      
        1 cgcggcgctg gcgctgtccg actatgtggt gaccgaggcg ggtttcggcg ccgatctggg
       61 ggccgagaag tttctggaca tcaaatgccg catcgcgaat ctggcgccct cggcggtcgt
      121 gctggtcgcg acgatccggg cattgaagat gaatggcggc gtggcgaggg ccgatctttc
      181 gacccgggat cccgccgccg tccggcgcgg ctgcgccaat ctgggccggc atatcgaaaa
      241 cctgcgtggc tacgggctgc ccgtcgtcgt ggccctgaac catttcgatg gcgatgccga
      301 ggccgagatc gcggtcttgc aggattattg cgcccatcac gatgtccggg ccgtgctggc
      361 ccggcactgg gccgagggcg gggcaggggc cgaggatctg gcccgcgagg tggtggcgct
      421 ggccgaaagc ggcaaggccg atttccacac gctctatcca tcctcgatgc cgctgtggca
      481 gaagatcgag acgatctgcg cccgcatcta tcgcgcggcc cacgtcgagg ccgcgccggg
      541 catccgcgcg caactggaag cctgggaaga ggcgggccac ggtgcgatgc cggtctgcat
      601 cgccaagacg caatattcct ttactaccga tcccaaccag cgtggcgcgc ccgatggcca
      661 cacgatcccg gttcgcgagg tgcggctgaa cgcgggcgcg ggtttcgtcg tggcgatctg
      721 cggcgaaatc atgaccatgc caggtcttcc gcggcacccg tcagccgaga ccatcgggct
      781 ggacgccagc ggtcaggtcg agggattgtt ctgaccgatc aggccgccat ccggtcgggc
      841 ggcggtttgt gccagcggcg atagcgcacc atgtgcaacg ccgcgacagc cgcgatcgtg
      901 gaccgtccgg cgaccgcgaa atcctgatct tgcgtgccaa atccggtccg gtccgggaat
      961 gagccgtcgg gacgctggct tgcgacgatg tcggacagcc atgggccgac atcgtgatcg
     1021 gggtcgatca ggcagatgca atagatgatc cgggccagca ccgtcagatc ctttcgacgc
     1081 agcgcccaat ccgcgatccg cagacaattc tcgaagatct cgccataggc acgcgcggtg
     1141 ctgagtttcg ggcgctgtgc gccaaagccg tagatctgca tcaccaggcg cccgaacagg
     1201 tcggcccgat ccgcggtcag ggcggcggcg gatagcggcc ggcacagcca ttcctcggcc
     1261 gcggtcagca agggcggcgc gggtctggtc tgcaaggcca attgcgccgc cagatccaga
     1321 tcgtcgcggt cgcagaaatc cctgatc
//
LOCUS       DTVW01000844            1098 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2044235, whole
            genome shotgun sequence.
ACCESSION   DTVW01000844 DTVW01000000
VERSION     DTVW01000844.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1098)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1098)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1098
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2044235"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..139)
                     /locus_tag="EYO87_11065"
     CDS             complement(<1..139)
                     /locus_tag="EYO87_11065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_353433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-glutathione reductase"
                     /protein_id="HIC66517.1"
                     /translation="MGFDYDLFVIGGGSGGVRAARIAAGEHGARVGLAEESRMGGTCV
                     IR"
     gene            complement(139..894)
                     /gene="rpiA"
                     /locus_tag="EYO87_11070"
     CDS             complement(139..894)
                     /gene="rpiA"
                     /locus_tag="EYO87_11070"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018000371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-5-phosphate isomerase RpiA"
                     /protein_id="HIC66518.1"
                     /translation="MPQEPDPAKLAAARAAVALVEDGMKLGLGTGSTASIMVELLGAR
                     VQAEGLKLRCAATSKTTADLALRNGIGIESLDQLGWLDMTIDGADEVDPDLHLVKGGG
                     GAHLREKVVAAASDRMVVIADPGKIVDQLGKFPLPVEVLQFGFETTRKLIRRALDDLG
                     LGGHDVMHRLRGSDPWLTDEGNWILDLHLDAIPEPVALAHALSAIPGVVEHGLFLGMC
                     DLAIIGKADGSVVELNRDAGMDADFLAGEGEQF"
BASE COUNT          179 a          400 c          355 g          164 t
ORIGIN      
        1 cgcgaatgac gcaggtgccg cccatgcggc tttcctcggc cagtccgacc ctggcgccat
       61 gttcacccgc cgcgatgcgc gccgcgcgca ccccgcccga gccgccgccg atgacgaaga
      121 gatcgtaatc gaaacccatc agaactgctc tccctcgccg gccaggaaat cggcatccat
      181 gcccgcgtcg cggttcagtt ccacgacgct gccatcagcc ttgccaatga tggccagatc
      241 gcacatgccg aggaacaatc catgttcgac cacgcccgga atggccgaca gcgcatgggc
      301 cagcgcgacc ggctcgggga tcgcatccag atgcagatcc aggatccagt tgccctcgtc
      361 ggtcagccag ggatcgctgc cccgcagccg gtgcatgacg tcgtgtccgc caaggcccag
      421 atcgtccagc gcccggcgga tcagcttgcg cgtcgtctcg aagccgaatt gcagcacctc
      481 gaccggcagg gggaacttgc ccagctgatc gacgatcttg ccgggatcgg cgatcaccac
      541 catgcggtca ctggcggcgg ccaccacctt ttcgcgcaga tgcgcgccgc cgccgccctt
      601 gacgagatgc agatcgggat cgacctcgtc ggcaccgtcg atggtcatgt cgagccagcc
      661 gagctgatcg aggctttcga tgcctatgcc gttgcgcagg gccagatcgg cggtcgtctt
      721 cgaagtcgcc gcacagcgca gcttcagacc ctcggcctgc acgcgggcgc ccagcaattc
      781 gaccatgatg ctggcggtcg agccggtgcc gagacccagc ttcatgccgt cctcgaccag
      841 ggccaccgcg gcgcgggcgg cggccagctt ggccggatcg ggttcttgcg gcatgagcgg
      901 atctccttcg aaggctgttc cggcgctgta tagaccaagg caggcgcaag ggcgagaggc
      961 gccttcgatc cccgctcggg catgccgcgc gcccgacgag ggggcggacc ggggcccagc
     1021 cccggcccgg tcgctgccgc tgggccttga agccgcgcgg gacgcgcggg acgcgacctc
     1081 aatcccccgc ggacccgc
//
LOCUS       DTVW01000845            1482 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2045792, whole
            genome shotgun sequence.
ACCESSION   DTVW01000845 DTVW01000000
VERSION     DTVW01000845.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1482)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1482)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1482
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2045792"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..534)
                     /locus_tag="EYO87_11075"
     CDS             complement(<1..534)
                     /locus_tag="EYO87_11075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011749928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate starvation-inducible protein PhoH"
                     /protein_id="HIC66519.1"
                     /translation="MGLTPTPPVTTAAPETLLEFPDNRLLIDLCGANDRHLARIEEAL
                     GVHILRRGNQLAVVGGPEAQAETAQLLRGLYARLEQGKPVGLPEIEAALRMGIDQPSE
                     TGPVEQIEMFAAGNYELRTRKKSVEPRTDAQKAYVRSLFEHELAFGIGPAGTGKTYLA
                     VAVGVTMLINGNVDKIIL"
     gene            complement(682..1401)
                     /locus_tag="EYO87_11080"
     CDS             complement(682..1401)
                     /locus_tag="EYO87_11080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020040221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HIC66520.1"
                     /translation="MIRVRGLTKSFGPKRVLAGIEIGVERGESLCVIGQSGTGKSVLL
                     KCILGLVAPDAGTILWQDRPLDAAARPDFMRHFGMLFQGGALFDSLNVWQNVAFRLRQ
                     HMPDAKARAIAVERLGRVGLPPETAGLMPAELSGGMARRVGLARAIAHDPAVIFFDEP
                     TTGLDPIRARSINALIRGIVRETGATAITITHDMDSVRAIGDRVALLQDGRIAWDGPV
                     VRMDDAAPLADFLGHRPADGT"
     gene            complement(1398..>1482)
                     /locus_tag="EYO87_11085"
     CDS             complement(1398..>1482)
                     /locus_tag="EYO87_11085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010396139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HIC66521.1"
                     /translation="RATKSAVVAAAIGILAANFALTGLFFR"
BASE COUNT          239 a          507 c          493 g          243 t
ORIGIN      
        1 caggatgatc ttgtccacat tgccgttgat cagcatggtg acgccgacgg ccacggccag
       61 ataggtcttg ccggtgcccg cagggccgat gccgaaggcc agttcgtgtt cgaacagcga
      121 ccggacatag gccttttgcg catcggtccg cggctcgacc gacttcttgc gggtgcgcaa
      181 ttcgtaattg ccggcggcga acatctcgat ctgttcgacc gggccggttt cgctcggctg
      241 gtcgatgccc atgcgcagcg cggcctcgat ttcgggcagg cccacgggct tgccctgttc
      301 cagcctggca tagagcccgc gcaacagctg cgccgtctcg gcctgtgcct cggggccgcc
      361 gaccaccgca agctgattgc cgcgtcgcag gatgtgaacg cccaaggctt cctcgatccg
      421 cgccaggtgc cggtcattgg cgccgcacag gtcgatcagc agccggttgt cggggaattc
      481 cagcagggtt tcgggggcgg cggtcgtcac ggggggcgtc ggggtcagac ccaaatttct
      541 ctcctgctca ggcatctttc cctatggtgg cgatccgggg ggattcgcac aagatgtcgc
      601 cgggcgattt cacggcctcg gtgcaggcgc cgggaaggaa tcggccggaa aaggccgaaa
      661 cccgccgcag gccgtggcgc ttcacgtccc gtccgccggt cgatgcccca gaaagtcggc
      721 cagcggcgca gcatcatcca tccgcaccac cggcccgtcc caggcgatgc ggccgtcctg
      781 caacagcgcc acgcggtcgc cgatcgcgcg gaccgaatcc atgtcgtggg tgatggtgat
      841 cgcggtcgcg cccgtctcgc gcacgatgcc gcggatcagc gcgttgatgc tgcgcgcgcg
      901 gatcgggtca agtcccgtcg tcggctcatc gaagaagatc accgccgggt catgcgcgat
      961 ggcgcgggcc agaccgacgc gccttgccat cccgccggac aactcggccg gcatcaaccc
     1021 ggcggtttcc ggcggcaggc cgacacgacc cagacgctcg accgcgatgg cgcgcgcctt
     1081 ggcatcgggc atgtgctggc gcaggcgaaa ggcgacgttc tgccagacat tcaggctgtc
     1141 gaacagcgcg ccgccctgga acagcatccc gaaatggcgc atgaagtcgg gccgcgcggc
     1201 ggcatccagc ggccggtcct gccacaggat cgtgcccgca tccggcgcca ccagccccag
     1261 gatgcatttc agcagcaccg atttgccggt tccagactgg ccgatcacgc acaggctttc
     1321 gccccgctcg acaccgatct cgattccggc cagcacccgt ttcgggccga agcttttggt
     1381 caggccgcgg acccggatca tcggaaaaac agccctgtca gcgcgaaatt cgccgcaagg
     1441 atgccgatgg cggcggcgac gacggcggat ttggtggccc gg
//
LOCUS       DTVW01000846            1298 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2048628, whole
            genome shotgun sequence.
ACCESSION   DTVW01000846 DTVW01000000
VERSION     DTVW01000846.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1298)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1298)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1298
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2048628"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..609
                     /locus_tag="EYO87_11090"
     CDS             <1..609
                     /locus_tag="EYO87_11090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_351897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylamine--glycine ligase"
                     /protein_id="HIC66522.1"
                     /translation="DTGPNTGGMGAYSPAPVLTESLQDQVMTRIVRPTIAEMAARGTP
                     FQGVLYAGLMIAGGEARLVEYNVRFGDPECQALMLRLGAQALDLLLACAEGRLAETQI
                     TWGHDHAMTVVMATKGYPGSYEKGTPIRGLDRLPESSFEMVFHAGTAERDGRIIATGG
                     RVLACTGRGATLAEAHDRAYALVDAIDWPDGFCRRDIGWRAL"
     gene            complement(687..>1298)
                     /gene="prs"
                     /locus_tag="EYO87_11095"
     CDS             complement(687..>1298)
                     /gene="prs"
                     /locus_tag="EYO87_11095"
                     /EC_number="2.7.6.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate diphosphokinase"
                     /protein_id="HIC66523.1"
                     /translation="DLHAAQIQGFFDIPVDNLYAAPVFALDVQHHFKDRMDDLMVVSP
                     DVGGVARARELAQRIGAPLSIVDKRREKAGEIAEMTVIGDVAGKACIIVDDICDTAGT
                     LVKAAQLLTDNGATEVHAYISHGVLSGPAVERVSKSVMKSLVITDSIQPAKAVKEAPN
                     IRIVPTAPMFTQAILNIWNGTSVSSLFETDTLLPIYEGLYTTG"
BASE COUNT          220 a          426 c          424 g          228 t
ORIGIN      
        1 gataccggcc cgaataccgg cggcatgggc gcctacagcc cggcgcccgt cctgaccgag
       61 tcattgcagg atcaggtcat gacgcggatc gtgcgcccga ccatcgcgga gatggccgcc
      121 cgcggaacgc cgttccaggg cgtgctctac gccgggctga tgatcgccgg cggcgaggcg
      181 cggctggtcg aatacaatgt ccgtttcggc gatccggaat gtcaggccct gatgctgcgg
      241 ctgggcgcgc aggcactgga cctgctgctc gcctgtgccg agggccggct ggccgaaacc
      301 cagatcacct ggggccacga tcacgccatg acggtggtga tggccacgaa gggttatccc
      361 ggcagctacg aaaagggaac tccgatcagg ggcctggatc ggttgcccga aagcagtttc
      421 gagatggtgt tccatgccgg aaccgccgaa cgcgacggcc ggatcatcgc cacgggcggc
      481 cgcgttctgg cctgcaccgg tcgcggcgcg accctggcag aggctcatga ccgcgcctac
      541 gcattggttg atgcgatcga ctggcccgac ggcttctgcc gccgcgacat cggctggcgc
      601 gccctttgat ttgccttggt tgaaatatcc cgggggtgaa ttgccgcaag gcaagagggg
      661 gcagcgcccc ctgcccggcc cgcggctcag ccggtcgtgt acaatccctc atagatcggc
      721 aacagcgtgt ccgtctcgaa cagcgagctg accgaggtgc cgttccagat gttcaggatc
      781 gcctgggtga acatcggcgc ggtcggcacg atgcggatat tgggtgcttc cttcaccgcc
      841 ttggctggct ggatcgaatc ggtgatgacc agtgatttca tcaccgactt gctgacccgc
      901 tcgaccgcag ggccggacag gacgccgtga ctgatatagg cgtgaacctc ggtcgcgccg
      961 ttgtcggtca gcaattgcgc cgccttgacc agcgtcccgg ccgtgtcgca gatatcgtcg
     1021 acgatgatgc aggcctttcc cgccacatcg ccgatcaccg tcatttcggc aatctcgccg
     1081 gccttctcgc ggcgcttgtc cacgatcgac aggggcgcgc cgatccgctg ggccagttcg
     1141 cgcgcccgcg ccaccccgcc gacatcgggc gagaccacca tcaggtcgtc catccggtcc
     1201 ttgaaatgat gctgcacgtc cagcgcaaag accggcgccg catagaggtt gtccaccgga
     1261 atgtcgaaaa agccctgaat ctgggcggcg tgcagatc
//
LOCUS       DTVW01000847            1272 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2048936, whole
            genome shotgun sequence.
ACCESSION   DTVW01000847 DTVW01000000
VERSION     DTVW01000847.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1272)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1272)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1272
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2048936"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            93..1175
                     /locus_tag="EYO87_11100"
     CDS             93..1175
                     /locus_tag="EYO87_11100"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011046927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HIC66524.1"
                     /translation="MLYWLSSLSEGGDLFNLFRYITFRAGAAFFTALIFGFIFGPPLI
                     NYLRRTQKKGQPIRDDGPETHLIKAGTPTMGGLLILSALFVSTLLWARLDNGYVWIVL
                     TVTAGYAVIGFADDYSKISKMNTKGVPGRVRIALGLALAFVASAWAMWLHPAGLSGQL
                     ALPVFKDTLINLGVFFIPFGMLVIVGAANAVNLTDGLDGLAIMPVMIAAGTLGVIAYT
                     VGRADFTEYLGVYHVPGSGEILIFVAALIGGGLGFLWYNAPPAAVFMGDTGSIALGGA
                     LGAIAVVTKHEIVLAVVGGLFVVEALSVIIQVLYFKRTGKRVFLMAPIHHHFEKLGWK
                     EPQIVIRFWIIALVLALIGLATLKLR"
BASE COUNT          199 a          382 c          422 g          269 t
ORIGIN      
        1 gccgggcgat gtggtgctgg tcaaggggtc gaaatcctcc aggatttcgg ccgtggtcga
       61 ggcgctgcgc aacaagatga agggatgacc cgatgctcta ctggctgagc agcctgtccg
      121 agggcggcga cctcttcaac cttttccgct acatcacctt tcgcgccggc gcggctttct
      181 ttaccgcgct tatcttcggt ttcatcttcg ggccgccgct gatcaactac ctgcgccgca
      241 cccagaagaa gggccagccg attcgcgacg atggccccga gacccatctg atcaaggcgg
      301 ggacgccgac gatgggcggg ctgctgatcc tgtcggcgct gttcgtgtcc acgctgctat
      361 gggcgcggct ggacaacggc tatgtctgga tcgtgctgac ggtgacggcg ggctacgcgg
      421 tgatcggttt cgccgacgat tattccaaga tcagcaagat gaacaccaag ggcgtgccgg
      481 gacgggtacg gatcgcgctc gggctggcgc ttgccttcgt cgcctcggcc tgggcgatgt
      541 ggctgcatcc ggcaggtctg agcggacaat tggcgctgcc ggtcttcaag gacacgctga
      601 tcaatctggg cgtgtttttc atccccttcg gcatgctggt catcgtgggc gcggccaatg
      661 cagtgaacct gaccgacggt ctggacggac tggcaatcat gccggtgatg atcgccgccg
      721 gcacgctggg cgtcatcgcc tatacggtcg gccgggccga ctttaccgaa tatctgggcg
      781 tctaccacgt gccggggtcg ggcgagatcc tgatcttcgt cgccgccctg atcggcggag
      841 gcctgggctt tctgtggtat aacgcgcctc cggcggcggt cttcatgggc gataccggca
      901 gtatcgccct tggcggcgcg cttggcgcca tcgcggtggt gaccaagcac gagatcgtgc
      961 tggccgtcgt cggcggcctt ttcgtggtcg aggcgctcag cgtcatcatc caggtgctct
     1021 acttcaagcg caccggcaag cgcgtcttcc tgatggcccc gattcaccac catttcgaaa
     1081 agctgggctg gaaggaaccg cagatcgtga tccgcttctg gatcatcgcg ctggtccttg
     1141 cgctgatcgg gctggcgacg ctgaaattgc gctaggcttt gccttggtgc aaatatcctc
     1201 gggggtccgg gggcagacag cccccggctt gaacttcagg tgtgacggat gatcccggta
     1261 cagggtgtcg aa
//
LOCUS       DTVW01000848            2442 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2050022, whole
            genome shotgun sequence.
ACCESSION   DTVW01000848 DTVW01000000
VERSION     DTVW01000848.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2442)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2442)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2442
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2050022"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            440..1117
                     /locus_tag="EYO87_11105"
     CDS             440..1117
                     /locus_tag="EYO87_11105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018387202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HIC66525.1"
                     /translation="MNLSATQLKRRPLHEELTESLRKLIVSGELQPGRKVPEKELCEL
                     YGVSRTPLREALKVLATDGLVNLEPNRGAWVSRITVEELDELFPVMGALEALAGELAC
                     KHITDDEIAQVRALHDRMFAHYTARELEAYFKLNQQIHETILAAARNATLTVQYGTLA
                     ARVRRGRYMANMTRERWDQAMKEHEDILDALQARDGGRLAVILREHMEKTSVTLREWL
                     LSSPDEG"
     gene            complement(1228..1881)
                     /locus_tag="EYO87_11110"
     CDS             complement(1228..1881)
                     /locus_tag="EYO87_11110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007009172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HIC66526.1"
                     /translation="MTANIAITNRSLHDQVVSRVRDLIIEGVLEPGSRIDEARLIEEL
                     EVSRTPFREALRTLAAEGLVIVRPSKGSIVRKLTREDVFSMLEVLAHLERLAGELACA
                     RAGDEQIQALVDLHQRMMECYRQRDRLPYYKLNQEFHSRLAELSKNTTLQDMQANIQA
                     RLKRIRYIGNQKPESWAGAVADHEEMVAALKDRDGKRLGDAMSDHLGRTWERVKDSI"
     gene            2036..>2442
                     /locus_tag="EYO87_11115"
     CDS             2036..>2442
                     /locus_tag="EYO87_11115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009177354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HIC66527.1"
                     /translation="MKTFRKSAAGLMVCAVTMAAAPVAAETYIVAVGAASNSLQGRSA
                     AKFAEDLQARLGDADKVEFYADGQLGDEKELVQKLRLGTVQFTLVSSIMTNFLPEFAL
                     FDMPFLVRDRAHLRAIDAQIIQPDLAPKLDEKGL"
BASE COUNT          462 a          754 c          777 g          449 t
ORIGIN      
        1 acgacacggc acagatcgcc gacgccgcgc tgatgttcga ggaatatgtc gccgccgaac
       61 acgaggccgg gcggtggagt ctgccgctgc gcccgcccgg tgttccggtc ctgctgcacg
      121 gccattgcca tcagaaggcg ttggatgtca tgcccgcgat ccacaaagcg ctggctttgc
      181 tgcccgaaac cgatattcaa ttgatcgaga ccagctgctg cggcatggcc ggatccttcg
      241 gctatggact ggaaaccgag gcgatctcgc gccagatggg ggaactgagc ctgtttcccg
      301 ccatccgcgc cgcgcccggg gatgcgatca tcgtggcgga cggcacctcg tgccgccacc
      361 agatcgcgga cgggaccggg cgcagggcga ttcacgtcgc ccggcttttc gaacttgcgc
      421 tccaggaggc gcgttgacga tgaacctttc cgcgacccag ttgaagcgtc gcccgctgca
      481 cgaggaactg accgaatcgc tgcgaaagct gatcgtgtcg ggcgagttgc agcccggccg
      541 caaagtgccc gaaaaggaat tatgcgagct ttacggcgtc tcgcggacgc ccctgcgcga
      601 ggcgctgaag gtgctggcga ccgacgggct ggtcaatctg gaacccaatc gcggcgcctg
      661 ggtcagccgc atcacggtcg aggaactgga cgaattgttc ccggtcatgg gcgcgctgga
      721 ggcgctggcg ggcgaactgg cctgcaagca cattaccgac gacgagatcg cgcaggtccg
      781 cgccctgcac gaccggatgt tcgcccatta cacggcgcgc gagcttgagg cctatttcaa
      841 gctgaaccag cagatccatg agacgatcct ggcggccgcc cgcaacgcca cgctgacggt
      901 gcagtatggc accctggcag cgcgggtgcg acgcggacgt tacatggcca acatgacccg
      961 cgaacgctgg gatcaggcca tgaaggaaca cgaggacatt ctggacgcac ttcaggcccg
     1021 cgacggcggg cggctggcgg tgatcctgcg cgagcatatg gaaaagacca gcgtgaccct
     1081 gcgcgaatgg ctgctgtctt cgcccgacga gggttagggc acccgcatct tcgaacccgg
     1141 gaccatgacc ggctctcggt ccgtccacgc ggcgtgaacg gatcgcaggt ttcggcgggg
     1201 cagcgataac gggtccaatg atctggtcta tatgctgtcc ttgacgcgct cccacgtccg
     1261 gccgagatgg tcggacatgg cgtcgccaag ccgcttgccg tcccgatcct tcaacgccgc
     1321 gaccatctct tcgtgatcgg caaccgcgcc ggcccatgat tccggtttct ggttgccgat
     1381 atagcggatg cgcttcagcc gtgcctggat attggcctgc atgtcctgca gcgtcgtgtt
     1441 tttcgacagt tcggccagcc gcgagtgaaa ttcctggttc agcttgtaat aaggcagacg
     1501 gtcgcgctgg cggtaacatt ccatcatccg ctggtgcaga tccacaagcg cctggatctg
     1561 ttcgtcgccg gcccgcgcac aggccagttc gccggccagc cgttcaagat gcgccagcac
     1621 ctccagcatc gaaaagacat cctcgcgcgt cagcttgcgc acgatgctgc ctttcgacgg
     1681 gcgaacgatc accagcccct cggcggcgag tgtgcgcagg gcttcgcgga acggcgtgcg
     1741 agagacctcc agttcctcga tcagacgggc ctcgtcgatt cggctgccgg gctccagaac
     1801 gccctcgatg atcaggtccc gcacccgact gacgacctga tcgtgaagag aacgatttgt
     1861 gatcgcgatg ttggccgtca tcctggaacc ttcacctttt cctgaatttc aaaggcttat
     1921 gagatcatgg cgcagtgtag caagaaaagg attgctggtc gataccttgc gcatgtatac
     1981 aaaatacatc gatcgaatat gcagttctgc atgttctggg aggaggagac agcacatgaa
     2041 aacctttcgg aaaagcgccg ccggcctgat ggtttgcgcc gtgacgatgg ccgcggcacc
     2101 ggtcgcggcc gagacctaca tcgtggcggt gggggccgcc tcgaacagct tgcagggtcg
     2161 cagcgcggcg aagttcgccg aggatctgca ggcccggctg ggtgatgccg acaaggtcga
     2221 attctatgcc gacggccagc tgggcgacga gaaggaactg gtccagaagc tgcggctggg
     2281 cacggtgcag ttcacgctgg tatcgtcgat catgaccaat ttcttgccgg aattcgcatt
     2341 gttcgacatg ccgttcctgg ttcgggaccg ggcccatctg agggccatcg acgcccagat
     2401 catccaaccc gatttggcgc cgaagcttga cgagaaaggc ct
//
LOCUS       DTVW01000849            1230 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2050431, whole
            genome shotgun sequence.
ACCESSION   DTVW01000849 DTVW01000000
VERSION     DTVW01000849.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1230)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1230)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1230
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2050431"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..810)
                     /locus_tag="EYO87_11120"
     CDS             complement(<1..810)
                     /locus_tag="EYO87_11120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HIC66528.1"
                     /translation="MHLELRHLRTVQAIHEQGGLARAAEVLNITQSALSHQVKALEQQ
                     AGVELFVRRAKPMRLSAAGMRVLRLAEQVLPMVAATEAEFKGVEAGRIGRLHIAMECH
                     ACFDWLLPVLDIFRRAWPDVDVDIRQRLAFGALPALAREEVDLVISSDPEDVPGVIYQ
                     PLFDYAPTLVVPAGHPLTIKGYADPRDLADETLITYPMERARLDVFSQFLTPAGIEPA
                     RQRTVELTAVSLMLVASRRGVAVMPDWVLRRESANPDIAMLPLGPGGILRRL"
     gene            901..>1230
                     /gene="metF"
                     /locus_tag="EYO87_11125"
     CDS             901..>1230
                     /gene="metF"
                     /locus_tag="EYO87_11125"
                     /EC_number="1.5.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008027962.1"
                     /note="MTHFR; catalyzes NADH-linked reduction of
                     5,10-methylenetetrahydrofolate to 5-methyltetrahydrofolate
                     using FAD as a cofactor; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5,10-methylenetetrahydrofolate reductase"
                     /protein_id="HIC66529.1"
                     /translation="MTRTAPKISFEFFPPKTLDASFRLWEAARALAPLNPDFVSVTYG
                     AGGTTRKLTHDAVTTINRHYGLNVAAHLTCVEATRAETMEIVQSYADAGIREIVALRG
                     DAPKGQDR"
BASE COUNT          226 a          425 c          389 g          190 t
ORIGIN      
        1 gaggcggcgc aggatgccgc ccgggcccag aggcaacatg gcgatatcgg gattggcgga
       61 ttcgcgacgc agaacccagt cgggcatcac cgccacacct cgccgcgagg cgaccagcat
      121 cagcgacacc gccgtcagtt ccaccgtgcg ctggcgggcg ggctcgatcc cggcgggggt
      181 caggaactgg ctgaacacgt ccagccgcgc acgctccatc ggataggtga tcagcgtttc
      241 atccgccaga tcccgcgggt cggcatagcc cttgatggtc agcggatgcc cggccgggac
      301 caccagcgtg ggcgcatagt cgaatagcgg ctggtagatc acgcccggca catcctcggg
      361 gtcggacgag atgaccagat cgacctcttc gcgcgccagc gcgggcagcg cgccgaaggc
      421 cagccgctgg cggatgtcca cgtccacgtc gggccatgcc cggcggaaga tgtccagcac
      481 cggcagcagc cagtcgaaac aggcgtgaca ttccatcgcg atatgcagcc ggccgattcg
      541 gcccgcctcg acgcccttga actcggcttc ggtcgccgcg accatgggca atacctgctc
      601 ggccagccgc aggacgcgca ttccggccgc agacagccgc atcggcttgg cccggcgaac
      661 gaacagttcc accccggcct gctgctccag cgccttgacc tgatgcgaca gcgccgattg
      721 ggtgatgttc agtacttcgg ccgcccgcgc caggccaccc tgttcgtgga tcgcctgaac
      781 cgttcgcaga tggcgcagtt ccagatgcat gttgagcccg tttcaagttt atcttgagaa
      841 ttatgaattt gtctcacggc cccgatgatg gcacaagagg cgcaagacaa aggaatcgcc
      901 atgacccgca ccgcgccgaa gatcagcttc gaattctttc cgcccaagac gctggacgcc
      961 tcgttccgtc tgtgggaagc cgcgcgcgcc ctggccccgc tgaaccccga tttcgtgtcg
     1021 gtcacctatg gcgcgggcgg caccacgcgc aagctgaccc atgacgcggt gacgacgatc
     1081 aaccgccatt acgggctgaa cgtcgccgcc cacctgacct gcgtcgaggc cacgcgcgcc
     1141 gagacgatgg agatcgtgca atcctatgcc gatgccggaa tccgcgaaat cgtggccctg
     1201 cgcggcgatg cgcccaaggg gcaggaccgc
//
LOCUS       DTVW01000850            1036 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2050506, whole
            genome shotgun sequence.
ACCESSION   DTVW01000850 DTVW01000000
VERSION     DTVW01000850.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1036)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1036)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1036
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2050506"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(354..>1036)
                     /locus_tag="EYO87_11130"
     CDS             complement(354..>1036)
                     /locus_tag="EYO87_11130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008282520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="4-hydroxy-3-methylbut-2-en-1-yl diphosphate
                     synthase"
                     /protein_id="HIC66530.1"
                     /translation="EKYGEPCPDAMVESGLDHIRILEDNDFHDFKISVKASDVFLAAA
                     AYQQLAEATDAPIHLGITEAGGLRGGTVKSAVGLGNLLWAGIGDTIRVSLSADPVEEV
                     KVGFEILKSLGLRTRGVQIISCPSCARQGFDVIKTVEALEQRLEHIKTPMSLSIIGCV
                     VNGPGEALMTDLGFTGGGAGSGMIYMAGRQSHKMSNEQMIDHIVDLVEKRAETIEAEN
                     ATAETAAE"
BASE COUNT          161 a          347 c          347 g          181 t
ORIGIN      
        1 cgcgacggcg cggcggtctg gcacaaggaa tgggtgatgg atgcgcaggg cgatcgggat
       61 cgcactgcga tggcccgact cgtctcgacg ccggtcgcgc tggcgatcgc ggcagtgcgg
      121 gacgggcgca tcgcgccggg tgtccatgcc gcgccggatg cgcccgacct gatcgccgag
      181 tggctggccg agatcggcca gatcgcgcag catctggaaa aggtggatca cctgggctga
      241 ggatcgcgag ggcgccgcca gacgcgcctc tgccggggca agggatcgat cggcgaccac
      301 ggccctgcac tggggcgcca ccatcgcggg cgggccggcc ctgagacgga aagctattcc
      361 gccgctgtct cggccgtggc gttttcggcc tcgatcgtct cggcgcgttt ctcgaccaga
      421 tcgacgatgt ggtcgatcat ctgttcgttc gacatcttgt ggctctggcg gccggccatg
      481 tagatcatgc cgctgcccgc gccgccgccg gtaaagccca gatcggtcat cagtgcctcg
      541 ccgggaccgt tcaccacgca gccgatgatc gacaggctca tcggcgtctt gatatgttcc
      601 agccgctgtt ccagcgcctc gaccgtcttg atgacatcga agccctgccg cgcgcaggac
      661 gggcaggaaa tgatctgcac gccgcgcgtc cgcagcccca gcgatttcag gatctcgaac
      721 ccgaccttca cctcttcgac cggatcggcc gacaggctga cgcggatcgt gtcgccgatc
      781 ccggcccaga gaaggttgcc cagcccgacc gcggatttca ccgtgccgcc gcgcagcccg
      841 ccggcctcgg tgatgcccag atggatcggc gcgtcggtcg cctcggccag ttgctgatag
      901 gcggcggcgg ccaggaacac gtcgctggcc ttcacgctga tcttgaagtc gtgaaaatcg
      961 ttgtcctcca ggatccggat gtgatcgagc ccggattcga ccatcgcatc ggggcagggt
     1021 tcgccatatt tctcca
//
LOCUS       DTVW01000851            5178 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_20518, whole
            genome shotgun sequence.
ACCESSION   DTVW01000851 DTVW01000000
VERSION     DTVW01000851.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 5178)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5178)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5178
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_20518"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            234..1373
                     /locus_tag="EYO87_11135"
     CDS             234..1373
                     /locus_tag="EYO87_11135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011751261.1"
                     /note="catalyzes the formation of UDP-galactofuranose from
                     UDP-galactopyranose; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-galactopyranose mutase"
                     /protein_id="HIC66531.1"
                     /translation="MDILLVGAGLSGAVIGRRLAEAGHACRIIDARGHIGGNCHTARD
                     PGTGVMMHVYGPHIFHTDDEEVWDYVNGFSDFVPFRNRVKSTTRGAVYSLPVNLLTIN
                     QFFGRTMRPDEARAFIGDLAETGISEPRNFEEQALRLIGRDLYEAFFKGYTEKQWGCS
                     PTELPASILKRLPLRFNYDDNYFFHRFQGMPRDGYTAMIAAILDHPNIRVDLDTPHAP
                     DMTADHVFWSGPLDGYFDYDLGRLGYRTLDFERFTYRGDYQGCAVMNYGDAEVPWTRI
                     TEHKHFSPWETHEGSICYREYSRACGPDDIPYYPIRLVEEKALLEEYVARAETLSGVT
                     FVGRLGTYRYLDMDVTIREALDTATAFLACGAAERPAPAFLRRPL"
     gene            1489..2490
                     /locus_tag="EYO87_11140"
     CDS             1489..2490
                     /locus_tag="EYO87_11140"
                     /inference="COORDINATES: protein motif:HMM:PF00535.24"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HIC66532.1"
                     /translation="MVNDAQQAGDFDLSVIVPVHNAERHLEKLAGTVFGLGRKGLRCQ
                     MICVDDASSDASPAILRDLAATHPDLIAILGDDNRGAGIARNEGWPLASGRYALFFDA
                     DDILHGEVLADAIRDMDAAPDIDLAMFAYRYEREETASFTDMNYDDRKTLDLLLKGQA
                     VETGRIEDMAGLLTFTNYPWNKLLRTAHYRDRGMRFGRTRVNNDILGHWHGLLLARAI
                     MLRDAVLCTHVVHPAGTNLTNAFGAERLAMFEALEETYDFLEARPVLRRRFAHHFWAL
                     CDRLAGWARPRLDPALRIDFEARYAALLGRLDLGDLARMRTRHSPRLAGSLVNHLIR"
     gene            2495..3835
                     /locus_tag="EYO87_11145"
     CDS             2495..3835
                     /locus_tag="EYO87_11145"
                     /inference="COORDINATES: protein motif:HMM:PF13641.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HIC66533.1"
                     /translation="MALPRLSIIVTAYNIEPYIRESLDCVLAQTLRDIEIIVVDDGSS
                     DGTPAIIREYAERDARIRPILFQTNTIGGVATAANAGIEAATGDFIGFADGDDLYDPT
                     MFARLHEAAIAHSADLAMCDYQLLDARTGETRDPADAGRWRDYPAETALDLDEVTRRE
                     MLRFISVPWRKIYRRDLVERINLRFPVGDYFYEDNPFHWAAILGGRRIVLVPEKLCRH
                     RVARVGQTMATVDSRLLRIFHHHDNIRDWLRLHGMDAEYGPDLLGWTANQLSWVSQRT
                     EGPLQRELFDRLRPVIDQYDDQMLEDFGQRNGRGRTFRMLKALKAGDFADFDKAALSG
                     RPAPSGTLPDNGRAARGNTVLARGLYHLRQSGLRETARMTARYVKDRTGLDLPRHRSW
                     QRLGRNPQAVTNEDLMAALTILQKDIRLLRADMMRMGRDLPAAPERGGGDDRQD"
     gene            3861..4958
                     /locus_tag="EYO87_11150"
     CDS             3861..4958
                     /locus_tag="EYO87_11150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66534.1"
                     /translation="MTTVHLHVGMPKCASSALQSLLHRNDRRHRAEGLCYPESFRESG
                     GYFSHRPLHRLAPEAIPAAIDTIAREAEAAGCARLLISSEEFTNSQWDRPITGTVVDA
                     LNARFGTDNVRILMLFRNHFPFVESVYAQFLKGGLFRTPQDVFAGPDRGGITTFAASF
                     RQRNGFDFFSYGDFIERMRFHAPFNPFDLLSIERADWGGQDVLDVLCARLGVSRGDEA
                     VAANTRYSETALALLHHARRVHGLDRTRERRDMIAALFPPGKRAFSRLLHVSGRLFDR
                     IAEAAERDRRYFLRHTSEPCAALFAIPESFAGRRDRPEDLRLPRWGTELVDRIMQPDR
                     ISFAEAKRIRNALMKSASSTPGTEEGRGNPA"
BASE COUNT          832 a         1796 c         1690 g          860 t
ORIGIN      
        1 cggcgatggc ggtgcagggc gcgtcctggg cgatgatcgg gatgggttac gtcctgggcg
       61 gctgggccgg gctgtttctg ggcctgccgc tggcgatgct ggcggcgggc cggctgcaaa
      121 ccgccgatcc cgactgaggc tgcggccgtg gcgcgcatcc cggccgttgc gccccccctt
      181 gtcttgcccg tgcgggcgcc gctaatcagg ccccgcagga ttgtggggaa cggatggaca
      241 ttcttctggt gggggcgggc ctgtcgggcg ccgtgatcgg gcgcaggctg gccgaggcgg
      301 gacatgcctg ccgcatcatc gacgcgcgcg gccatatcgg cggcaattgc cataccgcgc
      361 gcgatcccgg aaccggggtg atgatgcatg tctacgggcc gcatatcttc cacaccgacg
      421 acgaagaggt ctgggattac gtcaacggct tttccgattt cgtgccgttc cggaaccggg
      481 tgaaatccac cacccgcggc gcggtctatt cgctgccggt gaacctgctg accatcaacc
      541 agttcttcgg ccgcaccatg cgccccgacg aggcccgcgc cttcatcggg gacctggccg
      601 agaccggcat ttccgagccg cggaatttcg aggaacaggc gctgcgcctc atcgggcgcg
      661 atctctacga ggccttcttc aagggctata ccgaaaagca atggggctgt tcgcccaccg
      721 aattgcccgc ctcgatcctg aaacgcctgc ccctgcgctt caactacgac gacaattact
      781 tcttccaccg gttccaggga atgccgcgcg acggctatac ggcgatgatc gccgcgattc
      841 tcgaccatcc gaacatccgc gtcgatctgg acacccccca tgcgccggac atgacggccg
      901 atcacgtctt ctggtccggg ccgctggacg gctatttcga ctatgacctg gggcggctgg
      961 gctatcgcac gctggatttc gaacgcttca cctaccgggg cgattaccag ggctgcgcgg
     1021 tgatgaatta cggcgatgcc gaggtgccct ggacgcggat caccgaacac aagcatttca
     1081 gcccctggga gacgcatgag ggcagcatct gctatcgcga atattcgcgc gcctgcggac
     1141 cggacgacat cccctattat ccgatccgcc tggtcgagga aaaggcgctg ctggaggaat
     1201 atgtcgcccg cgccgagacc ctgtcgggtg tcaccttcgt cgggcggctg ggcacctatc
     1261 gctatctcga catggacgtg accatccgcg aggcgctgga cacggccacg gccttcctgg
     1321 cctgcggcgc ggcggaacgg ccggcaccgg cctttctgcg ccggccgctg tgagggactt
     1381 gccgcgcggc acggcgcgcg cgccggtccg ggtggcctgt tcggcgcggc gcggaaggtc
     1441 tatacccgcc ccggcgcggc gcggaccgcg gcacaagaag gatgtccgat ggtaaacgac
     1501 gcgcaacaag ccggcgattt cgatctcagc gtcatcgtcc cggtccacaa tgccgaacgg
     1561 catctggaaa agctggccgg gaccgtcttc gggcttggcc ggaaggggct gcgctgccag
     1621 atgatctgcg tcgacgacgc ctcgagcgat gccagcccgg ccatcctgcg cgacctggcc
     1681 gccacccatc cggacctgat cgcgatcctc ggcgacgaca atcgcggcgc gggcatcgcg
     1741 cgcaacgagg gctggcccct ggcgagcgga cgctatgcgc tgttcttcga cgccgacgac
     1801 atcctgcatg gcgaggttct ggccgatgcg atccgcgaca tggatgcggc gccggacatc
     1861 gatctggcga tgttcgccta tcgctacgaa cgcgaggaaa cggccagttt caccgacatg
     1921 aactacgacg accgcaagac cctggatctg ctgctgaagg ggcaggcggt cgaaaccggc
     1981 cggatcgagg acatggccgg gctgctgacc ttcaccaatt acccctggaa caagcttctg
     2041 cgcaccgccc attaccgcga ccgggggatg cgcttcggcc gcaccagggt caacaacgac
     2101 atcctgggcc actggcacgg cctgcttctg gcgcgcgcca tcatgctgcg cgacgcggtc
     2161 ctgtgcaccc atgtcgtcca tcccgccggc accaacctga ccaatgcctt cggcgccgaa
     2221 cgtctggcca tgttcgaggc gctcgaggaa acctatgatt tcctcgaggc gcgcccggtc
     2281 ctgcgccgcc gcttcgcgca tcatttctgg gcgctctgcg accgtctggc gggctgggcc
     2341 cggccgcggc tggacccggc cctgcgcatc gatttcgagg cccgctacgc cgccctgctg
     2401 gggcggctgg atctgggcga tctggcgcgg atgcggaccc ggcattcgcc ccgcctggcc
     2461 ggatcgctcg tcaatcacct gatccgctga ggacattgcc ttgcccagat tgtcgatcat
     2521 cgtcaccgcc tacaatatcg aaccctatat ccgcgaaagc ctggattgcg tcctggccca
     2581 gacgctgcgg gatatcgaga tcatcgtcgt cgatgacggc tccagcgacg gaacgccggc
     2641 aatcatccgc gaatacgccg aacgcgacgc ccggatccgc ccgatcctgt ttcagacgaa
     2701 cacgatcggc ggcgtcgcca ccgccgccaa tgccggcatc gaggccgcga ccggcgattt
     2761 catcggcttc gcggatggcg acgaccttta cgatccgacc atgttcgccc ggctccacga
     2821 ggccgcgatc gcccattccg ccgatctggc catgtgcgat tatcagcttc tggacgcccg
     2881 caccggcgag acccgcgatc ccgccgatgc cgggcgctgg cgcgattatc cggccgagac
     2941 cgcgctggat ctggacgagg tcacccggcg cgagatgctg cgcttcatct cggtgccctg
     3001 gcgcaagatc tatcgccgcg acctggtcga gcggatcaac ctgcgctttc cggtcggcga
     3061 ttacttctac gaggacaatc ccttccactg ggccgcgatc ctgggcgggc ggcgcatcgt
     3121 gctggtcccg gaaaagctgt gccggcaccg ggtggcgcga gtcggacaga ccatggcgac
     3181 ggtggacagc aggctgctgc gcatcttcca ccaccatgac aacatccgcg actggctgcg
     3241 gctgcacggg atggatgccg aatacggccc cgatctgctg ggctggaccg cgaaccagct
     3301 gtcctgggtc agccagcgca ccgagggccc gctgcaacgc gagcttttcg accggctgcg
     3361 tccggtgatc gaccagtatg acgatcagat gctggaggat ttcggccagc gcaacggccg
     3421 cggccgcacc tttcggatgc tcaaggcgct gaaggcgggc gatttcgccg atttcgacaa
     3481 ggcggcgctg tcgggccgcc cggccccgtc cgggacgctg cccgataacg ggcgcgcggc
     3541 gcgcggcaat accgtgctgg cccgcggtct ctatcacctg cgccagtccg gcctgcgcga
     3601 gacggcgcgg atgacggcgc gctatgtcaa ggaccgcacc gggctcgacc tgccccggca
     3661 ccggtcctgg cagcggctgg gccggaatcc gcaggcggtg acgaacgagg atctgatggc
     3721 ggcgctgacc atcctgcaaa aggatatccg ccttctgcgc gccgacatga tgcggatggg
     3781 ccgggacctg cccgccgccc ccgagcgggg cggcggcgac gaccggcagg actgacggga
     3841 acgggggaac agggacgggg atgacgacgg tccatctgca tgtggggatg cccaaatgcg
     3901 cctcttcggc gctgcaatcg ctgctgcacc gcaacgaccg gcgccaccgc gccgaggggc
     3961 tgtgctatcc cgaaagcttc cgcgagagcg gcggctattt cagccaccgc ccgctgcacc
     4021 gcctggcccc ggaggcgatt cccgccgcca tcgacacgat cgcccgcgag gccgaggcgg
     4081 cgggctgcgc ccggctgctg atctcgtccg aggaattcac caattcgcaa tgggaccggc
     4141 cgatcaccgg caccgtcgtc gatgcgctga atgcccgttt cgggaccgac aatgtccgca
     4201 tcctgatgct gttccgcaac catttcccct tcgtggaatc ggtctatgcc cagttcctga
     4261 agggcggcct gttccgcacc ccccaggatg tcttcgccgg gccggaccgg ggcggcatca
     4321 ccacctttgc cgccagtttc cgccagcgca acggcttcga tttcttcagc tatggcgatt
     4381 tcatcgaacg gatgcgcttt cacgcgccct tcaatccctt cgaccttctg tccatcgaac
     4441 gggcggattg gggcgggcag gacgtgctgg acgtgctgtg cgcgcggctg ggcgtcagcc
     4501 gcggcgacga ggccgtcgcg gccaataccc gctattcgga aacggcgctg gcgctgctgc
     4561 atcatgcacg cagggtgcat ggcctcgacc ggacacggga acggcgcgac atgatcgcgg
     4621 ccctgtttcc gcccggcaaa cgggccttct cgcggcttct gcatgtcagc ggccgcctgt
     4681 tcgaccgcat cgccgaggcc gcggaacgcg accgccgcta tttcctgcgc cacacatccg
     4741 aaccctgcgc ggcgcttttc gccatccccg aatccttcgc cggccgccgc gaccggcccg
     4801 aggatctgcg cctgccccgc tggggcaccg aactggtcga ccggatcatg cagcccgacc
     4861 ggatctcctt cgccgaggcg aaacggatcc ggaatgccct gatgaaatcc gcatcctcca
     4921 cgcccgggac cgaagaaggc cgcggcaacc cggcgtaaga aagccgtcgc ccgcctcagt
     4981 ccggctgcag gacgatctcg tcgcccgcaa gggtgacgcg ggcgggggtg agatcggcgg
     5041 cctcgccccg cgcgcgcagg gcggcgaggc cgtcgcagaa ggcgttgata tcggtcatgt
     5101 ccagcccgcg caggcatttc ggatcgacct gccaccaggc gctgtccagc agccgggcgg
     5161 cctgttccgg atcgaagc
//
LOCUS       DTVW01000852            1254 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2053588, whole
            genome shotgun sequence.
ACCESSION   DTVW01000852 DTVW01000000
VERSION     DTVW01000852.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1254)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1254)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1254
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2053588"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1240)
                     /locus_tag="EYO87_11155"
     CDS             complement(<1..1240)
                     /locus_tag="EYO87_11155"
                     /inference="COORDINATES: protein motif:HMM:PF00353.17"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="calcium-binding protein"
                     /protein_id="HIC66535.1"
                     /translation="MGGKIALFVASGTETGITQLEFDPGRLGMTGSGTTGNAGGTARD
                     DLIVARDGTTRLFGGDGDDILVSKSQSVSMTGGAGADIFVATRFDGRIAILDYEKGVD
                     RLDLSMLGMIRSTWQLTFAPQSYGIKIFYGNSVIDIFSADGTTLAASDFGNEMFPIAH
                     YWVPELDPSTIDPSEVPSTVGRWIFGSEAPDRLLGQAGPDRIEAKAGNDTVAAGGGAD
                     TVFGGDGEDLLRGHDGADLLYGGAGRDTIFGDNQDDQIYGEAGGDYIYGGSGNDRIEG
                     GDGNDRVYGNSGDDVITGGNGNDTLWGNDGDDLLEATAGDNLLGGGGGRDTLIGGAGR
                     DMLRGGADQDLLRGGSGQDTLLGEDQNDRLYGDAGDDRLYGGPGNDMIYGGQGNDLLA
                     GEDGNDRLGGNDGNDIVQGGD"
BASE COUNT          193 a          443 c          385 g          233 t
ORIGIN      
        1 catcgccgcc ctgcacgatg tcgttgccgt cattcccgcc cagccggtcg ttgccgtctt
       61 cgcccgccag caggtcattg ccctgcccgc catagatcat gtcgttgccg gggccgccat
      121 aaagccggtc atcgcccgca tcgccataaa gccggtcgtt ctggtcctcg cccagcaacg
      181 tgtcctgtcc cgatccgcca cgcagcaggt cctggtcggc gccgccgcgc agcatgtcgc
      241 gcccggcccc gccgatcagg gtgtcccggc cgccgccgcc gccaagcagg ttgtcgcccg
      301 ccgtcgcctc cagcaaatcg tcgccgtcat tgccccaaag ggtgtcgttg ccgttcccgc
      361 ctgtgatcac gtcatcgccg gaattgccat agacgcggtc gtttccgtcg ccgccttcga
      421 tgcggtcatt gccgctgccg ccgtagatgt aatcgccgcc ggcttcgcca taaatctgat
      481 cgtcctggtt gtcgccgaag atcgtgtccc ggccggcacc gccataaagc aggtcagcgc
      541 cgtcatgtcc gcgcagaagg tcttcgccgt ctccgccgaa gaccgtgtcc gcaccgccgc
      601 cggccgcgac cgtatcattg cccgcctttg cctcgatccg gtccgggccg gcctgtccca
      661 acaggcggtc cggagcctcg gagccaaaga tccagcggcc gacggtcgag ggcacctcgg
      721 acgggtcgat ggtggagggg tccagttcgg gcacccagta atgggcgatc gggaacatct
      781 cgttgccgaa atctgatgca gccagcgtgg tgccatcggc ggaaaagatg tcaatgaccg
      841 aattgccgta gaaaatcttg atgccatagc tttgcggcgc gaaggtcagt tgccatgtgc
      901 tgcggatcat gcccagcatc gacagatcca gccggtcgac gcccttttcg tagtcgagga
      961 tcgcaatccg gccgtcaaag cgtgtggcga cgaagatgtc ggcgccggcg ccgccggtca
     1021 tcgacacgct ctggcttttc gagacaagga tatcgtcgcc gtccccgccg aacaggcgcg
     1081 tcgtgccgtc gcgggcgacg atcaggtcat cgcgggcggt gccgccggca ttgccggtcg
     1141 tgccgctgcc ggtcatgccc agccggcccg gatcgaattc aagctgtgtg attccggtct
     1201 cggtgccgct ggcgacgaac agcgcgatct tgccgcccat cacctgcgcc tcga
//
LOCUS       DTVW01000853            1178 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2053776, whole
            genome shotgun sequence.
ACCESSION   DTVW01000853 DTVW01000000
VERSION     DTVW01000853.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1178)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1178)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1178
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2053776"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1178)
                     /locus_tag="EYO87_11160"
     CDS             complement(<1..>1178)
                     /locus_tag="EYO87_11160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009465942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="IS66 family transposase"
                     /protein_id="HIC66536.1"
                     /translation="RPIPDHIPRQEIELTTGDEDCARCGGTLRRLGEDVTEELEYVPG
                     RFIVNRIVRPRLACSGCEAFTQASLPSRPIERGRPGPGLLAHVLVSKYADHLPLYRQS
                     RIFERDGLDLDRSTLADWVGKSTALLEPLADAIGRHVLAGKAIFADDTPVRMLAPGTG
                     KTATARLWTYGRDERPWGGDAPPANWYRFSPDRKGQHPKDHLSGYCGWMHADGYAGFE
                     DIYRSGDIREVACMAHVRRKFVDVHRAQGSAIANEAIRRVAQLYAVEKEARGSPPDRR
                     VEIRQAKAVPIFDGLESWLHDQLPTISGKSPLAMAIRYGLTRMKRLRPCLDHGFLELD
                     NNTAERAMRSVAVGRKNYLFVGSQTGGRAAAIAYTLIETAKLNGVDPQGWLADTRSAK
                     "
BASE COUNT          192 a          373 c          406 g          207 t
ORIGIN      
        1 acttggcgga acgggtatcg gcgagccatc cctgtgggtc cacaccattc agcttggcgg
       61 tctcgatcag ggtataggcg atggcggcgg cgcggccgcc ggtctgcgag ccgacgaaca
      121 ggtagttctt ccgtccgacg gctacggatc gcatggcgcg ctcggccgtg ttgttgtcga
      181 gttcgaggaa gccgtggtcg agacagggcc gaagccgctt catgcgcgtc aggccatatc
      241 ggatcgccat ggccaatggt gacttgccgg agatcgtcgg cagttggtcg tgaagccagc
      301 tctccaaccc gtcgaagatg ggcaccgcct tcgcctggcg gatctcgacg cgccggtccg
      361 gcggtgatcc ccgcgcctct ttctctaccg cgtagagctg tgcgacccgc cggatggcct
      421 cgttggcgat ggccgacccc tgggccctgt ggacgtcgac gaacttgcgc cggacatggg
      481 ccatgcaggc aacctcgcgg atgtcgccag accggtagat gtcctcgaac ccggcgtaac
      541 cgtcggcgtg catccagccg caatatcctg acaggtgatc cttcgggtgc tggccctttc
      601 gatccggcga gaagcgatac cagttggcgg gcggggcgtc gccgccccag ggccgctcgt
      661 cccgcccgta tgtccacagt cgcgccgttg cggtcttccc ggtgccgggc gccagcatcc
      721 tgaccggggt gtcatccgcg aagatcgcct ttccggccag cacatgccgc ccgatggcat
      781 cagcgagcgg ttccagaagt gcagtggatt tgccgaccca atccgccagc gtcgagcggt
      841 caaggtcgag cccgtcgcgc tcgaagatcc ggctctggcg ataaaggggc agatggtcgg
      901 cgtatttgga gaccagaaca tgcgccagca ggccggggcc gggacgaccg cgctcgatcg
      961 ggcgggatgg cagagaagcc tgtgtgaatg cctcacagcc ggaacaggcc aggcggggac
     1021 ggacgatccg gttcacgatg aaccggccgg gaacatattc cagttcttcg gtcacatcct
     1081 cgccgaggcg gcgaagggtt ccgccgcagc gggcacagtc ctcatcgccg gtggtcagtt
     1141 ctatctcctg gcgcggaatg tgatcgggga tgggacgg
//
LOCUS       DTVW01000854            2480 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2054844, whole
            genome shotgun sequence.
ACCESSION   DTVW01000854 DTVW01000000
VERSION     DTVW01000854.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2480)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2480)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2480
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2054844"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..667
                     /locus_tag="EYO87_11165"
     CDS             <1..667
                     /locus_tag="EYO87_11165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010442723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HIC66537.1"
                     /translation="KTVARIDALINNAAIAQVPTRKLTVDGFESQLGTNHYGHFLLNG
                     LLFDRIAESKGRIVVVASLGYNMGLKTIKFDDMNWDEGYGANTAYSQSKLAQMMFAYE
                     LQDRLAAAGRKDVKVFVCHPGSSATSLITTSGSRTMRFIWWLMTKTPMVQTAEQGSYP
                     EVMCATEEALTEQRALYGPTGRMEAVGPVGKGTLNAHAHDKAVMTRLWDESEKAVGVE
                     WKL"
     gene            887..1063
                     /locus_tag="EYO87_11170"
                     /pseudo
     CDS             887..1063
                     /locus_tag="EYO87_11170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002716709.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NIPSNAP family protein"
     gene            970..1797
                     /locus_tag="EYO87_11175"
     CDS             970..1797
                     /locus_tag="EYO87_11175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008282776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HIC66538.1"
                     /translation="MAVLCQTDASPGREGREQAARARSVLQGSCVNGEYLLVLVAGAF
                     SGGFVNGLAGFGTALFTLGWWLQVMPPTQAVSVVLVMSVVSGVQGAILVRRAIEWRQL
                     SRFLIPALIGIPIGLRLLHRIDADFLKFIVAGFMILYGGFFTLRRDLPSLRRPTPIID
                     SGIGLVGGFLGAVSGLSGALPTMWISMRDWTKEQSRAVLQPYNVVVLGISAALMAMDG
                     VYDAASLKVMAIALPVTLIAAQMGLWTFKHLSDDQFRRLLIVMMFVAGIAIPLRDMV"
     gene            complement(1794..2465)
                     /locus_tag="EYO87_11180"
     CDS             complement(1794..2465)
                     /locus_tag="EYO87_11180"
                     /inference="COORDINATES: protein motif:HMM:PF03466.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HIC66539.1"
                     /translation="MVLSVSGEAAFSGELILGAVPTTLTGLVPFVISMLKSEHAGLLV
                     RVVPGQTTELALQVERGALDAAILTRLPAVPRRHEWQEIAQENMVLLASRQSVSDDPI
                     ELLRSHAFIRFSREAVVGTMIENWLQSQGIEVKESMELANLDIIASMVYANLGVSIVP
                     VQAVPPPISLPLKRLALSPAMPRRVLGLLSRSDNVKGQVLEQLLQKLREAVEIGRFTP
                     PGTAV"
BASE COUNT          474 a          748 c          776 g          482 t
ORIGIN      
        1 gaagacggtg gctcggatcg acgcgctgat caacaacgcg gccatcgcgc aggtgccgac
       61 gcgcaaactg accgtcgacg ggttcgaaag ccagcttggc accaaccact acggacattt
      121 tctgctcaat ggtctgctct ttgaccgcat cgcggaaagc aaaggccgga tcgtggtcgt
      181 cgccagcctc ggctacaaca tgggtctcaa gaccatcaag ttcgacgaca tgaactggga
      241 tgagggctac ggcgcaaaca ctgcctattc gcagagcaag ctggcgcaga tgatgtttgc
      301 ctatgaactg caggaccggc tggctgctgc agggcgcaag gatgtcaagg tcttcgtctg
      361 ccatccgggc tcgtcggcca cgtcgctgat caccaccagc ggaagccgca cgatgcgttt
      421 catctggtgg ctgatgacca agactccgat ggtccagacg gcggaacaag gctcataccc
      481 tgaggtcatg tgcgcgaccg aagaggccct gaccgagcaa cgcgccctct acggtccaac
      541 gggccgcatg gaagcggtcg gcccagtcgg caagggtaca ctgaacgctc atgctcatga
      601 caaagccgtc atgacacggc tttgggatga gtctgaaaaa gccgtcgggg tcgagtggaa
      661 actctgaaca atggatagaa gtcggctgcc agcgcacctg tccggagtaa ggacaatggt
      721 gcgccatgca gtatctcaca gctaggggct caaagcccga attcgccgcg ttcggttcga
      781 acggctgctg tttgccgcca aagtgttatg ccgacacgcc gcgccgatcc taccgcaacg
      841 taacaagtgc tgcatgtcgg cgcggcataa tccaaacctc ggcattatga accagatcgt
      901 gcatatgtgg ggctatgaat cgcttgacga ccgtttccag cggcgcaagc agttgcaggc
      961 gtcgccggaa tggcagtcct atgccaaaca gatgcgtccc ctggtcgcga aggtcgagaa
     1021 caagctgctc gtgcccgctc cgttcttcaa ggttcctgcg tgaacggcga atatcttctg
     1081 gtcctggtgg ccggagcgtt ttcgggcggg ttcgtgaacg ggctggccgg cttcggaacc
     1141 gcgcttttca cgcttggctg gtggctgcag gtgatgccac caacccaggc cgtgtcggtg
     1201 gttctggtca tgtcggtcgt cagcggggtg cagggggcaa tccttgtgcg tcgcgcgatc
     1261 gaatggcggc agctgtcccg gttcctgata cccgcgctga tcggtattcc gatcggattg
     1321 cgccttctgc atcgcatcga cgccgatttt ctgaagttca tcgtcgccgg attcatgatc
     1381 ctctatggtg gcttcttcac gctgcggcgc gacctgccca gcctgcgtcg cccgaccccg
     1441 atcatcgaca gcggaatcgg gctggtcggc ggctttcttg gcgcggtatc gggtttgtcg
     1501 ggcgccctgc cgacgatgtg gatctcgatg cgagactgga ccaaggaaca gagccgtgcc
     1561 gtcttgcagc cctacaacgt cgtcgtcctg ggaatttcgg cagcgctgat ggcaatggat
     1621 ggcgtctacg acgcggcgtc cctgaaggtg atggccatcg ctttgccggt aacgctgatc
     1681 gccgcgcaga tgggcctgtg gacattcaag cacctgagcg atgaccagtt ccggcgcctg
     1741 ctgatcgtga tgatgttcgt ggccgggatc gcgattccgc ttcgggacat ggtctagacc
     1801 gcggttccgg gcggcgtgaa ccggccgatt tcgaccgctt cgcgcagctt ctgcaaaagc
     1861 tgctccagca cctgcccctt cacattgtcc gaccgcgaca agagccccag aacccggcgg
     1921 ggcatggccg gggaaagggc aaggcgcttc aagggcagac tgatcggagg cgggaccgcc
     1981 tgcaccggaa cgatcgaaac ccccagattt gcatagacca tgctggcaat gatatcgaga
     2041 ttggccagtt ccatgctttc cttgacttcg atgccttgcg actgcagcca gttttcgatc
     2101 atcgtgccga ccacggcttc gcgcgaaaac cggatgaagg catggctccg aagcagctcg
     2161 atcgggtcgt cgctgacaga ttgcctggag gcgagcagca ccatgttctc ttgggcgatt
     2221 tcctgccact cgtgccgtcg cggaaccgcc ggcagacggg tcaggatcgc cgcgtccagc
     2281 gcgccgcgtt cgacctgcaa ggccagttcc gtggtctggc ccggcacgac gcgaaccagc
     2341 agcccggcat gttcggattt cagcatggaa atgacgaacg gaaccaggcc ggtcagcgtc
     2401 gtcggcacgg cgcccaggat cagttcgccg ctgaacgccg cttcgcccga cacggacagg
     2461 accatgccgt cataggcggc
//
LOCUS       DTVW01000855            1167 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_20565, whole
            genome shotgun sequence.
ACCESSION   DTVW01000855 DTVW01000000
VERSION     DTVW01000855.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1167)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1167)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1167
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_20565"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..310)
                     /gene="folK"
                     /locus_tag="EYO87_11185"
     CDS             complement(<1..310)
                     /gene="folK"
                     /locus_tag="EYO87_11185"
                     /EC_number="2.7.6.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR01498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HIC66540.1"
                     /translation="MEHRAYIAIGSNLGDREDHISRALSAIAELPDTRVTGRSSLYET
                     EPHGRTRNWFLNAVVEIVTGFEAKDLLKELLAIETAVGRRRGAKTKAAKNQNVSREID
                     L"
     gene            complement(519..>1167)
                     /locus_tag="EYO87_11190"
     CDS             complement(519..>1167)
                     /locus_tag="EYO87_11190"
                     /EC_number="1.17.1.8"
                     /inference="COORDINATES: protein motif:HMM:PRK00048.2-5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate reductase"
                     /protein_id="HIC66541.1"
                     /translation="GVTIGDDLKASWTKGAVIVDFSSPAATLAQLEFAAGNGAPVVVG
                     TTGLDPEQRARAEELAARTATVMASNMSVGITVLDSLVEQAVKALGGGFDCEIVELHH
                     RLKKDAPSGTALSLAATAAAARGLELPASLATAREGMIGERPDDEIGVVALRGGDAVG
                     DHTVMLVGTGERLELTHRAASRDCLAGGALRAALWVAGRQPGLYGMRQVCGLEPA"
BASE COUNT          169 a          380 c          392 g          226 t
ORIGIN      
        1 cgaggtcgat ctcgcgcgac acgttctggt tcttagcggc cttggttttt gcgccacgcc
       61 tgcggcccac ggcggtttcg atggccagca gttccttgag caggtccttg gcctcgaagc
      121 cggttacgat ctcgaccacc gcgttaagaa accagttgcg ggtacggccg tggggttcgg
      181 tctcgtacag ggagctgcgg ccggtgaccc tggtgtcggg cagctcggcg atagcggaca
      241 gtgcccgcga aatgtggtct tctcggtcgc cgaggttgct gccgatggcg atgtaggcgc
      301 ggtgttccat taacgcacgc ggctgtagag gggtgaaact cgctggggct ctacggtagt
      361 ctgtgagggg cggcccgtga aatctccgtg tttaccaaca gttacagcca agggcagggt
      421 ttatcgtgaa tcgccacagc ctgcaaatcg gctgttcggg tgtcgggcgg gttattcagg
      481 gcttccgggg ggtggcggcc aaccgtccgc gaccggcctc aagccggctc aaggccgcag
      541 acctgccgca ttccgtacag gcccggctgc cgtccggcta cccatagcgc cgccctgagc
      601 gcgccgccag ccaggcagtc acgcgacgcg gccctgtgcg taagttcgag tctttcgccc
      661 gttcccacga gcatgacggt gtgatcgccc accgcgtcgc cgccgcgaag tgcgaccacg
      721 cctatttcgt cgtccggcct ttcgccgatc atgccttccc tggccgttgc cagggaggct
      781 ggcagctcca gccctcgggc ggcggcagcg gtagcggcca gcgacagcgc agttccgctg
      841 ggggcgtcct tcttgaggcg gtggtgcagc tccacgattt cgcaatcaaa accgcccccg
      901 agcgctttga ccgcttgctc gacgaggctg tcgagcaccg tgatgcccac gctcatgttt
      961 gatgccatta cggtagccgt gcgtgcggcg agctcttcgg cgcgcgcgcg ctgttccggg
     1021 tcgagcccgg tcgtgcccac aactaccggc gcgccgttgc cggccgcgaa ctcgagctgg
     1081 gccagcgtgg cggcgggcga actgaaatcg actatcaccg ctcccttggt ccacgaggcc
     1141 ttcaggtcat cgccgatggt gacgccg
//
LOCUS       DTVW01000856            1795 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2057009, whole
            genome shotgun sequence.
ACCESSION   DTVW01000856 DTVW01000000
VERSION     DTVW01000856.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1795)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1795)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1795
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2057009"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            1300..>1795
                     /locus_tag="EYO87_11195"
     CDS             1300..>1795
                     /locus_tag="EYO87_11195"
                     /EC_number="6.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018001288.1"
                     /note="Acs; catalyzes the conversion of acetate and CoA to
                     acetyl-CoA; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-coenzyme A synthetase"
                     /protein_id="HIC66542.1"
                     /translation="MSTETIEKHRIPPGFENAHVKPADYDRLYAESIRDPEAFWAREG
                     KRLDWIEPYTKVKNTDFTFGKVNIKWYEDGVLNVSVNCVDRHLDKRGEQTAIIFEPDD
                     PKDDARHITYRQLSENVNRMANVLLSQGVMRGDRVVIYLPMIPEAAYAMLACARIGAI
                     HSIVF"
BASE COUNT          399 a          544 c          534 g          318 t
ORIGIN      
        1 aattcctgtc cagcgagatc gatctgcccg cgcagcagcg cagctcgatc gcgatcaatg
       61 tcaatgccaa cgacaccaag atccgcgaca accgcttcgt gcgtttcgcg catttcatgg
      121 tcgccaatgg cggcgggcat atcatcagcg gcaatcactg gttccagggc gacggctcgg
      181 gcgaggggct gcgctatgcc gggctggtgc tgacgctgac caacgtgcag accacgatca
      241 ccggaaacta catcgacaac gcctccatcg aatggaccaa cgaacacagc gcgcggcccg
      301 atttcagcgg cagccagttc agcttcggtg gcctgaccat caccggcaat acctgcctgt
      361 gttccaatac cgcggcctgg ttcacctggc tgacggtcaa gccctatggc agcggccatt
      421 tcatccacgg cctgaccgta tcgggcaacg tgttcaaggc gctttacggc aatgtggacc
      481 ggatcgacag ggtcgatacc tcgatcgcgg atctggatta caacaacatg cggaacgtcc
      541 agttcgaggg caataccttc aacggcgtaa acaactatgt ctcgaacccg ctgctggtcc
      601 agcacgagca gaacagcacc tcgcggacat ggaatctgcc ggtgatcgag gggctgccgt
      661 tccaggcctg ggcaaaatcc gtgcagtcgg tggtcgccga agggccgatc acggacggct
      721 cgaacaaccg catcgacgcg gcgccgtggg tgcaggccga gatcggcagc acgaggcgac
      781 agatccggct gaactgggcc actccggtca agggcaagat ttcggtctat gcgcgcatgg
      841 accggccgca gtaaaatccc atccgaccgt cctcggatac gccgccgcga gccatcgcgg
      901 cggctttttc atacgccggg atccgcgggc gtcagcccta ggccgcgccg aaaccgacat
      961 tcggcagggc gcgctcgcgc atcatctgcc agaaggagaa atccggcaag tcgacgaagg
     1021 ccgcggcgtg ccgatgggca ttcaaccagt gatcgcgcag ggccgcatcg gatcgcgggt
     1081 catggcagag tcccgaagcc cactccggcg aatgtgaaca atttacattt tacatctgaa
     1141 atccgtcaat aactttacaa atttctcgtt atataaaaaa tgcttaactt gaagtgccgt
     1201 atatgattaa catctgccac gggggtgctt tcagcgccgc cggccggtgg ggaccggcaa
     1261 ccggacaagg gacggaaatg gctgtaagga gggcatgtcg tgagcaccga aaccattgaa
     1321 aagcatcgaa ttccgcccgg gttcgaaaac gcgcacgtca agcccgccga ttacgaccgt
     1381 ctctatgccg aatcgattcg tgatccggaa gccttctggg cccgcgaggg caagaggctg
     1441 gactggatcg agccctatac caaggtcaag aacaccgatt tcaccttcgg caaggtcaac
     1501 atcaagtggt acgaggacgg cgttctgaat gtcagcgtga attgcgtcga ccggcatctg
     1561 gacaagcgcg gcgagcagac cgcgatcatc ttcgagcccg acgatccgaa ggacgacgcc
     1621 cggcacatca cttacaggca attgtccgaa aacgtgaacc ggatggcgaa cgtgctgctg
     1681 agccagggcg tcatgcgggg cgaccgggtc gtgatctatc tgccgatgat ccccgaggcc
     1741 gcctatgcga tgctggcctg cgcgcggatc ggggccatcc attccatcgt tttcg
//
LOCUS       DTVW01000857            4328 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2058316, whole
            genome shotgun sequence.
ACCESSION   DTVW01000857 DTVW01000000
VERSION     DTVW01000857.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 4328)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4328)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4328
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2058316"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1170
                     /locus_tag="EYO87_11200"
     CDS             <1..1170
                     /locus_tag="EYO87_11200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020039629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyanophycin synthetase"
                     /protein_id="HIC66543.1"
                     /translation="TGTNGKTTTTRLTTHILRQAGHSVGMGCTGTVEIDNNVILRGDY
                     SGPAAAQAVLREPTVEHAVLEVARGGIMRRGLGFDECDVGVLLNIASDHLGERDIHTL
                     EDLARCKTVVVDAVKREGGYCVLNADDPLVMEHGTYWARGEIIYFTMDPQNPALTRHL
                     DDLGMVLTVKHGKIVLLRGKVTVEIVEVNDVPIAFEGHAPFNVQNAMAAAAAALAHGI
                     EIDDIRAGLLTFHPTPAQMPGRTNYFEADGVKCLIDYGHNVPALIALEPLVNGLATQR
                     KIAVATAPGNRRDEDLAALGAQLARMCDRLYVYETDARGRETGETAGMIHDGAAGAGT
                     SAHVETIMDEHEAVAKAIDEAKPGDFLLLLVDDIEGTTERLKGRSFPTQAELARA"
     gene            1256..2554
                     /locus_tag="EYO87_11205"
     CDS             1256..2554
                     /locus_tag="EYO87_11205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020039628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HIC66544.1"
                     /translation="MTRNVFVIGLDDLNAERLKRLRGVEDVEFHQLLTPMQVSETQEF
                     DIPAMLKEAEDRLNAFDGSIDAIVGYIDFPVSTMLPLLCQKFGTRNSSLESMLKCEHK
                     YWSRKVMAEVVPDHVPKFTAFDPFDENALSRIGEADLRFPFFIKPIKSSGSRLGFRID
                     SPEDFEYATEKLRAGIGQISEPFNFVMEQADLPDDIKAVEGHYCMAEQVIGGRQCTVE
                     GYVHEGEVVPYGTVDSIRYPQVLSFFYYLYPSTLPSRVQDKMHQITRIVMDHIGYDNA
                     GFNIEYYWDEVQNKIWLLEINTRIAQSHCDLFEMVDGVSHQQVTIDLGLGRRPDMPRG
                     EGPQEVAAEFFYRVFFTDATVARVPSRAEIEVAAEQVAGTRISSYVSRDMKLSELPEQ
                     DAYSFAVASVWMGAQKPSKLLWNYEQVMKRLDYAFTDIAE"
     gene            2636..>4328
                     /locus_tag="EYO87_11210"
     CDS             2636..>4328
                     /locus_tag="EYO87_11210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020039627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CocE/NonD family hydrolase"
                     /protein_id="HIC66545.1"
                     /translation="MKVDTELPLTVRETEHAEIAMPDGTRLAARIWMPEDAEARPVPA
                     ILEYIPYRKNDKTLERDHARAPWLAAQGYAYVRVDLRGSGESEGVMQDEYTPVELQDG
                     CDVIAWIADQAWCDGGVGIVGISWGGFNGLQIAALRPPALKAVVTICSTDDRYADDIH
                     YMGGTLLCEQLSWASVMFGINTLPPDPAHVGDRWRDMWTARLDGSGLWLETWLAHQTR
                     DPFWKHGSVCEDFSRIQLPVYAVSGWADGYCRSVFRLVENLKGPVKGIVGPWAHRYPH
                     LGEPGPAIDWLTEETRWWDHWLKGRDTGIMDEPPLRLYLQDHAAPRTHYAHRDGRWIT
                     EPSWPSPNVTRTRFALGSDGQMIRDGAGLPGAALTIRSPLWVGMQAGKWCSYAHPGDQ
                     PGDQRRDDAGSLTFQTAPLDEDLDIAGDARLTLALRADRPVAQVAVRLVDVAPDGAAT
                     RVSYGLLNLTHRDSHEQPAALEPGRDYVTEIPLKHVAQTFRRGHRIRLAVSSSYFPLA
                     WPTPEPVTLTILPGQSQLDLPIRASDGLSVPDFAPPRAGRPLDATYHVAPAAEWNV"
BASE COUNT          820 a         1369 c         1388 g          751 t
ORIGIN      
        1 accggcacca acggcaagac cacgaccacg cgcctgacga cgcatatcct gcggcaggcc
       61 ggtcattcgg tcggcatggg ctgcaccggc acggtcgaga tcgacaacaa cgtgatcctg
      121 cgcggcgact attccgggcc ggcggcggcg caggccgtgc tgcgcgaacc cacggtcgaa
      181 cacgcggtgc tggaggtggc gcgcggcggc atcatgcgcc gtggcctggg ctttgacgaa
      241 tgcgatgtcg gcgtcctgct gaacatcgcc tccgatcatc tgggcgagcg tgacatccac
      301 acgctggaag accttgcccg ctgcaagacg gtggtcgtgg atgcggtaaa gcgcgaaggc
      361 ggctattgcg tgctgaacgc cgatgatccg ctggtcatgg aacacggcac ctattgggcg
      421 cgcggcgaga tcatctattt caccatggat ccccagaacc cggcgctgac ccggcatctg
      481 gacgatctgg gcatggtatt gaccgtcaag catggcaaga tcgtgctttt gcggggcaag
      541 gtcaccgtcg agatcgtcga ggtcaatgac gtgccgatcg cgttcgaggg acatgcgccc
      601 ttcaacgtgc agaacgccat ggccgcggcg gccgctgccc tggcccatgg aatcgagatc
      661 gacgatatcc gcgcgggtct tctgactttc catcccacgc ctgcgcagat gccgggccgc
      721 acgaactatt tcgaggcgga cggcgtcaag tgcctgatcg actatggcca taacgtgccg
      781 gcgctgatcg cgctggaacc gctggtcaac gggctggcca cgcagcgcaa gatcgccgtc
      841 gccaccgcac cgggcaatcg ccgggacgag gatcttgcgg ccctgggcgc gcaactggcc
      901 cggatgtgcg acaggcttta cgtctatgaa accgatgcac gcgggcgcga gaccggcgaa
      961 accgccggaa tgattcacga cggtgcggca ggtgccggca cctccgcgca tgtcgagacg
     1021 atcatggacg agcacgaggc cgtcgcaaag gccatcgacg aggccaagcc gggggatttc
     1081 ctgctgctgc tggtcgatga catcgagggc acgacagaac ggctcaaggg tcgaagcttc
     1141 ccgacgcagg ccgaactggc ccgcgcctga cccgcttgcg gaccgggcca cgggggcaag
     1201 ggcgcgtcgg ccgggctgcc catcgcgccg cagacccaac aggaaggacg aaacaatgac
     1261 cagaaacgtc ttcgtcatcg gactggacga cctgaacgcc gaacgcctga aacggctgcg
     1321 cggcgtggaa gacgtggaat ttcaccagct tctgaccccg atgcaggttt ccgaaacgca
     1381 agaattcgat attccggcga tgctgaaaga ggccgaagac aggctgaatg ccttcgacgg
     1441 atcgatcgac gccatcgtcg gctatatcga ctttcccgtc tcgaccatgc tgccgctgct
     1501 gtgccagaaa ttcgggacac gcaattcctc gttggaaagc atgctgaaat gcgaacataa
     1561 atactggtcg cgcaaggtca tggccgaggt cgtaccagac catgttccca agttcaccgc
     1621 cttcgatccc ttcgatgaga acgcattgtc aaggatcggc gaggccgatc tgcgttttcc
     1681 gttcttcatc aagccgatca agtcctccgg ctcgcggctg ggatttcgca tcgacagccc
     1741 cgaagatttc gaatacgcga ccgaaaagct gcgcgccggg atcggccaga tctcggaacc
     1801 gttcaatttc gtcatggagc aggcggacct gcccgacgac atcaaggcgg tggaaggcca
     1861 ttactgcatg gccgaacagg tgatcggcgg gcgacaatgc acggtcgagg gatatgtcca
     1921 cgagggcgag gtcgttccct atggcaccgt cgattccatc cgctatccgc aggttctcag
     1981 cttcttctac tatctttatc cttcgaccct gcccagccgc gtgcaggaca agatgcacca
     2041 gatcacgcgc atcgtcatgg atcatatcgg ctatgacaat gccggcttca acatcgaata
     2101 ttactgggac gaggtgcaga acaagatctg gttgctggag atcaacacgc gcatcgcgca
     2161 gtcgcattgc gacctgttcg agatggtcga cggcgtcagc caccagcagg tgaccatcga
     2221 ccttggcctt gggcgccgcc cggacatgcc caggggcgag ggcccgcaag aggtggcggc
     2281 ggaattcttc tatcgggtgt ttttcaccga cgcgaccgtg gcccgcgtgc cctcgcgcgc
     2341 cgagatcgaa gtcgccgccg aacaggtcgc cgggacccgc atctcgtcct atgtgtcaag
     2401 ggacatgaaa ctgtctgaac tgcccgaaca ggacgcctac agctttgccg tggcctcggt
     2461 ctggatgggt gcgcaaaagc cctccaaact tctgtggaat tacgagcagg tgatgaaaag
     2521 actggactac gcgttcaccg acatcgccga atagcccgcc cgggcgatgg acttcggcag
     2581 gatccgcgga gataagcggg caagccgcca tgccctgcct acagcgagat cattcatgaa
     2641 ggtcgatacc gaacttcccc tcaccgtgcg ggaaacagaa catgccgaga tcgcgatgcc
     2701 cgatggcacg cggcttgcgg cgcggatctg gatgcccgag gacgccgagg cgcggccggt
     2761 gcccgcgatc ctcgaataca ttccgtatcg caagaacgac aagacgctgg aacgcgacca
     2821 cgcgcgcgcg ccgtggctgg cggcgcaggg ttatgcctat gtccgcgtcg atctgcgcgg
     2881 cagcggcgaa tccgagggcg tgatgcagga cgaatacacc ccggtcgagt tgcaggacgg
     2941 ctgcgacgtg atcgcgtgga tcgccgatca ggcctggtgt gacggcggcg tgggtatcgt
     3001 gggaatctcc tggggcggtt tcaacgggtt gcagatcgct gcgctgcgcc cgccggcctt
     3061 gaaagccgtg gtgaccatct gttcgaccga tgaccgctat gccgacgaca ttcactacat
     3121 gggcggcaca cttctgtgcg agcagctgtc ctgggcctcg gtgatgttcg ggatcaacac
     3181 gctgccaccc gaccccgccc atgtcggcga ccgctggcgc gacatgtgga cggcgcggct
     3241 tgacggttcg ggcctctggc tcgaaacctg gctggcacat cagacccgcg acccgttctg
     3301 gaagcatggc tcggtctgcg aggatttttc ccggattcag cttccggtct atgccgtcag
     3361 cggctgggcc gacggctatt gccggtcggt gtttcgattg gtcgagaatc tgaaaggccc
     3421 ggtcaagggc atcgtcgggc catgggcgca cagatatccg catcttggtg agcccggacc
     3481 ggccattgac tggctgaccg aagagacgcg ctggtgggac cattggctca agggccggga
     3541 caccggcatc atggatgagc cgcctctgcg gctttacctt caggatcatg ccgccccccg
     3601 cacccattac gcccaccggg acggccgctg gatcaccgaa ccttcctggc catcgcccaa
     3661 tgtgacccgg acaaggttcg ccctgggatc ggacgggcag atgatccgcg acggtgccgg
     3721 tctgcccggc gccgcgctga ccatccgttc gccgctttgg gtcgggatgc aggccgggaa
     3781 atggtgctct tatgcgcatc cgggcgatca gccgggcgat cagcgtcgcg acgatgccgg
     3841 aagcctgact ttccagaccg cgccgctgga cgaggacctg gacatcgcgg gggacgcgcg
     3901 tctgacgctt gcgctgcggg ccgaccgacc ggtggcgcag gtcgcggtgc gactggtgga
     3961 cgtggccccc gacggcgccg ccacgcgggt cagctatggt cttctgaacc tgacccaccg
     4021 ggacagtcat gaacagcccg cagcgctgga accgggccgg gattatgtga cagagatacc
     4081 gctgaagcac gtcgcgcaga cattccgcag agggcaccgg atccggctgg ccgtttccag
     4141 cagctatttc cccctggcct ggccgacacc ggaacccgtg acgctgacca tcctgcccgg
     4201 ccaatcgcaa ctcgacctgc cgatccgtgc gtctgatggt ctgtcggtcc ccgatttcgc
     4261 cccgccacgt gcgggccggc cgctggacgc cacctaccat gtggcgcccg ccgccgaatg
     4321 gaacgtcg
//
LOCUS       DTVW01000858            1283 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2059153, whole
            genome shotgun sequence.
ACCESSION   DTVW01000858 DTVW01000000
VERSION     DTVW01000858.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1283)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1283)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1283
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2059153"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            2..>1283
                     /locus_tag="EYO87_11215"
     CDS             2..>1283
                     /locus_tag="EYO87_11215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009503123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl/propionyl-CoA carboxylase subunit alpha"
                     /protein_id="HIC66546.1"
                     /translation="MSFTRVLIANRGEIARRIQRGCRKLGLENVAVFSEADRDAPFVA
                     EADHAVCIGGAAPSDSYLNVEAILEAARATGAGAVHPGYGFLSENAGFAAAVEAAGLV
                     FIGPEPDAIARMGSKIEAKAAAEAAGVPVLPGYRGEDQSDARLLQEAEALGTPFLVKA
                     SAGGGGRGMRLVSDLGDAPEAIASARAEAQSAFGDPAVFLERYAPRARHVEVQVLGDT
                     HGTVLHLGDRDCSLQRNHQKLIEEAPAADLPEAVRDRMRAAAVRLALAIGYRSAGTVE
                     YLYDPGRGEYYFLEMNTRLQVEHPVTEAITGIDLVEWQLRIARGEPLTLAQSDVKFDG
                     HAIEIRIAAENPAENFRPETGEISLWAPPAGVRLDTGVEAGSVVSHHYDSMIAKLIVH
                     APDRAGAIRQAVVAMDAFAVGGVGLNLAYQRALLT"
BASE COUNT          207 a          419 c          438 g          219 t
ORIGIN      
        1 aatgagcttc acccgcgttc tgatcgccaa ccggggcgag attgcccggc gcatccagcg
       61 cgggtgccgc aaactggggc tggaaaacgt agcggtgttc tcagaggcgg accgcgacgc
      121 gcccttcgtg gccgaggccg atcatgccgt ctgcatcggc ggagccgccc cgtcggacag
      181 ttatttgaac gtcgaggcca tccttgaggc cgcgcgggcg acgggcgcgg gtgcggtgca
      241 cccgggctat ggttttctgt ctgagaatgc cggtttcgcg gcggcggtcg aggcggcggg
      301 ccttgtgttc atcgggccgg aacccgacgc tatcgcgcgg atgggctcca agatcgaggc
      361 caaggctgcc gccgaagccg caggcgtgcc cgtcctgccc ggctatcgcg gcgaggatca
      421 gtccgacgcg cgcctgctgc aagaggccga ggcgcttggc accccctttc tggtcaaggc
      481 cagcgccggc ggcggcggac gcgggatgcg gcttgtctcc gatctgggcg acgcacccga
      541 agcgattgca tctgcccggg ccgaagcgca gagcgccttc ggcgatccgg cggtgttcct
      601 cgaacgctat gcgccccgtg cccgccacgt cgaagtgcag gttctgggcg acactcacgg
      661 caccgtgctg catctgggcg accgcgattg ttcgctgcaa cgcaaccacc aaaagctgat
      721 cgaagaagcc cccgccgccg atcttcccga ggctgtgcgc gaccgcatgc gtgctgcagc
      781 ggtgcggttg gcgctggcga tcggctatcg ctccgccggg acggtggaat acctctatga
      841 ccccgggcgc ggtgaatact actttctgga aatgaacacc cgcttgcagg tcgaacaccc
      901 cgtgactgag gcaatcaccg gcatcgacct tgttgaatgg cagttgcgca tcgcgcgggg
      961 cgagccgctg acactggcgc aatcggatgt gaaattcgac gggcacgcga ttgaaatccg
     1021 catcgccgcc gaaaacccgg ccgagaattt ccgccccgaa acgggcgaga tcagcctttg
     1081 ggctccgccc gccggcgtgc ggctcgatac cggggtcgag gcaggctcgg tcgtcagcca
     1141 ccattacgat tcgatgattg ccaagctgat cgtccacgcg ccggaccggg ccggtgcgat
     1201 ccgtcaggcg gtcgtcgcaa tggatgcctt tgccgtcggt ggcgtcggtc tgaacctggc
     1261 ctatcagcgc gcgttgctga cac
//
LOCUS       DTVW01000859            2944 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2059268, whole
            genome shotgun sequence.
ACCESSION   DTVW01000859 DTVW01000000
VERSION     DTVW01000859.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2944)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2944)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2944
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2059268"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            640..807
                     /gene="rpmG"
                     /locus_tag="EYO87_11220"
     CDS             640..807
                     /gene="rpmG"
                     /locus_tag="EYO87_11220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011454349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HIC66547.1"
                     /translation="MAKPTTIKIRLNSTAGTGHFYVTKKNARTMTEKMTVRKYDPVVR
                     QHVEYKEGKIK"
     gene            complement(1010..1510)
                     /locus_tag="EYO87_11225"
     CDS             complement(1010..1510)
                     /locus_tag="EYO87_11225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_351621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HIC66548.1"
                     /translation="MAGARLDDIDRKILAELQADGRMTNVELARRVGISAPPCLRRVR
                     TLEEMGYIRGYHADIDPRELGFEVQVFAMVRLAAQSERDLSAFETLVKAWPLVRECHM
                     LNGEIDFILKCVSPDLPTFQRFLTNSLTAAPNVASVKTSLVIRAAKDEPSVPFEVVEE
                     RVREAG"
     gene            1656..2654
                     /gene="trxB"
                     /locus_tag="EYO87_11230"
     CDS             1656..2654
                     /gene="trxB"
                     /locus_tag="EYO87_11230"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_351620.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HIC66549.1"
                     /translation="MSDDTHVKLLIIGSGPAGYTAAVYGARAMLNPMLIQGMQPGGQL
                     TITTEVENWPGETEIQGPDLMVKMESHARAMGAEVVTDIVTKLDLGRRPFTAECDSGA
                     RITADAVILATGAQARWLGLPSEERFKGFGVSACATCDGFFYRGREVLVVGGGNTAVE
                     EALFLTKFASKVTLVHRRDSLRAEKILQNRLFKNPKVEIVWDHELAEVTGTEDPLGVS
                     GAVLTSVKDGGTRRIAVDGVFIAIGHAPSSELVKDQLDLHSGGYVKVEAGSTRTSIPG
                     VFAAGDLTDHIYRQAVTSAGMGCMAALDAEAWLAERDEAGEPDPAGAELPEQAPAG"
BASE COUNT          538 a          923 c          955 g          528 t
ORIGIN      
        1 agcgcgcgca gcgccgcggt ctctgatagg ctgtccttgg tcatggttga tctcctcggt
       61 caaaggtcgg gtcggcaaac caaaccttgg ccgaagaaca gccgtggccg ccaagcgacc
      121 cgcacggacc tcgcttcgct acgcgaaggc tccgcgctgc ccgcgctacc tgcgggaact
      181 acaccaactg tcgggacacc gcttgtgcaa ggatcgacca tagtccattt cgctgtgtct
      241 accccgtcac aggtgcccga aaatcgaccg taactccccc caaggcgctt acacctgttg
      301 gtatttttgt tggtgtcgac gtaatttccg cttttttcaa tgctgtcgcc ttccctacgg
      361 gctgccaccg tcacctcttt ctcctccgcg cctcgaacag cctgttgctg tttgtgccgc
      421 attgaacgcg ctgatgtgcg gcatgagcgg cttggaaacc ggctcagcaa tcgggtcggc
      481 gctgttctgc atgatttgca tagccgccaa tcgcttgccg gatcgggtga attgcgggtg
      541 gttttcggtt gacttcgggc gggcggcggc taaaaggcgg gcttcaaacg aattccacgg
      601 ggtttgcgcc gcgctttccc cgaagcagga gcagtaacca tggcgaagcc gacgaccatc
      661 aagatccggc tgaactcgac cgccgggacc ggccacttct atgtgaccaa gaagaatgcc
      721 cggacgatga ccgaaaagat gaccgttcgc aaatacgatc cggtcgtgcg gcagcatgtc
      781 gaatacaagg aaggcaagat caagtagcga tcatgcctgt tgcccggggc caagcccgac
      841 ttcgatagaa gccgtcaggc gccgcgcgtc gggacgtccc ggaattcgtc cggaaaccgg
      901 aagggtgttg cgattgcgcg atgccctttt tccgtattcc gcgcggcaat tccggccacg
      961 ggtggcggcg gttgttcagc ggttggccgg gaaccgggca tcggcgccgc tatccggcct
     1021 cgcgaacccg ctcctcgacc acctcgaaag ggaccgaggg ctcgtccttg gctgcgcgga
     1081 tgaccagcga ggtcttgacg ctggccacat tcggggccgc ggtcaggctg ttggtgagaa
     1141 accgctggaa cgtgggcaga tcgggcgaga cgcatttcag gatgaaatcg atctcgccgt
     1201 tcagcatgtg acattcgcgc accagcggcc atgccttcac cagcgtctcg aaggccgaaa
     1261 ggtcgcgttc cgattgcgcc gcaagccgga ccatcgcgaa gacctgaacc tcgaaaccca
     1321 gttcgcgggg gtcgatatcg gcgtggtagc cgcggatata gcccatctct tccagcgtcc
     1381 ggacacgccg caggcagggc ggggccgaga tgcccacgcg acgcgccagt tcgacattgg
     1441 tcatccggcc atcggcctgc aattcggcca ggatcttgcg gtcgatgtcg tccagtctcg
     1501 cgcctgccat gctgctcttt cttgaaacgg gttccggcgt tgcaggaaac tacaatgcgg
     1561 cccgcgttta cgcaacattc tttccggcct cggccatgtt gcacaagccg aaccaaggga
     1621 ttacctgatg cctcaaatcg aaagcggggc gcaagatgag tgacgacacg catgtgaaac
     1681 ttctgatcat cgggtcggga ccggcgggct ataccgcggc cgtctatggt gcccgcgcga
     1741 tgctgaaccc gatgctgatc caggggatgc agccgggcgg ccagctgacc atcaccaccg
     1801 aggtcgagaa ctggccgggc gagaccgaaa tccagggtcc cgacctgatg gtgaagatgg
     1861 agtcccatgc cagggcgatg ggcgccgagg tcgtcaccga tatcgtcacc aagctggatc
     1921 tgggccgccg gcctttcacg gccgaatgcg acagcggcgc gcggatcacg gcggatgcgg
     1981 tgattctggc gaccggcgca caggcgcgct ggctggggct gcccagcgag gaaaggttca
     2041 aggggttcgg cgtcagcgcc tgcgcgacct gcgacgggtt cttctatcgc ggccgcgagg
     2101 tgctggtcgt cggcggcggc aatacagcgg tcgaggaggc gctgttcctg accaaattcg
     2161 cctcgaaggt cacactggtc catcgccgcg acagcctgcg ggcagaaaaa atcctgcaaa
     2221 accggctatt caagaacccg aaggtcgaga tcgtctggga tcacgaactg gccgaggtga
     2281 cggggaccga ggacccgctt ggggtcagcg gcgccgtgct gacatccgtc aaggatggcg
     2341 ggacgcggcg gatcgccgtg gacggggttt tcatcgccat cggccatgcg ccgtccagcg
     2401 aacttgtcaa ggaccagctt gacctgcatt ccggcggcta tgtgaaggtc gaggccgggt
     2461 ccacgcggac ctcgatcccc ggcgtcttcg cggcgggcga cctgacagac cacatctatc
     2521 ggcaggccgt gaccagcgcc ggaatgggct gcatggcggc gctggacgcc gaagcctggc
     2581 tggccgaacg tgacgaggcg ggcgaacccg atccggccgg cgccgaactg cccgaacaag
     2641 ccccggccgg gtgatctgcc ggcttgcctg cgggtatcgt cggtcaggcg gcgggacgcg
     2701 cccctgcgct gttggcgcga aaagtgcggg cccaggttga aacttgcctg cggggcggct
     2761 aagcgcgacg ggttcgtagc cggccggttc tcggctgcct gcccactttc gttcagccat
     2821 ccgagccctt gcacatgacc catccgaacc agacgccgat ccccgagctt tatgtctcgc
     2881 ccgaagccgc cgccgcattg aaggacgagg cgggccacat gcccagctgg gatctgacgc
     2941 agcg
//
LOCUS       DTVW01000860            2451 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2059282, whole
            genome shotgun sequence.
ACCESSION   DTVW01000860 DTVW01000000
VERSION     DTVW01000860.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2451)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2451)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2451
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2059282"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            155..826
                     /locus_tag="EYO87_11235"
     CDS             155..826
                     /locus_tag="EYO87_11235"
                     /inference="COORDINATES: protein motif:HMM:PF02630.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCO family protein"
                     /protein_id="HIC66550.1"
                     /translation="MRAMTGGAKGNGMTEAKIILAAAAAAAVLSVAAAGGAYLALSGS
                     DERIARCDGGDGAGGLDTLGTEFTLTRDDGTRVSDKQVFDRPTLLYFGYTSCPDVCPL
                     DNARNAEAVDILKSQGRDAQSIFVTVDPGRDTPEVLARFADSFGGAVIGLTGSDAEIA
                     AVSKGWRIYSRANGGKNDRDYMVDHASNTYLVMPGNRTVDLFPREDSAEKVAATVGCN
                     LDVAA"
     gene            894..1448
                     /locus_tag="EYO87_11240"
     CDS             894..1448
                     /locus_tag="EYO87_11240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_351562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ActR/PrrA/RegA family redox response regulator
                     transcription factor"
                     /protein_id="HIC66551.1"
                     /translation="MAEDIAARIGADPSLLLVDDDELFVTRLARAMEKRGFATRTALS
                     VSEAMRMIREQAPAFAVIDLRLEDGNGLDVVESLRETREDARIIVLTGYGAIATAVAA
                     VKMGATDYLAKPADANDVTSALLAVGDLLPPPPENPMSADRVRWEHIQRVYEQCDRNV
                     SETARRLHMHRRTLQRILAKRGPR"
     gene            1527..1838
                     /locus_tag="EYO87_11245"
     CDS             1527..1838
                     /locus_tag="EYO87_11245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="H-NS histone family protein"
                     /protein_id="HIC66552.1"
                     /translation="MNVDFDKMTLKEMRDLRAKLDRAISSYEDRKRREALAAVEEAAR
                     EHGFNLAELTGGKPRRAGTVPPKYVNPKDPTMTWTGRGRKPRWVQESLEGGKQLEDLL
                     I"
     gene            complement(1894..>2451)
                     /locus_tag="EYO87_11250"
     CDS             complement(1894..>2451)
                     /locus_tag="EYO87_11250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD family hydrolase"
                     /protein_id="HIC66553.1"
                     /translation="FDIEIEDIAHGLAFVARWNGQTHGDWPYSVAGHSLLVEDIFCRL
                     DPRADPAARLAALLHDAPEYVIGDMISPVKSALGQDYGAMDERLTAAIHRRFGLPASL
                     PAALKKRIKTADRISARLEAVQIAGFDETEARKLFPVPGEQILTRLKIDLSPPAKVRA
                     AFLEQFSAIMRALDQTGNSDEKGKY"
BASE COUNT          478 a          727 c          805 g          441 t
ORIGIN      
        1 cagcgcagca gggcaagggt gcggatgcgg atcggttcgg ggtcgcgcgg aagggcggcc
       61 gggaaggcgg cgcttttcac ggccggatct gcgctcatct ggggcctcgc tgcggcgttc
      121 ggcgacttga tacgcgtcgg ggaatgcgcg atcaatgcgc gcgatgaccg gtggggcgaa
      181 aggaaacggc atgaccgagg ccaagatcat cctggctgcc gccgcggctg ccgccgtgtt
      241 gtccgtcgcg gcggcggggg gcgcctatct tgcattgtcc ggcagcgacg aacgcatcgc
      301 acggtgtgac ggcggcgatg gcgcgggtgg gctggacacc ctgggcaccg aattcaccct
      361 gacccgcgac gatgggacgc gggtttcgga caagcaggtc ttcgacaggc cgacattgct
      421 gtatttcggc tacacctcct gccccgatgt ctgcccgctg gacaatgcgc gcaatgccga
      481 ggcggtggac atcctgaaat cgcagggcag ggatgcgcaa tcgatcttcg tcaccgtcga
      541 tcccgggcgc gacactcccg aggtgctggc ccgctttgcc gacagctttg gcggcgcagt
      601 gatcggcctg actggcagcg acgccgagat cgcggccgtc agcaagggct ggcggattta
      661 ttcccgggcg aatggcggaa agaacgaccg ggattacatg gtcgatcacg ccagcaatac
      721 ctatcttgtc atgccgggaa acaggacggt cgatctgttc ccgcgtgagg attcggccga
      781 aaaggtcgcc gcaaccgtcg gctgcaacct tgacgtggcg gcctgacagc cgcttgccgc
      841 aggcccgtcc atcgggcagt ctgcgcgccg atgcgcgcaa gaagggaaac atgatggctg
      901 aggatatcgc tgcccggatt ggtgccgatc cgtccttgct gctggtcgat gacgatgaat
      961 tgttcgtgac gcggctggcc cgcgccatgg agaaacgcgg ctttgccacc cgcaccgcgc
     1021 tgagcgtcag cgaagcgatg cggatgatcc gtgaacaggc gccggccttc gcggtcatcg
     1081 atctgcgcct cgaagacggc aatggcctgg acgtggtcga atcgttgcgc gagacgcgcg
     1141 aagatgcgcg gatcatcgtc ttgaccgggt atggtgccat cgcaaccgcc gtcgcggcgg
     1201 tgaaaatggg cgcgaccgat tatctcgcaa agcccgccga cgcaaatgac gtgacgtcgg
     1261 ctttgctggc tgtcggtgac ctgctgccgc ctcctcccga aaatccgatg tcggccgatc
     1321 gggtccgctg ggaacatatt cagcgcgttt acgagcaatg tgaccggaat gtcagcgaaa
     1381 ccgcccgccg tctgcatatg caccgacgca cgcttcagcg aattctcgcc aaacgcggac
     1441 cccgctgaca ggcgcaccga agggttgaaa ctttctcaat ataatctaat ttttcgttca
     1501 ccaatattct cacggacgaa gaagaaatga acgttgattt tgacaagatg acgctgaagg
     1561 aaatgcgcga tctacgcgcc aagctggatc gggcaatcag ttcctacgag gatcgcaagc
     1621 ggcgcgaagc gctggctgcg gtcgaagaag ccgcgcgcga acatgggttc aacctggcgg
     1681 agctgacagg cggcaaaccc cggcgcgcgg gcaccgtgcc cccgaaatac gtcaatccca
     1741 aggatcctac gatgacctgg acaggtcgtg gccgcaagcc gcgttgggtt caggaaagcc
     1801 ttgagggcgg caagcaactg gaagatctgc tgatctgaaa acaatcgggg aagggcgttt
     1861 cattgcgtct ttcccctgaa ggttaaaaaa gggttaatat tttccctttt catcgctgtt
     1921 tcccgtttga tccagcgccc gcataatcgc ggagaattgt tcgagaaatg cggcgcggac
     1981 cttcgcgggc gggctgagat cgatcttgag ccgggtcagt atctgttcgc cggggacggg
     2041 gaaaagcttg cgcgcctcgg tctcgtcgaa acccgcgatc tgaacggcct ccagtcgggc
     2101 cgaaatccgg tcggcggtct tgatccgctt cttcagtgcg gcgggaaggc tggcaggcag
     2161 accaaagcgg cgatggatcg ccgccgtcag cctttcatcc atcgcgccgt aatcctggcc
     2221 aagcgccgat ttcaccggcg agatcatgtc cccgatcacg tattcgggcg cgtcatgcaa
     2281 cagcgcggcc agccgcgcgg cgggatcggc gcgcggatcc agccggcaga agatatcctc
     2341 gaccagcagc gaatgaccgg ccacggaata gggccagtcg ccatgcgtct ggccattcca
     2401 gcgggcgacg aaggccagac catgggcgat gtcctcgatc tcgatgtcga a
//
LOCUS       DTVW01000861            1423 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2059294, whole
            genome shotgun sequence.
ACCESSION   DTVW01000861 DTVW01000000
VERSION     DTVW01000861.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1423)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1423)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1423
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2059294"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..370
                     /locus_tag="EYO87_11255"
     CDS             <1..370
                     /locus_tag="EYO87_11255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018001168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="sugar-binding transcriptional regulator"
                     /protein_id="HIC66554.1"
                     /translation="PGVREIFDLSHSATLKFVGMGTADSGAQLVASGMIEPREIEEIR
                     AAGGVGEMMGHFFDADGRVLETGLSARTLSVDLDGPEGSRIVVIAGGDEKIAGLRAVL
                     KSGCADGLITDEATARALAG"
     gene            563..1327
                     /locus_tag="EYO87_11260"
     CDS             563..1327
                     /locus_tag="EYO87_11260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002965778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HIC66555.1"
                     /translation="MKREERRQAIMDLLIAARAVDLDDLAGRFAVSKMTIHRDLDDLE
                     QTGLLRKVRGGATVEAGIQFESDFRIRALQDAGAKARMAAAALHLVEPGMSVMVNDGS
                     MAALLGTRLVERAPLTIITNNAAVIETLKDAPRITLIALGGAFDAKFNGFFGVVTEQA
                     LSRLRADLAFISTPAVSGLRAFHMSDAVVGAKRAMMDAAQRRVLLVNHARFGRSALHE
                     LAGLAEFDAIITDAPPAPEDRAAIDRAGLTLTIAED"
     gene            1332..>1423
                     /locus_tag="EYO87_11265"
     CDS             1332..>1423
                     /locus_tag="EYO87_11265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018001164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HIC66556.1"
                     /translation="MTIWIGTSWKMNKTLAEAGAFARRLAEADA"
BASE COUNT          266 a          415 c          521 g          221 t
ORIGIN      
        1 gcccggcgtg cgcgaaatct tcgacctgtc gcacagcgcg acgctgaaat tcgtcggcat
       61 gggcacggcg gattcgggcg cgcaactggt cgcttcgggc atgatcgagc cgcgcgagat
      121 cgaggagatc cgggcggcgg gcggggtggg cgaaatgatg ggccatttct tcgatgccga
      181 cgggcgggtg ctggaaaccg ggctgagcgc gcgaaccctg tcggtcgatc tggacgggcc
      241 ggaaggcagc cggatcgtgg tgatcgcggg cggggacgaa aagatcgccg gactgcgcgc
      301 ggtgctgaaa agcggttgtg ccgatggcct gatcaccgac gaggcgacgg cgcgcgccct
      361 tgccggctga gccgttgggg gaagcgggcc gggcaaggcc cgtcccggtc gctgccgctg
      421 ggccgttgcg gccgggacct ggcaacgcga tgcgcgaaat aacataaaaa taacacaaaa
      481 taacataaat tattgttgat aagtccaggc aagatgttaa aaaatggcga ggccgacagg
      541 gggcggcgaa ccggaggcaa ggatgaagcg cgaggaacgc aggcaggcga tcatggatct
      601 gctgatcgcg gcaagggcgg tcgatctgga cgatctggcc ggtcgttttg cggtttcgaa
      661 gatgaccatc catcgcgatc tggacgatct ggaacagacc ggactgctgc ggaaggtgcg
      721 cggcggcgcc accgtcgagg ccggcatcca gttcgaaagc gatttccgga tccgcgcctt
      781 gcaggatgcc ggcgccaagg cgcgcatggc cgcagcggcg ctgcatctgg tcgagccggg
      841 gatgagtgtc atggtcaatg acggctcgat ggcggcgctg ctgggcacga ggctggtcga
      901 aagggcgccg ctgacgatca tcaccaacaa tgccgccgtg atcgagacgc tgaaagacgc
      961 gccgcggatc acgctgatcg cgcttggcgg cgcgttcgac gccaagttca acggcttttt
     1021 cggcgtggtg acggaacagg ccctgtcgcg gctgcgcgcc gatctggcct tcatctcgac
     1081 cccggcggtg tcgggcctgc gggcgtttca catgagcgat gcggtcgtcg gcgccaagcg
     1141 ggcgatgatg gacgcggcgc agcgcagggt cctgttggtc aaccatgcac ggttcggccg
     1201 ttccgccctg cacgaactgg ccggtctggc cgaattcgat gccatcatca ccgacgcgcc
     1261 ccccgcgccc gaggatcgcg ccgcgatcga ccgggccggg ctgacgctga ccatcgcgga
     1321 ggattgagcg gatgacaatc tggatcggca caagctggaa gatgaacaag accctggccg
     1381 aagcaggcgc cttcgcccgc agactggccg aggctgacgc cga
//
LOCUS       DTVW01000862            1033 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2059533, whole
            genome shotgun sequence.
ACCESSION   DTVW01000862 DTVW01000000
VERSION     DTVW01000862.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1033)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1033)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1033
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2059533"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..603)
                     /gene="tdh"
                     /locus_tag="EYO87_11270"
     CDS             complement(<1..603)
                     /gene="tdh"
                     /locus_tag="EYO87_11270"
                     /EC_number="1.1.1.103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002826781.1"
                     /note="converts threonine and NAD to
                     1,2-amino-3-oxobutanoate and NADH; functions in threonine
                     catabolism; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonine 3-dehydrogenase"
                     /protein_id="HIC66557.1"
                     /translation="MSNMMKALVKARPEPGLWMEQVPVPEPGPGEVLIRVGKSAICGT
                     DVHIWNWDAWAAQTVPVPLVTGHEFSGVIADTGSAVTRFRPGQRVSGEGHITCGACRN
                     CRAGRGHLCRNTLGVGVQRAGSFAEYLCLPESNVVPIPDDIPDEIAAIFDPFGNAVHT
                     ALSFDCVGEDVLVTGAGPIGIMGALVARRAGARKVVITDIN"
     gene            complement(600..>1033)
                     /locus_tag="EYO87_11275"
     CDS             complement(600..>1033)
                     /locus_tag="EYO87_11275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002826782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HIC66558.1"
                     /translation="GPAPVIQMLRQRSRPYLFSNTLAPVIAGASLTALDLIEAGEDLR
                     ARLNGNAERFRAEMGAAGFTLAGAGHPIIPVMLGEAHLAGEFAAAMMRRGVYVTAFSF
                     PVVPRGQARIRTQMSAAHGKADLDRAIAAFIATGRDLKVIR"
BASE COUNT          168 a          376 c          335 g          154 t
ORIGIN      
        1 attgatgtcg gtgatgacga ccttgcgggc gcccgcccgc cgcgccacca gcgcccccat
       61 gatcccgatc gggcccgcgc ccgtgaccag cacgtcctcg cccacgcaat cgaagctgag
      121 cgcggtgtga acggcattgc cgaatgggtc gaagatcgcc gcgatctcgt cggggatgtc
      181 gtcgggtatc ggcaccacgt tgctttcggg caggcacaga tattcggcga aggatcccgc
      241 ccgctgcacg cccaccccca gcgtgttgcg acacagatgc ccgcgtccgg cgcggcaatt
      301 gcggcaggcc ccgcaggtga tgtgcccctc tcccgaaacg cgctggccgg ggcggaagcg
      361 tgtcaccgcg ctgccggtat cggcgatcac gccggaaaat tcatggccgg tgaccagcgg
      421 cacgggaacg gtctgcgccg cccaggcatc ccagttccag atatgcacgt cggtgccgca
      481 gatcgcgctt ttgccgacgc ggatcagcac ctcgccggga ccgggttcgg ggaccggcac
      541 ctgttccatc cacaatcccg gttcgggccg cgccttaacc agcgccttca tcatgttgct
      601 catcggatca ccttcaggtc gcggccggtc gcgatgaagg ccgcgatggc ccggtccagg
      661 tccgccttgc cgtgggcagc cgacatctgg gtgcggatgc gcgcctgccc gcgcggcacg
      721 acgggaaacg agaaggcggt gacatagacc ccgcggcgca tcatcgccgc cgcgaattcg
      781 cccgccagat gcgcctcgcc cagcatgacc gggatgatcg gatggccggc cccggccagc
      841 gtgaacccgg ccgcccccat ctcggcccgg aaacgttcgg cgttgccgtt caggcgcgcg
      901 cgcagatcct cgcccgcctc gatcagatcc agtgccgtca gcgaggcccc cgcaatcacc
      961 ggcgccagcg tgttcgaaaa cagatagggc cgagagcgtt gccgcaacat ctggatcacc
     1021 ggcgcaggcc ccg
//
LOCUS       DTVW01000863            2433 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2059686, whole
            genome shotgun sequence.
ACCESSION   DTVW01000863 DTVW01000000
VERSION     DTVW01000863.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2433)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2433)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2433
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2059686"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..141)
                     /locus_tag="EYO87_11280"
     CDS             complement(<1..141)
                     /locus_tag="EYO87_11280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008994110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA methyltransferase"
                     /protein_id="HIC66559.1"
                     /translation="MQHDPRQPVIILVRPQMGENIGAAARAMLNFGLTEMRLVDPRDG
                     WPN"
     gene            214..819
                     /locus_tag="EYO87_11285"
     CDS             214..819
                     /locus_tag="EYO87_11285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009804833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HIC66560.1"
                     /translation="MTDTPQLYLMTPAGAQASALGPLLTEVMDRFPPACLRIRAGAEE
                     DELGRLADLAREIAHNRDVAVVIEDHVRLAQRHGLDGVHLTDGARGVRAARKNLGADA
                     IVGAFCGTSRHEGMNAAEAGADYVSFGPVGDTALGRGGPAPLDLFQWWSEMIEVPVVA
                     EGAIDRALIADLSPVTDFIGIGAEIWSENDPLTALSALWLP"
     gene            894..1364
                     /locus_tag="EYO87_11290"
     CDS             894..1364
                     /locus_tag="EYO87_11290"
                     /inference="COORDINATES: protein motif:HMM:PF01292.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome B"
                     /protein_id="HIC66561.1"
                     /translation="MFRYTTQQIVLHWTIVLLVIFQYLWNGPMGQAFGQLMRGGDKVL
                     GPVALAHLVVGVTILAITIWRLALRRRAPAAPHGRAGLDRVAVLIHALLHIVLIAIPL
                     AGLAAWFGGIGRAGDLHVLLTDLLLVLAGLHVAAALYHHFVLKDGLMNRLRPRR"
     gene            complement(1361..1948)
                     /locus_tag="EYO87_11295"
     CDS             complement(1361..1948)
                     /locus_tag="EYO87_11295"
                     /EC_number="2.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018001105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide formyltransferase"
                     /protein_id="HIC66562.1"
                     /translation="MKRVAILISGGGSNMVRLAEDMTGDHPARPVLVVSNDPAASGLA
                     RAAAMGIPTAAIDHRAYPGDRARFEAALLRPLLRARPDIICLAGFMRVLTPDFVQLFA
                     GRMLNIHPSLLPKYPGLHTHARAIAAGDAEAGASVHEVIADLDAGPVLGQARVRVEPG
                     DTPRSLAARVLAQEHRLYPAVLRRFAAGDRTPLML"
     gene            complement(1945..>2433)
                     /locus_tag="EYO87_11300"
     CDS             complement(1945..>2433)
                     /locus_tag="EYO87_11300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017928498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HIC66563.1"
                     /translation="SDGVHSNGYSLVRKVAKRAGLGWDDAAPFARGSLGQALLVPTRL
                     YVKPALAAIRAGGVHGLAHITGGGITENLPRILPRGLGAQIDLGAWPLPPVFGWLAQA
                     GGIGRDEMLKTFNSGVGMVLSVAADRADALTAVLADQGERVHRIGRVTEGEGVRYSGT
                     PA"
BASE COUNT          376 a          825 c          854 g          378 t
ORIGIN      
        1 attgggccag ccgtcgcgcg gatcgaccag ccgcatctcg gtcaggccga aattcagcat
       61 ggcgcgcgcc gcggcgccga tattctcgcc catctgcggg cgaaccagga tgatgacggg
      121 ctggcgcgga tcgtgctgca tggccgtccg catagtccgt ctggcagcgg gcggcaagct
      181 gcgctatctg caggggaacc gatggagttt cccatgaccg acacgccgca gctttacctg
      241 atgacccccg ccggcgcgca ggcctcggcc ctggggccgc tgctgaccga ggtgatggac
      301 cgctttcccc ccgcctgtct gcgcatccgc gcgggcgcgg aagaggacga actgggccgc
      361 ctcgccgatc tggcgcgcga gatcgcccat aaccgtgacg tggcggtggt gatcgaagat
      421 catgtcaggc tggcccagcg gcacgggctt gacggggtgc acctgaccga cggtgcgcgc
      481 ggcgtccgcg ccgcacgcaa gaatctgggc gccgacgcca tcgtcggcgc cttctgcgga
      541 acctcgcgac acgaggggat gaacgcggcc gaggcggggg cggattacgt cagcttcggc
      601 ccggtcggcg acaccgcgct tgggcgcggc ggccccgccc cgctggacct gttccagtgg
      661 tggtccgaga tgatcgaggt gccggtcgtt gccgagggcg cgattgatcg cgccctgatc
      721 gcggatctgt cgccggtgac ggatttcatc ggcatcggcg cggaaatctg gtccgagaac
      781 gatcccctca ccgccctgtc ggccctgtgg ctgccatgac gtccggcttt tgcgttccgt
      841 tggagaaccc ggcctgaccg ccatctcgat cctgacgaaa aaggaaaaca ccgatgttcc
      901 gatatacgac gcaacagatc gtgctgcact ggacgatcgt gctgctggtg atctttcaat
      961 atctgtggaa cgggccgatg ggacaggcct tcggccagct catgcgcggc ggtgataagg
     1021 ttctggggcc ggtcgccctg gcccatctgg tcgtcggcgt gacgatcctg gccatcacga
     1081 tctggcggct ggccctgcgc cgccgcgcgc cggccgctcc gcacggccgt gccgggctgg
     1141 acagggtcgc ggtgctgatt cacgccctgc tccatatcgt gctgatcgcg atcccgctgg
     1201 ccgggctggc cgcctggttc ggcggaatcg gccgcgcggg cgacctgcac gtgttgctga
     1261 cggacctgct gctggtactg gcgggactgc atgtggccgc cgcgctctat catcacttcg
     1321 ttctgaagga cgggctgatg aaccggctgc gcccgcgacg ctagagcatc agcggagtcc
     1381 ggtcgcctgc ggcgaaacgg cgcagcacgg ccggatagag gcgatgttcc tgcgccagca
     1441 cccgcgcggc aaggctgcgg ggcgtgtcgc cgggctcgac acgcacccgt gcctgcccca
     1501 gaaccggacc cgcatccaga tcggcgatca cctcgtgcac gctcgcgccg gcttcggcat
     1561 cgccggcagc gatggcgcgg gcatgggtgt gcaggccggg gtattttggc aacagagaag
     1621 gatggatgtt cagcatccga ccggcgaaaa gctgcacgaa atcaggggtc agaacgcgca
     1681 tgaagccggc gaggcagatg atgtcgggcc gcgcccgaag cagcgggcga agcagcgcgg
     1741 cctcgaacct cgcgcggtcg ccgggatagg cgcggtggtc gatcgcggcg gtcgggatgc
     1801 ccatcgcggc ggccctggcc aggcccgagg cggcgggatc gttcgagacg accagaaccg
     1861 gccgcgcagg atgatcgccc gtcatgtcct cggccagccg gaccatgttc gatccgccgc
     1921 cagagatcag gatcgcaacg cgcttcacgc aggcgttccg ctgtagcgca ccccctcgcc
     1981 ctccgtcacg cggccgatcc ggtggacgcg ctcgccctga tcggccagca ccgcggtcag
     2041 cgcgtcggcg cggtcggcgg cgaccgacag gaccatgccc actccgctgt tgaaggtttt
     2101 cagcatctcg tcccgtccga tgccacccgc ctgtgccagc cagccgaaga ccggcggcaa
     2161 gggccatgcg ccaaggtcga tctgggcgcc caggccccgg ggcaggatgc gcggcagatt
     2221 ttcggtgatg ccgccgccgg tgatatgggc cagcccgtga accccgcccg cgcggatcgc
     2281 ggccagcgcg ggtttgacat aaagccgcgt cggcaccagc agggcctgac ccagcgagcc
     2341 ccgggcgaaa ggcgcggcat cgtcccagcc gaggccggcg cgctttgcga ccttgcgaac
     2401 tagcgaatag ccgttggaat gaaccccgtc cga
//
LOCUS       DTVW01000864            1440 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2060637, whole
            genome shotgun sequence.
ACCESSION   DTVW01000864 DTVW01000000
VERSION     DTVW01000864.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1440)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1440)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1440
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2060637"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            13..573
                     /locus_tag="EYO87_11305"
     CDS             13..573
                     /locus_tag="EYO87_11305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NifU family protein"
                     /protein_id="HIC66564.1"
                     /translation="MFIQTETTPNPATLKFLPGETVLGSGTADFPTPESGAKSPLARR
                     IFAIEGIAGVFLGRDFVTVTKVEDQPWDHLKPSILGAIMEHFQSGAPVIEGEAPESAG
                     HAAHDGPDSEIVVQIKELLDTRVRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSS
                     TLTLKMGIENLLRHYIPEVIEVRPVA"
     gene            566..1177
                     /gene="tsaB"
                     /locus_tag="EYO87_11310"
     CDS             566..1177
                     /gene="tsaB"
                     /locus_tag="EYO87_11310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011746875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     dimerization subunit type 1 TsaB"
                     /protein_id="HIC66565.1"
                     /translation="MPEGIALGFDTSAAHCAAALLRGDRVLVQHHEAMARGQAERLFP
                     LLEQLLAEAGLNWHDLDVIGVGTGPGNFTGIRVAVAAARGLALSLGIPALGVAVTEAA
                     AHGLPRPCRVVIPARREQVIWQDFGTGAADDAGGRPQQAAAGALPPGPAPAAPAIPLA
                     EAIARLALERRDSPAQPRPAPIYLRPADAAPPREAGLVILERE"
     gene            1174..>1440
                     /locus_tag="EYO87_11315"
     CDS             1174..>1440
                     /locus_tag="EYO87_11315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HIC66566.1"
                     /translation="MTPDRLAALHARCFVAPRPWSETEFRALLDMPGAFLLLRPDAFL
                     LGRSIAGEAELLTLAVAPEARQRGVGRALTQDFAATSRRLGAGTA"
BASE COUNT          200 a          507 c          497 g          236 t
ORIGIN      
        1 ggagcgcgcc ccatgttcat ccagaccgaa accacgccca acccggcgac cctgaaattc
       61 ctgcccggcg aaaccgtcct gggcagcggc accgcggatt tcccgacgcc tgaatccggc
      121 gcgaaatcgc ctttggcccg ccgcatcttc gccatcgagg gtatcgccgg cgttttcctg
      181 ggccgggatt tcgtgaccgt caccaaggtc gaggatcagc cctgggatca tctcaaaccc
      241 tcgatcctgg gcgcgatcat ggagcatttc cagtccggcg ccccggtgat cgagggtgag
      301 gcccccgaaa gcgccggtca tgccgcgcat gacggcccgg attccgagat cgtggtccag
      361 atcaaggaat tgctggatac ccgtgtccgc ccggcggtgg cgcaggatgg cggcgacatc
      421 acctttcacg gattcgaccg gggcgtggtc tatctgcaca tgcagggggc ttgcgcgggt
      481 tgcccgtcct cgaccctgac gctgaagatg gggatcgaga acctgctgcg ccactatatc
      541 cccgaggtga tcgaggtcag gcccgttgcc tgaggggatt gccctgggct tcgacacatc
      601 ggccgcgcat tgcgcggccg ctttgcttcg gggcgaccgg gtgctggtcc agcatcatga
      661 agcgatggcc aggggacagg ccgaacggct gtttccgctg ctggaacagc tgctggccga
      721 ggcgggactg aactggcacg atctggatgt catcggcgtc ggcaccgggc ccggcaactt
      781 caccggaatc cgggtagcgg ttgcggcggc gcgcggactg gccctgtcgc tgggcattcc
      841 ggccctgggc gtcgccgtga ccgaggctgc ggcccatggc ctgccccgac cctgccgcgt
      901 cgtgatccct gcgcggcgcg agcaggtgat ctggcaggat ttcggcaccg gcgcggcgga
      961 tgatgcgggg ggccggccgc agcaagctgc ggccggcgcg ctgccgcccg gccccgcgcc
     1021 ggctgcgccg gcaatcccgc tggccgaggc cattgcgcgt ctggcgctgg agcgccgcga
     1081 cagtcccgcc cagccgcgcc ccgcgccgat ctatctgcgt ccggccgatg ccgccccccc
     1141 gcgcgaggcg ggattggtca ttctggaaag agaatgacac ccgaccggct tgccgcgctg
     1201 cacgcgcgct gcttcgtcgc cccgcgcccc tggtcggaaa ccgagttccg cgctctgctg
     1261 gacatgccgg gcgccttcct tctgcttcgg cccgatgcgt tccttctggg tcgcagcatc
     1321 gcgggcgagg ccgaattgct gaccctcgca gtcgcgcccg aggcgcggca gcggggcgtg
     1381 ggacgcgccc tgacgcagga ttttgccgca acgtcacgcc gcctgggcgc cggcaccgcc
//
LOCUS       DTVW01000865            1260 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2061254, whole
            genome shotgun sequence.
ACCESSION   DTVW01000865 DTVW01000000
VERSION     DTVW01000865.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1260)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1260)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1260
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2061254"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..590)
                     /locus_tag="EYO87_11320"
     CDS             complement(<1..590)
                     /locus_tag="EYO87_11320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017980311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase-like activity of phytase family
                     protein"
                     /protein_id="HIC66567.1"
                     /translation="MRVLFVILAVLLIVPGWAGEERLPLLGRHPELTVRRVDLDPADP
                     SRRRLGSLTYLGGAELRSRDPAFGGYSSLRVERRPNGDRFTLLSDGGNIVAFTMGADW
                     RPHGVQFQNLPQGPGTGWEKRDRDTESMAADPATGLIWVGYERYNAIWRYAPGFARAE
                     AQRTPPEMARWPINGGPESLARLPDGRFVTISEDAHV"
     gene            768..1136
                     /locus_tag="EYO87_11325"
     CDS             768..1136
                     /locus_tag="EYO87_11325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017980312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine zipper 2TM domain-containing protein"
                     /protein_id="HIC66568.1"
                     /translation="MLKTLSLAGAALAMTASALVPVTAASAQRGYYGGYDRGYAYDRG
                     YRDDRVYRGDRGYYRDRGYARRCNDGTTGTVLGAIAGGLLGRTIDTRGDRTLGTVLGA
                     GAGALAGRAVERSDRPGYCR"
BASE COUNT          197 a          466 c          412 g          185 t
ORIGIN      
        1 acatgcgcat cctcgctgat cgtcacgaat cgcccatccg gcaggcgcgc gagcgattcg
       61 gggccgccat tgatcggcca gcgcgccatc tcaggcggcg tgcgctgcgc ctcggcgcgc
      121 gcgaaaccgg gagcgtagcg ccagatggcg ttatagcgct cataccccac ccagatcagc
      181 cccgtcgccg gatcggccgc catcgattcg gtgtcgcggt cgcgcttctc ccaaccggtg
      241 cccggtccct gcggcaggtt ctggaactgc acgccatgcg gccgccagtc cgcgcccatc
      301 gtgaaggcga cgatattgcc gccatcgctg agcagcgtga accggtcgcc gttcggccgc
      361 cgctccaccc gcagcgacga atagccgccg aacgccggat cgcggctgcg cagctcggca
      421 ccgcccagat aggtcagcga tcccagccgc cggcgcgacg gatcggcggg gtccagatcg
      481 acacgccgca cggtcagttc ggggtgccgc cccaacagcg gcaggcgttc ttcccccgcc
      541 cagccgggaa cgatcagcaa caccgccaag atgacgaaca gcacacgcat gccgcgcctc
      601 atagggtgcg gagcggcagg cggcacccct gctctgcctg aacggacgat aacgggcgca
      661 ttcagggtcg ggtcaacgcg actcgggcaa aagacatcca tcgacgacgg gcaggtgccc
      721 ccccgcatcg ccgtcgaaac ggacagatta cggacgggag aagacccatg ctgaagaccc
      781 tgagcctcgc cggtgccgcg ctcgccatga ccgcctcggc cctcgtgccg gttaccgctg
      841 cctcggcgca gcgtggctat tacggcggtt acgatcgcgg ctacgcctat gaccgcggct
      901 atcgtgacga tcgcgtctat cgcggcgacc gtggctatta ccgcgaccgc ggctacgccc
      961 gccgctgcaa cgacggcacc accggtacgg tgctcggtgc gatcgccggt ggcctgctcg
     1021 gccgcacgat cgacacccgt ggcgatcgca cgctcggcac cgtcctcggc gccggtgcgg
     1081 gtgccctcgc cggccgcgcg gtcgagcgct cggatcgccc cggctattgc cggtaagcgt
     1141 taagccccgc gtagcgtaac ggggtgcgag gcccggtctt ccttcgggaa gggcgggcct
     1201 tgtgttgtgt gcgagattcg tgacctcgcc ccgcccacgc cgtcaccccg gacttggtcc
//
LOCUS       DTVW01000866            3370 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2062388, whole
            genome shotgun sequence.
ACCESSION   DTVW01000866 DTVW01000000
VERSION     DTVW01000866.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3370)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3370)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3370
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2062388"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(67..654)
                     /locus_tag="EYO87_11330"
     CDS             complement(67..654)
                     /locus_tag="EYO87_11330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_355237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FMN-dependent NADH-azoreductase"
                     /protein_id="HIC66569.1"
                     /translation="MQILHIDSAITGEASVSRKLTADIIAKLKAANPDAAVTYRDLNA
                     GVPAIDTDWFHAVRLAPESPTAGQRRLIETADAYLAEVRDADVLVIGSPVYNFAITAQ
                     LKNWLDQIARAGLSFRYTEAGPEGLLKGKRAIIAYSSAGTPLGSDLDFASGYLRHILG
                     FLGITDVEFVAADRLAMDREAGLARARQAVDNLAA"
     gene            748..1593
                     /locus_tag="EYO87_11335"
     CDS             748..1593
                     /locus_tag="EYO87_11335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013066116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HIC66570.1"
                     /translation="MNIGSWDDIRIALAVARSGTVSGAAEALGVHHATVIRRIDALEA
                     QLGTRLFQRHPRGYALTEPGQALLQVARDTDERFAQLAAQIGGAGDRIEGELVVTSLP
                     GLSDLVMPRLIGLLRRHPGLRLNYVTDVRLFRLAAGEAHVAIRAGTRPTEPDYVVRRM
                     TDLPQSLYATAGYLKDHGDPADLARQRLALPGPEARNAPLMRWLAARTPPDAVVMTAN
                     DTAAREAVIRAGLAMGPLPPARAAGLVEALSLPEWSSALWLVTHVDLHRTPKVQAAVA
                     ALRGD"
     gene            1708..2283
                     /locus_tag="EYO87_11340"
     CDS             1708..2283
                     /locus_tag="EYO87_11340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015666124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkylhydroperoxidase"
                     /protein_id="HIC66571.1"
                     /translation="MTDAHPISRFPVPDPASLPDDIRLAIAKVAEKSGFVPNVFLALA
                     HRPAEFRAFFAYHDALMDKDEGLTRAERELIVVATSGLNQCQYCVVAHGAILRIRAKN
                     PLIADQVAVNWRKADLEPRERAMLAYAEKVALNAQQIGEADHATLREAGFSPDEIWDI
                     GAIAAFFGMSNRLVNAGDIRPNDEFYLLGRM"
     gene            2316..3218
                     /locus_tag="EYO87_11345"
     CDS             2316..3218
                     /locus_tag="EYO87_11345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006310430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HIC66572.1"
                     /translation="MAISARMESEDWALLLLLSLLWGGSFFLISIALTGLPVLTIVAL
                     RLLVAALVLWAIVAATGRRLPRDPAIWRAFLVMGVLNNAIPFSLIVWGQTEIPSGLAS
                     ILNATTPLWTVLVTAALLADERASPRKIAGVVLGLGGVAVMIGLDALAGLGQAIWPQL
                     AILGAAISYAFANSFGRRFRRGGVDPVVTAAGMVTGSGAVLIPLALAIEGLPGSASAQ
                     AWLAVLTLGVAGTGLAYVLYFRILGRAGATNISLVTFLVPVSAILLGWLFLGETLGIA
                     HLLGMGLIAAGLALIDGRLIGARG"
     gene            3215..>3370
                     /locus_tag="EYO87_11350"
     CDS             3215..>3370
                     /locus_tag="EYO87_11350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019296641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HIC66573.1"
                     /translation="MIARAQALRGHAAMLLFSALVAGSFSLGARAANLIDPAAITAAR
                     FVIAAALI"
BASE COUNT          485 a         1061 c         1241 g          583 t
ORIGIN      
        1 ccgggatcac ataggcaaaa acggccaccg agtcaacgat ggccgtccca aaatgcggtg
       61 gccggatcag gcggccagat tgtccacggc ctgccgcgcg cgggccagac cggcctcgcg
      121 gtccatggcc agccggtcgg cggcgacgaa ttccacgtcg gtgatgccca ggaaacccag
      181 gatatggcgc aggtagcccg aggcgaagtc cagatcggag cccagcggcg tcccggccga
      241 ggaataggcg atgatggcgc gcttgccctt cagcaaccct tcgggaccgg cttccgtata
      301 gcggaaggac aatccggcgc gggcgatctg gtccagccag ttcttcaatt gcgcggtgat
      361 cgcgaaattg tagacgggcg agccgatgac cagcacgtcg gcatcccgca cctcggccag
      421 ataggcgtcg gcggtctcga tcagcctgcg ttgtccggcg gtggggcttt ccggggccag
      481 acggacggcg tggaaccagt cggtgtcgat ggcgggcacg ccggcattga ggtcgcgata
      541 ggtgacggcg gcgtcgggat tggccgcttt cagcttggcg atgatgtcgg cggtcagctt
      601 tcgcgagacc gaggcctcgc cggtgatggc gctgtcgata tgaaggatct gcatccgaag
      661 gctccttaaa ggctgcatgc cggatttagg tctatgcgcc agagaacgaa agggccataa
      721 acgcgcaggc tctgtgcgga gatgcacatg aatatcggaa gttgggatga catcaggatt
      781 gccttggcgg tcgcccggtc cgggacggtc agcggcgcgg ccgaggccct gggcgttcac
      841 catgcgaccg tgatccgccg gatcgacgcg ctggaggcgc aactgggcac gcgcctgttc
      901 cagcggcatc cgcgcggcta tgcgctgacc gagccggggc aggcgctgct gcaggtggcg
      961 cgcgacaccg acgagcgttt cgcccagctt gccgcgcaga tcggcggcgc gggcgaccgg
     1021 atcgagggtg aactggtcgt gacctcgttg cccggtctgt cggatctggt catgccgcgc
     1081 ctgatcggtc tgctgcggcg ccatccgggg ctgcggctga attatgtcac cgatgtgcgt
     1141 ctgttccggc tggccgcggg cgaggcgcat gtggctatcc gcgccggaac ccgcccgacc
     1201 gagcccgatt acgtcgtgcg ccggatgacc gatctgccgc aatcgctgta tgcgacggcc
     1261 gggtatctga aggaccatgg cgatccggcc gatctggcgc ggcagcggct ggcgctgccc
     1321 ggccccgagg cgcgcaacgc gccgctcatg cgctggctgg cggcccggac ccccccggat
     1381 gcggtggtca tgacggcgaa cgacaccgcc gcgcgcgagg cggtgatccg cgccgggctg
     1441 gcgatgggac cgctgccgcc cgcccgcgcg gcggggctgg tcgaggcgct gagcctgccc
     1501 gaatggagct cggccctgtg gctggtgacg catgtggacc tgcaccgcac gcccaaggtg
     1561 caggcggcgg tcgcggccct gcgcggcgat tgacggagtt gcgggggcag cccggacgcg
     1621 gcgccctccc gcgcccggcc gggattgaaa gcggctttca tccccgcgcg gcctgacgca
     1681 gagtgccgcc ccaaggagga acccgccatg accgacgccc acccgatcag ccgctttccc
     1741 gtgcccgatc cggccagcct gcccgacgat atccggcttg cgatcgccaa ggtcgccgaa
     1801 aaatcgggtt tcgtgcccaa tgtgtttctg gcgctggccc atcgcccggc cgaatttcgc
     1861 gccttcttcg cctatcatga cgcgctgatg gacaaggacg aggggctgac cagggccgag
     1921 cgggaattga tcgtggtcgc gaccagcggg ctgaaccagt gccagtattg cgtcgtggcc
     1981 catggcgcga tcctgcggat ccgggcgaaa aacccgctga tcgcggacca ggtggcggtg
     2041 aactggcgca aggcggatct ggaaccgcgc gagcgggcga tgctggccta tgccgagaag
     2101 gtggcgctga atgcgcaaca gatcggtgaa gccgatcacg cgaccctgcg cgaggccggt
     2161 ttcagcccgg acgagatctg ggatatcggt gccattgcgg cctttttcgg gatgtcgaac
     2221 cggctggtca atgcgggcga tatccggccc aacgacgagt tctacctgct ggggcggatg
     2281 tgaagccgcc gcaggcgccg ctgccgcccg gccaaatggc gatctcggcg cggatggagt
     2341 cggaagactg ggcgctgctt ttgctgctgt cgctgctgtg gggcggatcg ttcttcctga
     2401 tttcgatcgc gctgaccggc ctgccggtgc tgaccatcgt cgccctgcgg ctgctggtgg
     2461 cggcgctggt tctgtgggcg atcgtggccg cgaccgggcg caggctgccg cgcgatccgg
     2521 cgatctggcg cgcgtttctg gtcatgggcg tgctgaacaa tgccattccc ttcagcctga
     2581 tcgtctgggg acaaaccgag attccgtccg ggctggcctc gatcctgaac gcgacgacac
     2641 cgctctggac ggtcttggtc accgccgccc tgctggcgga cgaacgcgcc agcccgcgca
     2701 agatcgcggg agtggtgctg ggactgggcg gcgtggcggt gatgatcggt ctggatgcgc
     2761 tggcggggct gggtcaggcg atttggccgc aattggcgat cctgggagcc gcgatttcct
     2821 acgccttcgc caacagcttc gggcgacggt ttcggcgcgg aggtgtcgat ccggtggtga
     2881 cggcggcggg gatggtgaca ggcagcggcg cggtgctgat cccgctggct ttggcgatcg
     2941 agggcttgcc cggcagcgcc tcggcgcagg catggctggc cgtgctgacg ctgggcgtcg
     3001 ccgggaccgg actggcctat gtgctgtatt tccgcattct cggccgcgcg ggggcgacga
     3061 atatctcgct ggtgacattc cttgtgccgg tttcggcgat ccttctgggc tggctgtttc
     3121 tgggcgagac actgggtatc gcgcatctgc tcggcatggg cctgatcgcg gccgggctgg
     3181 ccctgatcga cgggcggctg atcggggcgc gcggatgatc gcgcgggcgc aagccctgcg
     3241 gggtcatgcc gcgatgcttc tgttctcggc gctggtggcg gggtctttct cgctgggcgc
     3301 gcgggcggcc aacctgatcg acccggcggc gatcactgcc gcgcgctttg tgatcgccgc
     3361 cgcgctgatc
//
LOCUS       DTVW01000867            1486 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2064795, whole
            genome shotgun sequence.
ACCESSION   DTVW01000867 DTVW01000000
VERSION     DTVW01000867.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1486)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1486)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1486
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2064795"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>1486
                     /locus_tag="EYO87_11355"
     CDS             <1..>1486
                     /locus_tag="EYO87_11355"
                     /inference="COORDINATES: protein motif:HMM:PF01464.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HIC66574.1"
                     /translation="LALAAADVRDWVTARDAAKRSGPVAESLVGWQALRAGYGDFADY
                     LAFIRRHPDWPGLNLLRRRGEAKLPATLPEADIRDWLGDEPPRSLRAETALLAVLDPD
                     EARAERARFWTETPLEGEEETAFLDRYGEELAPLMTARAVAMLDRQEWAQAQRLLERL
                     PQTDRPLIAARIALQARQPGVDDMILALPADQREDPGLTMDRFRWRVKAKFHDGARDL
                     MLAASTSAEALRVPELWAQMRVDYARLAMRQGDWALAERLAAQHFLTPDNPHYSDLEW
                     LAGFAALHQGAGQRALDHFRHLETVVGSAISTARALYWQGRAQEALGDQAAARAAYAG
                     AARQPGVFYGQLAAEKVRATMPPAFAVPGKAVETLPDWRGARLAENDVFRAGLWLLAV
                     GRVDEAQRFFLQLSQTAEPEDIARMARLMIEARAPWHGLRLSKQAAGKGVIYPAAQFP
                     LTGLEKADLGLPPELILSIARQESEFNHTASSPVGARGLMQLMPG"
BASE COUNT          225 a          506 c          532 g          223 t
ORIGIN      
        1 gctggcgctg gccgccgccg atgtgcgcga ctgggtgacc gcgcgcgatg ctgcgaaacg
       61 gtcgggcccc gtggccgaat cgctggtcgg ctggcaggcc ctgcgcgcgg gctacggcga
      121 tttcgccgat tacctcgcct tcatccgccg gcatccggat tggccaggtc tgaacctgtt
      181 gcgcagacgc ggcgaggcga aactgcccgc caccctgccc gaggccgaca tccgcgactg
      241 gctgggcgat gagccgcccc ggtcgctgcg cgccgaaacc gcgttgctgg cggttctgga
      301 ccccgacgag gcccgcgccg aacgcgcacg gttctggacc gaaacaccgc tggaaggcga
      361 ggaagaaacg gcgttcctgg atcgctatgg cgaagaactt gcgccgctga tgacggcgcg
      421 cgcggtggcc atgctggacc ggcaggaatg ggcgcaggcc cagcggctgc tggaacgcct
      481 gccccagacc gaccgccccc tgatcgccgc ccggatcgcg cttcaggcgc gccagccggg
      541 tgtcgatgac atgatccttg ccctgccggc cgaccagcgc gaggatcccg gcctgaccat
      601 ggaccgcttt cggtggcggg tgaaggcaaa gttccacgac ggcgcgcggg atctgatgct
      661 tgcggcctcg accagcgccg aggcattgcg ggtgcccgaa ctctgggcgc agatgcgggt
      721 cgactacgcg cgcctggcga tgcggcaggg cgactgggcg ctggccgaaa ggctggccgc
      781 gcagcatttc ctgacgccgg acaatccgca ttattccgac cttgaatggc tggccggatt
      841 cgcggcgctg catcagggcg cggggcagcg ggcgctggat catttccgcc atctggaaac
      901 cgtcgtcggc agcgcgatca gcactgcgcg ggcgctttac tggcagggcc gcgcacaaga
      961 ggcgcttggc gatcaggcgg cggcgcgagc agcctatgcc ggggcggcgc ggcagcccgg
     1021 cgtcttctat ggccagcttg ccgcagaaaa ggttcgcgcc accatgccgc ccgcctttgc
     1081 ggtccccggc aaggcggtcg agaccctgcc cgactggcgc ggcgctcggc tggccgagaa
     1141 cgacgtcttt cgcgccgggc tgtggctgct ggcggtcggg cgggtggatg aagcacagcg
     1201 atttttcctg caactttcgc aaacggccga gcccgaggac atcgcccgca tggcccggct
     1261 gatgatcgag gcgcgggcgc cctggcatgg cctgcgcctg tccaagcagg ccgccggcaa
     1321 gggcgtgatc tatcccgccg cgcaattccc gctgaccggg ctggaaaagg ccgatctggg
     1381 gctgcctccc gaactgatcc tgtcgatcgc gcgacaggaa tccgaattca accacacggc
     1441 cagcagcccg gtcggcgcgc gcggtttgat gcagctgatg cccgga
//
LOCUS       DTVW01000868            2529 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2065618, whole
            genome shotgun sequence.
ACCESSION   DTVW01000868 DTVW01000000
VERSION     DTVW01000868.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2529)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2529)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2529
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2065618"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..134)
                     /locus_tag="EYO87_11360"
     CDS             complement(<1..134)
                     /locus_tag="EYO87_11360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01620 family protein"
                     /protein_id="HIC66575.1"
                     /translation="MTDDSARKRGPVLIELDAPGTAAGPEAPRAARHEPREDGPSPAD
                     A"
     gene            complement(131..1498)
                     /locus_tag="EYO87_11365"
     CDS             complement(131..1498)
                     /locus_tag="EYO87_11365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011746984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcjX family protein"
                     /protein_id="HIC66576.1"
                     /translation="MGIGSDLMTGLGLGDPVIRLGVTGLSRAGKTVFITSLVANLMDR
                     GRMHALRAAADGSLKAAWLQPQPDDTIPRFDFERHLAALTGPGPHWPDGTRHVSQLRL
                     SLRIDRKGLLSGLRGPQIVHLDIVDYPGEWLLDLRLMDRDFATWSDEVMARMQGRPGA
                     QDYMAALSGIDGTRFDEPTAQTLAQTYTAHLNAARDAGFSDCTPGRFLIPGEMAGSPA
                     LTFAPLPGTLRDGKLGREFRRRFDAYKSRVVKPFFRDHFARIDRQVVLVDVLGAIHQG
                     PRAVEDMRRAMADILTAFRPGRAGWLAQLLGTRRVERILFAATKADHLHHIQHNRLTA
                     MLSAMLREARDRADFSGARTEAMSIAALRATTEEMIRQENEELPAVRGRLLDGRQAAF
                     YPGELPADPAALLHPAREGAQGWLDGDYAIMNFAPAPMTARPGDGPPHIRLDRAVEFL
                     IGDRL"
     gene            1609..>2529
                     /locus_tag="EYO87_11370"
     CDS             1609..>2529
                     /locus_tag="EYO87_11370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent helicase HrpB"
                     /protein_id="HIC66577.1"
                     /translation="MSDRLPIEDVLPALCAALAAHGRAVLVAPPGAGKTTRVPLALLD
                     QIAGRIVMLEPRRLAARAAAERLAHGLGEGVGGRVWYRIRGESVPGSRIEVVTEAILT
                     RMIQSDPSLEGVGCVIFDEFHERSLNADLGLALVWEARGALRPDLAVLVMSATLAAGP
                     VAALMDDAPVLRSEGRAWPVETRWLDRPLPAGMRLAAEAARLILQAEAETRESGGTIL
                     AFLPGEGEIRRVMGQLGATDCEVLPLYGALDAKAQRAALSPPGARRRIVLATAIAETS
                     LTIPQVRVVVDSGAARRARFDPGSGMSRLVT"
BASE COUNT          350 a          844 c          949 g          386 t
ORIGIN      
        1 gcgtcggcgg ggctggggcc gtcctcgcgc ggttcgtgcc gggcggcgcg gggtgcctcg
       61 ggccccgcag ccgttccggg cgcgtccagc tcgatcagaa ccgggccgcg tttgcgggca
      121 gaatcgtcgg tcacagtcgg tctccgatca ggaattccac ggcacggtcc agccggatat
      181 ggggcgggcc gtcgcccgga cgcgcggtca tcggcgccgg cgcaaagttc atgatggcgt
      241 aatcgccgtc cagccagccc tgcgcgccct cgcgcgcggg atgcagcagc gccgccggat
      301 cggcgggcaa ttcgccggga tagaaggccg cctgacgccc gtccagcagc cggccgcgca
      361 cggcgggcag ttcctcgttt tcctgccgga tcatttcctc ggtcgttgcg cgcagggcgg
      421 cgatggacat ggcctcggtg cgcgcgccgc tgaaatcggc gcggtcgcgg gcctcgcgga
      481 gcatggccga cagcatcgcg gtcaggcggt tgtgctgaat gtggtgcaga tggtcggcct
      541 tggtcgcggc gaacaggatg cgttccacgc gccgggtgcc cagaagctgg gccagccagc
      601 cggcgcggcc cgggcggaag gcggtcagga tatcggccat ggcgcggcgc atgtcctcga
      661 ccgcgcgcgg gccctgatgg attgcgccca gcacatcgac cagcaccacc tgacggtcga
      721 tccgggcgaa atggtcgcgg aagaagggtt tcacgacccg cgacttgtag gcgtcgaagc
      781 ggcggcggaa ttcgcgaccc agcttgccat cgcgcagggt gcccggcagc ggcgcaaagg
      841 tcagggcggg cgatccggcc atctcgcccg gaatcaggaa acgccccggc gtgcagtccg
      901 aaaagcccgc atcgcgggcg gcgttcagat gcgcggtata ggtctgggcc agggtctggg
      961 cggtcggttc gtcgaaccgc gtgccgtcga tccccgacag ggctgccatg tagtcctgcg
     1021 cgccgggccg gccctgcatc cgcgccatga cctcgtccga ccaagtcgcg aaatcgcgat
     1081 ccatcagccg cagatccagc agccactcgc ccggataatc gacgatgtcc agatgcacga
     1141 tctgcggccc gcgcaggccg gacaacagcc ccttgcgatc gatccgcagg gacaggcgca
     1201 actggctgac atggcgggtg ccgtcgggcc aatgcgggcc ggggccggtc agcgccgcca
     1261 gatgacgttc gaaatcgaag cgggggatgg tgtcgtcggg ctgcggttgc aaccaggcgg
     1321 ccttcaggct gccatcggcg gcggcgcgca gcgcgtgcat tcggccgcga tccatcaggt
     1381 tcgcgaccag cgaggtgatg aacaccgtct tgcccgcgcg tgacaggccg gtgaccccca
     1441 gccggatcac cggatcgccg aggccaagac ccgtcatcag atcgctgccg atacccattc
     1501 tgcctgccac ccttttgtcg ttgccccgaa gataggggcc atgcgcgcga tttcatagat
     1561 cgcggcgcgg gctttcgcgc gggccggggc tttggcataa ccctgcggat gtccgaccgc
     1621 ctgcccatcg aagacgttct gccggcgctt tgcgcggccc tggccgcgca tggccgcgcg
     1681 gttctggtcg cgcctccggg ggcgggcaag acgacgcggg tgccgctggc cctgctggat
     1741 cagatcgcgg gccggatcgt gatgctggag ccgcgccgac tggccgcccg cgccgcagcc
     1801 gagcgtctgg cccatggtct gggcgagggc gtcggcgggc gggtctggta tcgcatccgc
     1861 ggtgaatcgg tgccgggaag ccggatcgag gtcgtgaccg aagccatcct gacccggatg
     1921 atccagtccg acccctcgct ggaaggcgtc ggctgcgtga tctttgacga attccatgaa
     1981 cgcagcctga acgccgatct gggccttgcg ctggtctggg aggcgcgagg cgcgctgcgc
     2041 ccggatctgg ccgttctggt catgtcggcg acgctggcgg ccgggccggt ggcggcgctg
     2101 atggacgacg ccccggtcct gcgttccgag gggcgggcct ggccggtcga gacgcgctgg
     2161 ctggaccggc ccttgccggc ggggatgcgg ctggccgccg aggccgcgcg gctgatcctg
     2221 caggccgagg cggagacccg cgagtcaggc ggcacgatcc tggcctttct gcccggcgaa
     2281 ggcgaaatcc ggcgtgtcat ggggcaactg ggcgcgacgg attgcgaggt tctgccgctc
     2341 tatggcgcgc tggatgccaa ggcgcagcgg gcggccctgt ccccgccggg tgcacggcgg
     2401 cggatcgtgc tggccaccgc catcgccgag acttcgttga cgatcccgca agtgcgggtg
     2461 gtggtggata gcggcgcggc gcggcgcgcg cgcttcgatc cgggcagcgg catgtcgcgg
     2521 ctggtgacc
//
LOCUS       DTVW01000869            4057 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2068874, whole
            genome shotgun sequence.
ACCESSION   DTVW01000869 DTVW01000000
VERSION     DTVW01000869.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 4057)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4057)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4057
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2068874"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..642)
                     /locus_tag="EYO87_11375"
     CDS             complement(<1..642)
                     /locus_tag="EYO87_11375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008840753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrase"
                     /protein_id="HIC66578.1"
                     /translation="MTTLATTLQAFFTDRLIRQRQVSPNTVQAYRDTLRLLLVFASER
                     HGKAPGKLDIDDLDALLIGAFLDHLERERQNGVRTRNARLAAIRSLFRYAALLHPEHA
                     ATIERVLAIPPKRFERRLVTWLTEAEIDALLAAPDRATWTGRRDTALIGLAVQTGLRA
                     SELIGLNCSDLHLGAGAHVSCTGKGRKQRITPLTSGTVAVLRIWIAERAGGPVD"
     gene            complement(639..1138)
                     /locus_tag="EYO87_11380"
                     /pseudo
     CDS             complement(639..1138)
                     /locus_tag="EYO87_11380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008840754.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(1181..1660)
                     /locus_tag="EYO87_11385"
     CDS             complement(1181..1660)
                     /locus_tag="EYO87_11385"
                     /inference="COORDINATES: protein motif:HMM:PF01408.20"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66579.1"
                     /translation="MIKLACFGAGRIGQVHALNAAASPGASLSYIVDPVAGPHAEEIA
                     ARTGASLTDADTVFADATVDGIIIASSTDSHAPLLLRAAEAGKAVFCEKPVSLDFAQV
                     AEATQSVEATGIACMLGFQRRYDPSFRQVRDRIPSGAAGRLEHVAMVSRDPTPPPAS"
     gene            1777..2793
                     /locus_tag="EYO87_11390"
     CDS             1777..2793
                     /locus_tag="EYO87_11390"
                     /inference="COORDINATES: protein motif:HMM:PF00356.19"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HIC66580.1"
                     /translation="MRSKATARDVAREAGASLATVDRVLNNRGGVAPEKEQRVVLAAR
                     RLKLDRALDFRAARTLRIGIFVQPPSNPFHAALAEAAECHNRGPNPFNFEFSVLHVDP
                     GAPNCTARTIREIAGRFDALIICAAEDPEIVVALRGFAATDKPVVALATDFGPDVLHI
                     HVGPDDYRAGMLAGHLMGRFLSREGGKVLVVAGMSLMVGQRQRREGFRAAIAEGFSAI
                     QIVGEVESGENGEKAGLLVARTLSRHPDLRGIYNASADAAEIAEALARVQDRGRRVFI
                     THGLTEDRRRLLRAGAIDAIIDQNPELELRIALEALAERFGRLETGPETTITPVCIHT
                     CENC"
     gene            2865..3896
                     /locus_tag="EYO87_11395"
     CDS             2865..3896
                     /locus_tag="EYO87_11395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007257082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HIC66581.1"
                     /translation="MSSRPTIKDIAAEAGVSTATVDRVLNGRVQVREETVRKVANAAH
                     RIGYHATGLIDQRLVPTMPKMTFGFVLHKGKQEFYRNFAREIEQAVANRRDIHGKALV
                     RFAADQNPESFLQEIDAISGEVDALASSAVNHQNINREVQRLQGQGIPCFALLNDFAQ
                     GVRANYLGLNNMQVGRIAAWLISHTQSEPGKVAVFVGGSRWHGHQLRETGFRSYLRES
                     APDFAVVDTLVNLETRTVTHEATIDLLARHSDLRGIYVAGGGMEGAIAALREVCPPGK
                     VSLVVNELTEESRAGLVDGYVTMVIATPLAQLCADLVEMMFNAVRTGSSETPGQHFLE
                     PRLYLPESI"
BASE COUNT          711 a         1258 c         1370 g          718 t
ORIGIN      
        1 gtccacgggc ccgcctgcgc gctcggcgat ccagattcgc aagacggcga cggtgcccga
       61 ggtgagcggc gtgatccgct gctttcgccc cttgccggtg cagctgacat gcgcgccggc
      121 cccgagatgg aggtcggagc aattgagccc gatcagttcg gacgcccgaa ggcccgtctg
      181 gacggcgagg ccgatgagcg ccgtgtcgcg ccgcccggtc caggtcgccc ggtccggcgc
      241 ggccagcagg gcgtcgatct ctgcctcggt cagccaggtc accagccgtc gctcgaagcg
      301 tttcggcggg attgccagca cccgttcgat ggttgcggcg tgttcgggat ggagcagggc
      361 ggcgtagcgg aacagggagc ggatcgcggc cagtcttgcg ttgcgggtgc gcaccccgtt
      421 ctgtcgttct cgctccagat ggtcgaggaa agcgccgatc aggagcgcat cgagatcgtc
      481 gatgtcgagc tttcccggcg ccttgccgtg ccgctccgac gcgaagacca ggagcaaccg
      541 cagcgtgtcg cgataggctt gaaccgtgtt cgggctgacc tggcgctggc ggatgaggcg
      601 gtcggtgaag aatgcctgca gggtcgtggc gagcgtagtc atgcgtcacc cgccaagtgg
      661 cgctcgagcc tttcgccgac cagtgccaga agttctggcg cggccgacag gtaccagtag
      721 gtggcgccgg gatcggcatg accaagatag gtggacagga tcgcgaggcg ggagccgggt
      781 cgtctgtccg gtagtcgtct gcgatggtgc tgacggcgaa gctgtgtcga agatcgtgga
      841 tcctgggtcg gcatactgcg gaacgcggaa cgatggcgca gtgatgcagg agcttgtgga
      901 agacccagtg cacggttcca tagcgcagcc gtttgccgcg cgagctgatc agcaggaccg
      961 gcgggccctc aggacggggt cggtcatcga ggcgcagata ggcgtcgagg gctgcgacgg
     1021 ccgtcgggtg cagcggcaag gcacgcgcct tgtcgaactt tccgtgccgg atcgtcacca
     1081 tgccgccgct cgcgtcgaag tcgccctgat cgaggccgat tgcctcgccg atccgcatgc
     1141 cggtcaccgc cagcagaccg atcaaggtcc ggtaggtcgc ctaggaggcg ggcggcggcg
     1201 tcggatcgcg ggagaccatc gcgacatgtt cgagcctgcc ggccgcgcca ctggggatgc
     1261 gatcccgcac ctgccggaag ctcgggtcgt agcgccgctg gaagcccagc atgcaggcga
     1321 tgccggtcgc ttcgaccgat tgggtggctt cagccacctg cgcgaaatcg aggctgacgg
     1381 gcttttcgca gaacaccgcc tttcccgcct cggccgcgcg cagaagaagc ggggcgtgac
     1441 tgtcggtcga gcttgcgatg atgatgccgt cgaccgtggc gtctgcgaag acggtatcgg
     1501 cgtcggtcag actcgcaccg gtgcgtgctg caatctcttc cgcgtgcggg cccgcgaccg
     1561 gatcgacgat ataggaaagg ctcgcgccgg gcgatgccgc ggcgttgagc gcgtgaacct
     1621 ggccgatgcg gcccgcgccg aaacaggcga gtttgatcat gagggtcctc ccttcgtcgc
     1681 ggccgttctc ctccgaaagc cacctgtcgc ctctttacga ttgccgtcgt gggggcgata
     1741 catcggcatt gatgaaatct catcaagcga ggcgtcatga gatcgaaggc gaccgcgcgc
     1801 gatgtcgccc gggaggcagg cgcgtcgctg gcgaccgtgg acagggtgct gaacaatcgc
     1861 ggcggcgtcg cgcccgagaa ggagcagcgc gtggtgctcg cggcgcggcg tctgaagctc
     1921 gaccgtgcgc tcgatttccg cgccgcgcgc acgctccgca tcggtatctt cgtgcagccg
     1981 ccgtcgaatc cgtttcacgc ggcgttggcc gaggcggccg agtgccataa ccggggtcca
     2041 aatccgttca acttcgagtt ttcggtgctg catgtcgatc ctggcgcacc gaactgcacg
     2101 gcgcggacga tccgagaaat cgccggccgc ttcgacgcct tgatcatctg cgcagccgaa
     2161 gatcccgaga tcgtcgttgc ccttcgcggc tttgcggcga cggacaagcc cgtggtcgcg
     2221 ctcgccacgg atttcggacc agacgtgctc catatccacg taggaccgga cgactaccgc
     2281 gccgggatgc ttgccggaca cctgatgggc cggttcctga gccgtgaggg cggcaaagtg
     2341 cttgtcgtcg ccgggatgag cctcatggtc gggcagagac agcggcgtga aggctttcgg
     2401 gccgcaatcg ccgagggctt ttccgcaatc cagatcgttg gggaggtcga aagcggagag
     2461 aacggcgaga aggccgggct gcttgtggcg cggacgctct cgcgacatcc ggatctccgc
     2521 ggtatctaca acgcctcggc ggatgctgcc gagatcgccg aggcgctggc ccgtgtgcag
     2581 gatcggggcc gccgcgtctt catcacgcac gggctgaccg aggatcgtcg ccgcctgctg
     2641 cgcgccggcg ccatcgatgc gatcatagat cagaaccccg aactcgagtt gcgcattgcc
     2701 ctcgaggcgc tggccgaacg tttcggacgc ctcgagaccg gccccgagac cacgatcacg
     2761 cccgtctgca tccacacatg cgaaaattgc tgaccgagcg acctgttttt cttgcggctc
     2821 tctccccatc agcgctaagc tgcttttgca tcaggagtga ttgaatgtca tcaagaccga
     2881 ccatcaagga catcgctgcc gaagccggcg taagcaccgc cacggtggac cgcgtcctca
     2941 acggacgggt gcaggtgcgc gaggagacgg tgcgcaaggt tgccaacgca gcgcacagga
     3001 tcgggtacca cgcaacgggt ctcatcgatc agcggctcgt tccgaccatg ccgaagatga
     3061 cgtttggttt cgtgctgcac aaagggaagc aggaattcta tcggaatttc gcgcgcgaga
     3121 tcgaacaggc ggtcgcaaat cgccgcgata tccacggcaa agcccttgtc cgcttcgccg
     3181 ccgaccagaa cccggaaagc ttcctgcagg aaatcgacgc gatatccggg gaggtcgatg
     3241 cgctggcgag ttccgccgtc aatcaccaga acatcaatcg cgaggtccag cgtctgcaag
     3301 gtcagggaat tccctgcttt gccctgctga acgatttcgc ccaaggcgtc cgcgcgaatt
     3361 atctcgggct caacaacatg caggtcggcc ggatcgccgc gtggcttatt agtcatactc
     3421 agagcgagcc gggcaaggtt gccgtcttcg tcggcggcag ccgctggcac ggccatcaac
     3481 tgcgcgagac tgggttccgt agctatctgc gcgaaagcgc gcccgatttc gccgtcgtcg
     3541 acacgctcgt gaacctcgag acgcgcaccg tcacccacga agcgaccatc gaccttctcg
     3601 cgcgccattc cgatctgcgt ggaatctacg tggccggcgg cgggatggag ggtgccatcg
     3661 cggccctgcg cgaggtttgt cctcctggaa aggtgtctct cgtggtgaac gaactgaccg
     3721 aggaaagccg cgccggactg gtggacggct atgtcacgat ggtcattgcg acgcccctcg
     3781 cgcagctttg tgccgacctg gtcgagatga tgttcaacgc ggtgcgcaca gggtcttccg
     3841 agacccccgg ccagcacttc ctggaaccca ggctctattt gccggaatcg atctgagcga
     3901 cttgatgtta ttacatcata taggcggttg aaaaatacgg cataaatgat gtaaaataca
     3961 tcgttatgat tgaccgaatc ctctccctag tgtcatgaat gcccgtgcca aggaggcgtg
     4021 gggctgaacc cacgggcaag ggggaggagc ccgcgac
//
LOCUS       DTVW01000870            1377 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2069493, whole
            genome shotgun sequence.
ACCESSION   DTVW01000870 DTVW01000000
VERSION     DTVW01000870.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1377)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1377)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1377
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2069493"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>1377
                     /locus_tag="EYO87_11400"
     CDS             <1..>1377
                     /locus_tag="EYO87_11400"
                     /inference="COORDINATES: protein
                     motif:HMM:PF00593.22,HMM:PF07715.13"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HIC66582.1"
                     /translation="VSVIVAAALADRTAQPIADSIAELPGVAIRQSGPLGTTGALQVR
                     GAPPEYTPVLIDGIDVSDPAAGQPYFDIGGLITAGVGRIELLRGTQSALYGSRAIAGV
                     LSIDTMRPTEDGLRQNFAIEAGQYQTFAASYGAALRRDGTDLAFTASRVTSQGFSARD
                     ENDGNFETDSYNASLLSFYAARELQNGGKVGINGFWDKSRAEFDEFGGDMTGTPGDEY
                     TTRKSYGLRAFAEVTTGSIDQSLALTRYRIDRRSWSNGVETPFIGSRTKVSWQGATDL
                     GTTGARAILGADTEKEKADGMGDSRISGVFAEVDAPIGSDIDLSASLRRDDHSRFGGF
                     TSGRVSAVWRARPDLLVRAAIGTGFRAPSLYELFGPYGDAGLDREESRTAEIGVEKRW
                     GDDSYLRATAFWLQAENLIGFDADATACGQLFGCYAQVQGQSRRRGIELDGRWAIGAA
                     TAIRGSYT"
BASE COUNT          239 a          471 c          445 g          222 t
ORIGIN      
        1 ggtttcggta atcgttgcgg ccgcgctggc cgatcgcacc gcccagccga tcgccgacag
       61 catcgccgaa ctgcccggcg tggcgatccg ccagtccggg ccgctgggca cgaccggcgc
      121 gcttcaggtg cgcggcgcac cgcccgaata tacgccggtc ctgatcgacg gaatcgacgt
      181 ttcggacccg gcggcgggcc agccctattt cgatatcggc ggactgatca cggccggcgt
      241 cggccggatc gaattgctgc gcggcacgca atcggcgctt tacggatcgc gcgccatcgc
      301 cggcgtgttg tcgatcgaca ccatgcgccc gaccgaggac ggattgcgcc agaatttcgc
      361 catcgaggcc ggccaatacc agaccttcgc cgcaagctac ggcgcggctc tgcgccgtga
      421 cggcacggac ctggccttca ccgccagccg cgtgaccagc cagggattct cggcccgcga
      481 cgaaaacgac ggcaacttcg agaccgacag ctacaacgca tcgctcctgt ccttctatgc
      541 cgcgcgagag ctgcaaaatg gcggcaaggt cggcatcaac ggcttctggg acaagagccg
      601 cgccgaattc gacgaattcg gcggcgacat gaccggcacg ccgggcgacg aatacaccac
      661 ccgcaaatcc tacggcctgc gcgccttcgc cgaggtcacg accggatcca tcgatcaaag
      721 ccttgccctg acccgctatc ggatcgaccg gagaagctgg tcgaacggcg tcgaaacgcc
      781 cttcatcggg tcccgcacca aggtgtcatg gcagggcgcg accgacctgg gcacgaccgg
      841 cgcacgcgcg atccttggcg ccgataccga gaaagagaag gccgatggca tgggcgacag
      901 ccgcatcagc ggggtctttg ccgaagttga cgccccgatc ggcagcgata tcgatctcag
      961 cgcctcgctg cgtcgtgacg atcattcgcg ctttggcggc ttcacctcgg gccgggtctc
     1021 ggccgtctgg cgggcacggc cggacctgct ggtccgcgcc gccatcggaa ccggctttcg
     1081 tgcgccctcg ctctatgagt tgttcggccc ctacggcgat gccgggctgg atcgagagga
     1141 aagccgcacc gccgagatcg gggtcgagaa acgctggggc gatgacagct atctgcgcgc
     1201 caccgccttt tggcttcagg ccgagaacct gatcggcttc gatgccgatg ccacagcatg
     1261 cggccagctt ttcggttgct atgcacaggt ccagggccag tcgcgtcggc gcgggatcga
     1321 actggatggt cgctgggcca tcggcgcggc caccgcaatt cggggttcct ataccta
//
LOCUS       DTVW01000871            1028 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2072367, whole
            genome shotgun sequence.
ACCESSION   DTVW01000871 DTVW01000000
VERSION     DTVW01000871.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1028)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1028)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1028
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2072367"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            250..>1028
                     /locus_tag="EYO87_11405"
     CDS             250..>1028
                     /locus_tag="EYO87_11405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HIC66583.1"
                     /translation="MRHSVRGQVDPFIVMDVMEAASRAEAEGRHIIHMEVGQPGTPAP
                     QGARKALARALDQPLGYTGALGLPQLRQGIAGLYRRWYGVELDPARVVVTPGSSGAFI
                     LAFSALFDAGDRVAMGYPGYPSYRQILRAMSLEPVGIPTRSVDRYQPRPQELPRAEGL
                     ILASPGNPSGTVLRLDELQALTDAARGRGMAVISDEIYHGLSYGDRCHSALEVTDEVF
                     VVNSFSKYFSMTGWRIGWMVVPDSHLRIVERLAQNLFICPP"
BASE COUNT          183 a          312 c          344 g          189 t
ORIGIN      
        1 actcccccga ggtatttgga aagagcgcga gggcgtggag atttccttgc gggatagcat
       61 cccggcatcc agtttcaggc ggaccagagc ggcgaacggg catgatgccg gcatttctgc
      121 gatttgcggc aatcgtgaag aatccggcca gaaatgcggg tagaaggctg catgagcccg
      181 ccaaaaggct agagccggga cgtggctcgc ggtagaaggc gcaaaacgaa agatcgaggc
      241 aggcagcaaa tgcgacattc cgttcgcggg caggtggacc cattcatcgt catggacgtg
      301 atggaggccg cctctcgcgc cgaggccgag ggccgccaca tcattcatat ggaggtcggc
      361 cagcccggca cccccgcccc gcaaggtgcc cgcaaggcgc tggcgcgcgc gctggaccag
      421 ccgctgggct ataccggggc attgggtctg ccgcaattgc ggcaggggat cgcggggctt
      481 taccggcgct ggtatggtgt cgaactggat cccgcgcgcg tggtcgtcac ccccggcagc
      541 agcggcgcct tcattctggc tttttccgcg ctgttcgatg cgggcgaccg ggtagcgatg
      601 gggtatcccg gctatccctc gtatcgccag atccttcgag ccatgtcgct ggaacccgtg
      661 ggcatcccga cgcggtctgt cgaccgctac cagccgcggc cgcaggaatt gccacgggcc
      721 gaggggctga tcctcgcctc gccgggcaat ccgtccggaa cggtgctgcg gctggacgaa
      781 ttgcaggcgc tgaccgacgc cgcccggggg cgcggcatgg cggtcatctc ggacgagatc
      841 tatcacgggt tgtcctatgg tgaccgctgc cattccgcgc ttgaagtgac ggacgaggtt
      901 ttcgtcgtaa attccttcag caaatacttt tccatgactg gatggagaat aggctggatg
      961 gtcgttcccg acagccatct gcgaatcgtc gaacgtttgg cgcagaacct gttcatctgc
     1021 ccgcccca
//
LOCUS       DTVW01000872            1068 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2073312, whole
            genome shotgun sequence.
ACCESSION   DTVW01000872 DTVW01000000
VERSION     DTVW01000872.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1068)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1068)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1068
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2073312"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
BASE COUNT          168 a          329 c          383 g          188 t
ORIGIN      
        1 cgccgccttg gcctttgggc tttggaaggg ctatctgccc ctggtcatcg ccgccttcat
       61 cggcctggcc gtggcgcaaa acatctggcg gccgatcctg atcagccgga tcgatgccca
      121 aggctcgccc gaggcggggg ccactgttct ttccatcgag gcccaggcaa aatcgttctt
      181 cgccatgctt ctcgcgccgg ccgtcggttt tgccgtggac cggttggggc tcgtaccggt
      241 cgccgtggcc gggctcctgg tggcgttgcc gttcaccttg cgcggttttc tccgcgcgga
      301 agagaaaatc cgcgaagccg cgcaccagcc ctagcggaca gcttccattt ttcagtacat
      361 gagataagcg ggggacctcc cgccgtttgt ggctagaggg ccaactggcc ctcggtgggt
      421 tccgctcagc agaaccacga ttcggtgagg cggggtggac ggaggcgatc cggtgcgagg
      481 gaggggggcg accccgcgcg atcgggccgc tccaagatgg cggcggcggc cccgcgaatc
      541 cgcccgaagg tgagggcggg gtcttcgtca ttttcggcgg cctcctcggc gatggcgagg
      601 gtttccccgt ggagccgatc catgcgcggg tccgggtggg tccagcggtg gatgaagttt
      661 tccggatcga actccccgag atggggcaca agcgcgggcc ggcccagcag gttcgagccc
      721 ggcgggataa gcagccggat ggcgtactgg atcgggtcca cctcgtcgat gagaccgaac
      781 tcttccacga aatcaagcac gtcgaggtaa tcatccgccg tggtccaggg agtgaaggat
      841 acgagggtgg gccggatgga gatgcccgcc gctcgggcgg cccgaacggc gcgcccggcc
      901 tcggcgcggg tgtgtccctt gacgagttgt tcgaggaccc catcgctcag ggattcgagg
      961 gcggtgacga taaacacgca ccccagggcg cccagctcga agagcaggtc ttcgtgccgc
     1021 gccaggtgct cgaccttggc cgtgaaatcg aaggtgagcg cggggaaa
//
LOCUS       DTVW01000873            1141 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2074269, whole
            genome shotgun sequence.
ACCESSION   DTVW01000873 DTVW01000000
VERSION     DTVW01000873.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1141)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1141)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1141
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2074269"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..169
                     /locus_tag="EYO87_11410"
     CDS             <1..169
                     /locus_tag="EYO87_11410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007427864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="polyketide cyclase"
                     /protein_id="HIC66584.1"
                     /translation="DFWKVVEGRITDNWVMVDFPHVLAQLGVDVFGGEGWEAFDRGEA
                     TPPPPQQGATA"
     gene            166..>1141
                     /locus_tag="EYO87_11415"
     CDS             166..>1141
                     /locus_tag="EYO87_11415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009178398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyketide cyclase"
                     /protein_id="HIC66585.1"
                     /translation="MRDAAQDRHTGHKARIAPLRAAQYDFSESGVRATLERAFAQDAA
                     IRLAFPFGDMTGAAEFYDRAYAPLLAAIPDLERRDTIVMAGPTPEGADWVGCGGYYTG
                     TFVAPWLDIPPTGHQVHMRFHEFYRFEDGRVAEFQGLWDIPEVMMQAGAWPMVPSLGR
                     EWHVPAPATQDGIVAGPWDEARGMATCRHIIDMLEHMKRHPGQGGPEVMQMDRFWHPR
                     MNWYGPSGIGTGRGIKGFRNWHQIPFLAGMPDRGTYIDQIDYHFFGDHDYAAVTGWPN
                     MIQTITQGGWLGIAPNDKRITMRSLDFWRLEKGLIRENWVLVDLLDMYD"
BASE COUNT          205 a          354 c          383 g          199 t
ORIGIN      
        1 ggatttctgg aaggtcgtgg agggccgcat caccgacaac tgggtgatgg tcgatttccc
       61 ccatgtgctg gcgcaactgg gcgtcgacgt gttcggcggc gagggatggg aggcctttga
      121 ccggggcgag gccacgcccc cgcctccgca gcagggggca acggcatgag ggacgcggca
      181 caggaccgtc acaccggcca caaggcaagg atcgcgcccc tgcgcgcggc gcagtatgat
      241 ttcagcgaat ccggcgtccg cgccacgctg gagcgtgcct ttgcgcaaga cgcggcaatc
      301 aggctggcat ttccctttgg cgacatgacc ggggctgccg agttctatga ccgggcctat
      361 gcgccgctat tggcggcaat tcccgatctg gaacggcgcg acaccatcgt catggccggg
      421 ccgacgcccg aaggcgcgga ctgggtcggc tgcggcggct attacaccgg cacctttgtc
      481 gcgccctggc tggacatccc gccgaccggc catcaggtcc atatgcggtt tcacgaattc
      541 taccgtttcg aagatggccg tgtcgccgaa ttccagggcc tgtgggacat ccccgaggtc
      601 atgatgcagg ccggcgcatg gccaatggtg ccctcgctgg ggcgcgaatg gcatgtgccc
      661 gcgcccgcga cccaggacgg catcgtggcc ggaccgtggg atgaggcgcg tggcatggcg
      721 acctgccggc acatcatcga catgctggaa catatgaaac gccatccggg gcagggcggg
      781 ccggaagtga tgcagatgga tcgcttctgg cacccgcgga tgaactggta cggcccctcg
      841 ggcatcggca ccggcagggg catcaagggt ttccgcaact ggcaccagat tcccttcctg
      901 gccggaatgc ccgaccgcgg gacatatatc gatcagatcg actatcactt ctttggcgat
      961 cacgattatg ccgccgttac cggctggccc aatatgatcc agaccatcac ccaaggcggc
     1021 tggctgggga tcgcgccgaa cgacaagcgg atcaccatgc gcagcctcga tttctggcgg
     1081 ctcgagaagg gcctgatccg cgagaactgg gtattggtgg atctgctgga catgtatgat
     1141 c
//
LOCUS       DTVW01000874            1169 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2074583, whole
            genome shotgun sequence.
ACCESSION   DTVW01000874 DTVW01000000
VERSION     DTVW01000874.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1169)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1169)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1169
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2074583"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>1169
                     /locus_tag="EYO87_11420"
     CDS             <1..>1169
                     /locus_tag="EYO87_11420"
                     /inference="COORDINATES: protein motif:HMM:PF08206.9"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="RNB domain-containing ribonuclease"
                     /protein_id="HIC66586.1"
                     /translation="IHRGTFRGHREGYGFVIVEADGKRGGKKEADIFIKRGRISGAMD
                     GDLVAARVERTSPDGRREGSVVEILERAHTTLVGRLAADRQRAWVEPHEHRIPHIILI
                     SPSMRGGARTGEWVEVELETYPAPRREARGKIIRSFGYPDDPAVEQEMIIAKAGIRDL
                     FSDKALKEAEALQPPAEDEPFPRGVEDLRDLEAFTIDPRTARDRDDAISIETLPGGIR
                     RLGIHIADVSHYVRAGSEIDEEAALRGNSVYFPDRAIPMLPPHLSGHVCSLAGGEVRR
                     TLSAFLDFDAKGRRVGFRLTVARIRSRAPLTYAGAGAVLEEREIPERDEYECALALRA
                     PLAELAALACQLRARRVAEGSLDFELPEPIIVLDKKGRPLSVDRAPRNAAHRLVE"
BASE COUNT          189 a          403 c          393 g          184 t
ORIGIN      
        1 catccaccgg ggcacgtttc gcggccaccg ggagggctac ggttttgtca tcgttgaggc
       61 tgacgggaag cggggcggaa aaaaagaggc cgatattttc atcaagcggg gccgcatcag
      121 cggcgccatg gacggcgatc tcgtggccgc ccgggtggag cggacctccc cggacggccg
      181 ccgcgaggga agcgtcgtcg agattctaga gcgggcgcac accaccctcg tcggccgcct
      241 cgccgccgac cggcagaggg cctgggtcga gccgcatgaa catcgcatcc cgcacatcat
      301 cctgatctcg ccctcgatgc ggggcggcgc ccggaccggc gaatgggtcg aggtcgaact
      361 ggagacctat ccggcccccc gccgggaggc acgcggaaaa attatccgat cgttcggcta
      421 cccggacgat ccggccgttg agcaggagat gatcatcgct aaggcgggca tccgtgatct
      481 gttttccgat aaagccctca aagaggccga agcccttcag cccccggcgg aggatgaacc
      541 cttcccccga ggggtggagg atctgcgtga tctggaggcg ttcacgatcg acccccggac
      601 ggcccgtgac cgcgacgacg ccatttccat cgaaacgctg cccgggggga ttcgccgcct
      661 cggcatccac atcgccgacg tgagccacta cgtccgcgcg ggttcggaga tcgatgagga
      721 agccgccctg cgcgggaaca gcgtctactt cccggaccgg gcgataccca tgctgccccc
      781 tcatctttcg ggccatgtgt gctccctggc cggaggggag gtgcgccgga ccctctccgc
      841 gttcctggac ttcgacgcca agggccggcg cgttggcttc cgcctcacgg tcgcgcggat
      901 tcgatcgcgc gccccgctca cctatgccgg ggcgggcgcc gttctcgagg agcgggagat
      961 ccccgagcgg gacgaatacg agtgcgccct tgcgcttcgc gccccgcttg cggagcttgc
     1021 cgcgctggcc tgccagctcc gcgcccggcg cgtcgccgag ggcagcctgg attttgaatt
     1081 gcccgagccg attatcgtcc tggataaaaa aggccgcccc ctctcggtgg accgggctcc
     1141 gcgaaacgcc gcccaccgac tggtcgagg
//
LOCUS       DTVW01000875            1356 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2074937, whole
            genome shotgun sequence.
ACCESSION   DTVW01000875 DTVW01000000
VERSION     DTVW01000875.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1356)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1356)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1356
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2074937"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..543
                     /locus_tag="EYO87_11425"
     CDS             <1..543
                     /locus_tag="EYO87_11425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010392734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HIC66587.1"
                     /translation="ADGVPADQVYDVLSTQEGVDQAFAKLAEIKSDVIWWEAGAQPPQ
                     LLADGEVTMAYAFNGRIFNAAQGEGKPFRIIWDGQIYEMEGWVMPKGAPNKDEAMKFI
                     TFSTSPEPQARAAEFISYGPPRKSAAALVGNIEGTDQPMGPNLPTTEANMTDALGSDL
                     DFWVDHDAELNERFNSWLAG"
     gene            650..>1356
                     /locus_tag="EYO87_11430"
     CDS             650..>1356
                     /locus_tag="EYO87_11430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HIC66588.1"
                     /translation="MKKVLILTTAMVGLGHAALADEGEVNVVSWGGAYEMSQVEAYNK
                     PFNEKTGIKVNMIAADNPATPLKAQVEANNVTGDVFDIEVSDAIRLCDEGALVEIDPA
                     NLPAAPDDTPASQDFIDGALQDCAVANIFWGTVIAFDKTKYQGDAPKTAADFFDTEKF
                     PGKRGLPKNPKRTLYLALIADGVAPDQVYDKLGTQEGVDQAFAKLDTIKNDVVWWEAG
                     AQPVQLLADGEVSMTTG"
BASE COUNT          285 a          409 c          435 g          227 t
ORIGIN      
        1 gccgatggcg tcccggccga tcaggtctat gatgtcctgt ccacgcaaga gggggtcgat
       61 caggctttcg ccaagctggc agagatcaag tccgatgtca tctggtggga ggccggcgcc
      121 cagccgccgc aactgctggc cgatggcgag gtgacgatgg cctatgcctt caacggccgc
      181 atcttcaacg ccgcgcaggg cgagggcaag ccgttcagga tcatctggga cggccagatc
      241 tatgaaatgg agggctgggt gatgccgaaa ggcgcgccca acaaggacga ggcgatgaaa
      301 ttcatcacct tctcgacctc gcctgaaccg caggcgcggg cagcggaatt catcagctat
      361 ggtccgccgc gcaaatcggc cgccgcgctg gtcggaaata tcgaggggac cgatcaaccg
      421 atgggtccca atcttccgac gaccgaggcg aacatgaccg acgcgcttgg ttcggacctg
      481 gatttctggg tcgatcatga cgcggaactg aacgaacggt tcaacagctg gcttgccggc
      541 taggccgtct cgggcgcggg cgccgggatg gtcccggcgt ttgcgcaaga cttgaagatt
      601 gaacgacaac ggcttggaaa tgccggaagt tcacgacagg gagtgcaaga tgaagaaagt
      661 tctgatcctg accacagcaa tggtcggtct gggccatgcg gcccttgcgg acgagggcga
      721 ggtcaacgtg gtgtcctggg gcggcgccta cgagatgtcg caggtcgagg cctataacaa
      781 gccgttcaac gaaaagaccg gcatcaaggt caacatgatc gccgccgaca accccgccac
      841 gccgctgaag gcccaggtcg aggccaacaa cgtcaccggc gatgtcttcg atatcgaggt
      901 ttctgacgcg atccgcctgt gcgacgaggg cgcgctggtg gaaatcgacc cggccaacct
      961 gcccgccgcg cccgatgaca ccccggcatc ccaggatttc atcgacggtg ccttgcagga
     1021 ttgcgccgtc gccaacatct tctggggcac cgtcatcgcc tttgacaaga ccaagtacca
     1081 aggcgacgcg cccaagacgg ccgccgattt cttcgacacc gagaagtttc ccggcaagcg
     1141 cggtctgccc aagaatccca agcgtacgct gtatctggcg ctgatcgccg atggcgtggc
     1201 gccggatcag gtctatgaca agctgggcac gcaggaaggc gtcgaccagg cctttgccaa
     1261 gctcgacacg atcaagaatg atgtcgtctg gtgggaagcc ggcgcccagc cggtgcaact
     1321 gctggccgat ggcgaagtgt ccatgaccac cggcta
//
LOCUS       DTVW01000876            1002 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2076290, whole
            genome shotgun sequence.
ACCESSION   DTVW01000876 DTVW01000000
VERSION     DTVW01000876.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1002)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1002)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1002
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2076290"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..631
                     /locus_tag="EYO87_11435"
     CDS             <1..631
                     /locus_tag="EYO87_11435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007798688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HIC66589.1"
                     /translation="TGVAGAFSRELLLYAGGNTALMLIAGAVTSFVLGMGMTVTACYI
                     FLSILLAPALVQAGLNSIASHLFILYWGMLSYITPPVALAAITAANVAGSKPMQTGFH
                     AMRLGMPLFVLPFIFVYDPALIMEGTWLQILERVALTLVAIWAITSAFEAWIYKVGKI
                     GALSRVAFGLGGVLILFPELTTSLIGAAVLLAVIAINLGLGRRRSAVKA"
     gene            655..>1002
                     /locus_tag="EYO87_11440"
     CDS             655..>1002
                     /locus_tag="EYO87_11440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007798690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacid CoA-transferase subunit A"
                     /protein_id="HIC66590.1"
                     /translation="MDKSVTGLESAVAPIPDGASVMIGGFGSSGIPFGLIDALLEQGA
                     TGLTVISNNAGAGETGIAKLLKAGRVARIICSYPRSPGSIWFEKRYEAGEVELEVVPQ
                     GTLAERIRAAGAGL"
BASE COUNT          155 a          329 c          328 g          190 t
ORIGIN      
        1 caccggcgtc gccggggcat tctcccgcga gctgctgctc tatgccggcg gcaacacggc
       61 gctcatgctg attgccggcg cggtgacgag ctttgtgctt ggcatgggga tgacggtgac
      121 cgcctgctac atcttcctgt cgatcctgct ggcacccgcg ctggtgcagg ccgggctcaa
      181 ctcgatcgcc agccacctct tcatccttta ctggggcatg ctgtcctaca tcaccccgcc
      241 ggtggcgctg gccgcgatca ccgccgcgaa tgtcgccgga tcgaagccca tgcagaccgg
      301 cttccatgcc atgcgccttg gtatgccgct cttcgtgctg cccttcatct tcgtctacga
      361 cccggcactg atcatggaag gcacatggct gcaaatcctc gagcgggtgg cgctgaccct
      421 cgtggcgatc tgggcaatca cctcggcctt cgaggcctgg atctacaagg tcggcaagat
      481 cggcgccttg agccgggtcg cctttggcct cgggggcgtg ctgatcctct tccccgaact
      541 gaccaccagc ctcatcggcg cagcggtgct tctcgcggta atcgccataa acctcgggct
      601 tggacgccgc agaagcgccg tgaaggcgta agtcagaagt caggagacat tcaaatggac
      661 aagagtgtga cgggcctaga gagcgccgtc gccccgatcc ccgacggcgc gtcggtgatg
      721 atcggcggct tcgggtcctc gggcatccct ttcggcctga tcgacgcgct gcttgagcag
      781 ggcgccacgg ggctcacggt gatctcgaac aacgcaggtg ccggcgagac cggcattgcc
      841 aagctgctga aggcgggtcg cgtggcacgg attatctgtt cctacccgcg ctcgcccggc
      901 tcgatctggt tcgaaaagcg ctacgaggcg ggggaggtcg agcttgaggt ggtgccgcag
      961 ggcacgctgg ccgaacgtat ccgggccgcg ggcgccgggc tc
//
LOCUS       DTVW01000877            3667 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2076294, whole
            genome shotgun sequence.
ACCESSION   DTVW01000877 DTVW01000000
VERSION     DTVW01000877.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3667)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3667)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3667
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2076294"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(652..1740)
                     /locus_tag="EYO87_11445"
     CDS             complement(652..1740)
                     /locus_tag="EYO87_11445"
                     /inference="COORDINATES: protein motif:HMM:TIGR03169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridine nucleotide-disulfide oxidoreductase"
                     /protein_id="HIC66591.1"
                     /translation="MSVPESDHPEILLLGGGHANLLATPLLRKALPDARILLIDAAPD
                     AVYSGMIPGLVAGHYGPDEPRVALTDFAARNGIRFLQGRVAGVDPTTRQIALADGAQI
                     AYGLAALDLGSHTAMPGLAGFARHAVPIKPLAGFTARLSLMPTGSNAAIIGGGIAGAE
                     MALALAHRLTGGVTLIEAGPDIAASLGRRTRSRLRSALDRARVQVLTGATVASVEADA
                     VVLADGRRIAGQVTIGIAGARPQDWLARDLPADGAGFVRVLPTLQVEGHPTLFAAGDC
                     AAMIHAPRPKAGVFAVRQAPVLARNLVAAYHGRPLLHYDPQRDYLKIISLGGRTALAE
                     WYGLTLHGRWLWRWKDRIDRRFMDRLQG"
     gene            1891..2343
                     /locus_tag="EYO87_11450"
     CDS             1891..2343
                     /locus_tag="EYO87_11450"
                     /inference="COORDINATES: protein motif:HMM:PF03625.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF302 domain-containing protein"
                     /protein_id="HIC66592.1"
                     /translation="MRKLIAAISLCLAAATGVANADEWVVKSSPDDVATTADRLEAAV
                     ADSPATLLARVDHQAAAAEAGLEMKPATVLIFGNPALGTLLMQANPRVALDLPLRVLV
                     WQDGEETKIGYLAPDALAARYDITGADETLGKIANALDQMTNKAAAAE"
     gene            2536..2769
                     /gene="hfq"
                     /locus_tag="EYO87_11455"
     CDS             2536..2769
                     /gene="hfq"
                     /locus_tag="EYO87_11455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008204623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA chaperone Hfq"
                     /protein_id="HIC66593.1"
                     /translation="MAGDKQNLQDAFLNHVRKAKVPVTIFLINGVKLQGVITWFDNFC
                     VLLRRDGQSQLVYKHAISTIMPGQPISLYENED"
     gene            2770..>3667
                     /gene="hflX"
                     /locus_tag="EYO87_11460"
     CDS             2770..>3667
                     /gene="hflX"
                     /locus_tag="EYO87_11460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase HflX"
                     /protein_id="HIC66594.1"
                     /translation="MAEPTSTEARPTRAYVIHPDLGHARVQRRTPEHALAEAVALAHA
                     LPGIEIVGQEVARLRSPDAGRLFGKGKLAEIGERLSAEEAELVLVDGPVTPVQQRNLE
                     KAWDVKLLDRTGLILEIFADRARTREGVLQVELAALSYQRTRLVRAWTHLERQRGGLG
                     FVGGPGETQIEADRRAIDEQMTRLRRQLERVVRTRTLHRAARARVPYPIVALVGYTNA
                     GKSTLFNRLTGADVMAKDMLFATLDPTMRAVRLPDAGAGAPGRKIILSDTVGFISDLP
                     TELVAAFRATLEEVLAADLILHV"
BASE COUNT          626 a         1215 c         1216 g          610 t
ORIGIN      
        1 ctttcggcac ggcagcgacg gcagcgtcaa tctggcgcgc gatgacctgc tggccgcgat
       61 gccggatttc gccgccgcgg ccagcggcga ctggcgcaac tttccctcga cccagccgat
      121 cttttatcgc aaggaccgcc tgcggcccga ggaacagggg tggttcttct tttccgacac
      181 gcccgaggtg atctattcgc gcagcttcga cggctcatgg cccgcttttg catcctgggc
      241 gcgctttacg gacctcgaga ccggacagag cctgcgcctg gtcaacgtcc atttcgattt
      301 tcgcagcggc cagaaccggc tgcgctcggc gcggctggtg gccagccgga tcgcgccctg
      361 gctggctgcg ggcgaacatg tggtggtggc gggggatctg aacgcgatgg cgggctctgc
      421 cacagccgac attcttcgcg gggcgggcct gtcgctgaca ccggtgcgcg gatccagttt
      481 ccatttcggc cgcggcctga acctgttcgg cgcgatcgac catgtgctgt atgattgcga
      541 cagcgtgctg acggaccgac cggtcgcctt gcgcgacaat ccgggtgggc gctggccctc
      601 ggatcattat ccggtgctgg cgcagatcag gcttggtggc ggcatctgcg atcagccctg
      661 aagcctgtcc atgaagcggc ggtcgatccg gtccttccac cgccacagcc agcggccatg
      721 caaagtcagc ccgtaccatt cggccagcgc ggtccgtcca cccagcgaga tgatcttgag
      781 atagtcgcgc tgcggatcat agtgcagaag cggtcgtcca tgatacgccg ccaccagatt
      841 tcgcgccagg accggggcct gccgcaccgc gaagacgccg gccttggggc gcggggcgtg
      901 gatcatcgcg gcgcaatccc cggcggcgaa cagggttgga tgcccctcga cctgaagcgt
      961 cggcaggact cgcacgaaac ccgcgccatc cgcgggaaga tcgcgcgcca gccagtcctg
     1021 cggccgcgcg cccgcgatac cgatggtcac ctggccggcg atcctgcgcc cgtcggccag
     1081 caccacggcg tcggcctcga ccgaagcgac cgtcgccccg gtcaagacct gcacgcgggc
     1141 ccggtccagc gccgaccgca gccgcgaacg cgtccgccgg cccagacttg ccgcgatgtc
     1201 gggcccggcc tcgatcagcg tgacgccgcc ggtcagccgg tgggccaggg ccagcgccat
     1261 ttcggcaccc gcaatgccgc cgccaatgat cgccgcattg ctgcccgtcg gcatcagcga
     1321 caggcgggcg gtaaagcccg ccagcggctt tatcggcact gcgtggcggg caaagcccgc
     1381 aagtccgggc atcgcggtgt gactgcccag atccagagcc gcaagcccgt aggcgatctg
     1441 tgcgccatcc gccagcgcga tctgccgcgt cgtcggatca acaccggcga cgcgcccttg
     1501 cagaaagcgg atgccgttcc tggcggcaaa atccgtcagt gcgacacgcg gttcgtccgg
     1561 gccataatgc ccggccacca gtccggggat cattcccgaa tagaccgcgt cgggggccgc
     1621 gtcgatcagc agaatccggg catcgggcag ggccttgcga agaagcggtg tcgccagaag
     1681 attcgcatgg ccgccaccca gcagcaggat ttcgggatga tcggattcgg gaacgctcat
     1741 gtcgctatct gaggcaaaac cggcgccgat tgccagtact gaccgcgcaa gccctgatcg
     1801 gcgccccttc gcgaacccga tcgcggctgg caatccgcgt cgcgacggcg caagctgggc
     1861 ttgccgccag aacagcaaag gaacaatgcc atgcgtaaac tgattgccgc gatctcgctc
     1921 tgcctcgccg ccgcgacggg tgtcgccaac gcggatgaat gggtggtcaa gtccagtccc
     1981 gatgatgtcg ccacaaccgc cgatcggctt gaagcggcgg tcgcggacag ccccgccacg
     2041 ctgctggcgc gggtggatca ccaggccgcc gccgccgagg ccgggcttga aatgaaaccc
     2101 gcgacggtgc tgatcttcgg caacccggcc cttggcacgt tgctgatgca ggccaatccg
     2161 cgcgtggcgc tggatctgcc cctgcgcgtc ctggtctggc aggatggtga ggaaacgaag
     2221 atcggctatc tcgcgcccga tgcgctggcc gcgcgctatg acatcaccgg cgccgatgaa
     2281 acgctgggca agattgcgaa cgctcttgat cagatgacga acaaggccgc cgccgcggaa
     2341 tgatccgcaa caggcgcgcg tccgtccgag atcgggaagg ccggatcggc gtccaggccg
     2401 gggcgtcttt ccgccttggc cgcaagcccg atccgcagtt gatttttcat gtggccactg
     2461 tcgcttgcat ggcccgtctt gacggcttag atgtaacttt cgatcgggac agttccaaag
     2521 acgggtaaaa acaagatggc tggcgacaag cagaacctgc aggacgcgtt tctcaaccat
     2581 gtccgcaagg caaaggtgcc ggtcacgatc ttcctgatca atggcgtgaa attgcagggt
     2641 gtgatcacct ggttcgacaa tttctgcgtg cttctgcgcc gggacgggca atcgcagctg
     2701 gtctacaagc acgccatcag cacgatcatg ccgggtcagc cgatctcgct ttacgaaaac
     2761 gaggattgat tggccgaacc cacctcgacc gaggccaggc cgacccgcgc ctatgtgatc
     2821 cacccggatc tgggccatgc gcgcgtgcag cggcgcacgc ccgagcatgc gctggcggaa
     2881 gctgtggcgc tggcccatgc cctgccggga atcgagatcg tgggccagga agtcgcgcgc
     2941 ctgcgcagtc ccgatgcggg acggctgttc ggaaagggca agctggccga gataggcgaa
     3001 aggctgtcgg cggaagaggc cgaactggtc ctggtcgacg gtccggtgac gcctgtccag
     3061 cagcgcaatc tggaaaaggc ctgggacgtc aagcttctgg accggaccgg cctgatcctg
     3121 gaaatcttcg ccgaccgggc gcggacccgc gagggggtgc tgcaggtgga actggcggcc
     3181 ctgtcctatc agcggacccg gctggtgcgc gcctggacgc atctggaacg tcagcgcggc
     3241 ggccttggct ttgtcggcgg ccccggcgaa acgcagatcg aggctgaccg ccgcgccatc
     3301 gacgaacaga tgacccggct gcgccgccag ctggaacgtg tggtcaggac ccggacgctg
     3361 caccgcgcgg cccgggcccg ggttccctat ccgatcgtcg cgcttgtcgg ctataccaat
     3421 gccgggaaat cgacattgtt caatcgcctc accggtgcgg atgtcatggc caaggacatg
     3481 ctgttcgcga cgctggatcc gacgatgcgt gcggtccgtc tgcctgatgc cggcgccggc
     3541 gccccaggcc gcaagatcat cctgtcggat acggtcggct tcatcagcga tcttcccacg
     3601 gaattggtcg cggccttccg tgccacgctg gaagaggtgc tggcggccga tctgattttg
     3661 catgtgc
//
LOCUS       DTVW01000878            1616 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2077781, whole
            genome shotgun sequence.
ACCESSION   DTVW01000878 DTVW01000000
VERSION     DTVW01000878.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1616)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1616)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1616
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2077781"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            137..595
                     /locus_tag="EYO87_11465"
                     /pseudo
     CDS             137..595
                     /locus_tag="EYO87_11465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_345389.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="SulP family inorganic anion transporter"
     gene            609..1463
                     /locus_tag="EYO87_11470"
     CDS             609..1463
                     /locus_tag="EYO87_11470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009818317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HIC66595.1"
                     /translation="MTNPIVALIDGSSYAASVCEHAAWVSARTGAPVDLLHVLGRREG
                     AVPQDLSGAIRLGARTRLLEELAELDAQRSKLATRQGRAMLEDAAELARQSGATEVRT
                     RLLHGDLIETVAKLEPEARAIVIGKRGVAADFAKGHLGSNLERIARVSRKPVLVASRA
                     FRPIARTIIAFDGGDSAMKAVRHVADSPLYRDLAISLITVSEPGPAAQARIEAAQAVL
                     EDAGRKAEARFVRGEPETALPQIIADEEFDLLVMGAYGHSRIRSLMIGSTTTQMIRSC
                     KVPVVLYR"
BASE COUNT          257 a          529 c          543 g          287 t
ORIGIN      
        1 gaagcgttct tccttggtct ccgaccagag ttcgcgcaag atcgccagtc gcgtgttgcc
       61 gccgttgcgg atgatgtagt ggtcctcggc gagcaatcca cgggcaatgg cattgtctgc
      121 acgcatagcg atctcccgca cccatcccag gtcatcctcg gccgtgatgc tggcgacggt
      181 ggccacggtc gtctacaccc acaacctcgc catcggcgtg ctggtcggcg tgttgctgtc
      241 gggcatcttc tttgccgcca agatcgcgca attgttccgc gtgtcctcga cgatctcggc
      301 cgacggacgc aagcgggtct acaagatcga gggtcagctt ttctacggct cggtcgagga
      361 tttcatggcg gccttcgatt tccacgaggc tctggaccgg gtggtgatcg acgtcagccg
      421 cgcccatatc tgggacatca gttcggtcca ggcgctggac atggcgatcc tgaaatttcg
      481 ccgtgacggg gccgaggtcg atctggtcgg gctgaaccgg gcgtccgaga ccatcgtcga
      541 caagctggcg atccacgaca agcccggcgc gatggacaag ctggccgcac attgaggaga
      601 cgcttccgat gaccaacccg atcgtggcgc tgatcgacgg ctcgagctat gcggcctcgg
      661 tctgcgaaca tgcggcctgg gtttcggccc ggaccggcgc gccggtggac ctgctgcacg
      721 tccttggccg ccgcgagggg gccgttccgc aggatctgtc cggcgcgatc cggctgggtg
      781 cgcggacccg gctgctcgag gaactggccg aactggatgc gcagcggtcg aaactggcga
      841 cgcggcaggg ccgggccatg ctggaggatg cggccgaact ggcccgccag agtggcgcga
      901 ccgaggtccg gacccgcctg ctgcacggcg acctgatcga aaccgtcgcc aagctggagc
      961 ccgaggcccg cgccatcgtc atcggcaagc gcggtgtggc ggcggatttc gccaagggtc
     1021 acctgggctc gaatctggaa cggatcgcgc gggtcagccg caagccggtt ctggttgcct
     1081 cgcgcgcctt ccgacccatc gcccgcacga taatcgcctt cgacggcggc gattcggcga
     1141 tgaaggctgt ccgccatgtc gccgacagtc cgctgtatcg cgacctggcg atcagcctga
     1201 tcacggtgtc cgaacccggc cccgccgccc aggcccggat cgaggctgct caggccgtgc
     1261 tggaagacgc gggccggaag gccgaggcgc gcttcgtccg gggcgagccc gaaaccgcat
     1321 tgccgcagat catcgccgat gaggaattcg atctgctggt catgggcgcc tatggccaca
     1381 gccgcatccg cagcctgatg atcggctcga ccaccaccca gatgatccga tcgtgcaagg
     1441 tgcccgtcgt gctctaccgc tgatgcgggc gctttccaga gccgtgtccg agaatgcaga
     1501 tcttctgcgc gacagcgcgg gatttgctgc gcaatccgcc tgtccttcga aaaagcgccg
     1561 tcgcgtgccg taacgtccgg ggtccggccc gcgtaatggc ggatatggcg gtcggc
//
LOCUS       DTVW01000879            2425 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2078768, whole
            genome shotgun sequence.
ACCESSION   DTVW01000879 DTVW01000000
VERSION     DTVW01000879.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2425)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2425)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2425
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2078768"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..371
                     /gene="rph"
                     /locus_tag="EYO87_11475"
     CDS             <1..371
                     /gene="rph"
                     /locus_tag="EYO87_11475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012180120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ribonuclease PH"
                     /protein_id="HIC66596.1"
                     /translation="CDVIQSDGGTRCASITGAWVALRLAANRLMQAGVVTSDPILDHV
                     AAVSCGIYAGQPVLDLDYAEDSEAGTDGNFVMTGGGRLIEVQMSAEGATFSRNEMTGL
                     LDLAEAGMAELVAAQKAAIA"
     gene            368..976
                     /gene="rdgB"
                     /locus_tag="EYO87_11480"
     CDS             368..976
                     /gene="rdgB"
                     /locus_tag="EYO87_11480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007255787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RdgB/HAM1 family non-canonical purine NTP
                     pyrophosphatase"
                     /protein_id="HIC66597.1"
                     /translation="MRRFDGRRLLVATHNAGKLAEMQALLAPFGVTVIGAAEAGLSEP
                     AETEQTFLGNARIKARAAVAATGLPALSDDSGICIDALDGAPGVHTADWAETGHGRDF
                     AMAMERTWRALEDAGAPEPRQAQFRCTLVLMWPDGHDAVFEGTLPGRVVWPPRGAEGH
                     GYDPIFMPEGHDVTLGEMQPALKNSLSHRARAVAKMIEGCFA"
     gene            1127..2284
                     /locus_tag="EYO87_11485"
     CDS             1127..2284
                     /locus_tag="EYO87_11485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005979821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="coproporphyrinogen III oxidase"
                     /protein_id="HIC66598.1"
                     /translation="MSEDWRAGGFGLYVHWPFCAAKCPYCDFNSHVVSRVDQARWADA
                     LASEIARLAAETPGRHLDSIFFGGGTPSLMRPDTVDRVIRAARSAWGFTNAIEITLEA
                     NPTSVEKDRFRGFAEAGVNRLSMGVQALNDPDLRRLGRRHSVAEARAAFDVARDCFSR
                     VSFDLIYARQGQTRAAWRAELREALAMAADHLSLYQLTVEPGTAFGARAAAGKLKDLP
                     DEDVSADMYLETQDICCEFGFPGYEISNHARQGSESRHNLIYWRQGDWAAVGPGAHGR
                     LTLDCGRVATEAVMSPGGWIEAVETHGTGESLRSFLPADEQATEYLLMSMRLAEGMDE
                     ARYHRLSGGVLPEAAVESLFAMGMLRREGGRLIATDQGRPVLNAILRELAT"
     gene            2286..>2425
                     /locus_tag="EYO87_11490"
     CDS             2286..>2425
                     /locus_tag="EYO87_11490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015921548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF454 family protein"
                     /protein_id="HIC66599.1"
                     /translation="MRQIWLLTGFLFMGLGIVGIALPIMPTVPFLLVAAWAFSRSSPR
                     LR"
BASE COUNT          387 a          716 c          893 g          429 t
ORIGIN      
        1 attgcgatgt gatccagtcc gatggcggca cccgctgcgc ctcgatcacc ggggcctggg
       61 tggcgctgcg gctggcggcg aacaggctga tgcaggccgg ggtcgtgacc agcgatccga
      121 tcctcgatca cgtcgccgcc gtcagttgcg gaatctatgc gggccagccg gttctggatc
      181 tggactacgc cgaagacagc gaggcgggca ccgatggcaa tttcgtgatg accggcggcg
      241 gccggctgat cgaggtgcag atgtcggccg agggggcgac cttcagccgc aatgaaatga
      301 ccggccttct ggacctggcg gaagcgggaa tggccgaact ggtcgccgcg cagaaggccg
      361 cgatcgcatg aggcggttcg acggcaggcg cctgctggtt gccacgcaca acgccggcaa
      421 gctggccgag atgcaggcgc tgctggcacc gttcggcgtc accgtcatcg gcgcagccga
      481 agccggcctg tcagagcccg ccgagaccga gcagaccttc ctgggcaatg cccggatcaa
      541 ggcgcgggcc gcggtcgcgg cgaccggcct gcccgcgctg tcggacgaca gcggcatctg
      601 catcgatgcg ctggatggcg cgcccggcgt ccataccgcc gactgggccg aaaccgggca
      661 tggccgtgat ttcgcgatgg cgatggaacg gacctggcgc gcgctggaag atgccggcgc
      721 gcccgagccc cggcaggcgc aattccgctg caccctggtg ctgatgtggc cggacgggca
      781 tgacgcggtg ttcgagggca ctctgccggg ccgggtggtc tggccgccac ggggtgccga
      841 agggcatggc tacgatccga tcttcatgcc ggaggggcat gatgtgacat tgggcgagat
      901 gcagccggcg ctgaagaaca gcctcagcca cagggcgcgg gcggtggcga agatgatcga
      961 gggttgcttt gcataaaata tcggtcggat catccttcca ggcggcgtcg ggctgtcgcc
     1021 cagccttggt caggggcgtt tcggcggtgt ccgccgcgac catggcgatc gcctggctga
     1081 tcggatcgga aatgaaggca gcggtcacgg tgaccgcgat gcgcgcatga gcgaggattg
     1141 gcgtgcggga ggattcgggc tttatgtgca ttggcccttc tgcgcggcga aatgccctta
     1201 ttgcgatttc aacagccatg tcgtgtcgcg ggtggaccag gcacgctggg ccgacgcgct
     1261 ggcgagcgaa atcgcgcggc tggcggccga gacgccgggc cgtcatctgg acagcatctt
     1321 tttcggcggc ggcacgccat cgctgatgcg gcccgacacg gttgaccggg tgatccgggc
     1381 ggcgcgttcc gcctggggtt tcaccaacgc gatcgagatc acgctggagg ccaatccgac
     1441 cagcgtcgag aaggaccggt ttcgcggttt cgccgaggcc ggggtgaacc ggctttcgat
     1501 gggcgtgcag gcattgaacg accctgatct gcggcggctg gggcggaggc attccgttgc
     1561 cgaggctcgg gcggcgtttg acgtggcgcg cgattgcttt tcccgggtga gtttcgatct
     1621 gatctatgcg cggcaaggac agacccgcgc ggcctggcgg gcggaactgc gcgaggctct
     1681 ggccatggcc gcggaccatc tgtcgctgta tcagctgacg gtcgagccgg ggacggcctt
     1741 tggcgcaagg gctgcggcag gcaagttgaa ggatcttcca gatgaggatg tgtcagccga
     1801 catgtatctg gaaacacaag atatttgttg cgagttcggg tttccgggct atgagatctc
     1861 gaaccatgcg cggcagggat ccgagagccg tcacaatctg atctattggc ggcaaggcga
     1921 ttgggcggcc gtcggaccag gcgcccatgg ccggctcacg ctggactgcg gacgggtggc
     1981 gaccgaggcg gtgatgtcgc ccggaggatg gatcgaggct gtcgagacgc atggaaccgg
     2041 cgagtcgctg cgatcgtttc tgcctgccga tgaacaggca acggagtatc tgctgatgtc
     2101 gatgcggctg gccgagggga tggatgaggc gcggtatcac cgcctgtcgg gcggtgtctt
     2161 gcccgaagcc gccgtcgaaa gcctgttcgc gatggggatg ctgcgtcgtg aaggcgggcg
     2221 cctgatcgcc accgatcagg gtcgccccgt cctgaacgcg atcttgcgcg aactggccac
     2281 ctgagatgcg acaaatctgg cttctgaccg gctttctgtt catgggcctg gggatcgtcg
     2341 ggatcgccct gccgatcatg cctacggtgc ccttcttgct ggtcgccgcc tgggcctttt
     2401 cccgaagctc gccgcgattg cgaca
//
LOCUS       DTVW01000880            1905 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2079946, whole
            genome shotgun sequence.
ACCESSION   DTVW01000880 DTVW01000000
VERSION     DTVW01000880.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1905)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1905)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1905
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2079946"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..473)
                     /gene="pyrC"
                     /locus_tag="EYO87_11495"
     CDS             complement(<1..473)
                     /gene="pyrC"
                     /locus_tag="EYO87_11495"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009503556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HIC66600.1"
                     /translation="MTDSLTLRRPDDWHLHLRDGAMLDAVAPHSAGFGRAIIMPNLVP
                     PIVTGAEAAAYRDRILAALPEGSALQPQMTLYLTDTTDPADVVAAHRDGIIRAVKLYP
                     AGATTNSASGVTDMARIRPVLDAMAEAGIPLCVHGEVTDAEVDIFDREAVFIDRVL"
     gene            633..947
                     /locus_tag="EYO87_11500"
     CDS             633..947
                     /locus_tag="EYO87_11500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018000002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic ABC transporter"
                     /protein_id="HIC66601.1"
                     /translation="MNSLNIGQVAGNPMRLWAQMARLSIESQTVIGLRMAGMMGLMVQ
                     SPGEPLRMIAEKQAAASEAIFAMVRVAGSGASADRVLSAGLRPYGKRTRANSRRLTRS
                     RR"
     gene            1005..1763
                     /locus_tag="EYO87_11505"
     CDS             1005..1763
                     /locus_tag="EYO87_11505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020650838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HIC66602.1"
                     /translation="MTRTALITGGAQGIGRGIAVRLVENDWKVAIFDKDAEAVDEVSD
                     TLPGSLALPVDVADEASVHQGFATLADWLAGAGLDLLVSNAGIADPVSGTVEDLSLSE
                     WREWQDSHLTGAFLCIRGAVPLLRRARGSIVTIASTRALQSEPDCEAYAAAKGGLCAL
                     THALAISLGPQIRANCILPGWIETGPWQKRSERSDPDHSRSDKAQHPVGRVGTPQDIA
                     ALVAYLASSEEAGFVTGQHFVVDGGMTRKMIYLE"
BASE COUNT          327 a          598 c          640 g          340 t
ORIGIN      
        1 agcacgcggt cgatgaagac ggcctcgcgg tcgaagatat cgacctccgc gtcggtgacc
       61 tcgccgtgaa cgcaaagcgg aatgcccgcc tcggccatcg cgtccagaac cggccggatc
      121 cgggccatgt cggtcacgcc gctggctgaa ttggtggttg ccccggccgg atacagcttg
      181 accgcgcgga tgatcccgtc tcgatgtgcg gcgaccacat ccgccggatc ggtcgtgtcg
      241 gtcagataca atgtcatctg cggctgaagc gcgctgcctt cgggcagcgc ggccaggatg
      301 cggtcgcgat aggcggcggc ctcggccccg gtcacgatcg gaggcaccag attcggcatg
      361 atgatcgcgc ggccgaaacc ggcggaatgg ggcgccacgg cgtccagcat cgcgccgtca
      421 cgcagatgca ggtgccaatc gtcggggcgg cggagggtca ggctgtcggt catgatgcct
      481 gcctctatac acggcagcag acggttgcca agcatgcgcg atccgatttc gcggtgtcgc
      541 cttgaaacag tgccttgtcc ctgccgcccg cccgtcccac attgactcag cagcgtgtta
      601 tgcacattct gcaataatca ggacgggatg gcatgaattc gttgaatatt ggtcaggtag
      661 caggcaatcc catgcgcctt tgggcgcaga tggcacggct ttccatcgaa tcgcagacgg
      721 tgatcgggtt gcgcatggcg ggcatgatgg gcttgatggt ccagtcgccg ggcgaaccgc
      781 ttcgcatgat cgccgagaag caggcggcgg catccgaggc gatctttgcc atggtccgcg
      841 tcgccggcag cggagccagc gccgatcgcg ttctttccgc cggcctgcgc ccctatggca
      901 agcgcacccg cgcgaattcg cgccgtctga cccgcagccg gcgctgaccg ggaacgggtt
      961 cggcccctgg cgtgttttgc cgccggacca gggtgaggac agggatgaca cgcacagcac
     1021 tgattaccgg tggcgctcag ggcattggcc gcggcatcgc cgtccgactg gtcgagaacg
     1081 actggaaggt cgcgatcttc gacaaggacg ccgaggcggt tgatgaggtc tcggacacgc
     1141 ttccaggcag tcttgcgctg cccgtggatg tggccgatga ggcatccgtt catcagggtt
     1201 tcgcgacgct ggctgattgg ctggccgggg cagggctgga tcttctggtc tcgaatgcgg
     1261 gtatcgccga tcctgtcagc gggacggtcg aggatctgtc gctgtcggaa tggcgagaat
     1321 ggcaggacag ccatctgacc ggcgcgttcc tgtgcattcg cggcgccgtg ccgctgttgc
     1381 gccgggcgcg cggttccatc gtcaccatcg cctcgacacg ggctttgcag tcggaacccg
     1441 attgcgaagc ctatgccgca gccaagggcg gactctgtgc gctgacccat gcgctggcca
     1501 tcagtctggg gccgcagatt cgcgcgaact gcatcctgcc cggctggatc gagaccggcc
     1561 cctggcagaa gcggtcagag cgcagcgacc cggatcattc gcggagcgac aaggcacagc
     1621 atccggtcgg ccgcgtcggc acgccgcagg acatcgcggc gctggtcgcc tacctcgcct
     1681 caagcgagga ggcaggcttc gtgaccggtc agcacttcgt ggtcgatggc ggcatgacac
     1741 gcaagatgat ctatctggaa taaagacctg aaggaccaga tgaaaacggc ggggccatag
     1801 ccccgccgcg gcacttttcc ggctgtcccg gtttcagatc agcctgccca tcgcgaccgc
     1861 cgtatcggac atgcggttcg aaaagcccca ttcattgtca tacca
//
LOCUS       DTVW01000881            1651 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_208230, whole
            genome shotgun sequence.
ACCESSION   DTVW01000881 DTVW01000000
VERSION     DTVW01000881.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1651)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1651)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1651
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_208230"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..693
                     /locus_tag="EYO87_11510"
     CDS             <1..693
                     /locus_tag="EYO87_11510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020749073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TOBE domain-containing protein"
                     /protein_id="HIC66603.1"
                     /translation="QRQRVAIGRAIVRTPDVFLFDEPLSNLDAKLRVKMRMELQELHD
                     RLGVTSVYVTHDQVEAMTLADRIVILNGGTVAQIGTPREVYDHPATEFVAGFIGSPAM
                     NFMPAARAGDHWRIEGSDLVLPDAIGLNTTDPALKLGVRPEHLEVFAPETAPSGPWVF
                     DARVKLAELLGADALLNLSVMGQPMLARVGGTDFPLAGGRVRVRIDPERLHAFHPETG
                     LAVTSRSPSSGQ"
     gene            697..>1651
                     /locus_tag="EYO87_11515"
     CDS             697..>1651
                     /locus_tag="EYO87_11515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010150472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase"
                     /protein_id="HIC66604.1"
                     /translation="MVKRPNILFIMADDHASKAIGCYGHGINRTPNLDRIAAEGMRLN
                     HCYVTNSICTPSRAAILTGTYNHVNNVTTLDTPINSRGPNVAKHLRATGYQTALIGKW
                     HLGEGKAHEPSGFDFWSVLPGQGEYFDPYMIEMGREIEVPGYATDIITDKSLDWLKSC
                     DPDKPFFLMCHHKAPHREWEPHPKNRGLYPDDIKVPESFDDDYRNRARAAAEAKMRIK
                     DDMKYIDLGLVQPEGGAEVGERVKPGDSNRKIPNPDDVTAMRLIDRDTGEIFSFATRQ
                     ELHHFKYQRYLKRYLRTIQSVDESVGRLLDWLDETGQADNTI"
BASE COUNT          341 a          519 c          485 g          306 t
ORIGIN      
        1 caacgccagc gcgtcgccat cggccgcgcg atcgtccgca cgccggacgt gttcctgttc
       61 gatgaaccgc tgtccaacct tgacgcgaag ctgcgggtca agatgcggat ggaactgcaa
      121 gaactgcatg accggctggg cgtcacctcg gtctacgtca cccatgatca ggtcgaggcc
      181 atgacgctgg ccgaccgcat cgtcattctg aatggcggca cggttgcaca gatcggcacc
      241 ccgcgcgagg tctatgacca tccggcaacg gagttcgtcg cagggtttat cggcagcccg
      301 gcgatgaatt tcatgccggc cgcccgggcg ggcgatcatt ggcggatcga gggttccgat
      361 cttgtcctgc ccgatgccat cgggctgaat actacggatc ccgccctgaa gcttggtgtg
      421 cgccctgaac atctggaggt gtttgccccc gaaaccgccc cctccggtcc ctgggtgttc
      481 gacgcaaggg tcaagctggc cgagctgttg ggtgccgacg ccctgttgaa cctgtcggtc
      541 atgggccagc ccatgctggc ccgcgtcggc ggcactgatt tccccctggc gggcggccgc
      601 gtgcgcgttc gcatcgatcc ggaacggctg catgcgtttc acccggaaac cggcctggcg
      661 gttacctctc gcagcccatc atcaggacaa tagaccatgg tcaaacgccc caatatcctg
      721 ttcatcatgg ccgacgatca cgcctcgaag gcgatcggtt gctatggcca cggcatcaat
      781 cgtactccca accttgatcg catcgctgcc gagggtatgc ggctgaacca ttgctatgtg
      841 acgaattcga tttgcacacc cagccgtgcc gcgatcctga ccggcaccta taatcacgtc
      901 aacaatgtca ccacgctgga caccccgatc aacagccgcg ggcccaacgt cgccaaacat
      961 ctgcgtgcga caggctatca gaccgcgctg atcggcaaat ggcatctggg agagggcaag
     1021 gcccatgaac ccagcggctt cgatttctgg tcggtcctgc cgggtcaggg cgaatatttc
     1081 gatccctata tgatcgagat gggccgggaa atcgaggtgc ccggctacgc caccgatatc
     1141 atcaccgaca agagcctcga ctggctgaaa tcctgcgatc cggacaagcc attctttctg
     1201 atgtgtcacc acaaggcgcc tcatcgcgaa tgggagccgc atccgaaaaa ccgcggcctt
     1261 tatcccgatg acatcaaggt gccggaaagc tttgacgatg attatcgcaa ccgcgcccgc
     1321 gcggcggccg aggcgaagat gcggatcaag gacgatatga aatatatcga cctggggctg
     1381 gtgcagcccg aaggtggtgc cgaggtcggc gaacgggtga agcccggcga cagcaaccgg
     1441 aaaattccga accctgacga tgtgaccgca atgcgcctga tcgatcggga tacgggcgaa
     1501 atcttcagct tcgccactcg gcaggaactg caccatttca aatatcaacg ctatctgaag
     1561 cgctatctgc gcaccatcca gtcagtggat gaaagcgtcg gccgcttgct ggactggctc
     1621 gacgaaaccg ggcaggccga caatacgatc g
//
LOCUS       DTVW01000882            1063 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2082329, whole
            genome shotgun sequence.
ACCESSION   DTVW01000882 DTVW01000000
VERSION     DTVW01000882.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1063)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1063)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1063
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2082329"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..417
                     /locus_tag="EYO87_11520"
     CDS             <1..417
                     /locus_tag="EYO87_11520"
                     /inference="COORDINATES: protein motif:HMM:PF00072.22"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HIC66605.1"
                     /translation="RAAVPQARILIFSMNDQTGFAARALQAGAQGFLSKNAAPDDFRA
                     AIRTLEAGEFYLSAKQALALATLRAGAAADPLAALSDRERQVLALIGRGFSLQAIADE
                     LDVSYKTAANTSSALKKKLSVDGINGLMKFALDSGV"
     gene            431..943
                     /locus_tag="EYO87_11525"
     CDS             431..943
                     /locus_tag="EYO87_11525"
                     /inference="COORDINATES: protein motif:HMM:PF10649.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2478 domain-containing protein"
                     /protein_id="HIC66606.1"
                     /translation="MLGWFGLDDETKPGEADRTLARLARDLSAAGLRVAGAIQINIDQ
                     GADCACDMEVLVIGEEDRPIRISQSLGGGSAGCRLDPGALEMAAARVGARLAGAELLI
                     VPKFGRQEAVGRGFRAVIAQAVADGLPVLLHVPPEQRDAFAGFCDGMGERVDPAELAG
                     WCLARTTGES"
     gene            949..>1063
                     /locus_tag="EYO87_11530"
     CDS             949..>1063
                     /locus_tag="EYO87_11530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011455520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusA family protein"
                     /protein_id="HIC66607.1"
                     /translation="MPVIDARGLLCPLPVLRLRKVLLDRPAGTRLRLVATDP"
BASE COUNT          156 a          347 c          392 g          168 t
ORIGIN      
        1 cgcgcggccg tgccacaggc gcggatcctg atcttttcaa tgaacgacca gaccggcttt
       61 gcggcccgcg cgttgcaggc gggggcgcag gggttcctgt cgaagaacgc ggcccccgac
      121 gatttccgcg ccgccatccg cacgctggag gcgggcgaat tctatctgtc ggccaagcag
      181 gcgctggcgc tggccacgct gcgcgccggt gccgcggccg atccgctggc ggcgctgtcg
      241 gatcgcgaaa gacaggttct ggccctgatc gggcgcggct tcagccttca ggccatcgcg
      301 gatgaactgg atgtcagcta caagaccgcc gccaatacct cgtcggcgct gaagaagaag
      361 ctgagcgtgg acggaatcaa cggcctgatg aaattcgccc tcgacagtgg cgtctaggga
      421 gatcgcgcag atgctgggct ggttcggact ggatgacgag acgaagccgg gcgaggcgga
      481 ccggaccctt gcccggctgg cccgcgacct ctcggcggcg ggattgcggg tggccggggc
      541 gatccagatc aacatcgatc agggcgccga ttgcgcctgc gacatggagg ttctggtcat
      601 cggcgaagaa gaccgcccga tccggatctc gcaatcgctg ggcgggggct cggccggctg
      661 ccgcctggat ccgggggcgc tggaaatggc cgccgcccgt gtcggcgcgc gactggcggg
      721 ggcggaattg ctgatcgttc cgaaattcgg ccggcaagag gccgtcggac gcggtttccg
      781 cgccgtgatc gcccaggccg tggccgacgg cctgccggtc ctgctgcatg tgccgccgga
      841 acagcgcgac gccttcgccg gcttctgcga cggcatgggc gaacgtgtcg atccagcgga
      901 actggccggc tggtgccttg cacggaccac gggggaatcg tgaccgcgat cccggtcatc
      961 gacgcgcgcg gcctgctgtg cccgctgccg gtcctgcggt tgcgcaaggt cctgctggat
     1021 cgtcccgcgg gcacgcggct gcggctggtc gccaccgatc cga
//
LOCUS       DTVW01000883            6077 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2082693, whole
            genome shotgun sequence.
ACCESSION   DTVW01000883 DTVW01000000
VERSION     DTVW01000883.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 6077)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6077)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6077
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2082693"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(180..1463)
                     /locus_tag="EYO87_11535"
     CDS             complement(180..1463)
                     /locus_tag="EYO87_11535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018000358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 1 protein"
                     /protein_id="HIC66608.1"
                     /translation="MAEAANPEMVSVPLVGWSLAQALRDVADVHLVTQIRNRDAIARA
                     GWVEGRDFTAIDSERVARPLWKFANLLGVGGRTGRGWTVAQAISLFSDAYFERLVWRE
                     FGPRILAGEWDLVHRITPLTPAKPSLVGRRCAKAGIPFVLGPLNGGVPWPRGFERERN
                     REGERFAALRGLIRLIPGRRATWRAARAILVGSRRTQQLIAAPDRSRTVYIPENGITP
                     ERFPWAERPPRRAGPLRACFVGRLVPCKGTDMLLEAAAPLLREGRLHLDMIGDGPMLP
                     DLRGLAESLRIGDAVTFHGWVRHDDVPAIMTACDLLAFPSIREFGGGAVLEAMALGLP
                     PLVVDYAGPGELVEPGWGFKVPLADRDTVIADLRAVLDRIAADPSVLDGLGAAARQRV
                     ERKFLWSRKAGQIRAVYDWVLGRRSEKPAPFETRT"
     gene            complement(1503..2465)
                     /locus_tag="EYO87_11540"
     CDS             complement(1503..2465)
                     /locus_tag="EYO87_11540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018273469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HIC66609.1"
                     /translation="MPRSDPAPDDYVLISPCRNEAAHMRRTLDSVLAQSVPPAKWIII
                     DDGSTDQTPAILVDYARRHDVIEVLTAPDRGHRAVGPGVIEAFYHGLDRVDLAAFPYL
                     CKLDLDLDLPPRYFEILIGRMRDNPRIGTCSGKPWFRNAAGGWVSEKCGDEMSVVMTK
                     LYRRDCFRQIGGFVREVMWDAIDCHKARQLGWIAVSWNDPDLRFEHLRPMGSSQKSVF
                     TGRRRHGFGQYYMGSDPAYFMATGIYRMAHPPYVLGGLATIQGYLGAWLRGARRHEDA
                     ELRRFIRAYQRRALRVGKARATAETEAARAASWQPPAAAGMTGA"
     gene            2815..3447
                     /locus_tag="EYO87_11545"
     CDS             2815..3447
                     /locus_tag="EYO87_11545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013960054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VPLPA-CTERM sorting domain-containing protein"
                     /protein_id="HIC66610.1"
                     /translation="MNILKVLSAGGVLALSVGAANAATYYATDVIASDPGFCDTTRDG
                     GACSKPSRYNPNNAKGAPDGRFYSLGLTTYNDDGSVDDEGSITLGFGTTFPTQQEVGV
                     WEVTYNISPTSRHREAVDVYAIMGGVETLLGRLTNLNGGGKVLAGMGFEYIKLVDATL
                     NEFGRSGTTSFDGFDVDSVSVAPVPLPAAGLMLLAGLGGFGVMRRRQKKA"
     gene            3612..5228
                     /gene="xrtD"
                     /locus_tag="EYO87_11550"
     CDS             3612..5228
                     /gene="xrtD"
                     /locus_tag="EYO87_11550"
                     /EC_number="3.4.22.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010442189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VPLPA-CTERM-specific exosortase XrtD"
                     /protein_id="HIC66611.1"
                     /translation="MTSEIAARQTGVSHPASSYPVSVAGIIALALATIAAGWFFIDGL
                     DALLVAWQTPEYSHGPLIPVLSGLIFLKELRQYPPQPGPIPDRWPGVVVIVLAFLAGT
                     LGKLAEIDDIVAYATIIWVGGIILVSFGWSRGRLFWPAVLHLVFMLPLPATLYYKVSI
                     FLQMVSSELGVSFLKMLSVPVFLEGNIIDLGVMRLLVAEACSGLRYLFPIMSFSYIFA
                     VLYRGPRWHKAVLLLAAVPITVVMNSVRIALAGVIANEYGVETLEGFTHFFEGWVIFV
                     ICIVILFGLAKLMLLFHPGRPSLADALDLETTGMFAQLGRIRLTQPSAAMISAAAIGF
                     LALASWQLIPEARGVQTVRTPFAMFPQQLGDWRQSGPEERLSADIAKTLAADDYRQVT
                     MLSGADVPPVGLFMAFYNDQSKGGVHSPEICLPSSGWEIAELNRIDIAPRLGVNEAFP
                     INRAVIQNGNSRMMVYYWFQQGERRVAWDLAAKFYLLMDGIGRGQTDGGIVRLTTPIR
                     GNESDDAAEARLMDMTRNLLDPLPRFFPVD"
BASE COUNT         1012 a         2066 c         1980 g         1019 t
ORIGIN      
        1 caatactcat gaaaaccatc ctccgaatga cgcgaatcgg caaaatcctc tcgcattcgt
       61 gaagaataga aatccgccac tgcccggcaa tcttgcaatt ctgccagaca atgcaatcaa
      121 ggatataaag cgcagcgata tcagtttatt gaagcgcgcc gccaggcgcg atatcgccgt
      181 caggtgcggg tttcgaaggg ggcgggtttt tcggaccgcc gccccagcac ccagtcatag
      241 accgcgcgga tctgccccgc cttgcgcgac cagaggaatt tccgctcgac ccgctgcctc
      301 gcggccgcgc ccagcccgtc caggaccgag ggatcggccg cgatccggtc cagcaccgcg
      361 cgcagatccg cgatcaccgt gtcgcgatcg gcaagcggca ccttgaagcc ccagccgggt
      421 tcgaccagct cgcccggccc ggcataatcg acgaccagcg gcggcaggcc aagcgccatc
      481 gcctccagca ccgcgccgcc gccgaattcg cggatcgagg ggaaggccag aagatcgcag
      541 gccgtcatga tggccggcac gtcgtcatgg cgcacccagc cgtggaaggt gacggcatcc
      601 ccgatccgca gtgattccgc cagcccgcgc agatcgggca gcatcggtcc gtcgccgatc
      661 atgtccagat gcagccgtcc ctcgcgcagc aggggcgcgg ccgcctccag cagcatgtcg
      721 gtgcccttgc agggcaccag ccggcccacg aagcaggccc gcagcggccc cgcgcggcgg
      781 ggcggccttt cggcccaggg aaagcgttcg ggggtgatgc cgttttcggg aatatagacg
      841 gtccgggacc ggtcgggcgc cgcgatcagc tgctgtgtcc ggcgcgatcc gaccaggatc
      901 gcgcgcgccg cccgccaggt cgcccgccgt cccgggatca gccggatcag cccgcgcagg
      961 gcggcgaaac gctcgccctc gcggttgcgt tcgcgctcga accccctggg ccagggcacg
     1021 ccaccgttca gcgggcccag cacgaagggt atgccggcct tcgcgcagcg ccggccgacc
     1081 aggctgggct tggccggcgt cagcggggtg atgcgatgga ccaggtccca ttccccggcc
     1141 aggatgcgcg ggccgaattc gcgccagacg aggcgttcga aataggcgtc cgaaaacagg
     1201 ctgatcgcct gcgcgacggt ccagccgcgg ccggtcctgc cgcccacgcc cagcaggttg
     1261 gcgaatttcc acaaggggcg ggcgaccctt tcgctgtcga tggcggtgaa gtcgcggccc
     1321 tcgacccatc cggcgcgggc gatggcgtcg cggttgcgga tctgcgtgac cagatgcaca
     1381 tccgccacat cgcgcagcgc ctgcgccagc gaccagccga ccagcggcac gctgaccatt
     1441 tcgggattgg cggcctcggc catcagcaga accctgggcc gcccgtcatc ctgcgtcacc
     1501 gatcaggccc ccgtcatgcc ggcagccgcg ggcggctgcc atgatgccgc ccgcgcggcc
     1561 tcggtctcgg ccgtggcccg ggccttgccg acccgcaggg cgcggcgctg ataggcccgg
     1621 atgaagcggc gcagttcggc atcctcgtgc cgccgggcgc cgcgcagcca ggcccccaga
     1681 tagccctgga tggtcgccag cccgcccagc acatagggcg gatgcgccat ccggtagatt
     1741 ccggtggcca tgaaataggc cggatccgag cccatgtaat attgcccgaa cccgtgccgg
     1801 cggcggccgg tgaagacgct tttctgcgac gatcccatcg ggcgcagatg ttcgaaccgc
     1861 agatccgggt cgttccagct gaccgcgatc cagcccagtt gccgcgcctt gtggcaatcg
     1921 atcgcatccc acatcacttc gcggacaaag ccgccgatct ggcgaaagca gtcgcggcgg
     1981 taaagcttgg tcatgacgac cgacatctcg tcgccgcatt tttccgacac ccagcccccc
     2041 gcggcattgc ggaaccaggg cttgcccgaa caggtgccga tgcgcggatt gtcccgcatc
     2101 cgcccgatca ggatctcgaa gtagcgcggc ggcagatcca gatccagatc cagcttgcac
     2161 agatagggaa aggccgccag gtccacccgg tccagcccgt gatagaaggc ctcgatcacc
     2221 cccggaccca cggcccggtg gccgcggtcg ggcgccgtca gaacctcgat gacatcatgg
     2281 cggcgggcgt aatcgaccag gatggcgggc gtctggtcgg tcgatccgtc atcgatgatg
     2341 atccatttcg cgggcgggac ggattgcgcc agaacgctgt ccagggtgcg gcgcatatgg
     2401 gcggcttcgt tccggcaggg cgagatcagg acgtaatcgt ccggggcggg atcagaacgg
     2461 ggcatcgcga ggactcgcac aggctgctag gggggttccg gctttgtggc gcggcacggg
     2521 cgaaagcgca agcggcccgc gttccgattc gcgccgcccg ggccccgatc cggcgggacc
     2581 ggccgcggcg cggccgtttt gcagccagtg atttcagaaa attatcgtaa tacaacctat
     2641 ggcagcaagg cgcggccggt tttgtctgat attccccccg cggggccaat aaagcgcccg
     2701 tccgcccctt gccgatgctt gtgtgcccct tgccgaaagg ttaaagtttt aacagacaac
     2761 cgcgccgtcg atgaacgcgg ccggtgagca cgtaacaagt acagaggtga ggacatgaat
     2821 attctgaaag ttctttctgc aggcggcgtt ctggcgctgt cggtcggcgc ggcgaacgcg
     2881 gcgacctatt acgcgacgga tgtcatcgcg tccgatccgg gcttttgcga tacgacccgc
     2941 gatggcgggg cgtgcagcaa gccctcgcgc tacaacccga acaatgcgaa gggcgccccg
     3001 gacggccgct tctattcgct gggcctgacg acctataacg acgacggcag cgtggacgac
     3061 gaaggcagca tcacgctggg cttcggcacc accttcccga cccagcaaga ggtcggcgtc
     3121 tgggaagtga cctacaacat cagccccacc agccggcacc gggaagccgt cgacgtctat
     3181 gcgatcatgg gcggcgtcga aaccctgctg ggccgtctga ccaacctcaa tggcggcggc
     3241 aaggtgctgg ccggcatggg cttcgaatac atcaagctgg tcgacgccac gctgaatgaa
     3301 ttcggccgca gcggcaccac cagcttcgac ggcttcgacg tggattccgt ttcggtcgct
     3361 ccggttccgc tgcccgcggc gggcctgatg ctgctggccg ggctgggcgg ctttggcgtg
     3421 atgcgccgcc gtcagaagaa agcctgaccg gcgccatcgc cgaattcgca agaaaagcag
     3481 gggtccgtca gcgatgatgg gccccttcac attccggaat gtctttacct ttttgacaag
     3541 gcgcctgtag cgcgacggtg gcaaaacggc tattctgccc cgggttccca gtgaaagttc
     3601 gtatcatggt catgacgtca gagatcgccg caagacagac tggcgtttcc catcctgctt
     3661 catcctatcc cgtttccgtg gcggggataa tcgccctggc cctggccacg atcgcggcgg
     3721 gctggttctt catcgacggg ctggatgcgc ttctggtggc ctggcagacg cccgaataca
     3781 gccatggccc gctgatcccg gtcctgtccg gactgatctt cctgaaggaa ttgcggcaat
     3841 atccgccgca gcccggcccg attcccgatc gctggcccgg cgtggtcgtg atcgtgctgg
     3901 ccttcctggc cggcacgctc ggcaagctgg ccgaaatcga cgacatcgtg gcctatgcga
     3961 cgatcatctg ggtcgggggc atcatcctgg tctccttcgg ctggtcgcgc ggccggcttt
     4021 tctggcccgc cgtgctgcac ctggtcttca tgctgccgct gcccgcgacg ctgtattaca
     4081 aggtgtcgat cttcctgcag atggtgtcgt ccgaactggg cgtgtcgttc ctgaaaatgc
     4141 tgtcggtccc ggtcttcctg gaaggcaaca tcatcgatct gggggtcatg cgcctgcttg
     4201 tggccgaggc ctgttccggg ctgcgctacc tgttcccgat catgtccttt tcctacatct
     4261 tcgcggttct ctatcgcggg ccgcgctggc acaaggcggt gctgctgctg gccgcggtgc
     4321 cgatcaccgt ggtgatgaat tccgtgcgca tcgcgctggc cggcgtcatc gcgaacgaat
     4381 acggcgtcga gaccctggaa ggctttaccc atttcttcga gggctgggtg atcttcgtca
     4441 tctgcatcgt gatcctgttc ggcctggcga aactgatgct gctgttccat ccgggccgtc
     4501 ccagcctggc cgatgcgctg gatctggaaa ccaccggcat gttcgcccag cttggccgga
     4561 tccgcctgac gcaaccctcc gcggccatga tctcggccgc cgcgatcggg tttttggccc
     4621 tggcctcctg gcagctgatc cccgaggcgc ggggggtgca gaccgtccgc acgcccttcg
     4681 cgatgttccc ccagcaactg ggcgattggc gccagtcggg ccccgaagag cgcctgtcgg
     4741 ccgatatcgc caagacgctg gcggccgatg attaccgcca ggtcacgatg ctcagcggcg
     4801 ccgatgtccc gcccgtcggc ctgttcatgg ccttctacaa cgatcaatcc aagggcggcg
     4861 tccattcgcc cgagatctgc ctgcccagct cgggctggga aatcgccgaa ctgaaccgga
     4921 tcgacatcgc cccgcggctg ggggtgaacg aggccttccc gatcaatcgc gcggtcatcc
     4981 agaacggcaa ttcgcggatg atggtctatt actggttcca gcagggcgaa cggcgggtgg
     5041 cctgggatct ggcggcgaaa ttctatcttc tgatggacgg gatcggccgc ggacagacgg
     5101 atggcggcat cgtgcgcctg accacgccga tccggggcaa cgaatccgac gacgcggccg
     5161 aagcccggct gatggacatg acccggaacc tgcttgatcc gctgccgcgc ttcttcccgg
     5221 tcgactagga tgcatggggg cctgggatac gggcggggcg cgcggccctg cgccgccccc
     5281 ttcacagccc gtccaggatc cgcttttgca gggcgggata ccaatcgtcc aggcgcgcga
     5341 tcgggcattc ccagacccgc cgccagtgcc gccgcgcgat cagcacgccg cgcatctggg
     5401 gaaagttcca ccgcccgctc agcagatcct tgagactttc ccccagcagc ctgcgataca
     5461 gcatcacccg ataggcccgc cgccagtctt ccggccgttc ggcatggcgc cgcagataga
     5521 cgaccatgtt cagcaactgg aagacgatga ccttcttgcg ccggatccgg cccgaggccg
     5581 cctcgaaatg atgcagccgc gcggccggcg catgaaccag gtggccgtgc cgggcatagc
     5641 gatagctgac atcgacatcc tcgtaggccg cgtaatagcg cagggccgga tcgaaaggct
     5701 cggccagggc gatatcgcgg cgcacgctca tcgcgcagcc cggcatgaag gagaccgagc
     5761 ccgcgccacg cgccgccagg gcctcgggca gcggcgattg ccgcgggccg tcatagcgca
     5821 ggaaggtctc ttgcatgttc tgcatcagca ccttgcggtg aaaccagcgc cccgcccggc
     5881 tgccaagtac cagccgctgc aggacttgca gccggccgcg attgcccgat gccttgcgcc
     5941 gcagcggcgc ggcggccggc aggtcgccgg ttgcggcctc ggcctcgggc ggcggcgcgg
     6001 gcgcggtctc gaccagcgcg gtccggaccc cggcgaggcg gccatcggga tcggcctcgt
     6061 acagcgccag aacggcc
//
LOCUS       DTVW01000884            2098 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2086559, whole
            genome shotgun sequence.
ACCESSION   DTVW01000884 DTVW01000000
VERSION     DTVW01000884.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2098)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2098)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2098
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2086559"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            35..895
                     /locus_tag="EYO87_11555"
     CDS             35..895
                     /locus_tag="EYO87_11555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009817426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family transcriptional regulator"
                     /protein_id="HIC66612.1"
                     /translation="MGYRPNQAAQRLRSGRTGTIGLASSMPFAVAAGPSRLGFLMEIA
                     ASAAMTALTRDMALCLVPTSPGRNLDNLGFDGVIVVEPARDEPLIRYFEGRHTPIVSI
                     GKVPARPDIPAIDLHSAQTARLLLGHLFDAGSRRIGLITGRQRRTSYEETETVYAEFS
                     AAHAMPAIALSLDENGGEELAEREAAKLLQRHPQLDGLLVTVDALATGTMTALSHLGL
                     RVPDNVRLATRYDGMRAQLAQPQLTAVDLHLDLVARLAVETLLARIEGQDAAFTTPCP
                     DLIARPSSVG"
     gene            1149..1750
                     /locus_tag="EYO87_11560"
                     /pseudo
     CDS             1149..1750
                     /locus_tag="EYO87_11560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011750512.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT          383 a          712 c          637 g          366 t
ORIGIN      
        1 aacgcgcgaa cggatcgtcg cgctggccga caagatggga tatcgcccca atcaggctgc
       61 gcaacgtctg cgcagcgggc gcacgggaac gatcgggctg gcctcgtcga tgccgttcgc
      121 ggtagcggcc ggaccctcgc gactgggctt tctcatggaa atcgccgcgt cggcggcgat
      181 gacggcgctg acccgcgaca tggcattgtg cctggtcccg acatcaccgg gccgcaatct
      241 cgacaatctg ggtttcgacg gcgtgatcgt cgtcgaaccg gcccgcgacg aaccgttgat
      301 ccgctatttc gaagggcggc acacgcccat cgtgtcgatc ggcaaggtgc ccgcgcgccc
      361 cgacattccg gcgatcgacc tgcattcggc gcagaccgcg cgtcttctgc tggggcatct
      421 tttcgatgcc ggcagccggc gcatcggcct gatcaccggc cggcagagac gcacatccta
      481 cgaagagacc gagacggtct atgcagagtt ttctgccgcc catgccatgc cggcgattgc
      541 cctgagcctt gatgagaatg gcggcgagga actggccgaa cgcgaagccg ccaagctgtt
      601 gcaacggcat ccccagcttg acgggctgct ggtgacggtc gacgcgctcg ccaccggaac
      661 gatgacggca ttgtcgcacc tgggattgcg cgtgcccgac aatgtgcggc ttgccacacg
      721 atatgacggc atgcgggccc agcttgccca gccgcaactg accgcggtcg atctgcacct
      781 tgatctggtg gcccggcttg ccgtggagac gcttcttgca cgtatcgaag gacaggacgc
      841 cgccttcacc acgccctgcc ccgacctgat cgcccggcca tcgagcgtcg gttgacccga
      901 tggcgaccat gaccgccatc cggcttgcca gacctgccgg aattcccgcc agccggatcg
      961 ccctgcgcgg cgatcacgct catacgccgg acgggtcggg caacggcacc gatccggccc
     1021 cgacgccatt catgctatga accggacgcg gccgccttca gcgttcccgc acccgccgac
     1081 accgtggctc tgccctgagc ggtcggaaga tcctcccagc agaccgcgcg ggcgcattcc
     1141 cgcggggaat gccccgtcat cagactgatc gcgaccagaa agatcaggca gacggccatg
     1201 cccggaaata ccgggtcgat gcccgttccc agaaacggcc agatgatcgt gacggccatg
     1261 gcggaaagca tcgccacact gcagccggcc gcggtcgccc ggtgccagaa catgacggcc
     1321 agaaacggga tcaccagggt cgtggtcgag atccgcaggg cccactgata ggtgaacaac
     1381 tgggaccaga gccccttgtg gtgctggacc tggagcattc cagaaaatat cttctcgacc
     1441 ttttcgccag tcggggctga aacccaatgt cgcctactcc gcccgttcga ccgatatgat
     1501 gcgcgcgctg atcgtggccg gtatgggata tggcgtcttc aatatcaggc cgatgtccaa
     1561 acagacctgc gcgaccggtg atctggtgcg cctgccattg gcgggaagcc acgacgcgcc
     1621 aagtgcgggc gtgctggtcc ggcgggacgc ggcgctgacc acaatctgcc tggccatcat
     1681 cggcgcttgc gaattgaagg ccgcagaggg cgccttcgac gccgctgtca ttcagcctta
     1741 cacgccatag caagccagga ccgcgcatcg cggcccggca cgtatcgtgc gccgagatcg
     1801 cgcaaatccg gattggcgcc agatcgccgg cgcattctga caggaccgcc gctggaaccc
     1861 cgcctgaagc gcggatcgcc taggatgacc cacccggcct cggcattgtt cccggaattc
     1921 tgttccctct tgacatcggt ctcgcggaac actcttcctc atttatttct cgatatttcc
     1981 gctccttgtt cagtctttcc gccaggcata tctagccttc aacgcagaag gagaccttga
     2041 tgacaaaatc gttcatcgcc gcgccctata ccgctaccat cctgggcgaa ttcggggc
//
LOCUS       DTVW01000885            3167 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2086805, whole
            genome shotgun sequence.
ACCESSION   DTVW01000885 DTVW01000000
VERSION     DTVW01000885.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3167)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3167)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3167
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2086805"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..195)
                     /locus_tag="EYO87_11565"
     CDS             complement(<1..195)
                     /locus_tag="EYO87_11565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66613.1"
                     /translation="MINMGPDSFRAAQPATARSGRGLWRNGAKRAFETLLILLTAPVT
                     LPLMLLMAGLVALDGHNPFFA"
     gene            705..1547
                     /locus_tag="EYO87_11570"
     CDS             705..1547
                     /locus_tag="EYO87_11570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013959971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase"
                     /protein_id="HIC66614.1"
                     /translation="MLFWSDRHRKAFAVLEYGLMTRAPLTVVTGEVGAGKTTLIQALL
                     RQVDDDLRIGLISNARGDRGDLLRWVLNAFDIATPKDADYVDLFQSFQDFVLTQYAAG
                     KLVVLIFDEAQNLGPETLEELRMLTNINSGADELLQLILLGQPELRATIQRPELRQFA
                     QRVSATFHLGSFDPATARDYIRHRLVKAGGSGHEIDEAAAALIQREARGVPRMINKIA
                     DLALVYGAASGGTVVTADLVEEVLRDGLVLSAPDIPAETGTAPDRPARLVLAHEKDAR
                     RDLP"
     gene            1544..3058
                     /locus_tag="EYO87_11575"
     CDS             1544..3058
                     /locus_tag="EYO87_11575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66615.1"
                     /translation="MIDLQFYRSLLMRRLPVMLALLITCSAFGLVWAVKAPPIYSTAA
                     RLLVEEPQIAESDNSPSPSESLDVIEQQLMTRANLIDIANKLNVFRGDATLSVDEKVA
                     RMRAGTSIRRIAGRDQATMMTVGFTSTDPRIAAAVVNEFTTLVLSTNTRNRVGLAENR
                     LAFYQQEVQRLGDDLDQQNAKILEFKQKNADALPENLRYSQDRQSLLQERVSRLESDL
                     STLQAQKQDMVRLFEQTGSIRQNDTPQTPEQQQLSSLQAELNNTLGVYAEGSPKVQAL
                     RARIAAAQKAIEAASPADEAGQTGNSLLDINLAQLDTRIETIGKDLAQANRQLQDLSA
                     SISATATNSIALGALERDQANIQARYNAAVADLGAARTAERIESSARGQRITVIESAN
                     VPSRPSGPNRKKLALMGVGLGLGLAGGFFALMELLNRAIRRPAEMRARFQITPLAVIP
                     YIETRQERRHRQGVALVLILAVLIVIPLGLWGIHTQYMPLDILAQKVVNRLGLG"
BASE COUNT          571 a         1048 c         1050 g          498 t
ORIGIN      
        1 cgcgaaaaag ggattatgcc cgtccagcgc caccagcccc gccatcagca gcatcagcgg
       61 cagcgtgacc ggcgcggtca gcaggatcag cagcgtctcg aaagcccgct tggcgccgtt
      121 gcgccacagc ccgcgaccgg accgggccgt cgccggttgc gcggcgcgga agctgtccgg
      181 gcccatgttg atcatcaaat cctcccccgg ggagatcact caaaaccttg tcggctccgg
      241 cagccaacac ctcgcaggcc ggaagggtcc gacaggcgcg gacacggttg cgtcagcgcg
      301 atgccgcgac ccgcgattcc tatcacgcgg ggcggccgga atgaacagag agatttccaa
      361 tttagtcaaa actcaagaaa tgttgtgaca acaagagtgg gccgggacgg ccgttccggg
      421 ttatggctgg cgcgggatcc ggcccgccat cggaccggcc atcggatcgt ggcgcggggc
      481 ggggcggaac ccggagcgga aggaccgggc gccgacgcgg ccggggggca aaagcctcac
      541 ttttaggcag gtccggcgtt cggacccggt gtcacgctgg ccaaggtccg gggcaacgtc
      601 tatatggtac aaatgtctgt ggagcgtgta tcggtgtgag ccagttctat cttgatcatt
      661 acggcttttc ggtacgtccg ttctcgatcc tgcccgatcc ggacatgctg ttctggtccg
      721 acaggcatcg caaggcattc gcggtgctgg aatacgggct gatgacgcgc gcgccgctga
      781 ccgtggtcac gggcgaggtc ggcgccggca agaccaccct gatccaggcg ctgctgcggc
      841 aggtcgatga cgacctgcgc atcgggctga tctcgaatgc gcgcggcgat cgcggcgatc
      901 tcttgcgttg ggtgctgaac gccttcgaca tcgcgacccc gaaggatgcc gattacgtcg
      961 atctgttcca gagcttccag gatttcgtgc tgacccaata tgccgcggga aagctggtcg
     1021 tgctgatctt cgacgaggcc cagaacctgg gccccgagac gctggaagag ctgcggatgc
     1081 tgaccaacat caattccggc gccgacgagc tgctgcagct gatcctgctg ggccagccgg
     1141 aactgcgcgc gacgatccag cggcccgaat tgcggcaatt cgcccagcgg gtcagcgcga
     1201 ccttccatct gggcagtttc gatccggcca ccgcgcgcga ttatatccgg caccggctgg
     1261 tcaaggccgg cggttcgggc cacgagatcg acgaggcggc ggcggcgctg atccagcgcg
     1321 aggcgcgcgg cgtgccgcgg atgatcaaca agatcgccga tctggcgctg gtctatggcg
     1381 ccgcctcggg cgggacggtg gtgacggccg acctggtcga ggaagtgctg cgcgacggcc
     1441 tggtcctgtc ggcgcccgac atcccggccg aaaccgggac cgcgcccgac aggccggcgc
     1501 ggctggtcct ggcgcatgaa aaggatgcga ggcgcgacct gccatgatcg atctgcaatt
     1561 ctaccggtcg cttctgatgc ggcggctgcc ggtcatgctg gcgctgctga tcacctgttc
     1621 ggccttcggg ctggtctggg ccgtcaaggc gccgccgatc tattccaccg cggcccggct
     1681 gctggtcgag gaaccccaga tcgccgaaag cgacaattcg ccctcgccct cggaatcgct
     1741 cgacgtgatc gagcagcaat tgatgacgcg ggccaatctg atcgatatcg ccaacaagct
     1801 gaacgtgttc cgcggcgacg ccacgctcag cgtcgacgag aaggtcgcca ggatgcgcgc
     1861 cgggacctcg atccggcgca tcgcggggcg cgatcaggcg acgatgatga cggtgggctt
     1921 cacctcgacc gatccgcgca tcgcggcggc ggtggtcaac gaattcacca cgctggtttt
     1981 gtccaccaac acccgcaacc gggtcgggct ggccgagaac cggctggcat tctaccagca
     2041 ggaggtgcag cggcttggcg acgatctgga tcagcagaac gcgaagatcc tggaattcaa
     2101 gcagaagaac gccgatgccc tgcccgagaa cctgcgctac agccaggatc ggcaatcgct
     2161 gttgcaggaa cgggtatcgc ggctggaaag cgatctttcg accctgcagg cgcagaagca
     2221 ggacatggtg cggctgttcg aacagaccgg ctcgatccgc cagaacgata cgccccagac
     2281 gcccgaacag cagcaattgt ccagcctgca ggccgaactg aacaacacgc tgggcgtcta
     2341 tgccgagggc agccccaagg tgcaggcgct gcgcgcccgc atcgccgccg cccagaaggc
     2401 gatcgaggcc gccagccccg ccgacgaggc gggccagacc ggcaattcgc tgctggacat
     2461 caatctggcc cagcttgaca cccgcatcga aacgatcggc aaggatctgg cgcaggccaa
     2521 ccggcaattg caggacctct ccgcctcgat cagcgccacc gccaccaatt ccatcgctct
     2581 gggcgcgctg gaacgcgacc aggccaatat ccaggcgcgc tataacgcgg ccgtggccga
     2641 tctgggcgcg gcccgcaccg ccgagcggat cgaatcctcc gcccgcgggc agcgcatcac
     2701 ggtgatcgaa tcggccaatg tgcccagccg gccctcgggt ccgaaccgca agaagctggc
     2761 cttgatgggg gtcgggctgg gtctgggcct ggccggcggc ttcttcgcgc tgatggagct
     2821 tctgaaccgc gccatccgcc gcccggccga gatgcgcgcg cggttccaga tcacgccgct
     2881 ggcggtgatc ccctatatcg agacccgcca ggaacgccgc caccggcaag gcgtggccct
     2941 ggtgctgatc ctggcggtgc tgatcgtcat tccgctggga ttgtggggca tccataccca
     3001 atacatgccg ctggacatcc tggcccagaa ggtcgtcaat cgcctcgggc tgggctgagc
     3061 ccggccggtt tccaaggatt ttgcccgcat ggaaaagctg caagccgcca tcgagatcgc
     3121 ccgccgcaag cgcggcgccg ccgccgccgc cgcaaccccg cgtgcag
//
LOCUS       DTVW01000886            2708 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2088486, whole
            genome shotgun sequence.
ACCESSION   DTVW01000886 DTVW01000000
VERSION     DTVW01000886.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2708)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2708)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2708
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2088486"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..522)
                     /locus_tag="EYO87_11580"
     CDS             complement(<1..522)
                     /locus_tag="EYO87_11580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="glucans biosynthesis glucosyltransferase MdoH"
                     /protein_id="HIC66616.1"
                     /translation="MIAAPSSAEAGGPVPPESPIAMPVQDFRTLPATRRLRRTESARV
                     WLARLITFGGTAAIAVIGFMQMLEAFGDKPTPMQLALLALFVPTFAWVGFSFCGLLAG
                     LFAPRLTTPDGPNDARIVVVMPVYHENAAQSLGLLTALAKGLEQTGIANRAEVFVLSD
                     SRDPAVAVNESLIV"
     gene            complement(519..2081)
                     /locus_tag="EYO87_11585"
     CDS             complement(519..2081)
                     /locus_tag="EYO87_11585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018001230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucans biosynthesis protein"
                     /protein_id="HIC66617.1"
                     /translation="MKRRNFLNAATALAAGSVFAATPAQAQSSSDESTIDTPPEGART
                     DFGFEDVAAIAAKRAEAVHEQPVAKLVGSFADLNYDQYRGIRFRRDADPLSDQNQFGM
                     DLLPPGAIFYEPIGINIVRDGVPQKFEFDPRLLDFDPAQFPDGANLDDIGDMGWSGFR
                     LRTRLNRPDVMDEFAVFQGASYFRAVARGTLYGLSARGLAIKTGSPDGEEFPLFTDFW
                     IHRPSEGSEWVRIHALLDSKSVTGAYQFDINPGAVTMVRTRLALFPRVDLQNTGIAPL
                     TSMFWFSPASRRAVDDYRPAVHDSDGLQMHTGAGQALWRSLASHKNLQISSFVDKSPR
                     GFGLIQRNRDFGDYQDAEAMYNQRPSAWIQPESDWGEGEVRLIEIPVENEFNDNIVTY
                     WLPKDPLARGKRHDFRYRLSFAPLPPNDMPLAKVRQVRSGQSINNKDLRSFVVDFDLS
                     LFGGEMPESKVTTSAGTIVHAYLKTLADQGVLRLAFEFEPGDATVADLQALLTDKQGV
                     ALSESWLARWSA"
     gene            complement(2225..>2708)
                     /locus_tag="EYO87_11590"
     CDS             complement(2225..>2708)
                     /locus_tag="EYO87_11590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010395336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="peptidase"
                     /protein_id="HIC66618.1"
                     /translation="REQRVGRDLPTDIRVGAMLETPSLAFAPKKFFEMCDFVSIGGND
                     LKQFFYAADRENERVRRRYDTLNVPFLALLRQIVLRCEEARVPLSFCGEDAGRPIEAL
                     TFAALGIRRLSMRPASIGPVKHLIRRVSIADLRQVIDEAEASGMHNLRRPVTEWLARQ
                     "
BASE COUNT          496 a          851 c          894 g          467 t
ORIGIN      
        1 gacgatcagg ctttcgttga ccgcaacggc aggatcgcgg ctgtcggaca gaacgaagac
       61 ttcggctcgg ttcgcgatgc cggtctgctc cagccccttg gccagggctg tcagcaggcc
      121 caggctttgg gcggcattct cgtgatagac gggcatcacc acgacgatgc gggcatcatt
      181 ggggccgtct ggcgtcgtca gccggggcgc gaacagcccc gccagcagac cgcagaagga
      241 aaatccgacc caggcgaagg tgggcacgaa caatgccaaa agcgcaagct gcatcggcgt
      301 cggcttgtcg ccgaaggcct ccagcatctg catgaagccg atgacggcga tcgcggcggt
      361 tccgccgaag gtgatcagcc gggccagcca gacccgcgcg gattcggttc ggcgcagccg
      421 ccgagttgcg ggcagggtcc gaaagtcctg caccggcatg gcgatcggcg attcgggtgg
      481 aaccgggccg ccagcctcgg cagaggacgg cgccgcaatc atgccgacca gcgcgccagc
      541 caggattcgc tgagggcgac cccctgcttg tcggtcagaa gcgcctgcag gtcggccacg
      601 gtggcgtcgc ccggctcgaa ttcgaaggcc agccgcagga cgccctgatc ggcaagcgtc
      661 ttcaggtagg catggacgat cgtcccggcc gatgtcgtga ccttcgattc cggcatctcg
      721 ccgccgaaca gggacaggtc gaaatcgacc acgaagctgc gcagatcctt gttgttgatg
      781 gattgtccgg aacggacctg gcgcaccttg gccagcggca tgtcgttcgg cggcagcggc
      841 gcgaagctga gacgatagcg gaaatcgtgc cgcttgccgc gcgccagcgg atccttgggc
      901 agccagtagg tgacgatatt gtcgttgaac tcgttttcga ccgggatttc gatcaggcgg
      961 acctcgccct cgccccagtc gctttcgggc tggatccagg ccgaggggcg ctggttatac
     1021 atcgcctcgg cgtcctgata atcgccgaag tcgcggttgc gctggatcag gccgaagccg
     1081 cgcggagact tgtccacgaa ggacgaaatc tgcaggttct tgtgcgaggc aaggctgcgc
     1141 cacaatgcct ggccggcgcc ggtatgcatc tgcaagccgt cgctgtcatg cacggcgggg
     1201 cggtaatcgt ccaccgcgcg ccggctggcc gggctgaacc agaacatcga agtcaacggc
     1261 gcgatgccgg tattttgcag atcgacgcgc ggaaacagcg caagccgcgt ccgaaccatc
     1321 gtcaccgcgc cgggattgat gtcgaactga taggcgcccg tcaccgactt gctgtccaga
     1381 agcgcgtgaa tgcgcaccca ttcggatccc tccgaggggc ggtggatcca gaaatcggtg
     1441 aacagcggaa attcttcgcc atccgggctg ccggtcttga tcgccagacc ccgcgccgac
     1501 aggccataga gggtgccgcg cgcgacggcg cgaaaatagc ttgcgccctg gaaaaccgcg
     1561 aattcgtcca tcacgtcggg ccggttcagc cgcgtgcgaa gccggaaacc cgaccatccc
     1621 atgtcgccga tatcgtccag gttcgcgccg tcgggaaact gggccggatc gaaatccagc
     1681 aggcgcggat cgaattcgaa cttctgcgga actccgtcgc gcacgatgtt gatgccgatc
     1741 ggctcataaa agatcgcgcc tggcggcagc aggtccatgc cgaactggtt ctgatcgctc
     1801 agcggatcgg cgtcgcgccg gaaccttata ccgcgatact ggtcataatt caggtccgcg
     1861 aagctgccca ccagtttcgc caccggctgc tcatgaacgg cttcggcccg tttggcggcg
     1921 atcgcggcca cgtcttcgaa accgaaatcc gtccttgcgc cttcgggcgg cgtgtcgatc
     1981 gtcgattcgt cagaactcga ttgtgcctgg gccggcgtcg cggcaaagac gctgccggct
     2041 gccagcgccg tggcggcatt gaggaaattt cgtcgcttca tctttggagg cagttcgcaa
     2101 gagccggttc agtataggga ttgcgccgca gcgcaacaag tcgcgtcggt caccggaaaa
     2161 gcgaccctga gttgtgtgtg gcgtcgcccg atcgcgccca ggggtgattc gggcgatttt
     2221 ccgcctattg tcgggccagc cattcggtca ccggccggcg caggttgtgc attcccgatg
     2281 cctcggcctc gtcgatgacc tgccgaagat cggcgatcga gacgcgacgg atcagatgct
     2341 tgaccgggcc gatcgaggcc ggacgcatcg acaggcgtcg gatgcccagg gccgcaaagg
     2401 tcaatgcctc gatcgggcgg ccggcatcct cgccgcagaa ggacagcggc acacgcgcct
     2461 cttcgcagcg cagcacgatc tggcgcagca atgcgagaaa gggcacgttc agcgtgtcat
     2521 atcggcgtcg gacgcgttcg ttttcgcggt cggccgcgta gaagaactgc ttcaggtcgt
     2581 tgccgccgat cgagacgaag tcgcacatct cgaagaactt tttcggagcg aaggccagcg
     2641 agggcgtctc gagcatcgcg cccacgcgaa tgtcggtcgg caggtcacgg cccacccgct
     2701 gttctcgc
//
LOCUS       DTVW01000887            1757 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2091035, whole
            genome shotgun sequence.
ACCESSION   DTVW01000887 DTVW01000000
VERSION     DTVW01000887.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1757)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1757)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1757
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2091035"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            35..772
                     /locus_tag="EYO87_11595"
     CDS             35..772
                     /locus_tag="EYO87_11595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020285544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IclR family transcriptional regulator"
                     /protein_id="HIC66619.1"
                     /translation="MDRSLQILDILTERHQPMSAYDLARATGAPPSTVYKLIDELTER
                     NMLSRSADGRAWLGPRLMRYGLAYRARVNAFNEAERAMFALNERVAEMVQICARDEGM
                     MQVVAMAEGSGPFRVTSDVGTRVPLNWTASGRLLIGHLPDAERLAVFAGCARPSNTGL
                     AETDPAILADLSRRDFLDGLSVQIDTSEDQVACIAAPVRGQDGTCQLTLSVVMPKHRV
                     PDKFDLVAEAVREAARSVEKALGLHHR"
     gene            complement(763..1254)
                     /locus_tag="EYO87_11600"
     CDS             complement(763..1254)
                     /locus_tag="EYO87_11600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007739888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HIC66620.1"
                     /translation="MDITSLPTTPETRLVRIGITLPDAAPKPIGSFRNVRVSGGMIYV
                     SGQGPVRADGSLIRGKVGAEISAEEARDHARLVAINILSALRDALGSLDRVGGVVKLL
                     GMVNADSDFERHPFVIDGASDLLAEVFGETGIHARSAFGVGSLPNRIPVEIEAIFEVA
                     DQR"
     gene            complement(1223..>1757)
                     /locus_tag="EYO87_11605"
     CDS             complement(1223..>1757)
                     /locus_tag="EYO87_11605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018066190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIC66621.1"
                     /translation="GGQRQRIGIARALALEPEFIVADESVSALDVSIQAQVLNLLLDL
                     RQKRNLTMLFIAHDLSVVNYLCDQVAVLYLGRLMEIGPAAAIHKASAHPYTRALNSAI
                     PLPDPRAARGRTPLQGDIPSPLNPPSGCVFRTRCPHAAEICAQGAPTAHPVTPDHQSH
                     CKRAEDLYGHHVAANHA"
BASE COUNT          294 a          586 c          605 g          272 t
ORIGIN      
        1 cagccggcgg acgcggcgca gccggaccag cggcatcgac cgttcgcttc agatcctcga
       61 tatcctgacc gagcggcacc agccgatgag cgcctatgac ctggccaggg cgacgggcgc
      121 gccgccctcg accgtctaca agctgatcga cgagttgacc gaacggaaca tgctgtcgcg
      181 cagcgccgat ggccgcgcct ggctggggcc gcgcctgatg cggtacggcc tggcctaccg
      241 cgcccgcgtc aacgccttca acgaggccga gcgcgccatg ttcgcgctga acgaacgggt
      301 ggccgaaatg gtccagatct gcgcccgcga cgaggggatg atgcaggtcg tggccatggc
      361 cgagggttcg gggccgttcc gcgtcacctc ggatgtgggc acgcgggtgc cgctgaactg
      421 gaccgcctcg gggcggctgc tgatcggcca tctgcccgat gccgaacggc tggcggtctt
      481 tgccggatgt gcgcgtcctt ccaataccgg gctggccgag accgatccgg cgatcctggc
      541 cgacctgtcc cggcgcgatt tcctggacgg gctgtcggtg cagatcgaca cctccgaaga
      601 tcaggtggcc tgcatcgccg cgcccgtgcg cggacaggac ggcacctgcc agctgaccct
      661 gtcggtggtc atgcccaagc accgcgttcc cgacaagttc gaccttgtgg ccgaggccgt
      721 gcgcgaggcg gcgcgatcgg tggaaaaggc gcttgggctg catcaccgct gatccgcgac
      781 ctcgaagatc gcctcgatct cgaccgggat gcggttgggc agcgatccta cgccaaaggc
      841 cgaccgggca tggatgccgg tttcgccgaa cacctcggcc agcaggtcgg aggcgccgtc
      901 gatgacgaag ggatggcgtt cgaaatcgga atcggcattg accatgccca acagcttgac
      961 cacgccgccc acccggtcca gcgaaccaag cgcatcgcgc agcgccgaca ggatgttgat
     1021 cgcgaccagc cgggcatgat cacgagcctc ctcggcgctg atctcggctc cgaccttgcc
     1081 gcggatcagg ctgccatcgg cacggaccgg cccctggccc gagacataga tcatcccccc
     1141 cgaaacccgg acattgcgga atgatccgat gggtttcggc gcggcgtcgg gcagggtgat
     1201 cccgatccgg accagccgcg tctcaggcgt ggttggcagc gacgtgatgt ccataaagat
     1261 cctcggctct cttgcaatgg ctctggtgat cgggcgtgac cggatgcgcc gtgggcgcgc
     1321 cctgggcgca gatttcggcg gcatgggggc accgggtgcg gaagacgcag cccgatggcg
     1381 ggttcagcgg gctgggaata tcgccctgaa gcggcgtccg gccccgtgcc gcgcgcggat
     1441 cgggcagcgg aatggccgaa ttcagcgcac gggtataggg atgggccgac gccttgtgga
     1501 tcgcggcggc ggggccgatc tccatcagcc ggcccagata cagcaccgcg acctgatcgc
     1561 agagataatt caccaccgac aggtcatggg cgatgaaaag catcgtcagg ttgcgcttct
     1621 gccgcagatc cagcaacagg ttcagcacct gcgcctggat cgacacgtcc agcgccgaga
     1681 cgctttcatc ggcgacgatg aattccggct ccagcgccag ggcgcgggcg atgccgatcc
     1741 gctgccgctg gccgccg
//
LOCUS       DTVW01000888            1513 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2093643, whole
            genome shotgun sequence.
ACCESSION   DTVW01000888 DTVW01000000
VERSION     DTVW01000888.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1513)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1513)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1513
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2093643"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1075)
                     /locus_tag="EYO87_11610"
     CDS             complement(<1..1075)
                     /locus_tag="EYO87_11610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005852296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter"
                     /protein_id="HIC66622.1"
                     /translation="MADDDKSPETDHEIAADAADRDDEDFQLRDDLLDRIHAAIEDED
                     SARLNDLLEPMHAADIADVIEQLSSAERRAFLHLYSGEIDGEILSEIDEGIREEVLEQ
                     LPRAVLVEAVREMDSDDVVDLIEDLDESGRAEILAALDDSDRAAVQQSLGYPEYSAGR
                     LMQSETVTAPEHWTVGEAIDFLRSEEWLPEQFYHVILVDPRRHPTGYVALGRLLASPR
                     ATALSDITEDSFRTVSAYAEEGDVAYAFNQYHLISAPVVDRDERLVGVITMDDAMNVM
                     DEEHEEDILRLAGVGEDSAITDTVVETLRQRLPWLLVNLFTAIVASLVIAIFEATIQQ
                     IVALAVLMPIVASMGGNAGTQTLT"
     gene            complement(1125..>1513)
                     /locus_tag="EYO87_11615"
     CDS             complement(1125..>1513)
                     /locus_tag="EYO87_11615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005795623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="histidinol-phosphatase"
                     /protein_id="HIC66623.1"
                     /translation="IARLTHRGGTSPLRARTRVALNHALLMTTFPEIGTGAEAAAFRR
                     VSQQARLTRYGLDCYAYALLAMGQIDLVIEAGLQAYDIAGPLAVVQAAGGIVTDWQGG
                     SAAGGGQVVAAGSPELHREALDLLNR"
BASE COUNT          248 a          501 c          503 g          261 t
ORIGIN      
        1 cggtcagggt ctgggtgccg gcattcccgc ccatcgaggc gacaatcggc atcagcaccg
       61 ccagcgcgac aatctgctgg atcgtcgcct cgaagatcgc gatgaccagc gaggcgacga
      121 tggcggtgaa aagattgacc agcaaccagg gcagccgctg gcgcagggtc tcgaccacgg
      181 tatcggtgat cgccgaatcc tcgcccacgc cggcaaggcg caggatgtct tcctcgtgtt
      241 cctcatccat gacgttcatc gcgtcatcca tggtgatcac gccgaccagc ctttcgtccc
      301 gatccacgac cggggccgag atcaggtgat actggttgaa ggcataggcc acgtcgcctt
      361 cctcggcata ggcgctgacg gtacggaaac tgtcctcggt gatgtcgctc agggcggtgg
      421 cacggggcga ggccagaagg cggccaagcg cgacatatcc tgtcggatgg cggcgcggat
      481 cgacaagaat cacgtggtag aactgttccg gcagccactc ctcgcttcgc agaaagtcga
      541 tcgcctcgcc gacggtccag tgctcggggg cggtcacggt ctcggactgc atcagtcggc
      601 cggcggaata ttcgggatag cccagcgatt gctggaccgc cgcccggtcg ctgtcatcca
      661 gcgcggcgag aatttcggcc cggccggatt cgtccagatc ctcgatcagg tcgacgacat
      721 cgtcgctgtc catctcgcgg acagcctcga ccagcaccgc gcggggcaac tgttccagca
      781 cctcttcgcg gatgccctcg tcgatttcgg acaggatctc gccgtcgatc tcgccggaat
      841 agagatgcag aaaggcgcga cgctcggcgc tggaaagctg ctcgatcacg tcggcgatgt
      901 cggcggcgtg catcggctcc agcaggtcgt tcagacgcgc cgaatcctcg tcctcgatgg
      961 cggcgtggat gcgatccagc aggtcgtcgc gcagctggaa atcctcgtcg tcgcgatcag
     1021 cggcgtcggc ggcgatctcg tggtccgttt ccgggctctt gtcgtcgtcg gccatgcctc
     1081 gtctcctgcc gttcgaggtt ccgtgactga ttaggtcggg cgcgctagcg gttcaacagg
     1141 tcaagcgcct cgcggtgcaa ttccgggctg ccggcggcga ccacctgccc gcccccggcg
     1201 gcagagccgc cctgccagtc ggtcacgatc ccgcccgccg cctggaccac cgccagcggt
     1261 ccggcgatgt cataggcttg caggcccgcc tcgatcacca ggtcgatctg ccccatcgcc
     1321 agaagcgcgt aggcatagca gtccagacca tagcgcgtca gccgcgcctg ttgcgagacg
     1381 cggcggaaag cggcggcctc ggccccggtg ccgatttcgg ggaaggtggt catcagcagg
     1441 gcgtggttca gcgcgacccg tgtgcgggcg cgcagcggcg aggtgccgcc gcgatgggtc
     1501 agacgggcga tcc
//
LOCUS       DTVW01000889            1902 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2095862, whole
            genome shotgun sequence.
ACCESSION   DTVW01000889 DTVW01000000
VERSION     DTVW01000889.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1902)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1902)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1902
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2095862"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..546
                     /locus_tag="EYO87_11620"
     CDS             <1..546
                     /locus_tag="EYO87_11620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate/isopropylmalate dehydrogenase family
                     protein"
                     /protein_id="HIC66624.1"
                     /translation="RHVTAVHKANVMRVSDGLFLECCRSVAADYPDTRYDEGLVDAMC
                     AHLVRSPDLYDVIVTTNMFGDILSDLAAELAGGLGLAASLNAGERMAMAQAQHGSAPD
                     LAGRDIANPASLIGSAGMLLVWLGARRGDDAMQAAGAAIEAALEECLTSPGHRTRDLG
                     GRAGTRDLAHAVGARLTDKTV"
     gene            664..1251
                     /locus_tag="EYO87_11625"
     CDS             664..1251
                     /locus_tag="EYO87_11625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009159687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein carrier protein LolA"
                     /protein_id="HIC66625.1"
                     /translation="MNRRIFAFAPAAALLVLGLGLGSPALAEKIPLNEISRYLNGLTT
                     ATSDFTQVNPDGTMSTGTVYIRRPGRVRFEYNNDKTLVVASGGNVTVVDPKSNGGPQQ
                     YPLSRTPLSIILARNVDLGRANMVTGYVEAKNSTVVTAQDPANPQYGNIQLVFTSPTE
                     LRQWIVTDDSGQKTTVILGEMRKGVSIPDSKFVMR"
     gene            1355..>1902
                     /locus_tag="EYO87_11630"
     CDS             1355..>1902
                     /locus_tag="EYO87_11630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008887097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HIC66626.1"
                     /translation="MSMSARLFTPILVGGSLILLINFALRASFGVFQIPIGAEFGWPR
                     AEFSLAIAIQNLAWGIGQPIFGAMAERWGDRPAVILGALLYSTGLILSAYATTPATMQ
                     LLEILVGFGIAGTGFGVILAVVGRAASDANRSLALGIATAAGSAGQVFGAPLAEMLLG
                     RYPWQSVFMIFGVIVLTTLLFLP"
BASE COUNT          323 a          605 c          627 g          347 t
ORIGIN      
        1 cgacatgtga ccgcggttca caaggcgaat gtgatgcgtg tcagcgacgg tctgtttctg
       61 gaatgctgcc ggtcggtggc cgcggattat cccgacacgc gctatgatga aggccttgtc
      121 gatgcgatgt gcgcccatct ggtgcgatcg cccgatctct acgacgtgat cgtgaccacc
      181 aacatgttcg gagacatcct gtcggatctg gccgcggaac tggcaggcgg gctgggcctt
      241 gcggcgtcgc tgaacgccgg agaaagaatg gcgatggcgc aggcgcagca cggctcggcg
      301 cccgatctgg caggccggga catcgccaat cccgcctcgc tgatcggatc ggcggggatg
      361 ctgcttgtct ggctgggcgc gcggcgcggg gatgatgcga tgcaggcggc cggggcggcg
      421 atcgaagcgg cactggaaga atgcctgacc tcgcccggtc acaggacccg cgatctgggc
      481 ggccgggccg gcacgcgcga cctggcccac gcggtcggcg caaggctgac ggacaagacg
      541 gtctgacatc gttcagcgcg gcggccgtac cggggaaccg tcacatcggc gcgagcgttc
      601 gcggcagatg ccatccgcca gacgtgatgt gcagatgcca cggaaaagga tagaattggc
      661 gacatgaaca gacgcatctt cgccttcgcg cccgccgccg ccctcctcgt tcttggtctt
      721 ggccttggca gcccggcctt ggccgaaaag attccgctga acgagatctc tcgctatctc
      781 aacggcctca cgaccgcgac ctcggacttt acgcaggtca atccggacgg cacgatgtca
      841 accggaaccg tgtatatccg ccgtccgggc agggtccggt tcgaatacaa caacgacaag
      901 acactggtcg tggcctcggg cggcaacgtg accgtcgtcg atccgaaatc gaacggcggt
      961 ccgcagcaat atccgctgtc cagaaccccg ctgtcgatca tcctggcccg gaacgtcgat
     1021 ctgggccggg ccaacatggt caccggctac gtcgaggcga agaattcgac cgtggtgacg
     1081 gcccaggatc ccgccaatcc gcaatacggc aatatccagt tggtcttcac cagtccgacc
     1141 gaactgcggc aatggatcgt gaccgacgac agcggccaga agacgacggt gatcctgggc
     1201 gagatgcgca agggcgtctc gatcccggat tcgaaattcg tgatgcgctg agccgcgcgt
     1261 ccgggaccga tcgctgtcat ccagacagcg atcttgacct tttcggcgaa aggccgcaac
     1321 gctgcggcga gaacttgccg caggggttat cgccatgtcg atgtcggccc gccttttcac
     1381 cccgatcctg gtcggcggct cgctgatcct gctgatcaat tttgcgctgc gggccagttt
     1441 cggcgtcttc cagataccga tcggcgcgga attcggctgg ccgcgcgccg agttcagcct
     1501 tgccatcgcg atccagaacc tggcctgggg gatcggccag ccgatcttcg gcgccatggc
     1561 cgaacgctgg ggcgaccggc cggcggtcat ccttggcgcg ctgctgtatt ccacggggct
     1621 gatcctcagc gcctacgcga ccacgcccgc gacgatgcag ctgctggaga tactggtcgg
     1681 cttcggcatc gcgggaacgg gtttcggtgt catccttgcg gtggtcggcc gcgccgccag
     1741 cgacgccaac cgcagtctcg cgcttggcat cgccacggct gcgggttcgg ccgggcaggt
     1801 cttcggggca cctttggccg agatgcttct gggccgttat ccgtggcaat ccgtgttcat
     1861 gatattcggc gtgatcgtgc tgacgacgct gctgttcctg cc
//
LOCUS       DTVW01000890            1720 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2095940, whole
            genome shotgun sequence.
ACCESSION   DTVW01000890 DTVW01000000
VERSION     DTVW01000890.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1720)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1720)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1720
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2095940"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            10..939
                     /locus_tag="EYO87_11635"
     CDS             10..939
                     /locus_tag="EYO87_11635"
                     /inference="COORDINATES: protein motif:HMM:PF03176.13"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66627.1"
                     /translation="MAFILTPVLTAPPAGTGPPPLAVLQEFHQSLAAMRARIQDRALR
                     QSTQRLALALGGLRGSIDAAGLEQRLTAGLATLLADLRQLLAAQPVGLDDIPGHLRRA
                     WIAHDGRVRVQAWPAKAIAGNDDLRRFAAAVLAAEPSAVGTPVTITQASGAVVAAFRQ
                     ATATAFVLVTIVLLVLLRRLGDTALVLAPLVLAAMLTGATSVVLDLPFNFANVIVLPL
                     LFGLGVASGVHLVMRRRRTGDAVELLRTSTPRAVLYSALTTIASFGSLALSGHRGMTS
                     MGQLLTIAIAYSLICTLIVLPALMVWLERRKRP"
     gene            1018..>1720
                     /locus_tag="EYO87_11640"
     CDS             1018..>1720
                     /locus_tag="EYO87_11640"
                     /inference="COORDINATES: protein motif:HMM:PF12804.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphocholine cytidylyltransferase family
                     protein"
                     /protein_id="HIC66628.1"
                     /translation="MPEPIAIAAYRRPAIKAVMLAAGIGARLKKAAGFPPKILLRFGG
                     KTLLQRHVEILRHLGIGELVLGVGYQAHNIRREIADLGAGDFVRTVDCPEHAKGAPYT
                     MWGLRAEFNGPVLFMDGDVLYDHRLMAALLDCGHQTCFAMDRKVRPGDDPVKICFRDG
                     RIVDFHKQPTALHDDFAEWVGFLRLSAEVTSQIEAALRPYIEAGRTDIIYEQVFRDIL
                     HGSAHGTFDTADITGL"
BASE COUNT          273 a          565 c          551 g          331 t
ORIGIN      
        1 atcgaagata tggcgtttat cctgacgccc gtcctgaccg cgccaccggc cggcaccggg
       61 ccgccgccgc tggcggtgct gcaagaattc caccaatccc tcgccgccat gcgggcccga
      121 atccaggatc gcgcgttgcg ccaatcgacc cagcgtcttg cccttgcgct gggcgggctg
      181 cgcggttcca tcgatgccgc gggtctggaa cagcgcctga ccgcgggctt ggcgacattg
      241 ctcgccgatc tgcgccagtt gctggccgcc cagccggtcg gtctcgacga tatccccggc
      301 cacctgcgcc gggcgtggat cgcccatgac ggccgcgtgc gcgtccaggc ctggccggcc
      361 aaggcaatcg ccggcaatga cgatttgcgc cgtttcgcgg ccgccgtcct ggccgccgaa
      421 cccagcgccg tcggcacgcc ggtgacgatc acgcaagcca gcggcgcggt cgtggcggcg
      481 ttccgccagg cgacggcgac cgcgttcgtg ctggtgacca tcgtcttgct ggtcttgctg
      541 cgccggcttg gcgatacagc actggttctg gcccccctgg tgctggcggc gatgctgacg
      601 ggggcgacct cggttgtcct cgatcttccg ttcaatttcg ccaatgtcat cgtactgccg
      661 ctgctgttcg ggctcggcgt tgccagcggc gtccatctgg taatgcgccg ccggcgcacc
      721 ggcgacgcgg tcgaattgct gcgcaccagc acgccgcgcg cggtcctcta tagcgcgctg
      781 acgaccatcg cctcgttcgg cagtctggcg ctatcggggc atcggggcat gaccagcatg
      841 ggccagcttc tgaccattgc gatcgcctac agcttgatct gcaccctgat cgtcctgccg
      901 gcgctgatgg tctggctgga acggcgcaag cggccatgac gccgttggaa gtggacgcgc
      961 tggactatcc ttcgtagaaa tacgccgagc gccatcaaac aatcgaatgt cccaatcatg
     1021 cccgaaccga ttgccattgc cgcctatcgc cggcccgcga taaaagcggt catgctggcg
     1081 gcgggcatcg gcgcgcggct gaaaaaagcc gccggttttc caccaaaaat actgctgcgg
     1141 tttggcggca agacattgct gcaacgccat gtggaaatat tgcggcattt gggtatcggc
     1201 gaactggttc tgggcgtcgg atatcaggcc cataatatcc ggcgggaaat cgccgatctg
     1261 ggggccggcg atttcgtgcg caccgtcgat tgcccggaac acgccaaggg tgcgccctat
     1321 acaatgtggg ggttgcgcgc cgaattcaac gggccggtcc tgttcatgga cggcgatgtt
     1381 ctgtacgatc accggctgat ggcggcgctg ctggattgcg ggcaccagac ctgtttcgcc
     1441 atggaccgga aggttcgccc tggcgacgac ccggtgaaga tttgctttcg cgacggccgg
     1501 atcgtcgatt tccacaagca gccgaccgcg ctccatgacg atttcgccga atgggttggt
     1561 ttcctgcgcc tgtccgccga ggtaaccagc cagatcgagg cggcattacg gccctatatc
     1621 gaggccgggc ggaccgatat tatctacgaa caggtcttcc gcgatattct gcatggttcg
     1681 gcccatggca cgttcgacac ggcggacatc accggcctgc
//
LOCUS       DTVW01000891            2577 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2097283, whole
            genome shotgun sequence.
ACCESSION   DTVW01000891 DTVW01000000
VERSION     DTVW01000891.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2577)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2577)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2577
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2097283"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(3..698)
                     /locus_tag="EYO87_11645"
     CDS             complement(3..698)
                     /locus_tag="EYO87_11645"
                     /inference="COORDINATES: protein motif:HMM:PF02515.15"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HIC66629.1"
                     /translation="MRVGVSIVDIATGLFLLSGILSALWRRERTGEGSRVDASMLAAT
                     VNIMENPISRHSFTGQVPGPEGLSHPVVSPFSGYKTSDGLIFVAISNTNRYRVFAEAL
                     GRADLATDPRFAENANRVENDGALRKILEDVLKERTTAEWEEVLIPQGVTVSAINDVA
                     QLKERFPEAFVEVDHPTAGPALLPGSPVSFGEGALSFSRPAPTVGQHTEEILQEFGYD
                     WGQIAEFRDKGVI"
     gene            679..1074
                     /locus_tag="EYO87_11650"
     CDS             679..1074
                     /locus_tag="EYO87_11650"
                     /inference="COORDINATES: protein motif:HMM:TIGR01352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB family protein"
                     /protein_id="HIC66630.1"
                     /translation="MDTPTRTGGPPAGPAKAGQGGQMQASPEATGGGGGISPQQLARI
                     EASWRQQIGACMARSVSRVSGGRGARMAVNFVVGRNGRVQGASLNGSSGDARVDQQVL
                     RAVRRARCPAAPPSLAQRQLSFQQPFAIR"
     gene            complement(1151..2575)
                     /locus_tag="EYO87_11655"
     CDS             complement(1151..2575)
                     /locus_tag="EYO87_11655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011747194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HIC66631.1"
                     /translation="MADASGADAQVVTKKYDDGGVYEGTFRNGRQHGQGTYTLPNGYV
                     YEGDWVEGEIRGQGKATFPNGSVYVGQFVKGKPEGRGKITYPDGGTYEGDWIAGEITG
                     EGVARYANGSVYTGQFVKGLHQGKGTLTQPNGYKYEGQWNAGVKEGQGRITYPDGAVY
                     EGGMLAGQRAGKGKLTMADGMVYDGIWAAGQMSGTGVLVQASGDRYEGQMQRGQREGQ
                     GVATYANGDVYDGSFKADRRHGKGTFTGTDGYVYSGDWVEGRMEGQGQITYPDGSVYV
                     GQMKNDRPDGSGKITYPDGSTYEGQWAEGVIEGEGKARYANGMVYEGNFRNARNDGQG
                     RMSYPDGYVYNGAWKDGQRHGEGQATYADGTVYTGAFVAGLREGQGKLTTPDGFVYEG
                     GWKAGEIDGQGVATYANGDRYEGHFAAGKRQGQGVMRYASGQVAAGEWEDNRLIDAQP
                     APAKGEAGGGGAASGDAEAPAPEG"
BASE COUNT          391 a          910 c          823 g          453 t
ORIGIN      
        1 cgttaaatca cccctttgtc ccggaactcc gcgatctgcc cccagtcgta accgaactcc
       61 tggaggattt cttcggtgtg ttggcccacc gtgggagcgg gccgggagaa ggatagcgcg
      121 ccctcgccga aggatacggg agagcccggc agcagggccg gtccggccgt ggggtgatcg
      181 acctcgacga aggcttcggg aaaccgctct ttcaattggg cgacatcgtt gatggcgctg
      241 acggtgaccc cctgggggat gagaacctcc tcccattcgg cggtggtccg ctctttcaaa
      301 acatcctcaa gaatcttccg aagcgcaccg tcgttttcaa cgcggttcgc attttccgcg
      361 aaacggggat cggtggccag gtccgcgcgg cccagcgcct cggcaaacac ccggtagcga
      421 ttcgtgttcg agatcgcgac gaagatgagc ccgtcgctcg tcttgtagcc cgaaaagggg
      481 gagacgaccg gatgggacaa tccctccggg cccggaacct gtccggtgaa gctgtgccga
      541 gagatgggat tttccatgat gttaacggtg gcggccagca tggaggcgtc cacacggctg
      601 ccctcgcccg tgcgctcgcg gcgccagagg gctgagagaa tacccgagag gagaaaaagc
      661 ccggtcgcga tatccacgat ggacaccccc acccgcacgg gcggcccgcc ggccgggccg
      721 gcaaaggcgg gtcagggcgg gcagatgcag gccagccctg aggctaccgg cggcggcggc
      781 ggtatcagcc cgcagcaact ggcccggatc gaggcaagct ggcggcagca gatcggcgcc
      841 tgcatggcgc gcagcgtctc tcgcgtgtcg ggcgggcgcg gggcacgaat ggcggtgaat
      901 ttcgtcgtcg gccggaacgg gcgcgtgcaa ggcgcgtcgc tcaacggctc ctcgggcgac
      961 gcgcgagtcg atcagcaggt tctgcgcgcg gtccgcaggg cgcgctgccc cgccgccccg
     1021 cccagcctgg cgcagcggca attgtcgttc cagcagccct tcgcgattcg ctgatcgcga
     1081 tccggcgaag cggcagggcc gacaggcgcc cggcccgcgc ggcggacaaa cgtcggtgga
     1141 gggggaccat tcatccttcg ggcgcgggcg cttcggcatc gccggaggca gcgccgccgc
     1201 cgcccgcctc gcccttggcc ggggcgggct gggcgtcgat caggcggttg tcctcccatt
     1261 cgccggcggc aacctgcccg ctggcatagc gcatcacgcc ctggccctgc cgcttgccgg
     1321 ccgcgaaatg gccctcgtag cgatcgccat tggcataggt cgcaacgccc tgaccgtcga
     1381 tctcgcccgc cttccagccg ccttcataga cgaagccgtc cggcgtggtc agcttgccct
     1441 gaccctcgcg cagaccagcc acgaaggcac cggtatagac cgttccatcg gcataggtcg
     1501 cctgaccctc gccatggcgc tggccgtcct tccaggcgcc gttatagaca tagccgtcgg
     1561 gataggacat gcgcccctgc ccgtcattgc gcgcgttcct gaaattgcct tcatagacca
     1621 tgccgttggc atagcgggcc ttgccctcgc cctcgatcac cccctcggcc cactgccctt
     1681 cataggtcga gccgtcggga taggtgatct tgccggaccc gtccggccgg tcgttcttca
     1741 tctggccgac atagaccgaa ccgtcgggat aggtgatctg gccctgcccc tccatccggc
     1801 cctcgaccca gtcgccgctg tagacatagc catcggtgcc ggtgaaggtg cccttgccgt
     1861 gacggcggtc ggccttgaag ctgccgtcat agacatcgcc attggcatag gtcgcaacgc
     1921 cctggccctc gcgctggccg cgctgcatct gcccctcgta tcggtcgccc gaggcctgga
     1981 ccagcacccc cgttcccgac atttgcccgg ccgcccagat gccgtcatag accatgccgt
     2041 cggccatggt cagcttgccc ttgccggccc gctgtccggc cagcatcccg ccttcgtaga
     2101 ccgcgccgtc gggataggtg atccggccct gcccctcctt gacgccggca ttccactggc
     2161 cctcgtattt gtagccgttg ggctgggtca gcgtgccctt gccctgatgc agtcccttga
     2221 cgaactggcc cgtgtagacg ctgccattgg cgtagcgcgc caccccctcg ccggtgatct
     2281 cgccggcgat ccagtcaccc tcataggtgc cgccatcggg ataggtgatc ttgccgcgcc
     2341 cctcgggctt gcccttgacg aactggccga catagaccga tccgttggga aaggtggcct
     2401 tgccctgccc ccggatctcg ccctcgaccc agtcgccctc gtagacatag ccgttgggca
     2461 gcgtataggt gccctgcccg tgctgacggc cgttgcggaa cgtgccttcg tagacaccgc
     2521 catcatcgta tttcttggtg acgacctgcg catccgcgcc gcttgcgtcc gccatca
//
LOCUS       DTVW01000892            1548 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2097816, whole
            genome shotgun sequence.
ACCESSION   DTVW01000892 DTVW01000000
VERSION     DTVW01000892.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1548)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1548)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1548
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2097816"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1355)
                     /locus_tag="EYO87_11660"
     CDS             complement(<1..1355)
                     /locus_tag="EYO87_11660"
                     /inference="COORDINATES: protein
                     motif:HMM:PF00289.20,HMM:PF02785.17"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HIC66632.1"
                     /translation="MPRRLLVANRGEIACRIMQTASRMGIDCVAVHAADDAGSAHVAL
                     ASRAIDLGSEGPSAYLDVDALIKAAQETGCDAVHPGYGFLSESSAFVARLEAEGIGFA
                     GPPSATIALLGDKVAARRLARSVDVPVIAGPEDPVTLEQARAFFASLPDGSAAMLKAV
                     AGGGGRGIRPVETADALDRAFAASASEALSAFGDGALFIERLVRNARHVEVQVFGDGS
                     GAVTHMWDRDCSVQRRNQKLIEIAPAPHLPDKLRADIRAAALRIASEVRLRSLATVEF
                     LVEPNDGRFSFLEVNPRIQVEHTITEEITGLDLVQLQLRVLDGASLADLGLDAPLPTP
                     SGHAIQLRLNAERLGREGQVTPTTGRIRSLRPPTGPGLRFDTGLREEDEVTGRYDSLL
                     AKLIVHGRGLNAEASLGFAAQALDDCRIEGIETNAPLLADLLRAPELANGTLDTGFVG
                     RL"
     gene            complement(1469..>1548)
                     /locus_tag="EYO87_11665"
     CDS             complement(1469..>1548)
                     /locus_tag="EYO87_11665"
                     /inference="COORDINATES: protein motif:HMM:PF00890.22"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HIC66633.1"
                     /translation="EGLYVAGEDAGGAHGSNRLGGNGVS"
BASE COUNT          287 a          527 c          488 g          246 t
ORIGIN      
        1 agccggccga cgaaaccagt gtcgagcgtg ccgttggcca gttcgggcgc acgcagaaga
       61 tcagcgagaa gcggagcgtt tgtttcaatt ccctcgatcc ggcaatcgtc cagtgcctgc
      121 gcggcgaagc ccaggctggc ctcagcgttc aacccgcgtc catgcacgat cagtttcgcc
      181 agaaggctgt catatcgacc ggtgacctcg tcctcctcgc gcaggccggt gtcgaagcgc
      241 aggccgggac cggtcggcgg acgcaaagat cggattcgac cggtggttgg ggtgacctgt
      301 ccttcccgac ccaatcgttc ggcgttcagg cggagctgga tggcatgacc cgagggcgtg
      361 ggcaaagggg catcgagccc cagatcggca agcgacgccc cgtcgagcac ccgaagctgg
      421 agctgcacga gatcgaggcc cgtgatctcc tcggtgatcg tgtgctcgac ctggatacgc
      481 ggattgactt cgaggaagct gaagcgaccg tcattcggct ccaccaggaa ctcgacagtt
      541 gccaggctgc gcagccggac ctcggaggcg atgcggaggg ccgccgctcg aatgtctgcc
      601 cgcaatttgt cgggaagatg tggggcaggg gcgatttcga tcagcttctg gttccgcctc
      661 tgaacggagc agtcgcggtc ccacatatgg gtgacggcgc ccgacccgtc gccaaagacc
      721 tgcacctcca catggcgggc gttgcggacc agtcgttcga tgaagagcgc accgtcgccg
      781 aaggccgaca gcgcctccga tgcgctggcc gcgaacgccc tgtcgagtgc gtccgcagtc
      841 tcgactggcc tgatgcccct gccgccgccg ccggcgaccg ctttcagcat cgctgcggag
      901 ccgtcaggca gggaggcgaa gaaggcccgc gcctgctcca gcgtcaccgg atcctccggg
      961 cccgcgatga caggcacatc gacggatctg gccagtctgc gcgccgccac cttgtcgccc
     1021 agcagggcaa tcgtcgccga aggaggtcct gcgaacccga tcccctcggc ttcgaggcgg
     1081 gccacgaagg ccgaagactc gctgagaaat ccgtagccgg gatggacagc gtcgcagcct
     1141 gtttcctgcg ccgccttgat cagcgcatcg acatccagat aggccgacgg cccttccgac
     1201 ccgagatcga tcgcccggct cgccagggcc acatgcgccg atcctgcatc gtccgccgca
     1261 tggacagcga cacagtcgat ccccatccgc gacgccgtct gcatgatgcg acaggcaatc
     1321 tcgccccggt ttgccaccag aagccgacgc ggcatggatt acatcccgaa ctgggcgaga
     1381 gccagcacga tctgcgggac tgctgagatc agaagcacga cggcaaggtc catgaccatg
     1441 aaccagaaga cacccttgaa gatgtcagtc agctgacgcc atttccgccc agcctgttcg
     1501 atccatgcgc cccgcccgca tcctcgccgg cgacatacag cccttcca
//
LOCUS       DTVW01000893            1002 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2097992, whole
            genome shotgun sequence.
ACCESSION   DTVW01000893 DTVW01000000
VERSION     DTVW01000893.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1002)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1002)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1002
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2097992"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1002)
                     /gene="lptG"
                     /locus_tag="EYO87_11670"
     CDS             complement(<1..>1002)
                     /gene="lptG"
                     /locus_tag="EYO87_11670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011747240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptG"
                     /protein_id="HIC66634.1"
                     /translation="FLLILLLIDMIEMIRRFSGRDIGLGGAFRLAALNIASSFYSILP
                     LITVLAGIALFLGLARSSEMVAIRASGRSGIKVVTAPAVTAGLVGALAVGLLNPMVAA
                     TGARFDRAVAEIERDGSQTVSLGDSAVWLRQALISDGKEAGQIVIRARRASPDATTLY
                     DATFLVFGAGSGPDRRIEAAEAQLVPGEWRLRDARDYPLDQPNPEASARTDETLSLAS
                     DLTAQRIRDGFGRPEAVPVWQLPGFIAGLERAGFSAARHKVWFQMELARPFVMAAMVL
                     IAAAFTMRHVRGRNTGVAVLIAFGAGIGLFFLRNLAQILGDNGQVPPIMAGWAPPLVG
                     "
BASE COUNT          182 a          367 c          320 g          133 t
ORIGIN      
        1 accgaccagc ggcggcgccc agcccgccat gatcggcggc acctgtccgt tgtcacccag
       61 aatctgcgcc agattgcgca gaaagaacag cccgatcccg gccccgaagg cgatcagcac
      121 cgcaacgccc gtattgcgcc cgcgaacgtg gcgcatggta aaggcggccg cgatcagcac
      181 catcgccgcc atcacgaagg ggcgggccag ttccatctgg aaccagacct tgtgtcgcgc
      241 ggccgagaat cctgcccgct ccagcccggc gatgaagccc ggcaattgcc agaccggaac
      301 cgcctcgggg cggccgaacc cgtcgcgaat ccgctgcgcg gtcaggtccg aggccagaga
      361 cagggtttcg tccgttcggg ccgaagcctc ggggttgggc tggtccagcg gataatctcg
      421 cgcgtcgcgc aaacgccatt cgcccggcac cagctgcgcc tcggccgcct cgatccgccg
      481 gtccgggccg ctgcccgcgc cgaagacgag gaaggtggca tcgtagagcg tggtcgcatc
      541 gggactggcg cgtctggcgc ggatgacgat ctgcccggcc tccttgccgt cgctgatcag
      601 cgcctgccgc agccagactg cgctgtcgcc cagtgaaacc gtctgactgc cgtcgcgctc
      661 gatctcggcc acggcccggt cgaatctggc cccggtcgcc gcgaccatgg ggttcagcag
      721 gcccaccgcc agcgcgccga ccagcccggc cgtcactgca ggcgcggtca cgaccttgat
      781 cccggacctt cccgaagccc ggatcgcgac catctccgat gaccgcgcaa gccccagaaa
      841 cagcgcgatc ccggccagaa ccgtgatcag cggcaggatc gaatagaagg acgaggcaat
      901 gttcagcgcc gccagccgga aggctccgcc cagcccgata tcgcgcccgg aaaagcggcg
      961 gatcatctcg atcatgtcga tcagcagcag gatcagcagg aa
//
LOCUS       DTVW01000894            2442 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2098145, whole
            genome shotgun sequence.
ACCESSION   DTVW01000894 DTVW01000000
VERSION     DTVW01000894.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2442)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2442)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2442
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2098145"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(167..490)
                     /locus_tag="EYO87_11675"
     CDS             complement(167..490)
                     /locus_tag="EYO87_11675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018000149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66635.1"
                     /translation="MKWHHVQENWSAFYEAIQDKWPEADEAELDEIDGDQRGFVRYIS
                     ELTGQDPSESREEIREWLRGEIPSDVVMDPIHDNHSIALSSKYVNEGEDEYDDDARFG
                     DDEEE"
     gene            complement(617..2407)
                     /locus_tag="EYO87_11680"
     CDS             complement(617..2407)
                     /locus_tag="EYO87_11680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008328820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HIC66636.1"
                     /translation="MPLASLGKPAHGIAMYGEPALEAGFDQMPYANPAAPKGGSIRLA
                     EPGGFDSLKPWVLKGNPVWPILFQPGLLTETLMYRSLDEPFTLYGLLADTVETDPERT
                     WVEFTLRPEARFSDGSPVTVEDVMWSYETLGTQGHPRYRGAWAKVEKMEQTGERKIRF
                     TFKEKDRELAMLMGMRPILKKAQWEGRDFSLSGLDAPIASGPYLIDSVDPGRSITFRR
                     NPDYWGADLNVRKGQNNFDEIRFDYFGDANAMFEAFKAGEISVWRELSPRKWDEEYDF
                     PLAAQGKVVKSEIGNERPSGIMGLVMNTRNPLFADWRVRQAMIEAFNFQFINATLNGG
                     REPRITSYFANSSLAMRPGPAEGRVADLLRPFAADLPPGTLDGYTLPEGADRPLDRKG
                     LRRALKLMEEAGWTVQDGRMKNAEGRPFAFEIVLNQSGSAMRTASETQQIVDIYIEAL
                     RNLGIFPRVTELDSAQYVERTNNFQFDMTWYERALSLSPGNEQMLYWGSAAADQPGSR
                     NWMGMKNPAVDAMIAEILNAGSDDDFNAAVRALDRVLTAGRYVIPVSFSPVSRLAHDA
                     NLSYPEKATPLYGDWPGFMPELWWQDEAER"
BASE COUNT          442 a          793 c          720 g          487 t
ORIGIN      
        1 tgccagcgtc ttcagcgcca gcaccaccag ccccaccacg atactgccga tgccgatcct
       61 gatcgtctgg gtcatgggaa ggcaatctcc gggcacgaag gtctagagcc gcaccctttt
      121 gcagatcggg aacaagaact caaccgcgat ccggcgcggc gtcggcctat tcttcctcgt
      181 cgtcgccgaa gcgggcatcg tcgtcatatt catcctcgcc ctcgttgacg tatttggaac
      241 tgagcgcgat cgaatgattg tcgtggatcg ggtccatgac cacatccgat ggaatttcgc
      301 cgcgcagcca ttcgcggatc tcctcgcgcg attcggacgg gtcctgcccg gtcaattccg
      361 agatatagcg cacgaaaccg cgttgatcgc cgtcgatctc gtccagctcg gcctcatcgg
      421 cctcgggcca cttgtcctga atcgcttcgt agaaggccga ccagttttcc tgaacatgat
      481 gccacttcat ctcaatatcc tctgggcagg ccctgctgcg cccagcgggc gctgccggta
      541 atgtcctcgc cgatgccggc gacggtgttg cagccggcca ggatcgtgca ggccagcagc
      601 gtgaagatcg ttgctttcat ctctctgcct catcttgcca ccaaagctcg ggcatgaaac
      661 ccggccaatc tccgtaaagc ggcgttgcct tctcaggata cgacaggttg gcgtcgtggg
      721 ccagacgcga gaccggcgag aaactgaccg ggatcacata ccggcccgcg gtcagcacac
      781 ggtccagcgc gcggacggcg gcgttgaaat cgtcgtcact gccggcgttc agtatttcgg
      841 cgatcattgc gtccacggcg gggttcttca tgcccatcca gttgcggctg cccggctggt
      901 cggctgccgc cgatccccaa tacagcatct gttcattgcc gggcgacagc gacagcgcgc
      961 gttcatacca ggtcatgtcg aactggaaat tgttcgtccg ctcgacatat tgcgcggaat
     1021 ccagttcggt gacgcgggga aagatgccca gattgcgcag cgcctcgata tagatatcga
     1081 cgatctgctg ggtttccgag gctgtccgca tggcgctgcc cgactggttc agcacgatct
     1141 cgaaggcgaa ggggcggccc tcggcgttct tcatccggcc gtcctgcacc gtccagccgg
     1201 cctcttccat cagcttcagc gcgcggcgca ggcccttgcg gtccagcggg cggtcggcgc
     1261 cctcgggcag ggtatagccg tccagcgtac cgggcggcag gtccgctgcg aaggggcgca
     1321 gcaggtcggc cacccggccc tcggccgggc cgggacgcat ggcgaggctg gaattggcga
     1381 aataggacgt gatgcgcggt tccctgccgc cattcagcgt cgcgttgatg aactgaaagt
     1441 tgaatgcctc gatcatcgcc tgccgcacgc gccagtcggc aaacagcggg ttgcgggtat
     1501 tcatcaccaa ccccatgatc cccgagggcc gttcgttgcc gatctcggat ttcaccacct
     1561 tgccctgcgc cgccagcgga aagtcgtatt cctcgtccca tttgcggggc gacaattcgc
     1621 gccatacgct gatctcaccg gccttgaatg cctcgaacat ggcattggcg tcgccgaagt
     1681 agtcaaagcg gatctcgtcg aagttgttct ggcccttgcg cacgttcaga tccgcgcccc
     1741 agtaatcggg attgcgtctg aaggtgatgg aacggccggg atcgacgctg tcgatgagat
     1801 agggtcccga cgcgatcggc gcatccagac ccgaaaggct gaaatcgcgg ccctcccact
     1861 gtgccttctt gagaatcggc ctcattccca tcagcatcgc cagttcgcga tccttttcct
     1921 tgaaggtaaa gcggatcttg cgctcgcccg tctgttccat cttctcgacc ttggcccagg
     1981 cgccccgata gcggggatga ccctgtgtgc ccaaggtctc ataggaccac atcacgtcct
     2041 ccaccgtgac cggactgcca tccgagaacc tggcttcggg gcgcagggtg aattcgaccc
     2101 aggtccgctc gggatcggtc tcgacggtgt cggccagaag gccatagagc gtgaacggct
     2161 catccagcga gcgatacatc agcgtttccg tcagcagtcc gggctggaac aggatcggcc
     2221 agaccggatt gcccttcagc acccagggtt tcaacgagtc gaatccgccc ggttccgcca
     2281 gccgaatcga cccgcctttc ggtgcggccg gattcgcgta cggcatctga tcgaagcccg
     2341 cttccagggc aggttctcca tacattgcaa tgccatgagc aggttttcca agacttgcca
     2401 gaggcattga tgcaacagtg aacaggcccg ccaccaacgc ca
//
LOCUS       DTVW01000895            1124 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2100323, whole
            genome shotgun sequence.
ACCESSION   DTVW01000895 DTVW01000000
VERSION     DTVW01000895.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1124)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1124)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1124
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2100323"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..357)
                     /locus_tag="EYO87_11685"
     CDS             complement(<1..357)
                     /locus_tag="EYO87_11685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018001171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate kinase"
                     /protein_id="HIC66637.1"
                     /translation="MDRADILIGIDAGTSVIKAVAFDMAGHQIGAFSVPNRYLTAKGG
                     AATQSMDRTWQDCAAALRGLGEAIDGLAGRVAALSVTGQGDGTWLVGPDGPVGDAWLW
                     LDARAAPTVARLAASPA"
     gene            720..>1124
                     /locus_tag="EYO87_11690"
     CDS             720..>1124
                     /locus_tag="EYO87_11690"
                     /inference="COORDINATES: protein motif:HMM:PF10054.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2291 family protein"
                     /protein_id="HIC66638.1"
                     /translation="MTHFSSPAPKAPASSRRGLYLGLGVAAALLAGIAFDTTIVTIGS
                     ESDVRAQVFSPDDYGQQEFPRIAEFVKGKAVDAATLAPAVLQDKAAAAEQYGTPASTG
                     AIMFTTVTGAVAEGKSGIYTIQAEDVPEEITIR"
BASE COUNT          191 a          394 c          358 g          181 t
ORIGIN      
        1 cgccgggctc gccgccagcc gcgcgaccgt gggcgcggca cgggcatcca gccacagcca
       61 ggcatcgccc acgggtccgt caggcccgac aagccatgtc ccgtcgccct gaccggtcac
      121 cgacagggcc gcgacccgcc cggccagtcc gtcgatagcc tcgcccaaac cgcgcagcgc
      181 ggcggcgcaa tcctgccatg tccggtccat ggattgcgtg gccgcgccgc ctttggccgt
      241 cagatagcgg ttcggcaccg aaaacgcccc gatctggtgt ccggccatgt cgaaggcaac
      301 ggccttgatg accgatgtcc cggcgtcgat gccgatcagg atatcggcgc gatccatacc
      361 aaccctcccg gcggatgcct tgcgcggcag ccttgcttcg ggcttgtata gcatgagttc
      421 tttcggatgc atgtattttt ttacagacac ggcaatttat ttcggctaga ttgatcccga
      481 ggggtcctgc gccatgcgac gggccagggg aagaaacgat gaccgcgcgt tcgcgcagcg
      541 gcatcggcgc aggaccggag aggaggccgg cacgatgaga attgcttctg aaaagacggg
      601 ccagaccgcg cctgcaatcc tcgagccggg tgccgtcggc gcggcgaacc ggccgttccg
      661 tgcaccgcgc tgacctcgat tcgcccccgg atcgaccgcc gcaaccagag gatcgcccga
      721 tgacgcattt ttcgtccccc gcgccgaaag cgcccgcctc ctcccggcgc ggattgtatc
      781 ttgggctcgg cgtggccgcc gcccttctgg cgggcatcgc cttcgacacc acgatcgtga
      841 ccatcggttc cgagtccgat gtccgcgcgc aggtcttctc gccagacgat tacgggcagc
      901 aggaatttcc ccgcatcgcc gaattcgtga agggcaaggc ggtggatgcg gccacgctgg
      961 ccccggcggt cttgcaggac aaggcggcgg cggccgaaca atacggcact ccggcctcga
     1021 ccggggcaat catgttcacc accgtcaccg gcgccgtggc cgagggaaag tccggcatct
     1081 acacgatcca ggccgaggat gtgcccgagg agatcaccat ccgc
//
LOCUS       DTVW01000896            2533 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2100377, whole
            genome shotgun sequence.
ACCESSION   DTVW01000896 DTVW01000000
VERSION     DTVW01000896.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2533)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2533)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2533
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2100377"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1906
                     /locus_tag="EYO87_11695"
     CDS             <1..1906
                     /locus_tag="EYO87_11695"
                     /inference="COORDINATES: protein motif:HMM:TIGR03882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TOMM precursor leader peptide-binding protein"
                     /protein_id="HIC66639.1"
                     /translation="APAPARSGHVLLAGDADWVSPLAEELVSCGIAHLSVWAPVAGRD
                     AGRDAPNRGDPPLSPDLDLVVGAFAPRRPVLQVELEQSCRRAGIPFLGAEIIGAKGFA
                     GPVSRAGLAGCWLCARQRRRAHAPDPTAWARADGLARVHHSRPGPEVSRSFARSLSAE
                     ICRHLAADAAGALEGKIRILDLAAQTSSLHGFIPMPFCSTCGKDPVATQCRSAGPCTG
                     PRQRFRDWLDLETGVFVGPVLRDRPRPLPGTFIAVAEVAPFCGFRDDPIAAEPACGKG
                     LTEDEAMISAIGEAFERYAASRCDPRTLVRARMRDLDGPVLDPRQIGLYGRSQYAEPD
                     FPFRPFDPEAQAFWTTAVNPCSGARTWVLAEQVYYRLPAGYSNHLQQMTSNGLAAGAD
                     QQSAAMRAILEVIERDAVLTAWLRRDAGRLLPQDLCNTETRGIIARLRQAGASVALHL
                     LDGAGGVPVIMCMATGDGIRWPGLTATSAADPDIRRAAAKAVLEQASSGLGLARMLHE
                     ESGPRPCLPQEVRRGQFIDHACYYLGPPSQHVAFLRHAAYHPSVVDPSLPITGLDDLV
                     ERLDEQGLTVLLADLTPRDVAAASIRVVRALVTDLLPLSCGFGMLHLGSARLRHLPLG
                     TLNPAPHPFC"
BASE COUNT          381 a          839 c          825 g          488 t
ORIGIN      
        1 ggccccggca ccggcgcgat cagggcatgt cctgctggcg ggcgacgccg attgggtttc
       61 cccgctggct gaggaactcg tctcctgcgg cattgcgcac ctgtcggtgt gggctcccgt
      121 tgcgggacgt gacgccggcc gggacgcccc gaaccgcggc gacccgccgc tttcgccgga
      181 tctggatctg gttgtcggcg cgtttgctcc gcgaaggccg gtcctgcaag tcgagctgga
      241 gcaatcatgc cgccgtgcgg gaatcccgtt tctgggcgcc gagatcattg gcgcgaaggg
      301 cttcgccggc cccgtctcgc gggccggtct ggccggatgc tggctctgtg cccggcagcg
      361 tcgccgtgcg cacgcgcccg accccacagc ctgggcgcgt gccgacgggc tggcccgggt
      421 gcatcattcc cgacccggtc cggaagtgtc gcgatccttc gcccgatcgc tttctgccga
      481 gatctgccgg catctggctg cggatgcggc gggggctctg gaagggaaaa tccggatcct
      541 cgatctcgca gcccagacat caagcctgca tggcttcatc cccatgccgt tttgcagcac
      601 ctgcgggaag gatccggttg cgacccagtg cagatccgcc gggccgtgca cgggtccgcg
      661 gcaaaggttc cgcgactggc tggacctcga gaccggggtg ttcgtcgggc cggttttgcg
      721 cgatcgaccg cgccctttgc cgggaacttt catcgccgtg gccgaggtgg cgcctttttg
      781 cggcttccgc gacgatccca tcgcggccga acccgcctgc ggcaagggcc tgacggaaga
      841 cgaggcgatg atcagcgcga tcggggaagc cttcgagcgt tatgccgcat cccgctgcga
      901 cccgcggacg ctggtccggg cacggatgcg cgatctggac ggcccggttc tggacccccg
      961 ccagatcggt ctttacggcc gcagtcaata tgccgaaccg gattttccct tccggccctt
     1021 cgaccccgag gcgcaggctt tctggaccac cgccgtcaat ccgtgcagcg gggcgcggac
     1081 ctgggtgctg gccgagcagg tctattaccg gcttccggcc ggatattcga accatcttca
     1141 gcagatgacc tcgaacggcc tggcggcggg cgcggatcag caaagcgcgg caatgcgcgc
     1201 gatcctcgaa gtgatcgagc gcgacgcggt cctgaccgcc tggctgcgac gcgacgccgg
     1261 gcgcctgctg ccgcaggatc tgtgcaacac cgaaacgcgg ggcatcatcg cgcggctgcg
     1321 acaggccggt gcctctgtcg cgctgcatct gctggatggc gcgggcggcg tgccggtgat
     1381 catgtgcatg gcgacgggtg atggcatccg ctggcccggg ctgacggcaa cctctgcagc
     1441 cgatcccgat atccggcgcg cggcggcgaa agcggtgctg gaacaggcct catccgggct
     1501 tggacttgcg agaatgctgc acgaggaaag cggtccacgc ccatgcctgc cccaggaggt
     1561 gcggcggggg caattcatcg atcacgcctg ctactatctt gggccgccat cgcagcacgt
     1621 cgccttcttg cgtcatgccg cgtaccaccc gtcggttgtc gatccctcgc tgccgatcac
     1681 ggggctggat gatctggttg aacggctcga cgaacagggg ctgacggttc tgctcgccga
     1741 cctcacacct cgcgatgtgg cggctgcgtc gattcgtgtc gtgcgtgccc tggtgaccga
     1801 cctgctgcca ctatcctgcg gcttcgggat gctgcatctg ggctcggcgc ggctccgcca
     1861 cctgccgctg ggcacattga accctgcacc gcatcccttt tgttagacgt gccgccagat
     1921 tgcctgccgt tcgcgtcgtc ctcgaccgcc ggcgaaacca atcgacctga acgccttgat
     1981 ccccgttaga aaaagggcgg cgccgccatg taccatactg atccggaact ggggtgaaag
     2041 atgcctgcgg acctcctgat ttttatattt gtccaacctt tggtcctttg acatgctcgg
     2101 ctgaccggtt gctggcgaga cccgtgccgc cccagcacgg attgcaggca gtaaactgac
     2161 ccatatggcc gccggtggac gatttcattg cgcaagtcgg taatctcttt cagccaccct
     2221 gaggtcgtcc atgtgtcggg gctgtcaacc cgcgacacga gccaattctt cttgatcagg
     2281 agatcgagga ttggctcacg tcccgcgtgt tggccgcgta atttgctctt cagtgagcta
     2341 ccccccgaaa gttcagcagt tcgtcggttt tcccgagatg ccagactagc tgttccatcc
     2401 cggatgatca catggtccct cgccgatccg ccctgttcat ggcaaggtcg gtcctgcgcg
     2461 agattctgga cggggtgaga gtatgctgat ctctctgcac aagcaggcga cgacgacacc
     2521 gaagatccgg gcc
//
LOCUS       DTVW01000897            1357 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2100512, whole
            genome shotgun sequence.
ACCESSION   DTVW01000897 DTVW01000000
VERSION     DTVW01000897.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1357)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1357)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1357
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2100512"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(169..>1357)
                     /locus_tag="EYO87_11700"
     CDS             complement(169..>1357)
                     /locus_tag="EYO87_11700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017929248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HIC66640.1"
                     /translation="GGYGRAYFSATSAHTCTGDGGGMVARAGLPLQDMEFVQFHPTGI
                     YGSGCLITEGARGEGGYLTNSEGERFMERYAPTYKDLASRDVVSRCMTMEIREGRGVG
                     EESDHIFLNLMHLPPETLHERLPGISESARIFAGVDVTREPIPVLPTVHYNMGGIPTN
                     YWGEVLNPAEGAPDAVFPGLMAVGEAGCASVHGANRLGSNSLIDLVVFGRAAAIRAGQ
                     VIDREGPIPATNQAQVDHALERFDKIRNADGGTPTAELRNEMQRTMQADAAVFRTDKT
                     LADGVRKMEAIAAKLDDLKVTDRGLIWNTDLMETLELTNLMPNALATIVAAEARKESR
                     GAHAHEDYPERDDATWRKHSLARVEGNTVKLDYRPVHLEPLTKEAEGGIDLKKIAPKK
                     RVY"
BASE COUNT          202 a          451 c          444 g          260 t
ORIGIN      
        1 cgctgttgac aacgctgcgc gccacctgac gcgaggcggc gtcgagggtg gtcggggtgg
       61 tcacgaccgg tgcggtcggc gtggaaacgg tcgcggtcgg catcggtgcg acgcagcctg
      121 ccagcgtcag cgcggcgagg cccgaggcgg caatgatctt gaaacgcatc agtaaaccct
      181 cttcttcgga gcaatcttct tcaggtcgat cccgccttct gcctctttcg tcagaggttc
      241 cagatggacg gggcggtagt cgagtttaac cgtgttcccc tctacccttg caagcgaatg
      301 cttgcgccag gtggcgtcat cccgctcagg gtaatcctcg tgcgcatggg cgccacggct
      361 ttccttgcgc gcctcggcgg ccacgatcgt ggccagcgcg ttgggcatca ggttggtcag
      421 ttccagcgtc tccatcaggt cggtgttcca gatcaggcca cgatcggtca ccttcagatc
      481 atccagcttt gcggcgattg cctccatctt ccggacgcca tcggccagcg tcttgtcggt
      541 gcggaacacc gccgcgtcgg cctgcatggt gcgctgcatc tcgttgcgca actccgccgt
      601 cggcgtgccg ccatcggcat tgcggatttt gtcgaaccgc tccagcgcgt ggtccacctg
      661 cgcctggttg gtcgcgggga tcgggccctc gcggtcgatg acctgcccgg cccggatcgc
      721 ggccgcgcgg ccgaagacga ccaggtcgat caggctgttc gagccaagcc ggttcgcgcc
      781 atggacgctg gcacagccgg cctcgcccac cgccatcaga ccggggaata cggcgtcggg
      841 ggcgccctcg gccgggttca gcacctcacc ccagtaattc gtggggatcc cgcccatgtt
      901 gtagtgaacg gtcggcagaa ccgggatcgg ttcgcgcgtg acatcgacgc cggcgaaaat
      961 cctggcgctt tcgctgatgc ccggcagccg ttcatgcagc gtctcgggcg gcagatgcat
     1021 caggttcagg aagatgtggt cgctttcctc gccgacgccg cgaccctcgc ggatctccat
     1081 cgtcatgcag cggctgacca catcgcggct ggccagatcc ttgtaggttg gggcgtaacg
     1141 ctccatgaag cgttcgccct cgctgttggt cagatagcca ccttcgccgc gcgcgccttc
     1201 ggtgatcagg cagcccgagc catagatgcc ggtcggatgg aactgcacga attccatgtc
     1261 ttgcagcggc aggcccgcac gcgccaccat gccgccgcca tcgccggtgc aggtatgggc
     1321 gctggtggcg ctgaaatagg cgcggccata gccgccg
//
LOCUS       DTVW01000898            1628 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2100620, whole
            genome shotgun sequence.
ACCESSION   DTVW01000898 DTVW01000000
VERSION     DTVW01000898.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1628)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1628)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1628
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2100620"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..850
                     /locus_tag="EYO87_11705"
     CDS             <1..850
                     /locus_tag="EYO87_11705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011536959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HIC66641.1"
                     /translation="LASSLTTGRTKLIGLVSNNFLNPIFLQVFDLFTRGLQDRGLRPL
                     LVNLSNETDPENSVRMLRQYSVDGVVVASSTLPSDFAMAFRDAGVPVVHAFGRYSSSP
                     KVHVVGIDNREAGRLAARTLVERDYRDIAFLGGPEIATSTQDRFAGFMSELAAHPKIR
                     VSHSFALAYSFDAGRQEMLRLLKAGPAQAYFCGDDVLSIGALSAIADSGYSCPADIGI
                     IGLNDMEMARWENINLTTIHQPIEQIVTSSIELMLALLKDPDRHPEARIYSCPVVERG
                     TLRAPA"
     gene            complement(864..>1628)
                     /locus_tag="EYO87_11710"
     CDS             complement(864..>1628)
                     /locus_tag="EYO87_11710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008757159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HIC66642.1"
                     /translation="RKSGRICAVNYCYSAYPMIRQARAMVRAGEIGKVRLVITNFSHG
                     HHGDAKDADNPRIRWRYDPKMAGVSGQFADCGIHALHMAGFLCDDEVERLSADFASTI
                     PGRALEDDAMVNFRMESGIVGRLWTSSVAIGRQHGFDVQVFGETGGLRWASEQPNQLI
                     YTPLGGRTQIIEKGESGLHEEARRLSRVAVAHPEGFPLAVANIYCDLADAIAGEPRDG
                     LPDAAAGVRSMAAVHAAVTSARASGAWTEARPPMFR"
BASE COUNT          273 a          555 c          498 g          302 t
ORIGIN      
        1 actggcttcc tcgctgacca cgggccggac caagctgatc ggcctggttt ccaacaactt
       61 cctcaatccg atctttctgc aggtcttcga cctttttacc cgcggcctgc aagaccgggg
      121 attgcgcccc ttgctcgtga acctgtcgaa cgaaacggat ccggaaaatt cggttcgcat
      181 gctgcggcag tattccgtcg atggcgtggt cgtcgcctca tccaccctgc cttcggattt
      241 cgccatggcc ttccgggatg ccggcgtgcc ggttgtgcat gcctttggcc gctattcctc
      301 ctcgccgaag gtccatgttg tcgggatcga caaccgcgaa gcgggccgat tggccgcgcg
      361 caccctggtc gagcgcgact atcgcgacat cgcctttctt ggcggacccg agatcgcgac
      421 ctcgacccag gaccggtttg ccgggttcat gtccgaactg gcggcgcatc cgaaaatccg
      481 ggtcagccat tccttcgccc tcgcctattc cttcgacgcc ggacgtcagg agatgttgcg
      541 cctgctgaag gccgggccgg cccaggccta tttctgcggc gatgacgtcc tgtccatcgg
      601 cgcgctctcg gccatcgccg acagcggcta ttcgtgccct gcggatatcg ggatcatcgg
      661 cttgaacgac atggaaatgg cccgatggga gaacatcaac ctgaccacga tccatcaacc
      721 gatcgagcag atcgtcacct cgtcgatcga actgatgctg gcattgctga aagaccccga
      781 tcgccatccg gaggcgcgga tctattcctg cccggtggtc gagcggggca ccctgcgcgc
      841 ccctgcctga ccgatcggcg cgctcagcgg aacatcggcg gccgggcctc cgtccaggcg
      901 ccgctggctc ttgccgaggt cacggccgca tggaccgccg ccatcgagcg cacacccgcc
      961 gccgcgtcgg gcaacccgtc gcggggctct ccggcgatgg catcggccag gtcgcaatag
     1021 atattggcca cggcgagggg gaagccctcg gggtgggcga cagccacgcg agacaggcgc
     1081 cgtgcttcct cgtgcagccc gctttcgccc ttctcgatga tctgcgtgcg gccacccaag
     1141 ggcgtgtaga tcaactggtt cggctgctcg gacgcccatc gaagcccgcc cgtctcgcca
     1201 aagacctgga cgtcgaaacc gtgctgccgc ccgatggcca cggacgaggt ccagagccgg
     1261 ccgacaatgc cgctctccat ccgaaaattg accatcgcat catcctccag cgcgcggccc
     1321 gggatggtgg aggcgaaatc ggccgagagc cgttccacct cgtcgtcgca caggaaaccg
     1381 gccatatgca gggcatggat gccgcaatcg gcgaactggc cggaaacccc tgccatcttc
     1441 ggatcatagc gccagcggat ccgggggttg tcggcatcct tggcgtcgcc gtgatggccg
     1501 tggctgaaat tggtgatcac caggcgaacc ttgccgatct ctcccgcccg gaccatggcg
     1561 cgggcctggc ggatcatcgg ataggccgaa tagcaatagt tgactgcgca gatccggccg
     1621 gatttcct
//
LOCUS       DTVW01000899            1218 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2101368, whole
            genome shotgun sequence.
ACCESSION   DTVW01000899 DTVW01000000
VERSION     DTVW01000899.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1218)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1218)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1218
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2101368"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..700)
                     /locus_tag="EYO87_11715"
     CDS             complement(<1..700)
                     /locus_tag="EYO87_11715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002827588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HIC66643.1"
                     /translation="MRRYLTTAMALALMATGAQAGMEEAKAFLDAEIDNSTLTREEQE
                     AEMQWFIDAAKPFAGMNINVVSETLTVHEYESKVLAEAFSKITGINITHDLIGEGDVI
                     EKLQTQMQSGENVYDAYVNDTDLIGTHWRYQQARNLTDWMAGDGKDVTNPGLDIDDFI
                     GKSFSTAPDGKLYQLPDQQFANLYWFRYDWFNDPQIQADFKEEYGYDLGVPVNWSAYQ
                     DIAEFFTGREIDGKK"
     gene            complement(742..1140)
                     /locus_tag="EYO87_11720"
     CDS             complement(742..1140)
                     /locus_tag="EYO87_11720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001328573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate ABC transporter"
                     /protein_id="HIC66644.1"
                     /translation="MRRSVNLGFATIGLIWLGFVFWLTTLVPMRDEARDWTGSINPGG
                     WMAWTFPTALFFTIIAGLLILFTWLAIRFPETPRRGVLGITTTRGDRLFISLLGSAFI
                     SLIWLGTIGTPLWGGLAVALIYAAAVFRWV"
BASE COUNT          219 a          365 c          390 g          244 t
ORIGIN      
        1 ccttcttgcc gtcgatctcg cgcccggtga agaactcggc gatgtcctga taggccgacc
       61 agttgaccgg gacgcccagg tcatagccgt attcttcctt gaaatcggcc tgaatctggg
      121 ggtcgttgaa ccagtcgtag cggaaccagt agagattcgc gaattgctgg tcgggcaact
      181 gataaagctt tccgtcaggc gcggtgctga acgacttgcc gatgaaatcg tcgatgtcga
      241 ggcccggatt ggtcacgtcc ttgccatcgc ccgccatcca gtcggtcagg ttgcgcgcct
      301 gctgatagcg ccaatgggtg ccgatcaggt cggtgtcgtt gacataggcg tcatagacat
      361 tctcgcccga ttgcatctgg gtctgcaact tctcgatgac atcgccctcg ccgatcaggt
      421 cgtgggtgat gttgatgccg gtgatcttgc tgaatgcctc ggcaagcacc ttggattcgt
      481 attcgtggac cgtgagggtt tccgacacga cgttgatgtt catgcccgcg aagggcttgg
      541 ccgcgtcgat gaaccattgc atctcggcct cctgttcctc tcgggtcagg gtcgaattgt
      601 cgatctcggc atcgagaaag gctttcgcct cttccatgcc cgcctgcgcg cctgtcgcca
      661 tcagcgcaag cgccatggcg gtcgtcagat atcgtctcat ggtttccctc ccattggatg
      721 ccggtttggc tccggcggtt ttcacaccca gcgaaacacc gctgcggcgt agatcagtgc
      781 aacggccagt ccgccccaga gcggcgtgcc gatggttccc agccagatca ggctgatgaa
      841 ggccgagccg agaaggctga tgaacagccg gtccccgcgc gtggtggtga tgcccaggac
      901 gccccggcgc ggggtctcgg gaaagcggat ggcgagccat gtgaacagga tcagaaggcc
      961 cgcgatgatg gtgaagaaca gggcggtcgg gaaggtccag gccatccagc cgccgggatt
     1021 gatgctgccc gtccagtcgc gcgcctcgtc gcgcatcggc accagcgtgg tcagccagaa
     1081 cacgaagccc agccagatca ggccaatcgt cgcgaaaccg agattgacgg atctacgcat
     1141 ggtccggccc cttcgattgt gtcgcgcggc cggcagggac gatgccggga cgcggaggca
     1201 tcaggagacg gcgccgcg
//
LOCUS       DTVW01000900            1094 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2102744, whole
            genome shotgun sequence.
ACCESSION   DTVW01000900 DTVW01000000
VERSION     DTVW01000900.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1094)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1094)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1094
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2102744"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>1094
                     /locus_tag="EYO87_11725"
     CDS             <1..>1094
                     /locus_tag="EYO87_11725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010398273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="type I secretion system permease/ATPase"
                     /protein_id="HIC66645.1"
                     /translation="RKARSAGFPLFLAVALFSAVVNLLMLTGPLFMLQVYDRVLASRS
                     VETLTALFVLVVFLFLLMGVVDLARNRVTQRIAARFQDRMEGRVFTAALREGAITGDE
                     SAAAASGMRDLDSVQRFIGSPVLLAMFDLPWAPLFLAAVFMFHPLLGAVATIGGLILI
                     VSTIANRIMTKAPLQQSNASSTQAQRMADLYRDEGEVIGALGMRGATFARWRKAREEA
                     QVQSVRGADRASGFTVFSRSFRLFLQSAMLATGALLVLRQEVTPGAMIASSIMMGRAL
                     APIEQLVGGWALFQAAQDGWDRLSRLLTRQPPQVEHTPLPRPEAHIDVRQLSVAPPGQ
                     NIATIRGVSFEIRPGQALGVIGPSGAGKTT"
BASE COUNT          137 a          362 c          389 g          206 t
ORIGIN      
        1 gcgcaaggcc agatcggcgg gtttcccgct gtttcttgcc gtcgcgctgt tctcggccgt
       61 ggtgaacctg ttgatgctga ccggaccgct gttcatgttg caggtctatg accgggtgct
      121 ggcctcgcgc tcggtcgaga cgctgacggc gcttttcgtg ctggtcgtgt tcctgtttct
      181 gctgatgggc gtggtcgatc tggcccgcaa ccgcgtgacc cagcggatcg ccgcgcgctt
      241 tcaggaccgg atggaaggtc gcgtctttac cgccgccctg cgcgagggcg ccatcaccgg
      301 cgacgaatcg gccgccgccg ccagcggcat gcgcgatctg gattcggtgc agcgattcat
      361 cggttcgccg gtgctgctgg cgatgttcga tctgccgtgg gcgccgctgt ttctggccgc
      421 tgtcttcatg ttccatccgc tgctgggggc ggtggcgacg atcggcgggc tgatcctgat
      481 tgtctcgacc atcgccaacc ggatcatgac caaggccccg ttgcagcaat cgaacgcctc
      541 gtcgacgcag gcgcagcgga tggccgatct ctatcgcgac gagggcgagg tgatcggcgc
      601 cctggggatg cgcggcgcca cctttgcgcg ctggcgcaag gcccgcgaag aggcgcaggt
      661 gcagtcggtg cgcggggccg accgggcctc gggtttcacc gtgttttcgc gcagcttccg
      721 gctgtttctg caaagcgcga tgctggcgac cggcgcgctt ctggtgctgc gccaggaggt
      781 gacgccgggc gcgatgatcg ccagttcgat catgatgggc cgggcgctgg ccccgatcga
      841 gcaactggtc ggcggctggg cgctgttcca ggcggcgcag gacggatggg accggctgtc
      901 gcggctgctg acccggcagc cgccgcaggt cgaacacacc cccctgcccc gccccgaggc
      961 gcatatcgac gtccggcaat tgtccgtcgc cccgccgggc cagaacatcg cgacgatccg
     1021 cggcgtcagt ttcgagatcc ggcccggtca ggcgcttggc gtgatcggcc cgtccggcgc
     1081 cggcaagacc acgc
//
LOCUS       DTVW01000901            2473 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2102771, whole
            genome shotgun sequence.
ACCESSION   DTVW01000901 DTVW01000000
VERSION     DTVW01000901.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2473)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2473)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2473
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2102771"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..727
                     /locus_tag="EYO87_11730"
     CDS             <1..727
                     /locus_tag="EYO87_11730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007755539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HIC66646.1"
                     /translation="ASRRALRDIRRRVQMIFQDPALSLDPRATIGAAIAEPLLVRGVA
                     RGAALKARVARLLRQVGLRPEFASRYPHQFSGGQRQRVVIARALALEPDLVICDEPVS
                     ALDVSVRAQILNLLVELQRRTGVSYLFVSHDLGVVRHIADRVVVMYLGRFVEIAERET
                     FFAKAHHPYTRALMSAVPEPDPVLQRGKERFPLHGELPSPAKIPRGCAFHTRCPLATE
                     ICSQSRPELTPRPDGAFVACHHV"
     gene            758..>2473
                     /locus_tag="EYO87_11735"
     CDS             758..>2473
                     /locus_tag="EYO87_11735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020093705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin acylase family protein"
                     /protein_id="HIC66647.1"
                     /translation="MPETPSDTNPGTAPETFVLHGLEGPAEIRVDRWGIAHIEAGSLH
                     DVFFLQGWNAARDRLWQIDLWRKRGLGLLAADFGPGYLAQDHAARHFLYRGDMDAEWA
                     AYGDGTRDICAAFVAGINAWIALTRVEPDRLPPEFALLGTRPASWEPEDVVRIRSHAL
                     VHNALSEILRAQVLGRADAETDRLRADLEPPVDLGSLTGPDPRDVPLAACELYKLGTA
                     PVSFEPARLQATLDEAPSWSRVTAQAEVVRRLADEGSNNWAVHGERTETGRPILASDP
                     HRTQAVPSLRYLVHLRAPGLDVIGAGEPAVPGVSIGHNQDLAFGLTIFRADQEDVYVY
                     ETDPADPDRYRYGGGWESVVRVDERFAVKGCPDQHLALSFTRHGPILHQDHRRRRLVA
                     IRSVWAEPGSAAYLGSLSYLRADTVDAFARSLSHWGSPAVNHVAADTKGDIGWFTAGL
                     VPLRANWPGILPVPGDGRYEWQGFRDAAALPRAKNPAGGFVASANEMNLPKSFLAKGA
                     PSIGHEWADGSRARRIRQTLSEQTRHGLADSAALQTDVLSLIAKRLCACLENLPATGD
                     TGAALR"
BASE COUNT          385 a          845 c          810 g          433 t
ORIGIN      
        1 cgcctcgcgg cgtgccttgc gcgacatccg ccgtcgggtg cagatgatct ttcaggatcc
       61 ggccctgtcc ctggatcccc gcgcgaccat cggcgccgcc atcgcagagc ctttgctggt
      121 gcgcggcgtg gcccgcggcg cggccttgaa ggcgcgcgtg gcccggcttc tgcgtcaggt
      181 cggactgcgt cccgaattcg ccagccgcta tccgcatcag ttctcgggtg ggcagcgtca
      241 gcgggtggtg atcgcccggg cgcttgcgct ggagcccgat ctggtgatct gcgacgagcc
      301 ggtcagcgcg ctggacgtgt cggtcagggc gcagatcctg aacctgcttg tggaacttca
      361 gcggcggacc ggcgtgtcct acctgttcgt cagccacgat ctgggcgtcg tgcgccacat
      421 cgccgatcgc gtggtggtca tgtatctggg acgtttcgtc gaaatcgccg agcgcgagac
      481 cttctttgcc aaagcccatc acccctatac ccgcgcgctg atgtcggccg tgcccgagcc
      541 ggatcccgtt ctgcagcgcg gcaaggagcg gtttccgttg cacggcgaac tgccaagtcc
      601 ggcgaaaatt ccaaggggct gcgcctttca tacccgttgc ccgctggcca ccgaaatctg
      661 ttcgcagtcc cggcccgagc tgacaccgcg tcctgacggc gctttcgtcg cctgccatca
      721 cgtctgagcg gaccgagaca gcgagaaagc ccgacccatg cctgaaaccc cttctgacac
      781 gaatcccggg accgcgcccg agacattcgt cctgcacggc cttgaaggac cggccgagat
      841 ccgcgtcgat cgatggggca tcgcccatat cgaggcgggc agccttcacg atgtattctt
      901 ccttcagggc tggaacgcgg cacgcgaccg cctgtggcag atcgacctgt ggcgcaagcg
      961 cgggcttggc ctgctggccg ccgatttcgg tccggggtat cttgcacagg atcatgccgc
     1021 gcgacatttc ctctatcgcg gcgacatgga cgcggaatgg gcggcctatg gcgacgggac
     1081 gcgggacatc tgcgccgcct tcgtcgcggg catcaatgcc tggatcgcac tgacccgggt
     1141 cgagcccgat cgcctgccgc cggaattcgc gctgctggga acccgtcccg caagctggga
     1201 accggaagac gttgtgcgga tccgcagcca cgcgctggtc cacaacgcat tgtccgagat
     1261 cctccgcgcg caggttctag gcagggccga tgccgaaacc gatcggctgc gcgccgatct
     1321 ggaacccccg gtcgatctgg gatccctgac cggtccggat ccccgcgatg tgccccttgc
     1381 ggcctgcgaa ctctacaagc tcgggaccgc gccggtcagc ttcgaacccg cgcggctgca
     1441 agcgacgctg gacgaggcgc caagctggtc gcgcgtgacc gcccaggccg aggtggtgcg
     1501 ccggcttgcc gacgagggct cgaacaactg ggcggtgcat ggcgagcgaa ccgaaacggg
     1561 ccggccgatc cttgcaagcg atcctcaccg aacccaggcc gtgccatcgc ttcgctatct
     1621 cgttcacctg cgcgcgccgg gcctggacgt gatcggggcg ggcgaacccg ccgtgccggg
     1681 cgtgtcgata ggccataatc aggatctggc cttcgggctg acgatcttcc gggccgatca
     1741 ggaagacgtc tatgtctacg agaccgatcc tgccgatccc gatcgctacc gctacggcgg
     1801 cgggtgggaa agcgtggtgc gcgtcgatga acgcttcgcg gtcaagggct gtcccgatca
     1861 gcatcttgcc ctttccttca cccgccacgg accgatcctg caccaggacc accggcgccg
     1921 gcggcttgtg gcgatccggt cggtctgggc cgaaccggga agcgccgcct atctgggcag
     1981 cctgtcctat cttcgcgccg atacggtcga tgcctttgcg cgatcgttgt cgcattgggg
     2041 cagcccggcg gtgaaccatg tcgcggcaga cacgaaaggc gatatcggct ggttcacggc
     2101 cggtttggtg ccattgcgcg ccaactggcc cggaatcctg ccggttcccg gcgatggcag
     2161 atacgaatgg caggggtttc gggatgccgc cgcgctgcca cgggcaaaga acccggccgg
     2221 gggtttcgtg gcctcggcca acgagatgaa cctgccgaaa tcgtttctcg cgaagggcgc
     2281 gccttcgatc gggcacgaat gggccgatgg cagccgtgcc cgccgcatca gacaaaccct
     2341 gtccgaacag acgcgccacg ggcttgccga ttccgcggcc cttcagaccg acgtcctgtc
     2401 cctgatcgcg aaacgcctat gcgcctgtct cgagaatctc ccggcgaccg gcgacaccgg
     2461 cgctgccctt cga
//
LOCUS       DTVW01000902            1826 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2103561, whole
            genome shotgun sequence.
ACCESSION   DTVW01000902 DTVW01000000
VERSION     DTVW01000902.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1826)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1826)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1826
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2103561"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..550)
                     /locus_tag="EYO87_11740"
     CDS             complement(<1..550)
                     /locus_tag="EYO87_11740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011455564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase class II"
                     /protein_id="HIC66648.1"
                     /translation="MTQETRKTAARNWDKAGWRAYPRVQMPDYTDAAALQMVEAQLRR
                     YPPLVFAGEARRLREQLAEVAAGRAFLLQGGDCAESFAEFSADNIRDTFKVLLQMAVV
                     LTWGAQLPVVKVGRMAGQFAKPRSAPTETANGVELPSYRGDIVNGFDFTPEARIPDPQ
                     RMLAAYTQAAASLNLLRAFSTGG"
     gene            671..1747
                     /locus_tag="EYO87_11745"
     CDS             671..1747
                     /locus_tag="EYO87_11745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GlxA family transcriptional regulator"
                     /protein_id="HIC66649.1"
                     /translation="MCLIDNKASPMSADKPRRFTFLLLDRFTMLPFAAAIEPLRLANR
                     AAGKTLFEWRLIGPGGDVAVCSNGARVELDGGLDAEIAFGRDDVVILCGGIGIARVAT
                     KPVLNWLRKQARSGAGIGAVCTGAWVLAEAGLLDGRKATIHWENHDGLAEAFPEVDLY
                     RSVFVHDGNRLTAAGGTSSIDLMLHLIAEWHGDALAAEVADQMLHTAIRTDQDRQRLS
                     IPTRIGVRHPRLAAVIARMEGNLEDPISPATLARDAGMSTRQLERLFRRYLNRSPKRY
                     YMETRLARARNLLMQTEMSIIEVALASGFSSPSHFSKCYRAQYGSTPYRERGTGAAPN
                     GGENAPTVHGSGRPGTDRPLSRSR"
BASE COUNT          303 a          613 c          615 g          295 t
ORIGIN      
        1 agccgccggt cgagaaggcg cgcagcaggt tcagcgacgc cgccgcctgc gtataggcgg
       61 ccagcatccg ctgcgggtcg ggaatccgcg cctcgggggt aaagtcgaag ccgttgacga
      121 tgtcgccgcg atagctgggc agttcgaccc cgttcgcggt ctcggtcggc gcgctgcgcg
      181 gcttggcgaa ttgcccggcc atgcggccga ccttgacgac cggcaattgc gcgccccagg
      241 tcagcacgac ggccatctgc agcagaacct tgaaggtgtc gcggatgttg tcggcgctga
      301 attcggcgaa gctttccgcg caatcgccgc cctgcaacag aaaggcgcgg cccgctgcga
      361 cctcggccag ttgctcgcgc aggcgccgcg cctcgcccgc aaagaccagc ggcggatatc
      421 ggcgtaactg cgcctcgacc atctgcaacg cggcggcatc ggtgtagtcc ggcatctgga
      481 cgcgcggata ggcacgccag ccggccttgt cccagttccg ggcggcggtc ttgcgggtct
      541 cctgcgtcat ggcgcgcact ccttgaaaaa atggtcgggc cggtataggg ccgaaccgcg
      601 tcaagggaaa gggtggcgaa gccttgcgga cgcggcaacc gccccttgcg gcggcgcgaa
      661 atccctgctg atgtgcctca tcgacaacaa agccagtccg atgtccgccg acaagccacg
      721 ccgtttcacc ttcctgctgc tcgaccgttt cacgatgctg cctttcgccg ccgcgatcga
      781 acccttgcgg ctggcgaatc gggccgccgg aaaaacgctg ttcgaatggc gcctgatcgg
      841 gcccggaggg gatgtcgccg tctgctccaa cggggcccgc gtggaactgg atggcgggct
      901 ggacgccgag atcgccttcg ggcgcgacga cgtggtgatc ctgtgcggcg gcatcgggat
      961 cgcgcgcgtg gcgacgaaac cggtgctgaa ctggctgcgc aagcaggccc gcagcggcgc
     1021 cgggatcggc gcggtctgca ccggcgcctg ggttctggcc gaggccggtc tgctggacgg
     1081 ccgcaaggcc acgatccact gggaaaacca cgacggtctg gccgaggctt tccccgaggt
     1141 cgatctctac cgttcggttt tcgtgcatga tggcaaccgg ctgacggcgg cgggcggcac
     1201 ctcgtccatc gacctgatgc tgcatctgat tgcggaatgg catggcgacg cgctggcggc
     1261 cgaggtggcc gaccagatgc tgcacaccgc gatccgcacc gatcaggacc gtcagcgcct
     1321 gtcgatcccg acgcggatcg gcgttcgcca tccccgactg gccgccgtga tcgcgcggat
     1381 ggagggcaat ctggaagatc cgatcagtcc ggccaccctg gcccgcgatg ccggcatgtc
     1441 cactcggcag ctggaacgcc tgtttcgccg ttatctgaac cgcagtccca agcggtatta
     1501 catggagacg cggctggccc gcgcccggaa cctgctgatg cagaccgaga tgtcgatcat
     1561 cgaagtggcg ctggcttcgg gcttttccag cccgtcgcat ttctccaaat gctaccgcgc
     1621 gcaatatggc agcaccccct atcgcgaacg cggcaccgga gcggcgccga acggcggcga
     1681 gaatgcaccg accgtgcatg gatcgggccg gcccggaacc gaccggcctt tgtcacgatc
     1741 gcgttaaccc ttctttaacc atctgccggt aaaccgcgaa aaagcgcggg ccgatcgccc
     1801 gcggccggaa cgtccgggaa caggac
//
LOCUS       DTVW01000903            1355 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2104111, whole
            genome shotgun sequence.
ACCESSION   DTVW01000903 DTVW01000000
VERSION     DTVW01000903.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1355)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1355)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1355
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2104111"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..760)
                     /locus_tag="EYO87_11750"
     CDS             complement(<1..760)
                     /locus_tag="EYO87_11750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66650.1"
                     /translation="MEMVFHLGVHCTDGDRLLKTLLNNREWLLGKGTEIVTPQRHRGL
                     FEEALMALNGGRATPEMEQIMLDAMLTAEAPRRVVLSTPTFMGAPGRVCGRNEGLYPQ
                     MGSRAAALASLFPQAQAEFFLAIRNPATLLSEVLPIFTGGGYDKLLQGNRPQDLRWRD
                     AIRRLVRSVPGRRIVIWCHEDVPLIWPEIVRLAGKIPADAPLSGALVYMQEILGDSGL
                     AMLQEALGGRDQLSVQQRREIYARILADHAPRDAM"
     gene            862..>1355
                     /locus_tag="EYO87_11755"
     CDS             862..>1355
                     /locus_tag="EYO87_11755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HIC66651.1"
                     /translation="MSAPEIASHPHRHDHGLRQGSGRAWSVAAGLIAALVLLPVGTVI
                     WLALNPSENIWPHLMATVMPRYLMNTAILAAGTGMLAAAMGAGAAWLVSLYDFPGRRL
                     LEWALLLPLAVPAYIGAYALADFLDYSGPVQMALRGWFGWASARDYWFPQVRSLEAAI
                     LVMAA"
BASE COUNT          200 a          452 c          446 g          257 t
ORIGIN      
        1 ccatcgcgtc ccggggggcg tgatcggcaa ggatgcgggc gtatatttcg cgccgttgct
       61 gcacactcag ctggtcgcgg ccgccaagtg cctcctgaag catcgcaagc cccgaatcgc
      121 cgagaatttc ctgcatgtag accagggcgc cggacagcgg cgcgtcggcc gggatctttc
      181 cggccagccg cacgatttcg ggccagatca gcggcacgtc ctcgtgacac cagatcacga
      241 tgcggcgacc gggaaccgac cggaccagcc gccggatcgc gtcgcgccag cgcagatcct
      301 gcggccggtt gccctgaagc agcttgtcat agccgccgcc ggtgaagatc ggcaggactt
      361 cggacagcaa cgtcgccgga ttgcggatcg ccaggaaaaa ttccgcttgt gcctgcggga
      421 acaggctggc cagcgccgcc gcgcgcgacc ccatttgcgg atacagcccc tcgttgcggc
      481 cacagacccg gcccggcgcg cccatgaagg tgggcgtgga caggaccacg cggcgcggcg
      541 cctcggcggt cagcatcgcg tccagcatga tctgttccat ctcgggcgtg gcgcggccgc
      601 cgttcagggc catcagcgcc tcttcgaaca ggccccgatg gcgttgcggg gtgacgatct
      661 cggttccctt gcccagcagc cattcgcggt tgttgagcag ggtcttcaga agccggtccc
      721 cgtcggtgca atgcaccccg aggtgaaaca ccatctccat ccgctcggcc tcgttctttc
      781 ttcggtccgg ttcttttctg gcgtggcaag agtagctgcc attgatggac agtcaaacgc
      841 ctttagatta acgcagggtg aatgagcgcg cctgaaattg catcgcatcc tcatcgtcac
      901 gaccacggcc tgcgtcaggg cagcggccgc gcctggtccg tcgcggccgg cctgatcgcg
      961 gccctggtcc tgcttccggt tggcacggtg atctggctgg cgctgaaccc gtccgagaac
     1021 atctggccgc atctgatggc caccgtgatg ccacgctatt tgatgaatac cgcgatcctg
     1081 gcggccggaa cggggatgct ggcggccgcg atgggggcgg gcgcggcctg gctggtcagt
     1141 ctctatgact ttcccggccg ccgtctgctg gaatgggccc tgctgctgcc cctggccgtg
     1201 ccggcctata tcggcgccta tgccctggcc gattttctgg attattccgg ccccgtccag
     1261 atggccttgc gcggctggtt cggctgggcc agtgctcgcg attactggtt tccgcaggtc
     1321 cgctcgctgg aggccgcgat tctggtcatg gcggc
//
LOCUS       DTVW01000904            1736 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2113847, whole
            genome shotgun sequence.
ACCESSION   DTVW01000904 DTVW01000000
VERSION     DTVW01000904.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1736)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1736)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1736
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2113847"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..983)
                     /locus_tag="EYO87_11760"
     CDS             complement(<1..983)
                     /locus_tag="EYO87_11760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018699234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HIC66652.1"
                     /translation="MSQPDYVIVGAGSAGCALAYRLTEAGRTVALIEFGGSDFGIFIQ
                     MPGALSYPMNMPRYDWGFSSAPEDHLGGRRLATPRGKVLGGSSSINGMVFVRGNRKDF
                     DHWADQGATGWGYADVLPYFKRMENWHGGDSPLRGTDGPLHVTRGKRRNPLFNAFIEA
                     GQQAGWPYTPDYNGENQEGFGPMEATIWRGRRWSAANAYLRPALKSGKLRVIRALARR
                     VIFVGNRATGVEIQRKGRIETVGAGREVILSASSINTPKLLMLSGIGPADHLREHEIR
                     VRADRPGVGANLQDHLEIYMQYKALKPVSLYTYYNLLGKSRVGIEWLLQKTG"
     gene            complement(1013..>1736)
                     /locus_tag="EYO87_11765"
     CDS             complement(1013..>1736)
                     /locus_tag="EYO87_11765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HIC66653.1"
                     /translation="EGMRHVTMELGGKSPLIVFDDADLEDAVGAAVLANFYSSGQICS
                     NGTRVFLQEGIREAFLDRLSQRLGEVKMGDPLDPETQHGPIVSPAQAGKIRAMIAQGQ
                     AAGARILCGGPGEGAFVPPTVFTDASDDMVIARDEIFGPVMTTLSFRDEDEVIGRAND
                     TGFGLAAGVFTRDLARGHRVAAALEAGTCWINAYNLTPVEMPFGGVKLSGLGRENSAA
                     AIEHYSQLKSVYVGMGGVEAPY"
BASE COUNT          302 a          576 c          546 g          312 t
ORIGIN      
        1 cccgtctttt gcaggagcca ttcgatcccg acccggcttt tgcccagaag gttgtagtag
       61 gtatacaggc tgaccggctt caatgccttg tattgcatat atatttcaag gtgatcctgc
      121 agatttgcgc cgacgccggg acgatccgcg cggaccctga tttcgtgttc gcgcaggtga
      181 tcggccgggc cgatccccga cagcatcagc agtttcggcg tgttgatcga actggccgac
      241 aggatcacct cgcggcccgc accgaccgtc tcgatcctgc ccttgcgctg gatttcgacc
      301 ccggtggcgc ggttgccgac aaagatgacg cgccgcgcaa gcgcccggat gaccctcagt
      361 ttgcccgact tcagcgccgg gcgcagatag gcgttggcgg cggaccagcg acgtccccgc
      421 cagatcgtcg cctccatggg gccgaaaccc tcctgatttt cgccgttgta gtcgggcgta
      481 tagggccatc cggcctgctg gccggcctcg atgaaggcat tgaacagcgg attgcggcgc
      541 ttgccgcgcg tcacgtgcag gggcccgtcc gtgccgcgca gcgggctgtc gccgccgtgc
      601 cagttttcca tgcgcttgaa gtagggcagc acatcggcat agccccatcc ggtcgcgccc
      661 tgatcggccc aatggtcgaa atccttgcgg ttgccgcgca cgaagaccat gccgttgatc
      721 gaggacgatc cgcccagcac cttgccgcgc ggggtggcaa ggcggcggcc gcccagatgg
      781 tcctcggggg cgctggagaa gccccagtca tagcggggca tgttcatcgg ataggacagc
      841 gcgcccggca tctggatgaa gatcccgaaa tcgctgccgc cgaattcgat cagagcgacg
      901 gtccggccgg cctcggtcag acggtaggcc agcgcgcagc ctgcgcttcc cgctccgaca
      961 atgacataat ccggttgaga catcgtttat aaccccttgt caggatttca tttcaatagg
     1021 gcgcctcgac cccgcccata cccacataga cggacttcag ttgcgagtag tgttcgatcg
     1081 cggcggcgga attctcgcgc cccagaccgg acagtttcac gccaccgaaa ggcatttcga
     1141 ccggcgtcag attataggcg ttgatccagc aggtgccggc ttccagcgcc gcagcgaccc
     1201 ggtggccgcg cgccagatcc cgtgtgaaga cgcctgcggc aagcccgaac ccggtatcat
     1261 tggcgcggcc gatcacctcg tcctcgtcgc ggaaggacag cgtggtcatg accgggccga
     1321 agatttcgtc gcgcgcgatc accatgtcgt cggaggcatc ggtgaagacg gtgggcggaa
     1381 caaaggcgcc ctcgcccggc ccgccgcaca ggatccgcgc cccggcggcc tgcccctgcg
     1441 cgatcatggc gcggatcttt ccggcctggg cgggactgac gatgggccca tgctgggttt
     1501 cgggatcaag cggatcgccc atcttcacct cgcccaaacg ctgggacagg cgatccagaa
     1561 acgcctcgcg gatgccttcc tgcaggaaca cgcgggtgcc gttggagcag atctggcccg
     1621 acgaatagaa gtttgccagc acggcggcgc cgaccgcgtc ttccagatcg gcatcgtcaa
     1681 agacgatcag cggcgacttg ccgcccagct ccatcgtgac atggcgcatt ccctcg
//
LOCUS       DTVW01000905            1780 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2114199, whole
            genome shotgun sequence.
ACCESSION   DTVW01000905 DTVW01000000
VERSION     DTVW01000905.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1780)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1780)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1780
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2114199"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..939
                     /locus_tag="EYO87_11770"
     CDS             <1..939
                     /locus_tag="EYO87_11770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010397991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HIC66654.1"
                     /translation="MGKAMMGTGEAAGENRAQEAAERAIANPLLDEISLNGAKGVLIN
                     ITGGYDMTLFELDEAANVIRDKVDSDANIIVGSTLDPDMDGSIRVSVVATGIDAAAAA
                     AAEAPAPRRSMAEPLTQNPTMTRKEEPAAEAEESVPPRRTAAPVEARNPAPAPAPQAT
                     EDMPQPAYQPRPTARPAAVRIDEPSESFFAPRAASTPARGEPAPEVLDRLRKAVAHGG
                     ERRAQQAAAQQPQHQDAARGQSRMAGLGRMLERMAGHGEQGGASKPAASSIAERVSDR
                     VAARARQQDADFDDLASPDSAQDDVEIPAFLRRQAN"
     gene            1170..>1780
                     /gene="lpxC"
                     /locus_tag="EYO87_11775"
     CDS             1170..>1780
                     /gene="lpxC"
                     /locus_tag="EYO87_11775"
                     /EC_number="3.5.1.108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine
                     deacetylase"
                     /protein_id="HIC66655.1"
                     /translation="MQATLKKTVRLDGVGLHSGAPARLEMHPAPAGHGIVFRRVDLAT
                     ARDIPARWDNVIPSKLCTLLEGEGGVTLSTVEHVMAALVGTGIQNLLIEVDGPEVPIL
                     DGSAAPFVRAILRAGIALQNTPLRAIRVLRPVEVREGEAFARLSPADHLEIEFQIDFT
                     DAAIGRQEKRLDMANGAFLRELADSRTFCRQSDVEAMRRNGLAR"
BASE COUNT          316 a          608 c          582 g          274 t
ORIGIN      
        1 atgggcaagg cgatgatggg caccggcgag gccgcgggcg agaaccgcgc ccaggaggcc
       61 gccgaacgcg ccatcgcgaa tccgcttctg gacgagatca gcctgaacgg cgccaagggc
      121 gtgctgatca acatcactgg cggctatgac atgaccctgt tcgaactgga cgaggccgcg
      181 aacgtgatcc gcgacaaggt cgacagcgat gccaacatca tcgtcggctc gaccctggac
      241 ccggacatgg atggctcgat ccgcgtttcg gtcgtggcga ccggcatcga cgccgcggcc
      301 gccgcggctg ccgaagcgcc ggccccgcgc cgttcgatgg ccgaaccgct gacccagaac
      361 ccgaccatga cccgcaagga agaacccgcc gccgaggctg aggaatcggt gccgccgcgc
      421 cgcacggccg caccggtcga ggcacgcaat ccggcgccgg caccggcacc gcaggccacg
      481 gaagatatgc cgcaaccggc ctatcagccc cggcccacgg cccgccctgc cgccgtgcgg
      541 atcgacgagc cttccgaaag cttctttgcc ccgcgcgcgg cctcgacgcc agcccgcggc
      601 gagccggcgc ccgaggttct ggatcgtctg cgaaaggcgg tcgcccatgg tggcgaacgc
      661 agggcccagc aggccgccgc gcagcaaccc cagcatcagg acgcggcgcg cggccaaagc
      721 cgcatggccg gactgggcag gatgctggaa cgcatggccg ggcacggcga acagggcggc
      781 gcctcgaaac ccgccgcgtc ctcgatcgcg gaacgtgtca gcgaccgcgt cgcggcccgc
      841 gcccgccagc aggatgccga tttcgatgat ctggccagcc ccgacagcgc ccaggatgat
      901 gtcgagattc ccgctttcct gcgccgccag gccaactgag cccattcacg aattcgtcac
      961 gacctcaccc ttgaaagggc cgcgcatggc ggcccttttt agttttttgt cagaacgtta
     1021 cgccatttcg cgcgatgatt gtctctttcc gcgcggtgaa tgtttcaggc ggttacaatt
     1081 cgttaattga acgcccgtgc ggctgggcct agctgaagtt gcaccggaac gcacgatttc
     1141 ggaacaggaa tgatcgggca ggcagaacca tgcaggcgac attgaagaag acggtaagac
     1201 tggatggtgt cggattgcat tccggcgccc cggcacgtct ggaaatgcat cctgcccccg
     1261 cgggccacgg aatcgtcttt cgccgcgtcg acctggccac ggcgcgagac atcccggcgc
     1321 ggtgggacaa tgtgatccca tcgaaattgt gcaccctgct ggaaggcgag ggcggcgtga
     1381 ctttgtccac ggtggaacat gtcatggcgg ccctggtcgg gaccggcatc cagaacctgc
     1441 tgatcgaggt tgacggcccc gaagtgccga tcctcgacgg ttcggccgcg ccctttgtcc
     1501 gcgccattct tcgggccggg attgcccttc agaacactcc gctgcgcgcg atccgcgttc
     1561 tgcgcccggt cgaggttcgc gagggcgagg catttgcccg gctgtcgccc gccgaccatc
     1621 tggagatcga gttccagatc gacttcacgg acgccgcgat cggccgccag gaaaagcgtc
     1681 tggacatggc caatggcgcc tttctgcgcg aactggccga cagccgcacc ttctgtcgtc
     1741 aatccgacgt cgaggcgatg cgccggaacg ggctggcgcg
//
LOCUS       DTVW01000906            1703 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2114204, whole
            genome shotgun sequence.
ACCESSION   DTVW01000906 DTVW01000000
VERSION     DTVW01000906.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1703)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1703)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1703
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2114204"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
BASE COUNT          239 a          619 c          599 g          246 t
ORIGIN      
        1 accatggcgc agatcggcgc cgccttcgat gaacacggcg cgatgctgct gccgcggctg
       61 cgtacgatca ccaatctgga ccgcccccca cagcccggcg atccggcccc cgccgcaccc
      121 cttgcgcggc ggttgcaact ggcccggctg attgcccggc tgatcgcggc gcgccccgat
      181 ctgggcgcgg gccattccgt ccccgccctg gcgaaatcgc tggctgacct gatgaccgaa
      241 atgcagaccg aggggcgcga cgcgctggcg ctggagggga tcgataccgg cgatcatgcc
      301 cgccattggc agaacgcgct gaccttcctg cgcatcgccg ccggtttcca tctggacggc
      361 ccggcggtgg accgcgccga ccgccagcgc cggacggccg aggcgctggc cgcggactgg
      421 gcgcggggcg aaaacctgcc ggacgccccg gtgatcgtcg cgggctcgac cggatcgcat
      481 ggcgcgacgc ggctgttcat gcgggcggtg gcggcgctgc cgggcggcgc ggtggttttg
      541 cccggattcg atttcgacca gccgcaaccg gtctgggaca gcctcgatgc ccggtccgag
      601 gatcatccgc aggcccgttt tgcgccattg atcgcggctg ccggccatcc cgcgcgctgg
      661 accgacgccg tgccgccggc gcccgatcgc aaccgcctgt tgtcgctggc cctgcgcccc
      721 gcgcccgtca ccgatcaatg gatcgccgag ggccccgccc tgcccgacct gatcgcgccg
      781 acacgcggcc tgaccctgat cgaggccgat cagcccgcgc aagaggccga agcgattgca
      841 ctggtcatgc gcgaggcggt cgaaaccggc cgcgccgtga ccctgatcgc ggcggatggc
      901 aacctgatcc ggcgcgtgaa ctcggccctg gaccgctggc atctgcgcgc cgatgaaagc
      961 gcgggccagc cgatgccgct gactccgcag ggcctgtttc tgcgccagat cgccggaatc
     1021 ttcggcgagg cgctgaccat cgaccggctg ctgagcctgc tgaaacatcc gctggcggtg
     1081 accggatcga cgctgatcgg cgcaaacgag gcgcggcttg cggctcgcga gctggaactg
     1141 catctgcgcc gcaacggccc ggcctttccc gatggcgaca gcctgcggtc ctgggccgat
     1201 cggggcgacg agacgcgcag gatctgggcg cgatggctgg ccgttctgct ggaccggatg
     1261 gctgggtttg cgaccgattc ggcaccccgg ccgcttgccg cgcgccttgc ggaactgcga
     1321 gccctggccg aagatttcgc cgccggaccg gggggcgatc ccgaaacctc gcgcctgtgg
     1381 gcgggcagcg gcggcgcgct ggcccgcgcg gtcctggaca acctggccga acatgccgga
     1441 cacggccccg acatgggccc cgccgatttc gccgccctgc tgttcgagga attgcagtcc
     1501 caccagcttc gcaacgaagg tgagacctgc catctgctgc aaatccgcgg cacccgcgag
     1561 gcgcggatcc tgaataccgg cacggtgatc ctgtcgggac tgaacgaagg cggctggccg
     1621 caggcactgg accccgatcc gtggctgtcg cgcgacatgc gggcggcggc gggcctgacc
     1681 ctgccggaac gcctgatcgg gct
//
LOCUS       DTVW01000907            2703 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2116261, whole
            genome shotgun sequence.
ACCESSION   DTVW01000907 DTVW01000000
VERSION     DTVW01000907.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2703)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2703)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2703
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2116261"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..362
                     /locus_tag="EYO87_11780"
     CDS             <1..362
                     /locus_tag="EYO87_11780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_353506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HIC66656.1"
                     /translation="GYDQMVGKRFARGLDLSGGEWQKLAIARAYMRDAQVLVLDEPTA
                     ALDARAEFEVFQRFKDLSQGRTALLISHRFSSVRMADRIVVVEDGHVLDEGTHDELVA
                     REGRYRELFDLQAQGYR"
     gene            complement(368..1924)
                     /locus_tag="EYO87_11785"
     CDS             complement(368..1924)
                     /locus_tag="EYO87_11785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011750262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HIC66657.1"
                     /translation="MDLLEDAPGSNAHEFTVSELSGAVKRSIEDQFGRVRVRGEIGRV
                     SRPGSGHLYFDLKDDRSVLAAVTWKGQAARLAQRPEEGMEVVATGRMTTFPGQSKYQL
                     IVDQIEPAGAGALMAMLEKRRKALAAEGLFDQDRKRALPFLPRVIGVVTSPSGAVIRD
                     ILHRLRDRFPTRVIIWPVAVQGEGCAPQVTAAIRGFNALDESGPVPRPDLLIVARGGG
                     SIEDLWGFNDEAVVRAAADSRIPLISAVGHETDTTLIDFVSDRRAPTPTAAAEIAVPV
                     LAELAARLAEAQARLTRCAQGHIERPRQRLRDLGRAMGRPAALTEPARQRLDLWAARL
                     DPALRGLVRARRHQLQSRPIPAATLRQFTAAKRHGLDRLGVRLDVARERRLERRRDRI
                     AALAERLTASLGRTIATTRRSVADQTERLAKLSARLDTTMARMTATRWAALETLDRTR
                     QTLGYTQTLKRGFAVVHGPEGLITSAENARQSGRFEVEFTDGRVPVRRDATPQKASRK
                     RQPPQQKTLF"
     gene            1987..>2703
                     /gene="purD"
                     /locus_tag="EYO87_11790"
     CDS             1987..>2703
                     /gene="purD"
                     /locus_tag="EYO87_11790"
                     /EC_number="6.3.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011047083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylamine--glycine ligase"
                     /protein_id="HIC66658.1"
                     /translation="MNILILGSGGREHALAWAIRQNPKCDRLIVAPGNAGIAAIARCA
                     DLDIVSRGDVLAFAEEHAIDFVVIGPEAPLAAGIADALREAGFLVFGPSQAAARLESS
                     KAFTKEICDASGAPTAAWARFGNAAAARNDVTRRGAPIVVKADGLAAGKGVTVAETVD
                     QAHSAIDAIFDGEFGDTSVVIEDFMEGEEASFFVLCDGRDCLAMGTAQDHKRVGEGDT
                     GPNTGGMGAYSPAPVLTESLQ"
BASE COUNT          417 a          941 c          922 g          423 t
ORIGIN      
        1 aaggatacga ccagatggtc ggcaagcgtt tcgcccgcgg gctggatctg tcgggtggcg
       61 aatggcagaa actggccatc gcgcgggcct atatgcgcga cgcgcaggtg ctggtcctgg
      121 acgaacccac cgcagccctg gacgcccgcg ccgaattcga ggtgttccag cgtttcaagg
      181 acctgtcgca ggggcggacg gcgctgctga tctcgcaccg gttctcgtcg gttcggatgg
      241 ccgaccggat cgtcgtcgtc gaagatggtc atgtcctcga cgagggtacc catgacgaac
      301 tggtcgcccg cgaaggccgc tatcgcgaat tgttcgacct tcaggcgcag ggctatcgct
      361 gagggcgcta gaacagggtc ttctgctggg gcggctgacg ttttctcgac gctttctgcg
      421 gcgtggcatc ccggcggacc ggaacgcggc catcggtgaa ctccacctcg aaacggccgc
      481 tctgccgcgc gttctcggcc gaggtgatca gcccctcggg tccatgcacc acggcaaagc
      541 cgcgtttcag cgtctgggta tagcccagcg tctgccgcgt ccggtccagc gtttccagcg
      601 ccgcccaccg cgtcgcagtc atgcgcgcca tcgtggtgtc aagccgcgcc gacagtttgg
      661 ccagccgctc ggtctgatcg gccaccgagc gacgcgtcgt ggcgatcgtc cggcccagtg
      721 aagcggtcag acgttcggcc agggccgcga tccggtcgcg gcggcgttcc agcctgcgct
      781 cgcgcgcaac gtccagacgc acccccaacc ggtcgagccc gtggcgcttg gccgccgtga
      841 actggcgcag ggtcgcggcg ggaatcgggc gcgactgcaa ctggtgccgc cgggcccgga
      901 ccagcccgcg caaggccggg tccagccgcg cggcccacag gtccagccgc tgtcgggccg
      961 gttcggtcaa tgcggccggc cggcccatcg cgcggcccag atcacgcaga cgctggcggg
     1021 gacgctcgat atgaccctgc gcacagcgcg tcagccgggc ctgtgcctcg gccagccgcg
     1081 cggcaagttc cgccagcacc ggcactgcga tttcagccgc ggcggtgggt gtcggcgcgc
     1141 gccgatccga gacgaaatcg atcaatgtgg tgtcggtttc gtggcccacc gcggaaatca
     1201 gcgggatgcg gctatcggcg gcggcgcgga caacggcctc gtcgttgaag ccccaaagat
     1261 cctcgatgct gccgccgccc cgggcgacga tcagcaggtc gggacgcggc accggtccgg
     1321 actcgtccag cgcgttgaaa cccctgatcg cggcggtgac ctgcggggcg caaccctcgc
     1381 cctgcacggc cacgggccag atgatcaccc gggtcggaaa acggtcgcgc agccggtgca
     1441 ggatgtctcg gatcaccgcg cccgagggcg aggtgacgac cccgatcacc cgcggcagga
     1501 aaggcagcgc gcgcttgcgg tcctgatcga acagcccttc ggccgccagc gccttgcggc
     1561 gtttctccag catcgccatc agcgcgcccg cgccggccgg ctcgatctgg tcaacgatca
     1621 gctggtattt cgactggccc ggaaaggtgg tcatgcgacc cgtggccacg acctccatcc
     1681 cctcttcggg gcgctgcgcc aggcgggccg cctgcccctt ccacgtcacc gccgccagaa
     1741 ccgagcggtc atccttgagg tcgaaataaa gatgccccga tccgggacgc gacacgcgcc
     1801 cgatctcgcc gcgcacgcgg acccgcccga actggtcctc gatgctgcgc ttgaccgcgc
     1861 ccgacagttc cgagacggtg aattcatggg cgttgctgcc cggcgcgtct tccagcaggt
     1921 ccattcggct tgtccccctt cgccggtcac actagaacgc gcgcgagacg ggcgaaaggg
     1981 cggcagatga acatcctgat cctgggcagt ggcgggcgtg aacatgcgct ggcctgggcc
     2041 atccggcaga accctaaatg cgaccggctg atcgtcgcgc cgggcaatgc aggcatcgcg
     2101 gcaatcgcgc gctgcgctga tctggacatc gtttcccgcg gcgacgtgct ggccttcgcc
     2161 gaggaacacg ccatcgattt cgtcgtcata ggacccgagg cgcccctggc cgccggcatc
     2221 gccgatgcgt tgcgcgaggc cgggtttctg gttttcggcc cctcgcaggc ggcggcgcgg
     2281 ctggaatcct cgaaagcctt caccaaggaa atctgcgatg ccagcggcgc acccaccgcc
     2341 gcctgggccc gcttcggcaa tgcggctgcc gcccgcaacg acgtgacccg ccgcggcgcg
     2401 ccgatcgtgg tcaaggccga cgggctggcg gcgggcaagg gcgtcaccgt ggccgagacc
     2461 gtcgatcagg cgcattccgc catcgatgcg atcttcgatg gcgaattcgg cgacacctcg
     2521 gtggtgatcg aggattttat ggagggcgag gaagccagct tcttcgttct ctgcgacggc
     2581 cgggattgcc tggccatggg caccgcacag gatcacaagc gcgtgggcga gggcgatacc
     2641 ggcccgaata ccggcggcat gggcgcctac agcccggcgc ccgtcctgac cgagtcattg
     2701 cag
//
LOCUS       DTVW01000908            2113 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2116276, whole
            genome shotgun sequence.
ACCESSION   DTVW01000908 DTVW01000000
VERSION     DTVW01000908.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2113)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2113)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2113
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2116276"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            622..905
                     /locus_tag="EYO87_11795"
                     /pseudo
     CDS             622..905
                     /locus_tag="EYO87_11795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020022978.1"
                     /note="required for the use of phosphonate and phosphite;
                     frameshifted; incomplete; partial in the middle of a
                     contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-phosphorus lyase complex subunit PhnI"
     gene            902..1510
                     /locus_tag="EYO87_11800"
     CDS             902..1510
                     /locus_tag="EYO87_11800"
                     /inference="COORDINATES: protein motif:HMM:PF13419.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family phosphatase"
                     /protein_id="HIC66659.1"
                     /translation="MNRATKAVVFDIGNVLVGWDPRPAFAPDLDGPEAVEAFLTRIDF
                     ARLNLRADGGARFAALAAELDDPADADRLAAYPRRFADTLSPPIEASWALMERLRERG
                     FAIHAITNWSAETWPIGVAALPRLGRAFGTTIVSGQVGMIKPDPAIFRLFCQRAGLAP
                     ADCLFIDDNPANVAAAKGIGMDGLPFTSAEALEAALIERRLL"
     gene            1507..>2113
                     /locus_tag="EYO87_11805"
     CDS             1507..>2113
                     /locus_tag="EYO87_11805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019963632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-phosphorus lyase"
                     /protein_id="HIC66660.1"
                     /translation="MSDRACNFVHLDEDTKRMIRRAILKAIAVPGYQVPFAGREMPMP
                     YGWGTGGVQVAAATLVPEDVLQVIDQGADDTTNAVSIRRFFQRTAGIATTGCTRDATL
                     IQTRHRITETALSSDQILVYQVPIPEPMRFLKPRESETRRIHAMADSGLMQVRLYEDI
                     ARHGEIATSYAYPVEVAGRCVMDPSPIPSSAKASAVRRRLAT"
BASE COUNT          362 a          729 c          687 g          335 t
ORIGIN      
        1 aaagccatag cgggcgggcg cggcgaccag atcgcgttgg gggcgcggca ggcctgtcgt
       61 cccgatatcc tcgcccgaca gccaccggcc ggccagatcg tccaactgcc ccggcggcgg
      121 cgcccagtaa atcgcaagtc tcatgatccc tcgctaaccg ctttgcaagg cggatgcatg
      181 tcacggctgt cgattcaccc atccgacgga accttcacgg aaccgtcccc aaggcgtcaa
      241 gggatcgtca cgggacgcgc gcaaggaatc ttccggacaa ggcaggggca gcaatgcgca
      301 tcgaggccga gaacatgatc cgcgatttcc gcgccatgcg cgcggttgat cgcgtcagct
      361 tcgtcgtcga gacgccgatg atgatcggca tgatcggcag gttgatccac ggccaggcgc
      421 ggcgccgacg ccgcgaggcg cgtccgtccg actaaccgtc gtgactgggc gacagggtca
      481 cccgttccgc cgcccaccag gtcatcccgc aggccgccag agccaccgtg atcgactggc
      541 tttcgcgcag ccgcgcggac agatcgggca acggatccgc cggaaaacag gcgcagaaca
      601 gcgcaaccgg cagccgcgcc tttcacccgc cgctacggcc tcagcttcgg acagaccgag
      661 cgcaaggttc tgtccgtggc gctggtcgat cgcgcgctga gttggcaggg accgggcaaa
      721 gaggatcagg gcgccccggc acaggatccc gaattcgtgc tgtccactgc gacaacattc
      781 aggcaaccgg atttctggaa catatcaagc tgccccacta tgtcgatttc cagtccgagc
      841 tggaactggt gcgcaggttg cgtgcctcgg ccggcgaggc cggggcaaag ggggacacga
      901 catgaaccgc gccacgaaag ctgtcgtctt cgatatcggc aatgtgctgg tcggctggga
      961 tccgcgcccg gccttcgccc ccgatctgga tggacccgag gcggtcgagg cgttcctgac
     1021 ccggatcgac tttgcccgcc tgaacctgcg cgccgatggc ggggcccgct tcgccgcgct
     1081 tgccgccgaa ctggacgatc ccgccgacgc ggaccggctt gccgcctatc cgcgccgttt
     1141 cgccgacacg ctgagcccgc ccatcgaggc cagctgggcc ctgatggaac gcctgcgcga
     1201 gcgtggcttc gcgatccacg cgatcaccaa ctggtcggcg gaaacatggc ccatcggcgt
     1261 cgcggccctg ccgcggctgg gccgggcttt cgggaccacc atcgtttccg ggcaggtcgg
     1321 catgatcaag cccgatccgg ccatcttccg cctgttctgc cagcgcgccg ggctggcgcc
     1381 cgccgattgc ctgttcatcg acgacaatcc ggccaatgtc gccgccgcga aaggcatcgg
     1441 catggacggg ctgcctttca cctcggccga ggcgctggaa gccgcgctga tcgaaaggcg
     1501 gcttctgtga gcgatcgggc ctgtaatttc gtccatctcg acgaggatac caagcgcatg
     1561 atccggcgtg cgatcctgaa ggcgatcgcg gtgccgggct atcaggtgcc ctttgccggc
     1621 cgcgagatgc cgatgcccta tggctggggc accggcggcg tgcaggtagc ggcggcgacg
     1681 cttgtgcccg aggatgtgct gcaggtcatc gaccagggcg ccgacgacac cacgaatgcg
     1741 gtcagcatcc gcaggttctt tcagcgcacc gccggtatcg ccacgaccgg gtgcacccgt
     1801 gatgccacgc tgatccagac ccgccaccgg atcaccgaaa ccgccctgag cagcgaccag
     1861 atccttgtct atcaggtgcc gatcccggaa ccgatgcgct ttctgaagcc gcgcgagagc
     1921 gaaacccgcc gcatccacgc catggccgat tccgggctga tgcaggtgcg gctgtatgag
     1981 gacatcgccc gtcacggcga gatcgccacc tcctacgcct atccggtcga ggtcgcgggg
     2041 cgctgtgtca tggatccctc gccgatcccg agctcggcga aggcatcggc ggtgcgccgc
     2101 aggttggcaa cca
//
LOCUS       DTVW01000909            5267 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2116294, whole
            genome shotgun sequence.
ACCESSION   DTVW01000909 DTVW01000000
VERSION     DTVW01000909.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 5267)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5267)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5267
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2116294"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..735)
                     /locus_tag="EYO87_11810"
     CDS             complement(<1..735)
                     /locus_tag="EYO87_11810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HIC66661.1"
                     /translation="MKHYLISGVGGVLAGALLTTQIAGPLVAQEAGKNASVYEQLELF
                     GNVFERVRADYVEAPDDKKLIEAAINGMLTSLDPHSSFLAANDYEDMQTQTRGSFGGL
                     GIEVSQEDGLVKVVSPIDDTPAAKAGVKTGDFITHVNGESLMGLTLDEAVDMMRGPVG
                     SDITVTILREGEKEPFDLTMTRDTIKLTVVKSRVEGHAVILRVSTFNDETYDTLKTEL
                     DKAVKEVGGIDKVTGFVLDLRNNPGGL"
     gene            complement(752..1942)
                     /locus_tag="EYO87_11815"
     CDS             complement(752..1942)
                     /locus_tag="EYO87_11815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_354016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase M23"
                     /protein_id="HIC66662.1"
                     /translation="MIARLILISALGALLPVAPLFAPSAMAASPASEAVTDAKDAAAQ
                     LRAAIGKLAEAVSADDQVTALTEVIRGYELGLAALREGLRQASAREGELRARFEDQRD
                     RLASVLGAMTALQQSPEATMLLHPAGALANARSGMILSDVTPGLKSEAERLKADLDEI
                     STVRALQSAAAEMLGSGLASVQEARRLLASAVTDRSTMPIRFAEAPEELQKLRDAAES
                     LDQFAAGVAGIEMDVGAPREDFEGAQGSLPLPVVGSVLRPYGEADAAGVKRPGWVIAT
                     APAALVTTPWPATIRYRGPLLDYGNVMILEPARGYLLIFAGMAQVFGEIGDVLKAGDP
                     VGLMGGKEAPEQEFGAQFVADAARGGDAGQTESLYLELRKEQETLDPADWFVLNPIVE
                     PQED"
     gene            complement(1939..3456)
                     /locus_tag="EYO87_11820"
     CDS             complement(1939..3456)
                     /locus_tag="EYO87_11820"
                     /EC_number="5.4.2.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-bisphosphoglycerate-independent
                     phosphoglycerate mutase"
                     /protein_id="HIC66663.1"
                     /translation="MTKPVILCILDGWGISDRPEQSAPDQARTPNFDRLMRHCPHARL
                     TTFGPDVGLPSGQMGNSEVGHTNIGAGRVVAMDLGQIDLAIEDGSFFGNETLGGFVAR
                     LKETGGSAHLMGVVSDGGVHGHIRHVLAAAKAVSEAGVPVVVHAITDGRDVPPQSAKG
                     FVTDLQGNLPEGCRIGTVIGRYFAMDRDKRWDRVERAFRAIMAGEGEAAASADAAVAA
                     AYGREETDEFIKPFVIDGYNGAMDGDGFFCLNFRADRAREILSALADPDFAEFDTGDR
                     PQWAALLGMVDYSDRHNDWMASAYPKRQVVNTLGAWVAGRGLRQFRLAETEKYPHVTF
                     FLNGGKEAAEPGEDRFMPQSPKVATYDLAPEMAAAEVSDKLVEAIGAGYDLIVVNFAN
                     PDMVGHTGSLPAAIRACEAVDEGLGRMLQALDRAGGAAVIIADHGNCETMINPETGGP
                     HTAHTTNPVPVIVYGGPDGATLHDGRLADVAPTVLRLMDLDQPAEMTGQSLIETA"
     gene            complement(3648..4115)
                     /gene="rlmH"
                     /locus_tag="EYO87_11825"
     CDS             complement(3648..4115)
                     /gene="rlmH"
                     /locus_tag="EYO87_11825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009806979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (pseudouridine(1915)-N(3))-methyltransferase RlmH"
                     /protein_id="HIC66664.1"
                     /translation="MRIDIVAVGRLKKAPEAALVADYLDRFAKTGRGLGLPAVTMHEV
                     EDRRGGGMAAEALLLERAIPQGAALVALDERGDQPTSPDFAARIAGYRDGARDLCFVI
                     GGAGGLESGLRGRSEWQISFGRMVWPHLLVRVMLAEQLYRAATILAGAPYHRA"
     gene            complement(4120..4485)
                     /gene="rsfS"
                     /locus_tag="EYO87_11830"
     CDS             complement(4120..4485)
                     /gene="rsfS"
                     /locus_tag="EYO87_11830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008562485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HIC66665.1"
                     /translation="MSSDQLLNRILSSLEDDKAEDIVTIDLRGRSAIADHMVIASGRS
                     ARQVGAIAEHLAEKFKADTGRSARIEGKDAGDWVLVDTDDVIVHVFRPEVRDFYQLEK
                     MWMPADALSRVRQPAHPAP"
     gene            complement(4619..>5267)
                     /locus_tag="EYO87_11835"
     CDS             complement(4619..>5267)
                     /locus_tag="EYO87_11835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005851033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="mechanosensitive ion channel"
                     /protein_id="HIC66666.1"
                     /translation="TGLAVLSGAIGVGLGFGLQKVVSNLVSGVIILLDKSIKPGDVIS
                     LGDTFGWIEELGARYVSVVTRDGKEYLIPNEDLVTGQVVNWSHTNNFVRLDLNFGTSY
                     GDDPHKVSEIAINAALTVKRVLAQRRPVCWVTGFGDSSVDYVLRFWIGDAEAGLTNVR
                     GQVYLALWDGFVENGISIPFPQREVRVLNEAIGLRRAGREEPGQGPLAAESGRDD"
BASE COUNT          903 a         1859 c         1589 g          916 t
ORIGIN      
        1 caaaccgccc ggattgttgc gcagatccag aacgaagccc gtcaccttgt cgatgccgcc
       61 gacctccttg accgccttgt ccagttcggt tttcagcgta tcgtaggttt catcattgaa
      121 ggtcgagacg cgcaggatga ccgcatgccc ctcgacgcgg cttttcacca cggtcagctt
      181 gatcgtgtcg cgggtcatgg tcagatcgaa gggttccttt tcgccctcgc gcaggatggt
      241 gacggtgata tcgctgccga ccgggccacg catcatgtcc accgcctcgt ccagcgtcag
      301 ccccatcagc gattcgccgt tcacatgggt gatgaaatcg ccggtcttga cgcccgcttt
      361 cgccgccggc gtatcgtcga tgggcgagac gaccttgacc agaccgtcct cctggctgac
      421 ctcgatgcca aggccgccaa agctgccccg cgtctgggtc tgcatgtctt cgtaatcgtt
      481 ggccgcgaga aagctggaat gcggatccag cgatgtcagc atcccgttga tcgcggcctc
      541 gatcagcttc ttgtcatcgg gcgcctcgac ataatcggcg cggacccgtt cgaacacgtt
      601 gccgaacaat tccagctgtt catagaccga ggcgttcttt cccgcctcct gcgcgaccag
      661 cggcccggcg atctgcgtgg tcagaagcgc gccggcaagc acaccgccca cgccggaaat
      721 cagataatgt ttcatgacgg cctttcctgc ctcaatcctc ttgcggctcg acgatgggat
      781 tcagcacgaa ccaatccgcc gggtccagcg tttcctgttc cttgcgcaat tccagataca
      841 ggctttctgt ctggcctgca tccccgccgc gcgcggcatc ggcgacgaac tgcgcgccga
      901 attcctgttc cggggcctcc ttgcccccca tcaggccgac cggatcgccc gccttcagca
      961 catccccgat ttcgccgaag acctgcgcca tgcccgcaaa tatcagaaga tagccgcgcg
     1021 cgggctccag gatcatcaca ttgccgtaat ccagcagcgg cccgcgatag cggatcgtgg
     1081 ccggccacgg cgtcgtgacc agtgcggcgg gcgcggtcgc gatcacccag ccgggccgct
     1141 tgacaccggc cgcgtcggcc tcgccatagg ggcgcagcac gctgcccacc accggcagcg
     1201 gcagcgagcc ctgcgcaccc tcgaaatcct cgcgcggggc gcccacatcc atctcgatcc
     1261 cagccacccc ggcggcgaac tggtccagac tttcggccgc atcgcgcagt ttctgcaatt
     1321 cctcgggtgc ctcggcaaag cgaatcggca tggtcgaacg gtcggtaacg gccgaggcca
     1381 gcagtcgccg cgcctcctgc accgatgcca gtcccgatcc cagcatctcg gccgccgccg
     1441 attgcagcgc ccgcacggtc gagatttcat ccagatcggc cttcagccgc tctgcctcgg
     1501 atttcaggcc gggcgtcacg tccgacagga tcatccccga tcgcgcattg gccagcgcgc
     1561 ccgccggatg cagcagcatc gtcgcttcgg gcgattgctg caatgcggtc atcgcgccca
     1621 gaacgctggc cagacgatcg cgctgatcct cgaaccgcgc ccgcagctca ccctcgcggg
     1681 cactggcctg ccgcagaccc tcgcgcagcg cggcaagacc cagctcgtag ccgcgaatga
     1741 cctcggtcag cgcggtgacc tgatcatcgg cgctgaccgc ctcggccagc ttgccgatgg
     1801 ccgcccgcaa ctgcgccgcc gcgtccttgg catcggtgac cgcctcgctg gccggactcg
     1861 ctgccattgc cgatggcgcg aaaagcggcg ccaccggcag cagcgcgcca agcgcggaaa
     1921 tcaggatcag gcgcgcgatc atgctgtctc gatcaggctt tggccggtca tttcggccgg
     1981 ctggtccagg tccatcagtc gcaagacggt cggggcgaca tcggccagcc ggccgtcatg
     2041 cagcgtcgcg ccgtcagggc cgccatagac gatcaccggc accgggttgg tcgtatgggc
     2101 ggtatgaggt ccgccggttt cggggttgat catcgtctcg caattgccgt gatcggcgat
     2161 gatgacggcc gcgccgccgg cacgatccag cgcctgaagc atccgtccca gaccctcgtc
     2221 caccgcctcg caggcgcgaa tggcggcggg caggctgccg gtatggccga ccatgtcggg
     2281 attggcgaaa ttgaccacga tcaggtcata gccggcgccg attgcctcga ccagcttgtc
     2341 gctgacttcg gcggcggcca tttccggcgc cagatcatag gtcgcgacct tcgggctttg
     2401 cggcatgaag cgatcctcgc ccggttcggc cgcctccttg ccgccattga gaaaaaaggt
     2461 gacgtgggga tatttctcgg tctcggccag gcggaactgg cgcaaccccc ggccggcgac
     2521 ccaggcaccc agcgtgttga ccacctgccg cttgggatag gccgatgcca tccagtcatt
     2581 gtgccggtcg ctgtaatcga ccatgcccag cagcgccgcc cattgcggcc tgtcgccggt
     2641 atcgaattcc gcgaaatcgg gatcggccag ggccgacagg atctcgcgcg cgcggtcggc
     2701 gcggaaattg agacagaaga acccgtcgcc gtccatggcg ccgttatagc cgtcgatcac
     2761 gaagggcttg atgaattcgt cggtctcctc gcggccatag gcggcggcga cggcggcatc
     2821 ggcgctggcg gcagcctcgc cctcgcccgc catgatggcc cgaaaggccc gctcgacccg
     2881 gtcccagcgc ttgtcgcgat ccattgcgaa atatcgcccg atgacggtgc cgatgcggca
     2941 gccctcgggc agattgccct gcaggtcggt gacaaaaccc ttggccgatt gcggcggcac
     3001 gtcacgtcca tcggtaatcg catgaaccac caccggcacg ccggcctccg acaccgcctt
     3061 ggcggccgcc aggacatgcc ggatatgccc gtgtacgcca ccatccgaga cgacgcccat
     3121 cagatgcgcg ctgcctccgg tctccttcag tcgcgccacg aaaccgccaa gggtttcatt
     3181 gccaaagaag ctgccatcct cgatggccag gtcgatctgg cccagatcca tcgccacgac
     3241 ccggccggcg ccgatattgg tatggccaac ctcggaattg cccatctgac ccgagggaag
     3301 ccccacatca ggaccgaaag tggtcagcct cgcatgcggg caatgccgca tcaggcggtc
     3361 gaaatttggc gtccgcgcct ggtcgggcgc gctttgttcc ggccggtccg agatacccca
     3421 accgtcgagg atgcacagga tcacgggttt ggtcattcgc gcctcgcctt gtttgcgcct
     3481 ttgcgcccgt tgttacgccc gcacacgcga tgcgacaacc accgatccag gccccagccc
     3541 ccgaacgcgg cgatttgacc ggcgcagcca gatctgtcct tctcggttgc agaaataccc
     3601 tcggggggag tcccggaacg ggacgggggg gcagaccgcc ccccttttca cgcgcgatga
     3661 tagggagcac cggccaggat cgtcgcggcg cgatacagct gttcggccag catgacgcgg
     3721 accagaagat gcggccagac catgcggccg aagctgatct gccattcgga cctgccacgc
     3781 aaaccggatt ccagcccgcc cgcgccaccg atcacgaagc acagatcgcg tgcgccatcg
     3841 cgatatcccg cgatccgggc ggcgaaatcg ggcgatgtcg gctgatcgcc acgctcgtcc
     3901 agtgcgacca gcgcggcacc ctgcggaatg gctcgttcca gcaacagggc ctcggccgcc
     3961 atcccgccgc cgcggcggtc ctcgacctcg tgcatggtga cggccggaag gccaaggccg
     4021 cgaccggttt ttgcaaagcg atcgaggtaa tccgcgacca aagccgcctc gggggccttc
     4081 ttcagccgtc ccacggcgac aatgtcgatc cgcatcgcct cagggcgcgg gatgggcggg
     4141 ctggcggacg cggctcagcg cgtcggcggg catccacatc ttttccagct gatagaagtc
     4201 gcggacctcg ggccggaata catgcacgat cacgtcgtcg gtatcgacca gcacccaatc
     4261 gcccgcgtcc ttgccttcga tccgcgccga acgccccgta tccgccttga acttttcggc
     4321 cagatgttcg gcgatggcgc cgacttgccg cgcgctgcgg cccgacgcaa tgaccatgtg
     4381 gtccgcgatg gccgatctgc cgcgcaggtc gatcgtcacg atatcctcgg ccttgtcatc
     4441 ttccagcgag gacaggatgc ggttcagaag ctgatcgctg ctcagttctt catccgcggc
     4501 ggtcgcggcc ggcccggcag ccggcgagac gtcttgtgac agggttgtat cctccggtca
     4561 gcgcgccgat cacccccggc gcagaggtag tctgaagata gcatcttttt gccgcatctc
     4621 aatcgtcgcg gccggattcc gccgccagcg gaccctgtcc cggctcttcc cgccccgccc
     4681 ggcgcagtcc gatcgcctcg ttcagcacgc gaacctcgcg ctgcgggaag gggatggaga
     4741 tgccgttttc cacgaatccg tcccacaacg ccagatagac ctgaccgcgc acattggtca
     4801 ggcccgcctc ggcatcgccg atccagaagc gcagcacata atcgacagaa ctgtcgccaa
     4861 acccggtgac ccagcagacc ggacggcgct gcgccagaac ccgcttgacc gtcagtgcgg
     4921 cgttgatcgc gatttcgctg accttgtggg gatcgtcgcc gtaggacgtg ccgaagttca
     4981 ggtcgagcct cacgaaattg ttggtgtggg accagttcac cacctgcccg gtcaccagat
     5041 cctcgttcgg gatcagatat tccttgccgt cgcgcgtgac cacgctgaca tagcgcgcgc
     5101 ccagttcctc gatccagccg aaggtgtcgc ccaggctgat gacatcgccg ggcttgatcg
     5161 acttgtccag caggatgatc acacccgaga cgaggttcga cacgaccttt tgcagaccaa
     5221 aaccaaggcc cacaccgatc gcacccgaga gcaccgccag ccccgtc
//
LOCUS       DTVW01000910            2721 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2119011, whole
            genome shotgun sequence.
ACCESSION   DTVW01000910 DTVW01000000
VERSION     DTVW01000910.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2721)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2721)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2721
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2119011"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1057)
                     /locus_tag="EYO87_11840"
     CDS             complement(<1..1057)
                     /locus_tag="EYO87_11840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009506293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine deaminase"
                     /protein_id="HIC66667.1"
                     /translation="MDGLEQRIAQARGDEPADLVLRGGQVFDLVTGSMIDGDVAICGE
                     TIVGIGARYEARAVIDVTGLTLVPGFIDTHLHVESSLVTPFEFDRCVTPRGITTAICD
                     PHEIANVIGLDGIRYFQQASVHLLMDLRVQLSSCVPSTEMETSGARIEAADLAPLKGH
                     PSGIGLAEFMNYPGVIHRDPAAMDKLRLFAGGHVDGHCPQLSGRDLNAYIAAGIRTEH
                     EATTAEEALEKLRKGMRVLIREGSVSKDLEALQPVLTETTSAYLCLCTDDRNPLDIGE
                     HGHLDYMIRRLIQMGTSPLAAYRAASLSAAEAFGLKDRGLIAPGRRADIVALDSLEGC
                     HAALVLCGGRVVDDAAFA"
     gene            1187..1948
                     /locus_tag="EYO87_11845"
     CDS             1187..1948
                     /locus_tag="EYO87_11845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009604010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase"
                     /protein_id="HIC66668.1"
                     /translation="MTLTAGTFRDHFRAGGKAINGWCGIPSPVTAEIHAHAGYDLLTI
                     DMQHGLVGYADMLAMLQAMSASPAPKFVRIPWNEPGIAMKALDAGADGIICPMINSAD
                     EARALVRAARYAPLGARSYGPVRAGALHVDYVARSADLVQVFAMIETREALRNRHEIM
                     AVEGLSGIYVGPADMGLSLGYAPTLNPEAVEVLQAIGDVLAAARQAGLLAGVHCGDGA
                     MVRAMLGQGFDFASLATDTGLFTRALGAALAEARG"
     gene            complement(2042..2671)
                     /gene="hisH"
                     /locus_tag="EYO87_11850"
     CDS             complement(2042..2671)
                     /gene="hisH"
                     /locus_tag="EYO87_11850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008282581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HIC66669.1"
                     /translation="MTTALVDYDSGNLHSAEKAFQKMGRSVGAEIVVTSDPGIAARAD
                     RIVLPGDGAFPACRAALGEVDGMAEALREAVLNRGVPFIGICVGMQMLATTGYEYRPT
                     AGLDWIGGEVARIDAPGLKVPHMGWNDLVIDRPHPVLEGIGTGDHAYFVHSWQFRVAD
                     RAHLLAHVDYGGAVTAVVGRDNIVGTQFHPEKSQGVGLRLIANFLRWTP"
BASE COUNT          440 a          934 c          903 g          444 t
ORIGIN      
        1 cggcaaatgc cgcatcgtcc acgacccggc cgccacacag gaccagcgcc gcgtgacaac
       61 cttccagcga atccagcgcc acgatatcgg cccgccgccc cggcgcgatc agcccgcgat
      121 ccttcagccc gaaggcctcg gccgccgaca gcgaggccgc gcgataggcg gccagtggcg
      181 acgtgcccat ctggatcagc cgccggatca tgtagtccag gtgaccatgc tcaccgatat
      241 ccagcgggtt gcgatcgtcg gtgcacaggc acagataggc gctggtcgtc tcggtcagga
      301 ccggctgcag ggcttccaga tccttgctga ccgaaccctc gcggatcagc acgcgcatcc
      361 ccttgcgcag cttttccagc gcctcctcgg cggttgtcgc ctcgtgttcc gtgcggatgc
      421 cggcggcgat ataggcgttc agatcgcggc ccgaaagctg cgggcaatgg ccgtcgacat
      481 ggccgcccgc gaacaggcgc agcttgtcca tcgcggcagg gtcgcggtgg atcacgccgg
      541 gataattcat gaactcggcc agcccgatcc ccgagggatg tcccttcagc ggtgcaaggt
      601 cggcggcctc gatccgcgcg cccgaggtct ccatctcggt cgaaggcacg caggaggaca
      661 gttgcacccg cagatccatc agcagatgca cgctggcctg ctgaaaatag cggataccgt
      721 ccaggccgat cacgttggcg atctcgtgcg ggtcgcagat cgcggtggtg atgccgcgcg
      781 gtgtcacgca gcggtcgaac tcgaacggcg tgacaaggct ggattcgaca tgcagatggg
      841 tgtcgatgaa gcccggaacc agcgtcagcc cggtcacgtc gatcaccgcg cgcgcctcgt
      901 atcgcgcacc gatgcccacg atcgtttcgc cgcagatcgc cacgtcgccg tcgatcatgc
      961 tgccggtgac cagatcgaag acctgcccgc cgcgcaggac cagatcggcc ggttcatccc
     1021 cgcgcgcctg tgcgatccgc tgttccaacc cgtccatgcc gtcctccgtc gcgtccttgc
     1081 aggcggccac agaaccccat cgcccggcca aggtccagag ccggggccac ttgccgcgcg
     1141 ggccagcctg tgtttgcctt cactccggcg gatgaggaga ccacggatga ctttgacggc
     1201 agggactttc cgcgaccatt tcagggccgg cggcaaggca atcaacggct ggtgcggcat
     1261 cccgtcgccg gtcacggccg aaatccatgc gcatgcgggc tatgatctgc tgaccatcga
     1321 catgcaacac gggctggtcg gctatgccga catgctggcg atgttgcagg cgatgtctgc
     1381 cagcccggcg ccgaaattcg tgcgcatccc gtggaacgaa cccggcatcg cgatgaaggc
     1441 gctggatgcc ggggccgacg gaatcatctg cccgatgatc aacagcgccg acgaggcgcg
     1501 cgcgctggtc cgggccgcgc gctatgcgcc gctgggcgcg cgcagctacg ggccggtgcg
     1561 ggccggcgcc ctgcatgtcg actacgtcgc ccgctcggcc gatctggtgc aggtctttgc
     1621 catgatcgag acgcgcgagg cgctgcgaaa ccgtcacgag atcatggctg tcgaggggct
     1681 cagcggcatc tatgtcggcc ccgccgatat gggtttgtcg ctgggctacg cccccacgct
     1741 gaaccccgag gcggtcgagg tgctgcaggc aatcggcgat gttctggcgg cggcgcggca
     1801 ggcgggattg ctggccggcg tgcattgcgg cgatggcgcg atggtgcgtg cgatgctggg
     1861 acagggattc gattttgcct cgctggccac cgataccggg ctgttcacgc gcgcgctcgg
     1921 cgccgcgctg gccgaagcgc ggggataggg cgcggttttg cgccgccggc gcgcgggacg
     1981 cgcgcgcccc gcccagcggc agcgaccggg gcaggatctt cctgtcccgc ccccgtcatt
     2041 gtcagggggt ccagcgcagg aaattcgcga tcaggcgcag accgacgcct tgcgattttt
     2101 cgggatgaaa ctgcgtgccg acgatgttgt cgcggcccac caccgccgtg accgcgccgc
     2161 cgtaatcgac atgggccagc agatgcgccc gatccgctac ccggaactgc caggaatgga
     2221 cgaaataggc atgatcgccc gtgccgatac cttccaggac aggatggggg cggtcgatga
     2281 ccagatcgtt ccaacccata tgcggcacct tgaggcccgg cgcgtcgatc cgcgccactt
     2341 cgccgccgat ccagtccagc ccggccgtcg ggcggtattc gtatcccgtc gtcgccagca
     2401 tctgcattcc gacgcagatg ccgatgaaag gcacgccgcg attcaagacc gcctcgcgca
     2461 gggcctcggc cattccatcg acctcaccca gggccgcgcg gcaggcggga aaggcgccgt
     2521 cgcccggcag cacgatccgg tcggcgcgtg ccgcgatacc cggatcggac gtcaccacga
     2581 tctcggcccc gacgctccgg cccatcttct ggaacgcctt ttcggccgaa tgcaggttgc
     2641 cgctgtcgta atcgacaagt gccgtggtca taggctgcct ttggtcgacg ggatggcgtc
     2701 ggccttgcgc gggtcgatct c
//
LOCUS       DTVW01000911            1235 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2120033, whole
            genome shotgun sequence.
ACCESSION   DTVW01000911 DTVW01000000
VERSION     DTVW01000911.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1235)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1235)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1235
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2120033"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..465
                     /locus_tag="EYO87_11855"
     CDS             <1..465
                     /locus_tag="EYO87_11855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014285561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIC66670.1"
                     /translation="LMDEPFGALDPIIRARAQQDLRRIQQALGSTIMLVTHDMEEAIH
                     LGDRIAVMDKGRLVQHGTPAQIIRQPATDFVAEMVGGVERPLRLLSLIPVSDVVENGS
                     AEGEAVAVETSLRDALAICLWTGREALPVTRDGAGQQRVTLDAIRARAEGRT"
     gene            462..1196
                     /locus_tag="EYO87_11860"
     CDS             462..1196
                     /locus_tag="EYO87_11860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018304822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HIC66671.1"
                     /translation="MRWQNLLRGALIALLLALVLRPVWFTPVFAPFAPEGGPVIYDRS
                     SLLSLSLSHLGLVALASTAATLVSVMLAILVTRPAGAAFRPLSRTITNMGQTFPPVAV
                     LALAVPSLGFGAGPTVVALFLYGLLPIFENAMTGLLTLPPATMEAARGIGLNRRQRLV
                     RVELPLALPVILTGIRLSVVISLGTATIGSTVAARTLGEVIISGLLTNNTAYVLQGGL
                     IVGLFAVLIYDAMVQLETRLSRRRAR"
BASE COUNT          163 a          408 c          446 g          218 t
ORIGIN      
        1 ctgatggacg aacccttcgg ggcgctggat ccgatcatcc gggcgcgcgc gcagcaggat
       61 ctgcgccgca tccagcaggc cctgggatcg accatcatgc tggtcacgca tgacatggaa
      121 gaggcgatcc atctgggcga caggatcgcg gtgatggaca agggtcgtct ggtgcagcat
      181 ggaacgcccg cccagatcat ccggcagccg gcgacggatt tcgtggcgga aatggtcggc
      241 ggcgtcgaac gtccgctgcg cctgctgtcg ctgatcccgg tctccgatgt ggtcgagaac
      301 ggatccgccg agggcgaggc cgtggcggtg gagaccagcc tgcgcgacgc gctggcgatc
      361 tgcctgtgga ccggccgcga ggcgctgccg gtgacccgcg acggggccgg ccagcagagg
      421 gtcacactgg acgcgatccg tgcgcgggcc gaaggccgga catgaggtgg cagaacctct
      481 tgcggggggc gctgatcgcg ctgcttctgg ccctggtcct gcgtccggtc tggttcacgc
      541 cggtcttcgc gcccttcgcg cccgagggcg ggccggtcat ctacgatcgc tcgtcgctgc
      601 tgtcgctgtc gctgagccat ctgggcctcg tggcgctggc atccacggcg gcgacgctgg
      661 tttcggtgat gctggcgatc ctggtcacgc ggccggcggg ggcggccttc cgtcccctgt
      721 cgcgcaccat caccaacatg ggccagacat tcccgcccgt cgcggttctg gcgctggcgg
      781 tgccctcgct tggcttcggc gccgggccga cggtcgtggc gctgttcctt tatggcctgc
      841 tgccgatctt cgagaacgcc atgaccgggc ttctgaccct gccgcccgcc acgatggagg
      901 ccgcgcgcgg gatcggcctc aaccgccggc aacggctggt ccgggtggaa ttgccgctgg
      961 cgctgccggt catcctgacg ggcatccggc tgtcggtggt catctctctt ggcacggcca
     1021 cgatcggctc gaccgtcgcg gccaggaccc tgggcgaggt gatcatctcg gggctgctga
     1081 cgaacaacac cgcctatgtg ttgcagggcg ggctgatcgt ggggttgttc gcggtgctga
     1141 tctatgacgc gatggttcaa ctggaaaccc gcctgtcgcg gcgaagggcg cgataggcgg
     1201 gaccaccatc cgcatcgcca gcgccgggtc taccc
//
LOCUS       DTVW01000912            1537 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2122338, whole
            genome shotgun sequence.
ACCESSION   DTVW01000912 DTVW01000000
VERSION     DTVW01000912.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1537)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1537)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1537
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2122338"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..652
                     /locus_tag="EYO87_11865"
     CDS             <1..652
                     /locus_tag="EYO87_11865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013067806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="low specificity L-threonine aldolase"
                     /protein_id="HIC66672.1"
                     /translation="TGGRNAMVSITEATEWGAIYGPGEVAALARVAHEAGVPLHMDGA
                     RFANAVASLGCSAADLTWRAGVDVLCFGGTKNGAMAAEAVVFFDPALAEGFDYRRKQS
                     GHVFSKQRFLAAQMLALAEGGLWLDLAAQANARAARLSEAVLAAGGDLLAPVQTNAVF
                     ATLPAELHRRARAAGAIYHLWPDKSAEGLDPVPLRLVTAWNTPEAQIEEFAALIAG"
     gene            complement(660..1130)
                     /locus_tag="EYO87_11870"
     CDS             complement(660..1130)
                     /locus_tag="EYO87_11870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013961706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CinA family protein"
                     /protein_id="HIC66673.1"
                     /translation="MSLAGDVLAAARARRARIATAESCTGGLIAGALTEVAGSSDVVD
                     RGFVTYSNAAKQQMLGVGADTLQAQGAVSEAVAAQMALGALSRSEATLTIAVTGIAGP
                     GGSEYKPEGRVCFGIADAFGVRTETVEFGAIGRGQVRAATVDHALNLILARLRA"
     gene            complement(1127..>1537)
                     /locus_tag="EYO87_11875"
     CDS             complement(1127..>1537)
                     /locus_tag="EYO87_11875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008028769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylglycerophosphatase A"
                     /protein_id="HIC66674.1"
                     /translation="ALGLLIYRIGHFPLLAIATIAATALGFWAVPRYTAGMADPDRSE
                     IVIDEVAGQWLALCFPAAGFFFADLPRESFPYPGWVAAFLFFRLFDIWKPWLVGRADR
                     EGGVRGVMLDDLWAGLFAGIAIVIAAGIAHGLLI"
BASE COUNT          252 a          513 c          550 g          222 t
ORIGIN      
        1 gaccggcggg cgcaatgcga tggtctcgat caccgaagcg acggaatggg gcgcgatcta
       61 cgggcccggc gaggtcgcgg cgcttgcgcg ggtcgcacac gaggccggcg tgccgctgca
      121 catggacggc gcccggtttg ccaatgcggt ggcctcgctg ggctgttcgg cggccgatct
      181 gacatggcgg gcgggcgtcg atgtgctgtg tttcggcggc accaagaacg gggcgatggc
      241 ggccgaggcg gtggtgtttt tcgatccggc cctggccgag ggctttgatt atcgacgcaa
      301 gcaatcgggt catgtctttt ccaagcagcg gtttctggcc gcgcagatgc tggcgctggc
      361 agaaggcgga ctttggcttg atctggccgc gcaggcgaat gcgcgcgccg cgcgcctgtc
      421 cgaggccgtg ctggcggcgg gtggagatct gctggcgccg gtccagacca atgcggtttt
      481 cgcgacgctt ccggccgaac tgcacaggcg cgcacgggcg gccggcgcga tctaccacct
      541 gtggcccgac aaatcggccg aggggctgga tccggttcct ctgcggctgg tcacggcctg
      601 gaacacgccc gaggcccaga tcgaggaatt cgcggcgctg atcgcaggct gagacgcggt
      661 tatgcgcgca ggcgcgccag gatcaggttc agcgcgtgat cgaccgtcgc cgcgcggacc
      721 tgtccgcgcc cgatggcgcc gaactcgacc gtctcggtcc ggaccccgaa agcatcggcg
      781 atgccgaaac agacccggcc ctcgggcttg tattctgacc cgccggggcc ggcgataccc
      841 gtcaccgcga tggtcagcgt ggcctcggat cgcgacagcg cgcccagagc catctgggcc
      901 gcgaccgcct cgctgaccgc gccctgggct tgcagcgtat cggccccgac gcccagcatc
      961 tgctgcttgg cggcgttgga ataggtgaca aagccgcgat ccacgacatc cgaggatccc
     1021 gccacctcgg tcagcgcgcc ggcgatcagc ccgccggtgc agctttcggc ggtggcgatc
     1081 cttgcgcggc gggcgcgggc ggccgccaga acgtcgccgg caaggctcat atcagcaacc
     1141 catgcgcgat gcctgcggcg atgacgatgg cgatgccggc gaaaagcccc gcccagagat
     1201 catccagcat cacgccgcgc acgccgcctt cccggtcggc gcggccgacc agccagggct
     1261 tccagatgtc gaaaaggcgg aagaacagga acgccgccac ccagccggga tagggaaagc
     1321 tttcgcgcgg cagatcggcg aagaaaaagc ccgccgccgg aaagcacagc gccagccact
     1381 ggcccgcgac ctcgtcgatg acgatctcgc tgcggtccgg atcggccatg ccggctgtat
     1441 agcgcggcac cgcccagaag ccgagggcgg tcgcggcgat ggtcgcaatg gccagcagcg
     1501 gaaaatgccc gatccggtag atcagaaggc caagggc
//
LOCUS       DTVW01000913            1208 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2122529, whole
            genome shotgun sequence.
ACCESSION   DTVW01000913 DTVW01000000
VERSION     DTVW01000913.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1208)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1208)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1208
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2122529"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(124..996)
                     /locus_tag="EYO87_11880"
     CDS             complement(124..996)
                     /locus_tag="EYO87_11880"
                     /inference="COORDINATES: protein motif:HMM:PF14833.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HIC66675.1"
                     /translation="MTPPRCGVIGLGNMGCGIAANLDAARLLHAVWDTNASAHARFPG
                     AQSGIAAAAGCEIVLLAVPGSAQIAALFEAGLLDGPDGRVMIDLTTSDPGATKLLADR
                     AAVAGVEYLDAGMSGGAAGAATGRLTLMIGGAPTALARVRPVLDLIATQIFHLGPSGA
                     GHTMKLIHNMICHTIFLATSEGCRAAERAGIPLNRAVEVLNAGNARSFVSERRFPDHI
                     VSGGFDGRSEAGNLAKDLAMARTLFDDLEQPSAYVGLTADLLAQAGQEGLLGQDFTRL
                     YPAYDALVQCWRNG"
     gene            complement(993..>1208)
                     /locus_tag="EYO87_11885"
     CDS             complement(993..>1208)
                     /locus_tag="EYO87_11885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013165026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HIC66676.1"
                     /translation="GQMGPETLHFLESVLLDRPVMVQPDHARMVMETYRAADLSAEIG
                     APVDLPLSNSSIAQLADMAEADKRAAE"
BASE COUNT          201 a          403 c          406 g          198 t
ORIGIN      
        1 caggttcgtc agcagcaggc cgaacgctac aaggcgctgg tggattcgtt cggcggatag
       61 tagcaggacg ccttttgacg catgaccggc ggtcctggcg gggccgccgg tcttcccttg
      121 cgatcagccg tttctccagc attggaccag cgcgtcatag gctggataaa gccgggtgaa
      181 atcctgaccg agcagacctt cctgcccggc ttgtgccagc aggtccgcgg tcaggccgac
      241 ataggccgac ggttgttcca gatcgtcgaa aagcgtcctg gccatggcaa gatccttggc
      301 caggttgccc gcctccgagc gtccgtcgaa gccgccgctg acgatatggt cgggaaagcg
      361 ccgttcgctg acgaagctgc gggcattgcc ggcattcagc acctcgaccg cgcgattcag
      421 cggaatgccc gcacgttcgg cggcgcggca gccctcggac gtggccagaa agatggtgtg
      481 gcagatcatg ttgtggatga gcttcatcgt atgcccggcg cccgaggggc cgaggtgaaa
      541 gatctgcgtg gcgatcaggt cgaggaccgg gcggacgcgc gccagtgccg tgggcgcgcc
      601 gccgatcatc agcgtcagtc gccccgtcgc ggcaccagcg gcgccgccgc tcatgcccgc
      661 gtccagatac tcgaccccgg cgaccgcggc acggtccgcc agaagcttcg tggccccggg
      721 atccgaggtg gtcaggtcga tcatcacgcg cccgtccgga ccgtccagca gacccgcctc
      781 gaacaaggcc gcgatctggg cgctgccggg cactgccagc agaacgattt cgcagccggc
      841 cgccgccgcg attccggatt gcgcaccggg aaagcgcgca tgggcagagg cgttcgtatc
      901 ccagacggcg tgcaacagcc ttgccgcgtc gagattggct gcgatcccgc agcccatgtt
      961 gcccagaccg atgacgccgc atcgcggcgg ggtcattccg ccgcccgttt gtcggcttcg
     1021 gccatgtcgg caagttgcgc gatcgagctg ttcgacagcg gcagatcgac gggcgcgcca
     1081 atctcggccg acaggtctgc cgcgcgatag gtctccatga ccatgcgggc atggtccggc
     1141 tgaaccatca ccgggcggtc cagcagcacg ctttccagga aatgcagcgt ctcgggaccc
     1201 atctggcc
//
LOCUS       DTVW01000914            5346 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2122730, whole
            genome shotgun sequence.
ACCESSION   DTVW01000914 DTVW01000000
VERSION     DTVW01000914.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 5346)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5346)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5346
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2122730"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..701
                     /locus_tag="EYO87_11890"
     CDS             <1..701
                     /locus_tag="EYO87_11890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008837199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="M24 family metallopeptidase"
                     /protein_id="HIC66677.1"
                     /translation="KELEYMRKAARIVERMHRRIADKVEVGQRKCDLVAEIYDAGLRF
                     DEWSQHGGDYPAIVPLLPSGPDASAPHLTWDDQPMKQDEGTFFEIAGCYQRYHVPLSR
                     TIFLGKPPQDMLEAEKAVLEGMEAGLGAARAGNTCEDVANAFFTVLDRHGIVKDNRTG
                     YPIGLSYPPDWGERTMSLRRGDQTELKPGMTFHFMTGLWMEGWGYETTESIVITEREP
                     ELFCNIPRRMLVKS"
     gene            698..1687
                     /gene="doeB"
                     /locus_tag="EYO87_11895"
     CDS             698..1687
                     /gene="doeB"
                     /locus_tag="EYO87_11895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008203784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-alpha-acetyl diaminobutyric acid deacetylase
                     DoeB"
                     /protein_id="HIC66678.1"
                     /translation="MTANPIVPTIPLDRPGKHHGFLRLPYSRNDSAWGSVMIPITVIA
                     GGAGPTALLTGGNHGDEYEGPIALQALAWEIAPEDVTGRVIIVPYLNYPAFRAGTRVS
                     PIDQINMNRCFPGRPDGSVSQKIAHYFDSVLVPMADIVLDYHSGGKTLDFLPYAAAHY
                     LNDKDQQAKCVAAMQAFGAPYSMMMLEIDAVGMLDTAAESQGKVFVTTELGGGGTATA
                     ASAAIAIRGGRNLLRHAGILAGPVEAADDNVMLDMPGDDCFHFATLDGLLHPLADLGD
                     AVRAGQPIARIWPADRTGIEPVSVTANRDGIIAARHFPGLVQTGDCLAVIAVR"
     regulatory      1796..1925
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00050"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="FMN riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="flavin mononucleotide"
                     /db_xref="RFAM:RF00050"
     gene            2000..2473
                     /locus_tag="EYO87_11900"
     CDS             2000..2473
                     /locus_tag="EYO87_11900"
                     /EC_number="2.5.1.78"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018689490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6,7-dimethyl-8-ribityllumazine synthase"
                     /protein_id="HIC66679.1"
                     /translation="MTKTNPRIAFIKARWHAEIVDRAHDGFLAEAATLFPGARIDAFD
                     VPGAFEMPRLAKKLARTGRYDAVVAAALVVDGGIYRHDFVAGAVVTGLMNVGLETGIP
                     CFSVSLTPHHYQETAAHRAFFRDHFVRKGAEAAQAVQQVLALEADLAASDHSDAA"
     gene            complement(2455..4113)
                     /locus_tag="EYO87_11905"
     CDS             complement(2455..4113)
                     /locus_tag="EYO87_11905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018001177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate dehydrogenase/oxidase"
                     /protein_id="HIC66680.1"
                     /translation="MTDPHDIDVLILGAGINGAGLFRDLCEQGASCVIADKGDFGGGT
                     SAAPSRLIHGGIKYLETGELRLVAQSTYERNLLLRNAPHLVRPLPTVIPIFSWLRGIG
                     PALRTLLGSTTAPRGRGAVLIKIGLAIYDLYGRRARVMPRHQLWSRARALREIPPLTP
                     RIAAAGRYYDAMVTQPERLVWELLADGIRVNPAARALNYTTLQDTDGTTIRLTGPDGT
                     LALRPRIVVNAAGPWIDRVNAALGAPSRLIGGTRGSHLLLDHPDLLAALNGRMLYFEA
                     DDGRICLVFDYLGRALVGSTDLRADDPDTVACDEAEVDYLLGALRGLLPGLRFGREQI
                     VYAYSGIRPLPASDAAMPGLISRDHSAPVAEPQGPRVWPILSLVGGKWTTFRGFAEEV
                     ADEVLARLSMSRRIGTASLAIGGGRDFPADPEVWANAVAARTGCAPDRARDLLDRYGT
                     TAGPILAAEGPAPAMLADAAYSLAELDWLIRHERVRHLADLVMRRTAIAVTGRLTGRD
                     LDRIAGLCARALDWDDTRRRQEIADTRAMLTGRHRLRMDQAASE"
     gene            complement(4110..>5346)
                     /locus_tag="EYO87_11910"
     CDS             complement(4110..>5346)
                     /locus_tag="EYO87_11910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018001176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="carbohydrate kinase"
                     /protein_id="HIC66681.1"
                     /translation="GRPLAPGILSLDSRAGEIAARWQADGTAALALERTGQRPHASAP
                     SALLAWLRANEPDRFARIGHVLACKDWLRFCLTGGIATDLTEASTAFTDVATQDYADD
                     ILPIFGLEALSHALPPILAPDAVAGHVTPQAAALTGLVAGTPVAAGLHDVTASSLGAG
                     GYAEGVAAIVAGTYSINETVSRAARTGPGWFCRNGIAPGEWNAMAISPASASNYDWFL
                     DTFCAAERAAGGPDLHARIIPQIEAAMARPSTAIFHPYLFGAPQGAMASAGFFGLRGW
                     QDRGDMLRAVIEGITFNHRVHVDALREGFAIDRARLTGGISRSPVFAQLFADTLAMPV
                     STSDTEEAAAWGAALCAGSAAGLFESPRHDPRDPGALTRNFTPDATRSADLDRRYAVF
                     REIGRAMEPVWPSIEALGE"
BASE COUNT          898 a         1799 c         1822 g          827 t
ORIGIN      
        1 ccaaggaact ggaatacatg cgcaaggccg cccgcatcgt cgagcggatg caccgacgca
       61 tcgccgacaa ggtcgaggtc ggtcagcgca agtgcgatct ggtcgccgag atctatgacg
      121 ccggcctgcg ctttgacgaa tggtcccagc atggcggcga ttatccggcg atcgtgccgc
      181 tgctgccctc ggggccggat gcctcggcgc cgcatctgac ctgggacgac cagccgatga
      241 agcaggacga gggcacgttc ttcgaaatcg cgggctgcta tcagcgctat catgtgccgc
      301 tgtcgcgcac gatcttcctg ggcaagccgc cgcaggacat gctggaggcc gaaaaggcgg
      361 tgctggaagg gatggaggcg gggcttggcg ccgcccgcgc cggcaatacc tgcgaggatg
      421 tcgccaatgc cttcttcacg gtcctggacc gccacggcat cgtcaaggac aaccgcaccg
      481 gctatccgat cgggctgtcc tatccgcccg actggggcga gcgcaccatg tcgctgcgcc
      541 gcggcgacca gaccgagctg aaaccgggca tgaccttcca tttcatgacc ggcttgtgga
      601 tggagggctg gggttacgag accaccgaat ccatcgtcat caccgaacgc gagccggaac
      661 tgttctgcaa catcccgcgc cggatgctgg tgaagtcatg accgcgaacc cgatcgtgcc
      721 caccatcccg ctggaccggc cgggaaagca tcacggcttt ctgcgactgc cctattcgcg
      781 caacgacagc gcatggggca gcgtgatgat cccgatcacc gtgatcgcgg gcggcgcggg
      841 gccgaccgcg ctgctgaccg gcggcaatca cggcgacgaa tacgagggcc ccatcgccct
      901 gcaggccctg gcctgggaga tcgcgccaga ggatgtcacc gggcgcgtca tcatcgtgcc
      961 ctacctgaat tatccggcct tccgcgccgg aacccgggtc agcccgatcg accagatcaa
     1021 catgaaccgc tgttttccgg gtcgtcccga tggcagcgtc agccagaaga tcgcgcatta
     1081 tttcgacagc gttctggtgc ccatggccga catcgtgctg gattaccatt cgggcggcaa
     1141 gacgctggat ttcctgccct atgcggcggc gcattatctg aacgacaagg accagcaggc
     1201 gaaatgcgtg gcggcgatgc aggctttcgg cgcgccctat tcgatgatga tgctggaaat
     1261 cgacgcggtg gggatgcttg acacggccgc cgaaagtcag ggcaaggtct tcgtcaccac
     1321 cgaactgggc ggcggcggca cggccacggc ggcctcggcc gccatcgcca tccggggcgg
     1381 gcgcaacctg ctgcgccatg cgggcattct cgccgggccg gtcgaggcag cggacgacaa
     1441 cgtgatgctg gacatgccgg gcgatgattg ctttcacttt gccacgctcg acggcttgct
     1501 gcatccgctg gccgatctgg gcgatgcggt cagggccggc cagccgattg cccggatctg
     1561 gcccgccgac cggaccggga tcgagccggt ttcggtcacg gcaaaccgcg acggcatcat
     1621 cgcggcgcgg cattttccgg gcctcgtgca gaccggggat tgcctcgcgg tgatcgcggt
     1681 ccgctgacct gacgaagcgc agggaccggg ccgcgtcgct ggtgcaaggc ggtgtcgcgc
     1741 cctcgccgat tgtccgccgg ggcttggcgg cgcgccgacc tcatgctatc gcgattctcg
     1801 ttctcagggc ggggtgcaat tccccaccgg cggtgacagc ccgcgagcgc cttcctgtcg
     1861 gaagggtcag cagatccggt gaaattccgg ggccgacggt atagtccgga tggaagagaa
     1921 ccgaggccgc ccttgcctgg ggcggtcaag gatcgaagct ctggggcctg tgctgttgca
     1981 aaacggaagg ttccgaaaga tgaccaagac caatccccgc atcgccttca tcaaggcccg
     2041 ctggcacgcc gagatcgtgg accgtgccca tgacggtttt ctggccgagg cagccacgct
     2101 gtttcccggc gcgcggatcg acgccttcga cgttcccggc gccttcgaga tgccgcgtct
     2161 ggccaagaaa ctggcccgga ccgggcgcta tgatgccgtc gtggccgccg cccttgtcgt
     2221 cgatggcggc atctatcgtc acgatttcgt cgccggcgcg gtggtgaccg ggttgatgaa
     2281 tgtcgggctg gaaaccggca ttccctgctt ttcggtctcg ctgacgccgc atcattatca
     2341 ggaaaccgcc gcgcacaggg cgttcttccg cgatcacttc gtccgcaagg gcgccgaggc
     2401 agcccaggcg gtgcagcagg ttctggcgct ggaggcggat cttgccgcct cggatcactc
     2461 tgacgccgcc tgatccatcc gcaggcggtg ccgcccggtc agcatcgccc gcgtatccgc
     2521 gatttcctgc cggcggcggg tatcgtccca gtccagtgcc cgcgcgcaaa ggccggcgat
     2581 gcggtccaga tcgcggcccg tcaaccgccc cgtgaccgca atcgcggtgc gccgcatgac
     2641 aagatccgcc agatgccgca cccgttcatg tcggatcagc cagtccagtt cggccagcga
     2701 ataggcggca tccgccagca tcgcgggcgc cgggccctcg gccgccagga tcggcccggc
     2761 ggtggtgcca tagcggtcca gcaggtctcg cgcccggtcg ggggcacagc ctgtccgcgc
     2821 ggccacggcg ttggcccaaa cctccggatc ggccggaaaa tcgcggccgc cgccgatcgc
     2881 cagcgacgcc gtgccgatgc gccgggacat cgaaagccgc gccagaacct cgtccgcgac
     2941 ctcttcggca aagccccgga aggtcgtcca cttgccgccg accagcgaca ggatgggcca
     3001 gacgcgcggt ccctgcggct cggccacggg ggccgagtgg tcgcggctga tcaggcccgg
     3061 catggccgca tcgctggcgg gcagggggcg gatgccggaa taggcataga cgatctgttc
     3121 gcggccaaag cgcagccccg gcagcagccc gcgcagcgcc cccagcagat aatcgacctc
     3181 ggcctcgtcg caggcgaccg tgtcgggatc gtcggcgcgc aggtcggtcg atccgaccag
     3241 cgccctgccg agatagtcga agaccaggca gatgcggccg tcatcggcct cgaaatacag
     3301 catccgtccg ttcagcgccg ccagcaggtc gggatgatcc agcaggagat gcgatcctct
     3361 ggtaccaccg atcagccgcg atggcgcgcc aagcgccgca ttcacccggt cgatccaggg
     3421 cccggccgca ttgaccacga tccgcggccg cagcgcaagt gtgccgtccg ggccggtcag
     3481 ccgaatcgtg gttccatccg tatcctgcaa tgtcgtgtaa ttcagcgccc gggcggcagg
     3541 attgacgcgg atcccgtcgg ccagcaattc ccagaccagc ctttcgggtt gcgtcaccat
     3601 cgcgtcgtaa tagcggccgg cggcggcgat gcgcggtgtc agcggcggga tttcgcgcag
     3661 ggcgcgcgcc cgcgaccaca gctgatggcg cggcatgacg cgggcccgcc ggccatagag
     3721 atcatagatc gccagcccga tcttgatcag caccgcgccc cggccgcgcg gcgccgtggt
     3781 cgaacccagc agcgtccgca gcgccggccc gatgcccctg agccacgaga agatggggat
     3841 caccgtcggc agcggccgca ccagatgcgg cgcattacgc aaaagcaggt tccgttcata
     3901 ggtggattgc gccacaagcc gcaattcgcc ggtctccaga tacttgatcc cgccatggat
     3961 cagccgcgaa ggcgccgccg aggtgccgcc gccgaaatcg cccttgtcgg cgatcacgca
     4021 gcttgcgccc tgttcgcaca gatcgcgaaa caggcccgcc ccgttgattc ccgcgcccag
     4081 gatcagcaca tcgatgtcgt gcggatctgt cattcgccca gggcctcgat actgggccag
     4141 accggttcca tcgcccgccc gatctcgcga aagacggcat agcggcggtc aagatcggcg
     4201 ctgcgggtgg catcgggggt gaaattccgg gtcagggcgc ccggatcgcg cggatcgtgg
     4261 cgcgggcttt cgaacaggcc cgccgccgat cccgcacaca gggccgcgcc ccaggcggcg
     4321 gcctcttcgg tgtcgcttgt gctgacgggc atggccaggg tatcggcgaa aagctgggca
     4381 aaaacagggc tgcgcgagat gcccccggtc agccgcgccc ggtcgatggc aaagccttcg
     4441 cgcagggcat cgacatggac gcggtgattg aaggtgatcc cctcgatcac ggcgcgcagc
     4501 atgtcgccgc gatcctgcca tccgcgcagg ccgaaaaagc cggcgctggc catcgcgccc
     4561 tgcggtgcgc cgaacaggta ggggtgaaag atggcggtcg aggggcgggc catcgcggcc
     4621 tcgatctggg gaatgatccg ggcgtgcaga tccgggccgc cagcggcacg ttcggcggcg
     4681 cagaatgtat cgaggaacca gtcgtaattg ctggcggagg caggagaaat cgccatcgca
     4741 ttccattcgc ccggcgcgat gccgttgcgg cagaaccagc ccgggccggt ccgagccgcg
     4801 cgcgagacgg tttcgttgat ggaataggtt ccggcgacga tggccgcgac accctcggca
     4861 tagccacccg cacccagcga ggatgccgtc acatcatgca gtccggccgc gaccggcgtg
     4921 ccggcgacca ggccggtcag ggcggcggcc tggggcgtga catggcctgc gacggcatcg
     4981 ggggccagga tcgggggcag ggcatgggac aatgcctcga gcccgaagat cggcaggatg
     5041 tcatcggcat aatcctgtgt cgcgacatcg gtaaaggcgg tgctggcctc ggtcaggtcg
     5101 gtggcgatgc cgccggtcag gcagaaccgc agccagtcct tgcaggccag cacatgcccg
     5161 atccttgcga agcggtcggg ttcgttggcg cgcagccagg ccaacagtgc cgaaggcgcc
     5221 gaggcatgag gtcgctggcc ggtccgttcc agggcaagag cggcggtgcc gtcggcctgc
     5281 caccgcgccg cgatttcgcc cgcgcggctg tccaaagaca ggatgcccgg cgccagcggc
     5341 cggccc
//
LOCUS       DTVW01000915            1032 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2123370, whole
            genome shotgun sequence.
ACCESSION   DTVW01000915 DTVW01000000
VERSION     DTVW01000915.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1032)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1032)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1032
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2123370"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..264)
                     /locus_tag="EYO87_11915"
     CDS             complement(<1..264)
                     /locus_tag="EYO87_11915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66682.1"
                     /translation="MNSETRLSARPLGADAASEADGVGGEGRDLPQSRGFFGRFFDAL
                     TGSEEDEAGDEGDRPVAQPAPGMVNLRRMRVDDVAIPKAEIIAA"
     gene            complement(261..785)
                     /gene="ybeY"
                     /locus_tag="EYO87_11920"
     CDS             complement(261..785)
                     /gene="ybeY"
                     /locus_tag="EYO87_11920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007120803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA maturation RNase YbeY"
                     /protein_id="HIC66683.1"
                     /translation="MCPDVPCDEMPDEIATDCVIEDERWEEAGLDDLADRAVAATLTW
                     HGIGGEVVVMGCDDDRIAALNADFRGKPRATNVLSWPSVEHAPHQPGARPVLPAVDEW
                     GDIAIAFDTCAAEARAQTKPLADHVTHLLVHATLHLLGYDHQNDADAETMEASERSIL
                     SILNIPDPYQEKVS"
     gene            complement(751..>1032)
                     /locus_tag="EYO87_11925"
     CDS             complement(751..>1032)
                     /locus_tag="EYO87_11925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010396135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate starvation-inducible protein PhoH"
                     /protein_id="HIC66684.1"
                     /translation="RLGEGSRMVITGDRTQIDLPRGTQSGLVDAERVLDGVKGISFSY
                     FTAKDVVRHPLVARIINAYDAEDAAAIARGETEEPRGSYVPRRAMRRDA"
BASE COUNT          158 a          350 c          339 g          185 t
ORIGIN      
        1 cgccgcgatg atctcggcct tggggatggc cacgtcatcg acgcgcatcc gccgcagatt
       61 gaccatgccg ggcgcgggct gggccaccgg tcggtcgcct tcatcgcccg cctcgtcctc
      121 ttccgatccc gtcagcgcgt cgaagaaccg cccgaagaag ccgcgcgact gcggcaggtc
      181 gcgcccctcg ccgccgacgc catccgcctc ggaggcggcg tcggccccaa gcgggcgggc
      241 ggataatcgc gtttcggagt tcatgacact ttctcttgat aaggatcggg aatgttcaga
      301 attgacagga tcgaacgttc ggacgcttcc atggtttccg cgtcggcatc gttctggtga
      361 tcatagccca gaaggtgcaa cgtcgcatga accagcagat gggtgacgtg atcggccagc
      421 ggcttggtct gcgcgcgcgc ctcggcggca caggtgtcga aggcgatggc gatatcgccc
      481 cattcgtcga ccgcgggcag gacggggcgc gcgccgggtt ggtgcggggc gtgttcgaca
      541 gatggccagg acaggacgtt ggtggcgcgc ggcttgcccc ggaaatcggc attcagcgcg
      601 gcgatgcggt catcgtcgca ccccatcacc acgacctcgc cgccgatccc gtgccaggtc
      661 agcgtcgccg cgacggcgcg gtcggccagg tcatccagcc cggcctcttc ccatcgctca
      721 tcctcgatga cgcagtcggt tgctatctcg tcaggcatct cgtcgcatgg cacgtcgggg
      781 cacatagctg ccgcgcggct cctctgtttc gccacgggcg atggctgccg cgtcctcggc
      841 gtcataggcg ttgatgatcc gcgcgacaag cggatgtcgc acgacatcct tggcggtgaa
      901 atagctgaag ctgatcccct tcacgccgtc cagaacccgt tccgcatcga ccagccccga
      961 ttgcgtgccg cgcggcaggt cgatctgggt gcgatcaccg gtgatgacca tgcgcgatcc
     1021 ctcgcccagg cg
//
LOCUS       DTVW01000916            2266 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2124561, whole
            genome shotgun sequence.
ACCESSION   DTVW01000916 DTVW01000000
VERSION     DTVW01000916.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2266)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2266)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2266
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2124561"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..563
                     /gene="hemC"
                     /locus_tag="EYO87_11930"
     CDS             <1..563
                     /gene="hemC"
                     /locus_tag="EYO87_11930"
                     /EC_number="2.5.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009825369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hydroxymethylbilane synthase"
                     /protein_id="HIC66685.1"
                     /translation="QGAVVGSSSLRRRAQLAHRRPDLHLVEFRGNVQTRLRKLEEGVA
                     VATFLAMAGLRRLDMLHVARGPIDPAEMLPAVAQGAIGVERRAGDDATATLLRAIHDV
                     ETGQRIAAERAFLARLDGSCQTPIAGLAELSGSRLTLRGEILRPDGAEAFSGSRKGEI
                     PDGPAMGADLAEELLSRAGRGFLEHL"
     gene            complement(712..1425)
                     /gene="lexA"
                     /locus_tag="EYO87_11935"
     CDS             complement(712..1425)
                     /gene="lexA"
                     /locus_tag="EYO87_11935"
                     /EC_number="3.4.21.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor LexA"
                     /protein_id="HIC66686.1"
                     /translation="MLTRKQIQLLEFIQKRMARDGVPPSFDEMKDALDLRSKSGIHRL
                     VTALEERGFIRRLPHRARALEILRLPDALAGTDGDTPKAAAGFSPRVISNDRPGRPRG
                     AMDIVDSAAVALPLMGRIAAGVPIEAISEISHHVSVPGTMLTGRDHHYALEVKGDSMI
                     EAGINDGDVVVIREQDSAENGDIIVALVEGHEATLKRYRRRGAMIALEAANPAYETRI
                     LPEESVRVQGRLVGLIRSY"
     gene            complement(1525..>2266)
                     /locus_tag="EYO87_11940"
     CDS             complement(1525..>2266)
                     /locus_tag="EYO87_11940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010392709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="molybdopterin molybdotransferase MoeA"
                     /protein_id="HIC66687.1"
                     /translation="AADIGLLAAMNVPQVVVADQPRVAILAGGDELVRPGQMPQPGQI
                     VSSNDLAIAALAAEAGAVPRILPIARDSEASLRDSLASAADADLIVTIGGASVGDHDL
                     VGKVAADLGMDRAFYKIAMRPGKPLMAGTISRSAMLGLPGNPVSAIVCGILFMQPLIL
                     RMQGLDAGHRIGRARLARDLAPEGDRQHYLRAGLEDGPDLPLINPFRDQDSARLSLMA
                     QADALLVRPAGDPARRAGDVVCFLPLRR"
BASE COUNT          381 a          751 c          769 g          365 t
ORIGIN      
        1 cgcagggcgc ggtggtcggt tcttccagcc tgcgccggcg ggcgcagttg gcgcatcggc
       61 gacccgatct gcatctggtc gagtttcgcg gcaacgtcca gacccggctg cggaagctgg
      121 aagagggcgt ggcggttgcg acctttctcg ccatggccgg cttgcgacgg ctggacatgc
      181 tgcatgtggc gcgcgggccg atcgatccgg ccgaaatgct tcccgcggtg gcgcagggcg
      241 ccatcggcgt cgagcgccgg gccggcgatg acgcgaccgc gacactcctg cgtgccatcc
      301 atgatgtcga aaccggtcag cgcatcgctg ccgaacgcgc cttcctcgcg cgcctggacg
      361 gatcctgcca gacgccgatc gcaggtctgg ccgagctgag cggatcgcga ctgaccctgc
      421 gcggagaaat cctgcgcccg gacggcgccg aggcgttcag cggcagccgt aaaggcgaaa
      481 ttcccgacgg cccggcgatg ggggccgacc tggccgagga attgctgtcg cgtgccggcc
      541 ggggctttct ggaacatctg tgagcggcag aggccatgcc gcaaggccgg gacagccagc
      601 ctgaggacac gaacccaccc ggcagtcagc ttgtgacagg ccagaccgat gagagcggtc
      661 gcaatgcggc ccttcgcggg cgatcagcca agggtgccgc gccgcgatcc ctcaatagct
      721 gcggatcagg ccgacgaggc ggccctgcac gcggacactt tcctcgggca ggatgcgggt
      781 ttcgtaggca gggtttgccg cctccagcgc gatcatcgcg ccgcgccggc gatagcgttt
      841 cagcgtcgcc tcatggcctt cgaccagggc gacgatgatg tcaccgttct ctgcgctgtc
      901 ctgttcgcga atcaccacga cgtcgccgtc gttgatcccc gcctcgatca tcgaatcgcc
      961 cttgacctcc agtgcgtaat gatggtcgcg acccgtcagc atcgtgccgg gcaccgagac
     1021 atggtgcgaa atttcggaaa tcgcctcgat cgggacgccc gccgcgatcc ggcccatcag
     1081 cggcaatgcg acggccgcgc tgtccacgat gtccatcgcg ccgcgcggac ggcccggacg
     1141 atcattcgag atgacgcggg gcgagaatcc ggccgcagct ttcggggtgt ccccgtccgt
     1201 ccccgccagc gcatccggca ggcgcaggat ttccagcgcg cgggcacgat ggggaagacg
     1261 ccggatgaag ccacgttcct caagcgccgt caccagccgg tggatgccgg attttgagcg
     1321 cagatccagc gcatccttca tctcgtcgaa agagggcggg acaccgtcgc gcgccatgcg
     1381 cttctgaatg aattccagca gctggatttg tttcctggtc agcatcggcc cgtccttgcc
     1441 ccgaagtgtt ccgcgaatgt tctagccgat cggccgaatc gcgtcaacaa tctgcgcgca
     1501 tcgtgatgaa aaatcggtta aggctcagcg gcgaagcggc agaaagcaga ccacgtcgcc
     1561 ggccctgcgg gcggggtcgc cggcgggcct gaccagcagg gcgtcagcct gcgccatcag
     1621 cgacaggcgg gcggaatcct ggtcgcggaa cggattgatc agcggcaggt caggcccgtc
     1681 ttcaaggccg gcccgcaggt aatgctggcg atcgccctcg ggggccagat cgcgggcaag
     1741 acgggcgcgt ccgatgcggt gtcccgcatc cagcccctgc atccgaagga tcagaggttg
     1801 catgaacaaa attccgcaaa caattgcaga aacaggattt cctggtagtc caagcatggc
     1861 ggaccggctg attgttccgg ccatcagcgg ttttccgggc cgcatcgcga tcttgtagaa
     1921 ggcgcggtcc atgcccaggt cggccgcgac cttgccgacc agatcatgat ctccgaccga
     1981 ggcgccgccg atggtgacga tcagatcggc atccgcggcc gaggccaggc tgtcgcgcag
     2041 gctggcctcg ctgtctcgcg cgatgggcag gatccgcggc acggcgcctg cctcggcggc
     2101 cagcgcggcg atggcgagat cgttggaact gacgatctgg ccgggctgcg gcatctgacc
     2161 cggccggacc agttcgtcgc cgcccgcgag aatcgcgacg cggggctggt ctgcgacgac
     2221 cacctgcgga acattcatcg ctgccagcaa gccgatatcg gccgcc
//
LOCUS       DTVW01000917            1960 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2124626, whole
            genome shotgun sequence.
ACCESSION   DTVW01000917 DTVW01000000
VERSION     DTVW01000917.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1960)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1960)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1960
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2124626"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..408
                     /locus_tag="EYO87_11945"
     CDS             <1..408
                     /locus_tag="EYO87_11945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_353514.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufB"
                     /protein_id="HIC66688.1"
                     /translation="MIHLGKNTRSRIVSKGISAGQAQNTYRGLVSMHPRATNSRNYTQ
                     CDSLLIGDKCGAHTVPYIEVKNTSSRVEHEATTSKVDDDQLFYCRSRGMDEEEAVALV
                     VNGFCREVLQALPMEFAMEAQSLVAISLEGSVG"
     gene            478..1233
                     /gene="sufC"
                     /locus_tag="EYO87_11950"
     CDS             478..1233
                     /gene="sufC"
                     /locus_tag="EYO87_11950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011750200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly ATPase SufC"
                     /protein_id="HIC66689.1"
                     /translation="MLKIDNLHVKLEEEDKQILKGLSLEVPAGQVHAIMGPNGSGKST
                     LSYVLSGRDGYEVTDGSASLDGADLLDMEPEERAAAGLFLAFQYPVEIPGVGNMTFLR
                     TAVNAQRKARGEEEMTSGEFLKAIREKARELQIDAEMLKRPVNVGFSGGEKKRNEILQ
                     MAMLAPRMCIMDETDSGLDVDAMRLVADGVNALRSPDRSFLVITHYQRLLNHIQPDMV
                     HIMSNGRIVKSGGPDLALQVEEDGYGDLLAEAG"
     gene            1575..1811
                     /locus_tag="EYO87_11955"
                     /pseudo
     CDS             1575..1811
                     /locus_tag="EYO87_11955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010414918.1"
                     /note="iron storage protein; incomplete; partial in the
                     middle of a contig; missing N-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin"
     gene            complement(1829..>1960)
                     /locus_tag="EYO87_11960"
     CDS             complement(1829..>1960)
                     /locus_tag="EYO87_11960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010235384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2721 domain-containing protein"
                     /protein_id="HIC66690.1"
                     /translation="LVLFLLETRLATGSAKDRRRRSREIMRRKAERAAEDDNSGASL"
BASE COUNT          379 a          579 c          661 g          341 t
ORIGIN      
        1 atgatccatc ttggcaagaa cacccgctca cgcattgttt cgaaagggat ttcagccggt
       61 caggcgcaga atacctatcg cggcctggtg tcgatgcacc cgcgcgccac caacagccgc
      121 aattacaccc agtgtgacag cctgctgatc ggcgacaaat gcggcgccca taccgtgccc
      181 tatatcgagg tcaagaacac ttcgtcccgc gtcgaacatg aggcgacgac cagcaaggtc
      241 gatgacgatc agctgttcta ttgccggtcg cgcgggatgg acgaggaaga ggcggtcgcg
      301 ctggtcgtga acggtttctg ccgcgaggtg ttgcaggccc tgccgatgga attcgccatg
      361 gaagcgcagt cgctggtcgc gatctcgctt gagggctcgg tcggctagtc cgccgcctac
      421 aggaatatga cgatggtgcc ggctgcggca ccgcagccac cgtctgatga ggaaaaaatg
      481 ctgaagatcg ataacttgca cgtcaaactt gaagaagagg acaagcagat cctgaagggt
      541 ctgagcctcg aggttccggc cggtcaggtc catgcgatca tggggccgaa cgggtcgggc
      601 aaatcgacgc tgtcctatgt cctgtcgggc cgcgacggct acgaggtgac ggacggctcg
      661 gccagcctcg acggcgccga tctgctggac atggagcccg aggagcgcgc cgccgccggc
      721 ctgttcctgg cgtttcaata tcccgtggaa attccgggcg tcggcaacat gaccttcctg
      781 cgcaccgccg tgaacgcgca gcgcaaggcg cgcggcgagg aggaaatgac ttcgggcgaa
      841 ttcctcaagg ccatccgcga gaaggccagg gaattgcaga tcgacgccga gatgctgaaa
      901 cgcccggtga atgtgggttt ttccggcggc gagaagaagc gcaacgagat cctgcagatg
      961 gcgatgctgg cgccgcgcat gtgcatcatg gacgagacgg attccggcct tgacgtggat
     1021 gcgatgcggc tggtcgcgga cggcgtgaat gccttgcgca gccccgaccg cagctttctg
     1081 gtcatcactc actaccaacg cctgctgaat cacatccagc ccgacatggt tcatatcatg
     1141 tcgaatggtc gcatcgtgaa aagtggtggt cctgatctgg ccttgcaggt cgaggaagat
     1201 ggctatggcg accttctggc ggaggccggc tgatggctga cgtggcggtc aagaccaagg
     1261 aggtgacgcc gcaggtcagc ggcgcgccga aggccgagga tgcgttgcag gcgcggctgg
     1321 cggcgctgga tctgcccgcg ggcggcttta ccgcggctgc gcgccgggat gcgctggcgc
     1381 ggttgcgcgc catgggtctg cccggcccgc gcgatgaata ttggcgctat accgatccgg
     1441 ccacgttcag tgcggcgaag gccggggcga tcgggatgga agcggacgaa ggaccggacg
     1501 gacccttgtt cgacgatctg gaccggttga agatcgtttt cgtggacggg atctttgacg
     1561 ccgatgcctc ggacgatctg gcgctcgaga tggaagcgat accgttgctg cgcgatgccg
     1621 cagaatacgc caagagcgtg aaggactaca cgtccgaaca gctgttcgag aacatcctcg
     1681 cgagcgagga agagcacgtc gacttcctcg aaacccagtt cgacatgatc gagcgcatgg
     1741 gtctgcagaa ctacgtccag ctgcaaagcc accccgccgg cgagggcgag acgggcgcgg
     1801 gcgcgcccta agcctctgcg cggggcggct agagcgacgc gccggagtta tcgtcctccg
     1861 ccgcgcgctc tgccttgcgg cgcatgattt cgcgactgcg acggcggcga tctttcgcgc
     1921 tgcccgtcgc cagtcgcgtt tccagcagga acagcaccag
//
LOCUS       DTVW01000918            1443 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2124664, whole
            genome shotgun sequence.
ACCESSION   DTVW01000918 DTVW01000000
VERSION     DTVW01000918.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1443)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1443)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1443
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2124664"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(1..1443)
                     /locus_tag="EYO87_11965"
                     /pseudo
     CDS             complement(1..1443)
                     /locus_tag="EYO87_11965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_351756.1"
                     /note="internal stop; incomplete; missing N-terminus and
                     C-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
BASE COUNT          232 a          485 c          424 g          302 t
ORIGIN      
        1 atgatctcga tcttctgcag catctggcga acgatcacct cgatatgctt gtcgttgatc
       61 ttcacacctt gcaggcgata gacgtcctgc acctcgtcga tcaggtagtc ggccagcgcc
      121 tcgatcccca tgatccgcag gatatcgtgc ggcgcggggt tcccgtccat gatgtagtca
      181 cccttctgca cgaagtcgcc ctcctgcacc gggatgtgct tgcccttggg caccatgtat
      241 tcgacgggcg cctgatcctc gttcgagggc tcgatggaga tgcgtcgctt gttcttgtag
      301 tccttgccga accgcacatg accgtcgatt tccgcgatga tcgcgtgatc cttgggccga
      361 cgagcctcga acaattccgc gacgcgggga agacccccgg tgatgtcctt ggttctggca
      421 ccttcgcgcg ggatccgggc gacgacatca cccggacgga tttcctgccc gtcctcgacc
      481 gacaggatcg catccaccga catcggatag gtgacggggt tgccctgttc gttgcgcaca
      541 ggctctccgc cctcgccgac gatcaggatt tccggcttca gatcgttgcc tttcggcgca
      601 ctgcgccaat cggtcacgat cttctgcgtc atcccggtcg catcgtccgt ctcgtcacgc
      661 accgaaaggc cggtcgtcag atcgacgaac ttcgcgacac cgcccttttc ggcgatgatc
      721 ggcagggtgt agggatccca ttcgtacagc ttggcgccgc ggatcacccg gtcgccttcc
      781 ttcacgaaca gcttggagcc atagaacagc ttgtggctgg cccgttcctg cccctgatcg
      841 tccatgatca gcagttgcat gttgcgcgac atgaccacca tttcgccact ggcgttggtc
      901 agcgtgcttt cgttgcggaa ctgcacgctg ccctcgtgcg aggccgcctg gaaggattgc
      961 tggccaccct gcgcgatacc gccgatgtgg aaggtccgca tcgtcagctg ggtgcccggc
     1021 tcgccgatcg actgggctgc gatgatgccc accgcctcgc cgatattgac cagcgtgccg
     1081 cgcgccagat cccgaccata gcacagcgct cagaccccgt cctcggattc gcaggtcagc
     1141 gcggaccgga tgcggaccga ttgcacgccc gcctgctcga tggcgtcggc cttgcgttcg
     1201 tcgatcagct cgccaccgcg gatgatgatc tcgtcgccgc ccggaaccag aacatcctcg
     1261 gccgcggtgc gccccagaat gcgttcggac agcggcgcga tgacctcgcc gtcattgacg
     1321 gcggccgagg cggtgatggc ctgttcggtg ccgcaatcat gatcgcggat gatgcaatcc
     1381 tgcgccacgt cgacgagacg acgggtcaga tagcccgagt tcgccgtctt caacgccgta
     1441 tcc
//
LOCUS       DTVW01000919            2155 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2127854, whole
            genome shotgun sequence.
ACCESSION   DTVW01000919 DTVW01000000
VERSION     DTVW01000919.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2155)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2155)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2155
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2127854"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..2126)
                     /gene="ligA"
                     /locus_tag="EYO87_11970"
     CDS             complement(<1..2126)
                     /gene="ligA"
                     /locus_tag="EYO87_11970"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007254145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HIC66691.1"
                     /translation="MVELDQQQAADEIADLSARIARANEDYHTRDAPRISDADYDSLK
                     QRLAALEQAFPDLAHPDSPTGKVGAKPAEGFGKVVHAQRMMSLANAFSRAEVADFVAR
                     IRGFLNLSEEAPLKIAAEPKIDGLSLSLRYERGRLVQAATRGDGAVGENVTANARTIS
                     DIPTILKGAPEILEVRGEVYMSHADFARLNAQDGGRVFANPRNAAAGSLRQIDPAVTA
                     SRPLRYFAYGWGAVSAPLADSQMDAVGRLAGLGFQTNPLMTLCDDLESMIAVWSRIEQ
                     QRATLGYDIDGVVYKVNDLAYQARLGFRSTTPRWALAHKFPAETAWTRLDRIEIQVGR
                     TGALSPVARLEPVTVGGVVVSNATLHNEDYIAGRDSSGAPIREGRDIREGDWVKVYRA
                     GDVIPKIADVDLSRRPKGSAPYEFPSLCPECGSDAIREPGDSVRRCTGGLICPAQAVE
                     KLKHFVGRAAFDIDGLGAKQIEMFFADDALPIREPADIFTLAARDARNLSKLKNREGF
                     GDRSVEKLFAAIEDRRDIALKRLIFALGVRHVGEVASATLARHFGTWGRLVSAIDGAA
                     QEPAFAAPDDKARKAAMDRSPNWAELTGIDGIGSVLVQSLVTTFRQDAERASINRLIA
                     QLKVKPDDTEVDEGSPVSGKTLVFTGTLERMTRAEAKARAEAMGAKVAGSVSARTDLL
                     IAGPGAGSKATKAAELGVKVIDEDEWL"
BASE COUNT          356 a          724 c          690 g          385 t
ORIGIN      
        1 agccattcat cctcgtcgat gaccttcacg cccagttcgg cggcttttgt tgccttggag
       61 cccgcaccgg gaccggcaat cagcagatcg gtcctggcgc tgaccgagcc tgcgaccttg
      121 gcgcccatcg cctcggcccg ggccttggcc tcggcgcgtg tcatccgttc cagcgtgccg
      181 gtgaagacca gggtcttgcc gctgaccgga ctgccttcgt cgacttccgt atcgtcgggc
      241 ttcaccttca gttgcgcgat caaccggttg atgctcgcgc gttcggcgtc ctgccggaag
      301 gtcgtgacca gcgattgcac cagaaccgac cctatgccgt cgatgccggt cagttctgcc
      361 cagttgggac tgcggtccat cgccgccttg cgggccttgt catcgggggc cgcgaaggcg
      421 ggttcctgcg ccgcgccgtc gatcgccgaa accagccggc cccaggtgcc gaaatggcgc
      481 gcaagcgtgg ccgaggcgac ctcgcccaca tgccggacgc caagagcgaa tataagcctt
      541 ttcaatgcga tgtcgcgacg atcctcgata gcggcgaaca gcttttcgac cgatctgtcg
      601 ccaaaccctt cgcggttctt cagcttcgac aggttccggg cgtcgcgggc ggccagggta
      661 aagatatcgg cgggttcgcg gatcggcagg gcatcatcgg cgaagaacat ctcgatctgt
      721 ttggcgccca gcccgtcgat gtcgaaggcg gcgcggccga cgaaatgttt cagcttctcg
      781 accgcctggg ccgggcagat cagtccgccc gtgcagcggc gcaccgaatc gcccggctcg
      841 cggatcgcat ccgatccgca ttccgggcaa agcgacggaa attcataggg cgcgctgccc
      901 ttgggccggc gcgacagatc cacatcggcg atcttcggaa tcacgtcgcc cgcgcgatag
      961 accttgaccc aatcgccctc gcgaatgtcg cgcccctcgc ggatcggcgc gccgctgctg
     1021 tcgcgcccgg cgatgtaatc ctcgttgtgc agggtcgcgt tcgagacgac gaccccgccg
     1081 accgtcaccg gctcgagccg cgcgacgggg gacagggcgc cggtgcggcc gacctgaatc
     1141 tcgatgcgat caaggcgagt ccaggcggtt tcggcaggga atttgtgcgc cagagcccat
     1201 cgcggcgtgg tcgaacgaaa acccagccgg gcctgatagg ccaggtcgtt caccttgtag
     1261 accaccccat cgatgtcata tcccagtgtc gcgcgctgtt gttcgatccg cgaccagacg
     1321 gcgatcatgg actcgagatc gtcgcacagc gtcatcagcg ggttggtctg aaagcccagt
     1381 cccgccagcc ggcccaccgc atccatctgg ctgtcggcca gaggcgccga gaccgcgccc
     1441 cagccatagg caaagtagcg cagcggtcgc gacgctgtca cagccggatc gatctggcgc
     1501 aaagagccgg cagcagcatt gcgcggattg gcgaagacgc ggccgccgtc ctgagcgttc
     1561 agacgggcga aatccgcgtg actcatgtag acctcgccgc ggacctccag gatctcgggc
     1621 gcgcctttca ggattgtggg aatgtccgaa atcgtccggg cattggcggt gacgttctcg
     1681 ccgacggcgc cgtcgccgcg cgtggcggcc tggaccaggc ggcccctttc atagcgcagc
     1741 gacagcgaca atccgtcgat cttgggttcc gcggcgatct tcagcggcgc ttcctcggac
     1801 aggttcagaa agccgcggat tcgggccacg aaatcggcga cctcggccct tgagaaggca
     1861 ttggccagcg acatcatccg ctgggcatgg acaaccttgc cgaatccctc ggccggtttc
     1921 gcgccgacct tgccggtcgg actgtcagga tgggcgagat ccggaaaagc ctgttccagc
     1981 gcggccagcc gctgtttcag cgaatcgtaa tccgcgtcgg agatccgcgg cgcatccctg
     2041 gtatgatagt cttcgttcgc ccgcgcgatc cgagccgaga gatcggcgat ctcgtcagcc
     2101 gcctgctgct ggtcaagttc gacgatccgg cttcgcggcg atcgcgtccg gacat
//
LOCUS       DTVW01000920            2004 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2130728, whole
            genome shotgun sequence.
ACCESSION   DTVW01000920 DTVW01000000
VERSION     DTVW01000920.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2004)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2004)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2004
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2130728"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(144..359)
                     /locus_tag="EYO87_11975"
     CDS             complement(144..359)
                     /locus_tag="EYO87_11975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66692.1"
                     /translation="MLDVAKSLPEDPEELRRFTALLLAEVKSQAMLMEKLRHKLAGRR
                     SHRFGTSSETVEQLQLALEATRSLSPG"
     gene            complement(421..714)
                     /gene="tnpB"
                     /locus_tag="EYO87_11980"
     CDS             complement(421..714)
                     /gene="tnpB"
                     /locus_tag="EYO87_11980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011749831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family insertion sequence element accessory
                     protein TnpB"
                     /protein_id="HIC66693.1"
                     /translation="MRRGFTTLAAQAETVLKLDPFAGHMFVFRGRRGDLIKIIWWDGQ
                     GACLFSKRLEKGRFVWPSAKEGKIALTPAQLAMLLEGIDWRLPRRSWTPLKAG"
     gene            707..1006
                     /locus_tag="EYO87_11985"
                     /pseudo
     CDS             707..1006
                     /locus_tag="EYO87_11985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011314539.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
     gene            complement(992..1066)
                     /locus_tag="EYO87_11990"
     tRNA            complement(992..1066)
                     /locus_tag="EYO87_11990"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:1.23"
                     /anticodon=(pos:complement(1032..1034),aa:Gln,seq:ttg)
     gene            1161..>2004
                     /locus_tag="EYO87_11995"
     CDS             1161..>2004
                     /locus_tag="EYO87_11995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017997953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacetone oxidase family FAD-binding enzyme"
                     /protein_id="HIC66694.1"
                     /translation="MEQVDILILGGGAAGLFCAGSALAPGRRILVLDHAARPAEKIRI
                     SGGGRCNFTNLASVPERFLSGNPRFSASALARYRPEDFVGLVDRAGIGWHEKSQGQLF
                     CDGKATQITDLLLQRMRGADLRLRTGIGAVERTPDGFVVETDTGPVAARRLVVATGGR
                     SIPKMGATGLAHDLARQFGLRLSEPRPGLVPMTFADQDLALCRPLAGVSVEARIVHGD
                     GAFRDALLFTHRGLSGPVILQISSFWRPGETLQIDLAPDHDVAAALKSARGRAGRVAV
                     ATALG"
BASE COUNT          337 a          647 c          655 g          365 t
ORIGIN      
        1 acggcccagg ccccagacag tctcactcgg gctgtgaccg cagcgcgcgc ggtaatcctg
       61 gctgaacctg cccagatgac cggggatggg acggcgcttc ggctggtcct tcccttcctc
      121 gtccggcagg cgcagcttcg cagtcatcct ggcgatagag atctcgttgc ctcaagcgcc
      181 agttgaagct gctcgacggt ctccgacgac gtgccaaagc gatggctgcg gcgaccggcc
      241 aacttgtggc gcagcttctc catcagcatt gcctgcgact tcacttcggc cagcaaaagc
      301 gccgtgaacc gtcgcagttc ctcggggtct tcgggcaggg atttggccac atcgagcatg
      361 gccaatcata gcaaaacatg ggcgaaacag gaaatcccga acgtgctgtc gcgcccggtt
      421 tcatcccgcc ttcagcggcg tccagctgcg ccgcggcagc cgccagtcga ttccttccag
      481 cagcatcgcc agctgtgccg gcgtcagagc gatcttgccc tccttcgccg acggccacac
      541 gaagcggccc ttctccaggc gcttgctgaa caggcatgcg ccctggccat cccaccagat
      601 gatcttgatc agatctccgc gccgaccgcg gaagacgaac atgtgcccgg cgaacgggtc
      661 cagcttcagc actgtctccg cctgggccgc gagcgtggtg aacccgcgcc gcatgcagca
      721 cgatatcgac cgccacgagg aggccgagca gtcctacatg gacgagggcg tgcggattct
      781 cgaactcgcc cgcaatgcac aggcgctgtt cgaacgccag cccgcccgtg aaaagcgccg
      841 cctgctcaac ttcgtacttt cgaactgctc ttgggaggat ggggaggtgg tcgccacctt
      901 ccgccaaccc tttgatctct tggcggaaac gacggccatc gccgctcgtt caagcgccga
      961 aaacaacggc aattcatcga aaaacgagat ttggctgggg cggtaggatt cgaacctacg
     1021 gtacacggta ccaaaaaccg ttgccttacc acttggccac gccccaaccg tgcgggcgtg
     1081 aatagccaag acctccgtag gctgcaagtc gaaaatcggg aaaacttgtg tgttccgggg
     1141 cgggccgcta tggcgcgcgg atggagcagg tggacattct cattctgggc ggcggggcgg
     1201 ccggattatt ctgcgcgggg tccgccttgg cgccgggcag gcggattctg gttctggatc
     1261 acgccgcccg cccggccgaa aagatccgga tctcgggtgg ggggcggtgc aatttcacca
     1321 atctcgccag cgtgcccgaa aggttcctgt cgggcaatcc gcgtttttcg gccagcgcgc
     1381 tggcgcgcta tcgccccgag gatttcgtcg ggctggtgga tcgcgcggga atcggctggc
     1441 acgaaaagtc gcagggtcag cttttctgtg acggcaaggc cacgcagatc accgacctgt
     1501 tgctgcagcg gatgcgaggc gcggatctgc ggctgaggac cgggatcggc gcggtggaac
     1561 gcacccctga tggttttgtc gtcgaaaccg acactgggcc tgtcgccgcg cgccggctgg
     1621 tagtggcgac aggcggccgg tcgatcccga aaatgggcgc gaccgggctg gcccatgacc
     1681 tggcgcgaca attcggtctg cgcctctcgg agccgcgtcc cggtcttgtg ccgatgacct
     1741 ttgccgatca ggatctggcc ctgtgccgtc cacttgcggg tgtttcggtc gaggcgagga
     1801 tcgtgcatgg cgacggcgcg ttccgggatg ccctgctgtt tacccatcgc gggctcagcg
     1861 ggccggtcat cctgcagatc tccagtttct ggcgccccgg cgagacgttg cagatcgatc
     1921 ttgcgcctga tcacgacgtc gccgcggcgc tgaaatccgc gcgggggcgg gcgggccgcg
     1981 tggcggtggc gaccgcgctt gggc
//
LOCUS       DTVW01000921            1315 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2130852, whole
            genome shotgun sequence.
ACCESSION   DTVW01000921 DTVW01000000
VERSION     DTVW01000921.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1315)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1315)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1315
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2130852"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            73..>1315
                     /locus_tag="EYO87_12000"
     CDS             73..>1315
                     /locus_tag="EYO87_12000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010394189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjbH domain-containing protein"
                     /protein_id="HIC66695.1"
                     /translation="MRRSPLVRRLLVTTLPVAMVLGSVSSTAVAEPLLGRTLSTYGLP
                     GGIDTPTAEVMPDGSLSAAISWSDFGRRANVGFQVLPGLTTVLRYSRVNGVSDYRNED
                     FISDRSLDMRYQILGEQGWRPAVAVGLQDFLGTGVYSGEYIVATKSVTPKVRVSAGLG
                     WGTLAGKPRLFDDSGQGGTLNADEWFSGGAKPFGSVSWQVNDRLSLVAEYSNDTYIAR
                     RGNGVVYQQGNKDPGSKLNLGAYYRWGEAYQAGLYTIGGNTVGAQFSMVLNPRQSPYP
                     SGLEKAPAPVRPRPAPAADPEGWSGIWSQDPSAQPAIQKALGDAMADEGQILEAMALT
                     ANRAEVRLRNQRYISQAEAIGRTARLMTRALPPSVETFVITSTAEGVPTSSVTLHRTD
                     IERLENTQAGQIAAASVLGDAG"
BASE COUNT          213 a          448 c          430 g          224 t
ORIGIN      
        1 gccgctggcg ggatgcaatc gagccgcggc atcgttatga tcgcccgaat ccgaatggga
       61 ggagctgacc cgatgcgccg atctccgctt gtccgccgcc ttctggtgac gacgctgcct
      121 gtcgcgatgg tgctgggatc ggtcagttcg actgccgtgg ccgaaccgct gctgggccgc
      181 accttgtcca cctatggcct gcccggcggc atcgacacgc caaccgccga ggtgatgccg
      241 gacggctcgc tcagcgccgc catctcgtgg tcggatttcg gacggcgcgc caatgtcggc
      301 tttcaggtcc tgcccggcct gaccacggtt ctgcgctatt cccgggtgaa cggggtcagc
      361 gactaccgaa acgaggactt catctcggac cggtcgctgg atatgcgcta tcagattctg
      421 ggcgaacagg gatggcgccc cgccgtcgcc gtgggacttc aggattttct gggcaccggc
      481 gtctattcgg gcgaatacat cgtcgccacc aaaagcgtga cgccgaaggt tcgcgtttcg
      541 gccggccttg gctgggggac gctggcggga aagccgcgcc ttttcgacga cagcggccag
      601 ggcggcacac tgaacgccga tgaatggttc tcgggcgggg cgaaaccctt cggctcggtc
      661 agctggcagg tcaatgaccg cctgtcgctg gtggcggaat attccaacga cacctatatc
      721 gcccgtcgcg gcaacggcgt ggtctatcag cagggcaaca aggatcccgg cagcaagctg
      781 aaccttggcg cctattaccg ctggggcgag gcctatcagg ccggtcttta cacgattggc
      841 ggcaacacgg tcggggcgca attctcgatg gtgctgaacc cgcgccagtc gccttatccg
      901 tccgggctgg aaaaggcccc ggccccggtc cgcccgcgcc ccgcgcctgc cgccgatccc
      961 gaaggctggt ctggcatctg gtcgcaggat ccgtcggccc agccggcgat ccagaaggcg
     1021 cttggcgatg ccatggccga tgagggccag atcctcgaag ccatggccct gaccgcgaac
     1081 cgggccgagg tgcgcctgcg caaccagcgc tatatcagcc aggccgaggc catcggccgc
     1141 accgcccgtc tgatgacccg cgctctgccg ccctcggtcg agaccttcgt gatcacctcg
     1201 accgccgagg gcgtgccgac atcctcggtc acgctgcatc gcaccgatat cgagcggctg
     1261 gaaaacaccc aagccggcca gatcgccgcc gcctcggtgc tcggcgatgc cggac
//
LOCUS       DTVW01000922            2440 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2131433, whole
            genome shotgun sequence.
ACCESSION   DTVW01000922 DTVW01000000
VERSION     DTVW01000922.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2440)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2440)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2440
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2131433"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..367)
                     /locus_tag="EYO87_12005"
     CDS             complement(<1..367)
                     /locus_tag="EYO87_12005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66696.1"
                     /translation="MADNSKTASEPRPPFSDWEAQAALQSRLEADLFAINKATLFDAL
                     VFTGVTTIIVTFDGYGDSGQIEDVEVKAGDDNIAMPGAMIAFAKTVWGQSEPERSTVT
                     IATAVENLAYDVLERTHGGW"
     gene            complement(435..983)
                     /locus_tag="EYO87_12010"
     CDS             complement(435..983)
                     /locus_tag="EYO87_12010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020818541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66697.1"
                     /translation="MTHFRSDTFRPIGQILATEVMPALFRARRLPLRISCLGIASDDG
                     NDKADRFDRTIPLGECQSPEEAMRFACLRLSQSNICTGPDSFPHFRPRIMVIEDCEHR
                     LVLAGEIRAGVILWQQPVASDPEARRIVSEASRLRGMAFRSPDPDEAREYRYRAATLE
                     ARLVDPFWRETTTELLRLPQAA"
     gene            complement(1185..1385)
                     /locus_tag="EYO87_12015"
     CDS             complement(1185..1385)
                     /locus_tag="EYO87_12015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005796662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66698.1"
                     /translation="MVPRLQRQEPIPMSYADATAFAASLADTLMVEIVVFQAGDGTHG
                     ACPAAEFDGDNDMVKLELDPWA"
     gene            complement(1742..2047)
                     /locus_tag="EYO87_12020"
     CDS             complement(1742..2047)
                     /locus_tag="EYO87_12020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011747857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66699.1"
                     /translation="MPANIDIDQIFREDSATPPSERSLPWEETRDGITVVVEPKPHWA
                     DDMRAFRLDMRQYCRYADWTAQGNDARFYDHIDTCGDDVMMKAQAMIAREIADGLWD"
     gene            complement(2145..>2440)
                     /locus_tag="EYO87_12025"
     CDS             complement(2145..>2440)
                     /locus_tag="EYO87_12025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005796660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HIC66700.1"
                     /translation="VGNYLGRVTKPRIIEAVREGAGDWAAQLIDHLKKGDMAKEAERL
                     LAETGWLPEPLRMVDRDAKVDTDADDLPEFLVDDGEDEEATEEEDAQSMVAAE"
BASE COUNT          429 a          744 c          830 g          437 t
ORIGIN      
        1 cccagccgcc atgcgttcgt tcgaggacgt cataggcgag attctcgaca gccgtggcga
       61 tggtgacggt cgagcgctcc ggctccgact ggccccagac ggttttggcg aatgcgatca
      121 tggcccccgg catggcgatg ttatcgtcgc cggccttgac ctcgacgtcc tcgatctggc
      181 cggaatcgcc atatccgtcg aaggtgacga tgatggtggt aacgccggtg aagaccagcg
      241 catcgaacaa tgtcgccttg ttgatggcga acagatcggc ctcgagccgg gattgaaggg
      301 cggcctgcgc ttcccagtcg gagaacggcg ggcgcggttc ggatgcggtt ttgctgttgt
      361 cggccatatc aggctcctga aatgaaaaac ccggcggatg gccgggcgaa gtggatggga
      421 aggttggcgt gaggtcaggc cgcctgaggc aggcggagca gctcggtggt ggtctcgcgc
      481 cagaacggat cgaccagccg ggcttccagc gtggcggcgc ggtagcgata ctcgcgagcc
      541 tcgtcgggat cgggcgaccg gaaggccatg ccgcgcaacc ggctggcctc ggagacgatc
      601 cggcgcgcct cggggtccga ggcaacgggc tgctgccaga gaatgacacc ggcacggatt
      661 tcaccggcga ggaccaggcg atgctcgcaa tcctcgatga ccatgatccg tgggcggaag
      721 tgtgggaagc tgtcggggcc ggtgcagata ttgctctggg acaggcgcag gcaggcaaag
      781 cgcatggcct cttcgggtga ttggcattcc ccaagcggaa tggtgcggtc gaaccggtcg
      841 gccttgtcat taccgtcatc gctggcgatg ccgaggcacg agatgcgcag cggcagcctc
      901 cgggcgcgaa agagcgcggg catcacctcg gttgcgagaa tctggccgat gggccggaaa
      961 gtatcggatc ggaaatgggt catcgggatc actccatgac gggcgccggc gagcctctct
     1021 ctccggcaac caacccgtca cggccgaacg gcccgcactc ttcctctctg gccggggcgc
     1081 gtccccggtt gcgctgccgg cgataggcgg tcatcgcagg accggacgcc cggtcgcggg
     1141 ataagccgcg atccgggcgg agggaatgag gcgcgtgtcg cgcctcaggc ccatgggtcc
     1201 agttccagct tcaccatgtc gttgtcgccg tcgaattcgg cggcggggca agcaccgtgg
     1261 gttccgtccc cggcctggaa cacgacgatc tcgaccatca gcgtgtcggc gaggctggcg
     1321 gcgaaggcgg tggcatctgc gtaggacatc gggatcggct cctgtctctg gaggcggggg
     1381 accatccccc gcgcgacagg cgcccgaagt gtctgactgg atctgcaatc actctcgtgc
     1441 gttcgggcat gtgtcccgaa tccgcgagag cggcacgcgc gcgtaggccg accccttgcg
     1501 ggttgactgc aaagagacgg atcagaccaa ggtttgcgaa tggaagcggg ggtggtgttt
     1561 tgcctctgac aggatgccga agacccgtcg cagatgtttc tccgcgccag ccttgccctc
     1621 atgcggcatc aggatcgtgt tccaggccgg ggatggaacc cgttgcccag accggatcat
     1681 cggaatcatg atgaagctgg tatcgggacc attgaggccg gtaccgggtc cgtgacgacc
     1741 ttcaatccca aagtccgtca gcgatctcgc gcgcgatcat ggcttgcgcc ttcatcatca
     1801 cgtcatcgcc gcaagtgtcg atgtgatcgt agaaccgggc atcattgccc tgcgcggtcc
     1861 aatccgcgta gcggcaatat tggcgcatat cgagacgaaa ggcgcgcatg tcgtcggccc
     1921 aatggggctt tggctccact acgacggtaa tgccatcgcg ggtttcctcc cacggcagcg
     1981 agcgttccga aggaggggtg gcgctgtcct cgcgaaagat ctggtcaatg tcgatatttg
     2041 cgggcatcgg atatctccaa agaaaaagcc cggtcacgag gaccgggcga agtgtggaaa
     2101 cggaacggag gagacggagc agcggaagcc gccccgcctg aggatcattc ggcagcgacc
     2161 atcgactgcg cgtcctcctc ctcggtggct tcttcatcct cgccatcgtc gacaaggaac
     2221 tcgggcagat cgtccgcgtc cgtatcgacc ttggcatcac ggtccaccat gcgcagcggc
     2281 tccggcagcc agccggtttc ggccagcagg cgctcggctt ctttcgccat gtcgcctttc
     2341 ttcagatgat cgatgagctg cgccgcccag tcgccggcgc cctcgcgcac cgcctcgatg
     2401 atccgcggtt tggtcacgcg gccgagatag ttcccgaccg
//
LOCUS       DTVW01000923            1083 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2132716, whole
            genome shotgun sequence.
ACCESSION   DTVW01000923 DTVW01000000
VERSION     DTVW01000923.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1083)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1083)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1083
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2132716"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1083)
                     /locus_tag="EYO87_12030"
     CDS             complement(<1..>1083)
                     /locus_tag="EYO87_12030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA ligase-associated DEXH box helicase"
                     /protein_id="HIC66701.1"
                     /translation="AGGGGHHAIPEVLEQVKAARTTIIFINTRAQAELFFQALWAANE
                     DNLPIGLHHGSLAREARQRVEAAMAAGALRAVVATGSLDLGIDWGAVDLVIQVGAPKN
                     VKRLVQRIGRANHRYNAPSRARIVPANRFEVIECVAALEAVAERDLDGDPRGPGPLDV
                     LCQHIGLTACAGPFDAEALFREVREAGPYRGLTRADFDACLDFAATGGYALRAYDRWQ
                     RLMLRDGLWRLRDPRAARNLRMNVGTIVEAEMLKVRLRGRGGAPLGEVEEAFAASLSP
                     GDTFLIGGQTVRYDGLREMVVEVTRQPARQPRIAVFSGVKLATSTQLSHRVQALIGEP
                     SHHAALPPDTRDWLDLQARIGGLPRDG"
BASE COUNT          160 a          403 c          371 g          149 t
ORIGIN      
        1 cccgtcgcgc ggcagccccc cgatccgggc ctgcagatcc agccagtcgc gggtatcggg
       61 cggcagcgcg gcatgatgcg aaggctcgcc gatcagcgcc tgaacccggt gcgaaagctg
      121 ggtcgatgtg gccagcttca cgccggaaaa caccgcgatc cggggctgtc gggcgggctg
      181 tctggtcacc tcgacaacca tctcgcgcag cccgtcatag cgcacggtct gaccgccgat
      241 cagaaaggtg tcgccggggc tcaggctggc ggcaaaggct tcctcgacct cgcccagcgg
      301 cgcgccgccg cgcccgcgca gccggacctt cagcatctcg gcctcgacga tggtgccgac
      361 attcatccgc aggttccgcg ccgcgcgcgg gtcgcgcagc cgccacagcc cgtcgcgcag
      421 catcagccgc tgccagcggt cataggcccg cagcgcatag ccgccggtcg ccgcgaaatc
      481 caggcaggcg tcgaaatcgg cgcgcgtcag gccgcgatag ggcccggcct cgcggacctc
      541 gcggaacagc gcctcggcgt cgaagggccc ggcgcaggcg gtcagcccga tatgctggca
      601 cagcacgtcc agcgggccgg ggccacgcgg atcgccgtcc agatcgcgtt ccgccacggc
      661 ctccagcgcg gccacgcatt cgatcacctc gaagcggttg gcgggcacga tccgggcgcg
      721 cgagggcgcg ttgtagcgat ggttggcccg cccgatccgc tgcaccagcc gcttgacgtt
      781 cttcggcgcg ccgacctgga tgaccagatc gaccgcgccc cagtcgatgc ccagatcgag
      841 gctgccggtc gcgaccaccg cccgcaaggc acccgccgcc atcgccgcct cgaccctctg
      901 ccgggcctcg cgggcaaggc tgccgtgatg caggccgatg ggcaggttat cctcgttcgc
      961 agcccacagg gcctgaaaga acagttccgc ctgggcgcgg gtgttgatga agatgatcgt
     1021 ggtcctggcg gccttcacct gttccagcac ttcggggatg gcgtggtgcc cgccgccgcc
     1081 ggc
//
LOCUS       DTVW01000924            1127 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2132757, whole
            genome shotgun sequence.
ACCESSION   DTVW01000924 DTVW01000000
VERSION     DTVW01000924.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1127)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1127)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1127
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2132757"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1127)
                     /gene="phaZ"
                     /locus_tag="EYO87_12035"
     CDS             complement(<1..>1127)
                     /gene="phaZ"
                     /locus_tag="EYO87_12035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="polyhydroxyalkanoate depolymerase"
                     /protein_id="HIC66702.1"
                     /translation="MFRLISAWGHVTERSFARMVIKPDWEIPAILGEDGQDHVVYPEP
                     VMRRAFGDLIHFRVSRREPQLRKVLLIAPMSGHYATLMRSTVTSLLPDCEVYVTDWHN
                     ARDIPVSEGKFDIEDYTSYLVDFIRFLGPDTNVVAICQPAPLALAATAILAEDEPASQ
                     PRTLTLIGGPVDPDAAATDVTDFGNRMTMGELEHLAIQSVGFKYRGAGRMVYPGLAQL
                     SSFIAMNAETHAKAFIDKIFAEARGTATEGDRHNRFYDEYLAVMDMTAEFYLSTVERI
                     FKNLEIAQNRFTVNGRPVDIGRITSTAVMTVEGANDDISAPGQCVAALDLCSGVPAER
                     KQQHLEPGAGHYGIFAGKSWRLNIRPLVLDFIDENMKSSTS"
BASE COUNT          203 a          339 c          368 g          217 t
ORIGIN      
        1 cgctggtgct ggatttcatg ttctcgtcga tgaaatccag caccagcggg cgaatgttca
       61 gccgccacga cttgcctgcg aagatgccgt aatgaccggc gccgggttca agatgctgct
      121 gcttgcgctc ggccgggacg ccgctgcaca gatccagcgc cgcaacgcat tggcccggcg
      181 ccgagatgtc gtcattggcg ccctcgaccg tcatcacggc tgtgctggtg atcctgccga
      241 tatcgaccgg tcgcccgttc acggtgaaac ggttctgcgc gatttccaga ttcttgaaga
      301 tccgttcgac cgtggacagg tagaattccg ccgtcatgtc catcacggcc agatattcgt
      361 cgtagaaccg gttatgccgg tcgccttccg tcgcggtgcc gcgtgcctcg gcaaagatct
      421 tgtcgatgaa ggccttcgcg tgggtttcgg cgttcatcgc gatgaacgag gaaagctggg
      481 cgaggcccgg atagaccatc cgacctgcgc cgcgatattt gaagccgacc gactggatcg
      541 ccagatgctc caactcgccc atcgtcatgc ggttgccgaa atcggtgaca tcggtcgcgg
      601 ccgcgtcggg atcgaccggg ccgccgatca gggtcagcgt gcgcggctgc gaggcgggtt
      661 cgtcctcggc caggatcgcg gtcgcggcca gcgccagggg ggccggctgg cagatggcca
      721 ccacattggt atcggggccc aggaaccgga tgaaatcgac cagatagctg gtgtaatcct
      781 cgatgtcgaa cttgccttca ctgacgggaa tgtcgcgcgc gttgtgccaa tccgtgacat
      841 agacttcgca atcgggtagc agcgaggtga cggtggaccg catcagcgtc gcgtaatggc
      901 ccgacatcgg agcgatcagc agcaccttgc gaagttgcgg ctcgcgccgg gaaacgcgga
      961 agtggatcag gtcgccgaag gcgcggcgca tcaccggttc gggatagacg acgtgatcct
     1021 ggccgtcctc gccgaggatt gccggaattt cccagtcagg cttgatgacc atgcgtgcga
     1081 agctgcgttc ggtgacatgg ccccaggcgc tgatcagcct gaacatc
//
LOCUS       DTVW01000925            1418 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2133107, whole
            genome shotgun sequence.
ACCESSION   DTVW01000925 DTVW01000000
VERSION     DTVW01000925.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1418)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1418)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1418
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2133107"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(117..845)
                     /locus_tag="EYO87_12040"
     CDS             complement(117..845)
                     /locus_tag="EYO87_12040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012223204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydrogenase"
                     /protein_id="HIC66703.1"
                     /translation="MSNPDCPHLSIIGFGAFGQLIARHLRDHMTLCVCDPVLLVNDLL
                     QVDLAQAARCRIIVLSVPLSQMRSVLHIIAPHLRPGAMVIDVASVKLLPATMMQAILP
                     DHAQIVATHPLFGPASAREGLTGHRIAWCPLRGDGHRRAAAFLRRLGLRVLATTPEAH
                     DREMAVVQGLTHLIAQGLSGIGPIPDRLTTESFRRLVEAVAMVQADSPELLRTILHDN
                     PHAGPVRARFVKAIAGIAEMAETG"
     gene            1111..1335
                     /locus_tag="EYO87_12045"
                     /pseudo
     CDS             1111..1335
                     /locus_tag="EYO87_12045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008884095.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="succinyl-CoA--3-ketoacid-CoA transferase"
     gene            complement(1326..1418)
                     /locus_tag="EYO87_12050"
                     /pseudo
     CDS             complement(1326..1418)
                     /locus_tag="EYO87_12050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003300079.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
BASE COUNT          300 a          433 c          456 g          229 t
ORIGIN      
        1 cccggcaagg aaatccgcca ccaagaccgc aaagactgcc aagactgcca agaaggctgc
       61 cgtgaaaaag cccgcggccg gcaggaagtc cgccgaatga ccccgtcggg catgcctcag
      121 cctgtctcgg ccatctccgc gatgccggct atcgccttca cgaaccgcgc gcggaccggc
      181 ccggcatggg gattgtcatg caggatcgtc cgcagcagtt caggtgaatc cgcctgaacc
      241 atcgccacgg cctcgaccag ccgccggaag ctttcggtgg tcagcctgtc gggtatcggt
      301 ccaattcccg acaaaccctg cgcgatcaga tgcgtcagcc cctgcaccac ggccatctcg
      361 cggtcatgtg cctctggtgt ggttgccaga acccgcaatc ccagccttcg caggaatgcc
      421 gccgctcgcc ggtggccgtc gccgcgcagc gggcaccatg cgatgcgatg acccgtcagg
      481 ccctcgcgcg cgcttgcagg cccaaacagc ggatgcgtgg caacgatctg ggcatggtcg
      541 ggcaggatgg cctgcatcat cgtggcaggc agcagcttga ccgaagccac atcaatgacc
      601 atcgcgccgg ggcgaagatg gggcgcgatg atgtgcagca cggaccgcat ctgcgacagc
      661 ggcacggaca gaacgatgat gcggcagcgc gcggcctgcg caagatcgac ctgcaacagg
      721 tcgttgacca acagcacggg gtcgcagacg cacaatgtca tgtgatcgcg caaatggcgg
      781 gcgatcaact ggccgaaggc tccgaagccg atgatcgaaa gatggggaca gtcgggattg
      841 gacatgggga cgaccctgga tttcggcgca ggctcgtggt gatgtcatcc ggtcaaccgc
      901 ttccccgcgc ggttgacatg gctctgcccc cgctatgtca gcgggcgata agagatcgca
      961 gagatggcgc ggatgcggtt catccatcat gaatgccacc ggtcgggtcg ccaggtcaag
     1021 tcgcggcacg aacagggtgt ggcctgattg acacggattg ccctgcgggc catgactttc
     1081 atcgaaaccg gatccatgag gggagggccg atgaaaaagg tctatgacaa cgcggccgag
     1141 gcgctggacg gtcttttgaa ggacgggatg ttcatctcgg ccggaggctt cgggctgtgc
     1201 ggcatacccg aattgctgat cgacgccatt gtcgatagcg gcgtaaagga tctgaccatc
     1261 gccagcaaca attgcggcgt ggacgggttc ggcctgggca agctgctgga caccaagcag
     1321 atcaggaaga tgatcaggat cttcgagccc tcgccaatcc ctacccagag catgaccagc
     1381 ggaataaagg caaccgctgg catgtaacgg ataaagtc
//
LOCUS       DTVW01000926            1795 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2134916, whole
            genome shotgun sequence.
ACCESSION   DTVW01000926 DTVW01000000
VERSION     DTVW01000926.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1795)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1795)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1795
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2134916"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            513..1502
                     /gene="tauA"
                     /locus_tag="EYO87_12055"
     CDS             513..1502
                     /gene="tauA"
                     /locus_tag="EYO87_12055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018064344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="taurine ABC transporter substrate-binding
                     protein"
                     /protein_id="HIC66704.1"
                     /translation="MSGYFRTTMIASAALLALSGGAWAQSVVIGHFGNPTPMQVAASE
                     GKFSEATGWDVEWRKFAAGTDVIAAMASGDIKVAELGSSPLAIAATQGVDLEMFMVAQ
                     VIGNAESLIVRDGSEIATIEDLKGKRIATPVGSTAHFSLMGVLAKAGLSTSDVNIMSM
                     PPDQIAAAWEQGAIDGAFIWQPVQNQLLQSGTRLVGADQTAEWGYPTFDAWVVNKQFA
                     EQNREGLIGFIKTINDANNAYLDDKQAWTADSEQVKIIADYTGADPAQVPDVLSGYTF
                     LPLSEQVKPEWLGGGLSDVLKSTAEFLKEAGRIDSVGDDYAPFVTDAYVKAAQ"
     gene            1563..>1795
                     /locus_tag="EYO87_12060"
     CDS             1563..>1795
                     /locus_tag="EYO87_12060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018387323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HIC66705.1"
                     /translation="MALEIRDASVVYPAQAGRAPVEALSRINLTVSEHDFVVALGASG
                     CGKSTLLNLIAGFLSPSSGQIVLDGTEVSGPGA"
BASE COUNT          326 a          568 c          601 g          300 t
ORIGIN      
        1 cggccgcaga gaccttcatc ggcagttcaa tccagttccg catccccgcg atcagcggcg
       61 aggccgcgca gaggttcgtt caggactcgg cgcggctggg ggtcgagctg aaatggttcg
      121 gcgccgccga gccggtgggc ttcacctcgg cgcatcgaag ctggcactac gtcgcgccgc
      181 aatccctgcc gcgcacggac gcggttctgg cggggctgtt cgacatgcgc ctgccgctga
      241 cgttcagcct cgaggattgc gaccatatcg gccgcatcat cgccgcctgc gccccatcgc
      301 ttgccgcggc agagcggcaa tgactgcgcc ggcttccgcg gcgacggtgc gtgggccacg
      361 accgggccag gcccgtttcg cgcgattgcg gcgtttcatg gcctgcctca gccgccgggg
      421 gccatgaatg aatgaatgaa gcagggggcg cggcaatctc atacgcgcgc ccggtgaaga
      481 atcgacaaca acgacaacag ggaaacagaa ccatgtcagg atattttcgc acgaccatga
      541 tcgcttccgc cgcgctgctg gcgctgtcgg gcggggcctg ggcccaatcc gtggtgatcg
      601 gccatttcgg caacccgacc ccgatgcagg tcgcggcctc cgaaggcaag ttttccgagg
      661 ccacaggctg ggatgtcgag tggcgcaagt tcgccgcggg caccgatgtg atcgccgcga
      721 tggcctcggg cgacatcaag gtggccgagc tgggctcgtc gccgctggca attgccgcga
      781 cgcagggcgt cgatctggaa atgttcatgg tggcgcaggt catcggcaat gccgaaagcc
      841 tgatcgtgcg cgacgggtcc gagatcgcga cgatcgagga tctgaagggc aagcggatcg
      901 cgacaccggt cggctcgacc gcgcattttt cgttgatggg ggttcttgcc aaggccggac
      961 tcagcaccag tgacgtgaac atcatgtcga tgccgcccga tcagatcgcg gccgcctggg
     1021 aacagggcgc catcgacggc gccttcatct ggcagccggt gcagaaccag cttctgcaaa
     1081 gcggcacgcg gctggtcggg gcggaccaga ccgccgaatg gggctatccg acattcgatg
     1141 cctgggtggt caacaagcaa ttcgccgaac agaacaggga agggctgatc ggcttcatca
     1201 agaccatcaa cgatgccaac aatgcctatc tggacgacaa gcaggcctgg accgccgaca
     1261 gcgaacaggt caagatcatc gccgactaca ccggtgccga cccggcgcag gttcccgacg
     1321 tgctgtcggg ctacaccttc ctgccgcttt ccgaacaggt gaaacccgaa tggctgggcg
     1381 gcggcctgtc cgacgtgctg aaatcgaccg ccgaattcct gaaggaggcg ggccggatcg
     1441 acagcgtggg cgatgattac gcgcccttcg tcaccgacgc ctatgtcaag gccgcgcagt
     1501 aatcgccttc ggcaatcccg cgcaggggcc gatcctgcgc gggcacaggg aagggcaatc
     1561 acatggctct ggaaatacgg gatgcttcgg tcgtctatcc ggcccaggcc ggccgcgcgc
     1621 cggtcgaggc gctgtcacgg atcaacctga ctgtcagcga acatgatttc gtcgtcgcgc
     1681 ttggcgcttc gggatgcggc aaatccacgc ttctgaacct gatcgcgggg tttctgtcgc
     1741 cgtcctcggg ccagatcgtg ctggacggga ccgaggtgtc cgggccaggc gcgga
//
LOCUS       DTVW01000927            1155 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2135563, whole
            genome shotgun sequence.
ACCESSION   DTVW01000927 DTVW01000000
VERSION     DTVW01000927.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1155)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1155)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1155
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2135563"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(203..463)
                     /locus_tag="EYO87_12065"
     CDS             complement(203..463)
                     /locus_tag="EYO87_12065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010392848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66706.1"
                     /translation="MRDFFIRSMEWIVNIFITLGAIAVVVSGLVVMFSDQGGFLRGLA
                     VLFGGAIYLIVVGGIIYLGLGIYNNTRRTAEAVEALVSRQTP"
     gene            complement(527..1108)
                     /locus_tag="EYO87_12070"
                     /pseudo
     CDS             complement(527..1108)
                     /locus_tag="EYO87_12070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998317.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--cysteine ligase"
BASE COUNT          216 a          398 c          343 g          198 t
ORIGIN      
        1 ccgcccgcat cgcctgcccc cttcttgctt tgcttccgac ctgccaccgc ttgccgcccg
       61 tttcaagcaa ggcgggcggc gaatgaggtc atattgtcgt gcgccgcggc gccgatcgga
      121 aggcggatgg cggccggccc accgcgaacc ctgcagggtt tcggacgacg gcgaaagccg
      181 ggccagacgc gccggcggca attcaggggg tctggcggct gaccagtgct tcgaccgcct
      241 cggcggtgcg gcgggtgttg ttgtagatgc ccagccccag atagatgatc ccgcccacga
      301 cgatcagata gatcgcgccg ccgaacagaa ccgcgaggcc gcgcaggaag ccgccctgat
      361 cgctgaacat caccacaagg ccgctgacca ccaccgcgat cgcgcccagc gtgatgaata
      421 tgttgacgat ccattccatc gaccggatga agaaatcgcg catctgcaaa tactccgggg
      481 ctgacaatcc gatcagcgtg acacgcgatg cgcgatcacg caatcgtcag taggagtatt
      541 cggcatagat gcgtgacagg tcgccctgcc attcgccgtg atatttcgcc agcaattcgt
      601 ccgccggaac gcggccggtc tcgacgcttt ccctcagcgc gttcaggaaa tgcgtctcgt
      661 cggggatcag cccgccggcg ccctgccgcg cgcggttctt caggccctgt tcggcgatgg
      721 ccagcacttc gcgtgccaga tcgtgcaggc ggacgccgcc ggcttcgccc tgcaacgctt
      781 cgcgtccggc cgcccggcgc agcccttcgc gcgtctcgtg gtcccagccc ttgaccagat
      841 cccaggccgc gtccagcgcc tgctggtcat aggtcagccc gacccacagc gccggcagcg
      901 cgcatagcct gcgccacggc ccgccatcgg cgccgcgcat ctcgatgaat ttcttgaccc
      961 gcgcctcggg aaaaaccgtc gtcaggtggt cggcccaatc cgacagcgtt ggaatctcgc
     1021 ccggaagggc cggcaattcg cccttcagga aatcgcggaa ggactggccc agagcatcga
     1081 gataacgacc gtcgcgatag acgaaataag aaaattttca ttttcttact taaaaaagta
     1141 tgctccctcc aaaca
//
LOCUS       DTVW01000928            1356 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2136862, whole
            genome shotgun sequence.
ACCESSION   DTVW01000928 DTVW01000000
VERSION     DTVW01000928.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1356)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1356)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1356
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2136862"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..158)
                     /locus_tag="EYO87_12075"
     CDS             complement(<1..158)
                     /locus_tag="EYO87_12075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014874174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HIC66707.1"
                     /translation="MTKFSDLKIDPKVLKAIEEAGYENPTPIQEGAIPPALEGRDVLG
                     IAQTGTGKT"
     gene            423..1355
                     /locus_tag="EYO87_12080"
     CDS             423..1355
                     /locus_tag="EYO87_12080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007425785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66708.1"
                     /translation="MEMDVTGGLSPIQAFAVVGIAGVGAQWLAWRFRLPAIVLMLAAG
                     LLLGPVTGIFVPARDIGDLIKPMIALAVAVILFEGGLTLSLKKLADARPGVRRLVYIG
                     APLGWILSSLALVFGAGLGWESAIVFGGVMIVTGPTVIAPLLRQARLTSRPAQVLQWE
                     GIVNDPIGALVGVIALEIVLVYRTGVTAGEAIGQLVLGVGFAALIGAVAGYMLVQAFR
                     RGWVPEYMKVPLLFVAVLAIFAVSDTLLQESGLLAVTVMGLVVANADLPSYHELHRFK
                     EHATILLVSGVFILLAAGVEFDTLAQLNWLRQRV"
BASE COUNT          191 a          415 c          479 g          271 t
ORIGIN      
        1 gtcttgccgg tgccggtctg ggcgatgccc agaacgtcgc ggccttccag cgcgggcgga
       61 atggcccctt cctggatggg tgtcgggttc tcgtagccgg cctcttcgat ggccttcaga
      121 accttggggt cgattttcag atcggagaat ttcgtcatgc gggggctttc cattggccgc
      181 gccaatcgcg cgccgcgttc catgccgtgc gcccgaatgg cgcatcagtc ggctgtcatg
      241 ggacgcagtt ccgcacgccc cttcggtcgt tccgccggat gcggacccgc ctcgcctaaa
      301 ccaaccgggc aggaaggtca atctttccgg ccgaaaacct gccacaatgg cagtcgacag
      361 ggaacctttc ggccggcaga cgcttggacg cgggacaccg gcgcacagaa cgagggacag
      421 gaatggagat ggacgtgacc ggcgggctga gcccgatcca ggccttcgcc gtggtcggta
      481 tcgcgggggt gggcgcgcaa tggctggcat ggcggttccg cctgcccgcg atcgtgctga
      541 tgctggccgc cgggttgctg ctgggcccgg tcacgggaat tttcgtgccg gcccgcgata
      601 tcggcgatct gatcaagccg atgatcgcgc tggccgttgc cgtgatcctg ttcgaggggg
      661 gcctgacgct gagcctgaaa aagctggccg atgcccggcc gggcgtcagg cggctggtct
      721 atatcggggc gccgctgggc tggatcctgt cgtcgcttgc gctggttttc ggtgccgggc
      781 tgggctggga atcggccatc gtcttcggcg gggtcatgat cgtcaccgga cccacggtca
      841 tcgcgcccct gctgcgacag gccaggctga cctcgcggcc ggcgcaggtc ctgcaatggg
      901 aaggcatcgt caacgacccg atcggcgccc ttgtcggcgt catcgcgctg gaaatcgtgc
      961 tggtctatcg caccggtgtc accgccggcg aggccatcgg acaactggtt ctgggcgtcg
     1021 gcttcgcggc gctgatcggg gccgtggcgg gctacatgct ggtgcaggcc ttccggcgcg
     1081 gctgggtgcc cgaatacatg aaggttccgc tgcttttcgt cgccgtgctg gcgatcttcg
     1141 cggtatcgga cacgctgttg caggaaagcg ggctgctggc ggtgacggtc atggggctgg
     1201 tcgtcgcgaa tgccgatctg cccagctatc acgaactgca ccgcttcaag gaacatgcga
     1261 cgatcctgct ggtttcgggg gtgttcatcc ttcttgcggc gggtgtggaa ttcgacacgc
     1321 tggcgcaact gaactggctg cgccagcgtg tctaat
//
LOCUS       DTVW01000929            1734 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2137608, whole
            genome shotgun sequence.
ACCESSION   DTVW01000929 DTVW01000000
VERSION     DTVW01000929.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1734)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1734)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1734
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2137608"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1309)
                     /locus_tag="EYO87_12085"
     CDS             complement(<1..1309)
                     /locus_tag="EYO87_12085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007426724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HIC66709.1"
                     /translation="MEPPIGPGAVPEFRADLPASADVVVIGGGIVGVTTALYLARDGL
                     SVVLCEKGVIAGEQSSRNWGWVRAQGRDEAEIPIMLEARQLWRGLSRELGEGLGLAAC
                     GVSYLARDETSMTRYEAWLDVARHHGLDSRIMGRAELDRVLPNSAGWLGALTTPSDMR
                     AEPAFAVPAIARLAAAAGVTIREHCAARALETTAGHISAVLTEAGAIRTDRVLLAGGA
                     WSGLFAGNAGMILPQLSVRATVAATEAMPEFWPGAAADPDVAFRRRADGGYTLAPGTA
                     HDFWIGPAAFRHLRAYLPQIRRDLSQTSLQPAAPRAYPDAWRTPRRWSADAASPFEAV
                     RILSPDPNPARIDHLVKAFASAFPRIGRPRIRAAWAGMIDTMPDHVPVLDETPMPGFF
                     VATGLSGHGFGIGPGVGRVMAAMIQGRAPRHDLTRFRFSRFSDG"
     gene            complement(1312..>1734)
                     /locus_tag="EYO87_12090"
     CDS             complement(1312..>1734)
                     /locus_tag="EYO87_12090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011746954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIC66710.1"
                     /translation="LNPKLIIADEAVSALDVSVQAQVLNLLMELQQDMGISMLFISHD
                     MAVVERVSHHVGVMYLGRIVELGTRAQVFENPQHSYTRQLMLAVPVADPRQKKISEDL
                     EFRPIPSPIHPVDYLASPSVYREVAPGHRVLVDPVTHS"
BASE COUNT          295 a          578 c          602 g          259 t
ORIGIN      
        1 atccgtccga gaagcgcgaa aagcggaacc gtgtcagatc gtggcgcggc gcccggccct
       61 gaatcatggc ggccatgacg cggcccaccc ccggaccgat gccgaagccg tggccggaca
      121 ggccggtggc gacgaagaat ccgggcatcg gagtttcgtc cagcaccgga acatggtcgg
      181 gcatcgtgtc gatcattccc gcccaggcgg cacggatccg cgggcggccg attcgcggaa
      241 aggcgctggc aaacgccttg acgagatggt cgatgcgggc cggattcgga tccgggctga
      301 ggatccgcac cgcctcgaag ggcgaggctg cgtcggcgga ccatcggcgc ggcgtgcgcc
      361 aggcatccgg ataggccctg ggcgcggccg gttgcaggct tgtctgcgac aggtcgcggc
      421 ggatctgggg cagataggcc cgcagatgtc tgaacgccgc cgggcctatc cagaaatcat
      481 gcgcggtgcc gggcgccagc gtatagccgc catcggcgcg gcggcggaag gcgacatccg
      541 gatcggccgc ggcgccgggc cagaattcgg gcatggcctc ggtggcggcg acggtggcgc
      601 ggaccgacaa ttgcggcagg atcatcccgg cattgcccgc gaaaagaccc gaccatgcgc
      661 cacctgccag aagaacgcgg tcggtccgga tcgccccagc ctcggtcagc acggccgaga
      721 tgtgtccggc cgtcgtctcc agcgcgcggg cggcgcaatg ttcgcggatg gtgacgcctg
      781 ccgccgcggc cagccgggcg atggcgggaa cggcgaaggc cggttcggcg cgcatgtccg
      841 atggcgtggt cagcgcaccc agccagcctg ccgaattggg cagcacgcgg tccagttctg
      901 cgcggcccat gatgcggctg tccaggccgt ggtggcgggc cacgtccagc catgcctcgt
      961 agcgggtcat gctggtctcg tcccgtgcca gatagctgac gccgcaagcc gcaaggccca
     1021 gcccctcgcc cagttcccgt gacaggccgc gccatagctg gcgggcctcc agcatgatcg
     1081 gaatttcggc ctcgtcgcgg ccctgcgcgc ggacccaacc ccagttgcgc gaggattgtt
     1141 cgcccgcaat cacgcccttt tcgcacagca cgaccgacag cccgtcgcga gcaagataca
     1201 gtgccgtggt gaccccaacg atgccgccgc cgatgaccac gacatccgcg gaggctggca
     1261 ggtcggcgcg aaattcgggg accgcgccgg ggccgatcgg cggttcgatc ctcacgaatg
     1321 ggtcacggga tcgaccagca cccggtgacc aggcgcgact tcgcgataga ccgaagggct
     1381 ggccaggtaa tcgaccggat ggatcggcga agggatcggg cggaattcca gatcctcgct
     1441 gatcttcttc tggcgcggat cggcgacggg gacggccagc atcagttgtc tggtatagct
     1501 gtgctgcggg ttctcgaaga cctgcgcgcg ggtgcccagt tccacgatcc gtcccagata
     1561 catgacgccg acatgatggc tgacccgttc gaccaccgcc atgtcgtggc tgatgaacag
     1621 catcgagatg cccatatcct gctgcaattc catcagcagg ttcagcacct gcgcctgcac
     1681 cgagacatcc agcgccgaga ccgcctcgtc cgcgatgatc agtttcgggt tcag
//
LOCUS       DTVW01000930            1772 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2139469, whole
            genome shotgun sequence.
ACCESSION   DTVW01000930 DTVW01000000
VERSION     DTVW01000930.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1772)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1772)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1772
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2139469"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..316)
                     /locus_tag="EYO87_12095"
     CDS             complement(<1..316)
                     /locus_tag="EYO87_12095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007254649.1"
                     /note="starvation-sensing protein; maybe involved in
                     homoserine lactone degradation; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional D-altronate/D-mannonate
                     dehydratase"
                     /protein_id="HIC66711.1"
                     /translation="MKITDAKIFVGGPGKNYVTLKVLTDQGVYGLGDATLNNRETLPA
                     AYLRDYIVPNLIGMDPRNSEDVWQFFYRGAYFRRGPVAMAAFGAVDMARWDIKGKLAG
                     MPV"
     gene            331..1332
                     /locus_tag="EYO87_12100"
     CDS             331..1332
                     /locus_tag="EYO87_12100"
                     /inference="COORDINATES: protein motif:HMM:PF01554.16"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66712.1"
                     /translation="MFVRSGQFRPVPVTPDQVDDLLVLAAFLKGRVGLHRLAVFSLVI
                     LGEAIGQTLSSYFNGCGATRIPLYGFCLSLPVNVATSIVLIHGYLGLPAFGVTGAAIG
                     SAIAIAIQVAFLVHRFLRRDGHILRAQGWRQGTFPATLRRHLGFALPIAATFFSATFA
                     TQVCTLIYARLSLNEFAAMTLIAPWIMVTGTVGMQWAQATGIIVAQLLGQKWSEPVFD
                     RFLLSAWRGALVASGIVSALLLAVCLSAGILYADLNKETRVVLLGFLPVLLVLPFPKG
                     SNAICGNTLRASGDTIYVMHIFVCYTPCGLSVRFSALRRNFPSPICPRHCPLCSSSM"
     gene            complement(1421..>1772)
                     /locus_tag="EYO87_12105"
     CDS             complement(1421..>1772)
                     /locus_tag="EYO87_12105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011512773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transporter"
                     /protein_id="HIC66713.1"
                     /translation="VGLLAFSTFPWELVKDESAAGLNLFIQTYSAFLGPIFAILVVDY
                     FVLRRQKLDLDKLYDADGPYKGINWAAVIAMAIGVVVALIFSGISWYASLIPAGLAYW
                     LLMRSMPSARRFAS"
BASE COUNT          307 a          569 c          524 g          372 t
ORIGIN      
        1 agaccggcat tcccgccagc ttgcccttga tgtcccaccg cgccatgtcg acggccccga
       61 acgcggccat cgcgacggga ccgcgccgga aataggcgcc acggtagaag aattgccaga
      121 catcctcgct gttgcgcggg tccatgccga tcaggttcgg tacgatgtag tcacgcaggt
      181 aggcggcagg cagcgtctcg cggttgttga gcgtggcgtc tcccagcccg tagacgccct
      241 gatcggtcag aaccttgagc gtgacgtagt tcttgccggg accgccgacg aagatcttgg
      301 catcggtgat cttcatggcc taacctcccc atgttcgttc gatcgggaca gttccgtcca
      361 gttcccgtta ctcctgatca ggtcgatgat ctgctggtac tggctgcctt cctgaaaggt
      421 cgggtaggac tccaccgcct cgcggtcttc tcgctggtga tcttgggaga ggcgatcggc
      481 caaaccctgt cgagctattt caatggctgc ggcgcaaccc ggattccgct ttacggtttc
      541 tgcctgtcgc tgcctgtcaa cgtcgctacc agcatcgtgc tgatccacgg atacctgggc
      601 cttcctgcct tcggcgtcac gggcgcggcg attggcagcg ccatagcaat cgcgatacag
      661 gtcgcctttc tggttcaccg cttcctccgc cgagacgggc acatcctgcg agcgcaaggg
      721 tggcgtcagg gaacctttcc ggcaacgttg cgccgccatc tcggctttgc gctcccgatc
      781 gctgcgacct tcttcagtgc cacgttcgcc acccaagtgt gcacgctgat ctatgcccgg
      841 ctgagcctca acgaatttgc cgcgatgaca ctaatcgcgc cctggatcat ggtgaccggc
      901 acggtcggga tgcagtgggc gcaggcaacc gggattatcg ttgcacagct cctcgggcag
      961 aaatggtccg agcctgtatt cgatcgcttc ctactcagtg cctggcgcgg cgcgctggtc
     1021 gcctcgggta tcgtctcggc gctcctgctc gcggtctgtc tgtccgccgg cattctttac
     1081 gccgatctga acaaagagac ccgcgtcgtc ttgctcggct tcctccctgt gctgcttgtc
     1141 ctgcccttcc caaagggctc gaacgcgatt tgcggcaaca cccttcgggc cagtggcgac
     1201 acgatctatg tgatgcacat cttcgtctgc tatacacctt gcggactgtc cgttcggttt
     1261 tcagcgttga gaagaaactt tccatcgccg atttgtccca gacattgccc gctctgctca
     1321 tcgagcatgt gaccgctcgc ggatcctgct cgtcaacatg cctctatgct gctttgcagc
     1381 cgcggagcga actgcccggc gtgtttgccg ggcagagccg tcaactggcg aagcgccggg
     1441 cgctcggcat cgaacgcatc agcagccagt aggccaggcc cgccgggatc aggctggcgt
     1501 accaggagat acccgagaag atcagagcga ccaccacgcc gatcgccatg gcgatcactg
     1561 cagcccagtt gatgcccttg taggggccat cggcgtcata gagcttgtcg agatcgagct
     1621 tctggcggcg cagaacgaag taatccacca ccaggatcgc gaaaatcggc ccgaggaagg
     1681 cggaataggt ctggatgaag aggttcagcc ccgcagcgga ttcatccttc accagctccc
     1741 aggggaaggt gctgaaggcg agcagcccga cg
//
LOCUS       DTVW01000931            1211 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2145530, whole
            genome shotgun sequence.
ACCESSION   DTVW01000931 DTVW01000000
VERSION     DTVW01000931.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1211)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1211)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1211
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2145530"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(84..242)
                     /locus_tag="EYO87_12110"
                     /pseudo
     CDS             complement(84..242)
                     /locus_tag="EYO87_12110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011747723.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor protein MotB"
BASE COUNT          214 a          422 c          382 g          193 t
ORIGIN      
        1 ccaagcgcgg cgacgcgatg gccaagctgg tcgatctgct gttcctgacg cgacagtttc
       61 cggtcctgcc gggtgatcgt gtcgtcctgc gtggtgatct gttcgcgcag cacagactgc
      121 accaccatga aaatcgtcag cacgaacatc agcaccatca acagggccgt catcgcatcc
      181 acgaaacccg gccagatcgt ggccgagaag cgattgaccg aggatgcccg gcgcagtgcc
      241 atgatctagc gtgcgccccg gtcgatcagc ggatcgtgca gcagatcgtc gcggaacgga
      301 tcgccgaacc gcgccgcgcg caccgcccgt gtcagcacca ggatgtccga gcgcagttcg
      361 gccagcatct cgtcccggcc ctcgttcaga tcggcgacca tgcgttgcag cgcggtttcg
      421 attcccgaca ggtcgggcgg aaccggcgcc ggttgatcgg cgcgcgattg cgccagttcg
      481 accagccttt cctgaccctc ggccacacgg ttcagcgcgc cgctgaggct ggccgcgcgg
      541 gccacggtcg attcccgttc ggcctcggcc cggcggacca gcgcctccag cgcctcggcc
      601 atgaccacga tgcgttcatc cgccatggcg gcggcgtcgt cgcggccggc atcgcgttcg
      661 gcatggtatt gctgcaaccg ctccatctgg tcggccatct gttccagaaa gcccgcgatg
      721 gcggcatcat tcgccccctc gccctctgtc gagcccagcg agacgcgagt aaagcccgac
      781 atccattctt ccagctcacg gtaatagcgg ttctggccat gagtgacgaa cagttccagc
      841 aggcccacga ccagcgatcc ggccagaccc agaagcgacg acgaaaaggc cgtggccatg
      901 ccgccgagct gcgcttcaag tccgcccatc agcttgtcga agaccgcgat gccgctttcg
      961 ccttcctgtg gggccagtgc ccggatcgtg tccacgaccg ccggaacggt ggtggcgagg
     1021 ccatagaagg tgcccagaag gccaaggaag atcagaagat tggacaggta tcgcgtgatg
     1081 tcgcgcaatt cctcgatccg cgtcgcgacg gaatcgagga tcgaccgcgc cgaaccggtc
     1141 gagatcacgc cgcctgccgg cccgcgggtt cccagcagcg ccgccagggg cgccagcagg
     1201 cgcggcggca c
//
LOCUS       DTVW01000932            2360 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2147573, whole
            genome shotgun sequence.
ACCESSION   DTVW01000932 DTVW01000000
VERSION     DTVW01000932.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2360)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2360)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2360
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2147573"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..326)
                     /locus_tag="EYO87_12115"
     CDS             complement(<1..326)
                     /locus_tag="EYO87_12115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017498861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconokinase"
                     /protein_id="HIC66714.1"
                     /translation="MHDGREEGRASVMQQRPVLVMGICGVGKSTIAAAIAESLDGRFI
                     EADSYHDSASVARMRAGLPLTDEMRWGWLDRLGDAVVAAQKRAVLACSALGRAHRDRL
                     RARTGPL"
     gene            389..1411
                     /locus_tag="EYO87_12120"
     CDS             389..1411
                     /locus_tag="EYO87_12120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007091274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HIC66715.1"
                     /translation="MEKSRKTTLSEVAVAANVSPITVSRALRSPEKVSAEARERITRA
                     IADLGYVPDPAARALASGRTDVVGVLIPSVSNNVFSDVLHGIYDGIADSTLSVQLGTT
                     GYSPLAEERLIRVFLSQRPSGLIVAGHEQSPAARRLLAEANCPVVQIMEIGPQPIDLA
                     VGLSHFDGARAATAHLLDRGYRAPAFLGAQMDPRSQRRLAGFREGIRLAGRDGPDRVV
                     TTPEPSSVSLGCRLLADLLARHPEADAVLCNNDDLALGVLFEAMRRNLPVPDRLGICG
                     FNDLEMMAAAQPPLSSIATDRHGMGRMAVHLIRQRHGGTGPARGHALDLGFALRARES
                     TAGRRG"
     gene            complement(1464..>2360)
                     /locus_tag="EYO87_12125"
     CDS             complement(1464..>2360)
                     /locus_tag="EYO87_12125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019965235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylglucosamine-6-phosphate deacetylase"
                     /protein_id="HIC66716.1"
                     /translation="GILPTLITDRPEATAAVIAAGIEAARAGVPGFLGLHLEGPHLDP
                     RRKGAHDAALIRPMQDDDLARLCGAARALPALMVTLAPESVSPQQVAALSGAGAIVSL
                     GHSDCDLDAAGAAFAAGAACATHLFNAMSQLGHRSPGLVGAVLAGDAHAGLIADGIHV
                     HPAAMRVALAARAEGLFLVTDCMAFAGTDAAEMRLGGRRILRRDGRLTLEDGTLAGAD
                     LSMDRAIATLVGQAGAAPERALAMATSIPADLIRAGDRLGRIAAGRAADLVRLDAALA
                     LRAIWRDGDFHNPRPASGRTAI"
BASE COUNT          338 a          827 c          828 g          367 t
ORIGIN      
        1 agcggtccgg tccttgcccg cagccggtcg cgatgcgcac gcccaagggc cgaacaggcc
       61 agcacggccc gcttctgcgc cgcaaccacg gcgtctccca gccggtccag ccagccccat
      121 cgcatctcgt cggtcagcgg cagtccggcc cgcatccgcg cgacgctggc ggaatcgtgg
      181 tagctgtcgg cctcgatgaa ccggccgtcc agggattcgg cgatggccgc ggcaatggtg
      241 gatttgccca cgccgcagat gcccatgacc agaaccggac gctgttgcat gaccgatgcc
      301 ctcccctctt cgcggccatc gtgcatgaca gcgctgtcat ccgtcaagac gcttttcttc
      361 gccacggaac cgcgtaatct gccaaatgat ggagaaatcg cgaaaaacga ccctttcgga
      421 agtggcggtg gcggcgaatg tcagccctat caccgtctcg cgcgcattgc gcagtcccga
      481 aaaggtctcg gccgaggcga gagagcgaat cacgcgcgcc atcgccgatc tgggctatgt
      541 tccggacccg gccgcccgcg cgctggcctc gggacggacc gatgtggtgg gggtgctcat
      601 cccctcggtg tccaacaacg tgttttccga tgttctgcat ggcatctatg acggaatcgc
      661 ggacagcacg ctgtcggtgc agctgggcac gaccggctat tcgccgctgg cggaagaacg
      721 gctgatccgg gtctttctgt cgcagcggcc ctcggggctg atcgttgccg ggcacgagca
      781 atcgcccgcc gcgcggcggc tgctggccga ggccaattgc ccggtcgtgc agatcatgga
      841 gatcggaccc cagcccatcg acctggccgt gggcctttcg catttcgacg gcgcgcgcgc
      901 tgccacggcg catctgctgg atcgcggtta ccgcgcgccg gcctttctgg gcgcgcagat
      961 ggatccgcgc agccagcgtc ggctggcggg gttccgcgag ggtattcgcc tggccggtcg
     1021 ggacgggccg gaccgcgtgg tgacgacgcc cgaaccgtct tcggtcagcc tcggctgtcg
     1081 gcttctggcc gatttgctgg cccgccaccc cgaggctgac gcggttcttt gcaacaatga
     1141 cgatcttgcc cttggcgtgc tgttcgaggc gatgcggcgc aatttgccgg ttcccgacag
     1201 gctgggcatc tgcggtttca acgatctgga gatgatggct gccgcccagc cgccgctgag
     1261 ttcgatcgcc accgaccggc atggcatggg ccgcatggcg gtgcacctga tccgccagcg
     1321 ccatggcggc accggcccgg cccgcggtca cgccctggat ctgggttttg ccttgcgcgc
     1381 acgggaaagc accgcggggc gccgcggctg accgcgccgc ggcggatcgc cggcgcgggc
     1441 gcttggtcag tcgcggcctt tttctagatc gcggtccttc cggacgccgg gcgggggttg
     1501 tggaaatcgc cgtcgcgcca gatcgcgcga agggccagcg ccgcgtcaag ccggaccaga
     1561 tcggcggcgc gcccggcggc gatgcggccc agcctgtcgc ccgcgcggat cagatcggcg
     1621 gggatcgagg tggccatggc cagcgcgcgt tcgggcgccg cgcccgcctg tccgaccagc
     1681 gtcgcgatgg cgcggtccat gctgagatcg gcgccggcca gggtgccgtc ttccagcgtc
     1741 agccggccgt cccggcgcag gatccgccgt ccgcccagcc gcatttcggc agcgtcggtg
     1801 cccgcgaagg ccatgcagtc ggtgaccagg aacagaccct cggcgcgcgc ggccagcgcc
     1861 acccgcatcg cggcggggtg gacatggatg ccatcggcga tcagaccggc atgggcatcg
     1921 cccgccagca ccgccccgac caggccgggg cttcggtggc caagctggct catcgcgttg
     1981 aaaagatgcg tggcgcacgc cgcgcccgcg gcaaaggcgg caccggccgc gtcaagatcg
     2041 caatcgctgt ggccaaggct gacgatggct ccggcgcccg aaagcgccgc aacctgttgc
     2101 gggctgacgc tttcgggcgc cagcgtgacc atcagcgcgg gcagggcgcg cgcagccccg
     2161 cacaaccgcg ccagatcgtc gtcctgcatc ggccggatca gcgcggcgtc atgggcgccc
     2221 ttgcggcgcg ggtccagatg cggaccttcc agatgcagac ccagaaagcc gggaaccccg
     2281 gcgcgcgcgg cctcgatccc ggcggcgatg acggcggcgg tggcctcggg gcggtcggtt
     2341 atcagcgtcg gcaggatacc
//
LOCUS       DTVW01000933            1304 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2149680, whole
            genome shotgun sequence.
ACCESSION   DTVW01000933 DTVW01000000
VERSION     DTVW01000933.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1304)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1304)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1304
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2149680"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1027)
                     /gene="hrcA"
                     /locus_tag="EYO87_12130"
     CDS             complement(<1..1027)
                     /gene="hrcA"
                     /locus_tag="EYO87_12130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heat-inducible transcriptional repressor HrcA"
                     /protein_id="HIC66717.1"
                     /translation="MSQESLLSELNDRSREVFRRVVETYLQTGEPVGSRTLTRALSEQ
                     VSAATVRNVMQDLEFMGLLDSPHASAGRLPSQRGLRLFVDGMMEVDSVAPTDRAAIDQ
                     TLGNDDPDTGLLLDRVSTALSSITRGASLVLMPKHEAPIRHIEFVSLAPDRALVVLVF
                     ADGHVENRIFTPPPGQTPSSMREAGNFLNAMAEGRTLAELRSHMARQIDARRRELDVL
                     AAELVRSGLALWDGEAADPRLIVRGRANLLDREAADLDRIRVLFDDLERKRDIVEFLE
                     LTEQGDGVRIFIGSENKLFSLSGSALVVSPYMNADRKIVGAVGVIGPTRLNYGRIVPI
                     VDYTAQLV"
     gene            1099..>1304
                     /locus_tag="EYO87_12135"
     CDS             1099..>1304
                     /locus_tag="EYO87_12135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005979825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease PH"
                     /protein_id="HIC66718.1"
                     /translation="MRPSGRNLSQMRPISIETGVMRHAEGSCLIRCGNTHVLCSASIE
                     DNPPRFLKGTGLGWVTAEYGMLPRA"
BASE COUNT          249 a          423 c          415 g          217 t
ORIGIN      
        1 cgaccagttg cgcggtgtaa tcgacgatcg gcacgatacg gccataattc agccgcgtcg
       61 gcccgatgac acccaccgcg cccacaatct tacggtcggc attcatatag ggagaaacca
      121 ccagagcgga acccgaaagc gaaaaaagct tgttctcgga gccgatgaaa atgcgcaccc
      181 cgtcgccttg ttcggtcagt tccaggaact ccacgatgtc gcgcttgcgt tcgagatcgt
      241 cgaacagcac ccggatccgg tccagatcgg cggcctcgcg gtccagcagg ttcgcccggc
      301 cacgcacgat caggcgggga tcggcggctt cgccatccca cagcgctagc cccgaccgga
      361 ccagttcggc cgccagcacg tccagttcgc gccgccttgc gtcgatctgg cgggccatgt
      421 ggctgcgcaa ttcggccagc gtgcggccct cggccatggc gttgaggaaa ttgcccgcct
      481 cgcgcatgga ggacggcgtc tggcccggcg gcggcgtgaa gatgcggttc tcgacatggc
      541 cgtcggcaaa gaccagcacc accagcgcgc ggtcgggcgc gaggctgacg aattcgatat
      601 gccggatcgg cgcctcgtgt tttggcatca gcaccagcga ggccccgcgc gtgatcgacg
      661 acagcgcggt gctgacccga tccagcagca ggccggtatc gggatcgtca tttcccagcg
      721 tctggtcgat ggcggcgcga tcggtggggg cgacggaatc gacctccatc atcccgtcca
      781 cgaacagccg caggccacgc tgcgagggca accgcccggc cgaggcgtgg gggctgtcaa
      841 gaagacccat gaattccaga tcctgcatga cattgcgcac cgtcgccgcg ctgacctgtt
      901 cggacagcgc gcgcgtcagc gtccgcgaac ccaccggctc tccggtttgc agataggttt
      961 cgaccacgcg gcggaacacc tcgcgcgagc ggtcgttcaa ttcggatagc agcgattcct
     1021 ggctcatatc ccttgcgggc ttgcgtgacg gggccaacgg gcgttatggg gcagcaatct
     1081 tcagcaaaag gaaaaatcat gcgcccttca ggcaggaatc taagccaaat gcgtccgatt
     1141 tcaatcgaaa ccggcgtgat gcggcatgcc gaggggtcat gcctgatccg ttgcggcaac
     1201 acccatgtcc tgtgcagcgc cagcatcgag gacaatccgc cgcgtttcct gaagggaacc
     1261 ggacttggat gggtgacggc cgaatacggg atgctgccgc gcgc
//
LOCUS       DTVW01000934            1067 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2152683, whole
            genome shotgun sequence.
ACCESSION   DTVW01000934 DTVW01000000
VERSION     DTVW01000934.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1067)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1067)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1067
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2152683"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..485)
                     /locus_tag="EYO87_12140"
     CDS             complement(<1..485)
                     /locus_tag="EYO87_12140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012083680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HIC66719.1"
                     /translation="MATSVEEIKIKETTVPIVFEEGKYIPIVSIQLVFKNAGHLSNTI
                     DGLADVSAKLLNEGTKKDGSIGFATKLDAHAVDLHAGVGRESFVIEISALKSEFAYVV
                     ERLKELIKDPNFTKEALEHVKRQKLGWLQQKKSDFDYISATALRAEVFKGTALAKPYD
                     GT"
     gene            complement(605..>1067)
                     /locus_tag="EYO87_12145"
     CDS             complement(605..>1067)
                     /locus_tag="EYO87_12145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009493839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="dehypoxanthine futalosine cyclase"
                     /protein_id="HIC66720.1"
                     /translation="VKSTATMMYGTVETVREIVEHWDYVRQLQDETGGFRAFIMWSYQ
                     SDHTQLKRELPTITKTTPNQYLRYLAVARLFLDNVPNIQSSWVTQGSYVGQMALLFGA
                     NDLGSTMMEENVVSAAGAKNEMNQEEMIKLIRDVGENPAKRNTAYDILERF"
BASE COUNT          285 a          252 c          189 g          341 t
ORIGIN      
        1 gttccatcat atggcttagc tagcgctgta cctttaaaaa cttcagcacg taaagcagtt
       61 gctgaaatgt agtcgaagtc tgattttttt tgctgtaacc aaccaagctt ttgacgcttc
      121 acatgctcta acgcctcttt cgtaaagtta gggtctttta ttaactcttt caaacgctct
      181 accacataag caaactccga cttcaaggcc gagatttcta tgacaaaact ctcacgtcct
      241 acacctgcgt gtaaatctac cgcatgggca tcaagcttag tagcaaaccc tatggagcca
      301 tctttttttg taccttcatt gagtagtttt gcagacacat ctgccaagcc atctatggtg
      361 ttagacaaat gccctgcatt tttaaatacc aactgaatgg agacaatagg tatatacttc
      421 ccctcttcaa aaacaatggg tacagtagtc tcttttattt ttatctcttc gactgatgtc
      481 gccattgcta atccttgtaa taatagtagt aaaataaata gttttttcat atatttcccg
      541 tagggtgcgt ttgccaacgc accgattgtc atatttttta atgcgttggc aaacgcaccc
      601 tacattaaaa tctctccaaa atgtcataag ccgtattacg cttagcagga ttctctccaa
      661 catcgcgaat aagcttaatc atctcttctt gattcatttc attttttgcc cctgctgcgg
      721 agactacgtt ttcttccatc atggtagacc caaggtcatt ggctccaaaa agcagtgcca
      781 tttgccctac gtatgaaccc tgtgtgaccc atgaactttg tatgtttggt acattgtcca
      841 aaaacagacg tgctactgct aggtaacgca agtactggtt tggagtagtc ttcgtgatgg
      901 taggtagttc tcgtttaagt tgcgtatggt cactttggta cgaccacata ataaacgctc
      961 taaaaccacc cgtctcatct tgaagttgac gcacatagtc ccagtgttca actatctcac
     1021 gtactgtctc tacagtgccg tacatcatag tagcagtaga ctttaca
//
LOCUS       DTVW01000935            2009 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2153383, whole
            genome shotgun sequence.
ACCESSION   DTVW01000935 DTVW01000000
VERSION     DTVW01000935.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2009)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2009)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2009
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2153383"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..407
                     /locus_tag="EYO87_12150"
     CDS             <1..407
                     /locus_tag="EYO87_12150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002811084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="NAD-dependent dehydratase"
                     /protein_id="HIC66721.1"
                     /translation="AIGYPLTVHGTGGQTRAFIHIQDTCRCIELALLNPPAPGDRVSI
                     LNQMTETHRVRDLARMIADQTGVETAFLKNPRNEADENDLHVANDRFLGLGLQPIRLQ
                     DGLLTEVQEIARKYADRCDRDKIPCLSQWRTG"
     gene            complement(507..1325)
                     /locus_tag="EYO87_12155"
     CDS             complement(507..1325)
                     /locus_tag="EYO87_12155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007425265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HIC66722.1"
                     /translation="MPMVYAKDGTEIHVKDWGQGRPVVLIHGWPLNADSWEYQAVKLA
                     EAGFRVISYDRRGFGRSGQPWEGYDYDVLSDDLAAVIETLGLTDAAIVGFSMGGGEVA
                     RYFGRHGGKGVSKAVFISSVAPGMLKSDDNPEGVTRDVFEGIREGLRQDRPAFLAEFF
                     RDFYGQDTETGGVSDAILEWSRDMAMIASPRATLECVNAFGLTDFTADAAQITVPTLV
                     IHGTGDKTVPIAATARRMAKLVPHATLIEYEGAPHGLTATEPDRVVRDLLDFLG"
     gene            complement(1443..1832)
                     /locus_tag="EYO87_12160"
     CDS             complement(1443..1832)
                     /locus_tag="EYO87_12160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005854302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2147 domain-containing protein"
                     /protein_id="HIC66723.1"
                     /translation="MRLVIIAATLAFAMAGTTANADPIEGVWQTQPDEGAFAYVTIKP
                     CGGAFCGDISRTFKDKAEYRSPNLGRRIVIDMAPQGGNTYTGKVWRPANDKIYRGKAS
                     VSGDRMSLSGCVAGGLICKSQTWVRIR"
BASE COUNT          356 a          689 c          621 g          343 t
ORIGIN      
        1 cggcaatcgg atatccgctg acggtccacg gcaccggcgg ccagacccgc gccttcatcc
       61 atattcagga cacctgccgc tgcattgaac tggcgctgct gaatccgccc gcaccgggcg
      121 accgggtcag catcctcaac cagatgaccg agacgcatcg cgttcgcgat ctggcgcgca
      181 tgatcgccga tcagaccggg gtcgagacgg cgttcctgaa aaacccccgc aacgaggccg
      241 acgagaacga tctgcacgtc gccaacgacc gctttctggg cctgggcctg cagccgatcc
      301 ggctgcagga cggcctgctg accgaggtgc aggagatcgc gcgcaaatat gccgaccgct
      361 gcgaccgcga caagattccc tgcctgtcac aatggcggac cggctgaagg cccgcagacc
      421 ccggaaacgg tcgcgcaccc gcgatcctgc cgatcgcgcc gtcctgtcgc cgaggggata
      481 ccgcaacagg gtctgaaccg gtccggtcag ccgagaaaat ccagaagatc gcgcaccacg
      541 cggtcgggct cggtcgccgt cagcccgtgg ggggcgcctt cgtattcgat cagcgtcgca
      601 tgaggaacca gtttcgccat ccgtcgcgcc gtcgccgcga tgggaacggt cttgtcgccg
      661 gtgccgtgga tcaccagcgt cggcaccgtg atctgcgcgg cgtcggcggt aaagtcggtc
      721 aacccgaaag cgttgacgca ttccagcgtg gcacgcgggc tggcgatcat cgccatgtcg
      781 cgcgaccatt ccaggatcgc gtcgctgacg cctcccgtct cggtgtcctg cccgtagaaa
      841 tccctgaaga attcggcaag aaacgccgga cgatcctgac gcagcccctc gcggataccc
      901 tcgaagacat cgcgggtgac accctcggga ttgtcgtcgg atttcagcat tcccggcgcc
      961 acggacgaga tgaagaccgc cttcgacacg ccctttccac catggcggcc gaaatagcgc
     1021 gccacttcgc ccccacccat cgagaagccg acgatggcgg cgtcagtcag gccaagcgtc
     1081 tcgatcacgg ccgccagatc gtccgacagc acgtcgtagt catagccctc ccagggctgg
     1141 cccgagcggc caaagccgcg ccggtcatag ctgatcacgc ggaaacctgc ctcggccagt
     1201 ttcacggcct ggtattccca gctatccgcg ttcagcggcc agccatggat cagcacgacc
     1261 ggccggccct gaccccagtc cttgacatgg atctctgttc cgtccttggc atagaccatc
     1321 ggcatttcgc gttcctttcg gttccaggat tccaagatcc ccttccctca ccgaacgcag
     1381 atgcgcggac agggttgccc cccgtccgcg tttctctttg ccaagcgacc gaaacggtgc
     1441 gatcagcgga tccgcaccca ggtctgcgat ttgcagatca ggccgcccgc gacgcagccc
     1501 gacaggctca tcctgtcgcc cgagacgctg gccttgccgc ggtagatctt gtcattggcc
     1561 ggccgccata ccttgccggt gtaggtgttg ccgccctgcg gggccatgtc gatgacgatc
     1621 cggcggccga gattgggcga tctgtattcg gccttgtcct tgaaggtgcg gctgatatcg
     1681 ccgcagaagg cgccgccgca gggcttgatc gtcacatagg caaaggcgcc ctcgtcgggc
     1741 tgggtctgcc agacgccctc gatcgggtcg gcattggcgg tggtgccggc catggcgaag
     1801 gccagcgtgg cggcaatgat cacaaggcgc atcgtttctc ctcccaaggg atgctgtcgg
     1861 ggctacagtg ccgcccggtc aggttccggg caagcgtgac gttgggaccg gggctttccc
     1921 ttgccctcgg gtcatggcaa agggcgggcg aaggacagac cgaagggcca gccatgatcc
     1981 tctatcccgc catcgacctg aaggacggc
//
LOCUS       DTVW01000936            1295 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2154596, whole
            genome shotgun sequence.
ACCESSION   DTVW01000936 DTVW01000000
VERSION     DTVW01000936.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1295)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1295)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1295
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2154596"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..512
                     /locus_tag="EYO87_12165"
     CDS             <1..512
                     /locus_tag="EYO87_12165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018444099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="FAD/NAD(P)-binding oxidoreductase"
                     /protein_id="HIC66724.1"
                     /translation="CDRFAVAGDGGGIAGAEAAAVAGQLAALDAACRQGTIDEAARDR
                     SAAPLIRQMARFLAIRPLLDTLFRPDPGICVPRDDATLVCRCEEVTAGDIRVAVAEGA
                     MGPNQIKAFIRCGMGPCQGRMCGLPVAEIIAAERSATMAETGFFRVRPPIKPLTLHEL
                     AALAGDEPH"
     gene            545..>1295
                     /locus_tag="EYO87_12170"
     CDS             545..>1295
                     /locus_tag="EYO87_12170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008390959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long-chain fatty acid--CoA ligase"
                     /protein_id="HIC66725.1"
                     /translation="MTKLFNLGDLVDRSRDPGKIALIDLGDNAREYSHGELDRAANAV
                     ARGLRARGLAVGDRVAILSANRAAFLTAYFGVMRAGMVAVPVNYKFPAPTIAYILRDA
                     EIKLVFADAQRADSVPQDMPLVIFGAKFDAFVDAGEFESVVPADDVAMFLYTSGSTGR
                     PKGVPLTHRGHLWVVDTRVAALDRRDHRVLVAAPLYHMNALAVSKFAIAAHLTIILMP
                     QFTAPGYIAAIAAHRATWLTSVPTILAMVARE"
BASE COUNT          213 a          430 c          423 g          229 t
ORIGIN      
        1 attgcgacag gttcgctgtt gccggcgatg gcggcggcat cgccggcgcg gaggccgccg
       61 ccgtggccgg acaattggcg gcgctcgacg cggcgtgccg ccagggcacc atcgacgagg
      121 cggcgcgcga ccgcagtgcc gcaccactga tccgccagat ggcgcgcttt ctggcgatcc
      181 gacccctgct cgataccctg ttccggcccg accccggaat ttgcgtgccg cgcgacgacg
      241 cgaccctggt gtgccgctgc gaggaagtca ccgccggcga tatccgcgtt gcggtggcgg
      301 aaggtgcgat ggggccgaac cagatcaagg ccttcattcg atgcggcatg ggcccctgcc
      361 agggccggat gtgcggtctg ccggttgccg aaatcatcgc cgccgaacgt agtgcgacca
      421 tggccgaaac cggattcttc cgagttcggc cgccgatcaa accgctgacc ttgcacgaac
      481 tggcggcgct ggccggcgat gaaccccatt gactttgggg atgctggacg gaaggctggc
      541 gggcatgacg aagcttttca atctgggcga tctggtcgac cgcagccggg atccgggtaa
      601 aatcgcactc atcgatcttg gcgataatgc gcgcgaatac agccacggcg aacttgaccg
      661 ggccgccaat gcggtggcgc ggggattgcg ggcgcgcggg ctggccgtgg gcgaccgggt
      721 cgccatcctg tcggccaacc gggccgcgtt cctgaccgcc tatttcggcg tcatgcgcgc
      781 cgggatggtc gcggttccgg tcaattacaa atttcccgca ccgaccatcg cctatatcct
      841 gcgcgacgcc gaaataaaac ttgtcttcgc cgatgcgcag cgcgccgaca gcgtcccgca
      901 agacatgccg ctggtcatct tcggcgcaaa gttcgacgct ttcgtggatg ctggcgaatt
      961 cgagagcgta gtgccagccg acgacgttgc gatgttcctc tatacttcgg gatcgaccgg
     1021 ccggcccaaa ggggtgccgc tgacccatcg cggccatctt tgggtcgtcg atacccgggt
     1081 cgcagcactg gatcggcgcg atcaccgggt actggttgcc gcacccctgt atcacatgaa
     1141 cgcgctggcg gtcagcaagt tcgccatcgc cgcccatctc accataatcc tgatgccaca
     1201 attcaccgcg cccggctata tcgccgccat tgcggcccac cgcgcgacct ggctgacgtc
     1261 ggtgccgacc attctggcga tggtggcgcg cgaac
//
LOCUS       DTVW01000937            3447 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2156469, whole
            genome shotgun sequence.
ACCESSION   DTVW01000937 DTVW01000000
VERSION     DTVW01000937.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3447)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3447)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3447
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2156469"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..330)
                     /locus_tag="EYO87_12175"
     CDS             complement(<1..330)
                     /locus_tag="EYO87_12175"
                     /EC_number="1.1.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007118396.1"
                     /note="NADP-dependent; catalyzes the oxidative
                     decarboxylation of malate to form pyruvate; decarboxylates
                     oxaloacetate; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent malic enzyme"
                     /protein_id="HIC66726.1"
                     /translation="MSDKTRRSRITPEEALAYHMEPYPGKYDIVASTPMTTQRDLSLA
                     YSPGVAVPVQAIADHPETAYDYTTKGNMVAVISNGTAILGMGNLGALASKPVMEGKAV
                     LFKKFAGI"
     gene            471..1460
                     /locus_tag="EYO87_12180"
     CDS             471..1460
                     /locus_tag="EYO87_12180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66727.1"
                     /translation="MARKIIVHIGQPKTGTTSLQAALLKGQKHLLDQGILYPTPLFSI
                     NHGALVLPFRQEVQRSMMRFVGTDIREARRRGRIYWRSVVEEAAMHDVGTVIISSEFI
                     WGLRHLPKFYENLQTAFGSEAAIELVAYLRTPSQHYISAAQQKLKMDHRLPIFRYSRL
                     KRLKEVSDIAPLKLGKFSRDALHEGDILSDFCLRYNIKTANLRHRKKEANTTISAEGM
                     ILLQTYRRRNHSERGDMPTDDTNRLLNAIAREEAANPGIYTRPKLRPEFAQYLDRDCQ
                     TFAWLRKAHGIDLHQDHGVAEGMMRDVAEAEDVSELVGFDPDALHRLRQAVLS"
     gene            complement(1500..2225)
                     /locus_tag="EYO87_12185"
     CDS             complement(1500..2225)
                     /locus_tag="EYO87_12185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase"
                     /protein_id="HIC66728.1"
                     /translation="MTYCVGLKLNAGLVLLSDTRTNAGLDNIACYRKMFFFEEPGERV
                     VAIMTAGSLSVTQTALARLDEAIEDEMADETTSILKAPTMLQVATIIGDTLARTRREI
                     AEQCRDLRQQASASMIVAGQRKGGDMRMFLIYPEGNFIEATEDTPFLQIGEHKYGKPI
                     LDRVVTPATSLGDAQKAVLLSMDSTLRSNLSVGMPLDLAIIEKDACTISARRRILEGD
                     QDFMEMSAAWSAALRDSFVKVSL"
     gene            2408..>3447
                     /locus_tag="EYO87_12190"
     CDS             2408..>3447
                     /locus_tag="EYO87_12190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009179251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocation signal
                     domain-containing protein"
                     /protein_id="HIC66729.1"
                     /translation="MSLFALTRRHFLQASTAGIGAAMLHPFAARASAGQAHLRIMETT
                     DLHVHVWPYDYYADKPVDTVGAARTAALIRAVRDEAGNSVLLDNGDILQGNPMGDYVA
                     YERGMKPDEMHPIITAMNEVGVEAGTLGNHEFNYGLDFLKNALAGAGFPVVCANVATR
                     ADEDPAADDTLVPPYVVLDRELTDGAGQPHPIRLGIIGFVPPQIMQWDRKHLEGRVTA
                     RDIVEAARAWVPKLRGEGVDLVVALCHSGIGAATHEPGMENAAIPLAGVEGIDVILTG
                     HQHLVFPGPDFEDTEGVDIAAGTIAGKPGVMAGFWGSHMGLVDLLLERQGDGWAVIEH
                     SVEARPIYQRDT"
BASE COUNT          660 a         1054 c         1070 g          663 t
ORIGIN      
        1 gatgccagcg aacttcttga acagcaccgc cttgccctcc atcaccggct tgctggccag
       61 cgcacccagg tttcccatcc ccaaaatcgc cgtcccgttc gagatgacgg cgaccatgtt
      121 gcccttggtg gtgtagtcat aggccgtctc ggggtggtcg gcgatggcct gcaccggcac
      181 ggcgacgccg ggcgaatagg ccagcgacag atcgcgttgc gtcgtcatcg gggtcgaggc
      241 gacgatgtcg tatttgcccg gataaggctc catgtgatag gccagcgcct cttccggcgt
      301 gatccggctg cggcgtgtct tgtcgctcat ggtgttcccc ttccgtcgcg gcgtcgaacc
      361 tgattacagc ggccgggctc tcgtctcaat ctgttcggac ggcccgccat cgtgttgaca
      421 cgctgtcaag acccgccatt gtcgggcggt gtatctgacg gggacaagtc ttggctagga
      481 aaatcatcgt tcatattggg cagccgaaaa ccggcacgac cagtttgcag gctgctcttc
      541 tcaaaggaca aaagcatctc ctcgatcagg ggattctgta tccgacgcca cttttttcca
      601 tcaaccacgg cgctctggtt ctgcctttca ggcaggaggt tcagcgttcc atgatgagat
      661 ttgttggaac agatatccgg gaggcgagaa gaagaggtcg catctactgg aggagtgtcg
      721 tcgaagaggc cgccatgcac gacgttggca ccgtcataat ttccagcgaa ttcatttggg
      781 ggttgagaca tctgccaaaa ttctatgaaa atttgcaaac ggcctttgga agcgaagcag
      841 cgatcgaact ggtggcctat cttcgcaccc cgtcccaaca ttatatctcg gcggcgcaac
      901 agaagctgaa gatggatcac cgattgccga tcttcagata tagccgcctg aaacggctca
      961 aggaggtttc ggatattgct ccgctgaaac ttggcaagtt ttcacgcgat gcgctgcatg
     1021 aaggcgatat tttgtctgac ttctgcttga gatataatat aaaaacggcc aatctgcgcc
     1081 accgtaaaaa agaggcaaac acgacgattt cggccgaagg gatgatcctt ctgcaaacat
     1141 atcggcgtag aaatcattcc gaaaggggcg atatgccgac cgatgacact aatcggctgt
     1201 tgaatgcgat cgctcgggaa gaggcggcga accccggaat ctatacgcgc ccgaaactcc
     1261 gaccggaatt cgcgcaatat ctcgaccggg attgtcagac attcgcgtgg cttcggaagg
     1321 cacacggcat cgacttgcat caagatcatg gcgtcgcgga gggcatgatg cgcgacgtgg
     1381 ccgaggccga agacgtatcg gaactggtcg gtttcgatcc cgatgcgttg caccgcctgc
     1441 ggcaggcggt gctgtcgtga cggcgggatc gggcgtccca agtctccgaa tctcgaaaat
     1501 tacagcgaga ccttcacgaa actgtcgcgc agggcggcgg accaggcggc gctcatttcc
     1561 atgaagtcct gatcgccctc caggatccgg cgtctggccg agatcgtgca ggcatccttt
     1621 tcgatgatcg ccagatccag cggcatcccg accgacaggt tcgagcgcag cgtcgaatcc
     1681 atcgacagca gcaccgcctt ttgcgcatcg cccaggctgg tcgccggcgt caccacgcgg
     1741 tccaggatcg gcttgccgta tttgtgttcg ccgatttgca ggaagggcgt gtcttcggtc
     1801 gcctcgatga aattgccctc gggatagatc aggaacatcc gcatgtcgcc gcccttgcgc
     1861 tggcccgcga cgatcatgct ggcgctggcc tgctggcgca ggtcgcggca ttgttcggcg
     1921 atctcgcgcc gcgtgcgcgc cagcgtgtcg ccgatgatcg tggcgacctg caacatcgtc
     1981 ggcgccttca ggatcgaggt cgtctcatcg gccatctcgt cctcgatcgc ctcgtccaga
     2041 cgtgccaacg ccgtctgggt caccgacagc gatccggcgg tcatgatcgc cacgacacgc
     2101 tcgcccggct cctcgaagaa gaacatcttg cgatagcagg cgatgttgtc cagcccggca
     2161 ttggtgcgcg tgtccgacag caggaccagc ccggcattga gtttgagacc gacacaatag
     2221 gtcatgggaa gcagctaccc cggaatttct ggccgcatcc taggcgggac cggcaggggc
     2281 cgcaatcgcc cgtcgcgccg cgtccgggca ctgatgcatg acagccgcac gacatgtcgc
     2341 ggcgatggct cgcatccagc gccaaaaacg cgcatgatcg cctggtgcaa cccgatcgga
     2401 gcccgtcatg tccctgttcg ccctgacccg ccgtcacttc ctgcaagcct cgaccgccgg
     2461 gatcggcgcg gcgatgctgc atcctttcgc ggcccgcgct tcggccgggc aggcccatct
     2521 gcggatcatg gagaccaccg atctgcatgt ccatgtctgg ccctatgact actatgccga
     2581 caagccggtc gataccgtcg gcgcggcgcg aacggcggcg ttgatccggg cagtgcggga
     2641 cgaggcgggc aattcggtgc tgctggacaa cggcgatatc ctgcaaggca acccgatggg
     2701 cgattatgtc gcctatgaac gcgggatgaa gcccgacgag atgcatccca tcatcaccgc
     2761 catgaacgaa gtcggcgtcg aggcgggaac gctgggcaac cacgaattca attacgggct
     2821 cgatttcctg aagaacgcgc tggcaggggc gggctttccc gtcgtctgcg ccaatgtcgc
     2881 gacccgggcg gacgaggatc ccgccgccga tgacaccctg gtcccgccct atgtggttct
     2941 ggaccgcgaa ctgacggatg gcgccgggca gccgcatccg atccggctgg gcatcatcgg
     3001 cttcgtcccg ccccagatca tgcaatggga tcgcaagcat ctggagggca gggtgaccgc
     3061 ccgcgacatc gtcgaggcag cgcgggcctg ggtgccgaag ctgcgcggcg agggtgtcga
     3121 tctggtcgtc gcgctgtgcc attccggcat cggcgcggcc acgcacgagc cggggatgga
     3181 aaacgccgcc attccgctgg ccggcgtcga gggcatcgac gtgatcctga ccggccatca
     3241 gcacctggtc tttcccggcc ccgatttcga agacaccgaa ggcgtggaca tcgccgccgg
     3301 caccatcgcc ggcaaacccg gggtgatggc ggggttctgg gggtcgcata tgggtctggt
     3361 cgatctgctg ctggaacggc agggcgacgg ctgggcggtg atcgaacaca gtgtcgaggc
     3421 gcggcccatc tatcaacgcg acacgga
//
LOCUS       DTVW01000938            1810 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2160418, whole
            genome shotgun sequence.
ACCESSION   DTVW01000938 DTVW01000000
VERSION     DTVW01000938.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1810)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1810)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1810
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2160418"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..628)
                     /locus_tag="EYO87_12195"
     CDS             complement(<1..628)
                     /locus_tag="EYO87_12195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_353175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease subunit"
                     /protein_id="HIC66730.1"
                     /translation="MGGLLALSRGIDRVNTLIGRSASWLILLAIFVSATNAVVRKMFS
                     ISSNAWLELQWYLYGGAFLLAAAYTLLENEHIRIDIIYGAWSRRVQHWIDLLGTIFFL
                     MPVVLVALYYMYPWLLRSINSGEVSMNAGGLILWPAKSLLFAGFVLLLFQGLSEIIKK
                     IAVMRGVIPDPFPDAGHHVPLEMDPGLIDQAGFADPDHPLTDLPKDGSG"
     gene            complement(738..1499)
                     /locus_tag="EYO87_12200"
     CDS             complement(738..1499)
                     /locus_tag="EYO87_12200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011747884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylcobinamide-GDP ribazoletransferase"
                     /protein_id="HIC66731.1"
                     /translation="MTAWQPSPRPGLARLHQLVLALVFLTRLPLARLLPGHPMTLGAG
                     AWAFPLAGALVGALASVPLLLVQPPLLAAGLSLALSVCLTGALHEDALADFADAHGGG
                     DREARLRIMRDSRIGSYGVMALIVTSLLRVAALAVLGPAALIASAAGGRAAIVVAMRM
                     LPPARPDGLGRAAGRPGHGALAAALLIALAALLPAGRDAVPALALGAAAAGLTMRRAQ
                     NLINGQSGDVLGTVSVLTETAMMTGFAMTAPAALF"
     gene            complement(1459..>1810)
                     /locus_tag="EYO87_12205"
     CDS             complement(1459..>1810)
                     /locus_tag="EYO87_12205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010398353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="nicotinate-nucleotide--dimethylbenzimidazole
                     phosphoribosyltransferase"
                     /protein_id="HIC66732.1"
                     /translation="ADALAAFGGREQAALCGAILRARELGLPVILDGFICTAAAAVLT
                     RDDPDALSHCLSGHESAEPGHRRLIAALGLRPILSLDMRLGEGSGAAVALMVLRGALA
                     CHDGMATFSEAGIG"
BASE COUNT          347 a          643 c          594 g          226 t
ORIGIN      
        1 ggcccgagcc gtccttcggc aggtccgtca gcggatggtc cggatccgca aatccggcct
       61 ggtcgatcag gccggggtcc atctccagcg gcacgtgatg gccggcatcg gggaagggat
      121 cggggatcac gccgcgcatg acggcgatct tcttgatgat ctcggacaga ccctgaaaca
      181 gcaacagcac gaaacccgcg aacaacagcg acttggccgg ccacaggatc agcccgcccg
      241 cgttcatcga cacctcgccc gagttgatgc tgcgcaggag ccagggatac atgtagtaaa
      301 gcgcgaccag aacgaccggc atcagaaaga agatcgtgcc gagaaggtcg atccagtgct
      361 gaacccgccg cgaccaggcg ccatagatga tgtcgatgcg gatatgttcg ttttccagca
      421 gcgtataggc cgccgccagc aggaatgcgc cgccatagag ataccattgc aattccagcc
      481 aggcattcga cgaaatgctg aacatcttgc gcacgaccgc gttggtcgcg ctgacgaaga
      541 tcgccagcag gatcagccac gatgcactgc gcccgatcag cgtgttgacg cggtcgatgc
      601 cgcgcgacag ggccagtagg ccgcccattg aactatcctc cctcacatcg ccgccgcagg
      661 ggcgacgagg ccggtttctc cgaccggtct gcagatcggg ttccatatgc gcgaagggcc
      721 caaaggggtc aaggatttca gaacagggcc gcgggggcag tcatggcaaa gccggtcatc
      781 atcgcggtct cggtcaggac ggaaaccgtt cccagcacgt cgccgctttg cccattgatc
      841 aggttttggg cccgccgcat ggtcaggccc gccgccgcgg cgcccagggc cagcgccggg
      901 accgcatcgc ggccggccgg cagcagggcg gccagggcga tcagcaatgc ggcggccagc
      961 gcgccgtgcc ccggccgccc ggctgcgcgg cccagcccat cgggacgcgc gggcggcaac
     1021 atccgcatcg cgacgacgat cgcggcccgc ccgcccgccg ccgaggcaat cagcgccgcc
     1081 gggccaagca cggccagcgc cgcgacccgc aaaagcgatg tcacgatcag cgccatcacg
     1141 ccatagctgc cgatccgcga atcgcgcatg atccgcagac gggcctcgcg atccccaccg
     1201 ccatgggcat cggcaaaatc ggccagtgca tcctcgtgca gcgccccggt caggcagacc
     1261 gacagcgcca gcgacaggcc ggccgccagc agcggcggct ggaccagaag cagcggcacc
     1321 gaggccagcg ccccgaccag cgcgccggcc agcggaaagg cccatgcgcc ggcccccagg
     1381 gtcatgggat ggcccggcag caggcgtgcc agcggcaggc gcgtcaggaa gaccagcgcc
     1441 agtaccagct gatgcagcct agccaatccc ggcctcggag aaggttgcca tgccgtcatg
     1501 gcaggcgagg gcaccgcgca gcaccatcag cgccaccgcc gcgcccgatc cctcgcccag
     1561 gcgcatgtcc agcgacagga tcggacgcag gccaagcgcg gcgatcaggc ggcggtggcc
     1621 cggttcggcg ctttcatgtc cactcaggca atggctcagc gcgtccggat cgtcacgggt
     1681 cagcaccgct gcggcggccg tgcagatgaa cccgtccaga atcaccggca ggcccagttc
     1741 acgcgcgcgc aggatggcgc cgcaaagcgc cgcctgttcg cgtcctccga acgccgccaa
     1801 tgcgtcggcc
//
LOCUS       DTVW01000939            1253 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2163620, whole
            genome shotgun sequence.
ACCESSION   DTVW01000939 DTVW01000000
VERSION     DTVW01000939.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1253)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1253)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1253
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2163620"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..242)
                     /locus_tag="EYO87_12210"
     CDS             complement(<1..242)
                     /locus_tag="EYO87_12210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011568133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthetase"
                     /protein_id="HIC66733.1"
                     /translation="MARYIFITGGVVSSLGKGLASAALGALLQARGFTVRLRKLDPYL
                     NVDPGTMSPFEHGEVFVTDDGAETDLDLGHYERFTGV"
     gene            complement(395..982)
                     /gene="secG"
                     /locus_tag="EYO87_12215"
     CDS             complement(395..982)
                     /gene="secG"
                     /locus_tag="EYO87_12215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002720531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="HIC66734.1"
                     /translation="MQNVLLTIHLILAVLLTGVVLLQRSEGGGLGMGGGGGGTGVMTG
                     RQAANALTRLTWIFGIAIFVTSIGLTIIAAQQGSGGSIMDQLGATNEQPAPDQNLPDL
                     PAYTPPPVTGGDPLTPPAPDAPATQAPATQAPATQAPAASTQAPAAEPVTPPAAQAPA
                     PETGAGQAVAPEAPTTEAVPAGDAPADPAGTKPSN"
     gene            1055..>1253
                     /locus_tag="EYO87_12220"
     CDS             1055..>1253
                     /locus_tag="EYO87_12220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_353875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobyric acid synthase CobQ"
                     /protein_id="HIC66735.1"
                     /translation="MPALMIQGTGSNVGKSMLVAGLCRAARRRGLSVAPFKPQNMSNN
                     AAVTLDGGEIGRAQALQARACG"
BASE COUNT          185 a          403 c          455 g          210 t
ORIGIN      
        1 accccggtaa agcgttcgta atggcccaga tccagatcgg tctcggcgcc gtcatcggtg
       61 acgaagacct cgccgtgctc gaacgggctc atcgtccccg gatcgacgtt caggtatggg
      121 tccagcttgc gcaggcggac ggtaaacccg cgcgcttgca aaagcgcgcc caacgccgcc
      181 gaggcgaggc ccttgccaag ggacgaaacc acgccgccgg tgatgaagat gtaacgcgcc
      241 atgaggcccc cgtgatgtgc cggaatcgtt gttctgcggg ccgccgaact gccggcacca
      301 cgggacttga gatatagtcg attcgccccg tggccgcaac ggaccgcaag ttgatgtggg
      361 gcagattttc tctgccccta gttgttgtgt gaccttaatt cgacggtttt gtcccggccg
      421 ggtcggccgg ggcatcgccg gcgggcaccg cctctgtcgt gggcgcctct ggcgcgacag
      481 cctggcctgc gccggtttcg ggggccggcg cctgggctgc gggcggcgtt accggctcgg
      541 ccgcgggcgc ctgggtggac gcggcgggcg cctgggtggc gggcgcctgg gttgcgggcg
      601 cctgggttgc gggcgcatcg ggcgcgggcg gcgtcagcgg atcgcctccg gtcaccggcg
      661 ggggcgtgta ggccggcaga tcgggaagat tctggtccgg ggcgggctgt tcgttcgtcg
      721 cgccaagctg atccatgatc gatccaccgg atccctgctg cgcggcgatg atcgtcaggc
      781 cgatcgaggt cacgaagatc gcgattccga agatccaggt caggcgggtc aacgcgttcg
      841 cggcctgccg gccggtcatc acgccggtgc ctcctccgcc gccgcccatg cccagcccgc
      901 cgccttcgga tcgctgcaac aacacgacac cggtcagcag caccgccagg atcaggtgga
      961 tggtcaacag gacgttttgc acggaattcg acctttcact ttcggacgcg cctatctagt
     1021 cacccatgat ggtgaaggca agcagggtgt ccggatgccg gcattgatga tccagggcac
     1081 gggctcgaac gtgggcaagt cgatgctggt cgcggggctg tgccgcgcgg cgcggcggcg
     1141 cggcttgtcg gtcgcgccat tcaagccgca gaacatgtcg aacaacgccg ccgtgacgct
     1201 ggacgggggc gagatcggcc gggcgcaggc cctgcaggcg cgcgcctgcg ggc
//
LOCUS       DTVW01000940            3995 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2164652, whole
            genome shotgun sequence.
ACCESSION   DTVW01000940 DTVW01000000
VERSION     DTVW01000940.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3995)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3995)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3995
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2164652"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..346)
                     /locus_tag="EYO87_12225"
     CDS             complement(<1..346)
                     /locus_tag="EYO87_12225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_356526.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HIC66736.1"
                     /translation="MKKIGFLSFGHWAPEPGSQVRSASDVLLQSIDLAVEAEKLGLDG
                     AYFRVHHYARQLASPFPLLAAIGARTSTIEIGTGVIDMRYENPLYMVEDAGSADLIAG
                     GRLQLGISRGSPE"
     gene            complement(461..1333)
                     /locus_tag="EYO87_12230"
     CDS             complement(461..1333)
                     /locus_tag="EYO87_12230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013067857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lauroyl acyltransferase"
                     /protein_id="HIC66737.1"
                     /translation="MSDDDRTSFTDRLANAAFLAVMAAARLLPYDRRIPVMGWVFAHL
                     LAPVAGWRRRIRDNLALARPDLDHEAVEILVRAVPENTGRSLAEIYSGDAFTARIRAS
                     DPLEGPGLPALETAFETGRPVIIACAHFGNYDAMRAALAGRGWPVGALYRPMNNDAFN
                     RHYVPTISAIAEPLFPRGRGGLAAMLRFLKGGGWLALGFDQHDRHAPELRFFDLPART
                     VLTPAELAIRYDALILPVHGIRQPDGLSFRVHVGEPLEKAAPDRMMQALNDDLEMLVR
                     RHMDQWFWVHRRWK"
     gene            complement(1330..2223)
                     /locus_tag="EYO87_12235"
     CDS             complement(1330..2223)
                     /locus_tag="EYO87_12235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011455764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HIC66738.1"
                     /translation="MARERDGPRQPRPAQTAGIVFLLAAIIGFTLMDATAKHLTRTYP
                     PAQIVWARFLGNLLIFLAIFRGRVFVLMRSRQPGLQLARAGMQLASVGLFFTALQFIG
                     LAEATAIMDLNPVLITLGAALFLGEAIGPRRIAGIAAALIGALIIIRPGLGVFQPAAL
                     LPLAGAFTYAAGALLTRIVRADSVATSVLWSAVLGTVATSALVPFFWLPVAAGDLSAF
                     AALALFGTASQYFLVRAFTVAEAGVLAPFGYTGLVWAGFWGWLFFGQLPDRWTVAGAA
                     LIVGAGLYVWSREAGAARKDR"
     gene            complement(2342..>3995)
                     /locus_tag="EYO87_12240"
     CDS             complement(2342..>3995)
                     /locus_tag="EYO87_12240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012566997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HIC66739.1"
                     /translation="GPLGQGIANDVGMALAELIIAARFGDDIVNHRTWVIAGDGDLME
                     GVSHEASSLAGHLGLAKLIVLFDDNHISIDGATALSVSDDQLTRFTAYGWDVFAVDGH
                     NADAVATAIEAAIATDRPSLIACRTTIGYGAPTKAGTAATHGAALGEDEVAGARKKLG
                     WPHPPFQVPNAVATAWREAGGRGAAPRAAWTDRLAALDADTRAEFERAINGRLPDGWR
                     QAIAEHKRELFELKPARATRESSGAVLEALTKSVPEMIGGSADLTGSVNTRSKTFTAV
                     EADDFSGRYINWGVREHGMAAAMNGIWLHGGFRPYGGTFLTFTDYARGAIRLSALMGL
                     PVIYVMTHDSIGLGEDGPTHQPVEHLAIARATPNILTLRPCDQVETAEAWELALTQTA
                     RPTIMALSRQGLQALRTSHQDENLSARGAYVLREASGGKPAVVLMASGSEVEIAATAR
                     DTLEAEGTPARVVSVPSMELFRDQPSAYREEVLPAGTVRVAIEAAVRQPWDWLLLGER
                     GREEKSDFVGMTGFGASGPAPALYKEFGITADNVVARVKAML"
BASE COUNT          722 a         1356 c         1318 g          599 t
ORIGIN      
        1 gttcgggcga gccgcggctg atccccagtt gcagccgccc gcccgcgatc agatccgccg
       61 agccggcatc ctcgaccata taaagcgggt tttcatagcg catgtcgatc acgccggtgc
      121 cgatctcgat cgtcgatgtc cgcgcaccga tcgcagccag cagcggaaag ggcgaggcca
      181 gttgccgcgc ataatggtgg acgcgaaaat aggccccgtc gaggcccagt ttttccgcct
      241 cgacggccag atcgatggat tgcagcagga catcgctggc cgaacgcacc tgcgagccgg
      301 gctcgggcgc ccaatgcccg aaggacagga aaccgatctt tttcatggat aatcctttct
      361 cgcgaccgtc atgccgcgcg cttctgccgg cagatatggt cggcctgcac ggcaggcaat
      421 gccggttcgc gcacatcggc tgtgcgctgt cgcaggggct tcatttccag cgccggtgca
      481 cccagaacca ttgatccata tgccggcgga ccagcatttc cagatcgtca ttcagggcct
      541 gcatcatccg gtccggagcg gccttttcca gcggttcgcc aacatggaca cggaaggaca
      601 gaccatcggg ctgccggata ccgtggaccg gcaggatcag cgcgtcatag cggatcgcca
      661 actcggccgg ggtcagcacg gtcctggccg gcaggtcgaa gaagcgcagt tccggcgcgt
      721 gccggtcatg ttggtcaaag cccagggcca gccagccgcc gcccttgaga aagcgcagca
      781 tcgcggccag cccgccacgc ccgcgcggaa acagcggttc ggcgatggcg ctgatggtgg
      841 gcacatagtg acggttgaac gcatcgttgt tcatcgggcg ataaagcgcg ccgaccggcc
      901 agccgcgacc ggcgagggcg gcgcgcatgg cgtcgtaatt gccgaaatgc gcgcaggcga
      961 tgatgaccgg tcgcccggtc tcgaacgccg tctccagcgc cggcaggccc ggaccctcca
     1021 gcggatccga ggcgcgtatc cgggcagtga aggcgtcgcc ggaatagatc tcggccagcg
     1081 accggccggt gttctccggc acggcccgga ccaggatttc gaccgcctcg tgatccagat
     1141 cgggcctggc cagcgccaga ttgtcgcgaa tccgccgccg ccagcccgcg accggggcca
     1201 gaagatgggc gaacacccag cccatcaccg gtatcctgcg atcatagggc agcagccgcg
     1261 ccgccgccat caccgccaga aaggcggcgt tcgccaggcg gtcggtgaag gatgtcctgt
     1321 cgtcgtcgct catcggtcct tccgggcggc accggcctcg cgcgaccaaa cgtagaggcc
     1381 cgcgccgacg ataagcgcag cgcccgcgac ggtccagcga tccggcaatt gtccgaagaa
     1441 cagccagccc cagaatcccg cccagacaag accggtatag ccgaacggag ccagaacgcc
     1501 ggcctcggca acggtgaagg cacgcaccag gaaatactgg ctggcggtgc cgaacagcgc
     1561 cagcgccgcg aaggccgaca gatcgcccgc cgcgaccgga agccagaaga acggcaccag
     1621 cgccgaggtc gccaccgtgc ccagaaccgc cgaccacagc accgaggtcg ccaccgaatc
     1681 cgcccggacg atccttgtca gcagcgcccc cgccgcatag gtgaaggcac cggccagcgg
     1741 cagcagggcc gcgggctgga acacgccaag gcccggccgg atgatgatca gcgccccgat
     1801 cagcgccgca gcgatgccgg cgatccggcg cggcccgatc gcctcgccca gaaacagcgc
     1861 cgcacccagc gtgatcagga ccgggttcag atccatgatc gccgtcgcct cggccagccc
     1921 gatgaattgc agcgcggtga agaacaaccc gaccgaggca agctgcatcc ccgcgcgcgc
     1981 cagttgcagg cccggctggc gcgaccgcat caaaacgaag acccgtccgc gaaagatcgc
     2041 cagaaagatc agaagatttc ccagaaatcg tgcccagacg atctgtgccg gaggataggt
     2101 tcgggtcaga tgcttggcgg tcgcgtccat cagcgtgaaa ccgatgatcg cggccagaag
     2161 aaagacgatt cccgccgtct gtgcgggccg cggctggcga gggccgtcac gttcgcgcgc
     2221 catcagcgcg aaggcccgcg ccaggactcg catcagctgt gggcgtcatg ggtatttgag
     2281 caacgaagaa gcggcggctt ctctgttgtc caaatcccct cgccgaaggc gaaatgtcgc
     2341 ctcacagcat cgccttcacc ctggccacga cattgtcggc ggtgatcccg aattccttgt
     2401 agagcgcggg tgcgggcccc gaggcgccaa agcccgtcat gccgacgaaa tctgatttct
     2461 cctcgcggcc acgttcgccc agcagcagcc agtcccaggg ctggcgcacc gcggcctcga
     2521 tcgcgacgcg cacggtgccg gccggcagaa cctcttcgcg ataggcggag ggttgatcgc
     2581 ggaacaattc catcgaggga accgagacga cgcgggcggg tgtgccctcg gcctccagcg
     2641 tgtcgcgggc ggtcgccgcg atctcgacct cggagcccga tgccatcagc accaccgcgg
     2701 gtttcccgcc cgaagcctcg cgcagcacat aggcccccct ggccgacagg ttctcgtcct
     2761 gatggctggt gcgcagggcc tgaagtccct gccgcgacag cgccatgatc gtggggcggg
     2821 cggtctgcgt cagggccagt tcccaggcct ccgcggtctc gacctgatcg cagggtcgca
     2881 gggtcaggat gttcggcgtc gcgcgcgcga tggccagatg ttcgaccggc tggtgggtcg
     2941 gcccgtcctc gcccaggccg atgctgtcat gggtcatgac atagatgacg ggcaggccca
     3001 tcagcgccga caggcggatc gcgccgcggg cgtaatcggt gaaggtcagg aaggtgccgc
     3061 cataggggcg aaagccacca tgcagccaga tcccgttcat cgccgccgcc atgccgtgct
     3121 cgcgcacccc ccagttaatg tagcggcccg aaaagtcgtc tgcctcgacg gcggtgaacg
     3181 tcttggaacg ggtgttgacg gatccggtca ggtcggccga tccaccgatc atctctggca
     3241 ccgatttggt gagcgcttcg agcaccgcgc ccgacgactc gcgtgtcgcc cgcgctggct
     3301 ttaattcgaa caactcacgc ttgtgctcgg cgatggcttg gcgccagcca tcgggcagtc
     3361 gcccattgat ggcacgctcg aactcggcgc gagtgtcagc atcgagggcg gcgagacggt
     3421 cggtccatgc ggcgcgtggt gcggcgccac gaccacccgc ttcgcgccac gccgtcgcca
     3481 ccgcgttggg cacttggaat ggcgggtgcg gccagcccag tttcttgcgg gcgccagcga
     3541 cctcgtcctc gccgagcgcc gcaccatgag tcgcggccgt gccggccttg gtcggtgcgc
     3601 cgtagcctat ggtagtgcgg caggcgatca gtgacggccg gtcggtcgca atggctgctt
     3661 cgatggcggt ggcaacggcg tcagcattgt ggccgtcgac ggcgaaaacg tcccagccgt
     3721 aggcggtgaa acgggtcagc tggtcgtcac tcacgctgag cgccgtcgca ccgtcgatgg
     3781 aaatatggtt gtcgtcgaac aggacgatca gcttggcgag accaagatgg cccgcgagcg
     3841 aggacgcctc gtgactcacc ccctccatca aatcgccgtc gccggcgatc acccaggtgc
     3901 ggtgattgac gatgtcgtcg ccgaagcgcg ccgcaatgat gagttcagca agcgccatgc
     3961 cgacgtcgtt ggcgatacct tggccgagtg gccca
//
LOCUS       DTVW01000941            1170 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2164862, whole
            genome shotgun sequence.
ACCESSION   DTVW01000941 DTVW01000000
VERSION     DTVW01000941.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1170)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1170)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1170
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2164862"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1141
                     /locus_tag="EYO87_12245"
     CDS             <1..1141
                     /locus_tag="EYO87_12245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011569007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="alpha-galactosidase"
                     /protein_id="HIC66740.1"
                     /translation="IASRAAALGAERFVLDDGWFGRRDDDTTSLGDWQVDPRKYPDGL
                     GPLIAHVRGLGMDFGLWFEPEMANRDSELARAHPDWILGAGDQIEGRGQCVLDLSRPV
                     VRDHLFAAVDAVLSAHAIGYVKWDHNRVLPHPDAAQARGLYDVLDRLRAAHPGVEFES
                     CASGGGRIDFGILERAARVWLSDSNDALERLRIQHDAALFLPACVTGSHVGPRICHTS
                     GREIDIHTRAWTAAQRHMGFEMDPRELTDDEARVLRDVTAWWKAGRDWRMEADILRLD
                     SADPAVLAEMQLARDGRRFVAFAAQMASSAPILPRPLRLAGLQPDARYRLRLLDTGQG
                     TRLSRGLPALKAGPVTASGQALMRRGVTLPWTFPQRIRVIEGERA"
BASE COUNT          171 a          399 c          421 g          179 t
ORIGIN      
        1 catcgccagc cgcgccgccg cgcttggcgc ggaacgattc gtgctggatg acggctggtt
       61 cggccggcgc gacgacgaca cgaccagcct cggagactgg caggtcgatc cgcgcaagta
      121 tcccgacggg ctgggtccgc tgatcgcgca tgtgcgcggg ctgggcatgg atttcggcct
      181 ctggttcgaa cccgagatgg ccaaccgcga cagcgaactg gcgcgcgccc atcccgactg
      241 gatcctcggg gccggggatc agatcgaggg ccgcggccaa tgcgtgctgg acctgtcgcg
      301 gcccgtggtc cgcgaccatc ttttcgcagc cgtcgacgcc gttctttcgg ctcacgcgat
      361 cggctatgtg aaatgggatc ataaccgggt gctgccgcat ccggacgcgg cgcaggcgcg
      421 cggactttat gacgtgctgg accggctgcg tgcggcccat ccgggcgtcg aattcgaaag
      481 ctgcgcctcg ggcggggggc ggatcgattt cggcattctc gaacgcgccg cacgggtctg
      541 gctgtcggac agcaatgacg cgctggaacg gctgcgcatc cagcacgacg cagcgctgtt
      601 cctgcccgcc tgcgtcaccg gcagccatgt cggcccccgc atctgccaca cgtcggggcg
      661 cgagatcgac atccacaccc gcgcctggac cgcggcccag cggcacatgg gattcgagat
      721 ggacccgcgc gaactgaccg atgacgaggc gcgggtgctg cgcgacgtga ccgcgtggtg
      781 gaaggcgggt cgcgactggc ggatggaggc cgatatcctg cggctggaca gcgccgatcc
      841 ggccgttctg gccgaaatgc aactggcccg cgacggccgc cgcttcgtgg ccttcgccgc
      901 gcagatggcc agttcggcgc cgatcctgcc ccggccgctg cggctggccg ggctgcagcc
      961 ggatgcccgc tatcggctgc gcttgcttga taccgggcag ggcacgcggc tttcgcgcgg
     1021 gctgccggcg ctgaaggccg ggccggtcac ggccagcggt caggcgctga tgcggcgcgg
     1081 cgtcaccctg ccatggacct ttccacagcg gatccgggtg atcgaaggag aaagggcatg
     1141 agccacgcca accccgactg gatcgccgcc
//
LOCUS       DTVW01000942            3371 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2165366, whole
            genome shotgun sequence.
ACCESSION   DTVW01000942 DTVW01000000
VERSION     DTVW01000942.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3371)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3371)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3371
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2165366"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..495
                     /locus_tag="EYO87_12250"
     CDS             <1..495
                     /locus_tag="EYO87_12250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007813626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HIC66741.1"
                     /translation="PGVLEEMLRQNMIAGLRLSQMVAKRMIKQAEDQRDLAQAGAIVN
                     ISTLAACRPVPSMLGYSIACAAQEQSTRGLALALAPYRIRVNGVSFSSIMSHELKCAL
                     RDDMDLRAQIISGTPLGRIGGADEVAETVQYLVSEGARFVTGQIVTVDGGRSLADPVT
                     AQVL"
     gene            complement(498..911)
                     /locus_tag="EYO87_12255"
     CDS             complement(498..911)
                     /locus_tag="EYO87_12255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010397369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66742.1"
                     /translation="MRRNTAFALSVPLLLAACATPLQQCIGRNTDEYRTVSRLLAVVE
                     GNLARGYAWEEREVVRDRLTQCRDLYRDKEGNVQVSYRPCWQDYVDTQRYRVPIDPAA
                     ETRKRDNLAARKTALATQAAAAVRACKAAYPEKQG"
     gene            976..1842
                     /gene="hemF"
                     /locus_tag="EYO87_12260"
     CDS             976..1842
                     /gene="hemF"
                     /locus_tag="EYO87_12260"
                     /EC_number="1.3.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_353759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-dependent coproporphyrinogen oxidase"
                     /protein_id="HIC66743.1"
                     /translation="MESVMDDQRRQAAGWFRELRDRITTAFESLEDRGPGDGPEGRFV
                     VTPTQRGEDGGGGLMSVMRGGRVFEKVGVNWSEVHGTLAPAAQAAMAARGVPGMDRDP
                     RFWASGISLVAHMQNPHAPAVHMNTRMFWTPGAWWFGGGSDLNPCIEYPHDTAHFHAT
                     LRAACAPHGADYYDRFKAWADEYFFIPHRGRARGVGGIFYDDLCTGDWQADFAFTRDV
                     GAAFLPAFLPLAEARMAQGWDDADREAQLIHRGLYAEYNLVYDRGTKFGLETGHNADA
                     VLMSLPPLAKWV"
     gene            complement(1960..2838)
                     /locus_tag="EYO87_12265"
     CDS             complement(1960..2838)
                     /locus_tag="EYO87_12265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010396288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HIC66744.1"
                     /translation="MIWVAATLIAAVAQTGRNAAQAGLTARVGTTGATAVRFVFGLPF
                     AAVMLLALWPFMELPIIGPGTLAFAGLGAAAQIAATAFMLLTMRGQSFGVATALMKTE
                     PVTLALIGALVLAEPLGPARMGAIGVATLGVVLASGASWSQAGLRPILNGIAAGALFG
                     ISAIGFRGALLALPEGGYFARALTVLVLTLAMQSVAMLAWLSAFDRAALRGITVEWRV
                     SLAAGALGAMASLFWFVGFALTPAANVRTLALVEVVFAQIVSGRLFREATQRLQLAGM
                     ALIVIGVGWLLAVAIG"
     gene            complement(2835..>3371)
                     /locus_tag="EYO87_12270"
     CDS             complement(2835..>3371)
                     /locus_tag="EYO87_12270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008331132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen decarboxylase"
                     /protein_id="HIC66745.1"
                     /translation="DFKAADRAAFSALIDRITEATILYLSAQIEAGAEAVKLFDSWAG
                     SLAGPDFDDFAIAPARRIIAALKQRHPGIPVIAFPRGAAQRYVGFARATGADCVALDT
                     SVSPEWAVRNVQIDGCVQGNLDPRHMVTGGRDLIAEAQRITRAFRGGPHVFNLGHGIT
                     PEADPDNVAAMIEAVRSA"
BASE COUNT          574 a         1138 c         1137 g          522 t
ORIGIN      
        1 ccgggcgtgc tcgaggaaat gctgcgtcag aacatgatcg cgggcctgcg gctgtcgcag
       61 atggttgcca agcggatgat caagcaggcc gaggaccagc gcgatctggc gcaggcgggc
      121 gccatcgtga acatctcgac gctggcggcc tgccggccgg tgccgtcgat gctgggctat
      181 tccatcgcct gcgcggccca ggaacaatcg acgcgcgggc tggcgctggc gctggcgccc
      241 tatcggatca gggtgaacgg cgtgtccttc agcagcatca tgtcgcacga actgaaatgc
      301 gccttgcgcg atgacatgga tctgcgcgcc cagatcattt cgggcacgcc tctgggccgg
      361 atcggcggcg ccgacgaagt ggccgagacg gtgcaatatc ttgtcagcga gggcgcgcgc
      421 ttcgtgaccg gccagatcgt gaccgtggat ggcggccgca gccttgccga tccggtcacg
      481 gcgcaggttc tgtaatctca gccctgcttt tcgggatagg cggccttgca ggcccgaacc
      541 gcggccgccg cctgggtggc cagcgccgtc ttgcgcgccg ccaggttgtc gcgcttgcgg
      601 gtttcggccg ccgggtcgat gggcacgcgg taacgctggg tatcgacgta gtcctgccag
      661 cagggacgat agctgacctg aacgttcccc tccttgtcgc gatacagatc gcggcactgg
      721 gtcaggcggt cgcgcaccac ctcgcgctct tcccaggcat agccacgcgc cagattgccc
      781 tcgaccacgg ccagcaggcg gctgaccgtg cgatattcat cggtgttgcg gccgatgcac
      841 tgctgtagcg gggtcgcgca ggccgccagc agcagcggaa cggaaagggc gaaggcggtg
      901 ttgcggcgca tgatcggtct ctttacatcg gcgaggcgat gctagccggg cgttcggtcg
      961 cttggcaaat caagaatgga gagcgtcatg gacgaccaac gccgccaggc tgccggctgg
     1021 ttcagggaat tgcgcgacag gatcacgacc gccttcgaat cgctggagga tcgcggcccc
     1081 ggcgacggac ccgagggacg attcgtcgtc actcccacgc aacgcggcga ggatggcggc
     1141 ggcgggctga tgtcggtcat gcgcggtggc cgggtcttcg agaaggtcgg cgtgaactgg
     1201 tccgaggttc atggcacgct ggccccggcg gcccaggcgg ccatggctgc acgcggtgtg
     1261 cccggcatgg accgcgaccc gcggttctgg gcctcgggga tcagccttgt cgcgcatatg
     1321 cagaaccctc atgcgccggc ggtccatatg aacacgcgca tgttctggac gcccggcgcc
     1381 tggtggttcg gcggcggatc ggatctgaac ccctgcatcg aatatcccca tgatactgcg
     1441 catttccatg ccaccctgcg tgcggcctgc gcgccgcacg gggccgatta ttacgaccgc
     1501 ttcaaggcct gggcggacga atatttcttc atcccccatc gcggccgcgc gcgcggggtc
     1561 ggcggcatct tctacgacga tctgtgcact ggcgactggc aggccgattt cgcctttacc
     1621 cgcgatgttg gcgcggcttt cctgcccgcc ttcctgccgc tggccgaggc acgcatggcg
     1681 cagggctggg acgacgccga ccgcgaggcg cagctgatac atcgcggcct ctatgccgaa
     1741 tacaatctgg tctatgatcg cggcacgaag ttcgggctgg agaccggcca taatgccgat
     1801 gccgtgctga tgagcctgcc gccgctggcg aaatgggtct gaggatcgcg tgatccttgc
     1861 cgatccgccc atccggcgac agcagcggga agggatggtt gcggcagggg gaccggggga
     1921 tgcaaaaccc ccggccgtcg cgggacgcga aagacgccct cagccgatgg ccaccgccag
     1981 cagccagccg accccgatca cgatcagcgc cattccggcc agttgcagcc gttgcgtggc
     2041 ctcgcggaac agccggcccg aaacgatctg cgcgaacacc acctcgacca gtgccagggt
     2101 gcggacattg gcggcggggg tcagtgcgaa acccacgaac cagaacagcg acgccattgc
     2161 gccaagcgcg ccggccgcca gtgacacccg ccattcgacg gtgatgccgc gcagcgccgc
     2221 gcgatcgaag gccgacaacc acgccagcat cgccaccgat tgcatggcca gcgtcaggac
     2281 cagcaccgtc agcgcccggg caaaatagcc gccctcgggc agcgcaagca aggcgccgcg
     2341 aaacccgatg gccgagatcc cgaacaatgc ccccgcagca atgccgttca ggatcggccg
     2401 caggcccgct tgcgaccagc tggccccgga tgccagcacg acgcccaggg tcgccacccc
     2461 gatcgcgccc atccgtgccg gtcccagcgg ctcggccaga accagagcgc cgatcagtgc
     2521 cagcgtcacc ggttcggtct tcatcagcgc ggtggcgacg ccaaagctct ggccgcgcat
     2581 ggtcagcagc atgaaggccg tcgcagcaat ctgcgccgcg gcaccaagtc cggcaaaggc
     2641 cagcgtgccg gggccgatga tcggcaattc catgaacggc cacagcgcca gcagcatcac
     2701 cgccgcgaag ggcaggccaa aaacgaaacg cactgccgtc gcgccggtcg ttccgacgcg
     2761 ggcggtcagt ccggcctgcg ccgcattccg tccggtttgc gcgaccgcgg cgatcaacgt
     2821 ggccgcgacc cagatcatgc gcttcggacc gcctcgatca tggccgcgac gttgtccggg
     2881 tcggcctcgg gcgtgatccc atgacccaga ttgaagacat gcgggccgcc ccgaaaggcg
     2941 cgggtgatcc gttgcgcctc ggcgatcaga tccctgccgc ccgtgaccat gtgtcgcggg
     3001 tccagattgc cctggacaca gccgtcgatc tgtacgttcc ggaccgccca ttccggactg
     3061 accgaagtgt ccagcgcgac gcaatcagcg cccgtggcac gggcaaagcc gacatagcgt
     3121 tgtgccgccc cgcgcggaaa ggcgatgacc gggatgccgg ggtggcgctg tttcagcgcg
     3181 gcaatgatgc gacgggcggg ggcgatcgcg aaatcgtcga aatcggggcc tgccaggctg
     3241 cctgcccagc tgtcgaacag cttgaccgcc tcggcgcccg cttcgatctg cgccgacaga
     3301 tacaggatcg tcgcctcggt gatccggtcg atcagcgccg aaaatgccgc acggtccgcc
     3361 gccttgaaat c
//
LOCUS       DTVW01000943            1457 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2167622, whole
            genome shotgun sequence.
ACCESSION   DTVW01000943 DTVW01000000
VERSION     DTVW01000943.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1457)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1457)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1457
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2167622"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..437)
                     /locus_tag="EYO87_12275"
     CDS             complement(<1..437)
                     /locus_tag="EYO87_12275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008334897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HIC66746.1"
                     /translation="MPVTLNTSDDDFDARFAAMLSAKREDSGDVNAVVAGIIADVRAR
                     GDAVLCELTARFDRLELTPDRIRFAPDEIEAEVAKVGPRDRAALILAAERIRAYHARQ
                     MPEGASWTDPEGATLGWRWTPVSAAGLYVPGGQAAYPSSVLMNA"
     gene            complement(552..1028)
                     /locus_tag="EYO87_12280"
     CDS             complement(552..1028)
                     /locus_tag="EYO87_12280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013068269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2948 family protein"
                     /protein_id="HIC66747.1"
                     /translation="MAQDARFADGDPRPLALRAEDEADLKILSALVQDAILPASEIIH
                     DPRARRLALLVNRFRWEDADKARAEGRDFERVQALLTIGDVISLESDGITRDADTVLE
                     LLTIGWQAGVDGCGRLLLEFSGDGTLAAEVECINLDLRDVTRPYRAVSGKAPSHPD"
     gene            complement(1032..>1457)
                     /locus_tag="EYO87_12285"
     CDS             complement(1032..>1457)
                     /locus_tag="EYO87_12285"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007792602.1"
                     /note="adds enolpyruvyl to UDP-N-acetylglucosamine as a
                     component of cell wall formation; gram-positive bacteria
                     have 2 copies of MurA which are active; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HIC66748.1"
                     /translation="GLKVARRNGRVRAVDVTTAPFPGFPTDLQAQFMALMCLADGRSV
                     LEETIFENRFMHAPELTRMGARIDVHGGHATVTGVEALRGAPVMATDLRASVSLILAG
                     MAAEGQTILRRVYHLDRGYEHVVRKLRGVGAHIERVKEE"
BASE COUNT          248 a          540 c          442 g          227 t
ORIGIN      
        1 gcgttcatca ggaccgagga cggataggcc gcctgcccgc ccggcacata aagccccgcc
       61 gccgacaccg gcgtccagcg ccagcccagg gtcgcgcctt cgggatcggt ccagcttgca
      121 ccctcgggca tctgccttgc gtgataggcg cggatccgct cggccgccag gatcagggcg
      181 gcccgatccc ggggaccgac cttggccact tcggcctcga tctcgtcggg cgcgaaccgt
      241 atcctgtcgg gggtcagttc cagccggtcg aaccgcgccg tcaattcgca caggaccgca
      301 tcaccgcgcg cgcggacatc ggcgatgatg cccgccacga ccgcgttaac atcgcctgaa
      361 tcctcgcgct tggccgacag catcgcggcg aagcgggcgt caaaatcgtc atcggatgtg
      421 ttcagcgtga ccggcatcgt cttcccctgc aatcgcgcct tgttagcgag aagccggggt
      481 tgcctcaagc cgcggccggc gccgatccct gataccggcg cgaaagcggc gccccggcgc
      541 cgtcatgcgc ctcaatccgg atgcgagggc gccttgccgg acacggcccg atagggtcgg
      601 gtcacgtcgc gcagatccag attgatgcat tccacctcgg cggccagcgt gccatcgccc
      661 gaaaattcca gcagcagccg cccgcagccg tccaccccgg cctgccagcc gatcgtcagc
      721 aattccagaa ccgtgtcggc gtcacgggtg atcccgtcgc tttccagcga gatcacgtca
      781 ccgatggtca gcagggcctg cacccgttcg aaatcgcgtc cctcggcgcg ggccttgtcc
      841 gcatcctccc atcggaagcg gttcaccagc agcgccagac gccgcgccct ggggtcatgg
      901 atgatctcgg acgcgggcag gatcgcatcc tgcaccagcg ccgacaggat cttcagatcg
      961 gcctcgtcct cggcccgcag ggccagcggt cggggatctc cgtcagcgaa acgcgcatcc
     1021 tgggccatgt cctattcctc cttcaccctc tcgatatgcg caccgacgcc gcgcagcttg
     1081 cgcaccacat gttcatagcc gcgatccaga tgatagaccc gacgcagaat ggtctgcccc
     1141 tcggccgcca ttccagccag gatcaggctg acagaggcgc gcagatcggt cgccatgacc
     1201 ggcgcgccgc gcagcgcctc gaccccggtg acggtggcat gaccgccatg cacgtcgatc
     1261 cgcgcaccca tccgggtcag ttccggcgcg tgcatgaaac ggttctcgaa aatcgtctct
     1321 tccagcacgc tgcgaccgtc ggccagacac atcagcgcca tgaactgggc ctgaagatcg
     1381 gtcggaaagc ccggaaacgg cgccgtggtc acatcgacgg cccgaacccg gccattgcgc
     1441 cgcgcgacct tcagccc
//
LOCUS       DTVW01000944            1345 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2167966, whole
            genome shotgun sequence.
ACCESSION   DTVW01000944 DTVW01000000
VERSION     DTVW01000944.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1345)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1345)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1345
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2167966"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..896
                     /locus_tag="EYO87_12290"
     CDS             <1..896
                     /locus_tag="EYO87_12290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010395628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HIC66749.1"
                     /translation="ILLLPTAPVAARPAVDAVHGRPPARQSDEIRCTDDGRDCVRRSR
                     YVADVCKLVERNAAQRGLDPNFLARLLWKESRFEPGAISPVGAMGIAQFMPETARLYD
                     LDDPFNPAQAIFKAAWYLRYLTDMTGNIGLAAIAYNGGEARAARFIASETVLPYETQD
                     YVEAITGFNAWRWRDNPPETADLKLALDPDRPFRPACESLAGNRGLREFVVEPRVFPW
                     GVIVASHRSRAVAQGQVARLNRTLRPLLDGRRVDYVRKRLSGIAQPVYTAQIGYESRG
                     EAYAFCIRLKRLGGNCIVLKN"
     gene            complement(912..>1345)
                     /locus_tag="EYO87_12295"
     CDS             complement(912..>1345)
                     /locus_tag="EYO87_12295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HIC66750.1"
                     /translation="QSGAAPGLALLQTHQPGHAVIRAILSGHDEAFWDAEAAGRQAAG
                     MPPFGRLAGVILSHPDLGVVSDFARHLAAHAGPLDHAGAELWGPAPAPIARIRGRHRM
                     RMLIHAPRQAPLQAAIADWLAPHKLPTNLRLAVDIDPQTFL"
BASE COUNT          215 a          450 c          479 g          201 t
ORIGIN      
        1 cgatcctgct tcttccaacc gccccggtcg ccgcccggcc cgccgtcgat gccgtccacg
       61 gccgcccccc ggcccggcaa agcgacgaga tccgctgcac cgatgacggc cgcgattgcg
      121 tgcggcggtc ccgctatgtg gcggatgtct gcaagctggt ggaacgcaat gccgcgcagc
      181 gcgggctgga tccgaatttc ctggcccgcc tgttgtggaa ggaaagccgg ttcgagccgg
      241 gcgcgatcag tccggtcggc gcgatgggga tcgcgcaatt catgcctgaa accgcccggc
      301 tttacgatct ggacgatccg ttcaacccgg cccaggcgat cttcaaggcg gcgtggtatc
      361 ttcgctatct tacggacatg acgggcaata tcgggctggc cgcgattgcc tataacggcg
      421 gcgaggcacg ggcggcgcgg ttcattgcca gcgaaaccgt gctgccctac gagacgcagg
      481 actatgtcga ggcgatcacc ggattcaacg catggcgctg gcgcgacaat ccgcccgaga
      541 cggcggacct gaagctggct ctggatcccg accggccgtt ccggccggcc tgcgaatcgc
      601 tggccggcaa tcgcggcctg cgcgaattcg tcgtcgagcc gcgcgtcttt ccctggggcg
      661 tgatcgtcgc cagccatcgc agccgcgcgg tcgcgcaggg acaggtggcg cggctgaacc
      721 ggacgctgcg cccgcttctg gatggcaggc gcgtggacta tgtcagaaag cgcctgagcg
      781 gaatcgcgca gcccgtctat accgcccaga tcggctatga aagccggggc gaggcctatg
      841 ccttctgcat caggctgaaa cggctgggcg gcaactgcat cgtgctgaag aactgaaccg
      901 cggcgcgcgg cctacagaaa ggtttgcggg tcgatatcca ccgccagccg caggttggtc
      961 ggcagcttgt gcggcgccag ccagtcggcg atggccgctt gcagcggcgc ctgacgcggg
     1021 gcgtggatca gcatccgcat ccggtgacgc ccccggatgc gggcgatggg cgcgggcgcc
     1081 ggaccccaca attcggcgcc ggcgtgatcc agaggtccgg catgggcggc aaggtggcga
     1141 gcgaaatcgc tgaccacgcc aaggtcggga tgcgacagga tcacgcccgc cagccggccg
     1201 aagggcggca tcccggcggc ctggcggccg gcggcctcgg cgtcccagaa agcctcgtca
     1261 tggcccgaca ggatggcgcg gatcaccgcg tggccgggct ggtgggtctg cagcagcgca
     1321 aggcccggcg cggcacccga ctggc
//
LOCUS       DTVW01000945            3552 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_216840, whole
            genome shotgun sequence.
ACCESSION   DTVW01000945 DTVW01000000
VERSION     DTVW01000945.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3552)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3552)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3552
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_216840"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1506
                     /locus_tag="EYO87_12300"
     CDS             <1..1506
                     /locus_tag="EYO87_12300"
                     /inference="COORDINATES: protein motif:HMM:PF00654.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chloride channel protein"
                     /protein_id="HIC66751.1"
                     /translation="LVRRYAPEAKGHGVPEVMDAIYYRNGKIRPQVVVIKSLASALSI
                     GSGASVGREGPIIQIGSGIGSVLGGLARLRSWQVITLVAAGAGAGIAATFNTPLGAVL
                     FAVELMLPEFSARTLIPVVIATGTATYIGRLAFGIAPAFLVAAHERPDLVVPLSVDML
                     PLYVIFGLVTGVAAAGFVRGLYMIEDAFDGWKANAYLKNAAGMLSLGILMYVLLLTTG
                     MYHTAGVGYATIEAILTGQLTAPAFLMLLFVLKFLATSVSLGAGASGGIFSPSLFLGA
                     ALGGAFGGVLDIMFPNLGFHSVTFALIGMACIVGASTGGALTAIVMLFEMTGDYTITV
                     AAIIAVVVALGVRKQLSPDDIYTLKLTRRGHRIPRESRAHMFGIRQIKEIMSPAVGVI
                     EKAELGDRGSVDTLLGSERIYAVVVENRSVVGIVRVHPEDPTRRHGPLIGPVGYAKET
                     SFLQNAMTNMADRDHAALLILPDKTMPRPENVIGVLTRDTIAAAVLRDYRS"
     gene            complement(1535..3403)
                     /gene="cobT"
                     /locus_tag="EYO87_12305"
     CDS             complement(1535..3403)
                     /gene="cobT"
                     /locus_tag="EYO87_12305"
                     /EC_number="6.6.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018000868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobaltochelatase subunit CobT"
                     /protein_id="HIC66752.1"
                     /translation="MKTSDNPADPFKKALTEATRALADEHELNVTFSADPSGVAGDTM
                     RLPQISRRMGRQEVLLARGTADALAMRMRHHDAATHAKFAPAGPMAREIYEAMETARC
                     EALGARDMPGALSNIDARIGAEADKKGYAQIKAPADAPLSVAAGYILRQAATGRALPV
                     GAQHVADLWRPFIEQQAGETLGDLRETLADQAAFARLARRAISDLGYGDQLGEDPDEP
                     EDDAAEEDAEQDEEAGDNQARDQDDSEDGEGSPERSQEQQQDERQAQVSMDDQADDEL
                     TDEAEMPDAEAPPDLPPPVSEASPDYRVFSQNWDEEIRADDLADPAELERLRAYLDKQ
                     LEPLRGAVSRLANKLQRRLQAQQNRSWEFDKEEGVLDAGRLARVVANPTTPLSFKVEK
                     DMEFRDTVVTLLIDNSGSMRGRPISIAAICADVLARTLERCSVKVEILGFTTRAWKGG
                     QAREEWLKQGRPSQPGRLNDLRHIIYKPADAPWRRVRPNLGLMMKEGLLKENIDGEAL
                     EWAHRRLAKRAEARKILMVISDGAPVDDSTLSVNPANYLEKHLRDVIAMVEKKRAVEL
                     LAIGIGHDVTRYYDRAVTITDAEQLAGAITEQLAALFDSDPRKRARVLGMAAMRRA"
BASE COUNT          533 a         1180 c         1155 g          684 t
ORIGIN      
        1 ctggtgcgcc gctacgcgcc cgaggccaag gggcacggcg tgcccgaggt gatggatgcg
       61 atctattacc gcaacggcaa gatccgcccg caggtggtcg tgatcaagtc gctggcctcg
      121 gcgctgtcga tcggatcggg cgcctcggtc gggcgcgaag gtccgatcat ccagatcgga
      181 tcggggatcg gatcggtcct gggcgggctg gcgcgattgc gcagctggca ggtgatcaca
      241 ctggtcgcgg cgggggccgg ggcggggatc gcggcgacct tcaacacgcc gcttggcgcg
      301 gtgctgttcg cggtcgaact gatgctgccg gaattcagcg cacgcaccct gatcccggtc
      361 gtcatcgcca ccggcaccgc aacctatatc ggccgactgg ccttcggcat tgctccggcc
      421 tttcttgtcg ccgcgcatga gaggccggat cttgtcgtgc ccctttcggt cgacatgctg
      481 cctctctacg tgatcttcgg ccttgtcacg ggggtcgccg cggccggttt cgtgcgcggt
      541 ctctacatga tcgaggacgc tttcgacggc tggaaggcca atgcctatct gaaaaacgcc
      601 gccggaatgc tgtcgctggg catcctgatg tatgtgcttt tgctgaccac cggcatgtat
      661 cacacggcgg gcgtcggcta tgccacgatc gaggcgatcc tgaccggtca gttgaccgcg
      721 ccggccttcc tgatgctgct tttcgtgctg aagttccttg ccacctcggt cagccttggc
      781 gccggcgcct cgggcggaat cttctcgccc tcgctgtttc tgggcgcagc acttggcggg
      841 gcgttcggcg gcgtgctgga catcatgttc ccgaatttgg gtttccattc ggtcactttc
      901 gcgctgatcg gcatggcctg catcgtaggc gcctcgaccg gcggggcgct gaccgccatc
      961 gtcatgctgt tcgagatgac cggcgactac accatcacgg tcgcggcgat catcgcggtc
     1021 gtggtcgcgc ttggcgtccg caagcaattg tcgcccgacg acatctacac gctgaaactg
     1081 acgcgccgcg gccatcgcat cccgcgcgaa tcgcgcgccc acatgttcgg catccgtcag
     1141 atcaaggaaa tcatgtcccc tgccgtcggc gtgatcgaga aggccgaact gggcgatcgc
     1201 ggcagcgtgg acacattgct gggatcggaa cggatctatg cggtcgtggt cgagaaccgc
     1261 agcgtcgtcg gcatcgtccg cgtccatccc gaagatccga ccaggcgaca cggccccctg
     1321 atcggtccgg tgggctatgc caaggaaacc agttttctcc agaacgcgat gacgaacatg
     1381 gccgaccgcg atcacgcggc gcttctgatt ctgcccgaca agaccatgcc acggccggaa
     1441 aacgtgatcg gcgtgctgac ccgcgacacc atcgcggcgg cggttctgcg cgattatcgc
     1501 agctgagacg gaatcggccg gcggatcccg cgcctcaggc gcggcgcatt gccgccatgc
     1561 ccagaacgcg cgcgcgcttg cgcgggtcgc tgtcgaacag cgcagccagt tgttccgtga
     1621 tcgcaccggc cagctgttcg gcatccgtga tggtgacagc ccggtcgtaa tagcgggtca
     1681 catcgtgacc gatgccgatg gccagcaatt cgacggcgcg tttcttctcg accatggcga
     1741 tcacgtcgcg caggtgcttt tccagataat tggccggatt gaccgacagg gtcgaatcat
     1801 cgaccggcgc gccgtccgag atgaccatca ggatcttgcg cgcttcggcc cgctttgcca
     1861 gccgccgatg cgcccattcc agcgcctcgc cgtcgatgtt ttccttcagc agcccttcct
     1921 tcatcatcag gcccagattc ggcctgacac gccgccaggg cgcatccgcg ggcttgtaga
     1981 tgatgtggcg cagatcgttc aggcggcccg gctgggacgg acgaccctgt ttcaaccatt
     2041 cctcgcgggc ctgccccccc ttccacgcgc gggtggtaaa gcccaggatc tcgaccttga
     2101 cgctgcaccg ttccagcgtc cgggccagca cgtcggcgca gatcgccgcg atcgagatgg
     2161 gtcggccgcg catggagccg gaattgtcga tcagcagcgt caccacggta tcgcggaact
     2221 ccatgtcctt ttcgaccttg aagctcagcg gcgtggtcgg gttggccaca acgcgggcca
     2281 ggcggccggc atccagaacg ccttcctcct tgtcgaattc ccagctgcgg ttctgctgcg
     2341 cctgaaggcg gcgttgcagt ttgttggcca gccggctgac cgcaccgcgc agcggttcaa
     2401 gctgcttgtc cagataggcg cgcagacgct ccagttcggc cgggtcggcc agatcgtcgg
     2461 cgcggatttc ctcgtcccag ttctgcgaga acacacggta atcggggctg gcctcgctga
     2521 ccggcggcgg aaggtcgggc ggcgcttccg catccggcat ctcggcctcg tcggtcaact
     2581 cgtcatcggc ctgatcgtcc atgctgacct gggcctgacg ttcgtcctgc tgctgttcct
     2641 gactgcgctc gggcgagcct tcgccatcct cgctgtcatc ctggtcgcgc gcctggttgt
     2701 cgccggcctc ctcgtcctgt tcggcgtctt cctcggcggc atcatcctcg ggttcgtcgg
     2761 gatcctcgcc cagttgatca ccataaccca gatcgctgat ggcgcgccgc gcaagtcgcg
     2821 cgaaggccgc ctgatcggcc agggtttcac gaagatcgcc cagcgtttcg cccgcctgct
     2881 gttcgatgaa gggccgccac agatcggcga catgctgcgc acccacgggc agggcccggc
     2941 cggtcgcggc ctgccgaagg atatagcccg cggccaccga cagtggcgca tcggccggag
     3001 ccttgatctg ggcataaccc ttcttgtcgg cctcggcgcc gatcctggca tcgatgttgg
     3061 acagggcgcc gggcatgtcg cgcgcgccca gagcctcgca gcgggcggtt tccatggctt
     3121 cgtaaatctc gcgcgccatc ggacctgctg gcgcgaattt cgcatgggtc gccgcgtcgt
     3181 gatggcgcat ccgcatcgca agggcatcgg cggttccgcg cgccagcagc acctcttgcc
     3241 gacccatgcg acggctgatc tgcggcaggc gcatcgtgtc gccggcgaca ccggacggat
     3301 cggcgctgaa ggtcacgttc aactcatgct cgtcggcaag cgcgcgcgtg gcctcggtca
     3361 gggccttctt gaagggatcg gcgggattgt cggatgtctt catgtcatcc atagagcacc
     3421 gcccgaggcg cggggcaagg ggcagacgcg gcgccaggag gctgtgcagg gccgcaccgc
     3481 cgctgtgcgc ggatgcgcaa aagcccttgc aaccggtcag gtcgcgatcg cgttggtggg
     3541 gatattgccc aa
//
LOCUS       DTVW01000946            2909 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2168553, whole
            genome shotgun sequence.
ACCESSION   DTVW01000946 DTVW01000000
VERSION     DTVW01000946.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2909)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2909)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2909
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2168553"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            141..782
                     /locus_tag="EYO87_12310"
     CDS             141..782
                     /locus_tag="EYO87_12310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018458682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp/Glu racemase"
                     /protein_id="HIC66753.1"
                     /translation="MTGPIVVINPNSNQAVTDGLAEALAPFAAGIRIDCVTLTEGPFG
                     IESQRDVDQVALPLAALIEARADAAAFVIACYSDPGIDLCRETARVPVFGIQESGVLT
                     ALARGDRVGVFAIAEASIRRHRRYLRRMGVEHRLAGERALNMSVDESARGEGTLARLT
                     EVGHELIADGADVLLLGCAGMARHRRPLQAALGRPVIDPTQAAVAMAIGAVLA"
     gene            1039..2067
                     /locus_tag="EYO87_12315"
     CDS             1039..2067
                     /locus_tag="EYO87_12315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008562551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HIC66754.1"
                     /translation="MIKSDSSLEALQDAKRLVRDYYAELDRAEADGIGDAMARFCAPD
                     LAWRGFHPFNEQTGPRAVADRFWRPLRRSLRHMQRRLDLFFAGHNEIDGFQSVWVSSM
                     GHLMGLFDRAWLGIAPTRQIAMLRYAAFHKVERNRIAETAMFFDIPHFMVQAGLRPFP
                     PQTATHLVQPGPRTHDGLMFDKQDPDEGERTLAAIDFMVGDVATWKDQRQIPLVDELR
                     RSWNEDMVWWGPEGIGATYTIERYAEQHSGPFRAAFRDRKFNGHLCRMAEGRFGGFFG
                     WPNLTLTPTGGFMGMPGSDRPGDMRVIDMYRREGDKLAENWVFIDLLHFWNQQGLDVL
                     GRMQALSR"
     gene            2182..>2909
                     /locus_tag="EYO87_12320"
     CDS             2182..>2909
                     /locus_tag="EYO87_12320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014875630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HIC66755.1"
                     /translation="MAEIQLRNISKRWGSFVGVDNFDLTIADREFLVLLGPSGCGKTT
                     TMRMIAGLEDASEGDIVIDGRRVNDLDPKDRDVAMVFQSYGLYPHINVYENIRFPLKV
                     RKVDPATHDERVMRAARMVELEDFLHRKPAELSGGQRQRVALARAIVREPNVFLMDEP
                     LSNLDAKLRVSTRAQIKNLSHELKVTTVYVTHDQIEAMTLADRVVVMKKGVVQQVGTP
                     TEIYDRPTNTFVAGFIGSPAMNLM"
BASE COUNT          529 a          870 c          977 g          533 t
ORIGIN      
        1 gtgatcgagg acggcaagct ggtggccgag ccgggaagag gccggttcgt tgcccgcgcg
       61 cggcccgact ttaccggtta tccgggcacg gccacgccag agctggatcc ggcgtggaac
      121 ttcggggcgg agatcgcgcc atgacgggac cgatcgtcgt catcaacccg aactcgaacc
      181 aggcggtgac ggacggtctg gccgaggcat tggcgccctt cgcggccggg atccggatcg
      241 attgcgtgac cctgaccgaa ggcccgttcg gcattgaaag ccagcgtgac gtcgatcagg
      301 tggccctgcc gctggccgct ttgatcgagg cccgcgccga cgccgcggcc ttcgtcatcg
      361 cctgctattc cgatccgggc atcgacctgt gccgcgagac ggccagggtg cccgtcttcg
      421 ggatccagga atccggtgtg ctgaccgcgc tggcgcgcgg cgaccgcgtg ggtgtcttcg
      481 ccattgccga agcgtcgatc cgtcgccatc ggcgctacct gcgccggatg ggcgtggagc
      541 accgtcttgc cggtgaacgc gcgttgaaca tgagcgtgga tgaaagcgcg cgtggcgagg
      601 ggacgctggc gcggctgaca gaggtcggtc acgagctgat cgccgatggc gcggatgtcc
      661 tgctgctcgg ctgcgccggg atggcccgtc atcgacgccc cttgcaggcc gcccttggcc
      721 gccccgtgat cgatccgaca caggccgccg ttgccatggc catcggggcg gtgctggcct
      781 gacatcttcg cggcccgccg caggacgatc ctgtctggcc cggatgggat gtcttcgcaa
      841 ggcgcaaggc cacccgtgag gtcggcgaga tgcgtcgccg gggttcccgg accccgatcg
      901 gatcgaaaat gcgccagcga gggcgctgcc tttcatgaaa acctgaaacg ccctgatcgc
      961 tgccggaaaa attccgtggc gggcgggact gtgaaatcgt attcatccgg gatcaaatct
     1021 ggtgtgggag tgaagcacat gatcaagtcg gattcttcgt tggaagccct gcaagacgcc
     1081 aagcggctgg ttcgggatta ttatgccgaa ctcgacagag cagaggccga cgggatcggc
     1141 gatgcgatgg ccaggttctg cgcgcccgac cttgcatggc gtggatttca tccgttcaac
     1201 gaacagactg gaccccgtgc cgtggccgac aggttctgga ggccgctcag gcgaagtctg
     1261 cgccatatgc agcgacggct tgacctgttc ttcgcgggcc ataacgagat cgacggcttt
     1321 caatccgtct gggtgtcctc gatgggacat ctgatgggat tgttcgaccg tgcatggctg
     1381 ggaatcgcgc ccacgcgcca gatcgcgatg ctgcgctatg ccgcgttcca taaagtcgaa
     1441 aggaaccgga tcgcggaaac cgcgatgttc ttcgacatcc cgcatttcat ggttcaggcc
     1501 gggcttcgcc cctttccgcc acagacggca acgcatcttg tccagcccgg tccgcggacc
     1561 catgacgggc tgatgtttga caagcaggac ccggacgagg gcgagcggac gctggccgcc
     1621 atcgatttca tggtcggcga tgtcgcgacc tggaaggatc agcgtcagat tccgctggtg
     1681 gacgaattgc gccggtcctg gaacgaggac atggtctggt gggggcccga ggggatcggc
     1741 gcgacctaca ccatcgaacg ttatgccgaa cagcatagcg gaccgtttcg cgccgccttc
     1801 cgcgaccgga agttcaacgg ccatctgtgc cggatggcgg aaggcaggtt cggcggcttc
     1861 tttggctggc cgaacctgac cctgaccccg accggcggtt tcatggggat gccgggcagc
     1921 gacaggccgg gcgacatgcg cgtcatcgac atgtatcggc gcgaaggaga caagttggcg
     1981 gagaactggg tcttcatcga cctgctgcat ttctggaacc agcaggggct ggatgttctg
     2041 ggccggatgc aggcactgtc gcgatgacgg agggcggaaa agggtgcgtg gatttttttg
     2101 ttgataagaa tctcggaatg cggcagaagt gagtgaatac gaattcaatc agccttcggc
     2161 gcagcgacgg gacaccccct catggcggaa atccagctac ggaatatctc gaagcggtgg
     2221 ggcagcttcg tcggtgtcga caatttcgac ctgacgattg ccgaccgcga attcctcgtt
     2281 cttctggggc cgtccggttg tggaaagacg acaacgatgc ggatgatcgc ggggctcgag
     2341 gatgccagcg aaggcgatat cgtgatcgat ggccgccggg tcaacgatct ggaccccaag
     2401 gaccgcgacg tggcgatggt gttccagtcc tacggacttt atccgcatat caacgtctat
     2461 gaaaacatcc gctttccgct gaaggtccgc aaggtcgatc cggccacgca tgacgaacgg
     2521 gtcatgcgcg ccgcccgcat ggtcgagctg gaggatttcc tgcatcgcaa gccggccgaa
     2581 ttgtccggtg gccagcgtca gcgcgtcgcg ctggcccgcg ccatcgtgcg cgaaccgaac
     2641 gtgttcctga tggacgagcc gctgtcgaac ctggacgcca agctgcgtgt ctcgacccgc
     2701 gcgcagatca agaacctcag ccacgaactg aaggttacca cggtctatgt gacccatgac
     2761 cagatcgagg ccatgacgct ggccgaccgc gtggtggtga tgaagaaggg tgtcgtccag
     2821 caggtcggga cgccgaccga aatctacgat cgcccgacca ataccttcgt ggcgggcttc
     2881 atcggctcgc ccgcgatgaa cctgatgca
//
LOCUS       DTVW01000947            1120 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2170573, whole
            genome shotgun sequence.
ACCESSION   DTVW01000947 DTVW01000000
VERSION     DTVW01000947.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1120)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1120)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1120
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2170573"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..597
                     /locus_tag="EYO87_12325"
     CDS             <1..597
                     /locus_tag="EYO87_12325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011457217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIC66756.1"
                     /translation="EPLANLDYKLREELRVEIPRIFEESGAIFVYATTEPEEALLLGG
                     NTATLWEGRITQFGPTPQVYRQPADAVTARVFSDPPMNFKPVSVRGGVAGIHDATWQV
                     DLPDGDYLAGFRPSHLSLHERPGAMPLSTVLETTEITGAQTFLHLRHGPDRWVGLVNG
                     VHKRDHGQALTVWLDPAHVYLFNTDGGLARGAAYAAAA"
     gene            621..>1120
                     /locus_tag="EYO87_12330"
     CDS             621..>1120
                     /locus_tag="EYO87_12330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009504838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIC66757.1"
                     /translation="MTEITLENLAHSYLPDPSGDADWALKPMNLTWRDGGAYALLGSS
                     GCGKSTLLNIISGLLVPSQGRVLFGETDVTGLPTLDRNIAQVFQFPVVYDTMSVRQNL
                     AFPLKNRGLAEDVIKSRVAEVAEMIGMTDVLDRRARGLTADAKQKISLGRGMVRQDVN
                     AILFDEP"
BASE COUNT          194 a          371 c          369 g          186 t
ORIGIN      
        1 gagccgctgg ccaatctgga ctacaagctg cgcgaggaat tgcgcgtcga gatcccccgc
       61 atcttcgagg aatccggcgc catcttcgtc tatgccacga ccgaacccga ggaagccctg
      121 ctgctgggcg gcaataccgc gacattatgg gaaggccgga tcacgcaatt cggccccacg
      181 ccacaggtct atcgccagcc cgccgacgct gtgaccgcaa gggtcttttc ggacccgccg
      241 atgaatttca agcccgtctc ggtccggggc ggggtggccg ggatccacga cgcgacctgg
      301 caggtcgatc tgcccgacgg cgactatctg gcgggattcc gaccgtcgca cctgtcgctg
      361 cacgaacggc ctggcgcgat gccgctgtcc accgtcctgg agacgaccga gatcaccggc
      421 gcgcagacct tcctgcatct gcgccacggg cccgatcgct gggtcgggct ggtcaacggc
      481 gtgcacaagc gcgatcatgg gcaggcgctg acggtctggc tggatccggc gcatgtctat
      541 ctgttcaaca ccgatggcgg gctggcgcgc ggcgccgcct atgcggcggc ggcatgaggg
      601 catgagggca tgaggacacc atgaccgaga tcacgcttga aaacctggct cacagctatc
      661 tgcccgatcc gtccggcgac gcggactggg cgctgaagcc gatgaacctg acatggcgcg
      721 acggcggcgc ctacgcgctt ctgggcagtt ccggctgcgg aaaatcgacc ctgctgaaca
      781 tcatatccgg gctgctggtc ccctcgcagg gccgcgtcct gttcggcgag acggacgtga
      841 ccggcctgcc cacgcttgat cgcaacatcg cgcaggtgtt tcagttcccg gtcgtctacg
      901 acaccatgtc ggtgcggcag aacctggcct ttccgctgaa gaatcgcggc ctggccgagg
      961 atgtgatcaa gtcgcgcgtc gccgaggtgg ccgagatgat cggcatgacc gacgtgctgg
     1021 accgccgcgc ccgcggtctg accgcagatg ccaagcagaa gatcagcctc gggcgcggca
     1081 tggtccgcca ggatgtgaac gcgatcctgt tcgacgagcc
//
LOCUS       DTVW01000948            2435 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2171191, whole
            genome shotgun sequence.
ACCESSION   DTVW01000948 DTVW01000000
VERSION     DTVW01000948.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2435)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2435)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2435
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2171191"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            45..1076
                     /locus_tag="EYO87_12335"
     CDS             45..1076
                     /locus_tag="EYO87_12335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003572025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HIC66758.1"
                     /translation="MENAIGTADLENRIAAIFRKAGLADGQAAAMARNLAAAERDGCK
                     SHGIYRIEGCLKTVLAGKADPLAVPQLHDDGGGVIRVAAKGGFSSWAFSRGAPLLAER
                     AKRLGVAALVINDCVHLTALWPEIEDLTADGVAAMAMCPSYATVAPAGGSRPLLGTNP
                     FAFGWPRPGGNPYVFDFATSVAARGEIELHRRAGDPLPEGWAIDAEGRATTDPDAALA
                     GAMLPFGAHKGSAIATMIELLAGAMIGDLTSEAALAALGTTDLGPRHGELVLAFSPER
                     FAAGRPGEPFALAETLLDGIIGQGARLPSQRRFAARKDSIANGIRLTEAELALLDRLE
                     TGGLNAVAV"
     gene            complement(1199..>2435)
                     /locus_tag="EYO87_12340"
     CDS             complement(1199..>2435)
                     /locus_tag="EYO87_12340"
                     /EC_number="4.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005854263.1"
                     /note="Catalyzes the conversion of citrate to isocitrate;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="aconitate hydratase"
                     /protein_id="HIC66759.1"
                     /translation="AGLQEDLDAIGFDLVGYGCTTCIGNSGPLEPAISKSIADNDLIA
                     VSVLSGNRNFEGRISPDVRANYLASPPLVVAYALAGDMNVDLTRDPLGQDKDGNDVYL
                     KDLWPSTKEVADMVASIVTREMFIDKYADVFKGDERWRGVEVTDSETYDWPSSSTYIQ
                     NPPYFQGMSNDPGKIENIEGARILALLGDMITTDHISPAGSFKESTPAGKYLTERQVP
                     PREFNSYGSRRGNHEVMMRGTFANIRIRNEMLDGVEGGYTKGPDGGQESIYDAAMEYA
                     DKGVPLVLIGGIEYGAGSSRDWAAKGTNLLGVKAVIAESFERIHRSNLVGMGVIPFEF
                     TDGDTRKTLKLTGDEVISIEGLEGDFKPLSLVPCKITYADGTEKEIQIKARVDTEVEI
                     DYLKNGGVLHYVLRNLAAA"
BASE COUNT          403 a          786 c          812 g          434 t
ORIGIN      
        1 gcgccatttc tgcaagtctg gaaaagagtt gacagggggt caggatggag aacgcaatcg
       61 gcaccgcgga tctggaaaac cggatcgccg ccattttccg caaggccggt ctggctgacg
      121 gacaggcggc agcgatggcg cgcaaccttg ccgcggccga gcgtgacggc tgcaagtcgc
      181 acggcatcta ccggatcgaa ggttgcctga aaacggtcct ggcgggcaag gccgacccgc
      241 tcgcggtgcc gcagcttcat gatgacggcg gcggcgtcat ccgtgtcgcg gcgaaaggcg
      301 gcttttcgtc atgggccttt tcccggggcg ctccgctgct ggcagagcgc gcgaaacgac
      361 ttggcgttgc ggcgctggtc atcaacgatt gcgtgcatct gacggcgctg tggcccgaga
      421 tcgaggatct gaccgccgat ggcgtcgccg cgatggccat gtgccccagc tatgccaccg
      481 tcgcaccggc gggcggcagc aggccgctgc tgggcaccaa ccccttcgcc ttcggctggc
      541 cccgtccggg tggcaacccc tatgtgttcg acttcgcaac cagcgtcgcg gcgcgcggcg
      601 agatcgagct gcatcgccgc gccggcgatc ccctgcccga gggctgggcc atcgacgccg
      661 agggccgtgc caccaccgac ccggacgccg cgctggccgg cgcgatgttg cccttcggcg
      721 cgcacaaggg ttcggccatc gcgacgatga tagagttgct ggcaggcgcg atgatcgggg
      781 atctgaccag cgaggcggcg ctggcggccc tgggcacgac ggatctggga ccacgccacg
      841 gagagctggt tctggccttc agtcctgaac gtttcgcggc gggcagaccc ggcgagcctt
      901 tcgccttggc cgagacgctg ctggacggaa tcatcgggca gggcgcacgc cttccctcgc
      961 aacggcgttt cgcggcgcgg aaggacagca tcgccaacgg catccggctg accgaggcgg
     1021 aactcgccct gctggaccgg ctggagacag gtggcctgaa cgcggtcgcg gtctgaaatc
     1081 ggcctgtcgg ccaggcggga caggagagca cgacaggatc gggacgtcgg ggccacgccc
     1141 agcaaaaggg ggcgccggca tgtgcaggcg ccccccaggg ttggctatcc ccgccggatc
     1201 aggcggcggc gaggttgcgc agcacgtaat gcagcacgcc gccgttcttg agatagtcga
     1261 tctcgacctc ggtatcgacg cgggccttga tctggatctc cttctcggtg ccgtcggcat
     1321 aggtgatctt gcagggcacc agcgaaagcg gcttgaaatc gccctccagc ccctcgatcg
     1381 agatcacctc gtcgccggtc agcttcagcg tcttgcgggt gtcgccatcg gtgaactcga
     1441 acgggatcac gcccatgccg accaggttcg agcgatggat gcgttcgaag gattccgcga
     1501 tcaccgcctt gacgcccagc aggttcgtgc ctttggccgc ccagtcgcgc gaggaaccgg
     1561 caccgtattc gataccgccg atcaggacca gcgggacgcc cttgtccgca tattccatgg
     1621 ccgcgtcata gatcgattcc tggccgccgt cgggaccctt ggtatagccg ccctcgacgc
     1681 cgtccagcat ctcgttgcgg atgcggatat tggcgaaggt gccgcgcatc atcacctcgt
     1741 gattgccccg gcgcgacccg tagctgttga attcgcgcgg cggcacctgc cgttcggtca
     1801 ggtatttccc ggccggggtc gattccttga acgatcctgc gggcgagatg tgatcggtgg
     1861 tgatcatgtc gcccagcagc gccaggatgc gggcaccctc gatattctcg atcttgcccg
     1921 gatcgttcga catgccctgg aaatagggcg ggttctggat ataggtcgag cttgacggcc
     1981 agtcatatgt ttcgctgtcg gtcacctcga cgccacgcca gcgctcatca cccttgaaga
     2041 catcggcgta tttgtcgatg aacatctcgc gcgtgacgat gctggcaacc atgtcggcga
     2101 cctctttcgt gctcggccac agatccttca gatagacatc gttgccgtcc ttgtcctgcc
     2161 ccagaggatc gcgggtcagg tcgacattca tgtcgccggc cagcgcgtag gccacgacca
     2221 gcggcggcga ggccaggtag ttggcgcgca catcggggct gatccggcct tcgaagtttc
     2281 ggttgcccga caggaccgag accgcaatca ggtcgttgtc ggcgatggat ttcgagatcg
     2341 ccggttccag cggaccggaa ttgccgatgc aggtggtgca gccgtaaccc accagatcaa
     2401 agccgatggc gtccagatcc tcctgcagcc cggcc
//
LOCUS       DTVW01000949            1016 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2172180, whole
            genome shotgun sequence.
ACCESSION   DTVW01000949 DTVW01000000
VERSION     DTVW01000949.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1016)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1016)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1016
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2172180"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            144..>1016
                     /locus_tag="EYO87_12345"
     CDS             144..>1016
                     /locus_tag="EYO87_12345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011750720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine--N-acetylmuramyl-
                     (pentapeptide) pyrophosphoryl-undecaprenol
                     N-acetylglucosamine transferase"
                     /protein_id="HIC66760.1"
                     /translation="MAAPLALIAAGGTGGHMFPAQALAELMLAEGWRVALSTDERGAR
                     YAGAFPDAVQRSIVPAATTARGGIPGKLTAPFTIAAGIMAARRAFAGDRPSVVIGFGG
                     YPTIPALSAALSMGLPRMIHEQNGVMGRVNRLFAARVHRIACGIWPTALPRGVAGIHT
                     GNPVRASVLDHAASPYADPDEGGLNLVVIGGSQGARVLSDMVPAAIAVLPADLRTRLR
                     LSHQARSEDADRVAAAYDAAGVTADVQPFFADVPERLARAQLVISRAGASSIADITVI
                     GRPAILIPFAAAAGD"
BASE COUNT          136 a          369 c          333 g          178 t
ORIGIN      
        1 ccaattaact ccatgatttg atgggttact tcttccggtc gcgcactatc caaatcgact
       61 ttgttaatga tgggaatgct gctggcgctg acccgggccc gcccgcaggg cgaaatggcc
      121 gagatcctgc ggcgaggccg ctgatggccg caccgcttgc gctgatcgcg gccggcggca
      181 cgggcgggca catgtttccc gcccaggccc tggccgagct gatgctggcc gagggctggc
      241 gcgtcgcatt gtccaccgac gaacgcggcg cgcgctatgc cggggccttt cccgacgcgg
      301 tccagcgcag catcgttccc gcagccacca cggcgcgcgg gggcattcct ggcaagctga
      361 ccgcgccctt cacgatcgct gcaggcatca tggccgcgcg ccgcgccttt gccggcgacc
      421 ggccctcggt cgtcataggc ttcggcggct atccgacgat tcccgccctg tcggcggcgc
      481 tcagcatggg gctgccgcgc atgatccacg aacagaacgg cgttatgggc cgcgtgaacc
      541 gccttttcgc ggcgcgtgtc catcgcatcg cctgcggtat ctggccgacc gcgctgccgc
      601 gaggggtcgc gggcatccat accggcaatc cggtccgcgc ctcggtcctg gaccacgcgg
      661 ccagtcccta tgccgatccc gatgaaggcg gtctgaacct cgtggtcatc ggcggaagtc
      721 agggcgcgcg cgtcctgtcc gacatggttc ccgccgccat tgccgttttg cccgccgatc
      781 tgcgcacccg gctgcgccta agccatcagg cccgctccga ggacgcggat cgggtcgccg
      841 ccgcctatga tgcggcgggc gtaacggcgg atgtgcagcc cttcttcgcc gatgttcccg
      901 aaaggctggc gcgggcgcaa ctggtcatca gccgtgccgg tgcctcgtcc atcgccgaca
      961 tcacggtgat cggccggccc gccatcctga tccccttcgc cgctgccgcg ggcgac
//
LOCUS       DTVW01000950            2364 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2173612, whole
            genome shotgun sequence.
ACCESSION   DTVW01000950 DTVW01000000
VERSION     DTVW01000950.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2364)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2364)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2364
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2173612"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..623)
                     /locus_tag="EYO87_12350"
     CDS             complement(<1..623)
                     /locus_tag="EYO87_12350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66761.1"
                     /translation="MIRLLATSAVALIAGAAPVLAELTPAQVWDSLESYYTAMGYKVE
                     VGQRDESGDTLTVSDITLSPPAADTASTTTITVPKMILQQTGDAKVRTMIEGDTLIDS
                     ITTPPEGEPVEFDATVSLPDNEMISSGTPDAMTHEVVYPQIKVAATFTGGAAQDGKAP
                     LTILLNDVKGRQQNQDGTAGRITYDLSAAGVDIALSAKEPVQQDGSGG"
     gene            700..933
                     /locus_tag="EYO87_12355"
     CDS             700..933
                     /locus_tag="EYO87_12355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66762.1"
                     /translation="MIRRETRDGPAILTLDRPAPPNSLAEAMLRDLTARLDNLAVSDC
                     RAPVGAATALAADGPAASAAHAAAIRRMASVQA"
     gene            complement(924..1265)
                     /locus_tag="EYO87_12360"
     CDS             complement(924..1265)
                     /locus_tag="EYO87_12360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010391836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2853 family protein"
                     /protein_id="HIC66763.1"
                     /translation="MSKRDELIGKYAGDIRDKLGVEPDMDLLRKVTIGCGPSIYNNDA
                     ETVAASDEAELDRIRKNYLMKKLGLPDGPALMEGVHAVIDRYGRSNRSKYRAVVYYLL
                     CQHFKKQSVYA"
     gene            complement(1340..>2364)
                     /locus_tag="EYO87_12365"
     CDS             complement(1340..>2364)
                     /locus_tag="EYO87_12365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011750937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TRAP transporter large permease"
                     /protein_id="HIC66764.1"
                     /translation="GLGYANVLTSTLFAGISGSALADAAGPGAMMVRMMEKGGYSRAY
                     AGALTIATSVVGPIIPPSITMIIYALQDRNVSVGSLFMAGILPGLLISAAMAGVNWWI
                     SRKRGYRSAEPRPPVLQMIRNTVAALPALALVVLIVGGIRGGVFTPTEASVIAVVYAI
                     LVSAVIYRGFTFADLWGAFWRAGIMSVAVLMILAGARAFAWVLIIEGVPQAMADAVIA
                     MNLSPVAFLLMVNLLLLVFGMFMDPLPGVMILVPILAPIANSLGIAADHFAIIVIVNL
                     TFGLITPPVGGLIFVVASATNQRPSALIRELPPFFLAALVVLAILTFVPGLSTWLPAI
                     SGFSRG"
BASE COUNT          415 a          787 c          766 g          396 t
ORIGIN      
        1 ccgcccgagc cgtcctgctg cacaggctct ttcgcgctga gggcgatgtc cacgccggcg
       61 gcgctgagat cataggtgat ccggccggcc gtgccgtcct ggttctgctg gcggcccttc
      121 acgtcgttca gcaggatcgt caagggtgcc ttgccgtcct gcgccgcgcc gccggtgaag
      181 gtcgccgcaa ccttgatctg cggatagacg acctcgtggg tcatcgcgtc gggcgtgcct
      241 gaactgatca tctcgttgtc gggcagcgac acggtggcat cgaactcgac cggctcgccc
      301 tcgggcgggg tggtgatcga atcgatcagc gtatcgccct cgatcatcgt gcggaccttg
      361 gcatcgccgg tctgctgcag gatcatcttc ggcacggtga tcgtcgtcgt gctggccgtg
      421 tccgccgccg gcggcgaaag cgtgatgtcc gaaacggtca gcgtgtcgcc ggattcgtcg
      481 cgctggccca cctcgacctt gtaacccatc gcggtgtaat agctttcgag actgtcccag
      541 acctgcgccg gcgtcagttc ggccagaacc ggcgcggccc ccgcgatcag cgccacggcc
      601 gaggtggcaa gcaaacggat catgacggat acctttcgac acgaaattct ttgcgaaact
      661 gtctgacaca gcctcccgcg gagggaaagg gaacattccg tgatccgccg cgagacgcgc
      721 gacggtccgg ccatcctgac ccttgaccgc cccgccccgc ccaattccct ggccgaggcg
      781 atgttgcgcg atctgaccgc ccgcctcgac aatctggccg tgtccgattg ccgggcgccg
      841 gttggggccg cgaccgcact ggcggccgat ggccctgcgg catcggccgc ccatgccgcc
      901 gcgatcaggc ggatggcctc ggttcaggca tagaccgatt gtttcttgaa gtgctggcac
      961 agcaggtaat agacgaccgc gcggtatttg ctgcggttcg accggccgta tctgtcgatc
     1021 accgcgtgga cgccttccat cagtgccgga ccgtcgggaa gccccagctt tttcatcaga
     1081 tagttctttc ggatccggtc cagttcggcc tcgtcgctgg ccgcgacggt ttcggcgtcg
     1141 ttgttgtaga tcgacggacc gcagccgatc gtcaccttgc gcagcaggtc catgtcgggt
     1201 tcgaccccca gcttgtcgcg gatgtcgccg gcatatttcc cgatcagttc gtcacgcttg
     1261 ctcatctctc cctccgggtt ttcgtatcgg accggggcag gatgcggcga ggtctgacat
     1321 ttatcaacaa attccgcccc tagccgcgcg agaagccgct gatggcgggc agccaggtcg
     1381 aaaggccggg cacgaaggtc aggatcgcca gaaccaccag cgcggccaga aagaagggcg
     1441 gcaattcgcg gatcagcgcc gaggggcgct ggttggtggc cgaggcaacg acgaagatca
     1501 ggccgccgac cgggggcgtg atcagtccga aggtcaggtt gacgatcacg atgatcgcga
     1561 agtgatcggc ggcgatgccg aggctgttgg cgatgggtgc caggatcggc acaaggatca
     1621 tcacccccgg cagcgggtcc atgaacatgc cgaagaccag cagaagcagg ttgaccatca
     1681 gcagaaaggc gacgggcgac aggttcatcg cgatcaccgc gtcggccatc gcctgcggca
     1741 cgccctcgat gatcagcacc caggcaaagg cgcgcgcgcc ggcaaggatc atcagcaccg
     1801 cgaccgacat gatcccggcc cgccagaacg ccccccagag atccgcgaat gtgaagccgc
     1861 gatagatcac ggcgctgacg aggatcgcat agacgacggc gatgacggat gcctcggtcg
     1921 gcgtgaacac gccgccgcgg atgccgccca cgatcagcac caccagagcc agcgccggca
     1981 gcgcggcgac ggtgttgcgg atcatctgca ggacgggcgg acgcggttcg gcgctgcgat
     2041 agccgcgctt gcggctgatc caccagttca ccccggccat cgcggcggaa atcagcagcc
     2101 ccggcaggat cccggccatg aacagcgacc ccaccgacac gttgcggtcc tgcagcgcat
     2161 agatgatcat cgtgatcgag ggcgggatga tcgggccgac gaccgatgtg gcgatggtca
     2221 gcgccccggc ataggcgcgg ctgtagccgc ccttctccat catccgcacc atcatcgccc
     2281 ccggccccgc cgcatccgcc agcgccgagc ctgaaattcc cgcgaacagg gtcgaggtca
     2341 ggacattggc atagcccagc ccgc
//
LOCUS       DTVW01000951            4012 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2173622, whole
            genome shotgun sequence.
ACCESSION   DTVW01000951 DTVW01000000
VERSION     DTVW01000951.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 4012)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4012)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4012
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2173622"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..633)
                     /locus_tag="EYO87_12370"
     CDS             complement(<1..633)
                     /locus_tag="EYO87_12370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009803546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaconate CoA-transferase"
                     /protein_id="HIC66765.1"
                     /translation="MEERPELCLGGLFKQSRPVALVRALLAAGADGLHVYSSPGAGYD
                     VDLMIAAGAVAQVFIPGVTLENRLCPNFRRAVEAGQVTAHALDALTVVGGLMASAHGV
                     PFQPIDALRGSDVLKHNPLLHEIDCPFSGRRIHAVGPIRPRVTFLHAQEADRWGNLRH
                     LSTMVYADQLMARASDMVIASVDRIVPDEVVLDDPSRVTVPSYYVDAVVEV"
     gene            complement(858..2285)
                     /locus_tag="EYO87_12375"
     CDS             complement(858..2285)
                     /locus_tag="EYO87_12375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009803547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66766.1"
                     /translation="MSPVERLKRSGKRNRFTAICLLICLGAAIIQGVLPSAVASIAAA
                     PFFCIYLAISSRYIARVGWVLLFFSLAIALLALANGIDPGIFVQAAGRVVFLSALLTA
                     VAFLRIAATQDPIVEVAGEFLTLQPPTRRYASLGAGGHLFGVLLNLGGLGVMLEIIMK
                     GLAAHRHEMDEFVFQARKRRMVSACMRGFSSIAFWTPFGIALNLMILTIPGLEWTTLA
                     PYGIALAGILFLLGWLFDTVEWWRPPSARGRAPALSGDLPDWSPWAVLIVSGHVLFLG
                     AAVVTLDRLTQYSFQTVLITIVPIYALLWSVMRSGSGSLAGISRRFVTQAPGFATEMS
                     VIASAGFIGLVALEVVPVEWIADHLGWIATRPVLTVVLLIMTVFLTGLLGVHPMISVV
                     LLAEVVNRVGVEGLSPLALGLALAGGWSSIICMGPAITAVVYASSIVGERPLTIGLRW
                     NGIFGVASILLITLIVGGGVAAGWF"
     gene            2795..>4012
                     /locus_tag="EYO87_12380"
     CDS             2795..>4012
                     /locus_tag="EYO87_12380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009803548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmgE/PrpD family protein"
                     /protein_id="HIC66767.1"
                     /translation="MISDFTIRLSRFVAAPHRLSVADAEQAALCVEDTIAAIYGGWHE
                     PVVRRLAALDAGGPAVPAGAAEGGSPEQAAFLNAVAGHALDFDDVHTVSVTHPSVVIV
                     SALLATVDVRPDTAGRIAPALAVGTAVNVALGQILGFGHYNKGWHATSTIGVLASAAA
                     VAHQLGLDDDAVRNALSLAASLAGGMQINFGAMAKPIQAGNAALVGLRATRMAEAGIT
                     GAPDIFAARGFFDLYAGPDGIAADPAAVEPRIDLGTVSRKLYPCCYLTHRMIAAGRHL
                     HAERGGEAVPEGSVIEMTVPESVMVPLHVTDPKDGMQAKFCAAYTLAVALQQGQVGLV
                     DFEGDSPHRPAVRRLMDMVHIQTMPEAGRDHAGVDHGTVHVRLRKGNVTLAETSVAAH
                     PGSPSDPATPAAIG"
BASE COUNT          828 a         1311 c         1235 g          638 t
ORIGIN      
        1 cacctcgacc acggcatcga cataataaga cggcacggta acccgcgagg gatcgtccag
       61 aacgacctcg tccggcacga tccggtccac gctggcaatg accatgtcag acgcgcgtgc
      121 catcagctga tcggcgtaga ccatcgtgct gagatggcgc aggtttcccc aacggtcggc
      181 ttcctgcgcg tgcaagaacg tcactctggg gcggatcggc ccgacggcgt gaatacggcg
      241 gccggagaac gggcagtcga tttcgtgcaa aagcgggttg tgcttcagaa cgtccgatcc
      301 gcgcagcgcg tcgattggct ggaacggcac gccatgagcc gacgccatca gcccgcccac
      361 cacggtcagc gcatccagcg cgtgcgcggt cacctgccct gcctcgaccg cgcggcggaa
      421 attggggcaa agccggtttt ccagcgtaac gccgggaata aagacctgtg cgaccgcgcc
      481 tgccgcaatc atcaggtcga catcataccc cgcgcccggc gaggaataca catgcagacc
      541 atctgcgccc gcggccagca acgcgcgcac cagtgcgaca gggcggcttt gcttgaacag
      601 accaccgaga caaagctcgg ggcgttcttc caaagcgcct cgtgccagcc gggctgcgtc
      661 ttgcaggcct gtgaccttgc tgcgacgtgt gggtttcgct tggccttcca tcgttgggcg
      721 tgccactccg atagtgattg cgctgaccca tcctagttga cgctatgggg tccatcacct
      781 tccgactagc gcaaagcctg atcgaacaca tatgtggaaa tgcttgcgcc cggttcctga
      841 caggcaattg agaccggtca gaaccaccct gccgcgacac cgccgccaac gatgagcgtg
      901 atgaggagga tgctcgcaac accgaagatc ccgttccacc gcaagccgat ggtcagcggc
      961 cgctcgccca cgatggagga ggcgtagacc accgccgtga tggccggtcc catgcagatg
     1021 atgctgctcc agccaccagc cagtgcaagg cccagagcaa gcggcgacaa accttccacg
     1081 ccgacgcggt tgaccacctc tgccagcagg accaccgaga tcatcggatg cacgcccagc
     1141 agccccgtca gaaacaccgt catgatcaac agcacgacgg tcagcacagg ccgcgttgcg
     1201 atccagccaa gatggtcggc aatccattcg accggaacga cctccagcgc gacgaggccg
     1261 atgaaccccg ccgacgcgat gacgctcatt tcggtcgcga aacccggtgc ctgggtcaca
     1321 aaccggcgcg atataccggc aaggctgcca ctgccgctgc gcataaccga ccagagcagc
     1381 gcatagatcg gcacgatggt gatcaggacg gtctggaaac tgtactgggt caaccggtcc
     1441 agcgtgacca cggcggcgcc caaaaaaagc acatgcccgg acacgatcag gacggcccag
     1501 gggctccagt ccggcaagtc accgctcagg gccggtgccc ggccgcgcgc cgagggcggg
     1561 cgccaccatt ccaccgtgtc gaacagccat cccagaagaa acagaatccc ggccagagca
     1621 atcccgtaag gcgccagggt cgtccattcg agccccggta ttgtgagaat catcagattg
     1681 agagcgattc cgaacggcgt ccagaacgcg atcgaggaaa acccccgcat acaggcgctc
     1741 accatcctgc gcttgcgagc ctggaacacg aattcgtcca tctcgtgccg atgcgccgcc
     1801 agccctttca ttatgatctc cagcatcacc ccaagcccgc cgagatttag aagcaccccg
     1861 aacagatgcc cgcccgcacc cagagaggcg tagcgacggg tcggcggctg cagtgtcagg
     1921 aattcaccgg caacctcgac aatcgggtct tgggtggccg cgatgcgcag gaaggcgaca
     1981 gccgtcagca gagcggacag gaacacgacg cgccccgccg cctggacgaa gatgccgggg
     2041 tcgattccat tggccagcgc cagaagggcg atcgcgagcg agaagaaaag cagcacccat
     2101 ccgacacggg cgatgtagcg ggacgaaatg gcaagataga tgcagaaaaa cggcgcggca
     2161 gcgatggacg cgacggcgga gggcaagaca ccctgaatga tggcagcgcc aagacaaatc
     2221 agcagacaaa tggccgtaaa cctgttgcgc ttgccggaac gtttcaggcg ctcgacaggc
     2281 gacatctgcc cccccttttc cgaaggcgct cgttgtgtct gtgacgcaac ggcagatgcg
     2341 gtctttcatg gcacgacggc ggaaatgcga tgccgacaat ttcccattca caggcaagga
     2401 cacacaaggt gctcatcttg tcggcgcagg gcggactagc ccggatttgt ggtggcactg
     2461 accgccttgg ttccgggcct ccgaggatac atcgtctggc ggtcaatgac acaacgatgc
     2521 ctcgaaatgt ctctccgcac atgcgtgctt gtctgcccga cttttcacgc cgataccctc
     2581 aaccacgtct gttcttcttt ccgaagttct acggtcacgt ccaacgcccg atcctgcacg
     2641 gaaacagagg aaggatgagc acccagaata tccaacggca gcaaggatca caacgcaagc
     2701 atcccgctcc aacacatatg tgcgaaagag tggggccgag agttgatagc gcccgccttg
     2761 atgaggcaat atgcagtgtc agagaaagaa gtggatgatc agcgatttca ccatccgttt
     2821 gtcgcggttc gtcgccgcgc cgcaccggct gagcgttgca gacgccgagc aggccgcgct
     2881 ttgcgttgag gataccatag ccgccatcta tggcgggtgg catgaaccgg tggttcgccg
     2941 gctggcggcg cttgacgcgg gcggaccggc agtcccggca ggagctgctg aaggtggcag
     3001 tcccgaacag gccgcgttcc tgaacgcggt tgccggtcat gcgctcgatt tcgacgatgt
     3061 ccatacggtc agcgtcaccc atcccagtgt tgtaatcgtg tcggcgctgc tggccaccgt
     3121 ggatgtccgg ccggacacgg ccggccgcat tgcccccgcg cttgcggtcg gaacagccgt
     3181 caatgtcgcg ctcggtcaga tcctgggttt tggccactac aacaagggct ggcacgcaac
     3241 gtcgaccatc ggggttctgg catcggcggc agcggtcgcg catcagcttg ggctcgacga
     3301 cgacgcagtc cgcaacgccc tgtccctggc cgcgtcgctg gccgggggaa tgcagatcaa
     3361 tttcggcgcc atggcgaaac cgatccaggc cggaaacgcc gcccttgtcg gattgcgggc
     3421 cacccggatg gccgaggccg gcatcacggg cgccccggac atcttcgcgg cgcgcggctt
     3481 cttcgacctt tatgccggcc cggacgggat tgcggccgac cccgcagcgg tggaaccgcg
     3541 gatcgatctg ggcacggtgt cccgcaagct gtatccctgc tgctacctca cccacaggat
     3601 gatcgccgcc gggcggcacc ttcacgccga acgcggcggc gaggcggtgc ccgaaggatc
     3661 ggtgattgaa atgacagtgc ccgaaagcgt catggtcccg ttgcatgtca ccgaccccaa
     3721 agatggaatg caggccaagt tctgtgccgc ctatacgctc gccgtggccc tgcagcaggg
     3781 ccaggtcggg ctggtggatt tcgaagggga cagcccccat cgccccgcgg tgcgccggct
     3841 tatggacatg gtgcatatcc aaaccatgcc ggaagcgggg cgggatcacg ctggcgtgga
     3901 ccatgggacg gtccatgtcc gcctgcgcaa agggaacgta accctggccg aaacctcggt
     3961 cgcggcgcac cccggctctc cctcggatcc ggcaacccct gccgcgatcg gc
//
LOCUS       DTVW01000952            2707 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2182088, whole
            genome shotgun sequence.
ACCESSION   DTVW01000952 DTVW01000000
VERSION     DTVW01000952.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2707)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2707)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2707
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2182088"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..311
                     /locus_tag="EYO87_12385"
     CDS             <1..311
                     /locus_tag="EYO87_12385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013068480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HIC66768.1"
                     /translation="SLQSRNRLEGLRCHPRALLFDEPTSALDPELQQEVVKVIKDLAA
                     EHRTMILVTHDMRLAADVSDHVVFLHQGVICEEGPPDRLFNDPQTQRLRQFLSATMAA
                     "
     gene            360..1085
                     /locus_tag="EYO87_12390"
     CDS             360..1085
                     /locus_tag="EYO87_12390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007119314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HIC66769.1"
                     /translation="MKKLILAAAALALTAGMGMAQTIRMGTEGAYPPYNFINDAGEVD
                     GFERELGDELCKRAKLDCTWVTNDWDSIIPNLVSGNYDTIMAGMSITPEREQVIAFSQ
                     NYTPPADSAYAALSADADIEAGVIAAQTGTIQAAHVAETGATLLEFATGDETIAAVKN
                     GEADAVFADKDFLAPSVAESNGELVWAGEAVALGGGIGIGMRQSDTDLKKTFDTAIQS
                     MKDDGSLNEMIVKWFGEDAKVFE"
     gene            1130..2011
                     /locus_tag="EYO87_12395"
     CDS             1130..2011
                     /locus_tag="EYO87_12395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018000405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HIC66770.1"
                     /translation="MFAQCADPKALEGLSWLMCYLTSGKHLLFYASFGTVLLLLAVTA
                     PLALLFGFGGAMASRSRIAPLRWFGKIYTAMVRGIPDIIFFLFVPIALDQGIEFLRSR
                     ALCDNPVSPWQGNEFNVCAAAKMPLSTSPEWVHEGYGFTLAVVAFSVVFGAFAANVLY
                     GAMNAVPRAQLETAEAYGMSQRQVNRRVLIPQMWTYALPGLSNLWMILIKATPLLFLL
                     GIQDIVYWARDLGGAKTQAFSYPHPDWRLYYFLAILVFYLLMTWVSERVLARLTRRLS
                     AGQATMGGEALRQAGPA"
     gene            2011..>2707
                     /locus_tag="EYO87_12400"
     CDS             2011..>2707
                     /locus_tag="EYO87_12400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_353450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HIC66771.1"
                     /translation="MPCAEDIGNYALRSVGIGERLLPRSDFTLCNQVTLIGSGMIWNL
                     YFAAMALFFGFFLANALAVAKASRNPWARKPAEGFVFLFRGSPLFIQFFLAYQALVML
                     PRAGIEVMGFTVATSWLTKAWAGALLVLILNTSAYSAQIFHGALMSVPKGDLEAADAY
                     GLTGWAKFRRVTWPTMMRLAWPSYTNEAIFLFQATALVFFSGFPAFQQRGDALYYASY
                     FADKTFNPFVAYPI"
BASE COUNT          468 a          835 c          851 g          553 t
ORIGIN      
        1 cctcgctcca atcccgcaac cgtctcgaag gccttcgatg ccatccgcgc gcgctgctgt
       61 tcgacgagcc gaccagcgcg ctggatccgg aattgcagca ggaagtcgtc aaggtgatca
      121 aggatcttgc ggcggaacac cgcacgatga tccttgtcac ccacgacatg cggctggccg
      181 ccgatgtcag cgaccatgtc gttttcctgc atcagggcgt gatctgcgag gaaggaccgc
      241 cggaccggct gttcaacgat ccgcagaccc agcggttgcg ccagttcctc agcgcgacga
      301 tggccgccta aggttcacca gactcggaat tcacaagaga cgaccaacag gagagaaaaa
      361 tgaaaaaact gatccttgcc gccgccgccc tcgcgctgac cgcgggcatg ggcatggccc
      421 agacgatccg catgggcacc gagggcgcct atcctccgta taacttcatc aacgatgcgg
      481 gcgaggtcga tggcttcgaa cgcgaactgg gcgatgaatt gtgcaaacgc gccaagctgg
      541 attgcacctg ggtcacgaat gattgggatt cgatcattcc gaacctcgtt tcgggcaatt
      601 acgacacgat catggccggg atgagcatca cccccgagcg cgagcaggtg atcgccttca
      661 gccagaacta tacgccgccc gccgatagcg cctatgcggc gctgtctgcg gatgccgaca
      721 tcgaagccgg cgtgatcgcc gcgcagaccg gcacgatcca ggccgcccat gtggccgaaa
      781 ccggtgcgac gctgctggaa ttcgcgaccg gagacgaaac catcgccgcc gtcaagaacg
      841 gcgaggccga cgccgtcttc gccgacaagg atttcctggc accctcggtc gcggaatcga
      901 atggcgaact ggtctgggcc ggcgaagcgg tcgcgcttgg cggcggtatc ggcatcggga
      961 tgcgtcaatc cgataccgat ctgaagaaga cgttcgacac cgccatccag tcgatgaagg
     1021 atgatggcag cctgaacgag atgatcgtga aatggtttgg cgaagacgcc aaggttttcg
     1081 aatgatctga aaaggttggc cgcgtctttt cggtcgcggc cgcaatccga tgttcgccca
     1141 gtgcgccgat ccgaaagccc ttgaagggct gagctggctg atgtgttacc tcacatcggg
     1201 caagcatctg ctgttctatg ccagtttcgg cacggtgctg ctgttgctgg cggtgaccgc
     1261 gccgctggca ctgctgttcg gctttggcgg cgcgatggcc tcgcgttcgc ggatcgcgcc
     1321 cctgcgctgg ttcggcaaga tctacaccgc gatggtgcgg ggcatccccg acatcatctt
     1381 ctttctgttc gtgcccatcg cgctggatca ggggatcgag ttcctgcgca gcagggccct
     1441 gtgcgacaac cctgtctcgc cctggcaggg caacgagttc aacgtctgcg cggcggccaa
     1501 gatgccgctg tcgacgagcc cggaatgggt tcatgaagga tatggcttca cgctggcggt
     1561 ggtcgccttc tcggttgtct tcggcgcctt tgcggccaat gtcctctatg gcgcgatgaa
     1621 tgcggtcccg cgcgcgcagc tggaaaccgc cgaggcctat ggaatgagcc agcggcaggt
     1681 gaaccgccgc gtcctgattc cgcagatgtg gacctatgcg ctgcccgggc tttccaatct
     1741 gtggatgatc ctgatcaagg cgacgccgct gctgttcctg ctgggaatcc aggatatcgt
     1801 ctattgggcg cgggatctgg gcggtgccaa gacgcaggct ttcagctatc cccatcccga
     1861 ctggcggctc tattattttc tggccatcct ggtcttctac ctgctgatga cctgggtctc
     1921 tgaacgggtg ctggctcggc tgacccggcg gctttcggcc gggcaggcga cgatgggcgg
     1981 cgaggcgttg cgccaggcgg ggccggcatg atcccctgtg ccgaggacat cggcaattac
     2041 gccctgcgtt cggtcggcat cggcgagcgg ctgttgccgc gcagcgattt caccctctgc
     2101 aaccaggtca cgctgatcgg atcgggcatg atctggaatc tctatttcgc ggccatggcg
     2161 ttgttcttcg gcttctttct ggccaatgcg ctggctgtcg ccaaggccag ccgcaatccc
     2221 tgggcgcgca agccggcgga aggctttgtc ttcctgttcc gcggcagccc gctgttcatc
     2281 cagttcttcc ttgcctacca ggcgctggtg atgctgccac gggcgggaat cgaggttatg
     2341 ggcttcacgg tcgcgacaag ctggctgaca aaggcttggg cgggggcgct gctggtgctg
     2401 atcctgaaca cctcggccta ttcggcgcag atctttcacg gcgcgctgat gtcggtgccc
     2461 aagggcgatc tggaggccgc cgatgcctat ggcctgaccg gctgggccaa gttccgccgg
     2521 gtaacgtggc ccacgatgat gcggctggca tggccgtcct ataccaacga ggcaatcttt
     2581 ctgttccagg cgacggcgct ggtcttcttt tccggctttc cggctttcca gcagcgcggg
     2641 gatgcgcttt attacgccag ctatttcgcc gacaagacct tcaacccctt tgtcgcctat
     2701 cccatcg
//
LOCUS       DTVW01000953            5442 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2184192, whole
            genome shotgun sequence.
ACCESSION   DTVW01000953 DTVW01000000
VERSION     DTVW01000953.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 5442)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5442)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5442
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2184192"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1838
                     /locus_tag="EYO87_12405"
     CDS             <1..1838
                     /locus_tag="EYO87_12405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phage terminase large subunit family protein"
                     /protein_id="HIC66772.1"
                     /translation="PGRYRTARAPYLREIMDALSPGHPAQRITFMKAAQVGATEAGNN
                     WIGFVIHHAPGPMLAVLPSLELAKRTSRGRLAPLIADSPALRERVNPARSRDAGNSML
                     SKEFPGGILVLTGANSATGLRSMPARYVFLDEVDAYPASADEEGDPVTLAEARTTTFS
                     HRRKVFMVSTPTIRGLSRIEREFEASDQRRYFVPCPHCGAMQWLQFDRLRWAKGKPET
                     AAYHCEGCERPIAEHHKTEMLARGEWRATAVSRDPKAIGFHLSALYSPLGWKSWSDVA
                     REWLAAQGSDETLRAARNTLLGETWVESGDAPEWQRLADRREAWKPGTVPMAGLFLTA
                     GADVQRDRIEVDIWAWGRGLESWLVDHIVIPGGPDDPAAWDKLTALLGRTWQHANGAF
                     MTVARLGIDTGYEAAAVYAWSRKVGFEQVAPLKGLEGFNRSAPVSGPTYVDATIGGKR
                     LRRGARLWSVATATFKAETYRFLRIERPSDEDRALGVLDAPGTIHLPGWADTEWLKQL
                     VAEQLVTICNKRGYAHQEWQKMRERNEALDCRVYARAAAWILGADRWDEATWRRLEAQ
                     AGVETRLPVAVVTDTAPPDPAQPKAGTLTTPRRKRRAYTPNFMRD"
     gene            1838..2050
                     /locus_tag="EYO87_12410"
     CDS             1838..2050
                     /locus_tag="EYO87_12410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008032462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66773.1"
                     /translation="MDLERMQALLTALQEARFAGLRSVSYDGKTVTYGSDAELATAIR
                     DLEGRIATASATPRRRRWGSVATKGL"
     gene            2053..3564
                     /locus_tag="EYO87_12415"
     CDS             2053..3564
                     /locus_tag="EYO87_12415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage portal protein"
                     /protein_id="HIC66774.1"
                     /translation="MVLDAFRARLGSIIGGFDAAQSHRRMRGFRATRAHVNTLIAASG
                     ETITARARWLVRNNGYAANAVDAFANHVVGDGIKPSSKIVDAVKKEELQKLWLAWTDE
                     ADAEGLTDFFGLQRRAAREVFLAGEVFLRIRTRRPEDGLSVPMQLQMLPSEMLPQDMT
                     RVLPGAGSIRQGIEFDRIGRRVAYHFLRRHPGDMTDPGLVGETVRVPASEVIHILDPV
                     EAGQLRGVSRFAAAVVKLFTLDLYDDAELERKKTAAMFAMFITSPAPETALDPAEDDL
                     EVEPGQVVRLDPGEDVTTPSTPDSGSTYEPFQYRTLLQIGAALGVPYGYLTGDTAKGN
                     FSNTRIALVDFRRRISAFQHSVMVYQLCRAVWMRWMDMAVLAGAIDLPGYATDRRAYL
                     ACDWLPTKWDWIDPAKDAAAEILQIEAGLKSRTQAIAERGYDAEQVDREIAAERKREA
                     ALGLDFRRPGSPAQAAGGGAGQGNTEGQQEDQQEEGNQQEDGGDREARPAEDA"
     gene            3564..4880
                     /locus_tag="EYO87_12420"
     CDS             3564..4880
                     /locus_tag="EYO87_12420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009810009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S49 family peptidase"
                     /protein_id="HIC66775.1"
                     /translation="MHHTQIAQRVFNTPLMVDPAKALAFLTGLGPRITGREISVEGVE
                     IAAEAQEAASQSVRASLFGDDLTKRQARNGSQPFAVVDGIAVIEIAGTLVHRGAWIGQ
                     SSGLTSYEGIAAQLQAALADPTIRGIALDIDSFGGEVAGAFDLADRIRAARAQKPVHA
                     FVADHALSAAYALASQADRIVLPRTGTVGSIGVVAMHSDMSGALDQKGIAVTLIHAGT
                     RKVDANPYQPLPEAVRERIAGELEDLRQLFAETVAEGRGRRLDTLQALGTEAAVFRGE
                     AAVFAGLADEVADPVTAFHAFAAAHRGTSTLTSTPKGKGPMMTTAPEDHAQPAPAASP
                     LPEPAAPTAIAPPQTTAATMSPEAIRAEAAEVAQVCAQAARLGIQIDAADAVAKGVKP
                     EALRAKILADLAARSDAAGIIATAPAPGAKESPIVAAAKKSAAASR"
     gene            4934..5314
                     /locus_tag="EYO87_12425"
     CDS             4934..5314
                     /locus_tag="EYO87_12425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008032465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="head decoration protein"
                     /protein_id="HIC66776.1"
                     /translation="MPVLTEPPSMGDVLKYEVNPNYTREVVTLLAGLPYPVGSVLGKI
                     TASGKYTLSPATGADGSQVATAVLLYAVDATLADATGIVLVRGPSIVSRAALAYGATV
                     DDGTKIAVKLTQLATVGIIARDGV"
BASE COUNT          927 a         1888 c         1822 g          805 t
ORIGIN      
        1 agcccgggcg ctatcggacg gctcgcgcgc cctacctgcg cgagatcatg gatgcgctct
       61 cgcccggcca tccggcgcag cgcatcacct tcatgaaggc cgcgcaggtg ggcgcgaccg
      121 aggccgggaa caactggatc ggctttgtga tccaccacgc gccggggccg atgctggcgg
      181 tactgcccag cctcgaactg gcgaagcgca cctcgcgggg ccgattggcc cccctgatcg
      241 cagacagccc ggcgctgcgc gaacgggtga acccggcccg gtcgcgggat gcgggcaact
      301 cgatgctgtc gaaggaattc cccggcggca tcctcgtgct gaccggcgcg aacagcgcca
      361 ctggcctgcg gtcgatgcct gcgcgctatg tgtttctgga cgaggtcgac gcctatccgg
      421 cgtcggccga cgaggaaggc gatccggtca cgctggccga ggcaaggacc accaccttct
      481 cgcaccggcg caaggtgttc atggtgtcga cccccacgat ccgggggctg tcccggatcg
      541 agcgcgagtt cgaggcgtcc gaccagcggc gctacttcgt accctgcccg cattgcgggg
      601 cgatgcagtg gctgcagttc gaccggctgc gctgggcgaa ggggaagccg gaaacggcgg
      661 cctatcactg tgagggctgc gagcgtccta tcgccgagca ccacaagacc gaaatgctag
      721 cccgcggcga atggcgggca acagcggttt ccagggatcc gaaggccatc ggcttccacc
      781 tgtcggcgct ctattcgccc ttgggctgga aaagctggtc cgatgtcgcg cgcgaatggc
      841 tcgcggccca agggtcggac gagacgctgc gcgcggcgcg caacacgctt ctgggcgaga
      901 catgggttga aagcggagac gcgccggagt ggcagcggct tgcagatcgg cgcgaagcct
      961 ggaagccggg cacggtgccc atggccggac tgttcctgac ggccggggcg gacgtccaga
     1021 gggaccgcat cgaggtggac atctgggctt ggggccgggg tctcgaaagc tggctcgtcg
     1081 atcacatcgt catcccgggc gggccagacg atccggcggc gtgggacaag ctgaccgccc
     1141 ttctcggccg gacgtggcag cacgccaacg gtgccttcat gaccgtggcg cggttgggca
     1201 tcgacaccgg ctacgaggcc gcagccgtct atgcctggtc gcgcaaggtc gggttcgaac
     1261 aggtcgcgcc gctgaagggc ctcgaagggt tcaaccgttc ggctcccgtt tctggcccga
     1321 cctatgtcga tgccaccatc ggtgggaagc ggctccgccg cggcgcgagg ctctggtcgg
     1381 tggcgacggc gacgttcaag gcggagacct accgcttcct gcggatcgaa cggccctccg
     1441 acgaggaccg ggcgctgggc gtgctggacg cgccgggcac gatccatctt cccggctggg
     1501 ccgacaccga atggctgaaa caactggtag ccgagcagct ggtcacgatc tgcaacaagc
     1561 gcggctatgc ccatcaggaa tggcagaaga tgcgcgaacg gaacgaggca ctggactgcc
     1621 gggtctatgc ccgtgctgcg gcgtggatcc ttggcgccga ccgctgggac gaggccacct
     1681 ggcggcggct ggaagcacag gcgggcgtcg aaacccgcct gccagtggcc gtcgttaccg
     1741 acacagcacc acccgatccg gcccaaccca aggccggaac cctgaccacg ccacgtcgga
     1801 aacggcgggc ctacaccccg aacttcatga gggactgatg gacctggaac gcatgcaggc
     1861 cctgctcacg gcactgcagg aagcccgctt cgccgggctg cgcagcgtca gctatgacgg
     1921 caagaccgtg acctatggct cggacgccga actggcgacg gcgatcaggg atctggaagg
     1981 ccggatcgcg accgcctctg ccacgccgcg gcgtcgccgc tggggcagcg tggccacgaa
     2041 gggtctgtga ccatggtcct cgacgccttc cgcgcgcggc tcgggtccat catcggcggg
     2101 ttcgacgcgg cgcagtccca tcggcgcatg cgcgggttcc gggccacccg ggcgcatgtg
     2161 aacacgttga tcgccgcctc aggcgagacc atcaccgccc gggcgcgctg gctcgtgcgc
     2221 aacaatggct acgccgcgaa tgccgtcgat gcctttgcca atcacgtcgt cggtgatggg
     2281 atcaagcctt cctcgaagat cgtggacgcg gtgaagaagg aggagttgca aaagctctgg
     2341 ctcgcctgga ccgacgaggc cgatgccgag gggctgacgg atttcttcgg cctgcagcgc
     2401 cgggcggccc gcgaggtgtt tctggcgggc gaggttttcc tgcgcatccg cacgcggcgg
     2461 ccggaagacg ggctgagcgt acccatgcag ctgcaaatgc tgccctcgga aatgctgccg
     2521 caggacatga cccgcgtact acccggtgcg ggatcgatcc ggcagggcat cgagttcgac
     2581 cggatcggcc gccgcgtggc ctatcacttc ctgcgccgcc atccgggcga catgacggat
     2641 ccgggtctgg tgggtgaaac ggtgcgcgtg cccgcgtccg aggtcatcca catcctcgac
     2701 ccggttgagg caggccagct gcgcggcgtg tcgcgctttg cggcggcggt ggtgaagctc
     2761 ttcacgctgg acctctacga cgacgcggaa ctggagagga agaaaaccgc ggcaatgttc
     2821 gcgatgttca tcacctcccc cgccccggaa accgcgctcg atccagcaga agacgatctg
     2881 gaggtcgaac ccggccaggt tgtgcgcctt gatccgggcg aagatgtcac cacgccatct
     2941 accccggact cgggcagcac ctacgaaccc ttccagtacc gcacgctcct gcagatcggc
     3001 gcggcgctgg gcgtgcccta tggctacctg acaggcgaca cggcgaaggg gaacttctcg
     3061 aacacccgga tcgcgctggt cgatttccgc cgccgcatct cggccttcca gcattcggtg
     3121 atggtctacc agctatgccg cgctgtctgg atgcggtgga tggacatggc cgtgctggcc
     3181 ggggccatcg acttgccggg ctatgcgacc gaccggcgcg cttacctcgc ctgcgactgg
     3241 cttcccacga aatgggactg gatcgacccg gcgaaggacg ccgcggccga gattctgcag
     3301 atcgaggcgg gtctcaaatc ccgcactcaa gccatcgccg agcgcggcta cgacgcagag
     3361 caggtagacc gggaaatcgc cgccgaacgc aaacgcgagg ccgcgcttgg tctcgacttc
     3421 cggcggccgg ggtcccccgc gcaggcggcc ggtggcggcg cggggcaagg caacactgag
     3481 ggccagcagg aagatcagca ggaggaaggc aatcagcaag aggatggcgg agaccgggaa
     3541 gcccggcccg cggaggacgc atgatgcacc acactcagat cgcccagcgc gtcttcaaca
     3601 cgcccttgat ggtcgatccc gccaaggcgc tggccttcct gaccgggctt ggtccgcgga
     3661 tcaccggcag agaaatcagt gtcgaggggg tcgaaatcgc cgcggaagcg caggaggccg
     3721 ccagccagtc cgtccgggcg tctttgttcg gggatgatct gaccaagcgc caggcacgga
     3781 acggaagtca gcccttcgcc gtggtggacg ggatcgccgt gatcgagatc gctggcacgt
     3841 tggtgcatcg cggtgcgtgg atcgggcaat cctccggtct gacctcctac gaggggatcg
     3901 cggcccagct gcaggcagcg ctggccgacc ccaccattcg tggcatcgcc ctcgacatcg
     3961 acagcttcgg tggcgaggtc gcgggggcct tcgatctggc ggatcgcatc cgcgcagcga
     4021 gggcgcagaa gccggtccat gccttcgtcg ccgatcacgc cctctcggcc gcctatgcgc
     4081 tggcctccca ggccgaccgg atcgtcctgc cccgtaccgg gaccgttggc agcatcggtg
     4141 tggtggccat gcacagcgac atgagcgggg cgctggacca gaagggcatc gccgtcacgc
     4201 tgatccacgc aggcacgcgc aaggtcgatg cgaaccctta ccagccgctg cccgaggcgg
     4261 tccgcgagcg gatcgcgggc gagctggaag acctccgcca gctctttgca gaaaccgtcg
     4321 ccgaaggtcg tggccgccgc ctcgacacgc ttcaggcgct gggcaccgaa gccgccgttt
     4381 tccgcggcga ggcggcggtc ttcgccggtc tcgccgacga ggtggccgat ccggtcaccg
     4441 ccttccacgc tttcgccgcg gcacaccgcg gcacatccac cctcacatcc acccccaaag
     4501 gaaagggccc gatgatgacc actgcccccg aagaccatgc gcagcctgcg cctgccgcca
     4561 gccccctgcc ggaaccggcc gcgcccacgg caatcgcacc gccgcaaacc acggcggcca
     4621 caatgtcgcc cgaagcgatc cgagccgaag cggccgaggt tgcgcaggtc tgcgcccaag
     4681 ccgcgcgcct tggcatccag atcgatgccg cggatgccgt cgccaaaggc gtaaagcccg
     4741 aagccttgcg cgccaagatc ctcgccgatc ttgcggcccg cagcgatgcc gcgggcatca
     4801 tcgccaccgc cccggcacct ggggccaagg aaagccccat cgtggctgcc gcgaagaaat
     4861 cggccgccgc ctcgcgctga cagcctcgcc cggatcgggc gcacccatcc cccaacatcc
     4921 tggagactga accatgcccg tcctgacgga accgcccagc atgggcgacg tcctcaaata
     4981 tgaggtcaac ccgaactaca cccgcgaggt ggtgacgctc ctcgcgggcc tgccctatcc
     5041 cgtaggctcg gtgctcggga aaatcacggc cagcggcaaa tacaccctgt cgcccgcgac
     5101 cggggccgac ggatcgcagg tcgccactgc cgtcctgctc tatgccgtcg atgccacgct
     5161 cgccgatgcc accggcatcg tgcttgtccg cggcccctcg atcgtgtcgc gcgcggccct
     5221 cgcctacggc gccaccgtcg atgacggcac caagatcgcc gtgaaactca cccagctggc
     5281 caccgtcggc atcatcgccc gcgacggcgt ctgacgcagt ccacccggcc gcgcacttcc
     5341 cctcattccc ccggagcatc ccatgaccct cgtccgcaat cccttcgacg ctggcggtta
     5401 ctcgctggcc gagatgacgc aggccatcaa catcctgccc aa
//
LOCUS       DTVW01000954            1005 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2185285, whole
            genome shotgun sequence.
ACCESSION   DTVW01000954 DTVW01000000
VERSION     DTVW01000954.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1005)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1005)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1005
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2185285"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..563
                     /locus_tag="EYO87_12430"
     CDS             <1..563
                     /locus_tag="EYO87_12430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008942655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HIC66777.1"
                     /translation="QPGTRLTELAASAGLDKVRRRIGMVFQSFNLYPHLDARRNITLA
                     LRKALKQPRDEADARAAAALARVGLTEKEGSYPAQLSGGQQQRVAIARAIALEPAVML
                     FDEPTSALDPELVGDVLGVMRELKEDGMTMLVVSHEMGFAREAADRVVFMADGRIVEQ
                     GPPEAIFTDPQHESTRAFLSRYSSAP"
     gene            560..>1005
                     /locus_tag="EYO87_12435"
     CDS             560..>1005
                     /locus_tag="EYO87_12435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009814080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HIC66778.1"
                     /translation="MSNLDRFIETFLNGAVLAKYTPAILSGVWVTVELSVLIVIAGTV
                     LGVALACIRAYRIRPVSFVIVIYADIFRALPPLVLILLAYFGLPNIGLSLSSSAVLFV
                     ILGLTLGAFAEEIVWAGITATDKGQWEAARSTGLGFGQSLIHVVLP"
BASE COUNT          155 a          337 c          326 g          187 t
ORIGIN      
        1 aacagcctgg cacccggctg accgaactgg cagccagcgc ggggctcgac aaggttcgcc
       61 gccgaatcgg catggtgttc cagagcttca acctctatcc gcatctcgac gcgcggcgga
      121 acatcacgct ggccttgcgc aaggccctga agcagccccg cgacgaggcc gatgcccggg
      181 ccgccgccgc actggcccgc gtcggtctga ccgagaagga gggcagttat cccgcgcaat
      241 tgtccggcgg ccagcagcag cgcgtcgcca ttgcccgggc catcgcgctg gagccggcgg
      301 tgatgctgtt cgacgagccc acctcggcgc tggatccgga actggtgggc gatgtcctgg
      361 gcgtcatgcg cgagctgaaa gaggatggca tgacgatgct ggtcgtcagt cacgagatgg
      421 gctttgcccg cgaagcggcc gaccgcgtgg tgttcatggc cgatgggcgg atcgtcgaac
      481 agggcccgcc agaggcgatt ttcaccgacc cgcagcacga aagcacccgc gctttcctgt
      541 cccgctacag cagcgcccca tgagcaacct ggaccgtttc atcgaaacct tcctgaacgg
      601 ggcggttctg gcgaaataca cgccggcgat cctgagcggc gtctgggtga cggtcgaatt
      661 gtcggtgctg atcgtgatcg cggggacggt tctcggggtc gcgctggcct gcatccgcgc
      721 ctaccggatc cggccggttt ccttcgtgat cgtcatctat gccgacatct tccgcgccct
      781 gccgccgctg gttctgatcc tgctggccta tttcgggctg cccaatatcg gattgtcact
      841 gtcgagttcc gccgtccttt tcgtcattct gggcctgacc ctcggcgcct tcgccgaaga
      901 gatcgtctgg gccggcatca ccgccaccga caagggccaa tgggaggccg cgcgctcgac
      961 cgggctcggc tttggccagt ccctgatcca tgtggttctg ccgca
//
LOCUS       DTVW01000955            1757 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2185842, whole
            genome shotgun sequence.
ACCESSION   DTVW01000955 DTVW01000000
VERSION     DTVW01000955.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1757)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1757)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1757
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2185842"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..370)
                     /locus_tag="EYO87_12440"
     CDS             complement(<1..370)
                     /locus_tag="EYO87_12440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009570043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divalent metal cation transporter"
                     /protein_id="HIC66779.1"
                     /translation="MQKLTYRTRRGMTDVLTGHRKDWRGRLLFAGPAVIASVAYMDPG
                     NYATNIQAGAGYGYQLLWVVLLANLIAMLFQAMSARLGIVTGKNLAELSRDNFRKPVV
                     WVMWVVSEIAAMATDLAEFLG"
     gene            527..1033
                     /gene="mntR"
                     /locus_tag="EYO87_12445"
     CDS             527..1033
                     /gene="mntR"
                     /locus_tag="EYO87_12445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009175563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="manganese-binding transcriptional regulator
                     MntR"
                     /protein_id="HIC66780.1"
                     /translation="MTDRTTPAKKQADRFARAREKQSRALLEDYAELIGDLIAELGEA
                     RVADIAERMGVAQPTATKAISRLKREGLATARPYRGVFLTDDGADLADRVRARHRTVA
                     ELLIAVGVPEDVAEIDAEGIEHHVSRRTLSAFEAFLKAQGSTSDQARAEDPIGRDPAG
                     HGPVRDPR"
     gene            1099..1335
                     /locus_tag="EYO87_12450"
     CDS             1099..1335
                     /locus_tag="EYO87_12450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011048068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1289 domain-containing protein"
                     /protein_id="HIC66781.1"
                     /translation="MTDAPPIWTRTEPQSPCINICVIHPHEGICVGCYRTLDEIAGWA
                     SMPAETRRAVIAELPARKPLLKRRRGGRNGRRDG"
BASE COUNT          325 a          585 c          571 g          276 t
ORIGIN      
        1 cgcccaggaa ttccgccagg tcggtggcca tggcggcgat ttcgctgacc acccacatga
       61 cccataccac gggctttcga aagttgtcgc gggacagttc cgccaggttc ttgccggtga
      121 caatccccag tcgggccgac atcgcctgaa acagcatggc gatcaggttc gccagcagca
      181 cgacccatag caactgatag ccatagcccg cgcccgcctg gatgttcgtc gcgtaattgc
      241 ccggatccat gtaggcgacc gaggcgatca ccgccggccc cgcgaacaga agacggccgc
      301 gccaatcctt gcggtggccg gtcaggacat ctgtcattcc acgtcgggtt cggtaggtca
      361 gtttttgcat ggactaacaa tgattgcgtg atcaatggaa tatagccatt gctatgcccg
      421 gcgcaagggg gtgccgtccg gctgccgcga tcacgccgat tatcggttgg taaaaccgaa
      481 tagctttggc tataaatcct cttcacgctt tcgaaagagc ctgcccatga ccgacagaac
      541 gacgccggca aaaaagcagg ccgaccgctt tgcgagggcg cgggaaaagc agtcgcgcgc
      601 cctgctggaa gattacgccg aactgatcgg ggatctgatc gcggaactgg gcgaagcgcg
      661 ggtggccgat attgccgaac ggatgggggt cgcccagccg accgcaacaa aggcgatttc
      721 gcggctgaag cgcgagggtc tggcgacggc gcgcccctat cgcggggttt ttctcaccga
      781 cgacggggcc gatcttgccg atcgcgtccg cgcccgtcac cgcacggtgg ccgaactgct
      841 catcgccgtc ggcgttcccg aagatgtcgc cgagatcgac gcggaaggga tcgagcacca
      901 tgtctcgcgc cggaccctgt cggccttcga ggcgttcctg aaagcacagg gatcgacctc
      961 ggaccaggcg cgtgccgaag acccgatcgg gcgcgacccg gccgggcatg gcccggtccg
     1021 tgacccgagg tgacattgcg tcacgaaagc gtcgcttccc ggcttgcccg gctgcggacc
     1081 cgcgcctagc gtgccgccat gaccgacgcc ccgcccatat ggacccgcac cgaaccgcaa
     1141 agtccgtgca tcaacatctg cgtgatacac ccgcacgagg gtatctgcgt gggctgctac
     1201 cgcacgctgg acgagatcgc cggctgggcc tcgatgcccg ccgagacgcg gcgcgcggtc
     1261 atcgccgaac tgccggcccg caaaccgctg ctgaaaagac gccgtggcgg ccggaatggc
     1321 cggcgcgacg ggtagcggct cggtcgtccc ggaacgacca gaacagcgcc ttgcccgata
     1381 tgtcccttgc cccgccattc cgagcccagc cgggccgggc gcggcctggc acagcgcagg
     1441 aagcggggcc gaaagaattc gcatgggaaa tccggcctga tggatctccg gatgactgac
     1501 gccgcaccgc aaggatcgcg cggcgatctg gcgcctcagc cgcgcctgcc gcgaatgctg
     1561 cggtggatgc gaatgcgaac ctcgtcgggt tcggccgcga ccgcctgcat cagcgcccgc
     1621 atgtcgccgc gggcggtgtt cagctggtcg atcagcgaca tgaccatgcg caacccgtcc
     1681 tcgggcaggt tgtggcaatc ggccagatcg cacagcaatt gcaggcgcgc caggtcggcc
     1741 tcgcggaaac cggggcc
//
LOCUS       DTVW01000956            2903 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2186146, whole
            genome shotgun sequence.
ACCESSION   DTVW01000956 DTVW01000000
VERSION     DTVW01000956.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2903)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2903)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2903
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2186146"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1023)
                     /locus_tag="EYO87_12455"
     CDS             complement(<1..1023)
                     /locus_tag="EYO87_12455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009503111.1"
                     /note="catalyzes the formation of 3-methylbut-2-enoyl CoA
                     from 3-methylbutanoyl CoA; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isovaleryl-CoA dehydrogenase"
                     /protein_id="HIC66782.1"
                     /translation="MNKQLRNDTALPSHFMTDEQQALADQAGKFFMSEFHHLNAEMDD
                     TDDLPPSVFPKLGEMGYLGLNVPPEFGGAGLDFTSACIITEELSRASAAIGLTHVAHD
                     NLCVNNIYRNANDDLRRKYLPGLCNGTLIGALGLTEPGAGSDALGSMRTTAKQDGDDY
                     ILNGAKIYITNGPIADLVLVYAKTSPEKGAKGISAFIVETDTPGFKVAQKLNKMGFRG
                     SPTGELVFEDCRVPARNMVGKLDGGVAVTMSGLDLERAIVCFNALGIAQRALDISIDY
                     AKTRQQFGKPIASFQMVQAMLADMYTQIEAARSLSLRTAAMCEGLEEGEGGRGLVVVG
                     AAAHAKS"
     gene            complement(1037..2251)
                     /locus_tag="EYO87_12460"
     CDS             complement(1037..2251)
                     /locus_tag="EYO87_12460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007574730.1"
                     /note="catalyzes the formation of 3-methylbut-2-enoyl CoA
                     from 3-methylbutanoyl CoA; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isovaleryl-CoA dehydrogenase"
                     /protein_id="HIC66783.1"
                     /translation="MTAQSEAISADLEAIRANYSLTDEQRQIVDHVDRVSREVLHPLQ
                     ARMDEEEWWPDDLFKQMGELGLLGITAPEELGGSGQNEFTQALVSEVISKWNPAVGLS
                     HGAHDNLCLNNLLRNGSEEQVKKYVPGLCSGDLVGALGLTEPGAGSDALGSMATTARR
                     DGDDYIINGSKIYITNGPIADVILLYAKTDKSKGAKGISAFIIETDNPGFKVAQKLDK
                     MGFRGSPTGELVFEDCRVPASAMVGQENTGVSVVMSGLDLERAMVASVCVGMAERALE
                     LGLEYAKIREQFGKPIASFQMMQSKLAEIYTEVETARAFGYRALAACTGLPKGAGGRG
                     EIHKLTAAACLYAGEAFNKAVTEACHIHGGSGYMQDTEINRLYRANKLLEIGAGTSEV
                     RKIIIAEELLRA"
     gene            2385..>2903
                     /locus_tag="EYO87_12465"
     CDS             2385..>2903
                     /locus_tag="EYO87_12465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009503113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HIC66784.1"
                     /translation="MTESVVQSQVLGKEVRITIRRPDNRNALNREVADGIMAAICAAE
                     RDSDCRVIVLTGEGERAFCAGGDIKAGADGGPFVQDPADPDHFAGRLFETIQACRKPT
                     IARINGIAMGAGAGIICACDLAVMVDHARIGTPEVKVGLFPMTIVPPMMRVLPRRRLM
                     EMFITGVPLTAEE"
BASE COUNT          565 a          861 c          860 g          617 t
ORIGIN      
        1 ggatttggcg tgggccgccg ccccgacgac tacaaggccg cgcccgcctt cgccctcttc
       61 gaggccctca cacatggctg cggtgcgcaa ggacaggctg cgcgcggcct cgatctgcgt
      121 atacatgtcg gccagcatcg cctgaaccat ctgaaaactg gcgatcggtt tgccgaattg
      181 ctggcgtgtc ttggcataat cgatggaaat atccagcgcc cgctgcgcaa tgcccaaggc
      241 gttgaaacag acgatggcac gttccagatc aagtccggac atggtaacgg caaccccgcc
      301 atccagcttg ccgaccatgt ttctggccgg aacacggcaa tcttcgaata ccagttcgcc
      361 cgtcggcgag ccgcggaatc ccatcttgtt gagcttctgt gccaccttga aaccgggcgt
      421 gtcggtttcc acgataaagg cggaaatgcc cttggcgccc ttttccggcg aagtcttcgc
      481 atagacaagg accagatcgg caatcggccc attggtgatg tagatcttgg cgccgttcag
      541 gatgtagtcg tcaccatctt gtttggccgt ggtccgcatc gagccaagcg catcagaccc
      601 cgcgccgggt tcggtcagac ccagggcgcc gatcagcgtg ccattgcaaa gccccggcag
      661 atacttgcgg cgcagatcgt cattggcgtt gcggtagata ttgttgacgc acaagttgtc
      721 atgggccaca tgggtcagcc cgatggccgc ggaggcgcgc gacagctctt cggtgatgat
      781 gcaggccgag gtgaaatcca gccccgcgcc gccgaattcc ggcggcacgt tcaggcccag
      841 atagcccatt tcgcccagct ttggaaaaac cgaagggggt aaatcgtcgg tgtcgtccat
      901 ttccgcgttc agatggtgga actcggacat gaagaactta ccagcctgat cggccagcgc
      961 ctgctgttcg tccgtcatga aatggctcgg cagagcggta tcgttgcgca gttgcttgtt
     1021 catggtctcg tctccctcag gcgcgcaaaa gttcttcggc aatgatgatc ttgcggactt
     1081 cgcttgttcc agcgccgatc tccaacagct tgttggcgcg gtagagccgg ttgatttcgg
     1141 tgtcctgcat gtagccggag ccaccatgta tatggcaggc ttcggtgacc gccttgttga
     1201 atgcctcgcc tgcgtaaaga caggccgccg cggtcagctt gtggatttcg ccacggcccc
     1261 cggcgccttt cggcaggccc gtacaggcgg ccagcgcccg atacccgaag gcgcgtgccg
     1321 tttcgacctc ggtgtagatc tcggccagtt tcgactgcat catctggaaa cttgcaattg
     1381 gcttgccgaa ctgttcgcga atcttggcgt attccagccc cagttccagc gcgcgttcgg
     1441 ccatgccgac acagaccgat gcgaccatgg cgcgttccag atccagtccg ctcattacca
     1501 ccgaaacgcc ggtgttttcc tgtccaacca tggcggatgc gggtacgcgg caatcctcaa
     1561 acaccagttc tccggttggc gagccgcgga agcccatctt gtcaagcttt tgcgccacct
     1621 tgaaaccagg attgtccgtc tcgatgatga aagcagaaat gcccttggcg cccttcgatt
     1681 tgtcggtctt ggcataaagc aggatcacat cggcaatcgg cccgttggtg atgtagatct
     1741 tcgagccgtt gatgatatag tcgtcgccgt cgcggcgcgc ggtggtcgcc atggacccaa
     1801 gcgcatctga ccccgcgccc ggctctgtca aacccagagc accaaccaag tcgcccgagc
     1861 ataggccggg cacatatttc ttgacctgct cctccgagcc gttgcgtaga aggttgttca
     1921 ggcacaggtt gtcatgtgcg ccatgtgaca gtcccacggc agggttccat tttgatatca
     1981 cctcagagac cagcgcctgg gtaaattcat tctgtccgga gccacccagc tcctcgggcg
     2041 cggtgatgcc cagaaggccc agttcgccca tctgcttgaa cagatcgtcg ggccaccact
     2101 cctcttcgtc catgcgcgcc tgtagcggat gcagcacctc gcgcgatacc cgatccacgt
     2161 gatcgacgat ctggcgttgc tcatcagtca aagaatagtt cgccctgatg gcttccagat
     2221 cagccgagat ggcctcactt tgagcggtca tatcgtcctc ccgaaaaatg ttgtttgcgt
     2281 tgttgaccaa aatcaaacac atgttagaaa atagatcaag ccaagctttt gacgacctga
     2341 cgtaagaaag cgcggcgtcc tgaatgcagg ggggaacttc ggaaatgact gagagcgttg
     2401 ttcaatcgca ggtgctcggc aaagaagtgc gtatcacgat tcgacgtcct gataatcgaa
     2461 atgccctcaa ccgtgaggtc gcagacggga tcatggccgc catatgtgct gccgagaggg
     2521 acagcgattg tcgcgtgatc gttctgaccg gcgagggcga gcgcgccttc tgtgccgggg
     2581 gcgacatcaa ggcgggggcg gatggcggcc cgtttgttca ggatccggcg gacccggatc
     2641 attttgccgg aaggttgttc gagacgatac aggcgtgccg aaagccaacg atcgcgcgca
     2701 tcaatggcat cgcgatgggg gcgggggcgg gcatcatctg tgcctgcgat ctggctgtga
     2761 tggtggatca tgcccgcatc ggaacgccgg aagtgaaggt aggtctgttt cccatgacga
     2821 tcgtgccacc catgatgcgc gtgctgcccc ggcggaggct gatggagatg ttcatcaccg
     2881 gcgttcctct gacggccgag gaa
//
LOCUS       DTVW01000957            2512 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2187942, whole
            genome shotgun sequence.
ACCESSION   DTVW01000957 DTVW01000000
VERSION     DTVW01000957.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2512)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2512)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2512
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2187942"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..321)
                     /locus_tag="EYO87_12470"
     CDS             complement(<1..321)
                     /locus_tag="EYO87_12470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013654894.1"
                     /note="with UgpABC is involved in uptake of
                     glycerol-3-phosphate; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate transporter"
                     /protein_id="HIC66785.1"
                     /translation="MIENRPGLNILAHLVLILGVVIVALPVWVAFVASTRSATDFMSG
                     TVPMWPGPHLVENYARMLDSGVSTSGTPPVARMMFNSLVMALSIAIGKIAISILSAFA
                     IVYFR"
     gene            complement(321..1199)
                     /gene="ugpA"
                     /locus_tag="EYO87_12475"
     CDS             complement(321..1199)
                     /gene="ugpA"
                     /locus_tag="EYO87_12475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007679257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sn-glycerol-3-phosphate ABC transporter permease
                     UgpA"
                     /protein_id="HIC66786.1"
                     /translation="MKRTIFSNQLLPWLLLAPQLAITFIFFLWPAGQAIRQSFLREDA
                     FGINTSFVGLANFRALLDSPEYLESVKVTAVFAVSVTVVSMGVALLLAVAVDRMLKSA
                     RVYTTLLVWPYAVAPAVAGILWWFIFNPTIGIMPYVLDVIGYDWNHVSSKTDAMILVV
                     IASAWKQISYNFLFFVAGLQAIPASMREAAAIDGAGPVRRFFDITFPLLSPTTFFLLV
                     INIVYAMFETFGVIDATTEGGPARATNIMVYKVYFDGFVGQNIGSSAAQSVVLMLLVI
                     TLTIIQFRWVEKKVEY"
     gene            complement(1272..2495)
                     /gene="ugpB"
                     /locus_tag="EYO87_12480"
     CDS             complement(1272..2495)
                     /gene="ugpB"
                     /locus_tag="EYO87_12480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007635060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sn-glycerol-3-phosphate ABC transporter
                     substrate-binding protein UgpB"
                     /protein_id="HIC66787.1"
                     /translation="MGGELGSKLEEIVQGFNDSQNEYKVVPSYKGTYPETMTAAIAAF
                     RAKQQPTIVQVFEVGTGTMMAAQGAIVPVYQLMQDNDVQFDPNAFLPAVVGYYTDTDG
                     NMLSMPFNSSTPILYYNKDVFEKAGLDPEQPPKTWGEMEEFSKKIIDSGAASCGFTTG
                     WVSWIQTENFSAWHNQPVGTEQNGFGGLDARLSLNGPVQVKHWENLKKWADEGIFKYG
                     GPVGGDNAPPMFYSQECAMIMNSSASRAGVLANAQDFQVGFGMLPYYDDVEGAPQNTI
                     IGGATLWVLSGRPEEEYKGAARFFEYLSSPDVQADWASFSGYLPITQAAADQMSGFFA
                     DNPGADTGLKEITLNPPTENSKGLRFGNYVQIRGIIDEEFEQLLAGSKDAQGALDSVV
                     ERGNKLLEEFQAQNQ"
BASE COUNT          493 a          756 c          797 g          466 t
ORIGIN      
        1 gcggaagtag acgatggcga aggctgacag gatcgagatg gcgatcttgc cgatggcgat
       61 cgacagcgcc atgacaaggc tgttgaacat catccgcgcg accggcggtg tgccgctggt
      121 cgagacgccg ctgtccagca tccgggcata attctcgacc agatgggggc cgggccacat
      181 cggcacggtg cccgacatga aatcggtcgc ggaccgggtc gaggcgacga aggccaccca
      241 cacgggcagg gcgacgatca cgacgccgag gatcagcacc agatgggcga ggatgttcag
      301 gccggggcga ttttcgatca tcagtattcg accttctttt cgacccagcg gaactggatg
      361 atcgtcagcg tgatcaccag cagcatcaag accaccgatt gcgccgccga actgccgata
      421 ttctgtccca cgaaaccgtc gaaatacacc ttgtagacca tgatgttggt ggcccgcgcg
      481 ggtccgccct cggtcgtggc gtcgatgacg ccgaaggtct cgaacatggc atagacgata
      541 ttgatcacga gcagaaagaa ggtcgtgggc gacagcagcg gaaaggtgat gtcgaagaaa
      601 cgcctgacgg ggccggcgcc gtcgatggcg gcggcctcgc gcatggaggc cggaatggcc
      661 tgcaggccgg cgacgaagaa caggaagttg tagctgatct gcttccacgc gctggcgatg
      721 acgacaagga tcatcgcatc ggtcttggaa ctgacatggt tccagtcata gccgatgaca
      781 tccagcacat agggcatgat gccgatggtc gggttgaaga tgaaccacca caggatgccg
      841 gccacggccg gcgcgaccgc atagggccag accagcaggg ttgtgtagac gcgcgccgat
      901 ttcagcatcc ggtccacggc caccgccagc agcagcgcca cgcccatcga cacgaccgtc
      961 acggagacgg cgaaaaccgc cgtgaccttc accgattcca ggtattccgg actgtccagc
     1021 agcgcccgga aattcgccag ccccacgaag cttgtattga tgccaaaggc gtcttcgcgc
     1081 aggaaacttt gcctgatcgc ctggccggcg ggccagagga agaagatgaa ggtaatggcc
     1141 agctgcgggg ccagcagcag ccatggcagc aactgattgc tgaaaattgt gcgcttcatc
     1201 gcatctccgg gtggtgcggg ccggtcggca agggatgggg accgcgaccg atcgcggccc
     1261 ccgatccgtt cctactggtt ttgcgcctgg aattcctcga gcagcttgtt gccccgctcg
     1321 accaccgaat ccagcgcgcc ctgggcgtct ttcgaaccgg ccagaagctg ttcgaattcc
     1381 tcgtcgatga tgccgcggat ctggacgtaa ttgccaaagc gcagaccctt ggaattctcg
     1441 gtcggcgggt tcagcgtgat ctctttcagg ccggtatcgg cgccgggatt gtcggcgaag
     1501 aagcccgaca tctggtccgc cgcggcctgc gtgatcggca gataacccga gaacgaggcc
     1561 cagtcggcct ggacatcggg cgaagagaga tattcgaaga acctggcggc gcccttgtat
     1621 tcctcctccg ggcgtcccga cagaacccac agggtcgcgc cgccgatgat ggtgttttgc
     1681 ggcgcgccct cgacatcgtc gtaatagggc agcatcccga agccgacctg gaaatcctgg
     1741 gcattggcca ggacaccggc acggctggcc gaactgttca tgatcatcgc gcattcctgc
     1801 gaatagaaca tgggcggtgc gttgtcgccg ccgaccgggc cgccatattt gaagatgcct
     1861 tcatcggccc atttcttgag gttttcccaa tgcttgacct gaaccgggcc gttcagcgac
     1921 agccgcgcat ccagtccgcc gaagccgttc tgttcggtgc cgaccggctg gttgtgccag
     1981 gcgctgaaat tctcggtctg gatccagctg acccagccgg tggtgaagcc gcaggacgcg
     2041 gcgcccgaat cgatgatctt cttcgagaat tcttccatct cgccccaggt cttcgggggc
     2101 tgttccgggt ccaggccggc cttctcgaac acatccttgt tgtaatacag gatcggcgtc
     2161 gagctgttga acggcatcga cagcatgttg ccgtcagtgt ccgtataata gcccacgacc
     2221 gccggcagga aggcgttcgg gtcgaactgg acatcgttgt cctgcatcag ttgatagacc
     2281 gggacgatgg cgccctgggc ggccatcatg gttccggtgc cgacctcgaa gacctgcacg
     2341 atggtcggct gctgcttggc gcggaacgcc gcgatggcgg cggtcatcgt ctcgggatag
     2401 gtgcccttgt aggacgggac gaccttgtat tcgttctggc tgtcattgaa gccctggacg
     2461 atttcttcca gcttggagcc cagctcgccg cccatggcgt gccaccactg ga
//
LOCUS       DTVW01000958            1100 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2188706, whole
            genome shotgun sequence.
ACCESSION   DTVW01000958 DTVW01000000
VERSION     DTVW01000958.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1100)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1100)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1100
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2188706"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            26..712
                     /gene="rnc"
                     /locus_tag="EYO87_12485"
     CDS             26..712
                     /gene="rnc"
                     /locus_tag="EYO87_12485"
                     /EC_number="3.1.26.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease III"
                     /protein_id="HIC66788.1"
                     /translation="MRPGADIVGFMTRLGHDFARPELLVRALTHGSIATATRPDNQRL
                     EFLGDRVLGLVMAEALFQADPAATEGQLAPRYNALVRGETCAAIARRIGLGEVLKLGR
                     SEMMSGGRRKEALLADAMEAVIAAIYLDAGFDAARQVVLILWRDRLDTLEDDPRDAKT
                     ALQEWAQANGMPPPVYEQTARSGPDHAPVFHVTARLADGREAQAQGVGTKRSVEQAAA
                     QALLARLEDR"
     gene            712..>1100
                     /locus_tag="EYO87_12490"
     CDS             712..>1100
                     /locus_tag="EYO87_12490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_351725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HIC66789.1"
                     /translation="MTDPITRAGFVALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTR
                     ARIRGIAVAGAAQIVFVDTPGIFRPRRRLDRSMIAAAWGGAADADIILLLVEAHRGLT
                     EGTQAIIDNLKALEVRTPVAMIINKIDR"
BASE COUNT          173 a          372 c          391 g          164 t
ORIGIN      
        1 cggaccggtt cttcaaggcg gtcgattgag accgggcgcc gatatcgtgg gtttcatgac
       61 ccggctgggc catgatttcg cgcgtcccga attgctggtg cgcgcgctga cccatggctc
      121 gatcgccacg gcgacgcggc ccgacaacca gcggctggaa tttctgggcg accgcgtgct
      181 gggcctggtg atggccgagg cgctgtttca ggccgatccg gccgccaccg agggccagct
      241 cgcgccgcgc tacaacgcgc tggtgcgggg cgagacctgc gccgccatcg cgcgtcggat
      301 cgggctgggc gaggtgctga agctgggccg gtccgagatg atgtcgggcg gccgccgcaa
      361 ggaggccctg ctggccgacg cgatggaggc ggtgatcgcc gcgatctatc tggatgcggg
      421 tttcgatgcc gcccggcagg tggtcctgat cctgtggcgg gaccggctgg acacgctgga
      481 agacgatccc cgcgacgcca agaccgcgct gcaggaatgg gcgcaggcca acgggatgcc
      541 gccgcccgtc tatgaacaga ccgcgcgcag cggtcccgat cacgcgccgg tctttcacgt
      601 gaccgcgcgg ctggccgatg gtcgcgaggc acaggcgcag ggtgtgggaa ccaaacgcag
      661 cgtggaacag gccgcggccc aggccctgct tgccaggctg gaggaccgct gatgacagat
      721 cccatcacgc gcgcgggttt cgtcgccctg atcggcgagc ccaatgccgg caagtccacg
      781 ctgctgaacc gcatggtcgg cgccaaggtc agcatcgtga cccacaaggt ccagaccacc
      841 cgcgcgcgca tccgcggcat cgccgtcgcc ggcgccgccc agatcgtctt cgtggacacg
      901 ccgggcatct tccgtccgcg ccgcaggctg gaccgttcca tgatcgccgc cgcctggggc
      961 ggggccgccg atgccgacat catcctgttg ctggtcgagg cccatcgcgg cctgaccgag
     1021 ggcacgcagg cgatcatcga caacctgaag gcgcttgagg tcaggacgcc ggtcgcaatg
     1081 atcatcaaca agatcgaccg
//
LOCUS       DTVW01000959            1117 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2189883, whole
            genome shotgun sequence.
ACCESSION   DTVW01000959 DTVW01000000
VERSION     DTVW01000959.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1117)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1117)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1117
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2189883"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(177..752)
                     /locus_tag="EYO87_12495"
     CDS             complement(177..752)
                     /locus_tag="EYO87_12495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007426442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66790.1"
                     /translation="MDPDRIAALFTRQDGSFLCARWGRPVAPVAFGLAEESLDIFRAA
                     IRAGFAHAGHPVTETDPEMGSNLMLFFMRDWQELQGVPDLDLLTGQDGLPGRLAGLKA
                     DQYRIFRFDADGGIRACLHFVRMSGALGDAHPAQLAEALTMRSALSFARDVAPSTDLA
                     ALIRAAYDPILPVAAQDPSHALRLSARIART"
     gene            complement(860..>1117)
                     /locus_tag="EYO87_12500"
     CDS             complement(860..>1117)
                     /locus_tag="EYO87_12500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007119144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinyl-CoA--3-ketoacid-CoA transferase"
                     /protein_id="HIC66791.1"
                     /translation="GMGGAMDLVAGVKRVIVVMDHTNKAGESKLLKSCTLPLTGKAVV
                     DRIITNLGVLDVVEGGLKIVETADGVTEDEIRAATEATIVG"
BASE COUNT          194 a          397 c          351 g          175 t
ORIGIN      
        1 atcctcgtaa tagacgcgca ggatcatgga atggctcatg gcagctatcc taggacgggg
       61 tcggaatacc cgcaatcgcc cgttcggcgg gcgaaggggg cggcacggac aaactccgtg
      121 ccggtcgctg tcgctggacg gatgcgcgcg ttccgcgcgc tgtcgcgcgg gccgcatcag
      181 gtccgcgcga tccttgccga cagacgcagg gcatggctgg gatcctgcgc tgccaccggc
      241 aggatcgggt cataggccgc ccggatcagc gccgcgagat ccgtcgaggg cgcaacgtcg
      301 cgcgcgaagc tcagcgcgct gcgcatggtc agcgcctcgg caagctgcgc cggatgcgca
      361 tcgcccaacg cgcccgacat ccgcacgaaa tgcagacagg cccggatgcc gccatcggca
      421 tcaaagcgaa aaatccggta ttgatcggcc tttagcccgg ccagccgccc gggcaaccca
      481 tcctggcccg tcagaagatc cagatccggc acgccctgca attcctgcca gtcgcgcatg
      541 aagaacagca tcaggttgct gcccatctcg gggtcggtct cggtcacggg atgtccggca
      601 tgggcaaagc cggcccggat tgcggcccga aagatgtcga ggctttcctc ggccagcccg
      661 aacgcgaccg gcgcgaccgg tcgcccccat cgcgcgcaca gaaacgatcc atcctggcgc
      721 gtgaacagcg ccgcaatccg gtcaggatcc atcgaaacct ccgccggtcc ctttgccttg
      781 gcccaaatat cctgggggaa gtcgccggaa cggcgacggg gggcaacgcc ccctgcctcc
      841 gccgccggtc tatcccggat cagccgacga tcgttgcctc ggtcgcggcg cggatctcgt
      901 cctcggtcac gccatcggcg gtctccacga tcttcaggcc gccctcgacc acatccagca
      961 cgcccaggtt ggtaatgatc cggtccacca cggccttgcc ggtcaggggc agcgtgcagg
     1021 atttcagcag ctttgattcg ccggccttgt tggtgtggtc catgaccacg atcacgcgct
     1081 tgacgcccgc gaccagatcc atcgcgccgc ccatgcc
//
LOCUS       DTVW01000960            4076 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2190083, whole
            genome shotgun sequence.
ACCESSION   DTVW01000960 DTVW01000000
VERSION     DTVW01000960.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 4076)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4076)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4076
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2190083"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..273
                     /locus_tag="EYO87_12505"
     CDS             <1..273
                     /locus_tag="EYO87_12505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005648643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HIC66792.1"
                     /translation="AGADGIICSPREAAAIRALPGSGLIVTPGVRPAGGDPGDQRRVE
                     TPATAIAAGADHIVVGRPVWKAANPRAAAEAILAEISSPQAQRPAQ"
     gene            344..1072
                     /locus_tag="EYO87_12510"
     CDS             344..1072
                     /locus_tag="EYO87_12510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF998 domain-containing protein"
                     /protein_id="HIC66793.1"
                     /translation="MGDKQGIIQKAENDLVLSFLAVRRAIGLLGFFLPVVLILWGLAA
                     PAGLFRSISAAYYSPMREIFVGTLIAQAVFLWSYEGYRPRGSEIVSDKATARVAAVSA
                     ALIALAPTSPQGLGIAPDSLPDCTLLQCRLGVGLTGGIHLVAAALYFAALAVTCLVLF
                     RRGAADSMEKRASNRIYLICGWLIVIGIGLIGVLFATGWDARLAALRPVFWLETLATF
                     AFATSWLVKGDALRPLVRGVAALR"
     gene            complement(1073..1969)
                     /locus_tag="EYO87_12515"
     CDS             complement(1073..1969)
                     /locus_tag="EYO87_12515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006022085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphorylase"
                     /protein_id="HIC66794.1"
                     /translation="MTLSRLSLAALLALPLPALAGTGRIAVMSAFPPEWVSLQADLEG
                     AETQIVNGTEFVTGTLSGQPVVLFLSGVSMVNAAMTTQLALDRFQIDAIVFSGIAGGV
                     DPSLNIGDVVVAGQWGSYLESIMARETDGGFAIPPFLDSPFPNYGMIFTGETTVASDR
                     GQPESRFWFPVDEILLQTARGVADSTELADCNAENACLDRTPQIRVGGNGVSGSAFVD
                     NAGLREWIFETFDAQVVDMESAAVAQVAWANQVPFIAFRSLSDLAGGGEGANEMGIFM
                     SLASENSALLVKRFLAAMPATE"
     gene            2107..3075
                     /locus_tag="EYO87_12520"
     CDS             2107..3075
                     /locus_tag="EYO87_12520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010392075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HIC66795.1"
                     /translation="MLPPILQNLRIPVVAAPMFIVSGPDLVIAQCKAGIVGSFPALNA
                     REKDGQPALLDAWLTRISEELDRHNQANPDRPAAPFAVNQIVHRSNARLERDIEICHR
                     HKVPIWITSLGARPEVNAAAHDCGGIALHDVINDRFARKAIDKGADGLIAVAAGAGGH
                     AGLQSPFALVQEIRDWFDGPLLLSGAIATGRAVLSAQAMGADLAYIGSPFIATDEANA
                     PPEYKRMIVESNAMDIVTSSLFTGVSGNYLAPSIRAAGLDPDNLGSADARAMNFGDNA
                     AKAKAWSQIWGSGQGIGAVRDVLPAGQRIEMLARDHAEAKRMLCAA"
     gene            3138..3578
                     /gene="msrB"
                     /locus_tag="EYO87_12525"
     CDS             3138..3578
                     /gene="msrB"
                     /locus_tag="EYO87_12525"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017018012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (R)-S-oxide reductase MsrB"
                     /protein_id="HIC66796.1"
                     /translation="MEYRKSQDAIDRLNPEQFRVTQKNGTERAFTGEYDHHFEPGIYV
                     DVVTGEPLFASAAKYNSGCGWPAFTKPIDANVTEHRDVTFGMERVEVRSKHGDSHLGH
                     VFPDGPRESGGLRYCINSAALRFVPRDRMEAEGYGAYLDQAEEA"
     gene            3580..4056
                     /gene="msrA"
                     /locus_tag="EYO87_12530"
     CDS             3580..4056
                     /gene="msrA"
                     /locus_tag="EYO87_12530"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002822780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HIC66797.1"
                     /translation="MTERATLAGGCFWGMQDLIRRLPGVISTRTGYTGGEVPNATYRN
                     HGNHAEAIEIDFDPEIISYRRLLEFFFQIHDPTTPNRQGNDIGPSYRSAIYYADAVQK
                     REAEDTIADVEASGLWPGKVVTEIEPVGDFWQAEPEHQDYLERFPNGYPCHFPRPN"
BASE COUNT          714 a         1361 c         1327 g          674 t
ORIGIN      
        1 gccggcgccg acggcatcat ctgttccccg cgcgaggcgg cggcgatccg ggcgctgccc
       61 ggttcggggc tgatcgtgac gcccggggtg cgcccggcag gtggcgatcc gggcgaccag
      121 agacgggtcg agacgccggc caccgccatt gcggcgggcg ccgatcacat cgtcgtcggc
      181 cgaccggtct ggaaagccgc caatccccgc gccgccgccg aagccatcct tgcagagatc
      241 tcatcgccgc aggcgcaacg tccggcgcaa tgagaaaaca cgcaacacgt tgacccaagg
      301 ctaagcgcgc ggcagattcc gccctttcca ggcggaggcg atcatgggcg acaaacaggg
      361 tatcatccag aaggccgaga acgatctggt cctgtccttc ctggcggtgc gccgcgccat
      421 cggtctgctg ggcttcttcc ttccggtggt gctgatcctg tgggggctgg cggcgcccgc
      481 gggactcttt cgcagcattt cggcggccta ttattcgccc atgcgcgaga ttttcgtggg
      541 cacgctgatc gcccaggcgg tgtttctgtg gagctacgag ggctatcgcc cccgcgggtc
      601 cgagatcgtc agcgacaagg cgacggcgcg ggtggcggcc gtctcggccg cgctgatcgc
      661 gctggcgccg accagcccac agggcttggg catcgcgccc gattccctgc ccgattgcac
      721 gcttctgcaa tgccggctgg gggtcgggct gacgggcgga atccatctgg ttgcggcggc
      781 gctgtatttc gcggcgctgg cggtcacctg cctcgtgctt ttccggcgcg gcgcggcaga
      841 cagcatggaa aaacgcgcgt cgaaccgcat ctatctgatc tgcggctggc tgatcgtgat
      901 cggcatcggc ctgatcggcg ttctgttcgc cacaggctgg gatgcccggc tggcggcgct
      961 gcgcccggtc ttctggctgg aaacgctggc caccttcgcc ttcgcgacaa gctggctggt
     1021 caagggcgac gccctgcgcc cgctggtccg gggcgtcgcc gcgctgcgct gatcattcgg
     1081 tggcgggcat cgcggccagg aaccgcttga ccagcaatgc cgaattttcc gaggccagcg
     1141 acatgaagat gcccatctcg ttggcgcctt cgccgcctcc ggccagatcg gacagcgacc
     1201 ggaaggcgat gaagggcacc tgattggccc aggcgacctg cgccacggcc gccgattcca
     1261 tgtccaccac ctgcgcgtcg aaggtttcaa agatccattc gcgcaggccc gcattgtcca
     1321 caaaggccga acccgagacg ccgttcccgc cgacgcggat ctgcggcgtc ctgtccagac
     1381 aggcattctc ggcgttgcaa tcggccagtt cggtgctgtc ggcaacaccg cgcgctgtct
     1441 gcaagagaat ttcgtccacc ggaaaccaga accggctttc aggctgaccc cggtccgagg
     1501 cgaccgtggt ctcgccggta aagatcatgc cgtaattcgg aaacggcgaa tccagaaacg
     1561 gcggaatcgc aaagcctcca tccgtctcgc gcgccatgat gctttccaga taggatcccc
     1621 actggccggc caccaccaca tcgccgatat tcagcgacgg atcgaccccg cccgcgattc
     1681 cggaaaagac gatggcgtcg atctggaacc ggtccagcgc cagttgcgtc gtcatcgccg
     1741 cattgaccat cgacacgccc gacaggaaca gcacgaccgg ctggcccgac agcgtgccgg
     1801 tgacgaattc ggtgccgttg acgatctgtg tctcggcgcc ttccagatcg gcctggagac
     1861 tgacccactc cggcggaaat gcggacatca cggcgatgcg gccggtcccg gccagggcgg
     1921 gcagaggcag ggcaagaagt gccgcgaggc tcaggcggga cagcgtcatg gattctcctt
     1981 cgcgatgtct ggcccccgtc atagaccgat ccggcggctc gggccagcgc ggcgcgactg
     2041 tcgcggcgtc acggttgccg cctgcccggg gtcgcgccat ccttgcccaa attcacggag
     2101 gaacccatgc tgccaccgat cctgcagaac ctgcgcattc ccgtcgtcgc agcgccgatg
     2161 ttcatcgtct cgggaccgga cctggtcatc gcgcagtgca aggccgggat cgtcggcagc
     2221 tttccggccc tgaacgcgcg agagaaggat ggccagcccg cgctgctgga cgcctggctg
     2281 acccgcatat ccgaggaact ggaccgccat aaccaggcca atcccgaccg ccccgcagcg
     2341 ccatttgcgg tgaaccagat cgtccatcgc agcaatgcgc ggctggaacg cgacatcgag
     2401 atctgccacc gccacaaggt gccgatctgg atcacctcgc tgggcgcgcg acccgaggtg
     2461 aacgccgctg cccatgattg cggcggcatc gcgctgcatg acgtgatcaa cgacagattc
     2521 gcgcgcaagg ccatcgacaa gggcgcggac gggctgatcg ccgtcgcggc gggggcgggc
     2581 ggtcatgccg ggttgcaatc gcctttcgcg ctggtgcagg aaatccgcga ctggttcgac
     2641 ggaccgctgc tgctgtcggg ggcgatcgcg accggccggg cggttctgtc ggcgcaggcg
     2701 atgggcgccg atctggccta tatcggcagc cccttcatcg ccaccgacga ggccaatgcc
     2761 ccgcccgaat acaagcggat gatcgtcgaa agcaacgcga tggacatcgt gacctcgtcg
     2821 ctgttcaccg gcgtttcggg gaattacctg gccccctcga tccgcgccgc gggacttgat
     2881 cccgacaatc tgggcagcgc cgatgcgagg gcgatgaatt tcggcgacaa tgccgccaag
     2941 gccaaggcat ggagccagat ctggggatcg ggccagggca tcggcgccgt gcgcgacgtc
     3001 ctgccggccg gccagcgcat cgagatgctg gcccgcgacc atgccgaggc aaagcgcatg
     3061 ctctgcgccg cgtgaccttt gcggaccgcc cggtccaccc catatagggg accgaacagg
     3121 attcgcggag gaccgacgtg gaatatcgca aatcgcagga tgcgatcgac cggctgaacc
     3181 cggaacagtt ccgggtgacc cagaaaaacg gcaccgaacg cgcctttacc ggcgaatatg
     3241 accatcattt cgaacccggc atctatgtcg atgtcgtcac gggcgagccg cttttcgcct
     3301 cggccgcgaa atacaattcc ggctgcggct ggcccgcttt caccaaaccc atcgacgcga
     3361 atgtcaccga acatcgcgac gtgaccttcg gcatggaacg ggtcgaggtc cggtcgaaac
     3421 acggcgacag ccatctggga catgtctttc ccgacggccc gcgcgagtcc gggggcctgc
     3481 gctattgcat caattcggcc gccctgcgct ttgtgcccag ggaccggatg gaggccgagg
     3541 gttatggcgc ctaccttgat caggcagagg aggcctgaga tgaccgagcg cgcgacactg
     3601 gcgggtggct gtttctgggg catgcaggat ctgatccggc gcctgccggg cgtgatcagc
     3661 acccgcacgg gctataccgg cggcgaggtt ccgaacgcga cctatcgcaa ccacggcaat
     3721 catgccgagg cgatcgagat cgatttcgac cccgagatca tcagctatcg ccggctgctg
     3781 gaattcttct tccagatcca cgatccgacc acgccgaacc ggcagggcaa cgatatcggc
     3841 cccagctatc gctcggcgat ctactacgcg gatgcggtcc agaagcgcga ggccgaggac
     3901 acgatcgccg atgtcgaggc ctcgggtctg tggccgggca aggtcgtgac ggaaatcgaa
     3961 ccggtcgggg atttctggca ggccgagccc gaacatcagg attatctgga acgctttccc
     4021 aacggctatc cctgccattt cccgcgcccg aactgagtgc tgccgagacg aagcgc
//
LOCUS       DTVW01000961            1335 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2191566, whole
            genome shotgun sequence.
ACCESSION   DTVW01000961 DTVW01000000
VERSION     DTVW01000961.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1335)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1335)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1335
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2191566"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..137)
                     /locus_tag="EYO87_12535"
     CDS             complement(<1..137)
                     /locus_tag="EYO87_12535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005617266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate thymidylyltransferase"
                     /protein_id="HIC66798.1"
                     /translation="MTTRKGIVLAGGSGTRLYPITMGVSKQLLPLYDKPMIYYPISVL
                     ML"
     gene            complement(134..991)
                     /gene="rfbD"
                     /locus_tag="EYO87_12540"
     CDS             complement(134..991)
                     /gene="rfbD"
                     /locus_tag="EYO87_12540"
                     /EC_number="1.1.1.133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010400419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose reductase"
                     /protein_id="HIC66799.1"
                     /translation="MKGLLVFGLNGQLARELRGLAPEAIFLGRQHADLSRPERCAKVI
                     GTIAPSVIVNAAAYTAVDRAETERDLAWKINAEAPAEMARAAKALGIPFLHVSTDYVF
                     DGSSLTAWSEDDPTRALGQYGASKLAGEQAIADTGGRWAVLRTSWVFSAHGSNFVKTM
                     LRLGAEREILSIVADQSGGPTPARDIAQALLHMASRMLTAETTRGIYHFAGTPDVSWA
                     DFAREIFSHAGLTCEVRDIATADYPTPARRPLNSRLNCRKIERDFGISRPDWRVGLQD
                     VLRQLKETA"
     gene            complement(988..>1335)
                     /locus_tag="EYO87_12545"
     CDS             complement(988..>1335)
                     /locus_tag="EYO87_12545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007257045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-glucose 4,6-dehydratase"
                     /protein_id="HIC66800.1"
                     /translation="LLVLEKGRTGRSYNIGGENEATNLELVRMICAQMDVLKPENGPH
                     GRLVTFVPDRPGHDRRYAIDPTRIRSELGWRPSVTIEEGLRRTVRWYLDNPAWWQPLL
                     GRDGVGKRLGTGR"
BASE COUNT          250 a          448 c          386 g          251 t
ORIGIN      
        1 agcatgagaa cgctgatcgg ataatagatc atcggcttgt catagagcgg cagaagctgc
       61 ttcgacacgc ccatcgtgat cggatagagc cgggtgcccg atccgcctgc cagcacaatg
      121 cccttgcgcg tggtcatgct gtctccttca actgacgcag cacatcttgc agaccaacgc
      181 gccaatccgg gcgtgaaatt ccgaaatccc gctcgatctt gcggcagttc agtctggaat
      241 tcaaagggcg ccgggcgggc gtcgggtaat ccgccgtcgc gatatcgcgc acctcgcagg
      301 tgaggccggc atgtgaaaag atctcgcgcg cgaaatccgc ccaggacacg tcgggggttc
      361 cggcaaagtg atagatgccg cgcgttgttt ctgcagtcag catccgactt gccatgtgca
      421 gcagggcttg agcaatatcc ctcgcggggg tcggtccacc cgactggtcc gcgacgatgg
      481 acagaatctc cctttccgcg ccgaggcgca gcatggtctt cacgaaattg ctgccatgcg
      541 ccgaaaagac ccatgacgtc ctcaggacgg cccatcgccc acccgtatcg gcgatggcct
      601 gttcgccggc cagcttgctg gcgccgtatt gccccagtgc tctggtcgga tcatcctcgg
      661 accacgccgt caggcttgaa ccgtcgaaga catagtcggt cgagacatgc aaaaagggaa
      721 tgcccaacgc tttcgccgct cgcgccatct cggccggcgc ttcggcattg atcttccagg
      781 caaggtcgcg ctccgtctcg gcgcggtcga cggcggtata ggcggctgcg ttcacgatga
      841 cgctgggtgc gattgtcccg atcaccttgg cgcagcgctc cggccttgac agatccgcgt
      901 gctgccggcc gaggaaaatc gcctctggag ccaggccacg caattcccgc gccagttgtc
      961 cgttcagacc gaagaccagc aaacccttca ccgaccggtc cccaaccgct tcccgacgcc
     1021 gtcccgcccc agcaagggct gccaccacgc gggattgtcc agataccacc ggacggtccg
     1081 gcgcagcccc tcctctatgg tcaccgaggg acgccatccc aattcgctgc gaatgcgtgt
     1141 gggatcgatg gcataacggc gatcatgccc cggccggtca ggcacgaagg tgacaagccg
     1201 cccatgaggc ccattttcgg gcttcaagac atccatctgc gcgcagatca tccgtaccag
     1261 ttccagattg gtcgcctcgt tttctccgcc gatattgtag ctgcgtcccg tccggccctt
     1321 ttccagcacc agcag
//
LOCUS       DTVW01000962            1217 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2192712, whole
            genome shotgun sequence.
ACCESSION   DTVW01000962 DTVW01000000
VERSION     DTVW01000962.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1217)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1217)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1217
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2192712"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1217)
                     /locus_tag="EYO87_12550"
     CDS             complement(<1..>1217)
                     /locus_tag="EYO87_12550"
                     /inference="COORDINATES: protein motif:HMM:PF13517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66801.1"
                     /translation="QISSNSSQGQGFILPPSASISSTSLNVSFSPEVGGGLWQFGTIT
                     DIEIASVDGDALPEVIVLNESASGAMVGVFEWNSSAQTMTSNWVTTCDNATDIRVGDI
                     DNDGDDDIGVFDSSEMQMCVHFANALGLSAVSNYSLPSGSIDAHLADLDGDGSAELIS
                     ASSGGDLNIRVWDSGSGVFGENQTQMVEANESVGMPAQLNGLITGEFHGVGNDSSVVV
                     FDSMGHATLWNWSGSAWIGPMNFFDGIKGGTLVHDFDSNGYADIIGTADGMVTLALFN
                     GTGWNATLVTTAAVDFSHIGDYDGNGQLEILTANAGTPDGSDTTFTGSILLRHLNGTT
                     IAATSTFVLQPWTSPKQILLADVNGDGTDEHIVAAGESQAGIFVSAWHSLSIDANNDS
                     VAEATVRGYSGDG"
BASE COUNT          321 a          339 c          279 g          278 t
ORIGIN      
        1 accatctcct gaatatcctc tgacggtggc ctcagcaacc gaatcattat tggcatcgat
       61 actcaaactg tgccacgcac tgacgaatat ccccgcttgg gattctccag cggctacgat
      121 atgttcatcg gtgccatcgc cgttcacatc tgctagcaga atctgcttcg gtgatgtcca
      181 aggctgtagc acgaatgttg aggttgctgc gatggtcgtg ccgttgagat ggcgcagcaa
      241 aatcgagccg gtgaaggttg tatcactacc gtcgggggtg ccggcatttg ccgtcaaaat
      301 ctccaattgg ccattgccat cgtaatcgcc tatatgcgaa aaatcaactg cggcagtcgt
      361 caccaatgtc gcattccaac cggtaccatt gaacaatgcc aaggtgacca ttccatcggc
      421 cgtgccgatg atatctgcgt aaccgttgct atcaaaatcg tgcaccagtg tgccaccttt
      481 gatgccgtcg aagaaattca tcgggcctat ccaagccgag ccgctccaat tccacagggt
      541 tgcgtggccc atcgaatcga aaaccacgac tgaagagtca ttaccgacac cgtgaaattc
      601 tccggttatc aggccattga gttgcgccgg cattcctacg ctttcattcg cctcgaccat
      661 ctgagtctgg ttctcaccga ataccccgga accagaatcc cagaccctga tattgaggtc
      721 accgcccgaa ctggcagata tcaattcagc cgaaccgtcg ccatcaaggt cagcgagatg
      781 agcatcgata gaacctgagg gtagactata gtttgatacc gccgacaacc caagggcatt
      841 tgcaaaatga acgcacatct gcatctcact ggaatcgaaa accccgatat catcatcgcc
      901 gtcattatcg atatcaccga cgcgtatatc ggttgcatta tcgcaggtcg taacccaatt
      961 cgaggtcatc gtctgagccg atgaattcca ttcaaataca ccaaccatcg ctcctgaagc
     1021 agattcgttc aagacgatta cttctggtaa agcatcgcca tcgacagatg caatttcaat
     1081 atcggtaatg gtaccgaact gccacaaccc accaccaacc tccggagaaa aggaaacgtt
     1141 cagagaggtg ctggaaattg atgcagaggg tggcagaatg aaaccctggc cctgtgatga
     1201 attacttgaa atctgaa
//
LOCUS       DTVW01000963            2011 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2193352, whole
            genome shotgun sequence.
ACCESSION   DTVW01000963 DTVW01000000
VERSION     DTVW01000963.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2011)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2011)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2011
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2193352"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1018
                     /locus_tag="EYO87_12555"
     CDS             <1..1018
                     /locus_tag="EYO87_12555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009506055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HIC66802.1"
                     /translation="MGAEVIMIERPGVGDPARQFPPLFRALNRGKRSVALDLKSADGL
                     AQFRTLAQTADVIVEGFRPGKLAALGAGFQDIRKINPSLVYVSISGYGQDGPYRDRAG
                     HDLSYEGVGGLLADQADAGQAGPLPTVPLADIGAALFAAIAILSAVVSSQRTGQGRYV
                     DVSMSDAVVSMLTAFLVPAANGTPLGEFIAEPAYGVFTCKDGKLMTLSIAHEDWFWTP
                     FCDVIGKPELAGLKGRERVARKDALREEIAAVLVSKTRDDWGDLFDRAGVPWGPLHSL
                     VETLDDPHVRARQLLRTIAHDSGKTETFLVQPLKFGDFDSEISGLPPEIGADNDSVFA
                     GGSD"
     gene            complement(1041..1829)
                     /locus_tag="EYO87_12560"
     CDS             complement(1041..1829)
                     /locus_tag="EYO87_12560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009803527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HIC66803.1"
                     /translation="MSELLAIKGRTAFVTGAGQGVGRQVALYLAQHGAGAVVVNDFHA
                     ERAESVAAEVETAGAKALPLAFDVSDFEAVGAAFAKVQETFGSVDILVNNAGNAGPTS
                     RLDDLVPFWESDPSEWRRWMATNFDGVLNCTRHAMPLMVKGGYGRIVTVISDAGRVGE
                     PHLAVYSGAKAGAAGFMRAIAKAGGRFGITANCVALGGTRTPAVADLIPDAETEKRAL
                     SQYVIRRLGEPEDPAGMILFLCSDAASWITGQTYPVNGGYSFAC"
     gene            complement(1844..>2011)
                     /locus_tag="EYO87_12565"
     CDS             complement(1844..>2011)
                     /locus_tag="EYO87_12565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009506057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIC66804.1"
                     /translation="YAYVMENGRIVMDGPADKLANNEDIKEFYLGVTASGERKSYREI
                     KHYRRRKRWLG"
BASE COUNT          342 a          641 c          633 g          395 t
ORIGIN      
        1 catgggggcc gaggtgatca tgatcgaacg accgggggtc ggcgatccgg cccggcagtt
       61 tccgccgttg ttcagggccc tgaaccgtgg caagcgcagc gtggcgctcg acttgaaatc
      121 cgccgatggc ctcgcacaat ttcgcaccct tgcgcaaacc gccgatgtca ttgtcgaggg
      181 ctttcgtccc ggaaaactcg cggcgctcgg tgccgggttc caggacatcc gcaagatcaa
      241 tccgagcctc gtttacgtgt cgatttcggg atacgggcag gatggccctt atcgggacag
      301 ggcagggcac gatctgagct atgaaggggt cggtggcctg ctggccgatc aggcggatgc
      361 ggggcaggcc ggaccgctgc ccaccgtccc cctggcggat attggcgcgg cgctgtttgc
      421 ggctatcgcg atcctgtcgg cggtcgtctc cagccagcgt acggggcagg ggcgttacgt
      481 ggatgtctcg atgtcggacg ctgtggtctc catgctcacc gccttccttg ttccggcggc
      541 caatggcacg ccgcttggcg agttcatcgc cgaaccggcc tatggcgtgt ttacctgcaa
      601 ggacggcaag ttgatgacgt tgtctatcgc gcatgaggac tggttctgga caccgttctg
      661 cgatgtgatc ggcaagccgg agcttgctgg attgaaaggt cgcgagcgtg tcgcccgtaa
      721 ggacgcgctg cgcgaagaga tcgcggcggt gctggtcagt aagacgcgcg atgactgggg
      781 cgatctgttc gaccgcgcgg gcgtgccctg gggcccgctc cattcgctcg tcgaaacgct
      841 tgatgacccg catgtgcgcg cccgccaatt gttgcgcacc atcgcgcatg acagcggcaa
      901 gacagagact tttctggtcc agccgctgaa gttcggcgat tttgactccg agatttcggg
      961 cctgcctccg gagatcggcg ccgacaatga cagcgtcttt gcgggcggct ccgattgacg
     1021 gccacccccc gcatttggcg ctagcaggca aaggaatacc cgccattcac cggataggtc
     1081 tgtccggtga tccaactggc cgcatccgag cagagaaaca ggatcatgcc ggcggggtct
     1141 tccggctcgc ccagccggcg gatcacatat tgcgacagcg cccgcttctc ggtctctgca
     1201 tcggggatca gatcggcgac cgccggggtt ctcgtgccgc ccagggcgac gcaattcgcg
     1261 gtgatcccga accggccacc ggcctttgca atggcgcgca tgaaacctgc cgccccggcc
     1321 ttggcaccgg agtacaccgc cagatgcggc tcgccgacgc ggcccgcgtc cgagatcacc
     1381 gtcacgatac gcccatagcc gcccttgacc atcagcggca tggcgtggcg ggtgcagttc
     1441 aacacaccgt cgaaattggt ggccatccag cggcgccatt ccgacgggtc cgattcccag
     1501 aacggaacca ggtcgtcaag ccgcgacgtc ggaccggcgt tgcccgcgtt attgaccaga
     1561 atatccacgc tgccgaaggt ttcctgtacc ttggcaaagg ccgcgccgac cgcttcgaaa
     1621 tcggacacgt caaaagcgag cgggagcgcc tttgcgccgg cggtttccac ctctgcggcg
     1681 acgctttcgg cgcgctcggc gtggaaatcg ttgaccacaa cggcgcccgc gccgtgctgg
     1741 gccagataaa gcgcgacctg acggcccacg ccttgcccgg caccggttac aaatgcggta
     1801 cgtcccttga ttgcgagcag ttcactcatt ttctttccct atcctatccc agccatctct
     1861 tgcggcgccg atagtgcttg atttcacgat agctcttgcg ttcgcccgag gcggtgacac
     1921 cgagatagaa ttccttgatg tcctcgttat tggcgagctt gtcggccggg ccgtccatca
     1981 cgatacgtcc gttttccatc acataggcat a
//
LOCUS       DTVW01000964            1099 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2193893, whole
            genome shotgun sequence.
ACCESSION   DTVW01000964 DTVW01000000
VERSION     DTVW01000964.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1099)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1099)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1099
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2193893"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..554
                     /locus_tag="EYO87_12570"
     CDS             <1..554
                     /locus_tag="EYO87_12570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012178233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transcription-repair coupling factor"
                     /protein_id="HIC66805.1"
                     /translation="HIREVGFELYQQMLEETIAKLKSGEIEGTPEDEWAPTLNLGVPV
                     TIPESYVPDLDVRLGLYRRLASLTTKVELEGFAAELIDRFGALPREVNTLLLVIRIKA
                     MAKRACIARLDAGPKGATVQFHDDKFPNPAGLVEFLTDQHGQAKVDGNKIVIRRDWSS
                     DADRIKGAFGIARDLAQKARAAR"
     gene            551..>1099
                     /locus_tag="EYO87_12575"
     CDS             551..>1099
                     /locus_tag="EYO87_12575"
                     /EC_number="2.6.1.85"
                     /inference="COORDINATES: protein motif:HMM:PF00425.16"
                     /note="catalyzes the formation of
                     4-amino-4-deoxychorismate from chorismate and glutamine;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate synthase component I"
                     /protein_id="HIC66806.1"
                     /translation="MIRFDHGPLPGGTIFEAPQAVIRADTAAGVIPALAAIESARARG
                     RWLAGYFSYELGYVLDPKLAPLMPAGRAMPLILIGVFDGPRPAPPLPAPGGAIGAPRP
                     LWSRDRYDRAIAATHRYIEAGDCYQVNLTFPMEARATGDPLALYSALAARQPVGEGAF
                     VDLGGPVVLSRSPELFFAADAAG"
BASE COUNT          164 a          354 c          393 g          188 t
ORIGIN      
        1 gccatatcag ggaggtgggc ttcgaactct accagcagat gctggaggaa accatcgcca
       61 agctgaagtc gggcgagatc gagggcacgc ccgaggacga atgggcgccg acgctgaacc
      121 tgggtgtgcc ggtgacgatc cccgaaagct atgttcccga tctcgacgtg cggctgggcc
      181 tctatcgccg cctcgccagc ctgaccacca aggtcgagct ggaaggcttc gcggccgagc
      241 tgatcgaccg tttcggggcg cttccgcgcg aggtgaacac gctgcttctg gtcattcgca
      301 tcaaggcgat ggcgaaacgt gcctgtatcg cgcgcctgga tgcggggcca aagggcgcca
      361 cggtgcagtt ccatgacgac aagttcccca atccggccgg gctggtcgaa ttcctgaccg
      421 atcagcacgg acaggcaaag gtggacggca acaagatcgt catccgccgc gactggtcgt
      481 cggatgcgga ccgcatcaag ggggcgttcg gcatcgcccg cgatctggcc cagaaggcca
      541 gggcggcaag gtgatccgct ttgatcacgg tcccttgccg ggcgggacga tcttcgaggc
      601 cccgcaagcc gtgatccgcg ccgatacggc ggcgggcgtg atcccggccc tcgccgccat
      661 cgaatccgcg cgggcgcgcg gccgttggtt ggcggggtat ttctcttatg agctgggcta
      721 tgtcctggat ccgaaactgg cgccgctgat gcctgcgggc cgcgccatgc cgctgatcct
      781 gatcggcgtg ttcgacggcc cgcgcccggc accgcctttg cccgcccccg gcggggcgat
      841 cggggcgccg cggcccttgt ggtcgcggga tcgctatgac cgggcgatcg ctgcgaccca
      901 tcgctatatc gaggcgggcg attgctatca ggtcaacctg accttcccca tggaggcgcg
      961 ggcgacgggc gatccgctgg cgctgtattc ggcgctggcc gcgcggcagc cggtgggcga
     1021 gggggccttt gtcgatctgg gcgggccggt ggtgctgtcg cgcagcccgg agctgttctt
     1081 tgccgccgat gccgcgggc
//
LOCUS       DTVW01000965            1059 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2195759, whole
            genome shotgun sequence.
ACCESSION   DTVW01000965 DTVW01000000
VERSION     DTVW01000965.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1059)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1059)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1059
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2195759"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(167..364)
                     /locus_tag="EYO87_12580"
     CDS             complement(167..364)
                     /locus_tag="EYO87_12580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66807.1"
                     /translation="MKEGTLVRWLWWVTNSWEPAEWMGVIVGSRMAKTDYEKIRIFSV
                     LASDGTVLEIREDVEGLEVLA"
BASE COUNT          234 a          340 c          239 g          246 t
ORIGIN      
        1 atctccaggt catagtccca cacatttttc cctatgcttc cgtcacgcca aaggacacag
       61 aatacgtcat tagtcatagc tgtgggatca cgcatcttgt caatgatgac acccagcata
      121 ttctcacgtc tatgagagag agcgtgcttc acgagatcac ccaccttcat gccagcacct
      181 ccagtccctc gacatcctct cggatctcta gaactgtgcc gtcgctcgcg agcacggaaa
      241 agatacgaat cttttcgtaa tccgtctttg ccatacgtga tcccacgatg acacccatcc
      301 actcagctgg ctcccagcta ttggtaaccc accataacca tctcaccagg gtaccctctt
      361 tcatcagcca ccctcatgca atatgtcgag atcggtggaa tgcgctttac agatatctcc
      421 gtcagcccac aacacttcca cgtaacggtt gacgttctca ggtcgcagcg gtgagcagtc
      481 ctcgatgacc acacccacgc ctgcgcagtt aggccatccg aacctgaagc tggaagggcc
      541 actgtctgac gggttgtacc tcaccaggtc gcccaccttt gcaatctgtg gcatggattg
      601 cctccgtgct tatagtatac cacaccccgg ctgcagctac acggggtgac ggcgctttct
      661 ttcctcctcc aggttgatca ctgcgccctt tcttgactcc ctctgggtca cgtcatccct
      721 gggtctgaag tcgaacctat cgcgaaacag gcgtcgagca gccagggtga aggcccagaa
      781 accagctgcg atcatcagtg aagttatcag gtcgatgtct tcctctcctc gtcgatgctc
      841 taaaatagat atgctcctgc gaagaccgcc acactgatga gcagcgccag ggagatccac
      901 atcatcccca ggacgatgcg ttgcctggtc gactggattt ccctgatggc ctcctcgagc
      961 tgaccagcga gatcgacatt gtgatctctc atctagatga ttcgactaag cagatcgtcc
     1021 tcgagctcct gctggccatc gaccaggtcg accaggccc
//
LOCUS       DTVW01000966            1405 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2195786, whole
            genome shotgun sequence.
ACCESSION   DTVW01000966 DTVW01000000
VERSION     DTVW01000966.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1405)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1405)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1405
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2195786"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(120..404)
                     /gene="ihfB"
                     /locus_tag="EYO87_12585"
     CDS             complement(120..404)
                     /gene="ihfB"
                     /locus_tag="EYO87_12585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009811081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit beta"
                     /protein_id="HIC66808.1"
                     /translation="MIRSELIQKIADENPHLFRRDVERIVNTVFEEIIDAMARGDRVE
                     LRGFGAFSVKKRDARTGRNPRTGESVDVDEKHVPFFKTGKLLRDRLNGEA"
     gene            complement(666..>1405)
                     /locus_tag="EYO87_12590"
     CDS             complement(666..>1405)
                     /locus_tag="EYO87_12590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_355094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="S1 RNA-binding domain-containing protein"
                     /protein_id="HIC66809.1"
                     /translation="SWTKKNVHPGKIVSTSQEVEVMVLEIDEAKRRVSLGLKQTMRNP
                     WEVFAETHPTGTVIEGEVKNITEFGLFVGLEGDIDGMVHLSDISWDARGEDAIQDFRK
                     GDMVKAVVQDVDVEKERISLSIKALENEHMAEAVDGVKRGSIVTAVVSAIEDGGIEVE
                     YNGVKSFIRRSDLARDRQDQRPERFQLGDKVDARVTNIDTKTRRLGLSIKAREIAEEK
                     EAIDTYGSSDSGASLGDILGAALNRDK"
BASE COUNT          255 a          455 c          415 g          280 t
ORIGIN      
        1 gaccgcgatc agcacgatgg ccagaagggc tacgaacagc agacggatga agcgcatggg
       61 tgatcctcgg atgggggcgc gcggcgatgc gcgacgcgat catccccgtt ctacgccggt
      121 caggcctcgc cgttcaaccg atcacgcagc aatttgccgg tcttgaagaa gggcacgtgc
      181 ttttcgtcga catcaacgga ttcgcccgtg cgcggattgc ggccggtgcg ggcgtcgcgc
      241 ttcttgaccg aaaatgcgcc gaagccgcgc agttccaccc gatcgccccg tgccatcgcg
      301 tcgatgatct cctcgaagac cgtattcacg atccgctcga catcgcgcct gaagagatgc
      361 ggattttcgt cggcaatctt ctggatcaat tcggaacgga tcatcatgcc cccctgatgt
      421 ttgctgctgt ccaggccgcc aaggcagacc gaaccctgtg accgaaagca acgcacgaaa
      481 acacccacaa gtttcctagc gatgccagct ttgacgtttt cgcgcaagct gcttgtttcg
      541 gccaagccct gaaaactgct ggggaaaacg ccagaatgac gtcaggtaca cgccccggtt
      601 caggcaagga agaacccgcc cgcggcggtg gccggggcgg gtgtcgggtc gtgggacggg
      661 cgcgcctact tgtcgcggtt cagcgcggcg cccaggatat cgcccagcga cgcacccgaa
      721 tccgagctgc cataggtgtc gatcgcttcc ttttcctcgg cgatctcgcg ggccttgatc
      781 gacagaccca ggcggcgggt cttggtatcg atattggtga cgcgcgcatc caccttgtcg
      841 ccgagctgga accgctcggg acgctggtcc tgacgatcac gggccagatc gctgcggcgg
      901 atgaacgact tgacgccatt atattccacc tcgatgccac catcctcgat ggcgctgacc
      961 acggccgtca cgatcgagcc acgcttcacg ccgtcgaccg cctcggccat atgctcgttc
     1021 tcgagcgcct tgatcgacag gctgatccgt tctttctcga catccacgtc ctggacgacg
     1081 gccttgacca tgtcgccctt gcggaagtcc tggatggcat cctcgccgcg cgcgtcccag
     1141 ctgatgtcgg acagatggac catgccgtcg atatcgcctt ccaggcccac gaacagaccg
     1201 aattcggtga tgttcttgac ctcgccctcg atgacggtgc cggtcggatg ggtttcggcg
     1261 aagacctccc acgggttgcg catggtctgt ttcagaccca gcgagacgcg gcgcttggct
     1321 tcgtcgatct ccagcaccat cacttcgact tcctgagagg tcgagacgat cttgcccgga
     1381 tggacgttct tcttggtcca gctca
//
LOCUS       DTVW01000967            2582 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2200071, whole
            genome shotgun sequence.
ACCESSION   DTVW01000967 DTVW01000000
VERSION     DTVW01000967.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2582)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2582)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2582
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2200071"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..915
                     /locus_tag="EYO87_12595"
     CDS             <1..915
                     /locus_tag="EYO87_12595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011569787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xylulokinase"
                     /protein_id="HIC66810.1"
                     /translation="AWFDVGARDWSDDLLSRCHLTRDHMPALVEGSAVGGTLRADLAR
                     ELGLPRVPVAGGAGDNCAAAIGAGVVADGSAFISLGTSGVLFAATDGYRPDPATAVHS
                     FCHAVPRTWHQMGVILAATDALEWLSRLTGQSAAQLTSDLSPLRAPGRTLFLPYLGGE
                     RTPHNDARIRGQFLHLDHATDARAAARAVIEGVSFAFADCRDRLAATGTRIEGALALG
                     GGARSDYWLAVLATTLGIPLHVPRSGEFGAALGAARLAQMAATGAGAEIATPPDIART
                     IEPQDNLSEAFSQAHARYQTAYTILKDL"
     gene            917..2209
                     /gene="xylA"
                     /locus_tag="EYO87_12600"
     CDS             917..2209
                     /gene="xylA"
                     /locus_tag="EYO87_12600"
                     /EC_number="5.3.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011569788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xylose isomerase"
                     /protein_id="HIC66811.1"
                     /translation="MTDFFGDIAPVRFDPNASDDLSYRHYDPDEMVMGKRMEDHLRFA
                     VAWWHSFAWPGGDPFGGQTFERPWFGDTMALARMKADVAFEMFALLGQPFFCFHDVDI
                     RPEADSFAENTRRLEEITDYIGQKMAAGGPQLLWGTANLFSNRRYVAGAATNPDPDVF
                     AFAAATVKTCLDATHKLGGQNYVLWGGREGYETLLNTDLKRERQQAGRFLSMAVDYAR
                     KIGFEGAILIEPKPQEPTKHQYDYDVATVYGFLKDFGLEKEVRVNIEQGHAILAGHSF
                     EHELALAAALGIFGSIDMNRNDYQSGWDTDQFPNNVPETALAYYEVLKAGGFTTGGTN
                     FDSNLRRQSLDPVDLLAAHVGAMDVCARGLKAAARMLEDGALETARRARYAAWDQQRA
                     LLDSDLASIADRVMAEGTNPAPVSGRQERLENIVNRYV"
BASE COUNT          433 a          845 c          862 g          442 t
ORIGIN      
        1 gcctggttcg acgtcggcgc gcgggactgg tcggacgatc ttctgtcccg ttgccatctg
       61 acgcgcgacc acatgcccgc gctcgtcgag ggatcggccg tcggcggcac cctgcgcgcc
      121 gatctggcac gcgaactggg cctgccgcgc gtgcccgtgg cgggtggcgc cggcgacaat
      181 tgcgcggctg ccatcggcgc cggcgtcgtc gccgatggca gcgccttcat cagcctggga
      241 acctctggcg tcctgttcgc cgccaccgat ggctaccgcc ccgaccccgc cacggccgtg
      301 cacagcttct gtcacgcggt tccccggacc tggcaccaga tgggcgtgat cctggcggcg
      361 acggatgcgc tggaatggct gtcgcggctg acgggccagt cggcggcgca gctgacctcg
      421 gacctgtcgc cgctgcgcgc acccggccga acgctgttcc tgccctatct gggcggagaa
      481 cggacgcccc ataacgacgc gcgcatccgg ggccagttcc tgcatctgga ccacgccacc
      541 gatgcccgcg cggccgcccg cgcggtgatc gagggcgtgt ccttcgcctt cgccgattgc
      601 cgtgaccggc tggcggcgac cggcacccgg atcgagggcg cgctggcgct tggcgggggc
      661 gcgcgatcgg attactggct ggcggtgctg gccacgacgc tgggtatccc tctgcatgta
      721 ccccggtcgg gcgaattcgg cgcggccctt ggcgcggcgc gcctggcaca gatggcggcc
      781 acgggcgccg gcgccgaaat cgcgacgccg cccgacatcg cgcggacgat cgagccgcag
      841 gacaatctgt ccgaggcctt ctcgcaggcc catgcgcgct atcagaccgc ctatacgatt
      901 ctgaaggatc tctgacatga cagacttttt cggcgatatc gcgccggtcc gcttcgatcc
      961 gaacgcttcg gacgatctca gttatcgtca ctacgatccg gacgagatgg tgatgggcaa
     1021 gcggatggag gatcacctgc gcttcgccgt cgcctggtgg cacagcttcg cctggcccgg
     1081 aggcgatcct ttcggcggcc agaccttcga gcggccttgg ttcggcgaca cgatggcgct
     1141 tgcccggatg aaggccgacg tggcgttcga gatgttcgcc cttctggggc agccattctt
     1201 ctgtttccac gacgtcgaca tccgccccga ggcggacagc tttgccgaga acaccaggcg
     1261 gctggaagaa atcaccgact atatcggtca gaagatggcc gccggggggc cgcagcttct
     1321 gtgggggacg gcaaatctct tttcgaaccg ccgctacgtg gcgggggcgg cgacgaatcc
     1381 cgacccggat gtctttgcct tcgccgccgc gacggtgaag acctgcctcg acgccaccca
     1441 caagctgggc gggcagaatt atgtgctgtg gggcgggcgc gagggctatg agacgctgtt
     1501 gaacaccgat ctcaagcgcg aacgccagca ggcggggcgg ttcctgtcga tggcggtcga
     1561 ttacgcccgc aagatcggct tcgagggcgc catcctgatc gaaccgaagc cccaggaacc
     1621 gaccaagcat caatacgatt acgacgttgc cacggtttac ggcttcctga aggatttcgg
     1681 cctggagaag gaggtcaggg tcaatatcga gcagggccac gccatccttg ccgggcacag
     1741 tttcgaacac gaactggccc tggccgcggc gcttggcatc ttcggatcga tcgacatgaa
     1801 ccgcaacgat tatcaatcgg gctgggacac cgatcaattc cccaacaacg ttcccgaaac
     1861 cgcgcttgcc tattacgagg ttctcaaggc cggcggattt accaccgggg gaacgaactt
     1921 cgattccaat ctgcgtcgcc aatcgctgga tccggtggat ctgctggccg cgcatgtcgg
     1981 cgcgatggat gtctgcgccc gcgggctgaa ggcagccgcc aggatgctgg aagacggcgc
     2041 gctggaaacg gcgcgaaggg cccgctatgc ggcatgggac cagcagcgcg cactgcttga
     2101 ttccgacctg gccagcatcg cagatcgtgt catggccgag ggaacgaacc cggcgccagt
     2161 ctcgggccgg caggagcggc tggaaaacat cgtcaaccgc tacgtctgac cgattgcgct
     2221 tgcgccggga acccggcggg ggccgggctt ttcggccggc cacggcgcag gtgtttgatg
     2281 cggccccttc gcggcagccg ggaccgtagg gcaaaccccc tgaaggatga cggacccggt
     2341 gtagtgcgcc acgaaaattt gcacagtttg acagaaagat ttgcagcaga tcagtttcat
     2401 aaaacggcgc cttaacgagc cgttttatgg caggcgcaag tgaggcgact ttcccaacat
     2461 gacggcgagc cggcactcgc atctgggtgt gccggtcacc gtcaggtttc ggagcctcac
     2521 gccacggtca gccgcaggac attcccgccc atgatgctga ccccggcggg cagggttgcg
     2581 cc
//
LOCUS       DTVW01000968            1622 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2202401, whole
            genome shotgun sequence.
ACCESSION   DTVW01000968 DTVW01000000
VERSION     DTVW01000968.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1622)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1622)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1622
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2202401"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..267
                     /locus_tag="EYO87_12605"
     CDS             <1..267
                     /locus_tag="EYO87_12605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009819988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylglutaryl-CoA lyase"
                     /protein_id="HIC66812.1"
                     /translation="ALSMGVDMFESSVAGLGGCPFAGHGHARAAGNVCTEDAVFLCHE
                     LGIETGIDLDKLIAAANKAEEIIGVPLMGRVMHTGGLDKYRKAS"
     gene            280..1194
                     /locus_tag="EYO87_12610"
     CDS             280..1194
                     /locus_tag="EYO87_12610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009504375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HIC66813.1"
                     /translation="MTKALDGKVVLVTGAGGGIGRDIALMAASEGAAVVVNDLGASLK
                     GTGQTETAAQKVVEEIKAAGGDAIADGGNVTDPDAARAMIEAGVSEFGRIDAVVNNAG
                     ILRDGFFHKMTYEDFDAVVKVHLYGAFNTSRAAADYFREQEGGALVHMTSTSGLIGNL
                     AQANYSAAKLGIAAFSKSVALDLKRWNVRSNCIAPFAWSRMISSIKTDTPEQAARVEK
                     IKEMTPAKVAPMACFLMSDRAADVSGQIFAVRKNEIFLFNQPRPVRSVHSGDGWTADE
                     IAERAIPALKSQFTPLEVSADVFSWDPV"
     gene            1194..>1622
                     /locus_tag="EYO87_12615"
     CDS             1194..>1622
                     /locus_tag="EYO87_12615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009803518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citryl-CoA lyase"
                     /protein_id="HIC66814.1"
                     /translation="MGRRKEKISSDIAWSTSDKISVRGLDLPNEILGHMNLGDLAFLQ
                     LTGRKATPEESRVFNAIVITLVEHGITPSAIAARMTYMGAPESLQAAVAAGLCGLGTV
                     FVGSMEGASRMLYEALPQDKLGTGADLDAIAAETVEKFRAR"
BASE COUNT          329 a          471 c          531 g          291 t
ORIGIN      
        1 gccctgtcga tgggcgtgga catgttcgaa agctcggtcg ccggtcttgg cggctgtcct
       61 ttcgcgggcc acggtcacgc ccgcgccgca ggcaatgtct gcaccgagga tgcggtgttc
      121 ctgtgtcacg agctcggcat cgaaaccggc attgatctgg acaagctgat cgcagcggcg
      181 aacaaggcag aagagatcat cggcgtgccg ctcatgggcc gggtcatgca taccggcggc
      241 ctggacaaat atcgcaaggc aagctgaggg agaatgaaga tgacaaaggc acttgatggg
      301 aaggtggttc tggtcaccgg ggccggcggt gggatcgggc gtgatatcgc cttgatggca
      361 gcctcggaag gcgccgccgt ggtggtcaat gatctgggcg cgtcactgaa gggcaccgga
      421 cagacggaaa ccgcggcgca gaaagtcgtt gaagaaatca aggcggcggg cggcgatgcg
      481 atcgccgatg gcggcaacgt caccgatccg gacgccgcgc gcgcgatgat cgaagccgga
      541 gtcagcgaat tcggccgcat cgacgcggtg gtgaacaacg cgggcatcct gcgcgacggg
      601 ttcttccaca agatgaccta cgaggatttc gacgcggttg tgaaggtcca tctctacggt
      661 gcgttcaaca ccagccgcgc ggcggccgat tatttccgcg aacaagaggg cggtgctctg
      721 gtgcacatga cctcgacctc ggggctgatt ggcaatctgg cgcaggcgaa ttattcggcg
      781 gcaaagctgg gcatcgcggc cttctcgaaa tcggtcgcgc tcgacctgaa acgctggaac
      841 gtgcggtcaa actgcatcgc gcccttcgcc tggagccgga tgatctcgtc tatcaagaca
      901 gacaccccgg aacaggcggc acgggtcgaa aagatcaagg aaatgacacc ggccaaagtc
      961 gctccaatgg cctgtttcct gatgagcgac cgcgcggccg acgtgtccgg acagatcttt
     1021 gcggttcgca agaacgaaat cttcctgttc aaccagcccc gcccggtgcg gtcggttcat
     1081 tccggtgatg gctggaccgc cgacgaaatc gccgagcgtg ccattcccgc gctcaaatcg
     1141 caattcacac cgctcgaagt ttcggcggat gtcttttcgt gggatcctgt ctgatgggaa
     1201 gacgcaaaga aaaaatcagc tccgacattg cctggagcac ctctgacaag atcagcgtgc
     1261 gcgggctcga tctgcccaac gaaatcctgg gccacatgaa tctgggcgat ctggcgttcc
     1321 tgcaactgac cggtcgcaag gcgacgcccg aggaaagccg ggtgttcaac gcgatcgtca
     1381 tcaccctggt cgaacatggc atcacgccct cggccattgc cgcgcgtatg acctatatgg
     1441 gggcgccgga atcgcttcag gcggcggttg ccgccgggct ttgcgggctg ggtacggtct
     1501 ttgtcggctc gatggaaggc gcatccagga tgctttacga ggcgctgccg caggacaagc
     1561 tgggcaccgg cgcagatctg gatgctatcg ccgctgaaac ggtcgaaaaa ttccgcgccc
     1621 gc
//
LOCUS       DTVW01000969            1106 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2202869, whole
            genome shotgun sequence.
ACCESSION   DTVW01000969 DTVW01000000
VERSION     DTVW01000969.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1106)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1106)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1106
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2202869"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(90..863)
                     /locus_tag="EYO87_12620"
     CDS             complement(90..863)
                     /locus_tag="EYO87_12620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008245648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66815.1"
                     /translation="MLTNKKVLAQEKDLVLCEDGSYTLFSHDFDEPYHSTKDGALHES
                     LEKHVKPALSLKTNKEKLTILDICFGLGYNTFATIYYMQKHNIKTKIHIISPEFDKDL
                     VHSLNRFSFPLEFEPIKHIIDTIAKDFYYEDAQFKIEILLGDARQSIPKIKEKVDIIY
                     QDAFSPAHNPLLWTYEWFRDLRVICKDDAILTTYSTAAVIRLGLYENDFYIFVHRAEM
                     MRYSTVASLVMLEGLEYIDMELKKVRNVEARSMKDETYL"
     gene            complement(850..>1106)
                     /locus_tag="EYO87_12625"
     CDS             complement(850..>1106)
                     /locus_tag="EYO87_12625"
                     /EC_number="4.4.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008245649.1"
                     /note="catalyzes the hydrolysis of S-ribosylhomocysteine
                     to homocysteine and autoinducer-2; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="S-ribosylhomocysteine lyase"
                     /protein_id="HIC66816.1"
                     /translation="YMSLLGDPKAKKVAKAWKKSMEDILGVKSEKDIPELNLYQCGTY
                     KMHSLDEAKEIAKNVVSRGIGKMSNKKLQMSKKQLKNANK"
BASE COUNT          319 a          203 c          168 g          416 t
ORIGIN      
        1 ctcttcttct tttctaaaca tattcttcac aatttaaaac ttttacttcc aatattataa
       61 atccttacta aatatatcat tgtagataat tataaataag tttcatcttt catagaccta
      121 gcctctacat tcctcacctt cttcaactcc atatctatat actccaagcc ttctaacatg
      181 actaaagaag ccacagtaga gtaacgcatc atctctgcac ggtgcacaaa gatataaaag
      241 tcattttcat atagtcctaa acgtatgact gctgctgtag aataggtggt gagtatggca
      301 tcatctttac agatgactct aagatctcta aaccactcat acgtccatag tagagggttg
      361 tgcgctggac taaatgcatc ttgatagatg atgtctactt tttcttttat cttgggtatg
      421 ctctgtctag catctcctag taaaatttct atcttaaact gtgcatcttc atagtaaaaa
      481 tctttggcta tggtgtcaat gatatgtttg ataggttcaa actctaaagg aaaagaaaat
      541 ctatttaacg aatgtactaa atctttatca aattctggag aaatgatgtg tatttttgtt
      601 tttatgttgt gcttttgcat gtagtaaatc gtggcaaaag tgttatatcc caggccaaaa
      661 cagatgtcta aaatagtaag tttttcttta tttgtcttga gtgacaatgc aggcttgaca
      721 tgtttttcta aactttcatg taaagcacca tctttagtag agtggtaagg ttcgtcaaag
      781 tcatgtgaaa agagagtata actcccatct tcacaaagta ctaagtcttt ctcttgagct
      841 aatacttttt tatttgttag catttttgag ttgttttttg ctcatttgta attttttatt
      901 tgacattttt cctatgcctc tactcacaac attcttggct atctcttttg cctcatctag
      961 tgaatgcatc ttgtatgttc cacactgata aaggttaagt tcgggtatgt ctttttcaga
     1021 ctttacaccc aaaatatctt ccatagactt tttccaagct ttggctactt ttttagcttt
     1081 tgggtctcca agaagagaca tataaa
//
LOCUS       DTVW01000970            3154 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2203308, whole
            genome shotgun sequence.
ACCESSION   DTVW01000970 DTVW01000000
VERSION     DTVW01000970.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3154)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3154)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3154
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2203308"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(6..875)
                     /locus_tag="EYO87_12630"
     CDS             complement(6..875)
                     /locus_tag="EYO87_12630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011749896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01459 family HAD-type hydrolase"
                     /protein_id="HIC66817.1"
                     /translation="MTCIIDRLARIGPHYEVLFCDLWGCLHNGKHPYPAAVAALQGFR
                     RGGGRVVLMTNAPRPNQYVIAQLDRMGVPRDAWDMVISSGDATQDAMFAGAVGRRVWH
                     LGTPKDDGFFTDIPPEWTDAPPITRVPLDEAEGIIATGPFDESTEAPEDYRARFLLAR
                     ERGLRMLCANPDVVVDMGETRIYCAGALAEFYEDLGGEAFYFGKPHPPIYDRARRLLG
                     LDKKARVLAVGDGIRTDVLGAAQEGIDCLFVTGGLAAEAFGPDVENPDSELLREWLAE
                     HQASPAYSIGRLR"
     gene            complement(875..1792)
                     /locus_tag="EYO87_12635"
     CDS             complement(875..1792)
                     /locus_tag="EYO87_12635"
                     /EC_number="3.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="manganese-dependent inorganic pyrophosphatase"
                     /protein_id="HIC66818.1"
                     /translation="MIKVFGHTSPDTDSTGSPIVWAWYLNEIRQTPAKPVLLGEPNTE
                     AGWMLTRWNLDKPEILTALEPGEKCVIVDTNNPAELPDGINDADVIEIIDHHMLAGGI
                     KTRTPINITIRPLACTATILHDLMGEDADRAPEGVKAAMLTCILSDTLEFRSPTTTPH
                     DRALAERLAADLGIDIAEYAAEMFAAKSDVSAFADDQLLRMDSKEYKLDGTQLRVSVL
                     ETTAPQVLLDRKAGLMAAMPAVAQADGAEQVLLFIVDILKQEATLLVPNDAVRRIAEK
                     SFGVTVTGDSIVLPGVMSRKKQIIPVLAL"
     gene            complement(2016..2525)
                     /locus_tag="EYO87_12640"
     CDS             complement(2016..2525)
                     /locus_tag="EYO87_12640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CarD family transcriptional regulator"
                     /protein_id="HIC66819.1"
                     /translation="MSKTKKSEFRPDDFVVYPAHGVGRIVSIEEQEVAGLRLEMFVIS
                     FDKDKMTLRVPTARASEIGMRSLSSPDLVERALDTLKGKARVKRAMWSRRAQEYEQKI
                     NSGDLMSIAEVVRDLHRSDDQREQSYSERQLYEAALDRLTREVAAVGGLDEGAAQQRV
                     DQVLLSRAA"
     gene            complement(2873..>3154)
                     /locus_tag="EYO87_12645"
     CDS             complement(2873..>3154)
                     /locus_tag="EYO87_12645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin family protein"
                     /protein_id="HIC66820.1"
                     /translation="VCPVDCFYEGENALVIHPDECIDCGVCEPECPADAIRPDTEPDM
                     EKWVEFNRKYSELWPVITQKREPMPNAEEMDGVENKLETYFSEAPGEGD"
BASE COUNT          562 a          996 c          995 g          601 t
ORIGIN      
        1 aacgctcagc gcagccggcc gatgctgtag gcggggctgg cctgatgttc ggccagccat
       61 tcgcgcaaca attcggaatc ggggttttcg acatccgggc cgaacgcctc ggcagcaagg
      121 ccgccggtca cgaaaaggca atcgatcccc tcttgcgcgg cgcccagcac atcggtgcgg
      181 atgccgtcgc ccactgcgag cacgcgcgcc ttcttgtcca gccccagcag ccggcgcgcg
      241 cggtcgtaga tcggcggatg cggcttgccg aaataaaagg cctcgccgcc cagatcctcg
      301 tagaattcgg ccaaggcgcc ggcgcagtaa atccgcgtct cgcccatgtc gacgaccaca
      361 tcgggattgg cgcacagcat ccgcaggccg cgttcgcgcg ccagcaggaa ccgggcgcgg
      421 taatcctcgg gcgcctcggt gctttcgtca aaggggccgg tcgcgatgat accctcggcc
      481 tcgtccagag gcacccgagt gattggcggt gcatcggtcc attcgggcgg gatatcggta
      541 aagaacccgt catccttcgg cgtgcccaga tgccagaccc tgcgtccgac cgcgcccgca
      601 aacatcgcat cctgggtcgc atcgcccgaa ctgatcacca tgtcccaggc atcgcgcggc
      661 acccccatgc ggtccaactg cgcgatcaca tactggttcg gacgcggcgc attggtcatc
      721 agcaccacac gcccgccgcc gcggcggaac ccttgcagcg ccgcgacggc ggccggatag
      781 ggatgcttgc cgttgtgcag gcagccccag agatcgcaga acagcacctc gtaatgcggg
      841 ccgatccgtg ccagccggtc gatgatgcag gtcatcagag tgcgaggacc gggatgatct
      901 gcttcttgcg gctcatcacg ccgggcaaaa cgatgctgtc gccggtgacc gtcacgccaa
      961 aacttttctc ggcgatccgc ctgacggcat cgttgggaac aagcagcgtg gcctcttgct
     1021 tcaggatatc gacgatgaac agcagaacct gttcggcccc gtcggcctgc gccacggccg
     1081 gcatcgcggc catcagcccg gccttgcggt ccagcaggac ctgcggcgcc gtggtttcca
     1141 gaaccgacac gcgcagttgc gtgccgtcca gcttgtattc cttgctgtcc atgcgcagca
     1201 attgatcatc ggcaaaagcg ctgacatcgg atttcgcggc aaacatctcg gccgcgtatt
     1261 cggcgatgtc gatacccaga tccgcggcca gtctttccgc cagggcgcgg tcatgggggg
     1321 tggtcgtcgg gctgcggaat tccagcgtgt ccgacaggat gcaggtcagc atcgcggcct
     1381 tgacgccttc gggcgcgcgg tcggcatcct cgcccatcag atcgtgcagg atggtcgcgg
     1441 tgcaggccaa gggacggatg gtgatgttga tcggcgtgcg ggtcttgatg ccgccggcca
     1501 gcatgtgatg gtcgatgatc tcgatcacat cggcgtcgtt gatgccgtcg ggcaattcgg
     1561 cggggttgtt ggtgtccacg atgacgcatt tctcgcccgg ctcaagcgcc gtcaggatct
     1621 cgggcttgtc gaggttccag cgcgtcagca tccagccggc ttcggtattg ggttcgccca
     1681 gaagcactgg cttggcgggg gtctgccgga tctcgttcag ataccaggcc cagacgatgg
     1741 gagacccggt cgagtccgta tcgggagagg tatggccgaa aaccttgatc atggggcacc
     1801 tttgcggatt tcagaagtcg cgcgccttat agggctgcgg tctggcgatg tccacgcagg
     1861 cagggcacgc aggacaagcg cggtgcagga ttgccctgtg gcgtcccggc agcagagact
     1921 gtcgcgcgat gtccgcgcag cgaacagggc cgtgatcgtc gcaaaaaagg cgcccccggc
     1981 gggacgcctt ttcagatgtc cgggatctgg caggctcagg ccgctcgcga caacagaacc
     2041 tgatcgacgc gctgctgcgc ggccccctcg tccaatccgc cgacggccgc gacctcgcgg
     2101 gtcagccggt ccagcgcggc ttcgtagagt tgacgttcgg aataggattg ctcgcgctga
     2161 tcgtcgctgc gatgcaggtc gcggacgacc tctgcgatcg acatcaggtc gccggaattg
     2221 atcttctgct cgtattcctg ggcacggcgc gaccacatgg cacgcttgac tcgggccttg
     2281 cccttcagcg tgtccagcgc gcgttccacc agatccgggc tggacaggct gcgcattccg
     2341 atctcgctgg cgcgggcggt gggcacacgc agggtcatct tgtccttgtc gaacgagatg
     2401 acgaacattt ccagccgaag tcccgcgacc tcttgttctt cgatcgaaac gatgcgaccc
     2461 acgccatggg ccggatagac gacgaaatcg tcggggcgga attcgctttt cttggtcttg
     2521 gacatatggc ttcctctagg tggcgccccg acacgcggtg cgcaaaaagc cgacagcggc
     2581 ggctgccgcc ttcggctgat cttggttctt gtcattgcct acgccggcag cagcgcaggg
     2641 tttggcatca tgggcgcgca tccttggggc ctctgactcc cgtcagatgc gaatgtgaaa
     2701 tgaacatagc ataaattcga ctgcaaaaaa agcgtcacga aaacagaccg atctgtccgt
     2761 tcggacagat tttcagggcg agaagtcaag gacttcgcaa gcccggggcg aaacggcacg
     2821 attcatcccg caggcgaatc acccgtcggt tcggtttcgc aactggcgaa aatcagtcgc
     2881 cttcgcccgg cgcttccgag aaatatgtct cgagcttgtt ctcgaccccg tccatttcct
     2941 cggcgttcgg catcggctcg cgcttctggg tgatgacggg ccagagttcg gaatatttcc
     3001 ggttgaattc gacccatttt tccatatccg gttcggtatc cggacggatc gcgtcggccg
     3061 ggcattccgg ttcgcagacg ccgcaatcga tgcattcatc gggatgaatg accagcgcat
     3121 tctcgccctc gtagaaacaa tcgacggggc agac
//
LOCUS       DTVW01000971            1983 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2203958, whole
            genome shotgun sequence.
ACCESSION   DTVW01000971 DTVW01000000
VERSION     DTVW01000971.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1983)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1983)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1983
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2203958"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..785
                     /locus_tag="EYO87_12650"
     CDS             <1..785
                     /locus_tag="EYO87_12650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_351795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HIC66821.1"
                     /translation="VPTTGQTRFTALSSGEVDLLARNSTWTFSRDTDLKLDFVAVNYY
                     DGQGFMVPKDLGVTSAKELDGATICIQTGTTTELNLADYFKANNMSYQPVNIDSNAEG
                     EQQYMAGACDAYTTDASGLAATRAAFANPENHVILPEIISKEPLGPAVRQGDDLWADI
                     VRWSFYALVAAEEYGVTSKNIDELVKSSQNPEVQRLLGVTDDLGAMIGLDKEWAKRAI
                     QASGNYGEIFAANIGEQTPIGLARGLNAQWTQGGLMYAPPFR"
     gene            949..>1983
                     /locus_tag="EYO87_12655"
     CDS             949..>1983
                     /locus_tag="EYO87_12655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_351796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HIC66822.1"
                     /translation="MLIYDRRYRSMTFQVIVFILVMALGWWLINNTIQNLRALGKDFD
                     FGFLFQRAGYDIPQTPIPYTSDDTHLRAAIVGLLNTIIVSVLGCVAATILGVGVGVAR
                     LSNNWLFARLMTIYVEMFRNIPLLLWILIIYALFTEIMPAPNAYRGENPAWSKILFDN
                     VALTNRYTAIPGLGMTNDPGSLDLGARVTISWATIAFAAALIAGWFLRRAILAWAQVT
                     QDRTGRRPTTWWINLGVMVVPSLLLIWFFGLHLLPPELKGFNFTGGLNVQNALVALWL
                     ALTLYTGAFIAEIVRAGILAVNKGQSEAAFALGLRPNRTMNLVILRWLQETYACEVVT
                     FTADLGQGEEL"
BASE COUNT          364 a          630 c          615 g          374 t
ORIGIN      
        1 atgtgccgac gaccgggcag acccgcttta ccgcgctgtc atcgggcgag gtcgatctgc
       61 tggcccgcaa ctcgacctgg accttctcgc gcgacaccga cctgaagctg gatttcgtgg
      121 ccgtgaacta ttacgacggt cagggcttca tggtgcccaa ggatctgggc gtgaccagtg
      181 ccaaggaact ggacggtgct accatctgca tccagaccgg caccacgacc gaactgaacc
      241 tggccgatta cttcaaggcc aacaacatga gctatcagcc ggtcaacatc gacagcaacg
      301 ccgagggcga gcagcaatac atggccggcg cctgcgatgc ctatacgacc gacgcatcgg
      361 gtcttgccgc cacccgcgcg gcctttgcca atcccgaaaa ccacgtcatc ctgcccgaga
      421 tcatctcgaa agagccgctg ggccccgccg tgcgccaggg cgacgatctg tgggccgata
      481 tcgtgcgctg gtccttctac gcgctggtcg cggccgagga atacggcgtc acctcgaaga
      541 atatcgacga gctggtgaaa tcctcgcaga acccggaggt gcagcgtctg ctgggcgtga
      601 ccgacgatct tggcgcgatg atcggactgg acaaggaatg ggccaagcgc gccatccagg
      661 ccagcggcaa ttatggcgag atctttgcgg ccaatatcgg tgaacagact ccgatcgggc
      721 tggcgcgagg tctgaatgcg caatggaccc agggcgggct gatgtacgcc ccgccgttcc
      781 gctgatcgga cgagacaatc ttgtcggggg cgccatggcg cccccgatgg cttcaagaac
      841 aacgacaagc cggtcggcca gaagcggcac gaaagctgca ggaccggatg caggggtaaa
      901 gccatgacgg atgtttcggc accggcgaat ccgccgttcc gactgaacat gctgatctat
      961 gaccggcgct atcggtcgat gaccttccag gtgatcgtct tcattctggt gatggcgcta
     1021 ggatggtggc tgatcaacaa cacgatccag aacctgcgcg ccctgggcaa ggatttcgat
     1081 ttcggcttcc tgttccagcg cgcgggctac gacatcccgc agaccccgat cccctatacg
     1141 tcggatgaca cgcatctgcg tgcggccatt gtcgggctgc tgaacacgat catcgtctcg
     1201 gtcctcggct gcgtcgcggc gaccatcctg ggcgttgggg tgggtgtggc gcgcttgtcg
     1261 aacaactggc tgttcgcccg gctgatgacc atctatgtcg agatgttccg caacattccc
     1321 ctgctgctgt ggatcctgat catctacgcg cttttcaccg agatcatgcc ggcgcccaat
     1381 gcctatcgcg gcgagaatcc ggcctggtcg aagatccttt tcgacaatgt cgccctgacc
     1441 aaccgctata ccgccattcc cggactgggc atgaccaacg atccgggcag tctggatctg
     1501 ggcgcgcgcg tgaccatcag ctgggccacg atcgccttcg ccgccgccct gatcgcgggc
     1561 tggttcctgc gccgcgcgat cctggcatgg gcgcaggtca cgcaggaccg gaccggccgc
     1621 cggccgacca cctggtggat caatctcggc gtgatggtcg tgccctcgct gctgctgatc
     1681 tggttcttcg gcctgcatct gctgccaccg gagttgaagg gtttcaactt taccggcggg
     1741 ctgaacgtcc agaacgcgct ggtcgcattg tggctggcgc tgaccctcta taccggcgcc
     1801 ttcatcgccg agatcgtgcg cgcgggcatc ctggccgtga acaagggtca aagcgaggcg
     1861 gccttcgcgc ttggcctgcg gccgaaccgg accatgaacc tggtgatcct gcgttggttg
     1921 caggagacct acgcctgcga ggtggtgaca tttaccgccg acctcggcca gggcgaagag
     1981 ctc
//
LOCUS       DTVW01000972            5739 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2204432, whole
            genome shotgun sequence.
ACCESSION   DTVW01000972 DTVW01000000
VERSION     DTVW01000972.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 5739)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5739)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5739
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2204432"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            71..1471
                     /locus_tag="EYO87_12660"
     CDS             71..1471
                     /locus_tag="EYO87_12660"
                     /inference="COORDINATES: protein motif:HMM:PF00535.24"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HIC66823.1"
                     /translation="MHLWATGSAEGAPAWRGAMRAADRVIVEGTEKEWAAFRPDHVIR
                     RATEPAACSLAALDERKPDLLLVPTASDAYQFPAFRALIDQPTLYSGVLAEYRYNFAP
                     AEFARHFNNDRLKIVGESNRMMQRYLLQAARVVLLPATSLRPPVELAQIAMDAISSGA
                     VPILYGNGGEDEPLLSDLDRIHDAVALRRLLLLLRIDWFRERRLRALLREVWRNHVWR
                     SRDRAAILGRDPFAADFDQPKITVVLVTKRPHLIENCLDTFRKQTWPNKELVLIFNTG
                     SVPSDLPELARNERVFALPEAANIGECLNMGVAAGRGKYWVKVDDDDFYSRYYLEETA
                     GYYRTSQADIVGRQSVYYYFDKYGKYQSRDLLARRCFKLQKNQEHISGASLSSDFHRK
                     TAAFSQKDRNACDSNWNQRNLADGMRLFCGDSTSLMVFRDADEANHTWKMSRTRGFLE
                     RFVMRSSDMFERMEET"
     gene            1468..2367
                     /locus_tag="EYO87_12665"
     CDS             1468..2367
                     /locus_tag="EYO87_12665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66824.1"
                     /translation="MTMIRGKVVGCMATFPGRFDIIRQTVASIACQLDALLLYVNEST
                     EGLPDLSDLRNVTVFEGQDHAGDLLANGKAYLLKFLQDCEVFTLDDDFIYPPDYVAKN
                     LDILRKMGGRCLVTTHGSVVQEDCDWYYERHSVFTSTSGVVGLQMCNLAGSGTACFDQ
                     RRMPVDADDLLEKVMVDLKLSLAARDAGLPLFVLPREEGWLTVIRKPGLWEKYSGVEI
                     THHTELARRERGDFATHARNARTALAAAGIGPAGIGLDPATAHCLDHGGLPPGWKHDL
                     TSILTRDNYLSLLNRILDDETIA"
     gene            2364..3929
                     /locus_tag="EYO87_12670"
     CDS             2364..3929
                     /locus_tag="EYO87_12670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66825.1"
                     /translation="MTVAIVIGTGRSGTSLAMQALDALGFPVVGDAVPAGENNLRGTG
                     EAVELRDAMFRLHRSLGGPRGFLPDGWQNTSVACDTREWLTRYLSLGAADEGQPNLAL
                     KFPLSSLFLPLLRDAVREAAVEPVWIWATRPPAEVIASLMRAYHSTVENATATWVQRT
                     FYLLRDSPDDTHLLPFGTWRENSDAQVAYLAGTLGCEDGERIAAAKACFSARLDHAQS
                     DAPPLSDQAAAALERVSSMLDGKKGRLADLVSRDSDQFCDALMMLGTALNKLVPPSSI
                     TDDEAALRLAMLERLSQDPAEEAKMKDELEVLASRIREVAAENAKLLRQSSTDSGNVK
                     NNTKSDGNSTGATVKDGARMREVEISRLSEENRTLRNELAKVRAAGEEQAELFKTERK
                     QFEALRLSYQTLAQARDDAEESAETHHRAKLGAAEMRASILERRALRHEAQNEKLQQR
                     LNAMSSEADSSAIASLREENLELSVRYKEAHQKLARTAAKLAESEAEKKRMRRSKSWR
                     VTAPLRKLRQLFP"
     gene            complement(4148..4552)
                     /locus_tag="EYO87_12675"
     CDS             complement(4148..4552)
                     /locus_tag="EYO87_12675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012430560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66826.1"
                     /translation="MVPQESIRMDFGDGTDQFVLMVRREGKSEGTGALAGASVSEFGW
                     HDIDPPKGGDPQGYLQFTTENGDVANIKFTVRAVFMKDGDKPRLVDYGFWELVSGSGQ
                     FEGMTGVGTLTIKSVSETDRQFSLDGELGARP"
     gene            complement(4819..5553)
                     /gene="trmB"
                     /locus_tag="EYO87_12680"
     CDS             complement(4819..5553)
                     /gene="trmB"
                     /locus_tag="EYO87_12680"
                     /EC_number="2.1.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009564255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(46)-N7)-methyltransferase TrmB"
                     /protein_id="HIC66827.1"
                     /translation="MSDTPKSAFDPNPPRRNFYGRRHGKTLRHSQKGYLAEDLGDLRP
                     HGISVQENPERKPIDPAAIFGDDRRVWLEVGFGGGEHMVHMAATHPDIGIIGCEPFIN
                     GVAMLLGKIRAAGLGNVSVHPGDARDLMDVLPDGGIDRAFLLYPDPWPKARHHRRRFV
                     TPEHLLPLARVLRPGAQFRVATDIPDYVRQALEEVPLAGFDLVRQGADPWDDWISTRY
                     EQKALRVGRTPHYLTFRRHKAQVRES"
BASE COUNT         1167 a         1701 c         1716 g         1155 t
ORIGIN      
        1 cagtctgaca ggcgatcttc ccgaacgcgg caccgccttt ttcgatgccg cccgcgacgc
       61 tggcgtttcg gtgcatctct gggcgaccgg cagcgctgaa ggcgcgcccg catggcgggg
      121 cgccatgcgg gccgcagatc gcgtcatcgt cgagggaacc gagaaagaat gggcggcgtt
      181 ccggcccgac cacgtcatcc ggcgcgcgac cgagcctgcc gcctgttcgc ttgcggcgct
      241 ggacgaacgc aagcccgatc tcctgcttgt gcccacggct tccgacgcct atcagtttcc
      301 cgcttttcgc gcgctgatcg accagccgac cctgtacagc ggagttcttg cggaataccg
      361 ctacaacttc gccccggcgg aattcgcgcg acatttcaac aatgaccggc tgaaaattgt
      421 cggcgaatcc aaccggatga tgcaaagata cctgttgcag gcggcacgag tggtgttgct
      481 gccggcaacc agcctgcgcc cccctgtcga actggcacaa atcgccatgg acgccatttc
      541 cagcggcgcg gtcccgatcc tttacggaaa tggcggcgag gatgagccgc tgctgtcgga
      601 cctggatcgg atccacgatg ccgtggcctt gcgcaggctt ctgctgctgc tgcgaatcga
      661 ctggtttcgc gaacgtcgcc ttcgtgctct gctgcgcgag gtgtggcgca atcatgtctg
      721 gcggtcacgg gaccgtgcgg cgatcctggg tcgcgaccca ttcgctgcgg atttcgatca
      781 gccgaagatc accgtcgttc tcgtcaccaa aagaccccac ctcatcgaaa attgcctgga
      841 cacattccgc aagcagacct ggccgaacaa ggagctggtg ctgattttca ataccgggtc
      901 cgtcccctcc gatctgccgg aactggcccg gaacgagcgt gtctttgcct tgccggaagc
      961 ggcaaatatc ggcgaatgcc tgaacatggg cgtggcggcg ggacgcggga aatattgggt
     1021 gaaggtcgat gacgacgatt tctacagccg ttattatctt gaggagacgg cggggtatta
     1081 ccggacgtca caggccgata tcgtcggacg acaatctgta tattactatt ttgacaaata
     1141 tggaaaatat caatcacgtg atctgcttgc gcgacgatgc ttcaagttgc agaaaaatca
     1201 ggagcatatc tctggcgcat cgctgtcatc agattttcac agaaagactg ccgccttttc
     1261 tcagaaggac cgtaatgcct gtgattcgaa ctggaatcag cggaacctag ccgatggaat
     1321 gcgcttattc tgtggcgatt ccacatctct aatggtcttc cgagatgccg atgaggcgaa
     1381 tcatacttgg aaaatgtctc ggacaagggg tttcttggaa cggtttgtta tgaggagctc
     1441 tgacatgttc gaaaggatgg aagaaacatg accatgatcc ggggaaaagt cgtgggctgc
     1501 atggcaacct ttcccggtcg tttcgacatc atacgccaga ccgtggcaag catcgcttgt
     1561 caacttgatg cgctgcttct ttatgtcaat gaatcgaccg agggcctgcc tgatctttcc
     1621 gatcttcgca acgtcaccgt ttttgaaggg caggaccatg ccggtgatct gctggccaat
     1681 ggcaaagcct atcttctgaa attcctgcaa gattgcgagg tgttcacgct ggatgatgat
     1741 ttcatctatc cgccggatta tgtcgcgaaa aatcttgata ttcttcgcaa gatggggggg
     1801 cgttgcctgg tgacaacgca tggatccgtc gttcaggagg attgcgattg gtattatgag
     1861 cggcattccg tctttaccag caccagcgga gtggtcgggt tgcagatgtg caatcttgcc
     1921 ggcagcggca cagcgtgctt cgaccagcgc cggatgcccg tcgatgctga cgacctgctt
     1981 gagaaggtca tggttgacct caagctcagt ctcgccgcgc gagatgccgg tctgcctctg
     2041 ttcgtcttgc cgcgcgagga aggctggctg acggtgatcc gcaagcctgg tctttgggag
     2101 aaatattccg gcgtggaaat cacgcatcac acggaactgg cacggcggga aaggggggat
     2161 ttcgccaccc atgcccgcaa tgcccgcacc gcgctggccg cggccgggat cggtccggcc
     2221 gggataggac ttgacccggc gacggcccat tgtcttgacc atggcggcct tcccccggga
     2281 tggaaacatg atctgaccag tattctgacg cgcgacaact atctgtcgct gctgaaccgg
     2341 atccttgatg acgagacgat cgcatgaccg tcgccatcgt gatcggaacg ggtcgcagcg
     2401 gcacgtcgct tgcaatgcag gcgctggacg cgcttgggtt tccggtcgtc ggcgatgccg
     2461 tgccggccgg agagaacaat cttcgcggga ccggcgaagc tgtggaactg cgcgacgcca
     2521 tgttccggct gcacaggtcg cttggcggcc cgcgcggttt ccttccggat ggatggcaga
     2581 acacgtctgt cgcgtgcgac acgcgcgaat ggctgacacg gtatctgagc ttgggcgcgg
     2641 ctgacgaagg acaaccgaat ctggcgctga aatttccgct ttccagcctg ttcctgccgc
     2701 tgcttcgcga tgctgtcaga gaggccgcgg tggaaccggt ctggatctgg gccacccgcc
     2761 cgccggccga agtcattgca tccttgatgc gcgcctatca ttccaccgtc gaaaacgcga
     2821 cagcgacctg ggtccagaga actttctatc tgctgcgcga ttccccggac gatacccatc
     2881 tcttgccatt cggaacctgg cgggaaaatt ccgacgctca ggtcgcatat ctggccggga
     2941 cgcttggttg cgaggacggc gaacggatcg ctgccgcaaa agcctgcttc tctgcacgcc
     3001 tcgatcatgc gcagtccgat gcgccgccgc tatctgatca ggccgccgcc gcactggaac
     3061 gggtctcatc catgctggac ggaaaaaagg gtcgcctcgc cgatctcgtg agccgggact
     3121 cggatcagtt ttgcgacgcc ttgatgatgc ttgggacggc gctgaacaaa ctggttcccc
     3181 cgtcgtcgat cacggatgac gaagccgcgc ttcgattggc gatgctagaa cgattgtcgc
     3241 aagatccagc tgaagaggcc aagatgaagg acgaactgga ggttctggca agccgcatcc
     3301 gcgaagttgc cgcggagaat gcaaaattgc ttcgccaatc ctcaaccgat tccgggaacg
     3361 tgaaaaacaa cacaaaatcg gatggaaatt ctaccggcgc gactgtcaag gatggcgcgc
     3421 gcatgcgtga ggtcgagatt tctcgactgt ccgaagaaaa tcgaacgctg cgaaacgaac
     3481 ttgccaaagt ccgggcggcc ggcgaggaac aagccgaatt gttcaagacc gagaggaagc
     3541 aattcgaagc cctgcgcctg tcctatcaaa cgcttgccca ggcgcgcgac gatgcggaag
     3601 aatctgccga aacgcatcat cgcgcaaagc tcggtgctgc cgagatgagg gccagcattc
     3661 tggagcgacg cgcccttcgg cacgaggccc aaaacgaaaa attgcagcag cgcctgaatg
     3721 ccatgtcgtc tgaagccgac agcagcgcca tcgcgtctct ccgtgaagaa aatctagaac
     3781 tttcagtccg ctacaaggaa gctcatcaga agttggcaag gacggccgcg aaacttgccg
     3841 aaagcgaggc cgaaaaaaag cgcatgcgtc ggagcaaatc atggcgcgtg accgcgccgc
     3901 ttcgcaaatt acgccaactt tttccctagc gttcgaattc tcatcccgaa cacgacgagg
     3961 gctgcgacaa ttcggatcgg caggaacgcc tgctgcagcg cattgcccgg aattcgccga
     4021 tcctgattcg cggaaggccg gcggcgatgg cctcgcgggt tgaccgttcc catcttgaga
     4081 tgggcatctc ctcgtagtcc gggccagtgc cgacaatccg ccgctgggac gccgcttgcg
     4141 atcgatttta gggacgggcg cccagttctc cgtccaggga gaactggcga tccgtttccg
     4201 ataccgattt gatggtcagt gtgccgacgc cggtcatgcc ctcgaattga cccgatccgc
     4261 tgacaagttc ccagaacccg taatccacca gacgaggctt gtcgccatcc ttcatgaaaa
     4321 ctgccctgac ggtaaacttg atattcgcga cgtcgccgtt ttcggtcgtg aattgcagat
     4381 agccttgggg atcgccacct tttggcggat cgatatcgtg ccaaccgaat tctgataccg
     4441 aagcacctgc cagtgcgccg gttccttcgg atttgccttc tctacgcacc atgaggacaa
     4501 actggtcggt tccgtcgcca aaatccatcc ggattgattc ctgtggcacc atcacggcct
     4561 ccacagtgac tttctcagca taggctgatg acaccaatga tagcgttgtc gttccggcaa
     4621 caaggccagc ggtcagcagg gttctgaaca ttttaactcc agggtgaatg gcaagggaga
     4681 ggtccggcct ccggaaacga attcgatatc accgtgccta acgcccggac tttggcgcgg
     4741 tcaatgcacg tccgatcaca acccatgacg ataatattcc cccgagtggc gcaggcgcgg
     4801 cgtcccgcgg accagccttc acgattcccg gacctgtgcc ttgtgacggc ggaaggtcag
     4861 gtagtgcggg gtgcgcccca cgcgcagggc cttttgttcg tatctcgtgc tgatccagtc
     4921 atcccaggga tcggcgccct gtcggaccag atcgaatccg gccaggggca cctcttccag
     4981 cgcctgacgg acgtaatcgg gaatgtcggt cgccacccgg aactgcgcgc ccggccgcag
     5041 cacccgcgcc agcggcagca gatgttccgg cgtcacgaaa cggcggcggt gatgacgcgc
     5101 cttgggccat ggatcgggat aaagcagaaa ggcccggtcg ataccgccat cgggcagcac
     5161 atccatcaga tcgcgcgcat cgcccggatg cacgctgaca ttgcccagcc cggcggcgcg
     5221 gatcttgccc aacagcatcg cgacgccgtt gatgaagggc tcgcagccga tgatgccgat
     5281 gtcgggatgg gtcgcggcca tatgcaccat atgttcgccc ccgccgaagc cgacctccag
     5341 ccagacccga cgatcgtcgc cgaagatcgc cgccgggtcg atcggcttgc gttcgggatt
     5401 ttcctgcacc gagattccgt gcggcctgag atcgcccaga tcctcggcca gataaccctt
     5461 ctggctgtga cgcagggtct tgccatgccg cctgccatag aaattgcggc gcggcggatt
     5521 gggatcgaag gcggatttcg gggtatcgct catgcgcggg acttgccgca aggccgggct
     5581 cgggtcaagc cttcggcggg tccggttgcg tcccgcgacg accgggggcg ctgcccccgg
     5641 acccccgagg tatttgtaaa gagagcgaag cggtgacgcg aaactaatta ctctggcaaa
     5701 ttgccgcaag attgcggaac ctgatgccgc aattttttc
//
LOCUS       DTVW01000973            2082 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2205107, whole
            genome shotgun sequence.
ACCESSION   DTVW01000973 DTVW01000000
VERSION     DTVW01000973.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2082)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2082)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2082
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2205107"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..401)
                     /locus_tag="EYO87_12685"
     CDS             complement(<1..401)
                     /locus_tag="EYO87_12685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019955468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1730 domain-containing protein"
                     /protein_id="HIC66828.1"
                     /translation="MKEALAAEALAAGFAKMRVARPDAIPEAAGRLRAFLQAGRHGQM
                     GWMAERSHWRGDPAALWPEARSVVMLADLYTPDHDPLAVLEARDRAAISVYAQGRDYH
                     DLVKKRLKRLGRWMLTRHQDEAIKVFVDTAPV"
     gene            complement(481..1167)
                     /locus_tag="EYO87_12690"
     CDS             complement(481..1167)
                     /locus_tag="EYO87_12690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010400365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HIC66829.1"
                     /translation="MNTNTQTTRLYHSTLSPFCRKVRLVLAEKKIEVELVEEKYWENP
                     PDLKRRNPAGKLPVLRFRGTMLAESQAIVEYIDEVVSESPLMPRGALDRHEVRRLCAW
                     FDDKFNSEVTQPILNERVWKKILRSGYPDSRAVKDGLRAIKEHMDYLAGLLEDRRWLA
                     GGAMSLADFTAAAHFSCLDYISDVDWDRSEVLRDWYATIKSRPAFRGVLADQVPGIQP
                     APHYAELDFG"
     gene            complement(1247..1975)
                     /gene="mtgA"
                     /locus_tag="EYO87_12695"
     CDS             complement(1247..1975)
                     /gene="mtgA"
                     /locus_tag="EYO87_12695"
                     /EC_number="2.4.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010400366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="monofunctional biosynthetic peptidoglycan
                     transglycosylase"
                     /protein_id="HIC66830.1"
                     /translation="MILRALIRPPAANPADPRPGGRRRWRPLRRLAVWMRWFALRVFV
                     LMAMLVGIYAFITPPTTLTIVGEARKRPITPRVWVDLGDVSPQMRRAVVAAEDANFCR
                     HWGFDMDEIRRVVASGSSRGASTISQQTAKNVFLWQGRSWPRKALETVFTPLIEAFWS
                     KRRILEVYLNLAEFGPGVFGIGAAAREFYGTTPDRLDAVQAARLAAVLPSPKTRDPRQ
                     ASARSRSIADGAATIRRDGRADCF"
BASE COUNT          351 a          742 c          667 g          322 t
ORIGIN      
        1 accggcgcgg tatcgacgaa aaccttgatc gcctcgtcct gatggcgcgt cagcatccag
       61 cgacccagcc gcttcagacg cttcttgacc agatcgtgat aatcccgccc ctgcgcatag
      121 acgctgatcg ccgcccggtc gcgcgcctcc agcacggcca gcggatcgtg atccggcgtg
      181 tagagatcgg ccagcatgac caccgaccgc gcctcgggcc acagggcggc cggatcgcct
      241 cgccaatggc tgcgctcggc catccagccc atctggccgt gccgcccggc ctgcaggaac
      301 gcacgcaaac ggcccgccgc ctcgggaatg gcatcgggtc gcgccacccg catcttggca
      361 aacccggcgg ccagcgcctc ggccgccagc gcctctttca tctgcgttgc cgaaataccc
      421 cggggggtcc ggggggccgg ccccccggcc gtcgcgggac gcaatcccgc atcggcttgc
      481 ctatccgaaa tcgagttcgg cataatgcgg ggccggctgg atgccgggca cctgatcggc
      541 caggacgccc cggaaggccg ggcgcgactt gatcgttgca taccagtccc gcaagacctc
      601 ggaccgatcc caatcgacgt ccgagatgta gtccaggcag gaaaaatgcg ccgcggctgt
      661 gaagtcggcc agagacatcg cgccccctgc cagccagcgg cggtcttcca gcagtccggc
      721 cagataatcc atgtgctcct tgatcgcgcg caggccatcc ttgaccgccc ggctgtccgg
      781 atagcccgaa cgcaggatct tcttccagac ccgctcgttc aggatgggct gggtgacttc
      841 gctgttgaac ttgtcgtcga accaggcgca aagccggcgc acctcgtgcc ggtccagcgc
      901 acccctgggc atcagcggcg attcggacac gacctcgtcg atatattcga cgatggcctg
      961 actttcggcc agcatggtac cgcggaaacg aaggaccggc agcttgccgg ccggattgcg
     1021 gcgcttcaga tcgggcggat tctcccagta tttctcctcg accagttcga cctcgatctt
     1081 cttttcggcc agaaccaggc ggaccttccg gcaaaagggc gacagggtcg aatgataaag
     1141 ccgcgtggtc tgcgtgttgg tgttcatcgg ctgctcggca ttcctcgtga cgatcggccg
     1201 tcttgatacg ccccgatacc cggtgtttca accacggcgg tcccggctag aagcaatccg
     1261 cccgcccatc gcggcgaatc gtggccgcac catcggcgat ggaccgcgac cgggccgagg
     1321 cttgccgcgg atcgcgcgtt ttgggcgagg gcaggaccgc cgccaaccgc gccgcctgaa
     1381 ccgcgtccag tcgatcgggc gtggtgccat agaattcgcg cgccgccgcc ccgataccaa
     1441 agacgcccgg tccgaattcg gccaggttca gatagacctc gaggatccgc cgcttggacc
     1501 agaaggcttc gatcagcggt gtgaagactg tctccagggc cttgcgcggc cagcttcggc
     1561 cctgccacag aaagacgttc ttcgcagtct gctggctgat cgtcgaggcc ccccggctgg
     1621 atcccgaggc cacgacgcgc cggatctcgt ccatgtcgaa accccagtgg cgacagaaat
     1681 tcgcatcctc ggcggcgacc acggcccgcc gcatctgggg cgatacgtcg cccagatcga
     1741 cccagacacg cggcgtgatc ggccgcttgc gcgcctcgcc gacgatggtc agggtcgtcg
     1801 gcggggtgat gaaggcatag atccccacca gcatcgccat cagcacgaac acgcgcagcg
     1861 cgaaccaccg catccacacc gccagccgcc gcagcgggcg ccagcggcgg cgcccgcccg
     1921 gccggggatc cgccggattc gcggcaggcg gtctgatgag ggcgcgcagg atcatgaggg
     1981 cggctttgtc acgccgcgcc tcgggccgtc aagcgcgggt tgcgcggatc aaccggcggg
     2041 cgacgccggc gggacgggcg gcacgccgcc gcccgacagc gc
//
LOCUS       DTVW01000974            2221 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2205702, whole
            genome shotgun sequence.
ACCESSION   DTVW01000974 DTVW01000000
VERSION     DTVW01000974.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2221)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2221)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2221
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2205702"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..534
                     /locus_tag="EYO87_12700"
     CDS             <1..534
                     /locus_tag="EYO87_12700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019962941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TOBE domain-containing protein"
                     /protein_id="HIC66831.1"
                     /translation="KVTAVGEMTGVALDGGGQAQVAIPTRPGDEGMEINLGVRPEDMR
                     ETDGTALFEGKVDLTEALGEVTLLYFGTQGGAVPIIAKLSGIHPGLKGSTVRLTADPQ
                     ALHLFHKGNSLLYRDGTDLPPYQPRTARAAGSMGGDRGAAAMPADRNGQDRNGGRDGE
                     DGDRIEDGLIKPEGPVR"
     gene            692..1552
                     /locus_tag="EYO87_12705"
     CDS             692..1552
                     /locus_tag="EYO87_12705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009817638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54-dependent Fis family transcriptional
                     regulator"
                     /protein_id="HIC66832.1"
                     /translation="MLKHGLDPGDARGPERLSLAELSARRQAMEHFLKVAAPQLDQLY
                     NLVCLSGCNVLLTDAAGVVLDQRVSDGDAAQFRDWGLWQGMDWSEAAQGTNGIGTCLA
                     EARQVTIHRDEHFRTRNTGMSCMDAPIWGPDGRLMAALDVSSARADQTERYNRLIGAQ
                     VAQTARAIEAVFFRASFPDARIVVASGDGTEATLLLAVDKDDLAIGATRAARRAMGLE
                     REGAIKPRPAADLLGREDDMQGFDRAERAAVTRALARAEGNVSAAARALGIGRATMYR
                     RMARLGLADR"
     gene            1749..>2221
                     /locus_tag="EYO87_12710"
     CDS             1749..>2221
                     /locus_tag="EYO87_12710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HIC66833.1"
                     /translation="MPNDQTHEFKGVGVLPFAKRYDNFIGGTWVAPKSGKYFMNTTPI
                     TGGEIGEIARSGAEDVEAALDAAHAARDKWGQTSVAERSNILNRIADRIESNLELLAT
                     AETWDNGKPIRETMAADLPLAVDHFRYFAGVLRAQEGGISEIDHDTVAYHFHEPLG"
BASE COUNT          385 a          729 c          788 g          319 t
ORIGIN      
        1 aaggtgacgg cggtcggcga gatgaccggc gtggcactgg acggcggcgg ccaggcgcag
       61 gtggcgatcc ccacgcgccc cggcgacgag gggatggaga tcaatctggg cgtccgcccc
      121 gaggacatgc gcgagaccga cggcaccgcc ctgttcgaag gcaaggtcga tctgaccgag
      181 gccctgggcg aggtgacgct gctttatttc ggcacccagg gcggtgcggt gccgatcatc
      241 gccaagctgt ccggcattca tccggggctg aagggcagca cggtgcggct gaccgccgat
      301 ccgcaggcgc tgcatctgtt tcacaagggc aattcgcttc tgtatcgcga cggcaccgac
      361 ctgccgccct atcagccgcg cacggcccgc gccgcaggca gcatgggcgg cgatcgcggc
      421 gcggccgcca tgccggcaga tcggaacgga caggaccgga acgggggcag ggacggggag
      481 gatggcgacc ggatcgagga cgggctgatc aagcccgagg gcccggtccg ctgattctgc
      541 gacgaaagtc gtaaatctcc gataccgcga tctgctatac tcgtcgcgat tggggggaat
      601 catggcgcat cgcagccacg cggatctggt ggccgagcag tcgcagtcga aatccgcgac
      661 ctcggcgctg gcggcatcct ggcgccgctc gctgctgaag catgggctgg atccgggcga
      721 tgcccgcggt cctgaacgcc tgagcctggc ggaattgtcg gcccggcgac aggcgatgga
      781 gcatttcctg aaagtcgcgg caccgcagct ggaccagctc tacaacctgg tctgcctgtc
      841 gggctgcaac gtgctgctga ccgatgcggc gggcgtggtg ctggatcagc gcgtcagcga
      901 tggcgatgcg gcgcaattcc gcgactgggg tctgtggcag ggcatggact ggtccgaggc
      961 cgcgcagggc accaacggca tcggcacctg cctggccgag gcgcggcagg tcaccatcca
     1021 tcgcgacgaa catttccgca cccgcaatac cgggatgtcc tgcatggatg cgccgatctg
     1081 ggggccggac ggacggctga tggcggccct ggatgtcagt tccgcccgcg ccgaccagac
     1141 cgaacgctac aaccgcctga tcggtgcgca ggtggcccag accgcgcggg cgatcgaagc
     1201 ggtgttcttt cgcgcctcgt tcccggatgc gcggatcgtc gtcgcctcgg gcgacggaac
     1261 cgaggcgacg ctgcttctgg cggtggacaa ggacgacctg gccatcggcg cgacccgcgc
     1321 cgcgcggcgc gccatggggc tggaacgcga aggcgccatc aagccgcgcc ccgccgccga
     1381 tcttctgggc cgcgaggatg acatgcaggg tttcgaccgg gccgaacgag ccgccgtgac
     1441 gcgggccctg gcgcgggccg agggcaacgt ctcggccgcc gcgcgcgccc tggggatcgg
     1501 acgggcgacg atgtatcggc gcatggcgcg gctgggtctg gcggacagat agccggcgcc
     1561 ggagaacgtc atcggcgcgg ccggcccggc gcggggcgtg ccgccgtcga taagttccga
     1621 cacctgtctc acccgcgaga caggttcacg cgatggcgat cccgcctgcg ttgaatcgaa
     1681 tcctcagtat cccaaactgt gacccaggcc cggtcaggaa atgccgggac gagaggagga
     1741 tcaagacaat gccgaacgac cagacgcacg aattcaaggg cgtgggcgtg ctgccctttg
     1801 ccaaacgcta tgacaacttc atcggcggca cctgggtggc gccgaaatcg ggcaagtatt
     1861 tcatgaacac gacgcccatc accggaggcg agatcggcga gatcgcccga tccggtgccg
     1921 aggatgtcga ggccgccctg gacgccgccc acgccgcccg ggacaagtgg ggccagacct
     1981 cggtcgccga acggtccaac atcctcaaca ggatcgccga ccggatcgaa tccaatctgg
     2041 aactgctggc caccgccgag acctgggaca atggcaagcc catccgcgag acgatggccg
     2101 cggacctgcc gctggcggtc gatcacttcc gctacttcgc gggcgtcctg cgcgcgcagg
     2161 aaggcggcat ttccgagatc gaccatgata ccgtcgccta tcacttccac gagccgctgg
     2221 g
//
LOCUS       DTVW01000975            1122 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2205812, whole
            genome shotgun sequence.
ACCESSION   DTVW01000975 DTVW01000000
VERSION     DTVW01000975.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1122)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1122)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1122
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2205812"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..321
                     /locus_tag="EYO87_12715"
     CDS             <1..321
                     /locus_tag="EYO87_12715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_354044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="crotonyl-CoA carboxylase/reductase"
                     /protein_id="HIC66834.1"
                     /translation="KGGMVVICAGTTGFNCTFDVRYLWMHQKRIQGSHFAHLKQASAA
                     NRLMLERRLDPCMSEVFPWAEIPAAHMKMYRNQHKPGNMSVLVQAPRTGLRTFEDALE
                     AGRR"
     gene            complement(343..546)
                     /locus_tag="EYO87_12720"
     CDS             complement(343..546)
                     /locus_tag="EYO87_12720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005863995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66835.1"
                     /translation="MIELLFVTCLSADPQSCRERSLPFIDMGVTACMIHGQQELARWG
                     ERHPRETVREWKCRPARLREVKA"
     gene            complement(724..930)
                     /locus_tag="EYO87_12725"
     CDS             complement(724..930)
                     /locus_tag="EYO87_12725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007802616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66836.1"
                     /translation="MIELFFVTCLIDDPQVCTDHSLLFEERNGLFTCMLEGQSELARW
                     VEAHPRDRVKEWKCRRPRQGETAL"
BASE COUNT          201 a          379 c          350 g          192 t
ORIGIN      
        1 aagggcggca tggtggtgat ctgcgccggt accaccgggt tcaactgcac cttcgacgtg
       61 cgctatctgt ggatgcacca gaagcgcatc cagggatcgc atttcgcgca tctgaaacag
      121 gccagcgccg ccaacaggct gatgctggaa cgccgcctcg acccctgcat gtccgaagtt
      181 ttcccctggg ccgagattcc ggccgcgcac atgaagatgt atcgcaacca gcacaagccg
      241 ggaaacatgt cggtcctggt gcaggcgcca agaaccggcc tgcgcacgtt cgaggacgcg
      301 ctggaagccg gtcggcgcta gacatgcgcc gcctttgcgg gatcacgcct tgacctcgcg
      361 cagcctggcc gggcggcatt tccattcgcg caccgtctcg cggggatggc gttcgcccca
      421 cctggccagt tcctgctgac catgaatcat gcaggccgtc acgcccatgt cgatgaacgg
      481 aagactgcgc tcccggcagg attgcggatc cgccgaaagg caggtgacaa acagcaattc
      541 gatcatctcg ggtccatcct tttacccggt tcctccccgg ttcggatccc ttcgacgatc
      601 aggatagcgg ttgattcgaa aagcagcgtc agcgccgcgt gaatccgggt tcgggcgggc
      661 cccttgcagc gtgacagggc cggccgggcg cgggcttcgg cgcggcgcgc ggccatcgcg
      721 gacctaaagc gcggtttcgc cctgacgggg gcgccggcat ttccactctt tcacgcggtc
      781 gcggggatgc gcctcgaccc agcgggccag ttcgctctgg ccctccagca tgcaggtgaa
      841 cagcccgttc ctttcctcga acagcaggct gtgatcggtg cagacctgcg ggtcgtcgat
      901 caggcaggtc acgaagaaca attcgatcat gggcattcct ccctcgaggc catcatagac
      961 cctcacgggc gacatgccca aaaagttgcg gaccatcccg ccgaaccgac gatcccgccg
     1021 cagccgggac gggatgcgga tcgccggacg cggcaatgat tgtgggcttt cgcgccgcgc
     1081 cgcgatacac cggaatcatg accgccgcca ccgcctcgcc cg
//
LOCUS       DTVW01000976            1456 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2207100, whole
            genome shotgun sequence.
ACCESSION   DTVW01000976 DTVW01000000
VERSION     DTVW01000976.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1456)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1456)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1456
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2207100"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..796)
                     /locus_tag="EYO87_12730"
     CDS             complement(<1..796)
                     /locus_tag="EYO87_12730"
                     /EC_number="3.5.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_353381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urease subunit alpha"
                     /protein_id="HIC66837.1"
                     /translation="MEQTLSRADYAAMYGPTTGDRIRLADTQLLIEVERDLTIPGEEV
                     KFGGGKVVRDGMGQSQITRAGGAVDTVITGVVVFDHQGIVKADVGLKDGRIAAIGKAG
                     NPDTQPGVTIIIGPGTEIIAGEGKIVTPGGFDCHIHYICPQQVDHALHSGITTLLGGG
                     TGPAHGTLATTCTPGPWHIARMLEAVSDLPVNIGIAGKGNASLSAPLEEQVRAGACAL
                     KLHEDWGTTPAAIDNCLSVADRMDVQVMIHTDTLNESGFVDDTLRAM"
     gene            complement(798..1103)
                     /locus_tag="EYO87_12735"
     CDS             complement(798..1103)
                     /locus_tag="EYO87_12735"
                     /EC_number="3.5.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005860628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urease subunit beta"
                     /protein_id="HIC66838.1"
                     /translation="MVPGEILVAAGEIVLNEGRDPVAIMVANTGDRPIQVGSHYHFAE
                     TNPALDFDRRAARGMRLAIPAGTAIRFEPGQSREVSLIPYAGKRVVQGFRQDIMGAL"
     gene            complement(1108..>1456)
                     /locus_tag="EYO87_12740"
     CDS             complement(1108..>1456)
                     /locus_tag="EYO87_12740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011747533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="urease accessory protein"
                     /protein_id="HIC66839.1"
                     /translation="VAGGVAGHAGFGFPGVEPMILASVVVLGALVAMAARPPLAVLLP
                     GAALFGFTHGWAHGAEAPAEGLIAYAAGFALMTSALHLAGIQAGRLIRTGALLRGLGG
                     GTAVAGLMLAFGV"
BASE COUNT          235 a          507 c          481 g          233 t
ORIGIN      
        1 tcatggcgcg cagggtgtcg tcgacgaagc cggattcgtt cagcgtgtcg gtgtggatca
       61 tcacctgcac atccatccgg tcggcgaccg acaggcaatt gtcgatggcg gccggggtgg
      121 tgccccaatc ctcgtgcagc ttcagcgcgc aggccccggc gcggacctgt tcttccagcg
      181 gtgcggacag gctggcattg cccttgcccg caatgccgat attgaccggc agatcggaca
      241 cggcctccag catccgggcg atgtgccacg gtccgggcgt gcaggtggtg gccagcgtgc
      301 catgcgccgg tccggtgccg ccgcccagca acgtggtgat cccggaatgc agggcgtgat
      361 cgacctgttg cggacagata taatggatgt ggcagtcgaa accgccgggc gtcacgatct
      421 tgccctcgcc cgcgatgatc tcggttccgg gtccgatgat gatggtcacg ccgggctggg
      481 tgtcggggtt gcccgccttg ccgatggcgg cgatgcggcc gtccttcagc ccgacatcgg
      541 ccttgacgat accctgatgg tcgaagacca cgacgccggt gatgacggta tcgaccgcgc
      601 cgcccgcgcg ggtgatctgg ctttgcccca tgccgtcgcg gacgaccttg ccgccgccga
      661 atttcacctc ttctccgggg atggtcaggt cgcgctcgac ctcgatcagc agctgggtat
      721 cggccaggcg gatgcggtcg ccggtggtcg ggccatacat cgccgcgtag tcggcgcggg
      781 acagggtctg ctccatgcta cagtgccccc atgatatcct ggcggaagcc ctgcaccacg
      841 cgcttgccgg cataggggat caggctgacc tcgcgcgact ggccgggttc gaaccggatg
      901 gcggttccgg ccgggattgc aaggcgcatc ccgcgtgccg cccgacggtc gaaatccagc
      961 gccgggtttg tctcggcaaa gtggtagtgg ctgccgacct ggatcgggcg atcgccggta
     1021 ttggcgacca tgatcgccac cggatcgcgg ccctcgttca acacgatctc gcccgctgcg
     1081 acgaggattt cgcccggcac catcatccta aactccgaaa gccagcatca ggccggccac
     1141 ggccgttccg ccgcccagac cgcgcagcaa cgcgcctgtc cggatcagcc tgcccgcctg
     1201 aatacccgcc aaatgcagcg ccgatgtcat cagcgcgaaa ccggccgcat aggcgatcag
     1261 gccctcggcc ggcgcctcgg cgccatgcgc ccagccatgg gtgaagccga acagcgcagc
     1321 gcccggcagc agaaccgcca gcggcggcct tgcagccatc gccacgagcg cgcccagaac
     1381 cacgaccgag gcaaggatca tcggctcgac ccccggaaag ccgaagccgg catggcccgc
     1441 cacgccgcct gcgacc
//
LOCUS       DTVW01000977            1341 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2207290, whole
            genome shotgun sequence.
ACCESSION   DTVW01000977 DTVW01000000
VERSION     DTVW01000977.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1341)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1341)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1341
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2207290"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..242
                     /locus_tag="EYO87_12745"
     CDS             <1..242
                     /locus_tag="EYO87_12745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008885420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="FCD domain-containing protein"
                     /protein_id="HIC66840.1"
                     /translation="VLRQTLCNLNDRIHLIRWIAMEGRRQGTQAEHRRILDHMQARDD
                     RAAMAGMREHILHRNEDILAAIKAAYGHVYTLSTG"
     gene            435..1160
                     /locus_tag="EYO87_12750"
                     /pseudo
     CDS             435..1160
                     /locus_tag="EYO87_12750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007799719.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
BASE COUNT          262 a          415 c          407 g          257 t
ORIGIN      
        1 aggtgctgcg acagaccctc tgcaacctca acgaccgtat tcaccttatc cgctggatcg
       61 ccatggaagg ccggcgtcag ggcacacagg ccgaacaccg ccggatcctc gaccatatgc
      121 aggcccgcga tgaccgggcg gcgatggcag gaatgagaga acacattctg catcgcaacg
      181 aagacatcct tgccgcgatc aaggcggcct acgggcatgt ctacacgctt tcgaccggct
      241 agcgcagccg gcccggcaag atgggatccg ccgcccgagg gggacgatac gcatgacatc
      301 agagcatccc ccggcgccat gcccgcagat ggcggcttga cccgatgaaa ccggctgtgc
      361 atggtgtctt gtagacatag atgtatacaa aaaaggcttc aagcggcgcg gcgggtggaa
      421 gcggagggac ggtcctggac aacaagctga atggtgccga ggcgatggtc cggatgcttc
      481 aggcccacga tgtcaggcac atcttcggat tatgcggcga taccagcctg ccgttctatg
      541 acgcgatgca tctgcttgac cacgatatcg aacatgtcct gacccgcgac gaacgcagcg
      601 cggggtacat ggccgatggc tattcccggg tgacgggccg ccccggcatc tgcgaaggtc
      661 catcgggcgg cggcgccacc tatatcctgc cgggactgat cgaatcttcc gaaagctcca
      721 tcgcgacgct ggccatcacc agcgatattt cggtctcgac ctacggcaga tacccgctga
      781 ccgaagtgga tcaggaggcc ctgatgcgcc ccctgaccaa gtggaatacc gtcatccgga
      841 aggccgaaca catcccccgc atggtccggg cggcgtttcg tgcgatgacg acgggccggc
      901 cgggtgcggc gcatctgggt ttgccctatg atattcaata cgatccggtg gattcgtcgg
      961 acatctgggc ggatcgcggg cttgcgacct atcccgccta tcgcaccggt cccgaggccg
     1021 aggccgtcga agcggcggtg gatgcaatcc tttcggcccg caaaccgctg atcgtctgcg
     1081 gcggtggcgt tgtcgtttcc ggcgcgatgg acgaactgga ccgtcttgcg gggcgtctgg
     1141 acatcgccgt ggccacgtcg acgcgcgagc cggccgtgcc atcggcgttg acaacgttcc
     1201 cgccgattac cgcgccgcgt catcgcttgc cgtccccagc gggccagcat ttctcggtcg
     1261 cacatcgttc gtcactcctc tgtcgaactt agtatatcat tgtattattg tatatatgat
     1321 tatataataa tattctatta t
//
LOCUS       DTVW01000978            1889 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2207392, whole
            genome shotgun sequence.
ACCESSION   DTVW01000978 DTVW01000000
VERSION     DTVW01000978.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1889)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1889)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1889
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2207392"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..339)
                     /locus_tag="EYO87_12755"
     CDS             complement(<1..339)
                     /locus_tag="EYO87_12755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014880758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66841.1"
                     /translation="MHHDINDLRRFYYQRSLGRVVQRILRDRLTDRWPPERCAAMTVA
                     GFGFAAPMLRPYLAGARRVMALMPGPQGVMGWPAGMPNHSVLCDETAWPVETGSIDRL
                     VMLHGLETSDH"
     gene            397..1143
                     /gene="gloB"
                     /locus_tag="EYO87_12760"
     CDS             397..1143
                     /gene="gloB"
                     /locus_tag="EYO87_12760"
                     /EC_number="3.1.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010396057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyacylglutathione hydrolase"
                     /protein_id="HIC66842.1"
                     /translation="MPLELITLRCLRDNYAYLVHGAAGTALIDAPEAMPVLTELEARG
                     WGLDAILLTHHHDDHVQAVTEIVARTGARVIGHAADAGRLPPLDVRATPGVPLEILGE
                     PVEVIDVSGHTIGHVAFHLPQSKLAFTADSLMALGCGRLFEGDAPTMWDSLSRLNALP
                     GDTLICSGHDYCAANGAFALSVDPENQALKDRLTAVDEARQPCSPATLQEERATNPFL
                     RVDALRGGLGMQGASDCEVFARLRKMKDAF"
     gene            1359..>1889
                     /gene="clpA"
                     /locus_tag="EYO87_12765"
     CDS             1359..>1889
                     /gene="clpA"
                     /locus_tag="EYO87_12765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352348.1"
                     /note="ATPase and specificity subunit of the ClpA-ClpP ATP
                     dependent serine protease; directs protease to specific
                     substrates; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpA"
                     /protein_id="HIC66843.1"
                     /translation="MPSFSTSLEQAIHQALALANEHRHELATLEHLLLALTEEPEAVK
                     VMRACNVDLEELRKLLIDFIEDDLSTLITDIEGSEAVPTAAFQRVIQRAAIHVQSSGR
                     QEVTGANVLVAIFAERESNAAFFLQEMDMTRYDAVNFIAHGVAKNPSFSEPRKVAGSD
                     EPVEQKQAEKAQEARDE"
BASE COUNT          351 a          622 c          596 g          320 t
ORIGIN      
        1 atggtcgctg gtctccagtc cgtgcagcat caccagccgg tcgatgctgc cggtctcgac
       61 cggccaggcg gtctcatcgc acagcacgct gtggttgggc atccccgcgg gccaacccat
      121 cacaccctgc ggccccggca tcagcgccat cacccggcgc gccccggcca gatagggccg
      181 aagcatcggc gcggcgaagc caaagccagc cacggtcatc gccgcgcagc gttccggcgg
      241 ccagcggtcc gtcagccggt cgcgcaggat ccgctgcacc acccggccca gcgaccgttg
      301 ataatagaac cggcgtagat cgttgatgtc gtgatgcatt gcgccccggc ccggcttcgg
      361 tcacgctgag cacagcacag aggaagggat ttgccaatgc cgctggaact gatcaccttg
      421 cgctgcctgc gcgacaacta cgcctatctc gtccatggcg ccgccggcac cgccctgatc
      481 gacgcgcccg aggcgatgcc ggtgctgacc gagcttgagg cgcgcggttg gggactggat
      541 gccatcctgc tgactcatca tcacgacgat cacgttcagg ccgtgaccga gatcgtggcc
      601 cggaccggcg ccagggtcat cggccatgct gcggatgccg gccgcctgcc gccgctggat
      661 gtccgtgcca cgccgggcgt gccgctggag attctgggcg aaccggtcga ggtcatcgac
      721 gtttcgggtc acacgatcgg ccatgtcgcc ttccaccttc cgcaatccaa actggccttc
      781 accgccgaca gcctgatggc acttggctgt ggacgcctgt tcgagggcga tgcgccgacg
      841 atgtgggaca gtctgtcccg gctgaacgcc ctgccgggcg acacgctgat ctgttcgggc
      901 catgattatt gcgccgcgaa cggcgccttc gcattgtcgg tcgatcctga aaaccaggcg
      961 ttgaaggatc gcctgaccgc cgtggacgag gcccgccagc cctgttcgcc cgccaccctt
     1021 caggaagagc gcgcgaccaa tccgttcctg cgcgtcgatg cgctgcgcgg ggggctgggc
     1081 atgcagggcg cttcggattg cgaggtcttc gcgcggctgc gcaagatgaa ggacgcgttt
     1141 tgagcgggcc ggaaccgagg cgtggcggcg ggcgtcttgt cttgaaaaac ggacgccgcg
     1201 gcatcacatc tgcctcaccc aaggcaaaat cgcggcatat tggagaaaaa cctcttgatg
     1261 ccgcgcaaaa tccaccaaaa attaactgca tcgtgacagt ctgggcaggt gggtctttcg
     1321 atgcgcccat accgccagcc gactgacagg agacgaccgt gccaagtttc tcgacctccc
     1381 tggaacaggc cattcatcaa gccctcgcgc tggccaatga acatcgccac gaacttgcaa
     1441 cgctggaaca tctgttgctg gcgctgaccg aggaacccga ggcggtcaag gtcatgcggg
     1501 cctgcaacgt cgatctggaa gaactgcgca agttgctgat cgacttcatc gaggatgatc
     1561 tctcgacgct gatcaccgat atcgaaggtt ccgaggcggt gccgaccgct gccttccagc
     1621 gcgtgatcca gcgcgccgcg attcatgtcc agagctcggg ccggcaagag gtcacgggtg
     1681 cgaatgtgct ggtggcgatc ttcgccgaac gcgaatccaa cgcggccttc ttcttgcagg
     1741 aaatggacat gacccgttac gacgcggtca acttcatcgc ccatggggtc gccaagaacc
     1801 cctcgttcag cgaaccgcgc aaggtcgcag gctcggacga gccggtcgag cagaagcagg
     1861 ccgaaaaggc acaggaggcc agggacgaa
//
LOCUS       DTVW01000979            2798 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2208472, whole
            genome shotgun sequence.
ACCESSION   DTVW01000979 DTVW01000000
VERSION     DTVW01000979.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2798)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2798)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2798
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2208472"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1938)
                     /locus_tag="EYO87_12770"
     CDS             complement(<1..1938)
                     /locus_tag="EYO87_12770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl transferase"
                     /protein_id="HIC66844.1"
                     /translation="MKRPTGTPKRTGKSPVADKRSSPKAAAASKSAVRRHKPNQRKRG
                     NVVVRAVAGTVWLFWRILWGSFWRLTMVVLLIIGGASAYYYAGLPDAKELFDARARGS
                     VTMLDREGRVFAWRGETFGTVTGEKTAPVLRDAVVATEDRRFYSHLGVSPRGIAGAIR
                     INLAEGRGPLEGNGGSTITQQVAKLLCLGETFDPIRWKNEAEFEASCRVGSLWRKVKE
                     VPFAFALEAKYSKQDILNIYMNRSYLGAGARGFEAASERYFNKPATDVTPAEAAMLAG
                     LLKAPSYFAPTADLERSQGRADVILDLMKQQGYLNDKQYAEAKANPAVLSKAAQARAG
                     GYFADWVMDSGPGFLTSETTDDITIKTTFDQDIQRAAERALKRIFDEKLGGNSKAEAA
                     VVVMSADGAVRAMIGGRDNTVNGAFNRAIQAKRQTGSSFKPFVYAAALEAGYSPSDII
                     EDGPITIRIPGGKNWSPKNYTRRFYGNVTLETALKNSLNTATVRLQEIVGRDAVRRVA
                     SDFGIVSNLTTSPSLALGASEATLLELTGAYAGIRNGGTSVAPYGLVELSIKGDDQPL
                     MGQLGGLGQRVISPRAAGQLIYMMQQVIDSGTGKRAKLGSRPAAGKTGTTSSYRDAWF
                     VGFTEQYVVGVWMGYDDNTPLK"
     gene            2338..>2798
                     /locus_tag="EYO87_12775"
     CDS             2338..>2798
                     /locus_tag="EYO87_12775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005631751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66845.1"
                     /translation="MKKSLPLIATLASLAALPAVAQDAAPAEVAAAVSADVVYIFNTL
                     LFLIGGFLVMWMAAGFAMLEAGLVRSKNVTTQLFKNIALFGIAGIMYWLIGYNLMYPG
                     DWTVPGVVGEIFSPKTIDPVGAGQRVGVQVAFREAGNRSAGVAIEHAPGAVA"
BASE COUNT          457 a          920 c          903 g          518 t
ORIGIN      
        1 cttcagcggc gtgttgtcgt catagcccat ccagacgccg acgacatatt gttcggtaaa
       61 gccaacgaac caggcgtcgc ggtagctgct ggtcgtgccg gtctttccgg cggccgggcg
      121 cgagcccagc ttggcccgct tgccggtgcc cgaatcgatc acctgctgca tcatgtagat
      181 cagctgaccg gccgcgcgcg ggctgatcac ccgctggccc aggccgccca gctgccccat
      241 cagcggctgg tcgtcgccct tgatggacaa ttcgaccagg ccatagggcg cgaccgaggt
      301 gccgccattg cggatcccgg cataggcacc ggtcagttcc agcagcgtgg cctcggaggc
      361 gccaagggcc agcgaggggc ttgtggtcag gttgctgacg atgccgaaat cactggccac
      421 ccggcgcacc gcatcgcgtc ccacgatctc ttgcaggcgg accgtcgcgg tgttcagcga
      481 gttcttcagc gccgtctcca gcgtcacgtt accatagaag cggcgggtat agttctttgg
      541 cgaccagttt tttccgccgg ggatgcggat cgtgatcggc ccgtcctcaa tgatgtccga
      601 gggcgaatat cccgcctcca gcgccgcggc atagacgaag ggcttgaaac tggacccggt
      661 ctgccgcttg gcctggatgg cgcggttgaa ggccccgttc acggtgttgt cgcgaccgcc
      721 gatcatcgcg cgcaccgcgc catcggcgga catcaccacg acggcggcct cggccttgct
      781 gttgccgccc agcttctcgt cgaaaatccg tttcagtgcg cgttcggccg cccgctggat
      841 gtcctgatcg aaggtggtct tgatggtaat gtcgtcggtc gtctcgctgg tcaggaaacc
      901 ggggcccgaa tccatgaccc aatcggcgaa atagccgccc gcgcgggcct gcgccgcctt
      961 ggacaggacc gccggattcg ccttggcttc ggcatattgc ttgtcgttca gatagccctg
     1021 ctgtttcatc agatccagga tcacatcggc ccgaccctgg ctgcgttcca gatcggcggt
     1081 cggcgcgaaa tagctgggag ccttgagcag cccggccagc atcgcggcct cggccggggt
     1141 cacatcggtt gcgggcttgt tgaaataccg ctcgctcgcc gcctcgaagc cgcgcgcgcc
     1201 ggcccccaga taggaccggt tcatgtagat gttgaggatg tcttgcttgg aatacttggc
     1261 ctccagcgcg aaggcgaagg ggacctcctt gaccttgcgc cacaggctgc cgacgcggca
     1321 gctggcctcg aattcggcct cgttcttcca gcggatcgga tcgaatgtct cgccgaggca
     1381 caaaagcttg gccacctgct gggtaatggt cgaaccgcca ttgccttcca gcggaccgcg
     1441 gccttcggca aggttgatcc ggatcgcgcc cgcgataccc cgcgggctga cgcccagatg
     1501 gctgtagaat cgacggtcct cggtcgcgac caccgcatcg cgcaggaccg gggcggtttt
     1561 ctcgccggtg acggtgccga atgtctcgcc ccgccaggca aagacgcggc cctcgcgatc
     1621 cagcatggtg accgatccgc gcgcacgcgc gtcgaacaat tccttcgcgt cgggcaggcc
     1681 cgcataataa taggccgagg ccccgccgat gatcagcaga accaccatcg tcagccgcca
     1741 gaacgaaccc cacaggatgc gccagaacag ccagaccgtg cccgcgacgg cccgcacgac
     1801 gacattgccc cgcttgcgct ggttcggctt gtgccggcgc acggccgatt tcgaggccgc
     1861 tgcggccttg ggagaactgc gcttgtcggc aacagggctt ttgcccgtgc gcttcggggt
     1921 gccggtcggt cgtttcatgt ggtccagatg cctgcttgac tgccctgccg gttctttctc
     1981 cggccaagtt ggccatcagc atacagcaag aatcgggcag agggaattct cctgaccaat
     2041 ccgtgaaggg gcggtgtctt gccgccgaaa gcccggctcg tccgggaact tgccgcgacc
     2101 gccgcctgac gcggcaaaat ccgcgaacat gcacaggtga cgggcagcgg gccacggcgc
     2161 cgaacgcaat ctgcccgttt cttgggcctt gggcagccgg caacgccaat tttgaggcag
     2221 ccgatatttc tgccggcgcc gggcagcgcg ccgccttgtg ccgaagcccc ggaatttccg
     2281 atcaaaggcc ggatggcagc ccgtccggcg gctgcggcac ggaagtgagg taaacagatg
     2341 aaaaagtccc tcccgctcat cgcgacgctt gcgtccctgg cagccctgcc tgccgtggcg
     2401 caggatgcgg ccccggccga ggtggcggcc gcggtcagcg cggacgtcgt ctacatcttc
     2461 aacacgctgc tgtttctgat cggcggtttt ctggtcatgt ggatggcggc cggctttgcc
     2521 atgcttgaag ccgggctggt ccgatccaag aacgtgacca cccagctttt caagaacatc
     2581 gcgctgttcg gcatcgcggg catcatgtac tggctgatcg gctataacct gatgtatccc
     2641 ggcgactgga ccgtgccggg cgtcgtcggt gaaatcttca gccccaagac catcgatccg
     2701 gtcggggcag ggcagcgggt aggcgtgcag gtcgcgttcc gggaagccgg caatcgcagc
     2761 gcgggtgttg cgatagagca cgcgcccggt gccgtggc
//
LOCUS       DTVW01000980            1460 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2209841, whole
            genome shotgun sequence.
ACCESSION   DTVW01000980 DTVW01000000
VERSION     DTVW01000980.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1460)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1460)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1460
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2209841"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            305..991
                     /locus_tag="EYO87_12780"
     CDS             305..991
                     /locus_tag="EYO87_12780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009820179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66846.1"
                     /translation="MCLSQTVSFTASAFLVVGGGHAVTRAWAINPRYLPVALMPVFAG
                     LQQFMEGNVWWGVNTGDPGATLLGALGFIFFTWFMWPFWIPLASWVLEPPGSRRRPWM
                     AAMSVAGLAFGLALYVPHLLNPGWIEVTVNQGSLAYEGTMLLDYLMPRWMTYAIYLFL
                     IIVPPAISTYLHMRWFALTIVAVVVVDILFLRYAYISFFCLLAGLGTLHLIYIIARNK
                     CARECPVLFA"
     gene            1027..>1460
                     /locus_tag="EYO87_12785"
     CDS             1027..>1460
                     /locus_tag="EYO87_12785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008282895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66847.1"
                     /translation="MDQSGNLVRDHASRDHARLERTLITSRKAFLGFLMKRLGNRPDA
                     EDVLQEFCIRVLARRDQLREAERMDAWLYAVLRSTLNDHFRKAGRARRLDSAMALEAK
                     SAVVIEDGVEGMDVLCQCVKGLLGELRPADADLIRRIDIDET"
BASE COUNT          232 a          445 c          479 g          304 t
ORIGIN      
        1 aggggaagga tatgatatcc accgaccgtc acttttaccc ggttcttaca aaagtgacag
       61 ctttgccggc atccttgacc gggcaatgcc ggttcggcgg acttgatcgg tggccggatc
      121 cgcacgagcc aatcttgaag acgcggctgg ggatcaaggg cgcggccggc ccgagggcga
      181 tccgccgttt gcacgtcatc gcgccgggcc gccgcccgaa ggcacggcag gcgcagtggc
      241 aatcgccgca aggcctgcta ccgtgaacgg gcgttgcgcg acccgtcacg gagagatttt
      301 cgccatgtgc ctttcccaga ccgtcagctt tactgccagc gcctttctcg tggtgggtgg
      361 cggtcatgcc gtcacgcgcg cctgggcgat caatccgcgg tatctgccgg tggcgctgat
      421 gccggtcttt gccggacttc agcaattcat ggagggcaac gtctggtggg gggtgaatac
      481 cggcgatccg ggcgcgaccc tgctgggggc actggggttc atcttcttca cctggttcat
      541 gtggccgttc tggatcccgc tggcctcctg ggtgctggag ccgcccggca gccggcgccg
      601 gccctggatg gctgcgatgt cggtcgcggg gcttgccttc ggactggcgc tctatgtgcc
      661 gcatctgctc aatcccggct ggatcgaggt gacggtcaat cagggttcgc tggcctacga
      721 aggcaccatg ctgcttgact acctgatgcc gcgctggatg acctatgcga tctacctttt
      781 cctgatcatc gtgccgccgg cgatctcgac ctatctgcac atgcgctggt tcgcgctgac
      841 catcgtcgcg gtggtcgtgg tggacatcct gttcctgcgc tatgcctata tctcgttttt
      901 ctgccttttg gccggtcttg gcaccctgca tttgatctac atcatagcgc gaaataaatg
      961 cgcgcgcgaa tgtcctgtcc tgttcgcata gccggttttc cagccgcgcg agaaaggaga
     1021 gcgatcatgg accaatccgg aaacctcgtt cgcgaccatg ccagccgtga ccacgcgcgg
     1081 ctggagcgga cgctgatcac cagccgaaag gcgtttctgg gcttcctgat gaagcgattg
     1141 ggcaaccgcc cggatgccga ggatgtcctg caggaattct gcatccgggt tcttgcgcgt
     1201 cgggatcaat tgcgcgaggc cgagcggatg gacgcctggc tctatgcggt gctgcgctcg
     1261 accctcaatg atcacttccg gaaggcgggc cgggcaaggc gcctcgacag cgcgatggcg
     1321 ctggaggcca aatcggccgt ggtgatcgag gatggcgtcg aggggatgga tgtcctctgc
     1381 caatgcgtca aggggctgct gggcgagctg cgcccggccg acgccgatct gatccggcgc
     1441 atcgacatcg acgagaccca
//
LOCUS       DTVW01000981            4291 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2210015, whole
            genome shotgun sequence.
ACCESSION   DTVW01000981 DTVW01000000
VERSION     DTVW01000981.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 4291)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4291)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4291
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2210015"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..643
                     /locus_tag="EYO87_12790"
     CDS             <1..643
                     /locus_tag="EYO87_12790"
                     /inference="COORDINATES: protein motif:HMM:PF00501.26"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HIC66848.1"
                     /translation="LGVVCNEFYGMTEVNHLIGNCSRLYPRRPGSMGVAYPGHDVRLV
                     DAEGIEVADGEPGEIVTPATSPTRFLGYLNNAGKEAELRLGDWLRTHDLAVRDADGYF
                     WYKGRSDDLIKSSGFRIGPTEIEECLLSHPAVAEAGVIGKPDAQRGTIVKAFVRLASG
                     FIGDASLTEELRAHVRNKLASYKAPREIDYVDEFPMTSSGKINRKALRQAEGN"
     gene            694..1530
                     /locus_tag="EYO87_12795"
     CDS             694..1530
                     /locus_tag="EYO87_12795"
                     /inference="COORDINATES: protein motif:HMM:PF01261.22"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate isomerase/epimerase"
                     /protein_id="HIC66849.1"
                     /translation="MKFGVHAGLWMKAWQDDPLPILDIAADLGFDGVELSLLGIGMDR
                     ASGIGKAAAARGLDLTCSTGLGAEADPTSPQVAVRERAVAVLTEAVEITAALGARSLA
                     GVVAAPWGVFAPGASDRADRSARTLARIEPVLAQNGVTLGIEAVNRFETDLTSTAADA
                     TAIARATGAAHVGVLLDTFHMNIEEKDPAAAIRATGDALVHFHVSDNDRGVPGSGHFD
                     FEHCATALSDIGYDGWITAEMFVMPSNPNSADVKVWRAIEPDPTEAARQTLDFMQRVF
                     AR"
     gene            1527..2072
                     /locus_tag="EYO87_12800"
     CDS             1527..2072
                     /locus_tag="EYO87_12800"
                     /inference="COORDINATES: protein motif:HMM:PF02734.15"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DAK2 domain-containing protein"
                     /protein_id="HIC66850.1"
                     /translation="MTGPEFFLALQARIAVHADALNRLDAALGDGDHGATMLRGLTRA
                     AQADRGAQAKAFMRASGGASGTLFGLILIEIERHLNENAALGEGLQRACERIKDLGQV
                     TTGDKSMIDALAPAAHALAEGTVQDAVDAAVAGRDRTRDLSARRGRAQYVENGGRGHV
                     DPGAVSVVIILETLAGKESAL"
     gene            2069..3100
                     /locus_tag="EYO87_12805"
     CDS             2069..3100
                     /locus_tag="EYO87_12805"
                     /inference="COORDINATES: protein motif:HMM:PF02733.15"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxyacetone kinase subunit DhaK"
                     /protein_id="HIC66851.1"
                     /translation="MKKLMNAAESIVDDMIDGYVSAFEQVVRGHQDPRIVVRAKGRKD
                     PDRKVTLLIGNGSGHEPIAMGFVGAGLLDANVVGDVFAAPSADLILDGIREVSGKAGC
                     ILLISQHSGDMINGRAAVMLAEEERLRVRALPMYDDISSAPRDRIQDRRGAPGTMFIY
                     KILGAAAEAGMPLDDLMTLGRAVRARTVTLAAALSPGISPLTGQPMFDLPDDEIYLGM
                     GVHGEPGIGRTGVGPVRDLVTLIVDKLLGDYPIASGGQAAVIVNGMGGTTLMELLTVW
                     NETRNALAARGIAAVAPMIGSFVTTQEMGGFSISLLEPAGDMLRLWTAPSDTPFFPSI
                     RHAEKEKSQ"
     gene            3121..4017
                     /locus_tag="EYO87_12810"
     CDS             3121..4017
                     /locus_tag="EYO87_12810"
                     /inference="COORDINATES: protein motif:HMM:PRK12858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tagatose 1,6-diphosphate aldolase"
                     /protein_id="HIC66852.1"
                     /translation="MRPIRGVAVDQGSGLARMLRQARGAKAGKGDLLLFKRLVAEQLS
                     PEASTLLVDANYGRELLPSIAPGCESMLAYEADVYRIADEDRMTVLPEDLRIADYPGL
                     GVRVLKFFLYFAPNDPTPINAQKFERVRRIGAECREHGITFLFEPIVYDRAVPDEDGA
                     EFARLKPRLVTEATRLFAAPEFGIDILKVQIPLNLSHVEGFGTPTMTRPEAAAALRHA
                     AEAAGDIPLLYLSAGVTFERFESSLKLAVESGAGFAGFMCGRAIWNDAIAIFGNDGPT
                     AAEAWLADEGRRRLARLSEAVA"
     gene            4014..>4291
                     /locus_tag="EYO87_12815"
     CDS             4014..>4291
                     /locus_tag="EYO87_12815"
                     /inference="COORDINATES: protein motif:HMM:PF00171.20"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HIC66853.1"
                     /translation="MNLIPRLPAVRTFLSRVQPLRIDGAEVAGSSELDVFDPSSGAVL
                     CRIASAEPAQIDMAVAAARAALGGPWTRLTPHDRGRLIWKLADAIEER"
BASE COUNT          728 a         1343 c         1482 g          738 t
ORIGIN      
        1 gctgggcgtg gtctgcaacg agttctacgg catgaccgaa gtgaaccatc tgatcggcaa
       61 ttgttcgcgg ctttatccgc gaagacccgg atccatgggc gtggcctatc ccggccacga
      121 cgtgcggctg gtcgatgccg aaggaatcga ggtggcggac ggagagccgg gcgaaatcgt
      181 gacgcctgcg acatcgccga cgcgatttct tggctatctg aacaatgccg ggaaagaggc
      241 cgaattgcgg ctgggcgact ggctgcgcac ccatgatctg gcggtgcgcg atgcggacgg
      301 gtatttctgg tacaagggcc ggtcggacga cctgatcaaa tcgtcgggat tccgcatcgg
      361 cccgaccgag atcgaggaat gcctgctgtc acaccccgcc gtggccgaag ccggcgtgat
      421 cggcaagccg gatgcccagc gtggcacgat cgtcaaggcc ttcgtgcgtc tggcctcggg
      481 attcatcggc gatgcgtcgc tgaccgagga attgcgcgcc catgtccgca acaagctcgc
      541 atcctacaag gcgccacgag agatcgacta tgtggacgaa ttcccgatga cctcgtcggg
      601 caagatcaac cgaaaggccc tgcggcaggc agaaggtaat tgacctgact aatttgtatc
      661 tactaatatg tagaggcaag cgagggatgg cagatgaaat tcggcgttca tgcgggattg
      721 tggatgaaag cgtggcagga cgaccccttg ccgattctcg acatcgcggc cgatctgggc
      781 tttgacgggg tcgagctttc gttgctgggg atcggaatgg accgcgccag cggcatcggc
      841 aaggctgccg ccgcacgcgg gctggacctg acctgttcga ccggcctggg cgccgaggct
      901 gacccgacat cgccgcaggt cgccgtgcgc gaacgggccg ttgccgtcct gaccgaggcc
      961 gtcgaaatca ccgctgccct gggggcaaga tcgctggccg gtgtcgttgc cgcgccatgg
     1021 ggcgtctttg cgccgggcgc ttcggatcgg gccgaccgat cggcacggac cctggcccgg
     1081 atcgaaccgg tgcttgcgca gaatggcgtg accctgggga tcgaggccgt gaaccggttc
     1141 gaaaccgatc tgaccagcac cgccgccgat gccacggcga ttgcccgcgc caccggggcc
     1201 gcgcatgtgg gcgttctgct ggatacgttt cacatgaaca tcgaggagaa ggatccggcc
     1261 gccgcgatcc gcgccaccgg cgacgccctg gtgcattttc atgtctcgga caacgacagg
     1321 ggtgtgccgg gctcgggtca tttcgatttt gaacattgtg ccacggcgct gtcggatatc
     1381 ggctatgacg gctggatcac cgcggaaatg ttcgtgatgc cgtccaaccc gaacagcgcg
     1441 gatgtgaagg tctggcgcgc gatcgagccc gacccgaccg aggccgcgcg gcagacgctg
     1501 gacttcatgc agcgggtctt tgcgcgatga ccgggcccga attcttcttg gcgcttcagg
     1561 cccggatcgc ggtccatgcc gatgcgctga accggctgga tgcagccttg ggagacggcg
     1621 atcatggcgc gaccatgctg cgcggcctga cccgcgcggc gcaggccgac aggggcgcgc
     1681 aggccaaggc gttcatgcgg gcgtcgggtg gtgcatcggg gacgttgttc gggctgatcc
     1741 tgatcgagat cgaacggcat ctgaacgaaa acgccgcgtt gggcgagggc ctgcaacgcg
     1801 cctgcgagcg gatcaaggat ctgggtcagg tgaccacggg cgacaagagc atgatcgacg
     1861 cgctggcgcc ggcggcgcac gcgctggcgg agggcacggt gcaggatgcc gtcgatgccg
     1921 ccgtcgccgg tcgcgaccgc acccgcgacc tgagcgcacg caggggccgc gcgcaatatg
     1981 tcgagaatgg cggacgcggc catgtcgatc ccggcgcggt gtcggtcgtg atcatccttg
     2041 aaaccctggc aggcaaggaa agcgcgctgt gaaaaagctg atgaacgcgg cggaaagcat
     2101 cgtcgacgac atgatcgacg gctatgtgtc ggctttcgaa caggtcgtcc ggggccatca
     2161 ggatccccgc atcgtggtgc gggcgaaggg ccgcaaggat cccgatcgaa aggtgacgct
     2221 gctgatcggc aatggttcgg ggcacgaacc gattgccatg gggttcgtcg gggcgggcct
     2281 tctggatgcc aatgtggtcg gcgacgtgtt cgccgcgccc tcggccgatc tgatccttga
     2341 cggcatccgc gaggtatcgg gcaaggcggg ctgcatcctt ctgatctcgc agcattccgg
     2401 cgacatgatc aacggccgcg cggcagtgat gctggccgag gaagagcggc tgagggtccg
     2461 cgccctgccc atgtatgacg acatctcgtc cgcaccgcgc gaccgcatcc aggatcgtcg
     2521 cggcgccccc ggcaccatgt tcatctacaa gatcctcggc gccgcggccg aggcaggaat
     2581 gccgctggac gatttgatga ccttgggccg ggccgtccgc gcgcgcaccg tgaccctggc
     2641 cgcggcgctg tcgccgggca tctcgccgct gaccggccag ccgatgttcg acctgcccga
     2701 cgacgaaatc tatctgggca tgggggtgca tggcgaaccg gggatcgggc ggacgggggt
     2761 cggcccggta cgcgatctcg tcacgctgat cgtcgacaag ctgctggggg attacccgat
     2821 cgcgtcaggc ggacaggccg ccgtgatcgt caatggcatg ggcggcacca cgctgatgga
     2881 gcttctgacc gtctggaacg agacccgaaa cgcgctggcc gcgcgcggca tcgcggcggt
     2941 cgcgcccatg atcggatcct tcgtgacgac gcaggaaatg ggcggctttt cgatttcgct
     3001 gctcgagcct gcgggcgaca tgctgcggct gtggaccgcg ccctcggata cgccgttctt
     3061 tccgtccatc cggcatgctg aaaaggagaa aagccagtga cccgttccga accactgagc
     3121 atgcgtccga tccgcggagt tgccgtcgat cagggcagcg ggctggcccg gatgctgcgc
     3181 caggcacgcg gtgccaaggc cgggaaaggc gacctgttgc tgttcaagcg actggtggcc
     3241 gagcagctca gccccgaggc cagcaccttg ctggtcgatg cgaattacgg tcgcgaattg
     3301 ctgccctcga tcgcgccggg ctgtgaaagc atgctggcct acgaggccga tgtctatcgc
     3361 atcgcggacg aggaccggat gacggttctg cccgaagacc tcaggatcgc ggattatccg
     3421 gggctggggg tccgggtgct gaagttcttt ctgtattttg cccccaacga cccgaccccg
     3481 atcaatgcgc agaaattcga acgggtgcgc cggatcggcg cggaatgccg cgaacacggc
     3541 atcaccttcc tgttcgagcc gatcgtctat gaccgcgccg tgcccgacga ggacggcgcg
     3601 gaattcgccc ggctgaagcc ccgactcgtg accgaggcga cccggctttt cgccgcgccg
     3661 gaattcggga tcgatatcct caaggtccag attccgctga acctgtccca tgtcgagggt
     3721 ttcggcaccc cgacgatgac ccgccccgag gccgccgccg ccctgcgcca cgccgccgag
     3781 gccgccgggg acattccgct tttgtatctg tccgcagggg tcacgttcga acggttcgaa
     3841 tcctcgctga agctggctgt cgaatcgggc gcgggattcg ccggtttcat gtgcggtcgc
     3901 gcgatctgga acgacgccat cgccatcttc ggcaacgacg gacccaccgc cgccgaagcc
     3961 tggcttgccg atgaaggtcg ccgtcgtctg gcacgcctct ccgaggccgt cgcatgaacc
     4021 tgatcccccg ccttcccgcg gtccggacct tcctgtcgcg cgttcaaccc ctgcgtatcg
     4081 acggggccga ggtcgcgggc tcgtccgaac ttgatgtgtt cgacccgtca agcggggcgg
     4141 tcttgtgccg gatcgcgtcg gcggagcccg cgcagatcga catggcggtg gctgccgcgc
     4201 gcgccgcgct tggagggccg tggacgcgac tgacgccgca tgatcgcggg cggctgatct
     4261 ggaaactggc cgacgcgatc gaggagcgca a
//
LOCUS       DTVW01000982            1050 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2210457, whole
            genome shotgun sequence.
ACCESSION   DTVW01000982 DTVW01000000
VERSION     DTVW01000982.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1050)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1050)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1050
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2210457"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..459
                     /locus_tag="EYO87_12820"
     CDS             <1..459
                     /locus_tag="EYO87_12820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009819002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HIC66854.1"
                     /translation="EAPHSLAGFRRTVEINLIGSFNVLRLAAAEMARNGRDENGVIVN
                     TASIAAFDGQKGQAAYAASKAGIAGMTLPIARDLSSRNIRICAIAPGIFATPMLRGLP
                     TEVQDGLAAGVTFPRRLGDPAEFARMAGTIVENAYLNGEVIRLDGGLRMT"
     gene            627..>1050
                     /locus_tag="EYO87_12825"
     CDS             627..>1050
                     /locus_tag="EYO87_12825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011910570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydrofolate--homocysteine
                     methyltransferase"
                     /protein_id="HIC66855.1"
                     /translation="MTALPPSPAFALLDRAAAERILILDGAMGTQIQNLDLDEVDYAG
                     TGSGHACGHSSERPQKGNNDLLVLTQPEAVEDIHYRYAMAGADIVETNTFSSTTIAQA
                     DYGLEAAVHDLNVAGARVVRRALDRATAEDGRPRFVAGA"
BASE COUNT          188 a          339 c          345 g          178 t
ORIGIN      
        1 gaggcgccgc acagcctggc aggctttcgc cgcaccgtcg agatcaacct gatcggcagt
       61 ttcaacgtgc tgcggctggc cgccgccgag atggcgagga atggccgcga cgagaacggt
      121 gtcatcgtca acacggcctc gatcgcggct ttcgacgggc agaagggaca ggcggcctat
      181 gcggcctcga aggccgggat cgccgggatg acgctgccaa tcgcccgtga cctgtcttcg
      241 cgcaacatcc gcatctgcgc catcgcaccc ggcatcttcg caacgccgat gctgcgcggt
      301 ctgccgacag aagtgcagga cgggctggcc gccggggtga cctttccccg acggctgggc
      361 gatccggccg aattcgcccg gatggcggga acgatcgtcg agaacgccta tctgaacggc
      421 gaggtgatcc ggctggacgg cggcctgcgc atgacctgag acggccgggg gcgcttcgcc
      481 ccccggaccc cccgaaggta tttggaaaga gcgcgaggga gaggcgcaaa agattatcga
      541 ttcacgtcat gatcttctcg cggattatga atttgccatt cgccgggccg ctgtctatcc
      601 agcaggcttc gatgacgagg cccgatatga ccgcattgcc cccttctcct gctttcgccc
      661 tgctggatcg cgcggcggcc gaacggattc tgatccttga cggggcgatg ggcacgcaga
      721 tccagaatct ggaccttgac gaagtggatt atgccggtac cggctcggga catgcctgcg
      781 ggcattcttc ggagcgaccg caaaagggca ataacgacct gctggtcctg acccaacccg
      841 aggcggtgga ggacatccac tatcgctatg ccatggccgg ggccgatatc gtcgagacca
      901 acaccttttc ctcgaccacc atcgcgcagg ccgattacgg actggaagcg gccgttcacg
      961 atctgaatgt cgcaggcgcg cgcgtcgtgc ggcgggccct ggaccgcgcc accgccgagg
     1021 atggcaggcc acgtttcgtg gccggcgccc
//
LOCUS       DTVW01000983            3040 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2210873, whole
            genome shotgun sequence.
ACCESSION   DTVW01000983 DTVW01000000
VERSION     DTVW01000983.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3040)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3040)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3040
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2210873"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..852)
                     /locus_tag="EYO87_12830"
     CDS             complement(<1..852)
                     /locus_tag="EYO87_12830"
                     /inference="COORDINATES: protein motif:HMM:PF15887.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66856.1"
                     /translation="MADSRGQVNCPTRRARLKIRSPTRNRGPPRRIPCCHPEEAQMQT
                     FTCPACHNRVYFDNLFCSCGQPLYYEPEARDMWNAATPCANREAINCNWAAMPDNMLC
                     RSCAMSEILPALNVGDNQALLARAERAKRWVLANLSNWDWFTDADQGSRPAFRMLSED
                     TGIGRAQQIMMGHDNGEITINITEADERIRVQRQHQMGEQYRSMVGHFRHEIAHFLFD
                     RLTVAEGFLDEFRALFGDERADYAAALQDHYAAPREPGEDYITGYATAHPHEDWAETA
                     AHLQHMVD"
     gene            1005..1424
                     /gene="rplU"
                     /locus_tag="EYO87_12835"
     CDS             1005..1424
                     /gene="rplU"
                     /locus_tag="EYO87_12835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008757613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L21"
                     /protein_id="HIC66857.1"
                     /translation="MFAVLKTGGKQYKVQAGDVLRVEKLNASAGETVQFNDILMVGSA
                     LGAPLVEGSCVQAEVIDQITADKVLTYVKRRRKHSSQRTRGHRQQLTLVRVTDVLDKG
                     ANKTGVKTAVGARSKDEAPAGKPEAKAKKPAKDAAEA"
     gene            1436..1708
                     /locus_tag="EYO87_12840"
     CDS             1436..1708
                     /locus_tag="EYO87_12840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020039165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="HIC66858.1"
                     /translation="MAHKKAGGSSRNGRDSAGRRLGVKLYGGQEATAGNILVRQRGTK
                     WWPGDNVGMGKDHTLFALTDGQVTFRKGLKGRTFISVIPASLEAAE"
     gene            1864..2385
                     /locus_tag="EYO87_12845"
     CDS             1864..2385
                     /locus_tag="EYO87_12845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013068007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HIC66859.1"
                     /translation="MNQPVIETERFVLRPLRPSDAGMIAHYTSDRRVAQGTRAIPHPL
                     PPGAAEDFVARALSPSRTEDVWAIDGSVHRLAELLGVVSLTRMEGDQSELGFWIGAGF
                     WNTGFATEAVEALVAANPHKARTLFAEAFQDNPGSARVLTNCGFVYLGDAESWSVARG
                     ARVATWTYLRRMG"
     gene            2480..>3040
                     /locus_tag="EYO87_12850"
     CDS             2480..>3040
                     /locus_tag="EYO87_12850"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005673485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MsnO8 family LLM class oxidoreductase"
                     /protein_id="HIC66860.1"
                     /translation="MSNLPYSLLDLAPVPEGSEASEAIANSLDLARHAENWGYHRYWL
                     AEHHNMPGIASSATAVLIGLVAQATRRMRVGAGGIMLPNHAPLTVAEAFGTLATVFTN
                     RIDLGLGRAPGGDGAVIRALRRDPMADSFPQDVMELLDYLGPRRDGAAVRALPGEGTE
                     VPVWILGSSLFGAQLAAHLGLPYAFAS"
BASE COUNT          517 a          937 c         1051 g          535 t
ORIGIN      
        1 atcgaccatg tgctgaagat gcgccgccgt ttcggcccag tcctcgtgcg gatgggcggt
       61 ggcatagccg gtgatgtagt cttcgccggg ttcccggggg gcggcatagt ggtcttgcag
      121 ggcggcggca taatcggcac gctcgtcgcc gaacagcgcg cggaactcgt ccaggaaacc
      181 ctcggcaacg gtcagcctgt cgaacaggaa atgcgcgatc tcgtggcgga aatgaccgac
      241 catcgaacga tattgctcgc ccatctgatg ctggcgctga acccggatcc gttcgtcggc
      301 ctcggtgatg ttgatcgtga tctcgccatt gtcatgtccc atcatgatct gctgggcgcg
      361 cccaattccg gtgtcttccg acagcatccg gaacgcgggc cggctgccct gatcggcatc
      421 ggtgaaccag tcccagttgg acaggttcgc cagaacccat cgcttcgcgc gctcggcccg
      481 ggcaagcaat gcctgattgt cgcccacgtt cagcgccgga aggatttcgg acatcgcgca
      541 agagcggcac agcatgttgt cgggcatcgc cgcccagttg cagttgatcg cctcgcggtt
      601 ggcgcagggc gtggctgcgt tccacatgtc gcgcgcttcg ggttcgtaat agagcggctg
      661 tccgcaagaa cagaacaggt tgtcgaaata gacgcggttg tgacatgcgg ggcaggtgaa
      721 ggtctgcatc tgggcttcct cgggatggca gcagggaatg cgccggggcg ggccgcggtt
      781 ccgagtgggc gagcgaattt tcaggcgggc gcggcgggtc gggcagttga cttggccacg
      841 cgaatccgcc atatgcacgc gaccggccgg gcggacgccc ttggccggtg tgttgttttc
      901 aaggacatcc cgatgggcgg gatgcgctgt ccgaggcggg gaaaccccgg aaacgccggc
      961 atgaggccgg ggccacaggg cgcggatgac gaaggaaaga tgcgatgttc gcagttctga
     1021 agacgggcgg caagcaatac aaggtgcagg cgggcgacgt cctgcgcgtg gaaaagctga
     1081 atgcctctgc tggcgagacg gtccagttca acgatattct catggtcgga tcggctctgg
     1141 gcgcgccgct ggtcgaaggc tcctgcgtgc aggctgaggt gatcgaccag atcacggccg
     1201 acaaggtgct gacctatgtc aagcgccgcc gcaagcacag ctcgcagcgg acgcgcggcc
     1261 accgccagca actgacgctg gtacgcgtga ccgacgtgct ggacaagggc gccaacaaga
     1321 ccggcgtgaa gaccgccgtg ggcgcccgca gcaaggacga ggcgccggcc gggaaacctg
     1381 aggccaaggc caagaaaccg gccaaagacg ccgctgaagc gtaaggagac agaccatggc
     1441 acacaagaaa gcaggcggtt cctcgcgcaa cggtcgcgat tccgcgggcc gccgtctcgg
     1501 cgtcaagctg tatggcggtc aggaagcgac cgccggcaat atcctcgtgc gtcagcgcgg
     1561 caccaaatgg tggccgggcg acaatgtcgg catgggcaag gatcataccc tgttcgcgct
     1621 gaccgatggc caggtgacct tccggaaggg tctgaagggc cgcacgttca tttcggtgat
     1681 tccagccagc ctcgaggccg ccgagtaacc caagcttaac atttcgatgt tagagggggg
     1741 tcggcgaaag ccggtccccc gacctgtttt catgctctgt ttttccggga gggggaaatg
     1801 gtgatgtctg ctccgatgcg ggaaggtaac aggttggaag acctgaagcc ggccggcgcc
     1861 gtaatgaacc agcccgtcat cgagaccgaa cgtttcgtgc tgcggcccct gcgtccgtcc
     1921 gatgccggca tgatcgcgca ttacacatcc gatcgccggg tggcgcaggg cacgcgggcc
     1981 atcccccatc cgctgccccc cggcgcggcc gaggatttcg tggcccgcgc cctgtcgccg
     2041 tcgcggaccg aggatgtctg ggcgatcgac ggctcggtgc accggcttgc ggaattgctg
     2101 ggcgtcgtct cgctgacccg gatggagggc gaccagtccg agcttggctt ctggatcggt
     2161 gccggcttct ggaacacggg ctttgccacc gaggcggtcg aggcgctggt ggcggccaac
     2221 ccgcacaagg cgcggaccct gttcgccgag gcgtttcagg acaatccggg ctcggcgcgg
     2281 gtgctgacca attgcgggtt cgtctatctg ggcgatgcgg aaagctggtc ggtcgcgcgc
     2341 ggtgcgcggg ttgccacctg gacctacctg cgcaggatgg gctgaaacgg gcggggcttt
     2401 ttccggcccc gcagtcagac cccgcgctat cggccgcttg gcccgttgca atcctgcgcg
     2461 caatccctaa ttgcccggga tgagcaatct tccctattcc cttctcgatc tggctccggt
     2521 tcccgagggt tccgaggctt ccgaggccat cgccaacagt cttgatcttg cccgccacgc
     2581 cgaaaactgg ggctatcacc gctattggct ggccgaacat cacaacatgc cgggcatcgc
     2641 cagttccgcg accgcggtgc tgatcggact ggtagcccag gccacccgtc ggatgcgtgt
     2701 cggggctggc ggcatcatgc tgccgaacca tgcgccactg accgtggccg aggcattcgg
     2761 aacgctggcc accgtcttca cgaaccgaat cgatctgggg ctgggccgcg cgccgggtgg
     2821 cgacggcgcc gtgatccggg cactgcgccg cgatccgatg gccgacagtt ttccgcagga
     2881 tgtgatggaa ctgctggatt atctgggtcc gcggcgcgat ggcgcggccg tgcgcgcgct
     2941 gccgggcgag gggaccgagg ttccggtctg gatcctcggc agcagcctgt tcggggcgca
     3001 actggccgcg catctgggcc tgccctatgc ctttgccagc
//
LOCUS       DTVW01000984            6423 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2212690, whole
            genome shotgun sequence.
ACCESSION   DTVW01000984 DTVW01000000
VERSION     DTVW01000984.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 6423)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6423)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6423
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2212690"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            211..669
                     /locus_tag="EYO87_12855"
     CDS             211..669
                     /locus_tag="EYO87_12855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HIC66861.1"
                     /translation="MKLSTKGRYAIIALTDLAIARQDEMTSLAEISKRQDISLPYLEQ
                     LFVRLRRAGLVTSVRGPGGGYRLARAAETIRIAEVLEAVDETVSAMHVGAGASGGVSG
                     SRAQTLSNRLWESLSAHVYVFLHNHTLGDVAKNQLLPCPALPQILNVVDE"
     gene            complement(754..837)
                     /locus_tag="EYO87_12860"
     tRNA            complement(754..837)
                     /locus_tag="EYO87_12860"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:1.23"
                     /anticodon=(pos:complement(803..805),aa:Tyr,seq:gta)
     gene            974..1777
                     /locus_tag="EYO87_12865"
     CDS             974..1777
                     /locus_tag="EYO87_12865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010396086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HIC66862.1"
                     /translation="MADRPGKPRKPAWVIDKERTRRAAAAETVWLFGLHAVRDALANP
                     AREKLRLVATRNAVDRLGDLSGMTPEITDPRVFAKTVPLSPDSVHQGAALEVKPLKWG
                     SLSEVALRQAPGEARPLLVALDRVSDPHNIGAVLRSAEVFGARAVIAPARHSAPETGA
                     LAKTASGALERQPYLRVPNLAEALSQLKAMGFVLIGLDGSGSRPLPDLLSDLDGRAIC
                     LVLGAEGPGMRDLTTRSCDHVARIPFAADFGSLNVSNAAAVALYAAAQR"
     gene            1869..2279
                     /locus_tag="EYO87_12870"
     CDS             1869..2279
                     /locus_tag="EYO87_12870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011750060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66863.1"
                     /translation="MKPLILSLLLVFASVIPAAAQIWALGGYDVVSYQKSGRPIPGRT
                     DIATMWQGKIWHFATEENRARFEADPRSYAPGFGGLCPVSLAEGTKQKGDPRYFVIIG
                     KRLYLLRSAAAERQLLSAPREVIMQARETLSRMR"
     gene            2518..2949
                     /locus_tag="EYO87_12875"
     CDS             2518..2949
                     /locus_tag="EYO87_12875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008329769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-binding protein"
                     /protein_id="HIC66864.1"
                     /translation="MDIDLDDDRDISRIAHDAKVIAVVGLSADETRPSWGVARYLQAQ
                     GFRIIPVNPGNAGEEILGETVYASLSEIPPDARVDMVDIFRRSSAVPDIVNEALAVLP
                     ELRVIWTQLGVRHDGAADQARSRGITVVQDRCPKIEFPRHL"
     gene            complement(3023..5083)
                     /locus_tag="EYO87_12880"
     CDS             complement(3023..5083)
                     /locus_tag="EYO87_12880"
                     /inference="COORDINATES: protein motif:HMM:PF00691.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor protein MotB"
                     /protein_id="HIC66865.1"
                     /translation="MRRIIHNTTAIAACLSIFASGAAIAETAVQPNPSYRVAQGQGND
                     ASPQDEGTLKKLIEAEKQKQARERAQKEKQAEAQKKSRDEKKPDKTKAENGKKKDAAS
                     GSAKAKAKEDKRPAKADRAKDGTRPKEKAAARKAEDAKRPAQADRARQEQRPRGKDDR
                     QDRAAKDKKRNDGDRAKGRAEAVRDENKADRARERDDRKDQGQGTLGKAITDAKSRQR
                     READAGRRLVLARGDVARKRTGTMPGLGAVLASEIDGGLRDGDLKCLSGGSYPCGDRE
                     AMITPKGVLVERSDDGQLRLAPADSQMFRANDKGDLVRRVAEEGNRETEGARQAARET
                     KASDAKALLDGLTGQVTRDKVTRDNSRQSSQDFQTSLLNALQQKDGNRQEAKKDGNDN
                     NDLTRALVLGLGALAVGSYLNNNRQVALSSPDRVVVTRADGSQEVIKDEVALLRQPGS
                     DITTENFDDGSSRTIVTRPDGSKVVTIRDADLRVLRRTLISPDGRSTRLIDDTRTVAP
                     VNIAALPAPAQPVTQPETQMDEAALRAALQQEANVDRRFTLSQIRNIPEVRALVAPVD
                     LDAITFDTGSAAIKPDQARQLSTLGNVIQEAVAKNPREIFMVEGYTDTVGSDPMNLAL
                     SDRRAESVALALTEYFDVPPENLVVQGYGEQYLKVRAEGDIRANRRASVRRITDLLQT
                     AQAE"
     gene            5243..>6423
                     /locus_tag="EYO87_12885"
     CDS             5243..>6423
                     /locus_tag="EYO87_12885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_354377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
                     /protein_id="HIC66866.1"
                     /translation="MAAKDSPVPVRFDWEDPFRLEDQLSEEERMLRDAARAYAQDKLQ
                     GRVIAAYRDETTDPDIFREMGEMGLLGVTIPEEFGGIGASYVAYGLIAREVERVDSGY
                     RSMMSVQSSLVMYPIHAYGSDAQRRRYLPKLASGEWIGCFGLTEPDAGSDPGGMKTVA
                     KKTDGGYVLSGSKMWISNSPIADVFVVWAKSDAHGGKIRGFVLDRGMKGLSAPRIGGK
                     LSLRASITGEIVMDGVEVGEDALLPGVEGLKGPFGCLNRARYGISWGVMGAAEFCLHA
                     ARQYGLDRRQFGKPLAQTQLHQLKLANMMTEISLGLQASLRVGRLLDQAQAAPEMISI
                     VKRNNCGKALEIARWSRDMHGGNGISEEYQVMRHMANLETVNTYEGTHDIHALILGRA
                     IT"
BASE COUNT         1032 a         2055 c         2124 g         1212 t
ORIGIN      
        1 ccttcgagac ggccttcggg gccgggaaaa atcagctctg gcatcgtcgt ccttcacgaa
       61 cttggtggtt ccttgacgcc ttcgcgtccg gcttctagac cgtatcatct gggaagccgg
      121 caccgattgc gcaagaaacg ggcctcggcg gcataacgca gccgtgcgac acccgtcaat
      181 gcggcgtgca cggcgagggg agagcgggcg atgaaactgt cgaccaaggg gcgctatgcc
      241 atcattgcgc tgaccgatct ggcgatcgcg cgccaggacg agatgacttc gctggccgag
      301 atttcgaaac gccaggacat ctcgctgccc tatctggaac agcttttcgt gcggctgcga
      361 cgcgcgggtc tggtgacctc ggtgcgcggc cccggcggcg ggtatcgcct tgcccgcgcg
      421 gccgaaacga tccgcatcgc cgaggtgctg gaggcggtcg acgaaaccgt cagcgccatg
      481 catgtcgggg ccggggcctc gggcggggtg tcgggatcgc gggcgcaaac gctgtcgaac
      541 cggctgtggg aaagcctgtc ggcgcatgtc tatgtcttcc tgcacaatca cacgctgggc
      601 gacgtggcca agaaccagct gcttccctgc cccgccttac cgcagatcct gaacgtcgtg
      661 gatgaatgac aggaggcagc cggtcggcgg caagatttca aggcaggtct cgccagatgc
      721 aaccagcggc gaagcacttg atctgatgaa agatggtggg cgaccctgga atcgaaccag
      781 gcatgggtct ccccggcgga gttacagtcc gctgccgcac cttgcagcac gtcgcccgcc
      841 gacagccttc ggcgtggggg cgtgattagc cgccaggccc aaggccgtca agcggatttc
      901 ccgccctcat cggccggggc ttgcacagcc cgtccgggac gcgcaagagg acagcatgcg
      961 aaaggatccg cagatggccg acagacccgg aaaacccaga aagcccgcat gggtgattga
     1021 caaggaacgc acccgccgcg cggcggcggc cgagacggtc tggctgttcg gcctgcacgc
     1081 ggtccgcgac gcgctggcca atccggcgcg ggaaaaactg cgtctggtgg ccacgcgcaa
     1141 cgccgtggac cggctgggcg atctgtccgg catgacgccc gaaatcaccg atccgcgcgt
     1201 cttcgccaag accgtgccgc tgtcccccga tagcgtccat caaggtgccg cgctggaggt
     1261 gaagccgctg aaatggggca gtctcagcga agtcgcgctg cgccaggcac cgggcgaggc
     1321 gcgccccctg ctggtggcgt tggaccgggt cagcgacccg cacaatatcg gcgcggtcct
     1381 gcgttcggcc gaggtgttcg gcgcccgcgc ggtgatcgcg cccgcccgtc attccgcgcc
     1441 cgagaccggc gcgctggcca agaccgcctc gggcgcgctg gaacggcagc cctatctgcg
     1501 ggtgccgaac ctggccgagg cgctgtcgca gctgaaggcg atgggcttcg tgctgatcgg
     1561 tctggatggc agcggcagcc ggcccctgcc cgatctgctg agcgatctgg acggccgcgc
     1621 gatctgtctg gttctggggg ccgaggggcc gggaatgcgc gatctgacca ccagaagctg
     1681 cgatcacgtg gcgcgaattc cctttgccgc cgatttcggg tcactgaacg tgtcgaacgc
     1741 ggccgccgtg gcgctgtatg cggcggcaca acgctgactt cacttccctg cgacgattcg
     1801 cgtgtgggcg ttgagaatcg ccgccgtccc tgccaatgag gacgggtccc caatattcgt
     1861 ccggccacat gaaacccctg atcctgtcgc ttctgctcgt tttcgcttcg gtcattccgg
     1921 ccgccgcgca gatctgggcg cttggcggat acgatgtggt cagctaccag aaatcggggc
     1981 ggccgatccc tggccggacc gatatcgcga cgatgtggca gggcaagatc tggcatttcg
     2041 ccaccgaaga gaaccgtgcc cggttcgaag cggatccgcg atcctatgcg cccggtttcg
     2101 gcggcctctg ccctgtctcg ctggccgagg gcacaaagca gaagggcgat ccgcgctatt
     2161 tcgtcatcat cggcaagcgg ttgtatctct tgcgctcagc ggcggccgaa aggcagcttc
     2221 tgtcggcgcc gcgcgaggtc atcatgcagg cccgggaaac gctgtcgcgg atgcgatgat
     2281 gcacgcaacg ccctgttcgc gggccgtcac gcattgcgga aacgcgaatc acgaattcgc
     2341 gaaaggggtg gaacttttcg ccgcagatcc ccatttgtct gtcagaacat ggccccggaa
     2401 cggtcatgtt cggatcactg tccctcgttc cgcgactagc gcccggccag aattctggac
     2461 cgggcgcctt ttctatgcaa tgggtctacg acctgcggtt gaggaaggag gctcgccatg
     2521 gatatcgacc tggacgacga cagggatatt tcccggatcg cccatgacgc gaaggtcatc
     2581 gccgtcgtcg gcctgtcggc cgatgaaacc cggccaagct ggggcgtcgc acgctatttg
     2641 caggcacagg gtttccggat catcccggtc aatcccggca atgccggaga ggaaattctg
     2701 ggcgaaaccg tctatgccag cctgtccgaa attccgcccg acgcgcgggt ggacatggtg
     2761 gacatctttc gccgttcctc ggccgtgccc gacatcgtga acgaggcgct ggcggtgctg
     2821 cccgagctca gggtgatctg gacgcagctt ggcgtacgcc atgacggagc cgccgatcag
     2881 gcccggtcgc ggggcatcac ggtggtgcag gaccgctgcc cgaagatcga atttccgcgc
     2941 cacctgtaaa gcatcagggt gcggcctcga atgattgaag gccccggcgt gaccggggcc
     3001 ttctcattgt ctgtggcggc gatcactcgg cctgggcggt ctgcaacaga tcggtgatgc
     3061 ggcgcaccga cgcgcggcgg ttcgcgcgaa tatcgccctc ggcccggact ttcagatatt
     3121 gctcgccata gccctgcacg acgagatttt cgggcggcac atcgaaatat tccgtcagtg
     3181 ccagggcgac cgattcggcg cgccggtccg acagcgccag gttcatcgga tccgagccga
     3241 cggtatcggt atatccctcg accatgaaga tctcgcgcgg gttcttggcg acggcctcct
     3301 ggatgacatt gcccagcgtc gacaattgcc gcgcctggtc gggcttgatc gcggcagagc
     3361 cggtgtcgaa ggtgatcgcg tcaagatcga ccggcgcgac cagtgcgcga acctcgggaa
     3421 tgttgcggat ctggctcagc gtgaagcggc ggtccacatt cgcctcttgc tgcagggcag
     3481 cgcgcagcgc cgcctcgtcc atctgcgtct cgggctgggt gacgggctgg gccggcgccg
     3541 gcaaggccgc gatgttgacg ggcgccaccg tcctggtgtc gtcgatcagc cgcgtcgagc
     3601 ggccgtcggg cgagatcagt gtcctgcgca gcacccgcag atcggcgtcg cggatggtga
     3661 cgaccttgct gccatccggg cgcgtcacga tggttcgcga cgagccatcg tcgaaattct
     3721 cggtcgtgat gtcggatccg ggctggcgca gcagcgccac ctcgtccttg atgacctctt
     3781 gcgagccatc ggcacgggtg acgacgacac ggtcgggcga gctgagcgcc acctgacggt
     3841 tgttgttcag ataggatccg accgccagcg cgcccagtcc cagcaccaga gccctggtca
     3901 gatcgttgtt gtcattgccg tccttcttcg cctcttgacg gttgccgtct ttctgctgca
     3961 gcgcattgag cagcgaggtc tggaaatcct gcgacgattg gcgcgagttg tcgcgcgtta
     4021 ccttgtcgcg cgtcacctga ccggtcagcc cgtccagcag ggcctttgca tccgaggctt
     4081 tcgtctcgcg cgcggcctga cgggcgcctt cggtctcgcg gttgccttcc tcggccacgc
     4141 gccggaccag atcgcccttg tcattggcgc ggaacatttg cgaatctgcg ggcgcaagcc
     4201 gcaactggcc atcatccgag cgttcgacca gcacgccctt cggcgtgatc atcgcctcgc
     4261 ggtcgccaca gggatagctt cctcccgaaa ggcatttcag atcgccatcg cgcagtccgc
     4321 catcgatctc ggatgccagg acggcgccca ggccgggcat ggtgccggtg cgcttgcgcg
     4381 ccacatcacc cctggccagc accagccgcc ggccagcatc ggcctcacga cgctgcctgg
     4441 acttggcgtc ggtgatcgcc ttgcccagcg tgccctggcc ctggtctttg cggtcgtcgc
     4501 gctcacgggc acggtctgcc ttgttctcgt ccctgacggc ttcggcacgg cccttggcgc
     4561 ggtcgccatc gttccgtttc ttgtccttcg ccgcccgatc ctgacggtca tccttgccgc
     4621 gcggccgctg ttcctgcctg gcgcgatcag cctgcgcggg gcgcttggcg tcctcggcct
     4681 tgcgcgcggc ggccttttcc ttcgggcggg tgccatcctt ggcgcgatcg gccttggcgg
     4741 gtcgcttgtc ttccttggcc ttggccttgg ccgacccgga cgcggcatct ttcttcttgc
     4801 cgttttccgc cttggtcttg tcaggcttct tttcgtcgcg cgactttttc tgcgcctcgg
     4861 cctgcttttc cttctgcgcc ctttcccgag cctgtttctg cttttccgcc tcgatcagct
     4921 tcttcagcgt gccttcatcc tgcggcgacg catcgtttcc ttgcccttgc gccaccctgt
     4981 aggatgggtt cggctggacg gctgtttcgg cgattgccgc gcctgaggcg aagatagaca
     5041 ggcaggcggc tatcgccgtc gtgttatgta tgattcggcg catggcgcaa catcctccgt
     5101 cggtgtttcc cggttaccgc aataacagag gtttttccga ccggttccaa catgcgcgtg
     5161 aaccctttcg tgatgtggcg ccattgccag cctttcatcc cgcaggctag agatcggtca
     5221 ggcagatgca ggagaagacg cgatggcagc caaggatagc ccggttccgg tccggttcga
     5281 ctgggaagat ccgttccggc tggaggatca actgagcgaa gaggaacgga tgctgcgcga
     5341 cgcggcccgg gcctatgccc aggacaagct gcaaggccgc gtcatcgccg cctatcgtga
     5401 cgagacgacc gaccccgaca tctttcgcga aatgggagag atggggttgc tgggcgtcac
     5461 catccccgag gaattcggcg gcatcggcgc atcctacgtg gcctacgggc tgatcgcgcg
     5521 cgaggtcgag cgggtcgatt cgggctatcg cagcatgatg tcggtgcaat cctcgctggt
     5581 gatgtatccg atccacgcct atggcagcga cgcacagcgt cgcagatacc tgccgaaact
     5641 ggcctcgggc gaatggatcg gctgtttcgg cctgaccgaa cccgatgcgg gctcggatcc
     5701 ggggggcatg aagacggtcg cgaagaagac cgatggcggc tatgtgctgt cgggatcgaa
     5761 gatgtggatc tcgaattcgc ccatcgccga tgttttcgtc gtctgggcga aatcggacgc
     5821 ccatggcggc aagatcaggg gattcgtgct ggacaggggc atgaaggggc tgtcggcgcc
     5881 caggatcggc ggcaagctgt ccctgcgcgc ctcgatcacc ggcgaaatcg tgatggatgg
     5941 cgtcgaggtg ggcgaggacg cgctgctgcc cggcgtcgag ggtctgaagg ggccgttcgg
     6001 ctgcctgaac cgagcgcgct atggcatatc ctggggggtg atgggcgcgg ccgagttctg
     6061 ccttcacgcg gcgcgccaat acgggctgga ccgtcggcaa ttcggcaagc cgctggcgca
     6121 gacgcaactg caccagttga aactggccaa catgatgacc gagatttccc tgggcctgca
     6181 agccagcctg cgcgtcggcc ggctgctgga tcaggcgcag gccgccccag agatgatctc
     6241 gatcgtcaag cgcaacaatt gcggcaaggc gctggagatt gcgcggtggt cgcgcgacat
     6301 gcatggcggc aacgggattt ccgaggaata tcaggtcatg cgacacatgg cgaacctgga
     6361 aacggtgaac acctacgagg gcacgcacga catccacgcg ctgatccttg gccgcgcgat
     6421 cac
//
LOCUS       DTVW01000985            3710 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2212806, whole
            genome shotgun sequence.
ACCESSION   DTVW01000985 DTVW01000000
VERSION     DTVW01000985.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3710)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3710)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3710
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2212806"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(121..1170)
                     /locus_tag="EYO87_12890"
     CDS             complement(121..1170)
                     /locus_tag="EYO87_12890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011747627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase"
                     /protein_id="HIC66867.1"
                     /translation="MIPVFDGHNDFIQRVVAAGEDGARIWLEGDGTGHLDLPRARAGG
                     LVGGFFALWVPSPANPNDVESIALMQDPPFHLPLPDEIAHDSALPFAFRQAAALKMLE
                     RTGTLEVVTSATGLRRAIAENRFAAVMHMEGAEAIRDMDALHLWHAAGLRSLGPVWSR
                     PTAYGEGVPFAYPAGPDIGAGLTPQGRDLVRECNVLRIMLDLSHLNEAGFDDVARLSD
                     APLVASHSCVHAICPSARNLTDRQLQVIRDSGGLVGLNYASSFLREDGKRLPLKGFDT
                     ILRHLDRLLAVLGEDGVGLGSDFDGALMPEELADAAALPALIRAMEAHGYGDALIRKI
                     AGENWISLLARVWGN"
     gene            1309..1632
                     /locus_tag="EYO87_12895"
     CDS             1309..1632
                     /locus_tag="EYO87_12895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008282318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HIC66868.1"
                     /translation="MPDIRTEFDGQTVITTFEVTPGSAQDVLEMLTAAWDQVIRRQPG
                     FIAGAVHLNDAQTRIATYSQWRDRKDYQAMLRSDEMRRRNREIHAMCKSFEPVMYEVQ
                     AVFGD"
     gene            1713..2348
                     /locus_tag="EYO87_12900"
     CDS             1713..2348
                     /locus_tag="EYO87_12900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011747629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HIC66869.1"
                     /translation="MAGRIITVAQQKGGSGKTTLAINLAVCLHQRGHSVALVDTDPQG
                     SMGRWFIERLQAQGEDEAMDFSTSSAWGASYESEKLKKRFDYVIVDTPPKIDSDLRPA
                     LRVADLVLVPVATSHVDLWATEGVLDLARREKSPVLVVLNRVRPHTRLSVEVARKAAE
                     LGADVAGTQVANRVAYAETLGQGLGVAERARNGVARDEMAALTDEVLAAFG"
     gene            complement(2364..3101)
                     /locus_tag="EYO87_12905"
     CDS             complement(2364..3101)
                     /locus_tag="EYO87_12905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011750611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIC66870.1"
                     /translation="MLLALANLAVTRRNRPVLRGIDLTLQEGEVVGLIGPNGAGKSTL
                     MEAALDLIPFSGASSLASMTARDRARAAAFLPQSREIAWPVSVEDLIALGRIPWPGGG
                     RSDADRDAIEAAIARMGLAPFRKRTALRLSGGEQNRVLVARALAQDTPLLIADEPIAG
                     LDPAQQLACLRLFRDLASGGRGILTSIHDLGLAARFCSRLVLLAEGRILADGPPDRVL
                     DDALLNRAFGITARRIETPDGPAILPV"
     gene            complement(3101..>3710)
                     /locus_tag="EYO87_12910"
     CDS             complement(3101..>3710)
                     /locus_tag="EYO87_12910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007799148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HIC66871.1"
                     /translation="LLVALAGPRGGSVTLILAGVAISALAGAGTALVLNLSPNPYAAN
                     EIVFWLMGSLADRSMVHVWLVLPPMLLGAALILSAGRPLDALTLGEGAAAAMGVSPPW
                     LRWRMIAGVALIVGPATAVAGAIGFVGLVVPHVMRPWVGARPSVLLAASALGGAILLL
                     AADVAVRLILPERDLKLGVLTAIVGAPLFLHLIWKTRSGGRV"
BASE COUNT          650 a         1263 c         1288 g          509 t
ORIGIN      
        1 ccaggccgcg ccggtaaatg gcgaggcgca ggcgaccgag tagcgcggcc cggatcgccg
       61 aggcgcgggc atcggggagg ccgcgcccat gatggccggg tgatgaaccg gccgtcgggg
      121 tcagttgccc cagacccggg ccagcaggga aatccagttt tcaccggcga tcttgcggat
      181 caaggcgtcg ccatagccat gcgcctccat cgcgcggatc agggcgggca gggcggccgc
      241 gtcggccagt tcctcgggca tcagcgcacc gtcgaaatcc gaacccaggc cgactccgtc
      301 ctcgcccagg accgccagca ggcgatcgag atggcgcagg atcgtatcaa agccctttaa
      361 cggcagccgc ttgccgtcct cgcgcagaaa gctggaggca tagttcagcc cgaccagccc
      421 gccgctgtcg cggatgacct gcaactggcg gtcggtcagg ttccgggccg aggggcagat
      481 agcatgcacg cagctgtggc tggctaccag cggcgcgtcg gacaggcgtg ccacatcatc
      541 gaacccggcc tcgttcagat gcgacagatc cagcatgatc cgcaagacgt tgcattcgcg
      601 gaccagatcg cgcccctgcg gtgtcagtcc cgcgccgata tcggggccgg ccggataggc
      661 aaagggcacg ccttcaccgt aggccgtggg ccgcgaccag accggtccca gcgatcgcag
      721 tcccgccgcg tgccacagat gcagcgcatc catgtcgcgg atcgcttcgg ccccctccat
      781 gtgcatgacc gcggcgaagc gattttcggc gatcgcgcgg cgcagaccgg tggcgctggt
      841 cacgacctcc agcgtgccgg tgcgttccag catcttcagt gccgccgcct gccggaaggc
      901 gaagggcagg gcgctgtcat gcgcgatctc gtcgggcagc ggcaggtgaa agggcggatc
      961 ctgcatcagc gcgatggatt cgacatcatt gggattggcg ggcgaaggca cccagagagc
     1021 gaaaaatccg ccgaccagcc cgcccgccct ggcgcgtggc agatccagat ggccggtccc
     1081 gtcgccttcc agccagatcc gcgccccgtc ctcgcccgcc gcgacgacgc gctggatgaa
     1141 atcgttgtga ccatcgaaca ccgggatcat gcaatgcctc ctttgccgcc cgcgccgacc
     1201 atgcaccctg gcgcgagcgc cggcaatgcc gcgcagttgc cactttgcgt gctgcggatt
     1261 cccccctagg ctgggcgccg ggatgcgtca gcagaggagg ggccagccat gcccgatatc
     1321 aggaccgaat tcgacggcca gaccgtgatc accaccttcg aggtgacgcc cggcagcgcg
     1381 caggacgtgc ttgagatgct gaccgccgcc tgggatcagg tgatccgccg gcaacccggc
     1441 ttcatcgccg gcgcggttca cctgaacgac gcgcagaccc ggatcgccac ctattcgcag
     1501 tggcgcgacc gcaaggatta tcaggcgatg ctgcgtagcg acgagatgcg tcgccgcaac
     1561 cgcgagatcc atgcgatgtg caaaagcttc gagccggtga tgtacgaggt tcaggcagtt
     1621 ttcggcgatt gatgtcgcgg cccgcaagat agcccgtgca atcgctgaac cggcccgata
     1681 cgttttggaa agcgcgtgac gaggaggcag cgatggcagg caggatcatc accgtcgccc
     1741 agcagaaggg cggctcgggg aaaaccaccc tggcgatcaa tctggccgtg tgcctgcatc
     1801 agcgcggcca ttccgtcgcc ctggtcgata ccgatccgca aggcagcatg ggccgctggt
     1861 tcatcgagcg gcttcaggcg cagggcgagg acgaggccat ggatttctcg acctcatcgg
     1921 cctggggggc cagctacgaa tccgagaagc tgaagaagcg tttcgattac gtgatcgtgg
     1981 acacgccgcc caagatcgac agtgacctgc gccccgcgct tcgcgtcgcc gatctggttc
     2041 tggttccggt cgccaccagc catgtcgatc tgtgggcgac cgagggtgtg ctggatctgg
     2101 cgcggcgcga gaaatcgccg gttctggtgg tgctgaaccg ggtccggccg catacgcgcc
     2161 tttcggtcga ggtggcccgg aaggcggccg aactgggcgc cgatgtggcc ggcacgcagg
     2221 tcgccaaccg cgtcgcctat gccgagacgc tgggtcaggg cctcggcgtt gccgaacgcg
     2281 cccgaaacgg cgtggcgcgc gacgagatgg ccgcgctgac ggacgaggtt ctggccgctt
     2341 tcggctgaga attgcgccgg cggtcacacc ggcaggatgg cgggaccatc cggcgtctcg
     2401 atgcgacgcg cggtgatgcc gaaggcccgg ttcagcagcg cgtcgtccag cacccggtcg
     2461 ggcgggccgt cggccaggat gcggccctcg gccagaagga ccagcctgct gcagaagcgg
     2521 gcggcaaggc ccagatcgtg aatcgaggtc aggatgcccc ggcccccgga cgccagatcg
     2581 cggaacaggc gcaggcaggc cagttgctgt gccggatcga gaccggcgat gggttcgtcc
     2641 gcaatcagaa ggggggtgtc ctgggccagc gcccgcgcga ccaggacgcg gttctgttcc
     2701 cccccggaca ggcgcagcgc ggtgcgtttg cggaacggtg caaggcccat gcgcgcgatg
     2761 gcggcctcga tggcgtcgcg gtcggcgtcg ctgcggccgc cgccgggcca gggaatgcgc
     2821 ccaagcgcga tcagatcctc gacgctgacg ggccaggcga tttcgcgcga ttggggcaga
     2881 aaggcggccg cgcgggcccg atcgcgcgcc gtcatcgagg ccagcgagga cgcgccgctg
     2941 aaggggatca gatccagcgc ggcctccatc agcgtggatt ttccggcacc gttggggccg
     3001 atcagcccga ccacctcgcc ctcttgcaag gtcaggtcga tgccgcgcag caccgggcga
     3061 ttgcgacggg tgacggcaag gttcgcaagc gccagcagca tcagacgcgc cccccgctgc
     3121 gggttttcca gatcaggtgc aggaacagcg gcgcaccgac gatggcggtc aggacgccca
     3181 gtttcagatc gcgttcgggc aggatcagac gcaccgcgac atcggccgcc agcagcagga
     3241 tcgccccgcc aagcgccgag gccgccagca ggaccgaggg gcgcgcgccg acccaaggcc
     3301 gcatgacgtg gggaacgaca aggccgacga aaccgatcgc gcccgccacc gccgtggccg
     3361 gaccgacgat cagcgcgacg cccgcgatca tccgccagcg cagccacgga ggcgagacgc
     3421 ccatcgccgc cgccgcgcct tcgccaaggg tcagcgcatc cagcggccgc cccgccgaca
     3481 ggatcagcgc cgcgcccagc agcatgggcg gcaggaccag ccagacatgc accatcgagc
     3541 gatcggccag cgatcccatc agccagaaca cgatctcgtt ggcggcgtag ggattgggcg
     3601 acaggttcaa aaccagcgcc gtgcccgccc ccgccagcgc cgagatggcg acgccggcaa
     3661 ggatcagcgt caccgaacct ccgcgcggcc cggccagcgc caccagcagg
//
LOCUS       DTVW01000986            2177 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2212952, whole
            genome shotgun sequence.
ACCESSION   DTVW01000986 DTVW01000000
VERSION     DTVW01000986.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2177)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2177)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2177
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2212952"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..504)
                     /locus_tag="EYO87_12915"
     CDS             complement(<1..504)
                     /locus_tag="EYO87_12915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HIC66872.1"
                     /translation="MPARIRPTLLLTRPRADSLRFARLLPGWQAVIAPILRIVPVDHD
                     AARLRAAGALLFTSAHAVAAAGPGAGRAALCVGGRTAEAARKAGFDVTEGPGDAAGLL
                     PLIARWRGAPLLHPHGRHLARELPVPGMVVYEQKSCDLTDEARDLLARGGDVVLPLFS
                     ARSAALAA"
     gene            570..1637
                     /gene="tsaD"
                     /locus_tag="EYO87_12920"
     CDS             570..1637
                     /gene="tsaD"
                     /locus_tag="EYO87_12920"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013069204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HIC66873.1"
                     /translation="MDDLIFLGIESSCDDTAAAIVTGDRRILSSIVSSQTALHADFGG
                     VVPEIAARAHAERLDLVVEQALARSRLGLRDLSGVAVTAGPGLIGGVMAGVMCAKGIV
                     AGAGLPLVGVNHLAGHALTPRLTDGVDFPYLMLLVSGGHCQFLLVKGPQDFTRLGGTI
                     DDAPGEAFDKLARLLALPQPGGPSVEAEAALGDPDRFDLPRPLLDRPGCDLSFSGLKT
                     AALRLRDGLIGEQGGLRQTDRSDLCAAFQQAVTETLAEKARRALSVSPVPLLAVAGGV
                     AANGAIRAALERTALEAGARFLAPPLRLCTDNGAMIAWAGIEQFRLGQRDGMDLAARP
                     RWPLDPAAAPMLGGGRKGAKA"
     gene            1634..>2177
                     /locus_tag="EYO87_12925"
     CDS             1634..>2177
                     /locus_tag="EYO87_12925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate dehydrogenase"
                     /protein_id="HIC66874.1"
                     /translation="MKVSILGAGAFGTALAVALSANGPVVLWGRDTRWRRENPRLPGV
                     SLPEAVTVTDDLACALGARTVLLALPAQALRPFMADHGAALDGRMLVNTAKGIDLDRL
                     TGPSRIIADACPASTVATLTGPSFAADIARGLPTALTLACPRDSAGAELQRALSTRVL
                     RLYRSADLTGAELGEEVQRLR"
BASE COUNT          307 a          801 c          748 g          321 t
ORIGIN      
        1 agccgccagt gcggccgatc gtgccgagaa aagcggcagc accacatcac cgccccgcgc
       61 cagaagatcg cgcgcctcat ccgtcagatc gcagcttttc tgttcataga cgaccattcc
      121 cggaaccggc aattcgcggg caaggtgccg gccatgcgga tgcagcagcg gcgccccgcg
      181 ccacctggcg atcagcggca gcaaccccgc ggcatcgcca ggcccttcgg tcacatcgaa
      241 acccgccttc cgcgcggcct ctgcggtccg cccgcccacg cataacgccg cgcggcccgc
      301 gcccggcccg gccgctgcga ccgcatgggc cgaggtaaac agcagcgccc cggccgcgcg
      361 caagcgggcg gcgtcgtgat cgaccggaac gatccgcaag atgggggcga tcaccgcctg
      421 ccagcccggc agcagcctcg caaaccgcag cgaatccgcg cgcggtcggg tcagaagaag
      481 cgtgggccgg atgcgcgccg gcattggcaa cccctctggt cggtgctagg ccagcaggcg
      541 taagcgtcat ttccccgccc ggcaagagca tggacgacct gatttttctc ggcatcgaaa
      601 gcagctgcga cgacaccgcc gccgcgatcg tgaccggcga ccggcgcatc ctgtcctcga
      661 tcgtcagcag ccagaccgcc ctgcacgcgg atttcggcgg cgtcgttccc gaaatcgccg
      721 cgcgcgccca tgccgaacgg ctggatctgg tggtggaaca ggcgctggcc cgatcccgcc
      781 ttggcctgcg cgatctgtcc ggcgtcgccg tgaccgccgg gccgggcctg atcggcggcg
      841 tgatggccgg tgtcatgtgc gccaagggca tcgtcgcggg ggcgggtctg ccgctggtcg
      901 gcgtgaacca tctggccggc cacgccctga ccccgcgcct gaccgacggc gtggactttc
      961 cctatctgat gctgctggta tcgggcggac attgccagtt cctgctcgtc aagggaccac
     1021 aggatttcac ccgtctgggc ggcaccatcg acgacgcgcc gggcgaggcc ttcgacaagc
     1081 tggccaggct cttggccctt ccccagcccg gcggaccctc ggtcgaggcc gaggcagccc
     1141 tgggcgatcc tgaccgcttc gatctgcccc gaccgctgct ggaccggccg ggctgcgacc
     1201 tgtccttctc ggggttgaag accgccgccc tgcgtctgcg cgacggtctg atcggcgaac
     1261 agggcgggct gcggcaaacg gaccgcagcg acctttgcgc cgcctttcaa caggccgtca
     1321 ccgagaccct ggccgaaaag gcccgccgcg cgctgtcggt cagcccggtt ccgttgctgg
     1381 cggtggccgg cggtgtcgcc gcgaacggcg cgatccgcgc cgcgctggaa cggaccgcgc
     1441 tcgaggcagg cgcacgtttc ctggccccgc cgctgcggct ttgcaccgac aatggcgcca
     1501 tgatcgcctg ggcggggatc gagcagttcc ggctgggcca gcgcgacggc atggaccttg
     1561 ccgcccggcc tcgctggccc ctggaccctg cggcggcacc gatgctgggc ggcggcagga
     1621 aaggcgccaa ggcatgaagg tgtcgatcct cggcgcgggc gcctttggca cggcgctggc
     1681 ggtggcgctg tcggcgaatg gcccggtcgt cctgtggggc cgtgataccc gatggcggcg
     1741 cgaaaacccc agattgccgg gggtcagcct gcccgaggcc gtcactgtca ccgatgatct
     1801 ggcgtgcgcc ctgggcgccc ggaccgtgct gctggccctg cccgcgcagg cattgcgccc
     1861 gttcatggcc gatcacggcg ccgcgctgga cggcaggatg ctggtcaaca ctgccaaggg
     1921 aatcgacctc gaccggctga ccggcccctc gcgcatcatc gcggatgcct gtcctgccag
     1981 caccgtcgcg acgctgaccg ggccctcttt cgcggccgat atcgcgcgcg ggctgcccac
     2041 ggcgctgacg ctggcctgcc cccgcgactc tgcgggcgcg gaattgcagc gggcgctgtc
     2101 cacccgcgtc ctgcgcctct atcgcagtgc cgacctgacc ggtgccgaac tgggcgaaga
     2161 agttcagcgt ctgcgtg
//
LOCUS       DTVW01000987            1867 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2215395, whole
            genome shotgun sequence.
ACCESSION   DTVW01000987 DTVW01000000
VERSION     DTVW01000987.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1867)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1867)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1867
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2215395"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            13..441
                     /locus_tag="EYO87_12930"
     CDS             13..441
                     /locus_tag="EYO87_12930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007120729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjbQ family protein"
                     /protein_id="HIC66875.1"
                     /translation="MNHVFRIATAGPACHDLTRKAAEWLMAIDAGRGLLTLMVRHTSC
                     SLLIQENADPDVQVDLLGWLDRIAPPADDPSMTWISHRSEGPDDMPAHLKAAILPVSL
                     QIPVSGGRMMLGIWQGIYLVEHRTAPHQRQVAALFQSDPS"
     gene            complement(447..650)
                     /locus_tag="EYO87_12935"
     CDS             complement(447..650)
                     /locus_tag="EYO87_12935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018304878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dodecin domain-containing protein"
                     /protein_id="HIC66876.1"
                     /translation="MSIARVTEISATSDTGFEDAVREGLKRANETLRHVKSAWIKEQS
                     VDCEDGAISRYRVNMMVTFILDD"
     gene            complement(733..1404)
                     /locus_tag="EYO87_12940"
     CDS             complement(733..1404)
                     /locus_tag="EYO87_12940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019955628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HIC66877.1"
                     /translation="MAKTLFITGASSGIGAETAREAVKAGWNVGLFARSRDKLRDLAD
                     ELGEAALPLPGDVTDESDLAGAVADCVSRFGGIDAAFANAGRGLETPGTEKADLDDIR
                     GMIELNITGLLLTARLTLPELRKTKGTLVLTGSAAGRRHIAGSIYGATKWFVHGYAGN
                     MAEEMREWGGRCAVVAPGMVDTPFFDDGAPGKLQVQDVAAAVMHIIEAPERAAIREIH
                     LMPQS"
     gene            1564..>1867
                     /gene="nrdR"
                     /locus_tag="EYO87_12945"
     CDS             1564..>1867
                     /gene="nrdR"
                     /locus_tag="EYO87_12945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011747880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor NrdR"
                     /protein_id="HIC66878.1"
                     /translation="MRCPFCGNVDTQVKDSRPAEDNVAIRRRRFCPACGGRFTTYERV
                     QLRDLVVVKSNGRREDFDRDKMARSIRIAMQKRPVEPERIEQMISGIVRRLESTGET"
BASE COUNT          322 a          617 c          573 g          355 t
ORIGIN      
        1 tgaggcagcc gaatgaacca tgtcttccgg atcgccactg caggccctgc ctgccacgac
       61 ctgacccgca aggcggcgga atggctgatg gcgattgacg ccggccgcgg gttgctgacg
      121 ctgatggtgc ggcacacctc gtgttcgctg cttatccagg aaaatgccga tccagacgtt
      181 caggtcgatc ttctgggctg gctggaccgt atcgcaccgc cggccgatga tccgtcgatg
      241 acgtggatca gccaccgcag cgaaggcccc gatgacatgc ccgcgcatct gaaggccgcg
      301 atcctgccgg tcagtctgca gattccggtt tccggggggc gcatgatgct gggaatctgg
      361 cagggcatct atctggtcga acaccggaca gcgccgcacc agagacaggt ggcggcgctg
      421 tttcagtccg atccgtcctg accggttcag tcgtccagaa tgaacgtgac catcatgttg
      481 acgcgatagc ggctgatggc gccatcctcg caatcgacgg attgctcctt gatccaggca
      541 ctcttgacgt ggcgcagcgt ctcgttggcg cgtttcagtc cctcgcggac ggcatcctcg
      601 aagccggtat ccgaggtggc cgaaatttcg gtgacacgtg caatactcat ctcgctatcc
      661 tcctacatgc gttctcggag caggaccaac gtccggccgc gcgattggtt cgtgcggccg
      721 cttgtcggcc gatcagcttt gcggcatcag atggatttcg cggatcgccg cgcgctcggg
      781 cgcttcgatg atgtgcatca ccgccgccgc gacgtcctgc acctgcaact ttcccggcgc
      841 gccatcgtcg aagaagggtg tatcgaccat gcccggcgca acgaccgcgc accggccgcc
      901 ccattcgcgc atctcttcgg ccatgtttcc ggcatagcca tgcacgaacc acttggtcgc
      961 gccatagatc gagcccgcga tatgccgccg acccgcggcc gagccggtca gcaccagcgt
     1021 ccccttggtc ttgcgcagtt ccggcagggt cagccttgcg gtcagcagca ggcccgtgat
     1081 gttcagttcg atcatgccgc gaatatcgtc cagatcggcc ttttccgtgc cgggtgtttc
     1141 cagaccccgg ccggcattgg cgaaggccgc gtcgatgccg ccgaaacgcg acacgcaatc
     1201 cgccaccgcg ccggccaggt cggactcgtc ggtgacatcg ccgggcaggg gcagcgcagc
     1261 ctcgcccagt tcgtccgcaa gatcgcgcag cttgtccctt gatcgggcga acaggccgac
     1321 attccagccg gccttgacgg cttcgcgcgc agtctcggcg ccgatacccg aggatgcgcc
     1381 agtgatgaac agggtctttg ccatgggatg ccgcctttcg gatcatctga gtttccgccc
     1441 gccaacgcgg ctttcctgcc acatgttcca ctgcgcctat cttgtgggct gtggataaac
     1501 tctacccaaa ccctgccacc gcacctatag tggctgcgga tcgccggacc gagggaacaa
     1561 ctgatgcgct gtccgttttg cggaaatgtc gatacgcagg tcaaggattc acgcccggcc
     1621 gaagataacg tcgccatccg ccgccgccgc ttctgccccg cctgcggcgg tcgcttcacc
     1681 acttatgaac gtgtgcagtt gcgcgatctg gtcgtcgtca agtcgaacgg acggcgggag
     1741 gatttcgacc gcgacaagat ggcgcgctcg atccggatcg cgatgcagaa gcgcccggtc
     1801 gaacccgaac ggatcgaaca gatgatctcg gggatcgtcc ggcggctgga aagcaccggc
     1861 gagaccg
//
LOCUS       DTVW01000988            1761 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2215681, whole
            genome shotgun sequence.
ACCESSION   DTVW01000988 DTVW01000000
VERSION     DTVW01000988.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1761)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1761)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1761
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2215681"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(108..365)
                     /locus_tag="EYO87_12950"
     CDS             complement(108..365)
                     /locus_tag="EYO87_12950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008031990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HIC66879.1"
                     /translation="MPHLGSMPEPTAKPRTLMAGWISRLDLAMELGLSVDTLRRWEAQ
                     RMGPPCVRAGRKVYYRRAAVEDWLEEQEQAAPRRRRAGGRR"
     gene            920..>1761
                     /locus_tag="EYO87_12955"
     CDS             920..>1761
                     /locus_tag="EYO87_12955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015496841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4102 domain-containing protein"
                     /protein_id="HIC66880.1"
                     /translation="MPERIKLTEKILREAEPVPGRDYQIFDSEMRGFAVCIYRGGGRA
                     FTLDYRHAGRQRRMTFGRWPDWSVSAARERARELRREIDAGADPLALREEKREAPRVD
                     DLIERYCAEHLPKLSERSQADQRSVMAKLVAPVWGRKLVSEISQSDVDRLLTQIAEGR
                     ARPHKAKPNNRARKLQGPKPTPVRANRVGEIIRKMFTLAVQWGWCEDNPAQRFHRRME
                     TPRERFLSKEEIAKLAAALDAAEDRRAADIIRLCMLTGARLGEVRQARFEQFNLEQMS
                     WSKPP"
BASE COUNT          327 a          533 c          616 g          285 t
ORIGIN      
        1 ggcgatcgta acgaggcggt cgctgtgatg ggcggcatcg gcaatgacgg cgcgggcctc
       61 ggccacacgg tcggcgggcc agtcgggttt gtgactgagg tctgtcatca gcggcgacct
      121 ccggcgcggc ggcggcgcgg tgcagcctgt tcctgctctt ccagccagtc ctcgacggcg
      181 gcgcggcggt aatagacttt tcgcccagcg cggacgcagg gcggtcccat gcgctgggct
      241 tcccagcgcc gcagcgtgtc gaccgagagg ccgagttcca tggcgaggtc caggcggctg
      301 atccagccgg ccatcagggt gcggggtttt gcggtcggtt ccggcatcga tccgagatgc
      361 ggcatcgggg tctccatcat tgctgtggag gcgattgagc gcagatgccg aagggtggcg
      421 gcgaggcgga gggtggcaca aagattgccg tcttcgtgcc accccatgtt ttgctgggtt
      481 tggtacgtgt cgggagatgg aacggggcag ggtggcggcg accgaggatc tcggtcggat
      541 tgacgtcaaa gcggcagaca ggtgcgaaca gccggaaatg tcggcattga gcggcattgg
      601 cgggcaaaga gagggtggca tccggcacgg aaccgcgcca cccattggaa tcattcggga
      661 tttacaaatt caggtcggcg agacgcgtga aaacgcatgg tccacgctga gatcccggtg
      721 gtgcggttca gatcgggcag ggccacagct cgccttcaat tgctcgcctg atcgtagaaa
      781 gcccagcaaa acaaggggtg gcgcgacgat ggcgacgttt atgccactct ccgccttcct
      841 gcctcccggg ttcccatgct tggcttgata gagccgcgga accacgcctc atgtcggatg
      901 ccagaaggac cgaacgacca tgcccgaacg catcaagctg accgaaaaga tcctgcgcga
      961 ggccgagccc gtgccggggc gggattatca gatcttcgac agcgaaatgc gcggttttgc
     1021 cgtctgcata tatcgcggcg gcgggcgcgc cttcacgctg gattaccgcc atgccggacg
     1081 ccagcgccgg atgaccttcg ggcgctggcc ggactggtcg gtttcggcag cgcgggaacg
     1141 ggcaagggaa cttcgccgcg agatcgatgc cggcgccgat cccttggccc tgcgcgagga
     1201 gaaacgcgag gcaccccgcg tcgacgatct tatcgaacgc tactgcgccg agcatctgcc
     1261 gaaactgtcg gaacgcagtc aggccgatca gcgctcggtg atggcgaaac tggtcgcccc
     1321 cgtctggggg cggaagttgg tgtcagaaat cagccagagc gatgtcgaca ggctgctgac
     1381 acagatcgcc gagggccggg cccgcccgca caaggcgaaa ccgaacaacc gggcgcgcaa
     1441 attgcagggg ccgaaaccga cgccggtccg cgccaaccgg gtcggagaga tcattcgaaa
     1501 aatgttcacg ctggcggtgc aatggggctg gtgcgaggac aatcccgccc agcgctttca
     1561 tcgccgcatg gaaaccccgc gcgagcggtt cctgtccaag gaggaaatcg ccaaacttgc
     1621 cgcagcgctg gatgccgccg aggaccggcg cgccgccgac atcatccggc tctgcatgct
     1681 gaccggcgcc cggctcggcg aggtgcggca ggcccgcttc gaacagttca acctcgagca
     1741 gatgagctgg tcgaaaccgc c
//
LOCUS       DTVW01000989            3732 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2215842, whole
            genome shotgun sequence.
ACCESSION   DTVW01000989 DTVW01000000
VERSION     DTVW01000989.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3732)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3732)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3732
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2215842"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..687
                     /locus_tag="EYO87_12960"
     CDS             <1..687
                     /locus_tag="EYO87_12960"
                     /inference="COORDINATES: protein motif:HMM:PF08548.9"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine 3-dehydrogenase"
                     /protein_id="HIC66881.1"
                     /translation="LDRGQMSVPILLTIWDGGGRDMLNLSRDSHDQRIDLRPGAFSDV
                     LGWKGTLGIAYGTAIEDARGGRGADWVIGNGTANRIWGHQGDDQLRGGGGRDRLHGGY
                     GDDTLLSGTGNDTLNGYAGDDVLSGQAGDDLLIGGGGADRFVFRLRGDNGHDRIADFT
                     PGEDVLDLRWLGLERIAHGTGGLYEGLLRIVERGADVVLRADLDQDGRAELDILLRDG
                     GDVGRDDLLI"
     gene            complement(684..1775)
                     /locus_tag="EYO87_12965"
     CDS             complement(684..1775)
                     /locus_tag="EYO87_12965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011751258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HIC66882.1"
                     /translation="MFLGGSPMPFCRFRRALIERLVADHDCRVLCAYWGDDRDGFFAP
                     FPATGVSWHDLGGDHASPPGAGDLAPMARLFRLIRRHRPEVICCFNAKPIVLGPAVAR
                     LARRRARIVALMEGLGSALAFLRAESGARRRLFRALTGPVDRWVLLNERDAGLIARLH
                     PARAAQDIATLPGIGIDPDHFRPAADPLAARRLIFVGRLVPEKGLDTFLSLARHLEGG
                     GWRFAAAGLPTPRGIPEDRIRGWLDQGLLESCAPVRDMAAFYRRASVLVFPSRYEEGL
                     PAVIMEAQASGLPCLVRDAASLRDAIGDGETGFFVPGDDPADWAAALRRLEDPATFAA
                     LSAAARDRAVTRFGQDRINARLTRLLLEG"
     gene            1872..2864
                     /locus_tag="EYO87_12970"
     CDS             1872..2864
                     /locus_tag="EYO87_12970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011751259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4422 domain-containing protein"
                     /protein_id="HIC66883.1"
                     /translation="MDSDSGPKTGPGTVAGAEAATGTAGRARILIACHAAAAAVPAGP
                     YLLPIHVGRALAGAALPGMIGDDTGDSISALNPEYCELTAHYWAWRNLPGDGPVGLMH
                     YRRLFDLAGRLNGHFHAERHVPDFDPSAWHEDVAARLARPAEPLLIVPRPARLSLPLG
                     LHYRVFHHAADLAVLRAVAAERHPGFAPDLARALRGNRFVMGNMFVMSRPVLDHYSAL
                     LFDILAETRRRRGGRPAGQAGGQAGGGYQRRWLGFLGERIMTAYVLGDHLRRAFPGLR
                     PDFRGIVNIDAGIARRAGALRLARFCLQRRIAPTDAWRAWRGLPESAGRGLDGS"
     gene            2919..>3732
                     /locus_tag="EYO87_12975"
     CDS             2919..>3732
                     /locus_tag="EYO87_12975"
                     /inference="COORDINATES: protein motif:HMM:PF00132.22"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CatB-related O-acetyltransferase"
                     /protein_id="HIC66884.1"
                     /translation="MKLSFKAAKLLDDCRIEPFDGPTRRRFRAMADLQVARNLQCEAF
                     SRHPPGFLMSLGAFSYVSGATRDMLKLRAGRFCSIARGVNVVSGNHPVAAVSTSPFFY
                     GHYHARHLPEVVNAVGKPDFTRDLGGVRVGDDVWIGGYCVLKGGIRIGTGAVVAAGSV
                     VVRDVDPYTIVGGNPARVIRPRFDPEQAARLLDSAWWQVDPKCLRGLFSTRPSETQSL
                     TNGDGVSFFSYQRLFRERGASVIDNNIRPLRCLCCDQTAEARSLRSSYRLEWS"
BASE COUNT          542 a         1260 c         1361 g          569 t
ORIGIN      
        1 ctggaccggg gccagatgtc ggtgccgatc ctgctgacca tctgggacgg cggcgggcgc
       61 gacatgctga acctgtcgcg cgacagccac gaccagcgca tcgatctgcg ccccggcgcc
      121 ttttcggacg tgctgggctg gaagggcacg ctgggcatcg cttatggcac cgcgatcgag
      181 gatgcgcgcg gcggtcgggg cgcggactgg gtcatcggca acggcaccgc gaaccggatc
      241 tggggccatc agggcgacga ccagttgcgc ggcggcggcg gccgtgaccg gctgcatggc
      301 ggatatggcg acgataccct gctgtcgggg accggcaacg acacgctgaa cggctatgcc
      361 ggcgacgacg tgctgtcggg ccaggcgggc gacgacctgc tgatcggcgg cggcggcgcg
      421 gatcgcttcg tcttccgcct gcggggcgat aacggccatg accggatcgc cgatttcacc
      481 ccgggcgagg acgtgctgga tctgcgctgg ctggggctgg agcggatcgc ccatggcacg
      541 ggcgggctgt acgagggcct gttgcgcatc gtcgagcggg gcgccgatgt cgtgctgcgc
      601 gccgatctgg atcaggacgg ccgcgccgaa ctggatatcc tgttgcgcga tggcggcgat
      661 gtcgggcgcg acgatctgct gatctagcct tccagcagca gccgggtcag ccgggcattg
      721 atgcggtcct ggccgaaccg cgtcaccgcc cggtcccgcg ccgcggccga cagcgccgcg
      781 aaagtcgcgg gatcctccag tcgccgcagc gcggcggccc agtcggccgg atcgtcgccg
      841 gggacgaaaa accccgtctc gccatcgccg atcgcgtcgc gcagggatgc ggcgtcgcgg
      901 accaggcagg gcaggccgct ggcctgcgcc tccatgatca cggccggcag cccctcttcg
      961 tagcgcgagg gaaagaccag caccgaggcg cggcgataga acgccgccat gtcgcggacc
     1021 ggggcgcagg attccagcaa tccctggtcc agccagccgc ggatccggtc ttccgggatg
     1081 ccgcggggcg tgggcaggcc cgccgccgcg aaacgccagc cgccgccctc caggtgccgg
     1141 gccagcgaca ggaaggtgtc gagtcccttt tccggcacca ggcggccgac gaagatcagc
     1201 cgccgcgcgg ccagcggatc ggcggcgggg cggaaatgat ccggatcgat gccgatgccg
     1261 ggcagggtcg cgatgtcttg tgccgcgcgg gccggatgca gccgcgcgat cagccccgcg
     1321 tcacgctcgt tcagcagaac ccagcgatcc acggggccgg tgagggcgcg gaacaggcgg
     1381 cgccgggcgc cggattcggc ccgcaggaag gccagcgcgc tgcccagccc ctccatcagc
     1441 gccacgatcc gggcacggcg ccgggccagg cgggccacgg ccgggcccag cacgatgggc
     1501 ttggcgttga agcagcagat cacctccggg cgatggcggc ggatcaggcg gaacagccgc
     1561 gccatcgggg ccagatcgcc ggcgccgggg gggctggcat gatcgccgcc cagatcgtgc
     1621 cagctgaccc ccgtcgccgg gaagggggcg aagaagccgt ccctgtcatc gccccaatag
     1681 gcgcagagaa cgcggcaatc gtgatcggcg accagccttt cgatcagggc gcggcgaaag
     1741 cggcagaagg gcatcgggct gccgcccagg aacatcaccg tccgccgccc gtccgccatg
     1801 gccctgttcc tttccccgcc cgcgcttgct aacgctgagc gcgcgcccgt tgttacgcga
     1861 aggatgaggc catggacagc gatagcgggc caaaaacagg gccaggaaca gtggcggggg
     1921 ccgaggctgc gaccggaacg gcagggcgcg cgcggatcct gatcgcctgc cacgcggcgg
     1981 cggcggcggt gccggcgggg ccgtatctgc tgccgatcca tgtcggccgg gcgctggccg
     2041 gggcggcgct gcccggcatg atcggcgatg atacggggga cagcatctcg gcgctgaacc
     2101 ccgaatattg cgaattgacg gcgcattact gggcctggcg caacctgccc ggcgacgggc
     2161 ctgtcgggct gatgcattac cgccgcctgt tcgaccttgc aggccggctg aacgggcatt
     2221 tccatgccga acggcatgtc cccgatttcg acccatccgc ctggcacgag gatgtcgccg
     2281 cgcgcctggc ccgcccggcc gaacccctgc tgatcgtgcc ccgtccggcg cggctgtcgc
     2341 tgccgctggg attgcattac cgggtctttc accacgccgc cgatctggcg gtgctgcgcg
     2401 ccgtggcggc cgagcggcat cccggattcg cccccgatct ggcccgcgca ttgcgcggca
     2461 accgctttgt catgggcaac atgttcgtca tgtcgcggcc ggtcctggat cattacagcg
     2521 cgctgctgtt cgacatcctg gccgagacgc gccgccggcg gggcgggcgt ccggccgggc
     2581 aggcgggggg gcaggcgggc gggggctatc agcgccgctg gctgggcttt ctgggcgaaa
     2641 ggatcatgac cgcctatgtg ctgggcgatc acctgcgccg ggcctttccg gggctgcggc
     2701 cggatttccg cggaatcgtg aatatcgacg cgggcattgc gcgccgggcc ggcgcgctgc
     2761 ggctggcccg gttctgcctg cagcgccgca tcgcgccgac ggatgcatgg cgggcctggc
     2821 ggggcctgcc tgaaagcgcc ggccggggcc tggacgggtc ttgaacgggg ccggccgctg
     2881 gggcagtctc gccccctctt cagccggatg cggatgcgat gaaactgtcc ttcaaggccg
     2941 cgaaacttct cgacgattgc cggatcgagc ctttcgacgg tcccacccgc cgccggttcc
     3001 gggccatggc cgacctgcag gtcgcaagga acctgcaatg cgaggcgttt tcgcgccatc
     3061 cgcccggatt cctgatgtcg ctgggggcgt tcagctatgt ctcgggggcc accagggaca
     3121 tgctgaagct gcgggccggg cgcttttgca gcatcgcgcg cggggtcaac gtggtctcgg
     3181 gcaatcaccc ggtcgcggcg gtctcgacca gcccgttctt ctatggccat taccatgccc
     3241 ggcacctgcc cgaggtggtg aacgcggtcg gaaagcccga tttcacccgc gacctgggcg
     3301 gggtccgggt gggcgacgat gtctggatcg gcggctattg cgtgctgaag ggcggcatcc
     3361 gcatcggcac cggcgcggtc gtcgccgccg gcagcgtggt ggtcagggat gtcgatccct
     3421 ataccatcgt cggcggcaat ccggcccggg tcatccgccc ccgcttcgat ccggaacagg
     3481 ccgcccggct gctggacagc gcctggtggc aggtcgatcc gaaatgcctg cgcgggctgt
     3541 tttccactcg gccaagcgaa actcaatcgc tgaccaacgg ggatggcgtg tcttttttta
     3601 gctatcagag attgtttcgg gaaagggggg cttctgttat cgataacaac atccgccctc
     3661 tccgttgcct gtgctgtgat cagaccgccg aagcccgctc cctgagatcc tcgtacagac
     3721 tcgagtggtc aa
//
LOCUS       DTVW01000990            1483 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_221608, whole
            genome shotgun sequence.
ACCESSION   DTVW01000990 DTVW01000000
VERSION     DTVW01000990.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1483)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1483)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1483
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_221608"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..693)
                     /locus_tag="EYO87_12980"
     CDS             complement(<1..693)
                     /locus_tag="EYO87_12980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HIC66885.1"
                     /translation="MRILVTGGAGFIGSAVVRRAIERGHQVVNLDALTYAANPANVAS
                     VAGNPRYFFEKADIRDRAALDRVIARHRPEAIMHLAAESHVDRSIDGPAAFIETNILG
                     TFNLLESARAYWVARGRPDHFRFHHISTDEVFGSLGNEGQFIEDTPYDPRSPYSASKA
                     GSDHLARAWHETYGLPVVLTNCSNNYGPFHFPEKLVPVVILRALAGQSIPVYGDGGNI
                     RDWLYVEDHADAL"
     gene            complement(690..1250)
                     /gene="rfbC"
                     /locus_tag="EYO87_12985"
     CDS             complement(690..1250)
                     /gene="rfbC"
                     /locus_tag="EYO87_12985"
                     /EC_number="5.1.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose 3,5-epimerase"
                     /protein_id="HIC66886.1"
                     /translation="MYIEKTDLDGVLIITPIRHGDDRGFFSESWSRKSLLEAGIDLPE
                     FVQDNHSLSSHAGTLRGLHYQAPPHAQGKLVRCGRGRLFDVAVDARQGSPDFGRWIGV
                     ELSFANGRQIWIPAGFLHGFVTREPETEIVYKCTDYYDRASDGVVRWDSLGIDWSVAD
                     PVLSQKDAAAPAFGDWTSPFALGEPG"
     gene            complement(1371..>1483)
                     /locus_tag="EYO87_12990"
     CDS             complement(1371..>1483)
                     /locus_tag="EYO87_12990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011909687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66887.1"
                     /translation="DLVEGLNSLGVRPRDMIDILKSIHAAGALHADLIVE"
BASE COUNT          323 a          455 c          413 g          292 t
ORIGIN      
        1 caaggcatcg gcatggtcct cgacgtagag ccaatcgcgg atgtttccgc catcgccgta
       61 gacgggtatg ctttgtcctg caagtgccct gagaatgacg accggaacca gcttttcggg
      121 aaaatgaaaa ggcccgtagt tgttcgaaca attcgtgaga acgaccggca ggccataggt
      181 ctcgtgccat gcccttgcca gatgatcgga gcctgccttg cttgccgaat agggactgcg
      241 cggatcatag ggcgtgtcct cgatgaattg tccttcattg ccgagactgc cgaaaacctc
      301 gtcggtcgag atgtgatgga agcggaagtg atccggccgc cctcgggcga cccaataggc
      361 ccttgccgac tccagcagat tgaaagttcc cagaatattc gtctcgatga aggccgcagg
      421 tccgtcgatc gaacgatcga catgactttc agccgcgagg tgcatgatcg cctctggacg
      481 gtggcgggcg atcacgcgat caagcgccgc ccggtcgcga atgtccgcct tttcgaaaaa
      541 atagcgcgga tttcccgcga cactcgcaac atttgccgga ttcgcagcat aggtaagcgc
      601 atcgaggttc acgacctggt gcccgcgttc gatagcccgc ctcacaacgg ctgagccgat
      661 gaaaccggcg ccgccggtga caagaatcct catcccggtt ccccgagcgc aaatggactc
      721 gtccagtcgc cgaaggcagg ggctgcggca tccttttgcg acagaacggg atccgccaca
      781 ctccaatcga tccccaggct gtcccagcgg acgacaccgt cgctggcacg atcataataa
      841 tcagtacatt tgtagacgat ttcggtttcg ggttcgcgcg tcacgaaacc atgcagaaag
      901 cccgccggga tccagatctg ccggccgttt gcaaaggaaa gctcgacccc gatccagcgc
      961 ccgaaatccg ggctgccttg ccgggcatcc acggcgacgt cgaaaagccg tccgcgaccg
     1021 caacggacaa gttttccctg cgcatgtggt ggcgcctgat agtgaagccc gcgcagtgtt
     1081 ccggcatgcg aagacaggga atgattgtcc tgaacgaatt cgggaagatc gatacctgcc
     1141 tcgagcagcg actttctgct ccagctttca gagaagaacc ccctgtcgtc accatgccgg
     1201 atcggggtga tgatcagcac gccatccaag tcggtcttct cgatatacat gctgatgcca
     1261 tcaatcgctt tcccgcggat ccaacctcaa aacagctgga acttcaaccg cggagagggc
     1321 ctgatccgac ctgccgcttc cgacttcgcc gattcgcctt catccggacc tcattcgacg
     1381 atcagatcgg catgaagcgc ccctgcggca tggatcgatt tcagaatatc gatcatgtcg
     1441 cgtggcctga cgcccagtga attcagccct tcgacaagat cgc
//
LOCUS       DTVW01000991            3757 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2216621, whole
            genome shotgun sequence.
ACCESSION   DTVW01000991 DTVW01000000
VERSION     DTVW01000991.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3757)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3757)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3757
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2216621"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..176)
                     /locus_tag="EYO87_12995"
     CDS             complement(<1..176)
                     /locus_tag="EYO87_12995"
                     /EC_number="2.3.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017997916.1"
                     /note="catalyzes the formation of 2-isopropylmalate from
                     acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HIC66888.1"
                     /translation="MSDENRVFIFDTTLRDGEQSPGATMSHAEKLEIAQMLDEMGVDI
                     IEAGFPIASEGDFAA"
     gene            576..1010
                     /locus_tag="EYO87_13000"
     CDS             576..1010
                     /locus_tag="EYO87_13000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014873801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HIC66889.1"
                     /translation="MSRKIVVGYDGSEASRRALDFAISRAGAQGDSIIIAHVLEWSPY
                     SFLTPNEIEERHQRRKEELQRAEEMLIQPMVRLVEAEGIPVSTAMRYGHIAETLCKIA
                     QDENAALIFIGRMGHSGFTSRIFGSVAGTLAQASPVPVTIVP"
     gene            1034..2581
                     /locus_tag="EYO87_13005"
     CDS             1034..2581
                     /locus_tag="EYO87_13005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005863537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine:cation symporter family protein"
                     /protein_id="HIC66890.1"
                     /translation="MTHFAKRLGVPAALATLAATGPAAAQGLDEAVNSVFASSTGWFV
                     SFIFSSFPGTSFPWIVGWLVVAATIFTIYFGFIQFRAFGHSIALVRGDYSDPNDAGEV
                     SHFQALATALSGTVGLGNIAGVAVAIGIGGPGATFWMILAGLLGMASKFTECTLGVKY
                     RNEYEDGHVSGGPMYYMTKGFSERGVGGGKVLAVLFSIFCILGAFGGGNMFQSNQAHA
                     QLANVFGDYPGWITGLVFALIVFMVIVGGIKAIAQVTERVVPFMGILYVGTALIIILL
                     NYDQIGNAFGQIFRGAFTWDGAVGGATGALIQGFRRAAFSNEAGVGSAAIAHSAVRTN
                     EPITEGFVSLLEPFIDTVVICTMTALVIIITGQLVTDPQTGMFVLNESGDAIQTLSGN
                     SGVALTSAAFSESFGWFRYILALAVVLFAFSTMISWSYYGLKAWTFLFGEGRTKELVF
                     KVIFCIFTWIGAAASLGPVIDFSDAMIFSMAVVNIIALYVLMPVVKTEMNSYLSRLRS
                     GEIRKFA"
     gene            complement(2672..3370)
                     /locus_tag="EYO87_13010"
     CDS             complement(2672..3370)
                     /locus_tag="EYO87_13010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylcholine synthase"
                     /protein_id="HIC66891.1"
                     /translation="MQPRYKALLVHLLTATGAVLSMLAMLAAVNAEWSMMFLWLVAAF
                     AVDGVDGPLARRYDVRVNWPTYDGVLMDLIIDYLTYVFIPAFALFKSGLLSGWTGWFA
                     IIVITYGSVIYFADTRMKTRDYSFAGFPGCWNMVVLVLFAVKPHWTVILAIIVALTVA
                     MFSNIKFIHPVRTERWRAISLPVAIAWVIFAVRAAWVDFHPSSWAIWGLVVTTLWLIL
                     AGAAQQLLDRRIRP"
BASE COUNT          683 a         1189 c         1217 g          668 t
ORIGIN      
        1 gcggcgaaat cgccttcgct ggcgatcgga aagccggcct cgatgatgtc cacgcccatc
       61 tcgtccagca tctgggcgat ttccagcttt tcggcgtggg acatggtcgc gccgggcgat
      121 tgttcgccgt cgcgcagggt ggtgtcgaag atgaagacgc ggttctcgtc gctcatgggt
      181 ctgtctttct tgcgctgtcc ggtatcggga atatccgggc gccgacctga ctgagcggcg
      241 gcccggaaga cccgctcagc gcagcgtaag aagcagcaga ccgcggagat tgacggccag
      301 acgcgcgcca aagggcgcgg tcgcggcggt cgggatatgc agcatccggg tcatggccgc
      361 gactatgccg cccgcgggcc ggcttgaaaa gcgaaaaatc gccgtccagg accgtgcagc
      421 acggcgcggc cggtagcgcc aatccgccgg cgtgaaaggt cattcacggt ttcgtcatct
      481 ttttgctggc cgctgccccg gtcatttgcc tatcatttga tgatcgacgc agaagcgagc
      541 accgaaaaac cacgaagcaa cggaaagggg gattcatgtc acgcaagatc gtcgtcggtt
      601 atgacggcag cgaggcgtca cgccgcgcgc tggactttgc gataagtcgg gccggcgcgc
      661 agggggacag catcatcatc gcgcatgtcc tggaatggtc gccctacagt ttcctcacgc
      721 ccaacgagat cgaagaacgt caccagcggc gcaaggaaga attgcagcgc gccgaagaga
      781 tgctgatcca gccgatggtc aggctggtcg aggccgaagg gattccggtc tcgaccgcga
      841 tgcgctatgg ccacatcgcc gagacattgt gcaagatcgc gcaggacgaa aacgcggcgc
      901 tgatcttcat cggacgcatg ggccattcgg gcttcacctc gcgcatcttc ggatccgttg
      961 cgggcacgct ggcgcaggca tcgccggtgc cggtgacgat cgtgccatga gccacgggac
     1021 aaggagattt gacatgaccc atttcgcaaa acgactgggc gtcccggcgg cgcttgcaac
     1081 cctggccgcg acaggacccg cggcggccca ggggctggac gaggccgtca acagcgtctt
     1141 cgccagttcg accggctggt tcgtcagctt catcttttcc agctttccgg gcacctcctt
     1201 cccctggatc gtcggctggc tggtggtcgc ggcgacgatc ttcaccatct atttcggctt
     1261 catccagttc cgcgccttcg gccattccat cgcgctggtc cggggcgatt attccgaccc
     1321 caacgacgcg ggcgaggtca gccacttcca ggcgctggcc acggcgctgt cgggcacggt
     1381 cgggctgggc aatatcgccg gcgtcgcggt cgccatcggc atcggcggtc cgggcgcgac
     1441 cttctggatg attctggcgg gtcttctggg catggcatcg aaattcaccg aatgcacgct
     1501 gggcgtgaaa taccgcaacg aatacgaaga cggccacgtt tcgggcgggc cgatgtatta
     1561 catgaccaag ggcttttccg aacgcggcgt cggcggcggc aaggtgctgg cggtcctgtt
     1621 ctcgatcttc tgcatcctcg gcgccttcgg cggcggcaac atgttccagt ccaaccaggc
     1681 ccatgcccag cttgccaatg tcttcggcga ctatccgggc tggatcaccg gactggtctt
     1741 cgcgctgatc gtgttcatgg tcatcgtcgg cggcatcaag gcgatcgcgc aggtgaccga
     1801 acgtgtcgtt cccttcatgg gcatcctcta tgtcggcacg gcgctgatca tcatcttgct
     1861 gaactacgac cagatcggaa acgccttcgg ccagatcttc cgcggggcct ttacctggga
     1921 cggcgccgtc ggcggggcca ccggggcgct gatccagggt ttccgccgcg ccgccttttc
     1981 caacgaggcc ggcgtcggct cggccgcgat cgcccattcg gccgtgcgca ccaacgagcc
     2041 gatcaccgaa ggcttcgtgt cgctgctgga gcccttcatc gacaccgtcg tgatctgcac
     2101 catgacggcg ctggtcatca tcatcaccgg ccagctggtc accgatcccc agaccggcat
     2161 gttcgtgctg aacgagtcgg gcgacgcgat ccagacgctc agcggcaata gcggcgtggc
     2221 actgacctcg gcggccttca gcgaaagctt cggctggttc cgctatatcc ttgcgctggc
     2281 ggtggtgctg ttcgcctttt cgacaatgat ctcgtggagc tattacggcc tgaaggcctg
     2341 gaccttcctg ttcggcgagg gccggaccaa ggaactggtc ttcaaggtga tcttctgcat
     2401 cttcacctgg atcggcgcgg cggcgagcct ggggccggtc atcgacttct cggatgcgat
     2461 gatcttctcg atggcggtcg tcaacatcat cgcgctctat gtgctgatgc cggtcgtgaa
     2521 gaccgagatg aacagctatc tctcgcggct ccggtcgggc gagatcagga agttcgcctg
     2581 agacgggacc ggcggggggc cagccccccg caccccccga ggtattggga aagagtgcga
     2641 ggggggcgga cgtcttgtcc gccccctgcg ttcagggccg gatgcggcga tccagaagct
     2701 gctgggccgc gcccgccagg atcagccaca gcgtcgtcac caccaatccc cagatcgccc
     2761 agctcgaggg gtggaaatcg acccatgccg cgcggacggc aaagatcacc caggcgatgg
     2821 ccacgggcag cgagatcgcg cgccagcgtt cggtgcgcac cgggtggatg aacttgatgt
     2881 tgctgaacat cgcgacggtc agcgccacga tgatggccag gatcaccgtc cagtgcggct
     2941 tgaccgcgaa caggaccaga acaaccatgt tccagcatcc cggaaagccc gcgaaggaat
     3001 aatccctggt cttcatccgc gtatccgcga aatagatcac gctgccatag gtgatgacga
     3061 tgatcgcgaa ccagccggtc cagccgctga gaagcccgga tttgaacaac gcgaaggccg
     3121 gaatgaagac ataggtcaga taatcgatga tcagatccat cagcacgccg tcataggtcg
     3181 gccagttgac cctgacatcg tatcggcgcg ccagcgggcc atcgacgcca tcgacggcga
     3241 aggcggcgac cagccacaga aacatcatcg accattccgc gttgaccgcc gccagcatcg
     3301 ccagcatcga cagcaccgcg cctgtcgcgg tcagaagatg gacaagaagg gccttgtatc
     3361 gcggctgcat ccatcccttc tgtcagtttg gcgacgacgg tgcaacaatc ctgcgtcacg
     3421 gcgcggggcg aaaccgacgc gacgatcagc gcaggatcgg cggccctttc gggcctttcg
     3481 gcaggtcggg gaggacgtcc ggcggcaggt cgaatcgcag cgcgccggtc ggaggaacgg
     3541 tttcggaaaa gctgatatcg acaccgccgg gctgcggcgg caggaaggcc agcgtttcgg
     3601 ccagggcctt ggcgatggcg ggctggtggt ccggcgacgc ccccgaaatc agcagcagat
     3661 gtccggcccg gcccgcgata cccgcaaggg ctgcgccgga taccaggccg cgcagatcgg
     3721 acagccgcgc cgccaggggt tcggccagcg ccgcgac
//
LOCUS       DTVW01000992            1124 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2217095, whole
            genome shotgun sequence.
ACCESSION   DTVW01000992 DTVW01000000
VERSION     DTVW01000992.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1124)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1124)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1124
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2217095"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(388..>1124)
                     /locus_tag="EYO87_13015"
     CDS             complement(388..>1124)
                     /locus_tag="EYO87_13015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012178352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF4445 domain-containing protein"
                     /protein_id="HIC66892.1"
                     /translation="IDPVTKEPRFRVIGVEPWSDQPDFAEAVRGVGITGICGSGIIEA
                     VAEMRMAGIVDPGGLIGSAEQVGTSRCIAQGRTHSYLLHDGSAENGAVIAVTQGDIRA
                     IQLAKSALYAGARLLMDEFGIDRLDRVVLAGAFGAHISPLHALVLGMIPDCAPERVTS
                     AGNAAGTGARIALCSRAARAEIEAEVRRITRVETAIAPRFQEHFVAANAIPHASDPFP
                     ELSRVVSLPAPSFNAGDGGRPRRRRR"
BASE COUNT          174 a          386 c          383 g          181 t
ORIGIN      
        1 cgcgtaatcg agataggacg tgcgcatctc ggccgaaatg tcgatgacgg ggccgtcatg
       61 agccattacc acccgttcag gcgcgccgtt ttcgtcacca ttgtcagggg tttcgggcag
      121 atcgtcttct ggtgtgtcgg ccacgctggt tcctcaacat cttgtcgagt gacggtatag
      181 ccgagggcgc gcgcgggggc aatcttcggc cgccttctgc ggtctggccg ggccatgggc
      241 gcggcgccat ccagcaagcg ggtcggggcc tgcgaccgcg cgcggttggg ggccggcctc
      301 cccggcatcg ccgccggcgg cgacgctgtt gcgcgctgct tgctgtcagt ccagtgacat
      361 ccgcacaagg tcgatccgtg cgatcggcta tcggcgccgc cggcgcgggc ggccgccgtc
      421 accggcattg aaggagggcg caggaaggct gaccacgcgg gacagttcgg ggaacggatc
      481 gctggcatgg ggaatcgcgt tggcggccac gaaatgttcc tgaaagcgcg gcgcgattgc
      541 ggtttcgacg cgcgtgatgc ggcgcacctc ggcctcgatc tcggcacggg ccgcgcgcga
      601 acacagcgcg atccgcgcgc ccgtcccggc ggcgttcccg gcgctcgtca ccctttcggg
      661 cgcacaatcg gggatcatcc ccagaaccag cgcgtgcagg ggcgagatat gcgccccgaa
      721 ggcccccgcc agcacaaccc ggtccagccg gtcgatgccg aattcgtcca tcaacagccg
      781 cgccccggcg taaagcgccg atttcgccag ttggatcgcg cggatatccc cctgggtcac
      841 ggcgatcaca gcgccgttct cggcgctgcc gtcatgaagc agataggaat gggtgcgacc
      901 ctgcgcgatg cagcgcgacg tgccgacctg ttcggccgat ccgatcaatc cgcccggatc
      961 gacgatcccg gccatccgca tctcggccac cgcctcgatg atgccggacc cgcagatgcc
     1021 ggtaatgccg acgcccctga cggcctcggc aaagtccggc tggtcggacc acggctcgac
     1081 gccgatgacg cgaaaacgcg gctccttggt cacggggtcg atcc
//
LOCUS       DTVW01000993            2298 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2217561, whole
            genome shotgun sequence.
ACCESSION   DTVW01000993 DTVW01000000
VERSION     DTVW01000993.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2298)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2298)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2298
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2217561"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            108..1118
                     /locus_tag="EYO87_13020"
                     /pseudo
     CDS             108..1118
                     /locus_tag="EYO87_13020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008205407.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
     gene            1153..1935
                     /locus_tag="EYO87_13025"
     CDS             1153..1935
                     /locus_tag="EYO87_13025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018063698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IclR family transcriptional regulator"
                     /protein_id="HIC66893.1"
                     /translation="MDSAGKVAETGGDKAPQNNLRPLYILKTVAEAAAPVSAAELGEA
                     LDLPKPTIHRLLQTLEHDGWLMRDLGGRGYVAGHLLRRLAANTFSGPGLRRERMAILK
                     GLAEAIGETCNISMPDGDAMVYVDRVETHWPLRIRLPIGTRVPLHCTSAGKTYLSTLP
                     PAQFTRLLGRLTLAARTPHSITTPLALADEIALTRERGHGEDDQEMVEGMIALAVPIR
                     DHLDRVFGTLSFHAPVQRLTLDAARQHLPLLKQTARDLADTL"
BASE COUNT          320 a          795 c          751 g          432 t
ORIGIN      
        1 gatgccttct ttcacctgtt tcttcccagg gaatccatgc cgatctgaca accgacaacg
       61 gaggcaagca tacccgcaat cctgtattga tacaagttat tttataggcc accacggcca
      121 cgatcggctc gatgatgcat cccgagatgg tgaagggcgg ctatgacacg cgcttcgccg
      181 ccgctactgc cgcagccggc ggcacggtgg ggatcatcat cccgccctcg atcatcttca
      241 tcgtctatgg cttcctgatg aacctgccga tctcggacct tttcgtggcg gggatcattc
      301 ccggcgtgat gatggtcctg gcgatgcagt tcgtctgctg gctcatgtcg cgcatccatg
      361 gctggggcca catcatcccc ttcgacatgg gccgcgtgct gcgcaccgcg ttcggtgcct
      421 ggctgggctt cttcgccatc gggctggtgc tgtggggcat ctatacgggc aagttctcgc
      481 ccaccgaggc cgccgccgtc accgtgggat tctgcgtgat cgtgggcgtc ctcagccgct
      541 ggctgtttcc gctggtcgca tccggcatgg atgagcacgg ccggccccgg acctatgccg
      601 ccagcatcct ggtcgagggt ttccgcatcc gcgacctgcc ctcggtgacg atgcgttcgg
      661 cgcagatcac gggcatcctt gcgccactga tcgggatctc ggtggtgatg cagcagatcc
      721 tgtcgctgct gggcgcgcag gaggcaatcg gacaatgggt ctctggcctg ggcggatact
      781 gggtcatgct ggccgcctcg atggcgatca tcttcgtcgc ggggatggtg ctggaaagcc
      841 tgccggtcac gatcatcctg gcgccgatcc tcgcgcccct ggccgccgcc aacggcatgg
      901 atccggtcca tttcgcggtg atcttcctgg tcggcgcctc gatcgggttc gtgaccccgc
      961 cctacgggct gaacctctat gtcgcctcca gcgtgaccgg ggttccctac atgcggctgc
     1021 tgcgttatgc gctgtattac cttgcggcgc tgctgagtgt ctggatcatc gtggctgtca
     1081 cgccgtcgct ggccacgatc ctgctgccgt cgcggtgaag gaccggatat ggcgcgaatg
     1141 cgggcgggcg acatggacag cgcgggcaag gttgcagaga cgggcggcga caaggcgccg
     1201 cagaacaacc tgcgcccgct ctatatcctg aaaaccgtgg ccgaggccgc ggccccggtt
     1261 tcggccgccg aactgggcga ggcactggat ctgcccaaac ccaccatcca ccggctgttg
     1321 cagaccctgg aacatgatgg ctggctgatg cgcgatctgg gtgggcgcgg ctatgtcgcg
     1381 gggcatctgc tgcgccgtct ggccgccaac acgttcagcg ggccgggcct gcgccgcgaa
     1441 cgcatggcga tactgaaagg gctggccgag gccattggcg agacctgcaa catctcgatg
     1501 cccgatggcg acgccatggt ctatgtggac cgggtcgaga cccactggcc gctgcgcatc
     1561 cgcctgccca tcggcacccg tgtgccgctg cattgcacat cggcgggcaa gacctacctg
     1621 tccaccctgc ccccggcgca gttcacgcgg ttgctgggcc ggctgaccct ggccgcccgg
     1681 acgccccact ccatcaccac gcccctcgcc ctggcggacg agatcgcgct gacgcgcgag
     1741 cgcggccatg gcgaggacga tcaggagatg gtcgaaggca tgatcgccct ggcggtgccg
     1801 atccgcgacc atctggaccg ggttttcggc acgctgtcct ttcacgcacc ggtccagcgc
     1861 ctgacgctgg acgccgcgcg ccaacatctg ccgctgctga aacagacggc acgcgatctg
     1921 gccgacacgc tgtaacccct ttcggcgccg aacccgtgcc cgcgccctcg tcccgctggc
     1981 gaaccgtgcg gggccggtcc cccgccgttc agcccttgcg acgaccggaa gcggcctgcc
     2041 cggaccgggg cggcttcgac gcgaacggcc gcgacctggc cttggcgccc gtcttcgtct
     2101 tgcccttggc agtctccgac ccggcttcgc gggcggactg agccgaggcc tccttccttg
     2161 ccctcgcggc cttgtcggcc gcgctccagc gcggtttcgc ccgggacttg gcgggcgcgt
     2221 cggcctcggc gcgcttgact gccggcgcgg gtttcgccgc ggcacgaacc ggggctgcgg
     2281 gccttgatcc gggcgtgc
//
LOCUS       DTVW01000994            2437 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2218210, whole
            genome shotgun sequence.
ACCESSION   DTVW01000994 DTVW01000000
VERSION     DTVW01000994.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2437)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2437)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2437
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2218210"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..288)
                     /locus_tag="EYO87_13030"
     CDS             complement(<1..288)
                     /locus_tag="EYO87_13030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016744962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66894.1"
                     /translation="MFRTLLGPFARFFEFHAKTHYRAERHSMALAGGILLAASIGGFI
                     EIAPLFTIDDTVEAAPDMRLYTPLEQAGRDIYIREGCYACHSQMIRTLQDDV"
     gene            complement(293..1945)
                     /gene="ccoN"
                     /locus_tag="EYO87_13035"
     CDS             complement(293..1945)
                     /gene="ccoN"
                     /locus_tag="EYO87_13035"
                     /EC_number="1.9.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009340012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit I"
                     /protein_id="HIC66895.1"
                     /translation="MIKRLTIAERQTAMLLSVLIALAGFAMAVIGRGDPMGVHGWIVL
                     ILAGALFFALASALYEPEPTEDRAVSYYDDPTKVGILLTLVWAVAGMGMGVWVAAQLA
                     WPDLRFDAAWSSFGRIRPIHTSGVIFGFGGNALIATSFHIMQRTSRARMAGHISPWFV
                     LLGFNLFCIIAATGYLMGVTQSKEYAEPEWYADIWLVIVWIVYFVLYIRTLARRNEPH
                     IYVANWYYLAFILVVAVLHIVNNLAVPASFGAAKSYSAFSGVQDAMTQWWYGHNAVAF
                     FLTAGFLGMLYYFLPKRAERPIYSYRLSILSFWGITFFYIWAGSHHLHYTAVPEWVQT
                     LGMTFSVMLLVPSWASAGNALMTLNGAWHKVRDDATLRFMMVAAVFYGLSTFEGSFMA
                     IRPVNSLSHYTDWTVGHVHAGAMGWVALITFGSIYALVPVLWRKQTMYSWKLVEWHFW
                     LALGGTVVYVFAMWNSGITQGLMWRTYTESGTLAYSFTDTLVKMHPYYIARAIGGAMF
                     FVGAVIGAFNVVMTIRSVGHQAQQLDYPTGSEANEPAVPAAE"
     gene            complement(1942..2118)
                     /gene="ccoS"
                     /locus_tag="EYO87_13040"
     CDS             complement(1942..2118)
                     /gene="ccoS"
                     /locus_tag="EYO87_13040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009451645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome oxidase assembly protein
                     CcoS"
                     /protein_id="HIC66896.1"
                     /translation="MTILYLLIPITLVMGAIGLGAFFWSLRSSQYDDLAGDAERILHD
                     DGDTPLVPNKETPR"
     gene            complement(2115..>2437)
                     /locus_tag="EYO87_13045"
     CDS             complement(2115..>2437)
                     /locus_tag="EYO87_13045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009209593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="nitrogen fixation protein FixI"
                     /protein_id="HIC66897.1"
                     /translation="SMAPATASDAGRAAADLVFLRDDLRAVPQAVGLARRTGRIVRQN
                     FGLAILYNSIAVPLAVAGLVTPLIAAIAMSASSVAVVANSLRLNRRRAPIAAPGAVLC
                     EVPA"
BASE COUNT          512 a          762 c          783 g          380 t
ORIGIN      
        1 cacgtcatcc tgaagcgtgc ggatcatctg gctgtggcag gcatagcagc cttcgcggat
       61 atagatgtcg cgcccggcct gttcgagcgg cgtataaagc cgcatgtcgg gcgcggcctc
      121 gaccgtgtcg tcgatggtga acagcggcgc gatctcgatg aagccgccga tgcttgcggc
      181 cagcaggatg cccccggcaa gggccatgga atgccgctcg gcccggtaat gggtcttggc
      241 gtgaaattcg aagaaccggg caaacggtcc gagaagtgtt ctgaacatgg gtctactccg
      301 ccgccggaac ggcaggctcg ttggcctccg acccggtggg atagtcaagt tgctgtgcct
      361 gatggccgac gctgcggatc gtcatcacga cgttgaacgc cccgatcacg gcacccacaa
      421 agaacatcgc cccgcctatg gcgcgcgcga tgtaataggg gtgcatcttc accagcgtgt
      481 cggtgaagga ataggccagc gtgccgcttt cggtataggt gcgccacatc agcccctggg
      541 tgatgccgct gttccacatc gcgaagacgt agacgacggt cccgcccagg gcgagccaga
      601 agtgccattc caccagcttc caggaataca tcgtctgctt gcgccacagc accggaacaa
      661 gcgcatagat cgacccgaag gtgatcagcg cgacccagcc catcgccccc gcatgcacat
      721 gtcccacggt ccagtcggta taatgcgaca gcgaattgac cgggcggatc gccatgaacg
      781 atccctcgaa tgtggacagg ccatagaata ccgccgccac catcatgaac cgcagcgtgg
      841 cgtcgtcccg gaccttgtgc caggccccgt tcagcgtcat cagcgcgttg ccggcactgg
      901 cccaggacgg caccagcagc atgaccgaaa aggtcatgcc cagcgtctgc acccattccg
      961 gaacggcggt atagtgcagg tggtgcgatc ccgcccagat atagaagaag gtgatccccc
     1021 agaaggacag gatcgacagg cgataggaat agatcggccg ctcggcccgc ttgggcagga
     1081 aatagtagag cattccaagg aagcctgccg tcaggaagaa ggccaccgcg ttatggccat
     1141 accaccattg cgtcatggca tcctgcacgc ctgaaaaggc cgaatagctt ttggctgcgc
     1201 cgaaggatgc cgggacggcc aggttgttga cgatgtgcag caccgccacg accaggatga
     1261 aggccaggta ataccagttg gcaacataga tatggggctc gttccggcgg gccagcgtgc
     1321 ggatatagag cacgaaatac acgatccaga cgatcaccag ccagatgtcg gcataccatt
     1381 ccggctctgc gtattccttg gactgggtga cgcccatcag atagccggtg gccgcgatga
     1441 tgcagaacag attgaagccc agcagcacga accagggcga gatgtggcct gccatgcgcg
     1501 cgcggctagt gcgttgcatg atgtggaacg aggtggcgat cagggcattg ccgccgaagc
     1561 cgaagatcac gccggacgta tggatcggcc ggatgcgccc gaagctggac caggccgcgt
     1621 caaagcgcag gtcgggccag gccagttgcg ccgcgaccca gacccccatg cccatgcccg
     1681 cgaccgccca gaccagcgtc agcaggattc cgaccttggt gggatcatca taataggaga
     1741 ccgcgcgatc ctcggtcggc tcgggttcgt agagcgcgct ggccagagcg aagaacagcg
     1801 ccccggcaag gatcagcacg atccagccat gcacccccat cggatcgccc cgcccgatga
     1861 cggccatggc aaagcctgcc agggcgatca ggaccgaaag cagcatcgcg gtctgccgtt
     1921 cggctatggt cagacgcttt atcatcgtgg ggtctccttg ttcgggacaa gcggggtgtc
     1981 gccgtcgtca tgcaggatgc gttcggcatc gcccgccaga tcgtcgtatt ggctgctgcg
     2041 aaggctccag aagaaggcgc caaggccgat ggcacccatg accagcgtga tcgggatcag
     2101 cagatagagg atcgtcatgc cggcacctcg caaagcaccg caccgggtgc cgcaatcggc
     2161 gccctgcgcc ggttcaggcg cagcgaattg gccaccaccg cgaccgagga ggccgacatg
     2221 gcgatggcgg cgatcagcgg cgtgacaagg cccgcgaccg ccagcgggac cgcgatgctg
     2281 ttatagagga tcgccaggcc gaaattctgc cggacgatgc ggccggtgcg gcgggcaagg
     2341 ccgacggcct gcggcaccgc gcgcagatcg tcgcgaagga acaccagatc ggcggcggcc
     2401 cggcccgcat ccgatgccgt tgccggcgcc atcgaca
//
LOCUS       DTVW01000995            3872 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2219208, whole
            genome shotgun sequence.
ACCESSION   DTVW01000995 DTVW01000000
VERSION     DTVW01000995.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3872)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3872)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3872
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2219208"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(87..914)
                     /gene="cysE"
                     /locus_tag="EYO87_13050"
     CDS             complement(87..914)
                     /gene="cysE"
                     /locus_tag="EYO87_13050"
                     /EC_number="2.3.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009564472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine O-acetyltransferase"
                     /protein_id="HIC66898.1"
                     /translation="MNVQNKSSNTLVMDRDAVWAQLRDEASAAIRNEPLLGALIHAGL
                     LHHSSLEAALAYRLSLKLASGEMSEQILRELADEAYHAGAELGDAARADLLAVYDRDP
                     ATHRLLQPVLFFKGFQALQAYRLAHWLWRRDRRDMAYFVQMRCSEYFGVDIHPAARIG
                     TGVMIDHAHSIVIGETATVGNDVSMLHSVTLGGTGKEDGDRHPKIGDGVMIGAGAKVL
                     GNIKVGHHSRIAAGSVVLHDVPSCKTVAGVPARVVGDAGCSEPSHSMNQLLGIDDYF"
     gene            complement(995..1708)
                     /locus_tag="EYO87_13055"
     CDS             complement(995..1708)
                     /locus_tag="EYO87_13055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011749160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2793 domain-containing protein"
                     /protein_id="HIC66899.1"
                     /translation="MVTSETMRLAMPLLQPSQAQKHVTVNEALMRLDGLVNLVLQSVS
                     TLLPPATVIDGQCWGVPLAAQGAWAGKDGLIALGSNGGWMFVAPSAGMRAFVADRGCE
                     AIHDGRGWALGALSLGVFGSGLVAGFAEAEVMVGTGADFDTGLAIPANVSVIGAVARV
                     TETLTGGLTSWRLGHGGATNRFGQGLGTSAGSWARGLLGTPTAYYSPETMVMTAEGGN
                     FSGGAVRLSVHWLELRLPF"
     gene            complement(1695..>3872)
                     /locus_tag="EYO87_13060"
     CDS             complement(1695..>3872)
                     /locus_tag="EYO87_13060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011749161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="host specificity protein"
                     /protein_id="HIC66900.1"
                     /translation="VCGGEGYDWYYASEADRDAQIRTPITDGQYDEAWVWRYKDLRSW
                     WQNLHFDRPDGVRSRQATNWVPGSKPIWFTEYGCAALDKATNQPNKFLDAMSSESTLP
                     YYSDGRRDDAIQAAYLAAVRSYWSKPGNNPERQDGGIMLDLDRAHVWCWDARPYPAFP
                     GRDDLWSDGPAWERGHWLNGRAGAVALEAVVGDICREAGVEAFDTSGLFGVVRGFSVL
                     GGETGRAALQPLMLAHGFDALERDGMLGFRRRDGLARAALGPEDLAVAEDVADFETTR
                     AAAPQVAGRLRLTHVEAGTDYATATAETSLPDGDAETVTDSEFTMAMTRGEGRAIAER
                     WLAEAEIGRDTARFALAPSKADLGPGDVILMRSNVAEMRRWRIDRVERAGAITFDAVR
                     VEPSVYRPALSSEDDHAIRRYVPPIPVFPVFLDLPLLRGDETPHAPYLAASARPWPGT
                     VAAYMSVEEEGGFDLNLTLPRKAVIGRTLGTLQRARPGVIDRGAPLRLRLKADTLRSV
                     TEKALLSGANVLAIGDGSTDRWEVLQFRKAVPVGNGVWEISERLRGQAGTDAIMPAIW
                     PEGSLVVIMDGAPRQVALPPSARGQERFWRIGPALRAPDDASYRLLTTEVKGVGLRPY
                     APCHMRAEDRQLSWVRRTRVDGDSWDGTDVPLGESLESYRLRITKDDIVIHQIDLDRP
                     EYLIPEAVFSEAAQNGGFTVAVAQLSDLFGAGPYLRRTFDGDQ"
BASE COUNT          765 a         1361 c         1082 g          664 t
ORIGIN      
        1 atcactgttt ttgccttaga atacctctaa aaaattcgcc tgcggcgcga gaagatgaca
       61 ctgccggaac tgaccggcag cggcatctag aaataatcgt caattcccaa aagctggttc
      121 atgctgtgcg acggttcaga acaacccgca tcgcccacca cgcgtgcggg aacgcccgcc
      181 acggttttgc acgatgggac atcgtgcagc acgaccgatc ccgccgcgat ccgcgaatga
      241 tgcccgacct tgatgttgcc cagcaccttc gcacccgctc cgatcatcac gccatcgccg
      301 atcttgggat gccggtcacc gtcctccttg ccggtcccac ccaaggtgac tgaatgcagc
      361 atggaaacgt cgtttccgac ggtcgccgtc tcgccgatga ctatggaatg ggcatggtcg
      421 atcatcaccc cggtgccgat cctggctgct gggtgaatat cgacaccaaa atattccgag
      481 caacgcatct gcacgaaata ggccatgtcg cgccgatcgc gccgccacag ccaatgcgcc
      541 agacgatagg cctgcaaggc ctgaaaaccc ttgaagaaca gcaccggctg caaaaggcgg
      601 tgcgtcgcag gatcccgatc gtagacagcc agcagatcgg cgcgcgcggc gtcgcccagt
      661 tcggctcccg cgtgataggc ctcgtccgcc agttcgcgca ggatctgttc gctcatttca
      721 cccgaggcca gcttgagcga tagccggtag gccagcgctg cctccagact ggaatggtgc
      781 aacaatccgg catggatcag ggcacccaag agcggctcgt tgcgaatggc cgccgaggct
      841 tcgtcgcgaa gctgcgccca gacggcgtcg cgatccatga ccagggtgtt gctggatttg
      901 ttttgcacat tcatcggctc ggtccgcgct tgctgttcct caccttctta gcccagatgg
      961 aaacgcggga aaagcgcgcg ggacctccat cacgtcaaaa cggcagccgc agttccagcc
     1021 agtgaaccga cagcctgacc gcacccccgc tgaaattacc gccctcggcc gtcatcacca
     1081 tcgtctcggg gctgtaatat gccgtgggcg tgcccagcag accgcgtgcc catgacccgg
     1141 ccgatgtgcc aagcccctgc ccaaagcgat tcgtcgcgcc gccatggccc agacgccagg
     1201 aagtcaggcc acctgtcagg gtctccgtga cccgcgcgac cgctccgatg accgatacat
     1261 tcgcggggat cgcaaggccg gtgtcgaaat ccgcgcccgt accgaccatc acctcggcct
     1321 cggcgaagcc ggcgaccagc ccggacccga aaactcccag cgacagggct ccaagggccc
     1381 aaccccgacc atcatggatc gcctcgcagc cccgatccgc gacgaaagcc cgcatccctg
     1441 ccgacggcgc gacgaacatc cacccgccgt tcgagccaag cgcgatcaat ccatccttgc
     1501 cggcccaagc gccctgcgcc gcgagaggca caccccagca ctgcccgtcg atcacggtag
     1561 ccggaggcaa caaggtgctg acactttgca aaaccaggtt caccagaccg tcgagtcgca
     1621 tcagtgcctc gttgacggtc acatgcttct gcgcctggga gggttgcagc aagggcatcg
     1681 ccagtcgcat cgtttcactg gtcaccatcg aaagttctcc tgagataggg gccggcacca
     1741 aaaaggtccg acaattgcgc tacggcgacc gtgaaaccgc cgttctgcgc ggcttcggaa
     1801 aagaccgctt cggggatcag gtattcgggc cggtcgagat cgatctggtg gatcacgata
     1861 tcgtccttcg tgatgcgcag acgatacgat tcgaggcttt cgcccaacgg gacatccgtt
     1921 ccgtcccagc tatcgccatc gacccgcgtg cgccgcaccc atgacagttg gcgatcctcg
     1981 gctcgcatgt ggcaaggtgc atagggccgc agtccgacac ccttgacctc cgtggtcaga
     2041 agccggtagc tggcatcatc gggtgcccgc aatgctggac cgatacgcca aaacctctct
     2101 tgtccgcgcg ccgagggcgg aagcgcgacc tgacgcggcg ccccatccat gatcacgaca
     2161 agactgccct cgggccagat tgccggcatg atcgcatctg ttccggcttg gccgcgcaac
     2221 cgttcgctga tttcccagac cccattgcca acgggcacgg ccttgcgaaa ttgcaagacc
     2281 tcccacctgt cggtcgagcc atcgccgatc gcaagaacgt tggctcccga cagaagggct
     2341 ttctcggtca cggaacgcag cgtgtccgcc ttcaatcgca agcgtagcgg cgcgccccgg
     2401 tcgatcacac cgggccgggc tcgttgcaat gtaccaagcg tccgcccgat gaccgccttg
     2461 cgcggcaagg tcaggttcag gtcgaacccg ccctcctctt cgaccgacat gtaggccgca
     2521 accgtgcctg gccaaggtcg cgcggacgca gccagatacg gtgcatgggg cgtctcgtca
     2581 ccacgcaaga gcggcagatc caagaaaacc ggaaagaccg gaatcggcgg cacatagcgc
     2641 cgtatggcat ggtcatcttc gctggaaagg gcaggccgat atacgctggg ctcgaccctc
     2701 acggcatcaa aggtaatcgc ccctgccctc tcgacccggt caatccgcca acgccgcatc
     2761 tctgccacat tcgatctcat caggatcaca tcaccgggcc ccagatccgc cttcgacggc
     2821 gccagcgcga agcgcgccgt atctcgcccg atttccgcct cggccagcca tcgctcggca
     2881 atggcgcgac cctcgccgcg ggtcatcgcc atggtgaatt cgctgtcggt cacggtttcg
     2941 gcgtcgccgt cgggcagact cgtctcggca gtcgcagtgg cgtagtcggt tccggcctcg
     3001 acatgcgtca ggcgaagccg cccggcaacc tgaggtgccg ctgcccgcgt cgtctcgaaa
     3061 tccgcgacat cctccgccac tgccaggtcc tctggcccga gcgcggcccg ggccagcccg
     3121 tctcgacgtc gaaagcccag cataccgtca cgctccagcg cgtcaaagcc gtgcgcaagc
     3181 atcagcggct gcaatgcggc ccggccggtt tcgccgccca agaccgaaaa gccgcgcacc
     3241 acaccaaaca gcccgcttgt atcgaaggct tccacgccag cctcgcggca aatgtcgccc
     3301 acaacggctt ccagcgccac cgctcccgcg cggccgttca gccagtgtcc acgttcccag
     3361 gccggcccgt ccgaccaaag atcgtcccgg cccggaaagg ctggataggg ccgggcgtcc
     3421 cagcaccaga catgcgcccg atccagatcc agcattatgc ccccatcctg ccgttcagga
     3481 ttgttgccag gctttgacca ataagacctt accgccgcca gataagccgc ctggatcgca
     3541 tcatcgcgcc gcccgtcgga ataataaggc aacgtgctct cagaactcat cgcatcaaga
     3601 aacttgttcg gctggttcgt cgctttgtcc aatgcagcgc agccgtattc ggtgaaccag
     3661 atcggcttcg atcccggaac ccagttcgtc gcctgccttg aacgcacacc gtccggccga
     3721 tcgaaatgca aattctgcca ccagctacgc agatccttgt agcgccagac ccaggcttcg
     3781 tcatattgtc cgtcggtaat cggcgtgcgg atttgtgcat cgcgatcggc ctcactggcg
     3841 taataccagt catatccctc gccgccgcaa ac
//
LOCUS       DTVW01000996            2968 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2221825, whole
            genome shotgun sequence.
ACCESSION   DTVW01000996 DTVW01000000
VERSION     DTVW01000996.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2968)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2968)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2968
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2221825"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..207
                     /locus_tag="EYO87_13065"
     CDS             <1..207
                     /locus_tag="EYO87_13065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009810899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfopyruvate decarboxylase subunit beta"
                     /protein_id="HIC66901.1"
                     /translation="LAAVARACGCENVVECKAEDTRAALETALSGDKMTIIVSKCDSG
                     NIPVPVITMDPVTIRDRFMGAVKA"
     gene            207..1388
                     /locus_tag="EYO87_13070"
     CDS             207..1388
                     /locus_tag="EYO87_13070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008279644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-hydroxy-acid oxidizing protein"
                     /protein_id="HIC66902.1"
                     /translation="MAAIHSYADARRLARRHLPWMVFDYIDGAAGAGSGEAANLAALR
                     DIRLQPRVLVDVSRRDLGVSVLGQDFRLPFGISPMGMCNLARPGADLMLARLAARLRI
                     PLGVSTVASTAMERLIEEAEGLAWFQLYFSGDGRGTMKLVDRANEAGYRVLILTLDVP
                     EVGLRPRELRRGFTMPFRIGPAQFLDFALHPAWSLSTLAHGRPEMANFQKPGFTFDRT
                     ESRARADWDYFRQLRDRWPGKLVVKGVTSVPDALRLRDAGADAIQVSTHGGRQLDCAP
                     PPILALRAIRDAVGADFPLFYDTGLRSGEDVARAFAMGANFAFFGRAMQFAIAAGGEA
                     GLSALVDLVTRELGLTLAQLGQTDMAALPATLHRAATAEARHGLGDPAHAPLSQPGPV
                     S"
     gene            complement(1525..2292)
                     /locus_tag="EYO87_13075"
     CDS             complement(1525..2292)
                     /locus_tag="EYO87_13075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_435516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HIC66903.1"
                     /translation="MSISLFDLNGKCALITGSSQGIGRALASGLAAAGAEIVLNGRDE
                     TRLSQVAKDLRGTGVTVHELAFDVTDHAAARRAVDSFEKATGAIDILINNAGMQHRRP
                     LEDFPPDAFEKLLQTNIASVFNVGQACARHMIGRRAGKIVNICSVQTALARPGIAPYT
                     ATKGAVASLTRGMATDWGKYGLQINGLAPGYFATPLNQALVDDPDFTAWLENRTPAGR
                     WGKVEELVGAAIFLSSQASSFVNGTTVYVDGGITACL"
     gene            complement(2433..>2968)
                     /locus_tag="EYO87_13080"
     CDS             complement(2433..>2968)
                     /locus_tag="EYO87_13080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010150472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF4976 domain-containing protein"
                     /protein_id="HIC66904.1"
                     /translation="FFLGEHGWFDKRFMYEESFQMPFLIRYPAAIPAGRICDDIICNV
                     DFAPTFLDFAGQVIPNYMQGRSARQVLEGNTPADWPQIAYHRYWMHRDPDHNAYSHYG
                     VRDQRYKLIYWYNEGYELPGTNHGGEDREWELFDCENDPLELFNVIGDPAYADIRLTL
                     LAQLDAKMAEIGDDPEH"
BASE COUNT          499 a          964 c          948 g          557 t
ORIGIN      
        1 ctggcggcag tggcgcgggc ctgcggctgc gagaacgtcg tcgaatgcaa ggccgaggat
       61 acccgcgccg cgctggaaac cgcgctgtcg ggcgacaaga tgacgatcat cgtcagcaaa
      121 tgcgacagcg gcaacattcc ggtgccggtc atcaccatgg atccggtgac gatccgcgac
      181 cgtttcatgg gcgcggtgaa agcctgatgg cagcgatcca ttcctacgcg gatgcccgcc
      241 ggctggcccg gcggcacctg ccctggatgg tgttcgacta tatcgacggc gcggccggcg
      301 cgggcagcgg cgaggccgcc aacctcgccg ccctgcgcga cattcgcctg caaccgcgcg
      361 tcctggtcga tgtcagcagg cgcgatctgg gtgtgtccgt gctgggccag gatttccgcc
      421 tgcccttcgg catcagcccg atgggcatgt gcaatctggc ccggcccggc gccgacctga
      481 tgctggcccg cctggccgcg cggctccgga ttccgcttgg cgtctcgacc gtcgcctcga
      541 ccgcgatgga gcggctgatc gaggaagccg agggccttgc ctggttccag ctctacttca
      601 gcggcgatgg ccgtggcacg atgaagctgg tcgaccgcgc gaacgaggcg ggctatcgcg
      661 tcctgatcct gaccctcgac gtgcccgagg tcgggctgcg accgcgcgaa ttgcggcgcg
      721 gcttcaccat gcccttccgc atcggtcccg cgcaattcct ggactttgcc ctgcacccgg
      781 cctggtcgct gtccactttg gcccatggcc ggcccgagat ggccaatttc cagaagcccg
      841 gttttacctt cgaccggacc gaaagccggg cccgggccga ttgggattac ttcaggcagc
      901 tcagggaccg ctggccgggc aagctggtgg tcaagggcgt cacctcggtc cccgatgcgc
      961 tgcggctgcg cgacgcgggc gcggatgcga tccaggtttc gacccatggc gggcggcaac
     1021 tggattgcgc gccgccgccg atcctggccc tgcgcgccat ccgcgatgcg gtgggggccg
     1081 actttccgct gttttatgac accggcctgc gatccggcga ggatgtggcc cgcgccttcg
     1141 cgatgggggc gaatttcgcc ttcttcggcc gcgccatgca attcgccatc gccgccgggg
     1201 gcgaggccgg cctgtcggcc cttgtcgatc tggtcacccg cgaactgggc ctgacgctgg
     1261 cacaactggg ccagaccgac atggcggccc tgcccgcgac cctgcaccgg gcggcgacgg
     1321 ccgaagcgcg gcacggcctc ggcgatccgg cccatgcgcc gctttcacaa cccggcccgg
     1381 tctcctagtc agacgacagg ggcccggccg cctaggcctt caaggacgcg gatcgacgga
     1441 tggtcggcat tctctttcca gacgaagccc tcatgcaggg cggatgattt ccatgctcgg
     1501 gaaacagatt tcatatacca tggctcacaa gcacgcggtt atgccgccgt cgacgtatac
     1561 cgtcgtgccg ttgacaaagg aggaggcttg cgacgacagg aagatcgccg cgcccacaag
     1621 ttcctcgacc ttgccccagc ggccggccgg agtccgattt tccagccaag cggtgaaatc
     1681 cggatcgtcc acaagcgcct ggttcagtgg cgtcgcgaaa taacccggtg cgaggccgtt
     1741 gatctgcagg ccgtatttgc cccagtccgt cgccatgccc ctggtcaagc tggccacggc
     1801 gcctttggtg gcggtgtagg gcgcgattcc aggtcgcgca agcgcggtct gcaccgagca
     1861 gatattgacg atcttgcccg cgcggcgccc gatcatgtgg cgcgcgcagg cctgtcccac
     1921 attgaagacg ctggcgatat tggtctggag aagcttttcg aaagcatcgg gggggaaatc
     1981 ttccagcggc cggcgatgct gcatcccggc attgttgatg agaatatcga tggcgccggt
     2041 ggccttttcg aaactgtcga cggcgcgtcg ggcggcggcg tgatctgtca cgtcgaaggc
     2101 cagttcgtga acggtcaccc cggtgccacg cagatctttc gcaacttggg acagcctggt
     2161 ctcatcacgg ccgttgagga cgatctcggc ccctgccgca gcgaggcccg aagccagggc
     2221 ccgaccgata ccctgcgacg agccggtaat caacgcgcat tttccgttca gatcaaacag
     2281 cgaaatactc atcttttctc ccgatgcgtg gccgtttcat tcgtcatcgc tgacgctaat
     2341 tgtttcgccg cggtgcgctc cgtcaccaga ggtgcaggca gccgccgcgt tctgtgcgcg
     2401 atcgatggcg cgaggtcatt ccgtccgcgg cgctaatgtt ccggatcgtc gccgatctcg
     2461 gccatttttg catccagctg cgccagcagc gtcagacgaa tatcggcata tgccggatcg
     2521 ccgatcacgt tgaacagctc cagcgggtcg ttttcgcagt cgaacaattc ccattctcgg
     2581 tcttcgccgc cgtggttcgt gccgggcagc tcatagccct cgttatacca atatatcagc
     2641 ttgtagcgct gatcgcgcac accataatgc gaataggcat tgtgatcggg gtcacgatgc
     2701 atccagtagc ggtgataggc aatttgcggc caatcggcgg gcgtgttgcc ctcaagcacc
     2761 tgacgtgccg aacgtccctg catgtagttc ggaatcacct ggcctgcaaa atcaaggaat
     2821 gtcggggcga aatcgacgtt gcagatgata tcgtcgcaaa tgcgcccggc cgggatcgcc
     2881 gccggatagc ggatcaggaa aggcatctga aatgattcct cgtacatgaa gcgcttgtcg
     2941 aaccagccgt gttcgccaag aaagaacc
//
LOCUS       DTVW01000997            1224 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2221955, whole
            genome shotgun sequence.
ACCESSION   DTVW01000997 DTVW01000000
VERSION     DTVW01000997.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1224)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1224)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1224
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2221955"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..518)
                     /locus_tag="EYO87_13085"
     CDS             complement(<1..518)
                     /locus_tag="EYO87_13085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009506016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ectoine hydrolase DoeA"
                     /protein_id="HIC66905.1"
                     /translation="MPELQRTPYRFSTEEYEQRLRKTRSSMEKLGLDLLIVSDPSNMA
                     WLTGYDGWSFYVHQCVIVGPDGPPIWFGRGQDAQGALRTVWMPDDYIIGYPDYYVQSV
                     ERHPMDYLWASLATRNWHRGFIGVEMDNYWYSAKAHERLVHGLPEAQILDATGLVNWQ
                     RAIKTPKELEYMR"
     gene            complement(511..>1224)
                     /locus_tag="EYO87_13090"
     CDS             complement(511..>1224)
                     /locus_tag="EYO87_13090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007800914.1"
                     /note="cyclodeaminase; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine cyclodeaminase family protein"
                     /protein_id="HIC66906.1"
                     /translation="GLMVVLSTETGRVCAVLLDNGYLTDVRTAAAGGVAARHLARPDA
                     SRAAIFGAGLQARMQLQALCLVRPIREAVIWARDPARAEALARDLARDGLRVRAQPDA
                     ATAAGFGDVIVTTTPATQPILRAEWLRPGQHVTAMGSDQAGKNELDPLCLDRADLYVA
                     DRVGQTRLMGELRAALGAGVIAEDAAIPELGDIISGRHPGRTSPDQITIADLTGTGVQ
                     DTAIATHALAAFSKDQPNA"
BASE COUNT          203 a          412 c          405 g          204 t
ORIGIN      
        1 cgcatgtatt ccagttcctt gggcgtcttg atggcgcgct gccagttcac cagcccggtg
       61 gcgtcaagaa tctgcgcctc gggaagtccg tggaccagcc gttcatgcgc cttggcggaa
      121 taccagtaat tgtccatctc gacgccgatg aagccgcgat gccaattgcg ggtggcaagg
      181 ctggcccaca ggtagtccat cgggtggcgt tcgacggact gcacataata atccgggtag
      241 ccgatgatat agtcgtccgg catccagacc gtgcgcaatg cgccctgcgc atcctgcccg
      301 cgcccgaacc agatcggcgg cccgtcgggc ccgacgatca cgcattgatg cacatagaag
      361 gaccagccgt catagccggt cagccaggcc atgttggacg ggtccgacac gatcagcaga
      421 tcgaggccca gcttttccat gctggaacgt gtctttcgca gccgctgttc gtattcctcg
      481 gtcgaaaagc ggtagggggt cctttgcagt tcaggcattc ggctggtctt tcgaaaacgc
      541 ggcaagcgcg tgggtggcaa tggcggtgtc ctgcacgccg gtgcccgtca gatccgcgat
      601 ggtgatctgg tcgggtgagg ttcggccggg atggcggccg gaaatgatgt cgcccagttc
      661 ggggatcgcg gcatcctcgg cgatcacccc cgcgccaagc gcggcgcgca attcgcccat
      721 cagccgcgtc tggccgacgc gatcggcgac gtagagatcg gcgcgatcaa ggcacagcgg
      781 atccagttcg ttcttgccgg cctgatcgct gcccatcgcg gtcacatgct ggccggggcg
      841 cagccattcg gcccgcagga tcggctgtgt ggcgggcgtc gtggtcacga tcacatcgcc
      901 aaagcccgcc gcggtcgcgg cgtcgggctg ggcccggacc cgcaacccgt cgcgggccag
      961 gtcgcgggcc agcgcctcgg cccgggcggg atcgcgtgcc cagatcaccg cctcgcggat
     1021 cgggcggaca aggcaaagcg cctgcaactg catccgggcc tgcaaccccg cgccgaagat
     1081 cgcggcccgg ctggcatccg ggcgtgccag atgccgcgcc gccacgcccc cggccgccgc
     1141 cgtgcgaaca tcggtcagat agccgttatc cagcagcacc gcgcaaaccc ggccggtttc
     1201 ggtggacagc accaccatca gccc
//
LOCUS       DTVW01000998            1011 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2225613, whole
            genome shotgun sequence.
ACCESSION   DTVW01000998 DTVW01000000
VERSION     DTVW01000998.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1011)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1011)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1011
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2225613"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>1011
                     /locus_tag="EYO87_13095"
     CDS             <1..>1011
                     /locus_tag="EYO87_13095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_354113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA polymerase I"
                     /protein_id="HIC66907.1"
                     /translation="LDQVLAVLKPVLEDAAILKIGQNLKYDWKILARHGIRMDPIADT
                     MLMSYALNAGTHNHGMDELAERYLGHKCIPIKGLIGSGKAQINFSQVPIDKAAPYAAE
                     DADVTLRLFRHFAPMLPAQRVTTVYERLERPMVAVLGEMEMAGIRVDGDHLKRMSNAF
                     AQKMAQLEEEIHDLAGQSFNVGSPKQLGEILFDKMGLAGGKQGKTGAYSTSADVLEDL
                     AVEHDLPARILDWRQIAKLKSTYTDALQGHVNPETGRVHTSYSIAGAQTGRLASTDPN
                     LQNIPVRTEEGRRIREAFIAAPGHRLVSLDYSQIELRILAHVADIPALKQAFRDGIDI
                     HA"
BASE COUNT          202 a          316 c          320 g          173 t
ORIGIN      
        1 ccctggatca ggtgctggcg gtgctgaaac cggtgctgga ggatgctgcg atcctgaaga
       61 tcgggcagaa cctgaaatac gactggaaga ttctggcccg ccacggcatc cgcatggacc
      121 ccatcgccga cacgatgctg atgtcctatg cgctgaacgc gggcacccac aatcatggca
      181 tggacgagct ggccgagcgc tatcttggcc ataaatgcat cccgatcaag ggcttgatcg
      241 gttctggcaa ggcgcagatc aatttctcgc aggttccgat cgacaaggcc gcgccctatg
      301 cggccgagga tgccgatgtg accctgcgtc tgttccggca tttcgcgccg atgctgccgg
      361 cccagcgggt cacgaccgtc tacgaaaggc tggagcgccc catggtcgcc gttctgggcg
      421 aaatggagat ggccggcatc cgcgtcgatg gagaccatct gaagcggatg tcgaatgcct
      481 ttgctcagaa gatggcgcag cttgaggaag agatccacga tctcgcgggc cagagcttca
      541 atgtcggcag tcccaagcaa ttgggcgaga tcctgttcga caagatgggc ctggctggcg
      601 gcaagcaggg caagaccggg gcctattcca ccagcgccga cgtgctggag gatcttgcgg
      661 ttgagcatga cctgcccgcc cggatcctgg actggcgcca gatagccaag ctgaaatcga
      721 cctataccga cgcgctgcag ggccatgtga acccggaaac cgggcgggtc cataccagct
      781 attccatcgc cggggcgcag accgggcggc tggcctcgac cgaccccaat ctgcagaaca
      841 ttcccgtgcg caccgaggag ggccgccgca tccgcgaggc cttcatcgcc gcgccggggc
      901 atcggctggt cagcctggac tacagccaga tcgagttgcg aatcctggcc catgtcgccg
      961 acatcccggc gctgaaacag gctttccggg acggcatcga cattcacgcc a
//
LOCUS       DTVW01000999            1491 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2227483, whole
            genome shotgun sequence.
ACCESSION   DTVW01000999 DTVW01000000
VERSION     DTVW01000999.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1491)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1491)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1491
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2227483"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..474
                     /locus_tag="EYO87_13100"
     CDS             <1..474
                     /locus_tag="EYO87_13100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010392581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anhydro-N-acetylmuramic acid kinase"
                     /protein_id="HIC66908.1"
                     /translation="DEGGALAAAGRADSGAVADFLRHPFFDRKPPKSLDRDQFAGLAA
                     AVSGLADADAAATLVAALAGSVAAAFRWLPAAPALVLVCGGGRHNGAIMSALRDILPA
                     RVMPVEAAGLDGDMLEAQAFGWLAVRVMRGLPTSGPGTTGVPAPACGGRISHPRL"
     gene            574..>1491
                     /locus_tag="EYO87_13105"
     CDS             574..>1491
                     /locus_tag="EYO87_13105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66909.1"
                     /translation="MTRHLLGSVAALALLTGQALAQDQNAQTTGTAPAAESQNAAVSG
                     VTVQQCAPKVTVTQTPPQVTITMPADAGGEPMVSVTQAPPEVSVEACEPMVTFADGAG
                     QQAQMKPAEGEPEVVVNAPETAELTVTRQNTGTAGADSNATATAAADGAQGGNSATAA
                     GGGGNTAASDAGGAASDTAASPDAAGNAADENAAQPAGGADQASTSPADAGASGQSAD
                     GAAAGNGTAAADGVQDATASDSSVSQNPADSASAGDTTSGADEAAAPEGSAPPAPGGN
                     AADAGEQPSATVAPTTAAPDQAANDSAAAP"
BASE COUNT          247 a          512 c          554 g          178 t
ORIGIN      
        1 gacgagggcg gcgccctggc cgcggcaggc cgtgccgatt cgggggccgt ggcggatttc
       61 ctgcgccatc cctttttcga ccggaagccg ccgaaatcac tggatcgcga ccagttcgcg
      121 ggcctggccg cggccgtctc ggggctggcc gatgccgacg ccgccgcgac attggtcgcg
      181 gcgctggcgg gatcggtggc cgcggcgttc cgctggttgc cggccgcgcc cgcgctggtc
      241 ctggtctgcg gcggcggacg gcacaacggc gcgatcatgt ccgccttgcg cgatatcctg
      301 cccgcacggg tcatgccggt cgaggcggcc ggactggatg gcgacatgct tgaggcgcag
      361 gctttcggct ggctggcggt gcgggtgatg cggggattgc cgacctccgg ccccggcacg
      421 accggcgttc cggccccggc ctgcggcggt cggatcagtc atccccggct gtaggatcgt
      481 gcagcgtggt cacgggttcg ggaaccctgt cacgccctcg cggttgagcc tgcgaagccg
      541 cagcggcggc ccgaggaaaa tacggaggaa gacatgacca gacatctctt gggaagcgtt
      601 gctgcgctgg cgcttttgac aggccaggcc ctggcgcagg accagaacgc ccagaccacc
      661 gggactgccc ctgcggccga aagccagaat gcggcagtca gcggcgtcac cgtgcagcaa
      721 tgcgcgccca aggtgacggt tacgcagaca ccgccgcaag tcaccatcac catgcccgcc
      781 gacgcgggcg gcgagccgat ggtttccgtc acgcaggccc cgcccgaagt cagcgtcgag
      841 gcgtgcgagc cgatggtgac cttcgccgat ggcgctggcc agcaggcgca gatgaagccc
      901 gccgagggcg agcccgaggt ggtggtcaac gcacccgaaa cggccgagct gaccgtgacg
      961 cgccagaaca ccggaaccgc cggggcggac agcaatgcca cggcgacggc tgcggcggat
     1021 ggcgcacaag gcggcaattc ggcaaccgcc gcaggcggag gcggaaatac agcggcatcg
     1081 gacgccggcg gcgcggcatc tgatacggcc gcgtcacctg atgcggccgg aaacgcggcg
     1141 gatgaaaacg cggcacagcc ggcagggggt gccgaccagg cgtcaactag cccggcagat
     1201 gcaggtgctt caggacaatc ggccgacggc gcggctgccg gaaatggcac cgcagccgcg
     1261 gatggcgttc aggatgcaac cgcttccgac agctcggtgt cacagaatcc ggcggattcc
     1321 gccagcgcag gcgacacgac cagcggggcg gatgaagcgg ccgcgcccga aggaagcgcg
     1381 ccgccggcgc ccggcgggaa tgccgccgac gccggcgaac aaccgtccgc gacggtcgcg
     1441 ccgaccacgg ccgctccgga ccaggccgcg aacgacagcg cggcggcacc c
//
LOCUS       DTVW01001000            1085 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2228715, whole
            genome shotgun sequence.
ACCESSION   DTVW01001000 DTVW01000000
VERSION     DTVW01001000.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1085)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1085)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1085
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2228715"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            114..671
                     /gene="ruvA"
                     /locus_tag="EYO87_13110"
     CDS             114..671
                     /gene="ruvA"
                     /locus_tag="EYO87_13110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008241853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration protein RuvA"
                     /protein_id="HIC66910.1"
                     /translation="MIVGIEGTVERKDPTFVHLNVQGLIHEVHVSINTSNAIQESKVK
                     LFVTQVIREDASLLFGFNDTNEKKMFDTVLKINGVGPKVGLAICSTFTPSTFAKVVSS
                     KDVSMLKRVPGIGPKAASRILVELADFIVDGNADNETSGALGEAVMALESLGFKGDAI
                     RKALSGCSGDTSALVKQGLKKLQRL"
     gene            complement(681..>1085)
                     /locus_tag="EYO87_13115"
     CDS             complement(681..>1085)
                     /locus_tag="EYO87_13115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011981056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2461 family protein"
                     /protein_id="HIC66911.1"
                     /translation="QGATHRMQSASFYMHYDPFEVFVATGIRNFKPPLLATYREYIKN
                     DVKRKALHTILETLKTKGYSIPEPKYKRFPIGFDKEDKYAYLYLYGAMYAFKTFEPDN
                     TFYSEAIIDRNFKVYTEMLDLHQWVYELTLYH"
BASE COUNT          353 a          191 c          220 g          321 t
ORIGIN      
        1 caaaagcaca cagcatattc attgcaaatc aaaaatatgt caatatgaca tgtttttaga
       61 caatcactta aactcttgat atactgtgac aaatattata aatggagtgt gtgatgatag
      121 taggtataga aggaactgta gaaagaaaag accccacttt tgtgcatcta aatgtacaag
      181 gactcataca tgaagtacat gtgtccatta acacatctaa tgccatacaa gaaagtaaag
      241 taaagctctt tgtcactcaa gtcatacgtg aagatgcaag tctactcttt ggttttaacg
      301 atacaaatga aaaaaagatg ttcgataccg tactaaagat aaacggtgta ggtcctaaag
      361 taggacttgc catctgttcc acttttacac ctagtacctt tgctaaggta gtgtcatcta
      421 aagatgtaag catgctcaaa cgtgtaccag gcataggccc taaggctgcg agtcgtatac
      481 ttgtagaact tgccgacttc atagtagatg gcaacgcaga caacgaaacc tctggtgcat
      541 tgggcgaggc agtcatggca ctagagagtt tgggctttaa aggtgatgcc atacgcaaag
      601 cactttcagg gtgtagtgga gacacaagtg ctttggtgaa acaaggactt aaaaagttac
      661 aaaggcttta gaacttccca ttagtggtaa agtgtaagct catacaccca ctgatgtaaa
      721 tctaacatct ctgtatagac tttaaaattt ctgtctataa ttgcttcaga gtaaaaagta
      781 ttgtcaggct caaacgtttt aaatgcatac atagcaccgt agaggtaaag gtaagcatat
      841 ttatcttctt tgtcaaagcc tataggaaaa cgtttatatt tgggctctgg tatactgtac
      901 ccttttgttt ttaatgtttc aagtatggtg tgaagtgctt ttctttttac atcatttttg
      961 atgtactctc ggtaggtagc aagcaaaggg ggtttaaagt tacgtatacc tgtagccaca
     1021 aaaacctcaa aaggatcata atgcatgtaa aatgaggcac tttgcattct atgtgtagct
     1081 ccttg
//
LOCUS       DTVW01001001            1584 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2229477, whole
            genome shotgun sequence.
ACCESSION   DTVW01001001 DTVW01000000
VERSION     DTVW01001001.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1584)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1584)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1584
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2229477"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(315..635)
                     /gene="trxA"
                     /locus_tag="EYO87_13120"
     CDS             complement(315..635)
                     /gene="trxA"
                     /locus_tag="EYO87_13120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011909895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HIC66912.1"
                     /translation="MATVPVNDSEFDAEVRQADTPVIVDFWAEWCGPCKQIGPALEEL
                     SEEYAGKLKVVKVNVDENPEQAAALGVRGIPALFMFKDGEVVSNRMGAAPKAALKSWI
                     DESV"
     gene            complement(692..>1584)
                     /locus_tag="EYO87_13125"
     CDS             complement(692..>1584)
                     /locus_tag="EYO87_13125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011749069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="double-strand break repair helicase AddA"
                     /protein_id="HIC66913.1"
                     /translation="LYVAMTRAESWLIVAAAGETGAGLDSWHGMITDGAARAALPRSP
                     IEIEGVGQGTRLTFGAWPEWADAAEAQSAAATPRPAWLACVPEPVARPPRPVAATGLG
                     GAKVLAAATDDSDPAAAMLRGTRLHLLLEHLPGTAAGDWPGLARAVLAGAEGGLPDEA
                     RLADLLAEARAVIEAPDLADIIDPGPDAQVLREVALSAPLPGIGILHGTIDRLIVTAN
                     RILAVDYKSNATVPATPEAAPDGILRQMAAYRAALRQIWPGRRIEVAILWTATRSLME
                     IPDPLLDRALAALDPADPRS"
BASE COUNT          226 a          548 c          555 g          255 t
ORIGIN      
        1 tgcgcgattg cgccttcgtc gcgacgcaga acagcgccgt ggcgatggac ggctttatcc
       61 tgggcaagcc cgcggttctg ttcggccagt cggattttca tcatatcgcg ctgaacgtgg
      121 ccgaactggg atccagcgag gccctgtcgc gcgcgcctga acaccggccc gattatgcgg
      181 gctatctgga ctggttcctg cggcagagca gcctcgacat gatggcgagc gatgccgatg
      241 cccggctgct tgtcgccatg aaaaagggcg gctggcccgt atgaccgccg ccccgccttt
      301 ctgtccggcc cggatcagac cgattcgtcg atccagcttt tcagcgcggc tttcggcgcc
      361 gcacccatgc ggttggacac gacctcgcca tccttgaaca tgaacagcgc gggaatcccg
      421 cgcacgccaa gggccgcggc ctgttcgggg ttttcgtcca cgttgacctt cacgaccttc
      481 agcttgccgg catattcctc ggacagttct tccagagcgg ggccgatctg cttgcagggt
      541 ccgcaccatt ccgcccagaa atccacgatg acgggggtgt cggcctgacg cacttcggcg
      601 tcgaattcgc tgtcattgac gggcacggta gccatgatct tgctccttgg gaaatggcgg
      661 gggccgggga tcggcggcac tgtcctgaaa gctatgaacg cggatcggcc gggtcaaggg
      721 cggccagcgc gcggtccagc agcggatccg ggatttccat caggctgcgc gtggccgtcc
      781 acaggatcgc cacctcgatc cgccggccgg gccagatctg ccgcagggcc gcgcgatagg
      841 cggccatctg gcgcaagatg ccgtcggggg cggcctcggg cgtcgcgggc acggtggcgt
      901 tcgacttgta gtcgaccgcc aggatgcggt ttgcggtgac gatcagccgg tcgatggtgc
      961 cgtgcaggat gccgatgccg ggcaggggcg cgctcagcgc gacctcgcgc agcacctgcg
     1021 cgtccgggcc ggggtcgatg atgtccgcca gatccggggc ctcgatcacg gcgcgcgcct
     1081 cggccagcag gtcggccagc cgggcctcgt ccggcagccc gccctcggcc cccgccagaa
     1141 ccgcgcgggc gaggccgggc cagtcaccgg cagcggttcc gggcagatgt tccagcagca
     1201 gatgcaacct tgtgccgcgc agcattgccg ccgccggatc ggaatcgtcg gtcgccgcgg
     1261 ccagcacctt ggcgccgccc agacctgtcg ccgcgaccgg gcgcgggggc cgggcgaccg
     1321 gttcggggac gcaggccagc caggcgggcc gaggggtcgc ggcggcggac tgcgcctcgg
     1381 cggcatcggc ccattcgggc caggcgccga aggtcaggcg cgttccctgc ccgacaccct
     1441 cgatctcgat cggggaccgg ggcagggctg cgcgggccgc gccgtccgtg atcatgccgt
     1501 gccagctgtc cagccctgca ccggtctcgc cagctgccgc cacgatcagc cagctttccg
     1561 cccgcgtcat ggcgacgtaa agca
//
LOCUS       DTVW01001002            2379 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2229871, whole
            genome shotgun sequence.
ACCESSION   DTVW01001002 DTVW01000000
VERSION     DTVW01001002.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2379)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2379)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2379
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2229871"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..709
                     /gene="pcaH"
                     /locus_tag="EYO87_13130"
     CDS             <1..709
                     /gene="pcaH"
                     /locus_tag="EYO87_13130"
                     /EC_number="1.13.11.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008885168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="protocatechuate 3,4-dioxygenase subunit beta"
                     /protein_id="HIC66914.1"
                     /translation="YHQRDRSLHPPALTPKYKTSVARSPRWPMISLENTISEITGPRF
                     GHADIDPIDNDLIRNYAKTGDPVGERIIVHGRVLDENARPVPNPLVEIWQANAGGRYR
                     HKKDTYLAPIDPNFGGCGRTLSDENGQYAFRTIKPGAYPWRNRVNNWRPAHIHVSVFG
                     SGFLQRLITQLYFEGDPLIAHCPIVHAIPDRDAVQQLTAKLDLNATIPLDSIAYKFDI
                     VLRGRRSTLFENRLEGN"
     gene            709..1332
                     /gene="pcaG"
                     /locus_tag="EYO87_13135"
     CDS             709..1332
                     /gene="pcaG"
                     /locus_tag="EYO87_13135"
                     /EC_number="1.13.11.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008557320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protocatechuate 3,4-dioxygenase subunit alpha"
                     /protein_id="HIC66915.1"
                     /translation="MPQELHYLRESASQTAGPYVHIGLAPGAAGFDIYREELGRDIAG
                     PNAKGQRIRVEGLVIDGTGSPVKDVLLEVWQANANGHYAHPEGGGPVEDGFRGWGRVI
                     TDFDSGEWGFDTVKPGPVPGRNGSVQAPHLNLWIVARGINIGLNTRMYFPDEADANAA
                     DPVINLIEWEKRRATLIARQSEDRDGVPVYRFDIRLQGDDETVFFDI"
     gene            1342..2175
                     /locus_tag="EYO87_13140"
     CDS             1342..2175
                     /locus_tag="EYO87_13140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008885299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-keto-5-aminohexanoate cleavage protein"
                     /protein_id="HIC66916.1"
                     /translation="MSQPCIICVAITGSVPTKADNPAVPVTLSEQLESTQAAFEAGAS
                     IAHCHVRDDEGKPTSDPDRFAALKEGIETHCPGMIVQLSTGGRSGAGRARGGMLSLSP
                     EMASLSVGSNNFPTRVYDNPPDLVDWLAGEMIAHDVKPEIEAFDLSHIFQAAKMWKDG
                     RIRDTPYVQFVMGVKNAMPVDRAVFDFYRATVARLFGENAAWCAAGIGQNQIVLNEWA
                     ISTGGHARTGLEDNVRLDRKTLAPSNAALVQRAADLCSRYDRPVASPAQARQILGLRA
                     A"
     gene            2172..>2379
                     /locus_tag="EYO87_13145"
     CDS             2172..>2379
                     /locus_tag="EYO87_13145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="3-carboxy-cis,cis-muconate cycloisomerase"
                     /protein_id="HIC66917.1"
                     /translation="MTLTDGLFGDEELGRAMGARAQIAAMLKAEAALARAQGRLGIIP
                     ETASGSVSETAENLRPDPSELAAGM"
BASE COUNT          435 a          767 c          785 g          392 t
ORIGIN      
        1 ataccaccag cgcgaccgca gcctgcatcc gcctgcgctg accccgaaat acaagaccag
       61 cgtggcccgc agcccgcgct ggccgatgat ctcgctggaa aacaccatca gcgagatcac
      121 cggcccgcgg ttcggccatg ccgacatcga cccgatcgac aacgatctga tccgcaacta
      181 cgccaaaacc ggcgatcctg tgggcgaacg gatcatcgtc catggccgcg tgctggatga
      241 aaacgcgcgc ccggtcccca atcccctggt cgagatctgg caggccaatg cgggcgggcg
      301 ctatcgtcac aagaaggaca cctatcttgc cccgatcgac cccaatttcg gcggctgcgg
      361 gcgaacgctg agcgacgaga acggacaata cgcctttcgc acgatcaagc ccggcgccta
      421 tccgtggcgc aaccgggtca ataactggcg ccccgcccat atccatgtct cggtcttcgg
      481 atcgggcttt ctgcagcgac tcatcaccca gctttacttc gagggcgacc cgctgatcgc
      541 gcattgcccc atcgtccatg ccatccccga cagggacgcg gtccagcaat tgacggcgaa
      601 actggatctg aacgccacga tcccgctgga ttccatcgcc tataaattcg acattgtgct
      661 gcgcggccgc cgctcgaccc tgttcgagaa ccggctggag ggaaactgat gccacaggaa
      721 ttgcactatc tgcgcgaatc cgcatcccag accgcgggcc cctatgtcca tatcggtctg
      781 gcgcccggcg ctgcgggctt tgacatctat cgcgaggaac tgggccgcga catcgccggt
      841 ccgaatgcga agggacagcg gatccgggtc gaggggctgg tcatcgacgg cacgggaagc
      901 ccggtcaagg atgtcctgct ggaggtctgg caggccaatg cgaacgggca ttacgcccat
      961 cccgagggcg gcggcccggt cgaggacgga tttcgcggct gggggcgtgt gatcaccgac
     1021 ttcgacagcg gcgaatgggg cttcgacacg gtgaagccgg ggccggttcc ggggcggaac
     1081 ggatcggtgc aggcgccgca tctgaatttg tggatcgtcg cgcgcgggat caatatcggg
     1141 ttgaacacgc ggatgtattt ccctgacgag gccgacgcga atgccgccga tccggtcatc
     1201 aacttgatcg aatgggaaaa gcgccgcgcc accctgatcg cgcggcaatc cgaggatcgc
     1261 gacggcgttc cggtctatcg cttcgacatt cgtctgcagg gcgatgacga aaccgttttc
     1321 ttcgatatct gagggggtct catgtcccaa ccctgcatca tctgcgtggc gatcaccggc
     1381 tcggttccga ccaaggccga caatcccgcc gttccggtca ccctgtccga gcagctcgaa
     1441 agcacgcagg ccgcgttcga ggcgggcgcc agcatcgcgc attgccatgt ccgcgacgac
     1501 gagggcaaac ccaccagcga tcccgaccgg ttcgcggcgc tgaaagaggg gatcgagacg
     1561 cattgccccg gcatgatcgt gcagctttcc acgggcgggc ggtcgggtgc ggggcgggcg
     1621 cggggcggca tgctgtcgct gtcgcccgag atggcgtcgc tgtcggtcgg ctcgaacaac
     1681 tttccgacgc gggtctatga caatccgccc gatctggtcg attggctggc gggcgaaatg
     1741 attgcccacg acgtcaagcc cgagatcgag gccttcgatc tgtcccacat ctttcaggcc
     1801 gcgaagatgt ggaaggatgg ccgcatccgc gacacgccct atgtgcaatt cgtgatgggg
     1861 gtgaagaacg cgatgccggt cgatcgcgcg gtgttcgact tctaccgcgc caccgtcgcg
     1921 cggctgttcg gcgagaatgc ggcatggtgc gcggccggga tcggccagaa ccagatcgtg
     1981 ctgaacgaat gggcgatctc gacgggcggc catgcccgga cgggtcttga ggacaacgtg
     2041 cgactggacc gcaagacgct ggccccgtcg aacgcggcgc tggtgcagcg ggcggctgat
     2101 ctgtgcagcc ggtatgaccg ccccgtggcc agcccggcgc aggcgcggca gatcctggga
     2161 ttgcgggccg catgaccctg accgacggtc ttttcgggga tgaggaactg ggccgggcca
     2221 tgggcgcccg cgcccagatc gccgccatgc tgaaggccga ggccgcgctg gcgcgcgcgc
     2281 agggaaggct cgggatcatc cccgaaacgg cgtcggggtc ggtttccgaa acagccgaga
     2341 atctgcggcc ggacccgtcc gaactggcgg caggcatgg
//
LOCUS       DTVW01001003            1450 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2229957, whole
            genome shotgun sequence.
ACCESSION   DTVW01001003 DTVW01000000
VERSION     DTVW01001003.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1450)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1450)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1450
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2229957"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1450)
                     /locus_tag="EYO87_13150"
     CDS             complement(<1..>1450)
                     /locus_tag="EYO87_13150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009176821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="biotin/lipoyl-binding protein"
                     /protein_id="HIC66918.1"
                     /translation="VENMRVAMDAVIETGKICEGTVCYTGNMLDPDRSKYDLQYYVET
                     AKDLKSAGAHVLGLKDMAGLLKPAAATILIKALKQEVGLPVHFHTHDTSGMGGATILA
                     AAAAGVDAVDCAMDALSGNTSQPTIGSVVEALAGTDRDTGLDIGAIRSISNYWERVRE
                     NYAAFESGLQSPASEVYLHEMPGGQFTNLKSQARSMGLEDRWHEVAQAYADVNRMFGD
                     IVKVTPSSKVVGDMALMMVSQNLTPADVLDPERDMSFPDSVVDMMRGNLGQPPGGWPE
                     GIQKKVLKGEAPITDRPGAHLDPVDLEETRTKVQAEMEGKPVDDEDLCGYLMYPKVFL
                     DYMGRHRIYGPVRTLPTRSFFYGMEPGQEIAVEIDPGKILEIRLQALSDTDEKGEVKV
                     FFELNGQPRSIRVPNRKVAGSAAARPKADPADDTHVGAPMPGVVASVAVSQGQAVKQG
                     DLLLTIEAMKMETGIHADRDGSIKAVHVGAGQQ"
BASE COUNT          224 a          494 c          449 g          283 t
ORIGIN      
        1 ctgctgaccg gcgccgacat ggaccgcctt gatcgagccg tcgcggtcgg catggatgcc
       61 ggtttccatc ttcatcgcct cgatggtcag cagcaggtcg ccctgcttga ccgcctgacc
      121 ctgactgacc gcgaccgagg ccacgacgcc gggcatgggc gcgccgacat gggtgtcatc
      181 ggccggatcg gccttgggcc gcgcggcggc gctgccggcc accttgcggt tcggcacgcg
      241 gatggaccgc ggctggccat tcagttcgaa gaagaccttg acctcgccct tttcgtcggt
      301 gtcgctcagc gcttgcaggc ggatctccag gatcttgccc gggtcgatct cgaccgcgat
      361 ctcctgaccc ggctccatcc cgtagaagaa gctgcgcgtc ggcagcgtcc gcaccggccc
      421 gtagatgcgg tgacggccca tatagtcgag gaagaccttg ggatacatca gatagccgca
      481 cagatcctcg tcgtcgacgg gcttgccctc catctcggcc tggactttcg tccgcgtttc
      541 ttccagatcg acggggtcca gatgcgcgcc ggggcggtcg gtgatgggcg cttcgccctt
      601 cagcaccttc ttctggatcc cctcgggcca gccgccgggg ggttggccca gattgccgcg
      661 catcatgtcc accacggaat cggggaagga catgtcgcgt tccggatcca gcacgtcggc
      721 aggggtcagg ttctgtgaca ccatcatcag cgccatgtcg cctaccacct tggacgaggg
      781 cgtgaccttc acgatgtcgc cgaacatccg gttcacgtcg gcataagcct gggccacctc
      841 gtgccagcga tcctccagcc ccatcgaccg cgcctggctt ttcaggttgg tgaactggcc
      901 gcccggcatc tcgtgcagat agacctcgga tgcgggcgat tgcaggccgg attcaaaggc
      961 cgcgtaattc tcgcgcacac gctcccagta gttgctgatg gaccggatcg cgccgatgtc
     1021 caggccggta tcgcggtcgg tgcccgccag cgcctcgacg accgacccga tggtgggctg
     1081 gctggtattg cccgacaatg cgtccatcgc gcaatcaacc gcatcgacgc ccgccgcggc
     1141 ggcagccagg atcgtcgcgc cgcccatgcc gcttgtgtca tgggtgtgga aatggaccgg
     1201 caggccgacc tcttgcttca gcgccttgat caggatcgtc gcggcggcgg gtttcagcag
     1261 gcccgccatg tccttcagcc ccagcacgtg cgcgccggca gatttcagat ctttcgccgt
     1321 ttctacataa tattgcaggt catacttgga ccgatccggg tccagcatgt tgccggtata
     1381 gcagaccgtc ccctcgcaga tcttgccggt ctcgatcacc gcatccatgg cgacgcgcat
     1441 gttctcgacc
//
LOCUS       DTVW01001004            2094 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2233940, whole
            genome shotgun sequence.
ACCESSION   DTVW01001004 DTVW01000000
VERSION     DTVW01001004.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2094)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2094)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2094
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2233940"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..753
                     /locus_tag="EYO87_13155"
     CDS             <1..753
                     /locus_tag="EYO87_13155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018000445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin biosynthesis protein RibD"
                     /protein_id="HIC66919.1"
                     /translation="PPCAEALVRAGITRVVTALTDPDPRVGGRGHAILRAAGIAVCEG
                     VAEARARALQAGFLLRLSDGRPFVTLKLATSFDGRIATASGESQWITGAGARSHVHVL
                     RLSHDAILVGGGTARADLPSLNVRGLGPVRQPVRVIATTRPLPDLPPEGPDHGPLWQV
                     GGDPRAILADLAARGITRLFCEGGGILSAALVQAGVVDQLIGYTAGIALGAEGRASIA
                     PLALPNLAAAPRFRLVESRAIGPDLFHRWLRA"
     gene            complement(791..2038)
                     /locus_tag="EYO87_13160"
     CDS             complement(791..2038)
                     /locus_tag="EYO87_13160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010398337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66920.1"
                     /translation="MAFGSSVHRPRLFGLPFYAGWGLSDDETMLPADRRGAAAPEDLF
                     AASHLLAPCWYDPCRDALTDFDGAVNQIEAEARVFRQDRGGHLAYGMRAWKRRFILHA
                     FGDSAGLGFARTPSPRVTLAWAGRADTVPQAARVEDGFLRSRGLGAELTPPLSLVADD
                     LGIYYDPGRESRLERLIAAPLPPGGTARARALIGAIRAAGLTKYNLAGDAPDLPPRDG
                     RRRILVPGQVEDDASIRLGAGQERHNLALLARVRADNPDAFVIYKPHPDIEAGLRPGA
                     VSGSELARLADHVARRADPLALLDQVDEVWTITSTLGFEALLRGVPVTVLGAPFYAGW
                     GLTRDLGPVPARRTARPDLAALVHACLIAYPRYRDPVTGLPCPVEIAVARLACRATGH
                     GPGLRLLAKAQGMLAGHSWIWRR"
BASE COUNT          311 a          755 c          748 g          280 t
ORIGIN      
        1 ccgccctgcg ccgaggcgct ggtgcgggcc gggatcaccc gcgtcgtcac cgcgctgacc
       61 gacccggacc cgcgcgtcgg cggacgcggc catgcgatcc tgcgcgcggc cggaatcgcg
      121 gtctgcgagg gcgtggccga ggcccgggcc cgcgcgcttc aggccggttt cctgctgcgc
      181 ctgtccgatg ggcgaccctt cgtgacgctg aagctggcca cctctttcga tggccgcatc
      241 gcgaccgcca gcggcgaaag ccagtggatc accggagccg gggcccgcag ccatgtccat
      301 gtcctgcgcc tgagccatga tgcgatcctg gtcggtggcg gcactgcccg cgccgatctg
      361 ccttcgctga acgtgcgcgg ccttggtccg gtgcgccagc cggtgcgcgt gatcgcgacg
      421 acccggccct tgccggatct gcccccggaa gggccggatc acggcccgct gtggcaggtc
      481 ggcggagacc cgcgggcgat cctggccgat cttgccgccc gcggcatcac ccggcttttc
      541 tgcgagggcg ggggcatcct gtctgccgcg cttgtgcagg cgggcgtggt cgatcaactg
      601 atcggctata cggcgggcat cgccctgggc gccgagggcc gcgcatccat tgcgccgctg
      661 gctctgccaa acctcgccgc ggcgccgcga tttcgccttg tcgaaagccg cgcgatcggc
      721 cctgacctgt tccaccgctg gctgcgggcc tgatccccgg ccgggtcgag ggccgcagcg
      781 cctgcgcccg ctatctgcgc cagatccagc tatgcccggc cagcatcccc tgcgccttgg
      841 ccagaagccg caatcccggc ccatggccgg tcgcgcggca agccagtcgt gcgaccgcga
      901 tctcgaccgg gcagggcagc ccggtcaccg ggtcgcgata acgcggatag gcgatcaggc
      961 aggcatggac cagcgccgca agatcgggac gtgcggtgcg gcgcgcgggc acggggccca
     1021 gatcgcgcgt cagcccccag cctgcataga aaggcgcccc cagaaccgtg accggcaccc
     1081 cgcgcagaag tgcctcgaat cccagcgtcg aggtgatggt ccagacctcg tccacctggt
     1141 ccagcagcgc cagcggatcg gcccggcgcg cgacgtgatc ggccagtcgc gccagttcgg
     1201 atccggacac cgcgccaggc cgcagaccgg cctcgatatc gggatggggc ttgtagatga
     1261 cgaaggcgtc gggattgtcc gccctgacgc gggcaagaag cgcaaggttg tgccgctctt
     1321 gcccggcgcc gaggcggatc gaggcgtcat cctcgacctg gccggggaca aggatgcgcc
     1381 gccgcccgtc gcgtggcggc agatcggggg catcgcccgc caggttgtat ttcgtcaggc
     1441 ccgccgcacg gatcgcgccg atcagagccc gggcccgcgc agtcccgccc ggcggcaggg
     1501 gcgccgcgat caggcgttcc agccggcttt cgcggccggg gtcataatag atgcccagat
     1561 cgtccgcgac cagcgacagc ggcggtgtca gttcggcgcc cagcccgcgc gagcgcagaa
     1621 agccgtcctc gaccctcgcg gcttgcggca ccgtgtcggc gcggcctgcc caggccagcg
     1681 tgacccgcgg cgagggcgtg cgggcgaaac ccagcccggc gctgtcgccg aaggcgtgca
     1741 ggatgaagcg gcgtttccac gcgcgcatgc cataggccag atggccgccg cgatcctgcc
     1801 gaaagacgcg cgcctcggcc tcgatctggt tcacggcacc atcgaaatcg gtcagcgcgt
     1861 cgcggcaggg atcataccag cagggcgcca gcagatgaga ggcggcgaac agatcctcgg
     1921 gcgcagcggc gccgcggcgg tcggcgggca gcatcgtttc atcgtcgctg aggccccagc
     1981 cggcatagaa tggcaggccg aacagccgcg ggcgatgcac cgaagagccg aaggcgatgc
     2041 atcaaacagc cgaaggcaat gcatcgaaca gcagccggcg atgcaccgga cagc
//
LOCUS       DTVW01001005            1324 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2235219, whole
            genome shotgun sequence.
ACCESSION   DTVW01001005 DTVW01000000
VERSION     DTVW01001005.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1324)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1324)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1324
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2235219"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..338
                     /locus_tag="EYO87_13165"
     CDS             <1..338
                     /locus_tag="EYO87_13165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008294964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="NADP-dependent malic enzyme"
                     /protein_id="HIC66921.1"
                     /translation="KMREAMALLDAREPDFMYDGEMHVDAALDPELRERIFPGSRLQG
                     AANVLVFAGTDAASGVRNALKMRAGGLEVGPILMGMGNRAHIVTPSITPRGLLNMSVL
                     AGTPVAHYS"
     gene            348..656
                     /locus_tag="EYO87_13170"
     CDS             348..656
                     /locus_tag="EYO87_13170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012334448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell wall-binding protein"
                     /protein_id="HIC66922.1"
                     /translation="MPGLRARYEQQVRALARRADDLRAAGLAAEEIARGLHAERRDLS
                     ARYKALTPEPLRSRIAARSIAIHGDPDGPSIDSLRAAGKSWDQIAEAAACPGRFPPLG
                     "
     gene            937..>1324
                     /gene="prpE"
                     /locus_tag="EYO87_13175"
                     /gene_synonym="yahU"
     CDS             937..>1324
                     /gene="prpE"
                     /locus_tag="EYO87_13175"
                     /gene_synonym="yahU"
                     /EC_number="6.2.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008885063.1"
                     /note="catalyzes the formation of propionyl-CoA using
                     propionate as a substrate; PrpE from Ralstonia
                     solanacearum can produce acetyl-, propionyl-, butyryl- and
                     acrylyl-coenzyme A, and Salmonella enterica produces
                     propionyl- and butyryl-coenzyme A; not expressed in
                     Escherichia coli when grown on propionate/minimal media;
                     ATP-dependent; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="propionyl-CoA synthetase"
                     /protein_id="HIC66923.1"
                     /translation="MAYKDIYAGWKSDPEGFWMRAAQAIDWDRAPGRAYSDDGPAGEW
                     FAEAMVNTCWNAVDRHVEAGYGDRLAIIHDSPITDSIQRITYAELRDRVARLAGALRT
                     AGVGKGDRVIIYMPMVPKALEAMLACA"
BASE COUNT          220 a          460 c          453 g          191 t
ORIGIN      
        1 gcaagatgcg cgaggccatg gcgctgctgg acgcacgcga acccgatttc atgtacgacg
       61 gcgagatgca tgtcgatgcc gcgctggatc ccgaactgcg cgaacgcatc ttccccggat
      121 cgcggctgca gggcgcggcc aacgtgctgg tctttgcggg cacggatgcg gcctcgggcg
      181 tcaggaacgc actgaagatg cgcgccggcg ggctggaggt cgggccgatc ctgatgggca
      241 tgggcaaccg cgcccatatc gtgacgccct cgatcacccc ccgcggcctg ctgaacatga
      301 gcgtgctggc cggaaccccg gtcgcgcatt acagctgagg cgcggtgatg cccggcctgc
      361 gcgcgcgata cgaacaacag gttcgggcgc tggcgcggcg ggctgatgat ctgcgcgccg
      421 cgggtcttgc cgccgaagag atcgcgcgcg ggcttcacgc cgaacgccgg gacttgtcgg
      481 cccgctacaa ggcgctgacg cccgaaccgc tgcgcagccg catcgccgcc cgcagcatcg
      541 cgatccatgg cgatcccgac ggcccgagca tcgactcgtt gcgcgccgcc ggcaaaagct
      601 gggatcagat cgccgaggcc gctgcgtgtc ctggccgctt tccgccgctg ggatgaaagc
      661 ctgccgccca gatcagcggt ctcgccccca cagccgggcc ctgcaacgcc gcgcgggcaa
      721 gccgagatca aagggccgcg gctgccgccg gtgacgggcg cggagggcat tgaaagaaag
      781 tcgggcgctg gtccggcccg ccacgatccg gccaccgcag ccgcacccgg cgcaattcac
      841 gccgctttcc tggaccgtcc cgccggggat gccgctaaca tggttgcaca gcctccgtgc
      901 tgccccataa caagtcccag ggagaaggag gacgtcatgg cctacaagga catctatgcg
      961 ggctggaaat ccgatccgga ggggttctgg atgcgcgcgg cgcaggcgat cgactgggac
     1021 cgcgcgcccg gccgcgccta ttccgatgat ggcccggcgg gcgaatggtt cgcggaagcg
     1081 atggtcaata cctgctggaa cgccgtggat cgtcatgtcg aggccggcta cggcgaccgc
     1141 cttgccatca tccatgacag ccccatcacc gacagcatcc agcgcatcac ctatgccgag
     1201 cttcgcgacc gcgtggcacg ccttgcaggc gcgctgcgca ccgctggcgt cgggaaaggc
     1261 gaccgcgtca tcatctacat gcccatggtt cccaaggcgc tggaggcgat gctggcctgc
     1321 gcgc
//
LOCUS       DTVW01001006            2409 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2235670, whole
            genome shotgun sequence.
ACCESSION   DTVW01001006 DTVW01000000
VERSION     DTVW01001006.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2409)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2409)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2409
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2235670"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..457)
                     /locus_tag="EYO87_13180"
     CDS             complement(<1..457)
                     /locus_tag="EYO87_13180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011750721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsW"
                     /protein_id="HIC66924.1"
                     /translation="MTEMVFGTTPARAGDPILPRWWRTLDRWALACVVGLFATGLLLG
                     LAASVPLAEKNDLPRFYYVQRQAIFGGLALLVMLVVSMLSPRQVRRLGVLGFIAAFAL
                     LGALPFFGTDFGKGATRWLSLGFVSIQPSEFLKPGFVALSAWFMAASQEV"
     gene            complement(586..1428)
                     /locus_tag="EYO87_13185"
     CDS             complement(586..1428)
                     /locus_tag="EYO87_13185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005978901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1989 domain-containing protein"
                     /protein_id="HIC66925.1"
                     /translation="MQDQPDDAGARRAAIPVDCYPVETLPQPDLPGLLAARNGWRQVD
                     EIVVPPREARCFTVPAGHFFRILCIEGPQVGDLNLWSADLSERFYSGKTRALHGSHLS
                     TGDRLWSSFPGLRPMATITEDTLAWYGIDDFGGSVHDVIGTRCDPYTHNLLTGGHYHH
                     CCHSNLIRALAGARGLTPEQAEAHVHDVLNVFMCTGFARDSGRYFMKASPVRPGDYLE
                     FFAEIDLLGALSACPGGDCSAEHSSDAARCYPLSVQMFRPARTPAGWSPPPPNGYDRS
                     HGAR"
     gene            1513..>2409
                     /gene="chrA"
                     /locus_tag="EYO87_13190"
     CDS             1513..>2409
                     /gene="chrA"
                     /locus_tag="EYO87_13190"
                     /inference="COORDINATES: protein motif:HMM:TIGR00937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromate efflux transporter"
                     /protein_id="HIC66926.1"
                     /translation="MIAPMTDSHRLPEIARAFLRLGLTSFGGPIAHLAYFREDLVLRR
                     NWITDARYAEIVALSQFLPGPASSQTAFALGWQRGGATGALTATLAFTLPSALAMILL
                     AAMVGAAPPDEGLAGGLIAGLKITAVAIVAHAVFGMARVLAPSGARAGIALAALASLS
                     AMPTAAWMQVVVIAGGALAGLLLRVARLAEAQPQQPLRGPSRRNAALCAILFGVLLLL
                     SPLLVGAGIPARIAEVFYRAGALVFGGGHVVLPLLEAGTVQGGLVPEASFLAGYGAAQ
                     AMPGPLFTFAGWLGQIAGGPAGA"
BASE COUNT          382 a          821 c          812 g          394 t
ORIGIN      
        1 cgacctcctg gctggcggcc atgaaccagg ccgagagcgc gacgaagccc ggcttcagga
       61 actcggacgg ctggatcgag acaaagccca ggctcagcca gcgcgtcgcg cccttgccga
      121 aatcggtgcc gaagaaaggc agcgccccga gcaatgcgaa ggccgcgatg aagcccagca
      181 cgcccagccg ccggacctgc cgcggcgaca gcatcgagac gaccagcatc accagcagcg
      241 ccagaccgcc aaagatcgcc tggcgctgga catagtagaa tcgcggcagg tcgttctttt
      301 cggccagcgg caccgatgcc gccagcccca gaagaaggcc tgtcgcaaaa agccccacca
      361 cgcaggccag cgcccacctg tccagggtcc gccaccagcg tggaagaatc ggatcccccg
      421 ccctcgcggg ggtcgtgcca aagaccatct cggtcatggg aataccgccg tcactgcctc
      481 tgcctcgtcc ggttttcccg gatctgggac agagaatagc gcggttttcc gccccgcgct
      541 acagccgaat gcagcctttg cacgcataag ttgaatttac gcgcctcagc gcgcgccatg
      601 gctgcggtca tagccgttcg gtggcggcgg cgaccagcct gcgggcgtcc gggcgggccg
      661 gaacatctgc accgaaagcg gatagcagcg cgccgcatcc gaggaatgtt cggccgaaca
      721 atccccgccc ggacaggcgg acagcgcccc cagcaggtcg atttcggcga agaattccag
      781 ataatcgccg ggccggacgg ggctggcctt catgaaatat cgcccggaat cacgggcgaa
      841 gccggtgcac atgaagacgt tcagcacatc gtgaacatgg gcctcggcct gttccggcgt
      901 caggccccgc gccccggcca gtgcgcggat caggttggaa tggcagcaat gatgataatg
      961 cccgcccgtc agcaaattat gcgtataggg atcgcagcgt gtgccgatca catcgtggac
     1021 gctgccgccg aaatcgtcga tgccatacca ggccagcgtg tcctcggtga tcgtggccat
     1081 cggccgcagg cctgggaacg aggaccacaa ccggtcgccc gtgctcagat ggctgccatg
     1141 cagggcccgg gtcttgccgg aatagaagcg ttccgacaga tccgccgacc acaggttcag
     1201 atccccgacc tggggtccct cgatgcagag gatgcggaag aaatggccgg cgggcacggt
     1261 gaaacagcgc gcctcacgag gcgggaccac gatttcgtcc acctgccgcc agccgtttcg
     1321 cgcggccaga aggccgggca gatccggctg cggcagtgtc tcgacgggat aacagtcgac
     1381 agggatcgcg gcgcggcgtg cccctgcatc atcgggttgg tcctgcatcg tctttccccc
     1441 tcttcatcac gcgcgatcca tccacggcag cgccacgatt caccaggcat tttcccgcca
     1501 cgcgttacca ttatgatcgc gccgatgacc gattcgcacc gcctgcccga aatcgcccgc
     1561 gcttttctgc gcctcggcct gaccagtttc ggcggcccca tcgcccatct ggcctatttc
     1621 cgcgaggatc tggtcctccg ccgcaactgg atcactgatg cccgctatgc cgagatcgtc
     1681 gcgctgagcc agtttctgcc tggtcccgcc tcgtcccaga ccgcctttgc cctgggctgg
     1741 cagcgcggcg gcgcgacggg ggcgttgacg gcgacgctgg cctttaccct gccctcggcg
     1801 ctggcgatga ttctgctggc ggcgatggtc ggcgcggcgc cgcccgacga ggggctggcc
     1861 ggcggcctga ttgccgggct gaagattacc gccgtggcga tcgtggccca cgcggttttc
     1921 ggcatggcgc gcgtgctggc gccgtcgggc gcgcgggcgg ggatcgcgct ggccgcgctg
     1981 gcgtcgctgt cggcgatgcc gaccgccgcc tggatgcagg tcgtggtcat cgccggcggt
     2041 gcgcttgcgg gtctgctgct gcgggtggca cgcctggccg aggcacagcc tcagcagccg
     2101 ctgcgcggcc cgtcgcggcg caacgcggcg ctgtgcgcga tcctgttcgg ggtcttgctg
     2161 ctgctttcgc cgctgctggt cggtgcgggc attccggccc ggatcgcgga ggtcttttac
     2221 cgcgcggggg cattggtttt cggcggcggc catgtggtgc tgccactgct cgaagcggga
     2281 accgtgcagg gcggcttggt gcccgaggcc agtttcctgg ccggctatgg agcggcgcag
     2341 gccatgccgg ggccgctttt cacctttgcc ggctggctgg gacagatcgc gggcggcccg
     2401 gcgggcgcg
//
LOCUS       DTVW01001007            1687 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2237639, whole
            genome shotgun sequence.
ACCESSION   DTVW01001007 DTVW01000000
VERSION     DTVW01001007.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1687)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1687)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1687
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2237639"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..368)
                     /locus_tag="EYO87_13195"
     CDS             complement(<1..368)
                     /locus_tag="EYO87_13195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007118655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:proton antiporter"
                     /protein_id="HIC66927.1"
                     /translation="MDIVVLTTITAGLFILIALAEPLAARLSLPYSVILAAFGILIGA
                     AALFLLRTDLTDALNPVAESILALPIRSNVFLYVFLPTLIFQATLGMNVRRMADDWVP
                     ILVLAVVAVFVATLTIGYALA"
     gene            597..1382
                     /locus_tag="EYO87_13200"
     CDS             597..1382
                     /locus_tag="EYO87_13200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005852654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3445 domain-containing protein"
                     /protein_id="HIC66928.1"
                     /translation="MSTILQQRLAFAPWADPRTRRLPGTIPVTEAEWLLTDDAFAAQM
                     ALRDDLIATRPGRVHALHEDARPAAAELYRRIMRLLPDRGYDCGPAVRRPDGVLVLPD
                     PQMPLMTLGRFVAEDLCLMIPGPDGRHVLGGAILCFPAGWSLSQKFMRPMMRIHRPVA
                     SYTEDIGRRVQRLLDGLRPGPGLMRGTAHHSDAPLHHPLTEEQDRIPPDPAPFIRVER
                     QCLFRLPETGAVVFSIHTSVIRPEALDPDQRRALRQFPIRHGT"
     gene            1491..>1687
                     /locus_tag="EYO87_13205"
     CDS             1491..>1687
                     /locus_tag="EYO87_13205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014898857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkene reductase"
                     /protein_id="HIC66929.1"
                     /translation="MPTLFDPLTLGAVTLKNRLVMAPLTRARAGGSRVPNAMMAEYYR
                     QRASAGLILTEATSVTPMGVG"
BASE COUNT          289 a          600 c          553 g          245 t
ORIGIN      
        1 gccagcgcgt agccgatggt cagcgtggcc acgaagaccg ccaccaccgc cagcaccagg
       61 atcggcaccc agtcatcggc catccggcgg acattcatgc ccagcgtcgc ctgaaagatc
      121 agcgtcggca ggaagacata aagaaagacg ttggaccgga tcggcagcgc caggatcgat
      181 tccgccaccg ggttcagcgc atcggtcaga tcggtgcgca gcaggaacag cgccgcagcg
      241 ccgatcagga tgccgaaagc cgccagaatc acgctgtagg gcagcgaaag acgcgccgcc
      301 agcggctcgg ccagggcgat caggatgaac agtcccgcag tgatggtggt cagaacaacg
      361 atgtccatgg gcctgcgata actggaaaat cgccggcagg gaatatggca ggaccccgcc
      421 ggatcgcgct ttttcgtgac tgcgccaccg gcttgcgcag cccgcgcctg cgccgggggt
      481 cccgggggac gcgcagtccc cccggcggtc gcgggacgca ggaaggcagg caacacgggc
      541 agcccggccg acaaggtcac ttgcccctgc cgccggcacg ggcatgatgc gggcagatga
      601 gcacgatcct gcaacagcgg ctggctttcg cgccctgggc cgatccgcgc acaaggcgcc
      661 tgcccggcac cattcccgtg accgaggccg aatggctgct gaccgacgat gccttcgccg
      721 ctcagatggc gctgcgcgac gatctgatcg ccacccggcc cggccgcgtg cacgccttgc
      781 acgaagacgc ccgtcccgcc gcggccgagc tttaccgccg gatcatgcgc ctgctgcccg
      841 accgcggcta tgattgcggc ccggcggtcc ggcgtcccga tggcgttctc gtgctgccgg
      901 atccgcagat gccgctgatg acgctgggcc ggtttgtggc cgaggatctg tgcctgatga
      961 tccccggccc ggatggccgg catgtgctgg gcggcgcgat cctgtgtttt cctgcgggct
     1021 ggtccctgtc gcagaaattc atgcgcccga tgatgcgcat ccatcgcccc gtcgcgtcct
     1081 ataccgagga tatcggccgc cgcgtccagc ggctgctgga tgggctgcgc cccggtccgg
     1141 gcctgatgcg cggcacggcg catcattccg acgcgccgct gcaccacccc ctgaccgagg
     1201 aacaggaccg catcccgccc gaccccgcgc ccttcatccg ggtcgagcgg caatgtctgt
     1261 tccgcctgcc cgaaaccggc gcggtggtct tctcgatcca taccagcgtc atccgccccg
     1321 aggcgctgga ccccgatcag cgccgggccc tgcgacaatt tccgatccgc cacggcacct
     1381 gaagccatgc gccagatggg acgcaagctt gcgccgcgcg ccgttgaaaa cctccggccc
     1441 gccgcacagg tcgaatggtc aaagcacagg acaggcagaa aggacgccag atgccaaccc
     1501 ttttcgatcc gctgacactc ggggccgtga ccttgaagaa ccgtctcgtg atggcgccgc
     1561 tgacgcgcgc gcgcgccggc ggatcccgcg tcccgaatgc gatgatggcc gaatattacc
     1621 gccagcgcgc cagcgccggc ctgatcctga ccgaggcgac gtcggtcacg ccgatggggg
     1681 tgggcta
//
LOCUS       DTVW01001008            1158 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_224142, whole
            genome shotgun sequence.
ACCESSION   DTVW01001008 DTVW01000000
VERSION     DTVW01001008.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1158)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1158)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1158
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_224142"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>1158
                     /locus_tag="EYO87_13210"
     CDS             <1..>1158
                     /locus_tag="EYO87_13210"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352559.1"
                     /note="Catalyzes the rate-limiting step in dNTP synthesis;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="vitamin B12-dependent ribonucleotide reductase"
                     /protein_id="HIC66930.1"
                     /translation="IEDATDPAVNDGLKAAIRGAKKAMIPETYINRVLQYARQGFDSI
                     EFPTYDTDWDSEAYVSVSGQNSNNSVRVTDAFLNAVRDDRPWELLRRTDGKVARTVSA
                     RELWDQVGHAAWACADPGIQFHDTVNAWHTCPEDGAIRGSNPCSEYMFLDDTACNLAS
                     MNLLSFWTGERFDADAYVHATRLWTVTLEISVLMAQFPSKEIAQRSYDYRTLGLGYAN
                     IGGLLMNMGLGYDSDQGRALCGALTAIMTGIAYATSAEMASELGAFPGYGRNAEHMLR
                     VIRNHRAAAHGTEAYHGINVRPVALDAGNCPDPRLVALAREAWDEALTLGEDHGFRNA
                     QSTVIAPTGTIGLVMDCDTTGIEPDFALVKFKKLAGGGYFKIINQLVPKAL"
BASE COUNT          225 a          374 c          363 g          196 t
ORIGIN      
        1 gcatcgagga tgcgaccgac ccggccgtca atgacggtct gaaagctgcg atccggggtg
       61 ccaagaaggc gatgatacca gaaacctata tcaaccgcgt gctgcaatat gcccgtcagg
      121 gtttcgacag tatcgaattc ccgacctacg ataccgactg ggacagcgag gcctatgtca
      181 gcgtctcggg acagaacagc aacaattcgg tccgcgtcac cgacgccttc ctgaacgcgg
      241 tccgcgatga caggccgtgg gagctgctgc gccgcaccga tggcaaggtc gccaggaccg
      301 tcagcgcccg cgaattgtgg gatcaggtcg gtcatgccgc ctgggcctgc gccgatccgg
      361 gaatccagtt ccacgatacc gtcaatgcct ggcatacctg ccccgaggac ggcgccatcc
      421 gcggatcgaa cccgtgcagc gaatacatgt tcctcgacga cacggcctgc aacctggcct
      481 cgatgaacct tctgagcttc tggaccggcg agcgtttcga cgccgatgcc tatgtccacg
      541 ccacgcggct gtggaccgtg acgctggaga tcagcgtgct gatggcgcaa ttccccagca
      601 aggagatcgc gcagcgcagc tatgattacc gcacgctggg cctgggctat gccaatatcg
      661 gcggcctgct gatgaacatg ggcctgggtt atgacagtga tcagggccgc gcgctgtgcg
      721 gcgcgctgac cgcgatcatg accggcattg cctatgccac ctcggccgag atggcgtcgg
      781 agctgggggc gtttcccgga tacgggcgca acgccgagca catgctgcgc gtgattcgca
      841 accaccgcgc cgcggcccac ggaaccgagg cctatcacgg catcaatgtc cgccccgtgg
      901 cgctggatgc cggcaattgc cccgatccgc gtctggtcgc actggcccgc gaggcctggg
      961 acgaagcgct gacgctgggc gaggatcacg ggttccgcaa cgcccagtcg accgtcattg
     1021 cgccaaccgg cacgatcggg ctggtcatgg attgcgacac gaccggaatc gagcccgact
     1081 tcgcactggt caagttcaag aagctggccg gcggcggtta tttcaagatc atcaaccagt
     1141 tggtcccgaa agccctac
//
LOCUS       DTVW01001009            3248 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2241471, whole
            genome shotgun sequence.
ACCESSION   DTVW01001009 DTVW01000000
VERSION     DTVW01001009.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3248)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3248)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3248
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2241471"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..410)
                     /locus_tag="EYO87_13215"
     CDS             complement(<1..410)
                     /locus_tag="EYO87_13215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011049390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HIC66931.1"
                     /translation="MGYKVVVAGATGNVGREMLNILDERQFPVDEIAVLASRRSQGTE
                     VSFGDRTLKIQDIDQFDFAGWDIALFSIGSDATKKYAPLAAKAGCVVIDNSSLYRYDP
                     DVPLIVPEVNPEAITGYSKKNIIANPNCSTAQMVV"
     gene            complement(577..1194)
                     /locus_tag="EYO87_13220"
     CDS             complement(577..1194)
                     /locus_tag="EYO87_13220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66932.1"
                     /translation="MNRLRFLAARSLRQETALMRLSVPQRELLADLAGRSVALIGNAR
                     ALAGAAHGSAIDKADLVIRINRAPMPAAPSHGSRTDWLALAVRLAAPDRDRIGPARIL
                     WMSPKRKRLDWRTAASPGFYLHPLGDYCALRDRLGAPPTTGAMLIDLALRSGLASLTL
                     YGFDFFASQSLSGRRTAAQVPHDFGAEAAWVGDMQRRDPRLDLVA"
     gene            complement(1191..2231)
                     /locus_tag="EYO87_13225"
     CDS             complement(1191..2231)
                     /locus_tag="EYO87_13225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HIC66933.1"
                     /translation="MSDILLVVAPNLKRRLSGVTATVVRLIPVQAKMIAIRATGPGLP
                     PDVPHIPLLRAATLPRDRWRVWHARRNTEMLLGLILRHLLGRKYRLMFTSAAQRRHSR
                     FTKWLIRRQEALVATTPQAAAYLERPARVVMHGVDTRIFHPAPDRAALRRQLGLDPDA
                     VLIGCFGRVREQKGVDLLVRAGLDLLAARPRAQIIFTGRITPDNRAFADGLQDRIGRA
                     GLQDRIRFLGELPWDRLVRHYQALDLFAAPARWEGFGLTPLEAMACGVPAIGARVGAY
                     EALIRDGETGSLVQTGDAGALSAALARWLDDDAARAAAGRAARIHVEANHSIQAEARA
                     LVRIYHDLLSQP"
     gene            complement(2298..2696)
                     /locus_tag="EYO87_13230"
     CDS             complement(2298..2696)
                     /locus_tag="EYO87_13230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011746786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66934.1"
                     /translation="MLMITALAGGALLLAGAEISSGGQRLSVPLPDVSAMNRTEADML
                     ARQLAEIEVITANCPDYAITDGEWTLLSGTGDLLAAQIGVDPTQYERDYFGPAFTLLD
                     DPSSCDRIGPEARPLIDRLIRMGGGTKLQR"
     gene            2847..>3248
                     /locus_tag="EYO87_13235"
     CDS             2847..>3248
                     /locus_tag="EYO87_13235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_353942.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydrogenase"
                     /protein_id="HIC66935.1"
                     /translation="MADRFSLLVLPGDGIGPEVMAEVVKVIGWFEANRGMSFEIGHDL
                     VGGAAYDRHGKPLADETMARAQAVDAVLLGAVGGPKYDDLDFSLKPERGLLRLRKEMD
                     LFANLRPAQCFDSLADFSSLKREVVAGLDILI"
BASE COUNT          530 a         1076 c         1128 g          514 t
ORIGIN      
        1 accaccatct gcgcggtcga acaattggga ttggcgatga tgttcttttt cgaatagccg
       61 gtgatcgcct ccggattcac ttcgggcacg atcagcggga cgtcgggatc atagcgatag
      121 agcgagctgt tatcgatgac cacgcaaccg gccttggccg cgaggggggc gtatttcttc
      181 gtcgcgtccg acccgatgga gaacagcgcg atgtcccagc cggcaaagtc gaactggtcg
      241 atatcctgga ttttcagggt cctgtcgcca aaactgacct cggtgccctg cgaacggcgc
      301 gaggccagga cggcgatttc atcgaccgga aactggcgct cgtccagaat gttcagcatc
      361 tcgcggccca cattgcccgt ggcgccggca acaacgactt tgtagcccat tggggactcc
      421 tgtcttctgc ggttggcggc gtgtagcgca ggcgagggcg ggatggaagg ggcggagcct
      481 cgcaggcagg cggtgcccgg ccgcgccccg atcgcggata gacgcccagc ggcagcgacc
      541 gggacgggct gcgcccgtcc cgtccccttc gcggtctcaa gccaccaggt cgaggcgggg
      601 gtcgcggcgc tgcatgtccc cgacccaggc cgcttcggcg ccgaaatcat gtggcacctg
      661 cgcggcggtg cgacgtcccg acaggctctg gctggcaaag aaatcgaaac catagagtgt
      721 cagcgaggca agcccggacc gcagcgcaag gtcgatcagc atcgcccctg tcgtgggcgg
      781 cgcgcccagc cggtcgcgca gggcgcaata atcgcccagc ggatgcagat agaagccggg
      841 gctggccgcc gtccgccagt ccagccgctt gcgcttgggc gacatccaca ggatgcgcgc
      901 gggcccgatg cggtcgcgat caggcgcggc cagccgcacc gccagggcca gccagtcggt
      961 gcggctgcca tggctggggg ccgcgggcat cggcgcgcgg ttgatgcgga tcaccaggtc
     1021 ggctttgtcg atggcggagc catgggccgc cccggccaat gcgcgggcat tgccgatcag
     1081 cgcgaccgac cggccggcca gatcggccag cagttcccgt tgcggcaccg acaggcgcat
     1141 cagcgcggtc tcttggcgca ggctgcgcgc ggccagaaag cgcaggcggt tcatggctgc
     1201 gacagcagat cgtgatagat gcggaccagc gcgcgagcct cggcctggat cgagtggttc
     1261 gcctcgacat ggatgcgtgc cgcgcgtccc gcggccgcgc gcgccgcatc gtcgtccagc
     1321 cagcgggcca gcgccgccga caaggccccc gcatcgccgg tctggaccag gctgccggtc
     1381 tcgccgtcgc ggatcagcgc ctcataggcg ccgacgcggg caccgatggc gggaacgccg
     1441 caggccatcg cctccagcgg ggtcagaccg aagccttccc agcgggcggg cgcggcgaaa
     1501 aggtccaggg cctggtaatg ccgcaccagc cggtcccagg gcaattcccc cagaaagcgg
     1561 atccggtcct gcaacccggc cctgccgatc cggtcctgca acccgtcggc gaaggcgcgg
     1621 ttgtcggggg taatgcgccc ggtgaagatg atctgcgcgc gcggtcgggc ggccagcaga
     1681 tcgaggcccg cgcggaccag caggtcgacg cccttctgtt cgcgcacacg cccgaaacag
     1741 ccaatcagca ccgcatccgg atccagcccg agctggcggc gcagcgcggc gcgatccggc
     1801 gcggggtgga agatccgagt gtccacgcca tgcatgacga cgcgggcggg ccgttccaga
     1861 taggccgcgg cctgcggcgt ggtcgccacc agcgcctcct gccggcgaat cagccatttc
     1921 gtgaagcggc tatggcggcg ctgcgcggcc gaggtgaaca tcagccggta tttccgcccc
     1981 agcagatggc gcaggatcag tccaagcagc atttccgtgt tgcgccgcgc gtgccagaca
     2041 cgccagcggt cgcgcggcag ggtcgctgcg cgcagcagcg ggatatgcgg cacatcgggc
     2101 ggcaggcccg gcccggtggc gcggatcgcg atcatctttg cctgaaccgg gatcagccgc
     2161 acaaccgtcg ccgtgacgcc cgaaaggcgg cgtttgagat tcggggcgac gaccagcaga
     2221 atatcggaca tgggcggcct ttgagcgatg ggtcggtccg cagcataatc aagccgaggc
     2281 ccgagggaca gggccggtca tcgctgcagt ttggtcccgc cacccatccg gatcagccgg
     2341 tcgatcagcg gccgcgcctc ggggccgatg cggtcgcagg acgaggggtc gtccagcagc
     2401 gtgaaggccg gtccgaaata atcgcgttca tattgcgtgg ggtcgacgcc gatctgcgcc
     2461 gccagcagat cgccggtgcc gctgagcagg gtccattcgc catcggtgat ggcataatcg
     2521 ggacagttcg cggtgatcac ctcgatctcg gccagttgcc gggccagcat gtcggcctcg
     2581 gtccggttca tggccgagac atcgggcagc ggcacgctga gccgttgccc gccggacgag
     2641 atctcggctc cggccagcag cagcgcgcct ccggccagtg ccgtgatcat cagcatgtcc
     2701 cacgctcgca tggtcgattc cccttgcctc tcgcggtccc aaccgttctg cgtgccaggc
     2761 gccgcccgca acccaattca ccgtgaactt gaccctgctg cgggtcgggt ctaaccgggg
     2821 tcattcccga tcctgaggag gactgcatgg ccgatcgttt ctcgcttctc gttctgcccg
     2881 gcgacggaat cggccccgag gtcatggccg aggtggtcaa ggtgatcggc tggttcgagg
     2941 ccaatcgcgg catgtccttc gagatcggtc acgatctggt gggcggcgcg gcctatgacc
     3001 ggcacggaaa gcccctggcg gacgagacca tggcccgggc acaagcggtc gatgcggtgc
     3061 tgctgggcgc ggtcgggggg ccgaaatacg acgatctcga tttcagtctc aagcccgaac
     3121 gcggcctgct gcgcctgcgc aaggaaatgg acctgtttgc caacttgcgt ccagcgcaat
     3181 gttttgattc tcttgcagat ttttcgtcac tcaagcgtga ggtcgtggcc ggtctggaca
     3241 tcctgatc
//
LOCUS       DTVW01001010            1201 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2241596, whole
            genome shotgun sequence.
ACCESSION   DTVW01001010 DTVW01000000
VERSION     DTVW01001010.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1201)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1201)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1201
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2241596"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..731)
                     /locus_tag="EYO87_13240"
     CDS             complement(<1..731)
                     /locus_tag="EYO87_13240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HIC66936.1"
                     /translation="MASMTDLSGMDVATDARLVPLWDRVIRGILSHSAATGDDLNAVI
                     AADRDFALAQAIRGLSCLMLGRAEMTQTAHEAMARARTAARRRPPTPREAGYVAALEL
                     WLSGRPSAAAARVQQILDDHPRDALAMKLVHAIHFIMGRPQAMRRSVEAVLPHWEDHP
                     ARGYLLGCHAFTLEETGEYAAAEAAGKHGVDLAPDDAWGLHAVAHVHDSTGRAREGLD
                     WLTGRESSWAHCNNFRFHVWWHRAL"
     gene            913..>1201
                     /locus_tag="EYO87_13245"
     CDS             913..>1201
                     /locus_tag="EYO87_13245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="YeeE/YedE family protein"
                     /protein_id="HIC66937.1"
                     /translation="MPNKTPLLLSILALAALLASQAMMGRAAGMGAALAGFLGGFAFY
                     HAAFGFAGGWRRCLTQGDGSGVRAQVLLLALILPVSLTLIALGGASGWVVPV"
BASE COUNT          168 a          422 c          416 g          195 t
ORIGIN      
        1 atcagcgccc ggtgccacca gacatggaag cggaaattgt tgcaatgcgc ccaggacgat
       61 tcgcgtcccg tcagccaatc cagcccctcg cgcgcgcgtc ccgtgctgtc atggacatgg
      121 gccaccgcgt gcagccccca ggcatcgtcc ggagccaggt ccaccccgtg ctttccggcc
      181 gcctcggcgg cggcgtattc gccggtctct tccagcgtga aggcatggca gcccagcaga
      241 tagccgcgcg ccgggtgatc ttcccagtgt ggcagcaccg cctcgaccga gcggcgcatc
      301 gcctgcgggc ggcccatgat gaaatggatc gcgtggacca gcttcatcgc cagcgcgtcg
      361 cgcggatggt cgtccaggat ctgctggacc cgcgcggcgg cggccgaggg ccggcccgac
      421 agccaaagtt ccagcgccgc gacatagccc gcctcgcgcg gggtcggcgg gcggcgtcgg
      481 gcggcggtcc gcgcccgcgc cattgcctcg tgggcggtct gcgtcatctc ggcacggccc
      541 agcatcaggc aggacaggcc ccggatcgcc tgggccagcg caaagtcgcg gtcggccgcg
      601 attaccgcgt tcagatcgtc tccggtggcg gctgaatggg acaggatgcc gcggatcacg
      661 cgatcccaca gcggcaccag ccgcgcgtcg gtcgcgacgt ccattcccga caggtccgtc
      721 atcgatgcca tgctggcctc ctgtgatcaa aatcgcgcgt ggctggcgcc tgaggcccgg
      781 caaccccttt gcatgacacc gcatccgggg ttctatacga acaccgccgc cggaatgtta
      841 cagtttttgt catacagggg gcgaaccact tgcggacggc ggcaagaagc cgcccctggg
      901 gggacaggcg ccatgcccaa caagacccca cttctgctgt ccatcctggc gctggccgcg
      961 ctgctggctt cgcaggcgat gatggggcgg gccgcgggca tgggcgcggc gctggccggg
     1021 tttctgggcg gctttgcctt ctatcacgca gccttcggct ttgccggagg ctggcggcgc
     1081 tgtctgacac agggcgacgg cagcggcgtc cgcgcgcagg tgctgcttct ggcgctgatc
     1141 ctgccggtca gcctgacgct gattgccctc ggcggcgcct cgggctgggt cgtgccggtc
     1201 g
//
LOCUS       DTVW01001011            1290 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2243616, whole
            genome shotgun sequence.
ACCESSION   DTVW01001011 DTVW01000000
VERSION     DTVW01001011.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1290)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1290)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1290
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2243616"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>1290
                     /locus_tag="EYO87_13250"
     CDS             <1..>1290
                     /locus_tag="EYO87_13250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_354165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="formate dehydrogenase subunit alpha"
                     /protein_id="HIC66938.1"
                     /translation="PYKHGKANRGHSCVKGRFAYGYANHRDRILKPMIRDRIDEPWRE
                     VEWDEALAFAAGRMSALQQKYGRRSIGVITSSRCTNEETYLVQKLARAVFLNNNTDTC
                     ARVCHSPTGYGLGKTFGTSAGTQDFDSVEKADVVMIIGANPTDGHPVFASRLKKRLRQ
                     GARLIVVDPRRTDIVRSPHVEAAYHLPLRPGTNVAVVTAMAHVIVTEGLVDEAFIRER
                     CDWDEFQHYAEFVSQDRHSPETMQPLTGVPAADLRAAARLYATGGNGAIYYGLGVTEH
                     SQGSTTVMGIANLAMLTGNVGREGVGVNPLRGQNNVQGSCDMGSFPHELPGYRHVKLP
                     DVRKIFETAWGVEIDPEPGLRIPNMLDAAVEGTFKGLYCQGEDILQSDPDTHHVAAGL
                     KAMECVIVHDLFLNETANYAHVFLPGSSFLEKEGTFT"
BASE COUNT          245 a          422 c          403 g          220 t
ORIGIN      
        1 cccctacaag catggcaagg cgaaccgggg ccattcctgc gtcaagggcc gcttcgccta
       61 tggctatgcc aaccaccgcg accgcatcct caagccgatg atccgcgacc gcatcgacga
      121 gccctggcgc gaggtcgaat gggacgaggc tctggccttt gccgccggcc ggatgagtgc
      181 gttgcagcag aaatacggcc gccggtcgat cggcgtcatc acctcaagcc gctgcaccaa
      241 cgaggaaacc tacctggtgc agaaactggc gcgggcggtg tttctgaaca acaacaccga
      301 tacctgcgcc cgggtctgcc attcgccgac cggctacgga ctgggcaaga ccttcggcac
      361 ctcggccggc acgcaggatt tcgacagtgt cgagaaggcc gatgtggtga tgatcatcgg
      421 tgccaatccg accgatggcc acccggtctt cgccagccgg ctgaaaaagc ggctgcgtca
      481 gggcgcgcgg ctgatcgtcg tggatccgcg ccgcaccgat atcgtgcgca gcccgcatgt
      541 cgaggcagcc tatcacctgc cgctgcggcc gggcaccaac gtcgccgtcg tcaccgcaat
      601 ggcgcatgtc atcgtgaccg aggggctggt ggacgaagcg ttcatccgcg agcgctgtga
      661 ctgggacgaa tttcagcatt acgccgaatt cgtcagtcag gaccgccaca gccccgaaac
      721 catgcagccg ctgaccggcg ttcccgccgc cgatctgcgt gccgccgcgc ggctttacgc
      781 gaccggcggc aacggggcga tctattacgg tctgggcgtg accgaacatt cccagggctc
      841 gaccacggtc atggggatcg ccaaccttgc gatgctgacc ggcaatgtcg gacgcgaggg
      901 cgtcggcgtg aaccctctgc gggggcagaa caacgtccag ggttcctgcg acatgggcag
      961 ctttccgcat gaactgcccg gctatcgcca tgtgaaactg cccgatgtcc gcaagatctt
     1021 cgagacggcg tggggggtcg agatcgaccc cgaacccggc ctgcgcatcc ccaacatgct
     1081 tgatgcggcg gtcgagggaa cgttcaaggg gctttactgc cagggcgagg atatcctgca
     1141 atcggacccc gatacccacc atgtcgcggc gggcctgaag gcgatggaat gcgtcatcgt
     1201 ccatgatctg tttctgaacg agaccgcgaa ttacgcccat gtcttcctgc cgggttcgtc
     1261 cttcctcgaa aaggagggca cctttaccaa
//
LOCUS       DTVW01001012            2213 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2246874, whole
            genome shotgun sequence.
ACCESSION   DTVW01001012 DTVW01000000
VERSION     DTVW01001012.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2213)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2213)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2213
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2246874"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1220
                     /locus_tag="EYO87_13255"
     CDS             <1..1220
                     /locus_tag="EYO87_13255"
                     /inference="COORDINATES: protein motif:HMM:PF00171.20"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HIC66939.1"
                     /translation="LADAIEERKDVFGQLDALDNGKPFAIARDVDAVWSARHFRYFAG
                     WPDKIEGATIPVSTPSRRNHTRIEPMGVCGLITPWNYPTLMVAWKLAPALATGNTIVL
                     KPAEQTPLSALYLADLALEVGFPPGVLNVVPGSGRDAGAALASHPGVDKIGFTGSTAT
                     GREIVRASAGNLKKVSLELGGKAANIIFADADLELAIPGAFWALFGNNGQSCTAGARL
                     FVHRSLHDRVLEGLRKLADGLSIGPGMDARGHDLGPVISRPQMDKVLGYIADGRDAGA
                     ECVAGARRGDAGWFVQPTILTGVRDDMRIAREEIFGPVLSVLTFDDEDEVLARANDTE
                     YGLAAGCWTRDAGRVARMGAGLHAGTVWINCWGDTDAASPFGGMGQSGYGREMGRDAL
                     ALYSQTKSVWQGV"
     gene            1270..2007
                     /locus_tag="EYO87_13260"
     CDS             1270..2007
                     /locus_tag="EYO87_13260"
                     /inference="COORDINATES: protein motif:HMM:PF00392.19"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HIC66940.1"
                     /translation="MAEQNVPRYQTIHEEMLARLKQGLYSVGTRLPSEEALAKSFGVS
                     RVTVRRSLEMLVSAGYLISRQGSGYTVSTLSPPSTTCLISFTDAILKSGRVPGARLIG
                     IDRFDGDAPATVQALFDEPVVRIQRLRMVDGQPRMLVNTWVPTRLVPDLSDADFPEDG
                     PNQSILRILVRRFGLEWGSACETIRPQLASDEVARLLGLAPNTPILAQACSALDDSGA
                     PVFYDEVYRDSPITYELVGASRQERSE"
     gene            2007..>2213
                     /locus_tag="EYO87_13265"
     CDS             2007..>2213
                     /locus_tag="EYO87_13265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66941.1"
                     /translation="MNVRFRIGLINASLPSYFPRRHGVFEAAEKMLADLTADLGIGLV
                     SAPDLPMDARAAQQAVDHCRAEGAG"
BASE COUNT          374 a          679 c          770 g          390 t
ORIGIN      
        1 aactggccga cgcgatcgag gagcgcaagg atgtcttcgg tcagcttgac gcgctggaca
       61 atggcaagcc cttcgcgatc gcgcgcgatg tcgacgcggt ctggtcggcg cggcatttcc
      121 gctatttcgc gggctggccc gacaagatcg aaggcgccac gatccccgta tccaccccca
      181 gtcgccggaa ccacacgcgg atcgagccga tgggcgtctg cgggctgatc acaccttgga
      241 actacccgac gctgatggtc gcgtggaagc tggccccggc cctggcgacg ggcaacacca
      301 tcgtgttgaa gcccgccgaa caaaccccgc tcagcgccct gtatctggcc gatctggcac
      361 tggaggtcgg gtttccgccc ggtgtgctga acgtcgttcc gggatcgggc cgcgatgccg
      421 gcgccgcgct tgcgtcacat cccggcgtcg acaagatcgg gtttacggga tcgacggcaa
      481 ccgggcgcga gatcgtcagg gcttcggcag ggaacctcaa gaaggtctcg cttgaactgg
      541 gtggcaaggc cgccaacatc atcttcgccg acgcggatct ggaacttgcg atcccgggcg
      601 cgttctgggc ccttttcggc aataacggtc aatcctgcac cgccggcgcc cggctgttcg
      661 tgcatcgcag cctgcatgat cgggtgctgg aggggctgcg caagctggct gacgggctgt
      721 cgatcgggcc ggggatggat gccaggggcc acgatcttgg accggtgatt tcgcgtccgc
      781 agatggacaa ggttctgggc tatatcgccg atgggcgcga tgccggcgcc gaatgcgtgg
      841 ccggcgcgcg gcggggcgac gccggatggt tcgtgcagcc cacgatcctg accggggttc
      901 gcgacgatat gcgcattgcg cgcgaggaaa tctttggccc ggtcctgtct gtcctgacct
      961 tcgatgacga ggacgaggtg ctggcccgtg cgaacgatac cgaatatggc cttgcggcgg
     1021 gttgctggac gcgggacgct ggacgtgtgg caagaatggg cgcgggcctg catgccggaa
     1081 cggtctggat caattgctgg ggcgataccg acgcggcctc gccctttggc ggcatgggcc
     1141 aaagcggata tggccgcgag atggggcgcg acgcactggc gctttacagc cagacgaaat
     1201 cggtttggca aggcgtgtag ccgcgacggt gcaacggaaa gtgctgccat cgcaaggaga
     1261 ggatgacaca tggccgagca gaatgtgccg cgatatcaga ccatccacga agagatgctg
     1321 gcacggttga agcaggggct gtattcggtc ggcacacggt tgccctcgga agaagcgctt
     1381 gcgaaatcat tcggtgtcag tcgggtgacg gtgcgccgct cgctcgagat gttggtcagc
     1441 gcgggttacc tgatttcacg gcaaggcagc ggctacacgg tcagcaccct gtcgccgcca
     1501 tcgacgacct gcctgatctc gtttaccgat gcgatcctga aaagcggccg cgtgccgggt
     1561 gcgcgactga tcgggatcga ccgcttcgac ggcgacgcgc ccgcgacggt gcaggccctg
     1621 ttcgacgagc cggtcgtccg gatccagcgg ctgcgcatgg tggacgggca accgcggatg
     1681 cttgtgaaca cctgggtgcc gacccgcctg gtgccggatt tgtccgatgc ggatttcccc
     1741 gaggatgggc cgaaccagtc gatcctgcgg atcctggtcc ggcgcttcgg cctggaatgg
     1801 ggcagcgcat gcgagacgat ccgcccccag ctggcctcgg acgaagtggc caggctgttg
     1861 ggcctggccc cgaacacgcc gatcctggcg caggcatgtt cggccctgga cgacagcggc
     1921 gcgccggttt tctatgacga agtatatcgc gattccccga tcacctacga actggtcggc
     1981 gcgtcgcggc aggaaaggtc cgaatgatga acgtccggtt tcgcatcggc ctgatcaacg
     2041 cttccctgcc cagctatttc ccccggcgac acggtgtctt tgaagcagcc gagaagatgc
     2101 tggccgatct gaccgccgat ctgggcatcg gcctggtcag tgccccggac ctgccgatgg
     2161 acgcccgcgc ggcgcagcag gcggtcgatc attgccgtgc cgaaggcgcg gga
//
LOCUS       DTVW01001013            1298 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2247328, whole
            genome shotgun sequence.
ACCESSION   DTVW01001013 DTVW01000000
VERSION     DTVW01001013.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1298)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1298)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1298
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2247328"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..892)
                     /locus_tag="EYO87_13270"
     CDS             complement(<1..892)
                     /locus_tag="EYO87_13270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011747096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HIC66942.1"
                     /translation="MRAPLISPFRRVSPASIATQPHQPGDNLRGAALMSLSMVGFGLN
                     DAVMKFVTQEMPLYQAIFLRGLAVMAAIALLAYRSGGLRLRLPRPERIPMALRVLGEL
                     GSTLLFLNALQRMAIGDLSAVMQSLPLVIMLGAALIFGESLGWRRTGAVVIGLLGVMI
                     ILRPGSGAFGIWSLVALGAMILIALRDLATRGFSRAVSSETIAFYAAVAVSAFGLVAS
                     LFQGWVMPGPSQIGLLLMGGGFLTIGYVSAVSAMRMGEISYIAPFRYVSLLVAIVAGL
                     VIFGEWPDLWTWTGSALVVGA"
BASE COUNT          258 a          460 c          396 g          184 t
ORIGIN      
        1 ccgcacccac caccagcgcc gatccggtcc aggtccacag atcgggccat tccccgaaga
       61 tcaccagccc ggcaacgatc gcgaccagaa gcgagacata gcggaacggc gcgatatagg
      121 aaatctcgcc catccgcatc gccgagacgg cactgacata gccgatggtc aggaaaccgc
      181 cgcccatcag cagcagcccg atctgtgacg gcccgggcat cacccatccc tgaaacaggc
      241 tggccaccag cccaaaggcg ctgacggcca cggcggcgta gaaggcgatg gtttcggaac
      301 tgaccgcccg gctgaaaccg cgcgtggcca gatcacgcag cgcgatcagg atcatggcgc
      361 ccagagcgac cagagaccag attccaaagg ctccgctgcc cgggcgcagg atgatcatca
      421 cccccagcag cccgatcacc accgcccccg tccgtcgcca tcccaggctt tcgccaaaga
      481 tcagcgccgc gcccagcatg atgaccagag gcagcgattg catcaccgcc gacagatcgc
      541 cgatggccat gcgctgcaag gcgttcagaa acagcagggt cgagcccagt tcgcccagga
      601 cacgcagcgc catcgggatg cgctcgggcc ggggcagcct cagcctcagg ccgccactgc
      661 gatacgccag cagcgcgatg gccgccatga ccgccagccc gcgcaggaag atcgcctgat
      721 acaggggcat ctcctgggtc acgaatttca tcaccgcgtc gttcaggccg aacccgacca
      781 tcgacaatga catcagggcg gcgccgcgca gattgtcgcc cggctgatgc ggctgtgtcg
      841 cgatcgaggc cggactgacc cggcgaaatg gtgaaatcag cggtgcacgc attgcggctg
      901 ccctcttgtc ctggggaagc gttagggttc cgaagggtca ggcacaaggg ggcgtgttct
      961 tgccccccgg cagcaagcat cgcaggacgc ggggtatcgc tgccccccgg accggcaccg
     1021 cacatggcac gggccagcac gggccttgcg ggcgggccgc aaggatccct cgggtggtcc
     1081 gttcctcgaa gacctgcgcc ctttcgatat tcgcagcaac agtgtcaaga cgcctgtccc
     1141 ggctgtgcgg ggcattgtcc ctcaaggcct tgcagaactc gtttccgcgc tgccgccgat
     1201 ccttgagcga accagaaaaa aggcccggcg cagccgccgg gccttctttc tcatgtcttc
     1261 atgcggtgac gatcactcgt cgccgccggc ctcgggca
//
LOCUS       DTVW01001014            6377 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2247466, whole
            genome shotgun sequence.
ACCESSION   DTVW01001014 DTVW01000000
VERSION     DTVW01001014.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 6377)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6377)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6377
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2247466"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1374)
                     /locus_tag="EYO87_13275"
     CDS             complement(<1..1374)
                     /locus_tag="EYO87_13275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66943.1"
                     /translation="MFSRIKPSSWTADQRSPDGSAPIRVELWTAKSLFEAGRELAATR
                     FPEFNDAPAAPIRRLTDNQDAIRTNYLDTVMAAERDELITPAAEWLIDNYHMVEENLR
                     QLRQGFGRSFLRHQRKVALSGGGQAPRSLLIAWYFVALTNSEVKADDLSDFLRGFQSV
                     STLDIAELWAVPTFLRYVLVENLRRMSDRVVTARRYRNTANAIADLVASDPDNISAIV
                     EGRGELIFRDTVAVQLLYRLREGTADAQAALAALERRWGGQPALERAVQREYAQQSAG
                     NVTVGNVISSLRRMGDIDWLTWFEGVSHVDRMLVGDSEFVRLDQATRAAYRSAVERTA
                     RRSRLSETEVARLALETAAGDSEGAADRGILREPRLDGRVEVGHLLVGEDRFRLQRLA
                     GCRRTAYEMLGILIRRLGWLSLQLPLLVLTVLLLAVMTWTIPDGLPRWQVGLLLALAL
                     VPASETAM"
     gene            complement(1483..2796)
                     /locus_tag="EYO87_13280"
     CDS             complement(1483..2796)
                     /locus_tag="EYO87_13280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005860366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HIC66944.1"
                     /translation="MENLYIIILFLFVLFTLLGSGVWVGLALMGVAWVGMELFTSRPV
                     GDVMLTTIWTASSSWTLTALPLFIWMGEILYRTRLSEDMFRGLSPWMAGLPGGLVHTN
                     IVGCAVFAAVSGSSAATLTTVGKMSIPELRSRNYPESMVIGTLAGAATLGLMIPPSLT
                     LIVYGVTINESISKLFFAGVLPGLVLALLFMAYVAIRSQTSRHWTPREDAPMSFRDRV
                     VNSRFLLPVICLILVVIGSMYLGFATATEAAAFGVLGGLTLAALQRSLTWKSFTESLL
                     GATRTSAMIALILAGAAFLSLAMGFTGLPRGLANLIAGWNLSRFELLMVLLVFYIILG
                     MFLDGISSVVLTMAVVEPMVRDAGIDMIWFGIFIVVVVEMAQITPPIGFNLFVLQGMT
                     GHEMSFISKAAFPMFLLMVLMVFVLILFPDLATWLPDNIRSAPRG"
     gene            complement(2801..3340)
                     /locus_tag="EYO87_13285"
     CDS             complement(2801..3340)
                     /locus_tag="EYO87_13285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011049344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease"
                     /protein_id="HIC66945.1"
                     /translation="MIVGKLRGVRTVCDAIYNLAGGVAALCLIGILALIVAQMAARWT
                     GGVLIGATAYAGYMMAAASFLAFAYALNHGAHIRVSIVLNAVPRKVRRWLDVWCFAIG
                     AAVMWYFVWYGWRFVYWSWKFGDVSQGQDATPLWIPQSAMLLGAVILAIALTDHLIHV
                     IATGKHRIRQNLSDQSFGE"
     gene            complement(3407..4384)
                     /locus_tag="EYO87_13290"
     CDS             complement(3407..4384)
                     /locus_tag="EYO87_13290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009825821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C4-dicarboxylate ABC transporter
                     substrate-binding protein"
                     /protein_id="HIC66946.1"
                     /translation="MTKLTTLLAATALAGVAAPGFAEVWDMPLAYSATNYHSVTAEQF
                     GNCVTTGTGGEIEIKTHPSGSLFAGNDIKRAVQTGQVPIGERLLSAHENENPLFGVDS
                     IPFLATSFDQAADLWTAAKPALTELLAKQNMTLVYSVPWPPQGLYFKNETKSIADMKG
                     VKFRSYSNATARLAELTGMLPVQIEAAEISQAFATGVADAMISSGATGYDRKVWESLN
                     YFYEVDAWLPRNYVLINSDVWAKTSEANRNVINACGALAEYAGTWRAKEYTQFTLNGL
                     REGGMTVEPASDQMKAELKDIGATMTSEWLETAGEPGQAIVDKFRAMQK"
     gene            complement(4413..5687)
                     /locus_tag="EYO87_13295"
     CDS             complement(4413..5687)
                     /locus_tag="EYO87_13295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011049346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HIC66947.1"
                     /translation="MTQGARHIIVVGAGIVGVSAAIWLRRDGHEVTLVDRAGPGEGTS
                     FGNGGVLAACAVVPVTVPGLLRKAPHMLFHPEQPLFLKWRHVPRLLPWLRRYMGHAND
                     PDVRRIARALTPILGASLSDHQELAAGTPARHRITPCDYLYAYRDRRHFEADAFGWGI
                     RAANGFAWDELEGRALRDFDPALSEDLGFAVRLPGHGRITDPGRYVKDLAAHFQSLGG
                     RVLRADVSDIVQENGRVTGLRATGEILPCDTAVFCTGAWSRPLARKLGIDVPLESERG
                     YHVDFVAPNMAPKAPVMVASGKFVATPMEGRLRVAGTVEFGGLEPPASRAPLALLRRQ
                     AVAAFPGLAAQETREWMGHRPAPADSIPIIGASPTVSGAYLGFGHHHVGLTGGPKTGR
                     LLAQLISGRRPDIDMGPYSPARFAMAGNARQD"
     gene            complement(5684..>6377)
                     /locus_tag="EYO87_13300"
     CDS             complement(5684..>6377)
                     /locus_tag="EYO87_13300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011049347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="muconate cycloisomerase"
                     /protein_id="HIC66948.1"
                     /translation="DLALVDRLAADGVGIVKLKAGVRGHRFDMMRLERIRADHPDIEI
                     RVDFNQGLGPEDAVARVRDVAKMAPGFIEQPVRADQFTLMARIRDAIDVPLLADESVF
                     GPEDMLRAVREGICDGVSVKIMKAGGLSRARQKAEMAAASGLTAYGGDMFETGLAHLA
                     GAHMIAATPAITLGCEFYQAHYYLRQDILDGPFPLRDGAVVVPDAPGLGMSPSAEILE
                     RFALRSSIGRAA"
BASE COUNT         1205 a         2111 c         2035 g         1026 t
ORIGIN      
        1 catcgcggtc tcgctggccg ggaccagcgc cagcgccagc agcaagccga cctgccaccg
       61 gggcaggccg tcggggatcg tccaggtcat caccgccaac agcaggacgg tcaggaccag
      121 caagggcagt tgcagcgaca accatccaag ccggcgtatc aagatgccca gcatttcgta
      181 ggctgtcctg cggcaccctg ccagccgctg cagccggaac cggtcctcgc cgaccagcag
      241 gtgcccgacc tcgacgcgcc cgtccagccg cggctcccgg aggatgcccc gatcggcggc
      301 accttcggaa tcgccggcag cggtctccag cgccagccgg gcgacctcgg tctcgctcag
      361 cctggatcgg cgcgccgtcc gctcgaccgc ggatcgatag gccgcgcggg ttgcctggtc
      421 caggcggacg aattcggaat ccccgaccag catcctgtcg acatggctga cgccctcgaa
      481 ccatgtcagc cagtcgatat cccccatccg gcgcaggctg ctgatgacgt tgccgacggt
      541 gacgttgccg gccgattgct gggcgtattc ccgctgcacc gcgcgttcca gcgccggctg
      601 tccgccccat cgccgttcca gcgccgccag cgccgcctgc gcgtccgcgg tgccctcgcg
      661 aaggcgatac agcaactgga ccgcgacggt atcccggaag atcaattcgc cccggccctc
      721 gacgatggcc gagatgttgt cgggatcgct tgcgaccaga tcggcgatgg cgttggcggt
      781 attgcggtac cggcgcgctg tcaccacccg gtcggacatc cggcgaagat tttcgaccag
      841 aacatagcgc agaaaggtcg ggacggccca tagctcggcg atatccagcg tcgagaccga
      901 ctggaaaccg cgaagaaagt cggacaggtc gtcggccttg acctcggaat tggtcagcgc
      961 gacgaaatac cacgcgatca gcagactgcg cggcgcctgt ccgcccccgg acagcgccac
     1021 tttccgctga tggcgcagga acgagcgtcc gaaaccctgg cgcagctggc gcaggttctc
     1081 ttcgaccatg tggtaattgt cgatcagcca ttccgccgcc ggcgtgatca gttcgtcgcg
     1141 ttctgccgcc atgacggtat caagatagtt cgtccggatc gcatcctgat tgtcggtcag
     1201 ccgccggatc ggggcggccg gcgcatcgtt gaattccgga aaccgcgtcg ccgccagttc
     1261 cctgccggct tcgaacagcg atttcgcggt ccataattcg acccggatcg gcgccgaacc
     1321 atcgggtgac cgctggtccg cggtccacga actgggcttg atccggctga acaacgacga
     1381 gtctcccttc aaggccggca acaccagagg aacggtatca caagacgcgg ccgaaacagc
     1441 gccggaatcg cggttgcgcg gcagacgggc cgcatccggc attcacccgc gtggagccga
     1501 tcggatattg tcgggcagcc aggtggcgag gtcgggaaag aggatcagga cgaagaccat
     1561 cagaaccatc agcaggaaca tcgggaacgc cgccttggaa atgaagctca tctcgtggcc
     1621 cgtcatgcct tgcagcacga acaggttgaa cccgatcggc ggcgtgatct gcgccatctc
     1681 gacgaccacg acgatgaaga tgccgaacca gatcatgtcg atcccggcat ccctgaccat
     1741 gggctcgacc acggccatgg tcagcaccac cgaggagatc ccgtccagga acatgcccag
     1801 gatgatatag aacaccagca gcaccatgag aagttcgaag cgcgacaggt tccagcccgc
     1861 gatcaggttg gccagcccgc gcggcagccc ggtaaagccc atggcaagcg acaggaacgc
     1921 ggcacccgca aggatcagcg cgatcatcgc cgatgtgcgc gtggccccca gaaggctttc
     1981 ggtaaagctt ttccacgtca gtgatcgctg aagcgcggca agggtcaggc cgccaagaac
     2041 gccgaaggcg gcggcctcgg tcgcggtggc gaaacccaga tacatcgagc cgatgaccac
     2101 caggatcaga cagatgaccg gcagcaggaa gcgtgaattc accacgcggt cgcgaaacga
     2161 catcggcgcg tcctcgcgcg gggtccagtg gcgcgaggtt tgcgaacgga tcgccacata
     2221 ggccatgaac agcagggcca gcaccagccc tggcaggaca cccgcgaaga acagcttcga
     2281 tatactttcg ttgatcgtga cgccatagac gatcagcgtc agcgagggcg ggatcatcag
     2341 gcccagcgtc gccgccccgg ccagcgtgcc gatcaccatc gattccggat aattgcggct
     2401 gcgcagttcg gggatggaca tcttgccgac ggtggtcagt gtcgcggccg atgagccgga
     2461 caccgcggcg aagaccgcgc agccgacgat gttggtatgg acaagcccgc ccggcagccc
     2521 cgccatccag ggcgagagcc cgcggaacat gtcttccgac aatcgggtcc ggtagaggat
     2581 ctctcccatc cagatgaaca gcggcagcgc ggtgagggtc caggatgacg aggccgtcca
     2641 gatcgtggtc agcatcacat cgccgaccgg ccgcgaggtg aacagctcca tgcccaccca
     2701 ggcgaccccc atgagcgcga gcccgaccca gacgccgctg cccagaagcg tgaacaggac
     2761 aaagagaaac aggatgatga tgtagaggtt ttccatcgcg ctactctccg aagctctggt
     2821 cggaaagatt ctgcctgatc cggtgcttgc cggtggcgat gacgtggatc aggtgatcgg
     2881 tcagggcgat ggccaggatg acggcaccaa gcagcatcgc gctctgggga atccagaggg
     2941 gggtggcatc ctgtccctgg ctgacatccc cgaacttcca ggaccagtag acgaagcgcc
     3001 atccatacca gacgaaatac cacatgaccg ccgcgccgat cgcaaagcac cagacgtcaa
     3061 gccatctgcg aaccttccgg ggaacggcgt tcagcacgat ggagacgcgg atatgcgcgc
     3121 cgtgattcag ggcataggca aaggccagaa agcttgccgc ggccatcatg tatccggcat
     3181 aggcggtcgc gccgatcagg acgccgccgg tccagcgggc ggccatctgg gccacgatca
     3241 aggcgagaat gccgatcagg cacaatgcgg caacgccccc cgccagattg tagattgcat
     3301 cgcaaaccgt tctgacgccg cgcaactttc ccacgatcat tcccccgtcc aggtgcaaga
     3361 ggccacggaa gcgccggacg acggcgaagg ccgtccggcg aaaggatcac ttttgcatgg
     3421 cccggaactt gtccacgatg gcctgaccgg gttcgcccgc cgtctcgagc cattccgagg
     3481 tcatggttgc cccgatgtcc ttcagttccg ccttcatctg atcgcttgcc ggctctaccg
     3541 tcatgccgcc ctcgcgcagc ccgttcagcg tgaactgggt gtattccttc gcgcgccagg
     3601 ttcccgcata ttccgccagc gcgccacagg cgttgatcac gttcctgttc gcctcggagg
     3661 tcttggccca gacgtccgag ttgatcagga cgtagttgcg cggcagccag gcgtccacct
     3721 cgtagaaata gttcaggctt tcccagacct tgcggtcgta gccggtcgcg ccggaggaaa
     3781 tcatcgcatc cgccacgccg gtggcgaagg cctgactgat ctcggcggcc tcgatctgga
     3841 ccggaagcat gcccgtcagt tcggccagcc gcgcggtcgc gttgctgtag gaccggaact
     3901 tgaccccctt catgtcggcg atcgatttcg tctcgttctt gaaatagaga ccctgcggcg
     3961 gccacggcac cgaatagacc agggtcatgt tctgcttggc cagcaactcg gtcagcgccg
     4021 gtttcgcggc tgtccacaga tcggcggcct gatcgaagga ggtggcgaga aacggaatgg
     4081 aatcgacgcc gaacagcgga ttttcattct cgtgcgccga caacaggcgc tctccgatcg
     4141 gaacctggcc ggtctggacg gcgcgcttga tgtcgttgcc cgcaaagagc gagcccgagg
     4201 gatgcgtctt gatctcgatt tcgccacccg ttccggtcgt cacgcaattg ccgaattgtt
     4261 cggccgtcac cgagtggtag ttggtcgcgg aataggccag tggcatgtcc cagacttccg
     4321 cgaaaccggg ggccgcgacg ccggcaagtg cggtcgcggc aagaagcgtg gtcagtttag
     4381 tcatgtcgat ctccctgctt ttttctatag tttcagtcct gtcgtgcgtt tccggccatc
     4441 gcgaaacgtg ccggagagta agggcccatg tcgatatcgg gccgcctgcc cgagataagc
     4501 tgggccagca gacggccggt ttttggccca ccggtcagtc cgacatggtg gtgaccaaag
     4561 ccgagatagg cgccgctgac ggtcggcgac gcgccgatga tcggaatgga atcggccggt
     4621 gccggacggt gccccatcca ttcgcgcgtt tcctgcgcgg caaggccggg aaaggccgcg
     4681 acggcctgcc gcctcagcag ggcaaggggc gcccgggacg caggcggctc cagtccgccg
     4741 aattccaccg tgcccgcgac ccgcagccgc ccctccatcg gcgtcgccac gaattttccc
     4801 gaggctacca tgaccggtgc cttcggcgcc atgttcggcg cgacgaaatc gacgtgatag
     4861 ccgcgttcgc tttccagcgg aacgtcgatg cccagcttgc gggccagcgg gcgcgaccat
     4921 gcgccggtgc agaagaccgc cgtatcgcag ggcaggattt cgcctgtggc gcgcagaccg
     4981 gtcacgcgcc cgttctcttg cacgatgtcg ctgacatcag ccctcaggac gcgcccgccg
     5041 agggattgga aatgggccgc caggtccttc acgtagcggc ccgggtcggt tatgcggccg
     5101 tgacccggca gacgcacggc aaagcccaga tcctcggaca gagccgggtc gaaatcccgc
     5161 agcgcgcggc cttccagctc gtcccaggca aagccgttcg ccgcacggat gccccagccg
     5221 aatgcgtcgg cctcgaaatg cctgcgatcc ctgtaggcat agagatagtc acatggggtg
     5281 atccggtgcc gggccggggt tcccgcggcc agttcctgat ggtccgacag gctggcgccg
     5341 aggatcggtg tcagcgcgcg ggcgatgcgg cgcacgtccg gatcgttggc atggcccata
     5401 tatcggcgaa gccagggcag aagcctgggc acatggcgcc atttcagaaa caggggttgt
     5461 tcgggatgga acagcatgtg cggggccttg cgcagcaggc ccggaacggt caccggaacg
     5521 acggcacagg ccgcaagcac gccgccattg ccgaagctgg tgccttctcc gggtccggca
     5581 cgatccacga gcgtgacctc atgcccgtcg cgacgaagcc agatcgcggc cgagacgccg
     5641 acgatgcctg cgccgacaac gatgatatga cgcgcgccct gcgtcatgcg gcgcggccga
     5701 tgctggatcg cagggcgaat cgttccagga tttcggccga aggcgacatg cccagcccgg
     5761 gcgcatccgg caccacgacg gcaccgtccc gcaggggaaa gggtccgtcg agaatgtcct
     5821 gcctcaggta gtaatgcgcc tgatagaatt cgcagcccag cgtgatggcg ggggtggcgg
     5881 cgatcatgtg cgccccggcc agatgggcca gtccggtctc gaacatgtcg ccgccatagg
     5941 ccgtcaaacc cgatgctgcc gccatctcgg ccttctgccg ggcgcgcgaa aggccgccgg
     6001 ccttcatgat cttgacggaa accccgtcgc agatgccttc gcggacggcc cgcagcatgt
     6061 cctcggggcc aaagacgctt tcatcggcca gcagcggcac gtcgatcgca tcgcggatcc
     6121 gcgccatcag ggtgaactgg tcggcgcgca ccggttgctc gatgaagccc ggcgccattt
     6181 tcgctacatc gcggacccgc gccacggcgt cttccgggcc cagcccctgg ttgaagtcca
     6241 cccggatctc gatgtcggga tgatcggcgc ggatccgctc cagccgcatc atgtcaaagc
     6301 gatgcccgcg cacgccggcc ttcagcttca cgatgcccac gccgtccgcg gccagccggt
     6361 ccacgagcgc cagatcg
//
LOCUS       DTVW01001015            1817 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2248705, whole
            genome shotgun sequence.
ACCESSION   DTVW01001015 DTVW01000000
VERSION     DTVW01001015.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1817)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1817)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1817
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2248705"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1257
                     /locus_tag="EYO87_13305"
     CDS             <1..1257
                     /locus_tag="EYO87_13305"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_353877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HIC66949.1"
                     /translation="LFNHLIARQAGGSFILRLDDTDQERSKQEYVDGIKRDLDWLGLH
                     WDREERQSLRLDRYAEAADRLRTDGRLYEVFETPVELDLKRKKQLNMGRPPVYDRTGL
                     ALSNADKDRLRAEGREGYWRFRLDLERIEWVDGILGDISIDAASVSDPVLIRADGQVL
                     YTFASSVDDVDMGVTHIVRGSDHVTNTATQIQIIKALGGTPPAFAHHSLLTGAQGEEL
                     SKRIGALSLKDLREAGVAPEALISLMARLGSGQPVRLASLDELAAEFDLSQFGASPTK
                     FDAEDLWPLTREKNQALPLEAVADRIAALGVPAEQAERFWRVASQNITVLDDLAGWWR
                     IFSEGAEPQIDPDDAEFVVEAMKLLPPPPYTETTWAEWTTRVKQATGRKGKGLFMPLR
                     KAVTGQAHGPEMAEVMPLLQVVRARG"
     gene            1569..>1817
                     /locus_tag="EYO87_13310"
     CDS             1569..>1817
                     /locus_tag="EYO87_13310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66950.1"
                     /translation="MRIGSAIAAFVMLVGTGHMASAATVIKQPSTITLVRHEYDCNYC
                     QPGQVKPVAGILNGLSTGNPATGIVTFTFDDDSMAIDMQ"
BASE COUNT          331 a          558 c          613 g          315 t
ORIGIN      
        1 ctgttcaatc atctgatcgc gcgccaggcc ggcggcagct tcatcctgcg cctcgacgat
       61 accgatcagg agcgcagcaa gcaggaatac gtggacggca tcaagcgcga tctggactgg
      121 ctgggcctgc attgggaccg cgaggaacgc cagtcgctgc ggctggaccg ctatgccgag
      181 gccgccgacc ggctgcgcac cgacggccga ttgtacgagg tgttcgaaac cccggtcgaa
      241 ctggatctga agcgcaagaa gcagctgaac atgggtcgcc cgccggtcta tgaccggacc
      301 gggctggcgc tttcgaatgc cgacaaggac aggctgcggg ccgagggccg cgaggggtat
      361 tggcggttcc ggctggatct ggaacggatc gagtgggtgg acgggattct gggcgacatc
      421 tcgatcgacg ccgcctcggt cagcgacccg gtgctgatcc gcgccgacgg gcaggtgctg
      481 tatacctttg cctcatccgt cgatgacgtg gatatgggcg tcacccatat cgtgcgcgga
      541 tccgatcacg tcaccaatac ggcgacccag atccagatca tcaaggcgct cggtggcacg
      601 ccgcccgcct tcgcccatca ttcgctgctg accggtgcgc aaggcgagga attgtccaag
      661 cgcatcggcg cgctgtcgct gaaggatctg cgcgaggccg gcgtcgcccc cgaggcgctg
      721 atttcgctga tggcgcggct gggctcgggt cagccggtgc ggctggccag cctggacgag
      781 ttggcggccg agttcgacct gtcccagttc ggcgcctcgc cgaccaagtt cgacgccgaa
      841 gacctgtggc cgctgacccg cgagaagaat caggcgctgc ccctcgaggc cgtggccgac
      901 cgcatcgccg cgcttggcgt gccggcagag caggccgaac ggttctggcg cgtggcctcg
      961 cagaacatca cggtgctgga cgatctggcc ggttggtggc gcatcttcag cgaaggcgcc
     1021 gagccgcaga tcgacccgga cgacgcggaa ttcgttgtcg aagcgatgaa actgctgccg
     1081 ccaccgccct ataccgagac gacctgggcc gaatggacca cgcgcgtcaa acaggcgacc
     1141 ggccgcaagg gaaagggcct gttcatgccg ctgcgcaagg ccgtgaccgg ccaggcccac
     1201 ggccccgaga tggccgaggt gatgcccttg ttgcaggtgg tcagggcgcg gggctgaggc
     1261 gatggtccga cagttgccgt cgcggcttcg atggcggcac ccaagatcag gcggaacggc
     1321 atgacaccct cgtccctgcc gatgacagag actggctgag cgcaatcgca tgggcgacgt
     1381 ggtcacaagg ctggctgcgg catggtctgc aagcctgctt ttttcccgcg atgcatgaag
     1441 gctcccggtc gggatcggca ggcagggcga acactcccat ggcgcgagcg cgatcactcc
     1501 gtttcgcgta gacaggatca cgcgccgctg agtatagcgt gagtgtgatg atttgattgg
     1561 agattgagat gcgtatcgga tccgcgattg ctgctttcgt gatgctggtc gggacggggc
     1621 acatggcttc tgccgccacc gtcatcaagc aaccttcgac gatcactctc gtcaggcatg
     1681 agtatgattg caattattgc caacccggcc aggtaaagcc ggtggcagga attctgaatg
     1741 gcctaagcac cgggaatcct gccaccggga tcgtcacatt cactttcgat gacgactcga
     1801 tggccatcga catgcaa
//
LOCUS       DTVW01001016            2165 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2250795, whole
            genome shotgun sequence.
ACCESSION   DTVW01001016 DTVW01000000
VERSION     DTVW01001016.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2165)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2165)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2165
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2250795"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..791)
                     /locus_tag="EYO87_13315"
     CDS             complement(<1..791)
                     /locus_tag="EYO87_13315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_004139716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HIC66951.1"
                     /translation="MAESPHGVGGLAFDASKRGLPPEAGVAIGLALIVLAFEVLGRFL
                     MNDSFLFNTRDNIDGLFNTARLQIIILQVSIIGIIALGVTQVIITGGIDLSSGSVVGA
                     TAMIAMSFAQVGQINGIENSRAVFFEQGWVDLPLIVPMIVALACGLVAGLINGLLVAY
                     TGIPPFIATLGMMVSARGVAKWWTAGQPVSFPTESYTAIGSGMMPVFIFMFLAILFHL
                     ILKYTVYGKHTYAIGSNEAAARMSGIKVARHKVLVYSIAGLLAGIA"
     gene            complement(884..1828)
                     /locus_tag="EYO87_13320"
     CDS             complement(884..1828)
                     /locus_tag="EYO87_13320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007007237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter substrate-binding protein"
                     /protein_id="HIC66952.1"
                     /translation="MKKTIIAGGLVSLLSTAAMAESIGVSMSSFDDNFLTVLRNGMME
                     YAGSLEDVDIQVEDALNDVGKQLDQINNFIASGVDAIIVNPVDTSATQAMSDAANTAG
                     VPLVYVNREPINVDSMPDNQAFVGSDERESGSLQTVAICDMLGAAGKDPAEIYILMGE
                     LSNQAAVVRTQDISDVIEGGECAVEIDVIDRQTANWQRDEAQDMMTNWLSTGQPFDAV
                     IANNDEMAIGAIQAMKASGIAMEDVVVGGIDATRDALLAMAAGELDVTVFQDAAGQGA
                     GSIDAALALARGEEVDRKVYIPFQLVTPENMSDFTTQN"
     gene            1882..>2165
                     /locus_tag="EYO87_13325"
     CDS             1882..>2165
                     /locus_tag="EYO87_13325"
                     /inference="COORDINATES: protein motif:HMM:PF03737.13"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66953.1"
                     /translation="MYPYGGAIPDADIVRIRDIDEYKDLSLPVYGRGFIQQSIRNRCA
                     CAGYQIQVELGGVPVHPGDLVMADENGVCIVPKDRMEEVLGYAQLFKSIE"
BASE COUNT          414 a          676 c          638 g          437 t
ORIGIN      
        1 gcgatgcccg ccagcagacc ggcgatggaa tagaccagaa ccttgtgtcg cgcgaccttg
       61 atgccggaca tccgcgcggc cgcctcgttc gagccgatgg cataggtgtg cttgccatag
      121 acggtgtatt tcaggatcag gtgaaacagg atcgcgagga acatgaagat gaagaccggc
      181 atcatgcccg atccgatcgc cgtgtagctt tccgtcggga aggatacggg ctggcccgcg
      241 gtccaccact tcgcgacgcc gcgggccgac accatcatgc caagcgtcgc gatgaagggc
      301 gggatacccg tataggcgac aagcaggccg ttgatcagcc ccgcgaccag accgcaggcc
      361 agcgccacga tcatgggcac gatcagcggc aggtcgaccc agccctgctc gaaaaagacc
      421 gcgcggctat tctcgatgcc gttgatctgg ccgacctggg caaagctcat ggcgatcatt
      481 gccgttgcac cgacgacaga gcctgacgac aggtcgatcc cgccggtgat gatcacctgc
      541 gtcacgccga gcgcgatgat tccgatgatc gagacctgaa ggatgatgat ctgcaaccgc
      601 gcggtgttga acagaccgtc gatgttgtcc cgcgtgttga acagaaagct gtcattcatc
      661 aggaaccggc ccagcacttc gaacgcgagg acgatcaatg ccaggccgat ggcgacgccg
      721 gcctcgggcg gcagaccgcg tttcgatgcg tcaaaggcaa gtccgccgac cccatgtggt
      781 gattccgcca tctcgggttc tcctccttgc ccggcctcac tggccggagg tcgggagacg
      841 gcgcggaatt gcgccgcctc ggggcctttc gagcgtgaaa cgctcagttc tgggtggtga
      901 agtcggacat gttctcgggc gtcacgagct ggaacgggat gtagaccttg cgatcgactt
      961 cctcgccacg cgccagcgcc agcgcggcat cgatcgaacc cgcgccctgc ccggcggcgt
     1021 cctgaaacac ggtcacgtca agttcgcccg ccgccatcgc aaggagcgca tcgcgagtcg
     1081 cgtcgatgcc acccacgacc acatcctcca tcgcgatgcc cgaagccttc atcgcctgga
     1141 tcgcgccgat ggccatttcg tcgttgttgg cgatgacggc gtcgaatggc tggccggttg
     1201 acagccagtt cgtcatcatg tcctgcgcct cgtcgcgctg ccagttcgcc gtctgcctgt
     1261 cgatgacgtc tatctcgacc gcgcattcgc cgccttcgat cacgtcgctg atgtcctgcg
     1321 tccgaaccac ggcggcctgg ttcgacaatt cgcccatgag gatatagatc tcggccggat
     1381 ccttgccggc ggcgcccagc atatcgcaga tcgcgaccgt ttgcagcgac cccgattcgc
     1441 gctcgtccga gccgacgaag gcctggttgt ccggcatcga atcgacattg atcggttccc
     1501 ggttgacata gacaagcggc acacccgccg tattggcggc gtccgacatg gcctgcgtgg
     1561 ccgaggtatc gaccggattc acgatgatcg cgtcgacgcc cgaggcgatg aaattgttga
     1621 tctggtcaag ctgcttgccg acatcgttca gcgcgtcctc gacctgtata tcgacatcct
     1681 cgaggctgcc ggcgtattcc atcatgccgt ttctgagcac ggtcaggaaa ttgtcgtcga
     1741 acgatgacat cgataccccg atcgattcgg ccatcgccgc cgtcgaaagg agcgacacca
     1801 gcccccctgc aatgatcgtt ttcttcatct ttcctcctcc attggtgtcc ggctcacctt
     1861 gatcttcgaa ccttccggcc cgtgtaccca tacggaggcg ccatcccgga tgccgatatt
     1921 gttcgcatcc gtgacattga tgaatacaag gatctcagtc taccggttta tggccgtggc
     1981 tttatacagc agtcaattcg caaccgctgt gcctgtgccg gttaccagat tcaggtggaa
     2041 ctcggtggtg tgcctgtgca cccaggggat ttggtcatgg ctgacgagaa tggagtttgt
     2101 attgttccca aggatagaat ggaagaagtt cttggctatg cccagctatt caaatcgatc
     2161 gaaga
//
LOCUS       DTVW01001017            3581 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2250975, whole
            genome shotgun sequence.
ACCESSION   DTVW01001017 DTVW01000000
VERSION     DTVW01001017.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3581)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3581)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3581
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2250975"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..273)
                     /locus_tag="EYO87_13330"
     CDS             complement(<1..273)
                     /locus_tag="EYO87_13330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011314552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XRE family transcriptional regulator"
                     /protein_id="HIC66954.1"
                     /translation="MTSGREKFGAFIRREREAREIGLREMAKKIGVSPTYMSKVERDE
                     FTPPTEDKVRSIAQILECDPDELLAMAGRVPSDLADIIKRHPVEMSA"
     gene            complement(727..1599)
                     /locus_tag="EYO87_13335"
     CDS             complement(727..1599)
                     /locus_tag="EYO87_13335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009815319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HIC66955.1"
                     /translation="MNDLPPMNALRAFEAAGRHLNFRAAAGELGVTQGAVAQQVRGLE
                     GHVGMALFARLPKGLAFTAAGRGYHARVAEAFAILREASAVLRPQAARVLISVTPTFA
                     AKWLIPHLPDFTAKHPDIDLRILATEKLSSFHADGIDLAVRLGAPPFGAALRAHLLFR
                     QNIVAVASPGLLAGHSGPLDRAALAVIPKLHDAHDLWPGFLRLCGVAHSQGRDIRLSQ
                     TTLAIDAALAGQGAALASRFLVAADLKAGRLVQVVAQELSGQGDFFLLARRGTNRSDA
                     VETTCRWLIEASEP"
     gene            1697..2401
                     /locus_tag="EYO87_13340"
     CDS             1697..2401
                     /locus_tag="EYO87_13340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014875939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HIC66956.1"
                     /translation="MTVEKVALVTAGGSGMGADAARRLVKDGFRVGILSSSGKGEALA
                     EELGGVGVTGSNRSVADVTALVGNVMDRWGRIDVLVNSAGHGPKGPVLEISDDGWHEG
                     MEVYLLNAIRPARLVTPIMQKQGGGAIINISTFAAFEPDPLFPTSGVFRAGLAAFAKL
                     FADRYAADNIRMNNVLPGFIDSLPETEDRRVRIPMGRYGRAAEVSSLISWLASDEGSY
                     MTGQNLRLDGGLTRAV"
     gene            complement(2457..2957)
                     /locus_tag="EYO87_13345"
     CDS             complement(2457..2957)
                     /locus_tag="EYO87_13345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007067038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease"
                     /protein_id="HIC66957.1"
                     /translation="MRAVDRAMGWLTWILQAGGALVLVFMMITIGYDALTRHFFARAT
                     SWSMEINSFLMVYLALVTAADTLRRGEQIGIGFLAERGNPALQHLLRVVIAVVGAGFS
                     FTIAWRGWLMARDAFAYGERVSSAFGTPMWIPYGLMPVGFAVLGLQFVLMVFARRKDI
                     VRSDYG"
     gene            complement(2963..>3581)
                     /locus_tag="EYO87_13350"
     CDS             complement(2963..>3581)
                     /locus_tag="EYO87_13350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009210398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="C4-dicarboxylate ABC transporter
                     substrate-binding protein"
                     /protein_id="HIC66958.1"
                     /translation="LEKQGLRCLSLGGGIMEPEYIWSIESAPITNLSQIDGKKIRLVS
                     FEASAALEHFGAAPVRIPSSELYLALERGTVDAAVANISTINGRSIQEQVDYAYRMPV
                     TGFAIGVFTTTRRWDAMPENVRAAFMEGVEWFDQESARAANEDYFRDQYWPAFKEAGI
                     EVIEPADDEIAEFDKINVDVRQVWLDEVGPDVGQRAIALALGEEA"
BASE COUNT          661 a         1160 c         1116 g          644 t
ORIGIN      
        1 cgcagacatt tcgacaggat gccgcttgat gatgtcggcg agatcggatg gcacgcgccc
       61 cgccatcgcc agcaattcgt ccggatcgca ttcgagaatc tgcgcgatcg accgaacctt
      121 gtcctcagtc ggcggcgtga actcgtcgcg ctccaccttc gacatatacg tcgggctcac
      181 cccgatcttc ttggccatct cgcgcaagcc gatctcccgc gcctcacgct cgcggcgaat
      241 aaacgccccg aacttctccc tcccgctggt catggctcct atctccgttt cctgtctagc
      301 gttcactcta cacttgattc gataggttcg tcaaccatcc actaaacggt ggccgaaatg
      361 ccttcaggca gcaatctgaa gttctcggat atcttcaagc aagcgcctga aatctggctc
      421 aggcgcaacg cacatggttc gaaacgtgtt caggaacggc agccatttcc cgatgtcccg
      481 cgcgcaaagg atccgtgatg ccttggcgga caacgcggat gcgccggctt ttccacttgt
      541 gcaagtctga tcagatgccg cggcggtggc ttgacggccg gaatatcggc gctgcggaca
      601 tggatcggct tgatcggggc gcatgtgcaa tcagacggtc ggcatcggga tcgatacacc
      661 gttcgagatc aagctcttgt ccagataatt tacaccgctt tcaagaaacc gtctcgcccg
      721 cgcaggtcat ggttccgacg cctcgatcag ccatcgacag gtggtctcga cggcgtccga
      781 ccggttcgtt ccgcggcgcg caaggaggaa gaaatccccc tgcccgctga gttcttgcgc
      841 aacgacctgc accagccgcc cggccttcag atcggccgcg acaagaaacc ggctggccag
      901 ggccgcgccc tgtcccgcca gcgccgcgtc tatggccaga gttgtctggc tgaggcgaat
      961 gtcgcgcccc tggctgtgcg caacgccaca cagccgcaga aagccgggcc agagatcatg
     1021 cgcgtcatgc agcttgggta tcacggcaag cgccgcccgg tccagcgggc cggaatgccc
     1081 ggcaagcagg cccggtgagg cgaccgcgac gatgttctgc cgaaacagca gatgcgcccg
     1141 gagcgcggcg ccgaagggag gggcgccgag acggaccgcc aagtcgatac cgtcggcgtg
     1201 gaaactggac agcttttctg tcgcgaggat ccgcagatcg atgtcgggat gtttcgcggt
     1261 gaagtccggc aggtgcggga taagccattt cgcggcgaat gtgggtgtga cgctgatcag
     1321 cacccgcgct gcctgaggcc gaagcaccgc ggatgcctcg cgcaggatgg cgaaagcttc
     1381 ggcgacccgg gcgtgatagc cgcgtccggc cgccgtgaag gccagtccct tgggcagacg
     1441 cgcgaacaat gccatgccga catggccctc aagccctcgg acctgttgcg cgacggcgcc
     1501 ctgggtcacg cccagttcgc ctgccgcggc acggaagttc aggtgccgtc cggcggcctc
     1561 gaaggcgcgc agcgcgttca tgggaggaag atcgttcatc tggcagtcgt atttctactg
     1621 tcaggcggcg tcaattctgg ttcgcttctg cggccgatcc gggctattca ggatcgcaag
     1681 caccaaggag gctgtcatga cagtagaaaa ggtcgcgctg gttacggccg gtggaagcgg
     1741 gatgggcgcg gatgctgcgc ggcggctggt caaagacggg tttcgggtcg gcattctctc
     1801 gtcctccgga aagggcgagg cgctggccga ggagctcggc ggtgtcggcg tgaccggttc
     1861 gaaccgatcg gttgccgatg tgaccgcgct ggtcggcaat gtgatggacc gctggggacg
     1921 gatcgacgtc ctggtcaatt ccgccggtca cggtccgaag ggtcccgtgc tcgagatctc
     1981 agacgacggc tggcacgagg ggatggaggt ctacctgctg aacgcgatcc gccccgcccg
     2041 gctggtgacg ccgatcatgc aaaagcaggg cggcggcgcg atcatcaaca tctcgacctt
     2101 cgcagccttc gaacccgatc cgctatttcc cacctcgggc gtgtttcgcg cgggcctcgc
     2161 tgcctttgcc aagctctttg ccgaccgata cgcggccgac aacatccgca tgaacaacgt
     2221 cctgcccggc tttatcgaca gcctgcccga aaccgaggac cggcgcgtgc gcattcccat
     2281 gggccgctat ggccgggccg ccgaagtctc gtcgctgatc tcctggctcg cctccgacga
     2341 gggcagctac atgaccggcc agaacctgcg cctcgatggc ggtctgaccc gcgctgtctg
     2401 aggctgcgtc ctctcggcca ttcttctcgg cgcaaccgtc cgatggggaa caaggcttaa
     2461 ccgtaatcgg atcgcacaat gtccttgcgg cgcgcgaaga ccatcagcac gaattgcagg
     2521 cccagcacgg caaagccgac cggcatcaac ccatagggta tccacatggg cgtgccgaac
     2581 gcgctgctga cgcgctcgcc ataggcgaag gcgtcgcgcg ccatcagcca gcctcgccag
     2641 gcgatcgtga acgagaaacc cgcgcccacg accgcgatca cgacccgcag aaggtgctgc
     2701 aacgccggat tgccgcgttc ggccagaaag ccgatgccga tctgttcgcc tcgtcgaagc
     2761 gtgtcggctg cggtgaccag cgccagatac accatgagaa acgagttgat ctccatgctc
     2821 caactggtgg cgcgggcaaa gaagtgccgc gtcagcgcgt catagccgat ggtgatcatc
     2881 atgaagacca gcaccagcgc gccgccggcc tgcaagatcc aggtcagcca acccatcgca
     2941 cggtcgacgg cgcgcatcgg cgttatgctt cttcgccaag ggccagcgcg atggcacgct
     3001 gacccacgtc aggaccgacc tcgtcaagcc agacctgacg cacgtcgacg ttgatcttgt
     3061 cgaattcggc gatctcgtcg tcggccggct cgatgacttc gatcccggcc tccttgaagg
     3121 cgggccagta ttgatcgcgg aaataatcct cgttcgctgc gcgggcgctt tcctgatcga
     3181 accattcgac cccctccatg aaggcggcgc ggacattctc gggcatcgcg tcccagcggc
     3241 gcgtggtcgt gaagacgccg atcgcaaagc ctgtcaccgg catccgatag gcataatcca
     3301 cctgttcctg gatcgagcgt ccgttgatgg tcgagatgtt ggccacggcc gcatcgaccg
     3361 tcccgcgttc cagcgcgaga tacagttcgg acgagggaat gcgcaccggg gcggcgccga
     3421 aatgttccaa cgcagccgag gcctcgaagg acacgagccg gatcttcttg ccgtcgatct
     3481 gggagaggtt ggtgatgggc gcgctttcga tgctccagat atattccggt tccatgattc
     3541 caccgccaag cgacaggcag cgcagcccct gtttttccag c
//
LOCUS       DTVW01001018            1111 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2251394, whole
            genome shotgun sequence.
ACCESSION   DTVW01001018 DTVW01000000
VERSION     DTVW01001018.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1111)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1111)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1111
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2251394"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            18..977
                     /gene="speB"
                     /locus_tag="EYO87_13355"
     CDS             18..977
                     /gene="speB"
                     /locus_tag="EYO87_13355"
                     /EC_number="3.5.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005794720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="agmatinase"
                     /protein_id="HIC66959.1"
                     /translation="MALEDAKTQVDQAFTRDDARGLSYENAFGGATSFLRRRYAKDLA
                     GVDLAVTGIPFDQAVTNRPGTRFGPRAIREASTLQPYDPPYGWGYDPLSLLSVVDYGD
                     MAFDYANIREVPARIEAHVGKILDAGAAPVTLGGDHFITLPILRAVAARRGPVALIQF
                     DAHSDTWVDDDPDRIDHGTFLYKAIREGVVDPASSVSIGIRTENPDTLGVTILDAPGV
                     HRDGIDATQIRIREAVADRPVYVTFDIDALDPAFAPGTGTPVWGGLASWQAAALLRGL
                     AGVDLIGGDVVEVSPPYDTTGATAVAGAHVAMELIALYGWTRR"
BASE COUNT          172 a          369 c          379 g          191 t
ORIGIN      
        1 cagacaggag gcggcggatg gcgctggaag atgcgaagac ccaggtcgat caggcgttca
       61 cgcgcgacga tgcgcgcggc ctgtcctacg agaatgcctt tggcggcgcg accagtttcc
      121 tgcgtcgccg ctatgccaag gatctggcgg gcgtcgatct tgccgtgacc ggcatcccct
      181 tcgatcaggc ggtgacgaat cgtcccggca cccgttttgg cccgcgcgcg atccgcgagg
      241 catcgaccct gcaaccctat gatccgccct atggctgggg ctatgatccg ctgagcctgc
      301 tgagcgtcgt ggattacggt gacatggcct tcgattacgc caatatccgc gaggtgccgg
      361 cccggatcga ggcgcatgtg ggcaagatcc tggatgccgg ggccgcgccc gtgacgctgg
      421 gcggcgatca cttcatcacc ctgccgatcc tgcgcgcggt cgcggcccgg cgcgggccag
      481 tggcgctgat ccagttcgac gcccattccg acacctgggt cgatgacgat ccggaccgga
      541 tcgaccacgg cacctttctc tacaaggcaa tccgcgaagg cgtggtcgat cccgcgtcca
      601 gcgtcagcat cggcatccgc acggaaaatc ccgacacgct gggcgtgacc atcctggatg
      661 cgcccggagt ccatcgcgac ggcatcgacg ccacgcagat ccgcatccgc gaggcggtag
      721 cagatcgtcc ggtctatgtc accttcgaca tcgatgcgct ggacccggcc ttcgcgccgg
      781 gcacgggaac cccggtctgg ggcgggctgg ccagttggca ggcggcggcg ctgctgcgcg
      841 gcctggcggg tgtggacctg atcggcggcg acgtggtcga agtctcaccc ccctatgaca
      901 cgaccggcgc gacggcggtg gccggcgccc atgtcgcgat ggagttgatc gcgctttacg
      961 gctggacccg gcgctgattg cgtcccgcga tggccggcgg ccagcccacg gacctgcgga
     1021 tatttgagga ccgagacatg acgggtcgct tgccgatacc gtctggcttg ggtaagcggt
     1081 tcggatgctt cccgaagacc gccttgtcca g
//
LOCUS       DTVW01001019            1139 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2252081, whole
            genome shotgun sequence.
ACCESSION   DTVW01001019 DTVW01000000
VERSION     DTVW01001019.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1139)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1139)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1139
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2252081"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..800)
                     /locus_tag="EYO87_13360"
     CDS             complement(<1..800)
                     /locus_tag="EYO87_13360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010044681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HIC66960.1"
                     /translation="MTLTDRLTAELDQIRKDGLFKDERVITSMQSGRIEVGAGRTVLN
                     FCANNYLGLADHPELIAAGHAALDRYGYGMASVRFICGTQEEHKALESRIAAFLGAED
                     AILYSSCFDANTGLFETILGPEDAIISDALNHASIIDGVRLCKARRLRYANNDMAGLE
                     ARLIEAGDARNRVIVTDGVFSMDGVIADLPAICDLAERHDATVVVDDSHAVGLTGPGG
                     RGTPALHGVADRVAILTGTLGKALGGASGGYVAGPAPVIQMLRQRSRP"
     regulatory      1009..>1139
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00174"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="cobalamin riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="adenosylcobalamin"
                     /db_xref="RFAM:RF00174"
BASE COUNT          201 a          376 c          369 g          193 t
ORIGIN      
        1 tagggccgag agcgttgccg caacatctgg atcaccggcg caggccccgc gacatagccg
       61 cccgaagcgc cgccaagcgc cttgcccagc gtgccggtca ggatcgccac ccggtccgcg
      121 accccgtgca gcgccggcgt gccgcgcccg ccgggcccgg tcagcccgac cgcatggctg
      181 tcatcgacca cgaccgttgc gtcatggcgt tcggccagat cgcagatcgc gggcagatcg
      241 gcgatcacgc catccatcga aaacacgccg tcggtgacga tcacccggtt gcgggcatcg
      301 ccggcctcga tcagccgcgc ttccagtccg gccatgtcgt tgttggcata gcgcagccgg
      361 cgcgccttgc acagccggac cccgtcgatg atcgaggcat ggttcagcgc gtccgagatg
      421 atcgcgtcct cgggcccgag gatcgtctcg aacaggccgg tattggcgtc gaaacacgag
      481 gaatagagga tcgcgtcctc ggcccccaga aaagccgcga tgcgcgattc cagtgccttg
      541 tgttcctctt gcgtgccaca gatgaagcgg accgaggcca tgccgtagcc atagcggtcc
      601 agcgccgcat ggccggcggc gatcaactcg ggatggtcgg ccaggcccag gtaattgttg
      661 gcgcagaaat tcagcacggt gcggccggcc ccgacctcga tccggcccga ctgcatcgag
      721 gtgatgacgc gctcgtcctt gaaaagcccg tccttgcgga tctggtccag ttcggcggtc
      781 agacgatcgg tcagggtcat gtcgcgcttc cttcggccaa ggcgccgttc tgcgcccggt
      841 gatccgggca ttgtcgtgcg gatgcctagc gcgaaaagtc gagatttgcc atataggccg
      901 gaattgccga aagcccggcg acgccgcggc ctgatcgctg ccccggaggt caggaattta
      961 ttttccatcg gatccacaca agatattgac gccccggccc cggacatggc taagtgatgt
     1021 ggctatggtg tccctgactc gcgtcagggg tgaaaaggga agccggtgaa agtcctgcgc
     1081 tgcccccgca actgtaagcg gcctgcacgg ctgatgatgc cactggagcg atccgggaa
//
LOCUS       DTVW01001020            2491 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2253706, whole
            genome shotgun sequence.
ACCESSION   DTVW01001020 DTVW01000000
VERSION     DTVW01001020.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2491)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2491)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2491
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2253706"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(290..1132)
                     /locus_tag="EYO87_13365"
     CDS             complement(290..1132)
                     /locus_tag="EYO87_13365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HIC66961.1"
                     /translation="MLRLVSLASAIALGLAACAPTTQTTSASLLAGPPVPAVYQARTD
                     TGPQGEPVNIPAVRAAYLTERNQRQQVAYNGPEDPGTIIVDPYARVLYYVTAPGVAMR
                     YGVAVGRAGKGYSGTATIRRKQEWPDWRPTDNMIRTEPELYSQFAGGLSGGLDNPLGS
                     RALYLYEGGRDTYYRIHGTMDPSSIGKATSAGCIRMFNQDVMDLFNQVELGTKVKVRS
                     QAESLRIEGPMRETPEGYVQPEGGGMAAADAGVPGATAGGAPTTTVITASGVAPVDSM
                     GFAY"
     gene            1435..1686
                     /locus_tag="EYO87_13370"
     CDS             1435..1686
                     /locus_tag="EYO87_13370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014761069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GlsB/YeaQ/YmgE family stress response membrane
                     protein"
                     /protein_id="HIC66962.1"
                     /translation="MGLIVALIVGAIAGWLAGLMVKGHGQGVLMNIVVGIVGAVIAAF
                     LFPAMGLAIGAEGSIIGSIIYATIGAVILLLIIRLVNRA"
     gene            1970..>2491
                     /locus_tag="EYO87_13375"
     CDS             1970..>2491
                     /locus_tag="EYO87_13375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HIC66963.1"
                     /translation="MLWSATLVSNFGGLVQAVGAAWLMTQLTDSATLIALVQASNTMP
                     IMLLAIASGALADIFDRKTLLVAAQCLMAGVSVILAIVAWQGWLTPWMLLAFTFLIGA
                     GQALYNPPWQASMGDLVPRADLPSAVTLNSVGFNMMRSVGPAAGGIIVAAFGAAAAFA
                     VNALSYVPLLAALS"
BASE COUNT          371 a          827 c          830 g          463 t
ORIGIN      
        1 ctcggtgacc gggccgctgg ccccggtcat ctcggcctcg atctcggcta tcgcgcggta
       61 cagcgccgca tccttcagcg cgccgatcgc cggggcgcgg ctggccgcga ccagcgcgac
      121 ctgacccggc gtcaggattt ccttttccag cttggtgtaa ttcggcatcg caatcccctg
      181 gatccggcgc aatccgcttc ggagggtgcg aaaattcgcg tccctttgca acggcaaaga
      241 ccccggcgcg gtgccggggc cttgcaagac gtcgcgtcgc gcggccgcct cagtatgcga
      301 agcccatgct gtcgaccggc gcaacgccgc tggcggtgat gacggtggtc gtcggcgccc
      361 cgcccgccgt ggcgccggga acgccggcat cggccgccgc catgccacca ccctcgggct
      421 ggacgtaacc ctcgggcgtt tcgcgcatcg ggccttcgat gcgcaggctc tcggcctggc
      481 tgcgcacctt caccttggtg ccaagttcga cctggttgaa cagatccatg acatcctggt
      541 tgaacatgcg gatgcagccg gccgaggtgg ccttgccgat cgaggacgga tccatcgtgc
      601 cgtggatccg gtaataggtg tcgcggccgc cctcgtagag atacagcgcg cgcgatccca
      661 gcgggttgtc cagcccgccc gacaatccgc cggcgaactg gctgtaaagc tcgggttcgg
      721 tgcggatcat gttgtcggtc gggcgccagt cgggccattc ctgcttgcgc cggatcgtcg
      781 ccgtgccgct atagcccttg ccggcgcggc cgaccgcgac gccatagcgc atcgccacgc
      841 cgggcgcggt gacataatag agaacccgcg catagggatc gacgatgatc gtgccggggt
      901 cttccggacc gttataggcg acctgctgac gctggttgcg ttcggtcaga taggcggcgc
      961 gaacggccgg gatattgacc ggctcgccct gcggcccggt atcggtgcgg gcctgataga
     1021 ccgccggaac cggcggaccg gccagcagcg aggcggatgt cgtctgggtc gtgggcgcgc
     1081 aggcggcaag cccaagggca atcgccgaag caagggaaac gaggcgcagc atgcgttcaa
     1141 tccttcattt gtcgcggacc atcgccggca gaggcgcggc cgcaggcagc aagagttcgt
     1201 tccggatgtc accgccggcg gcagaaccgg ccgtgattcc tgcatgaggt catcagcccg
     1261 ccccatgcga acagcgtcaa cccatgcaca ttccgatcaa gccgattcgg ccggtcttgt
     1321 tgccaatggg cgtcatctcg atcaagtttt tacgaaaagg gaacaaatca gcgtgcgttt
     1381 ggtttcacgc aagtgcgaga atatgaacgc gaactttcag aaaggcagag tccaatgggt
     1441 cttatcgttg cattgatcgt cggggccatc gccgggtggc tggccggtct catggtgaag
     1501 gggcacggcc agggcgtgct gatgaacatt gtggtgggca ttgtcggcgc ggtcatcgcg
     1561 gccttcctgt ttcctgcgat ggggctggcc atcggtgccg aaggctcgat catcggctcg
     1621 atcatctacg ccaccatcgg cgcggtcatt ctgttgctga tcatccggct ggtgaaccgg
     1681 gcctgacccc gcggggcggc aacctcaccg atgtctcgat tcccccggcc cctcttggcg
     1741 ccgggggctt tcgcttgggg ccacgtcctt ccgtctccga tttcccgagc ccggcgcaga
     1801 tcggcgaaag gccggatcgc gtcgcagcct gcgatccgct tcggaccgca ttgccgttcc
     1861 gggccggtct gactaggctg cgggcaaacc cgatacaggc aaagtcttgt ccgagcccac
     1921 cgcgccccgc ccctcggccc tcgcgccgtt ccgccatcgc gacttccgca tgctctggag
     1981 cgcgaccctg gtgtccaatt tcggcgggct ggtccaggcg gtcggcgcgg cctggctgat
     2041 gacgcaactg accgacagcg cgacgctgat cgcactggtc caggcctcca acacgatgcc
     2101 gatcatgctg cttgccatcg cctcgggcgc gctggccgac atcttcgacc gcaagacgct
     2161 gctggtcgcg gcgcaatgcc tgatggcggg cgtgtcggtg atcctggcca tcgttgcctg
     2221 gcagggctgg ctgacgccgt ggatgctgtt ggcctttacc ttcctgatcg gggcggggca
     2281 ggctctttac aatccgccct ggcaggccag catgggcgat ctggtgccgc gcgccgacct
     2341 gccctcggcg gtgacgctga attcggtcgg cttcaacatg atgcgcagcg tcggcccggc
     2401 cgcgggcggg atcatcgtgg ccgccttcgg tgccgccgcc gcctttgccg tcaatgcgct
     2461 gagctatgtt ccgctgctgg cggcgctgag c
//
LOCUS       DTVW01001021            1116 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2253967, whole
            genome shotgun sequence.
ACCESSION   DTVW01001021 DTVW01000000
VERSION     DTVW01001021.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1116)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1116)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1116
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2253967"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(4..>1116)
                     /locus_tag="EYO87_13380"
     CDS             complement(4..>1116)
                     /locus_tag="EYO87_13380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002721146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TldD/PmbA family protein"
                     /protein_id="HIC66964.1"
                     /translation="YIGDDNDSGGISLLVDDHLGLAAPGQLTDRRDASGLELSDDSAD
                     PAPDHLQDLALRAEAAALALPGIAQVESANASFMRRQLWLAASNGFSGGYGRTGHVIS
                     AVAITGEGLGMERDYAAESRAFPADLPEPEEIGRLAAERTLARAGSRKPPTGAFPILY
                     DRRVSASLIGHLLGAVNGSAIARGASWLLRALDQPVLPAGFDLTEDPLRPRYPSSRPF
                     DVEGLATRRRRIVADGVLQGWTLDLATGRKLGLDSTGSAARGLASAPSPTTANVILTP
                     GAKTRDQMIAEMGRGLVVTSMLGASINGTTGDYSRGAAGFWVENGQIAYPVNECTIAG
                     NLRDMLMRIEAANDALPWRGAEVPSLRVEGMTVAGA"
BASE COUNT          174 a          414 c          370 g          158 t
ORIGIN      
        1 gcctcaggcc ccggcaacgg tcattccctc gacgcgcaga ctgggcacct cggccccgcg
       61 ccagggcagc gcgtcgttgg ccgcctcgat gcgcatcagc atgtcacgca gattgccggc
      121 gatggtgcat tcgttgaccg gataggcgat ctggccgttc tcgacccaga aacccgcggc
      181 gccgcgcgaa taatcgcccg tcgtgccatt gatcgaggcc cccagcatcg aggtcacgac
      241 cagcccccgc cccatctcgg cgatcatctg gtcccgggtc ttcgcgcccg gtgtcaggat
      301 cacgttcgcc gtcgtgggcg agggcgccga ggccagcccg cgcgccgccg atccggtgct
      361 gtccagcccc agcttgcgcc ccgtcgccag atccagcgtc cagccttgca gcacgccatc
      421 ggcgacgatc ctgcgccggc gcgtcgccag cccctcgaca tcgaagggcc gcgacgaggg
      481 atagcgcggg cgcagcggat cctcggtcag gtcgaagccc gccggcagga ccggctgatc
      541 cagcgcgcgc agcagccagc tggccccccg cgcgatggcg ctgccattga ccgcgcccag
      601 cagatgcccg atcagcgagg ccgagacgcg gcggtcatag aggatcggaa acgccccggt
      661 gggcggcttg cgcgacccgg cgcgggccag cgtgcgttcg gccgccagtc gcccgatctc
      721 ttccggctcg ggcaggtcgg cggggaaggc gcgggattcg gcggcgtaat cgcgttccat
      781 gcccagcccc tcgccggtga tcgccaccgc cgaaatcacg tggccggtcc gtccgtagcc
      841 gccggaaaac ccgttcgagg ccgccagcca aagctgacgc cgcatgaagg atgcattggc
      901 ggattcgacc tgtgcgatgc ccggcaaggc cagcgccgcc gcctcggccc gcagcgccag
      961 atcctgaagg tggtcggggg cgggatcggc gctgtcatcg gacaattcca gccccgaggc
     1021 gtcgcgccga tcggtcagtt gcccgggcgc ggccagcccc agatgatcat cgaccaacaa
     1081 gctaattccc ccggagtcat tatcatctcc aatgta
//
LOCUS       DTVW01001022            1156 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2254825, whole
            genome shotgun sequence.
ACCESSION   DTVW01001022 DTVW01000000
VERSION     DTVW01001022.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1156)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1156)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1156
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2254825"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1156)
                     /locus_tag="EYO87_13385"
     CDS             complement(<1..>1156)
                     /locus_tag="EYO87_13385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006938001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase family protein"
                     /protein_id="HIC66965.1"
                     /translation="GLLKVGPHSAGSDPGPACYGLGGTQPTVTDANLVLGYYDPGFFL
                     GGRMQLDLDAARTAIARVAEPLGLSVEDAALGIHKVVVESMASAARVHLVERGKDPRD
                     YAMVGFGGAGPAHAVDVARVMGISSVLIPPASGAASALGFLVAPLSFEDVRSMRVELS
                     EGFDADGVNAVLQALEDEGLRHLERAGVSRSDAVIERSADMRLVGQMHDISVPLPDHA
                     LGEDDLPTIREAFRRAYATRYAEPFEGARFEAVNFRVRVAGPTSDLELTGAADGGDAD
                     SKVKGTRHCWFDEGDFETKVYDRYALRAGDRIDGPAIIEERESTTIIGPSDRIEIDAG
                     LNLCVTLGAGRAAEAIVTPEMSRAEAVARIEGDPIGLEIMWSRMVNVVEEM"
BASE COUNT          219 a          421 c          333 g          183 t
ORIGIN      
        1 catctcctcg accacgttga ccatgcgcga ccacatgatt tcgagcccga tcggatcacc
       61 ctcgatccgc gcaacggctt cggcgcgcga catctcgggc gtcacgatgg cctctgccgc
      121 ccgaccggca cccagcgtca cgcaaaggtt caggcccgcg tcgatctcga tccggtcgga
      181 cgggccgatg atcgttgtgg actcgcgctc ttcgatgatc gcgggtccgt caatccggtc
      241 acccgcacgg agcgcgtaac ggtcgtaaac cttggtttcg aaatcgcctt cgtcgaacca
      301 gcaatgccgc gtgcccttga ccttgctgtc agcatcgccg ccatcggcag cacccgtcag
      361 ttccagatcc gaggtcggac cagccacccg aacgcggaag ttcaccgctt cgaaccgcgc
      421 gccttcgaac ggttcggcat agcgcgtggc ataggcacgg cggaacgcct cgcgaattgt
      481 cggcagatcg tcttccccca gcgcgtgatc gggcagcggg accgagatgt cgtgcatctg
      541 ccccaccagc cgcatgtcgg cgctgcgttc gatcaccgca tcggaccggg acactccggc
      601 gcgctccaga tggcgcagcc cttcgtcctc cagcgcttgc agcaccgcat tgacaccatc
      661 ggcatcgaag ccttcggaca gttcaacccg catcgaccgc acgtcctcga acgaaagcgg
      721 tgccacaagg aatccaagcg cagacgccgc cccggaggcg ggtgggatca ggacagagga
      781 gatgcccatc acccgcgcca catcgaccgc gtgggcggga ccggccccgc cgaagccgac
      841 catggcataa tcgcgcggat ccttgccgcg ttcgaccaga tgtacccgcg ccgccgaagc
      901 catgctttcc acgaccacct tgtgaatacc cagcgcagca tcctcgaccg acaggcccag
      961 aggctcggcc acgcgtgcga tggcggtgcg tgccgcatcc agatcaagct gcatccgccc
     1021 gcccaagaaa aatcccggat cgtaatagcc cagcaccaga ttggcatcgg tcacggttgg
     1081 ttgtgtacct cccaggccat agcaggcagg ccccggatcg gaccctgccg aatgcggccc
     1141 gaccttcagc agccca
//
LOCUS       DTVW01001023            2740 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2256041, whole
            genome shotgun sequence.
ACCESSION   DTVW01001023 DTVW01000000
VERSION     DTVW01001023.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2740)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2740)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2740
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2256041"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..125
                     /locus_tag="EYO87_13390"
     CDS             <1..125
                     /locus_tag="EYO87_13390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011746976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="sulfurtransferase"
                     /protein_id="HIC66966.1"
                     /translation="ATSGLHLALERIGHRNHSLYDGSWTEWGSFPDLPIATGDA"
     gene            128..1309
                     /locus_tag="EYO87_13395"
     CDS             128..1309
                     /locus_tag="EYO87_13395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010393633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate/tyrosine/aromatic aminotransferase"
                     /protein_id="HIC66967.1"
                     /translation="MLSNLKPQAPDKILMLVEEFKADTRQGKIDLGVGVYKDPQGVTP
                     VMRAVKQAEQRIWENQTTKAYTGLAGTPEYREAMAGMVLGEVPAERLASVATVGGTGA
                     IRQGLELARLANPDLTVYVSDPTWPNHLSILKFMGLPFVEYRYFDNDSRGVDFEAMKA
                     DIARAGRGDIVLLHGCCHNPTGANLTPEQWQEVVSILEQSGAVPLIDLAYQGFGDGLE
                     ADAEATRLVARSLPEVLIAASCSKNFGIYRERTGILMALAEGREARDLTQGSMAYLNR
                     QNYSFPPDHGARIVSTILADAALRADWQAELEEVRNTMLGLRSQLASELRELSGSDRF
                     DFIADHRGMFSRLGATPDQVQSLKSESAIYMVGDSRLNIAGLNGHTVPILARAIIEAG
                     I"
     gene            complement(1512..2087)
                     /locus_tag="EYO87_13400"
     CDS             complement(1512..2087)
                     /locus_tag="EYO87_13400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66968.1"
                     /translation="MDIIGDNGLSIVGGKLYPGFETPPAPDGAVLIGTDAAGNNWCYV
                     QRLQTARVVISNANNTSAPQQITYSVSSGSTIGFSQKFGVSVEVSAGISFLINVSAKV
                     QISGEIGFSQAFSKLESTEITAQTAPGVKTTIYQGTIVMSYYKLSNDYTGYQNYCTQT
                     WENMSTDVVETNAYETTETPLPTLTDLKAMV"
     gene            complement(2554..>2740)
                     /locus_tag="EYO87_13405"
     CDS             complement(2554..>2740)
                     /locus_tag="EYO87_13405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycerol-3-phosphate acyltransferase"
                     /protein_id="HIC66969.1"
                     /translation="RISSLSALLAAALSPVVAWATGRGDLAAVCAFMAVLIFIRHKAN
                     IARLMNGSEPRIGRGKG"
BASE COUNT          527 a          832 c          853 g          528 t
ORIGIN      
        1 ccgctacttc tgggttgcac ctggcgctgg aacggatcgg ccaccgcaac cactcgctct
       61 atgacggaag ctggaccgaa tggggcagct ttcccgacct gccaatcgca accggagacg
      121 cctgacaatg ctgtccaacc tgaaaccgca agcccccgac aagatcctga tgctggtcga
      181 ggaattcaag gccgataccc gtcagggcaa gatcgacctt ggcgtcggcg tctacaagga
      241 tccgcagggc gtgacgccgg tgatgcgggc cgtcaagcag gccgaacagc gcatctggga
      301 gaaccagacc accaaggcct ataccggcct tgcgggcacc ccggaatatc gcgaggcgat
      361 ggccgggatg gtgctgggcg aggtgccggc cgaacgtctg gcctccgtgg cgacggtggg
      421 cggaaccggc gcgatccggc aaggcttgga actggcccgg ctggcgaacc cggatctgac
      481 cgtctacgtt tcggatccga cctggccgaa ccacctgtcg atcctgaaat tcatgggcct
      541 gcccttcgtc gaataccgct atttcgacaa cgacagccgg ggcgtcgatt tcgaggcgat
      601 gaaggccgat atcgccaggg cgggccgcgg cgacatcgtt ctgctgcacg gttgctgcca
      661 caatccgacc ggtgcgaacc tgacgccgga acaatggcag gaggtcgtct cgatccttga
      721 acaatccggc gcggtgccgc tgatcgacct ggcctatcag ggcttcggcg acggtctgga
      781 agccgatgcc gaagcgacgc ggctggtcgc gcgcagcctg cccgaagtgc tgatcgccgc
      841 ctcgtgcagc aagaatttcg gcatctaccg cgagcggacc ggcattctga tggcgctggc
      901 cgagggccgt gaggcgcgcg acctgacgca gggcagcatg gcctacctga accgtcagaa
      961 ctattccttc ccgcccgatc atggggcgcg catcgtcagc acgatccttg cggatgccgc
     1021 tctgcgggcc gactggcagg cggaactgga ggaggtccgc aacacgatgc tggggctgcg
     1081 cagtcaactg gcctccgagc tgcgcgaatt gtcgggcagc gaccggttcg atttcatcgc
     1141 cgatcaccgc ggcatgttct cgcgcctcgg tgccacgccc gatcaggtgc agtccctgaa
     1201 aagcgagtcc gcgatctaca tggtcggcga ttcgcggctg aacatcgccg ggctgaacgg
     1261 acacaccgtc ccgatcctgg cccgcgccat catcgaggcg gggatctgag ggaacgcgcc
     1321 ctggcggtga tccggcgggg cgcgaagccc ttgcatcccg cgcccaaggg gcgccgttcg
     1381 tccgccgcgg cccccttctg tcatgcggtc atcgggttgg ggggggcgca gggctgtcga
     1441 acttccccgg cgcggtgaag aagctgtcaa gccacggcag ccgcgtcagg cgatccgcgc
     1501 ccatgcctgg gttataccat ggccttgaga tccgtcagtg tcggcaacgg tgtttctgtc
     1561 gtctcataag catttgtttc gacgacatcg gtgctcatgt tttcccaggt ctgggtgcaa
     1621 taattctggt atccggtgta atcattgctg agtttgtaat atgacatcac gatcgtgccc
     1681 tgatagatcg tcgttttgac gcccggcgcc gtctgtgcgg tgatttcggt gctttccagc
     1741 ttggaaaacg cctgtgaaaa accgatctcg ccgcttatct gcaccttcgc gctgacattg
     1801 atcaggaagc ttatgcctgc gctcacctct accgagacgc cgaatttctg gctgaagcca
     1861 atggtcgagc cggagctgac cgaataggtg atctgctggg gggcgctggt attgttggcg
     1921 ttgctgatga cgacccgcgc ggtctggaga cgctggacat agcaccagtt gttgcccgct
     1981 gcatcggtcc cgatgagaac cgcaccgtcc ggcgcgggcg gggtctcaaa tccgggataa
     2041 agctttccgc ccacgattga caatccgttg tcaccgatga tgtccatgtc cgttccattc
     2101 ctcgaaaatt gcattggtaa agggtcaagt tctccccggg cgggaagatt atgattcttg
     2161 gcacacgcca atcttgccaa ccagggtcat accggtccgc gcggtgttgc aggtcatctt
     2221 cgtcagcctg atcgcgaggt tgcgaaacgt tcagatcggt cggaaacaga gcaagacggt
     2281 ttccaaacgc cgaaggctcc ccgtgacagc ggattgtctg gataacggcc agccttcgac
     2341 gagatcggaa tcgccgatga cgagagccct atagtaaaca aaaaacagtc ttatagtaaa
     2401 caaaaattat ataaagcgtc tcatggaaag cttccgcagt caatatcggg aattctgaac
     2461 cggggtgaat accagatttc tgcactggaa aggttcgcaa agtgtttctg gggtggccat
     2521 attcgccctg atccggcagg ggcgtcgggc gcgttacccc tttccccgcc ctatccgcgg
     2581 ttcgctgcca ttcatcagcc gcgcgatatt cgccttgtgg cggatgaaga tcagcaccgc
     2641 catgaaggcg cagacggcgg ccaggtcgcc gcgcccggtt gcccatgcga cgaccggcga
     2701 caaggccgcc gccagcagcg ccgaaaggct ggaaatgcgc
//
LOCUS       DTVW01001024            2523 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2257497, whole
            genome shotgun sequence.
ACCESSION   DTVW01001024 DTVW01000000
VERSION     DTVW01001024.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2523)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2523)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2523
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2257497"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1175
                     /locus_tag="EYO87_13410"
     CDS             <1..1175
                     /locus_tag="EYO87_13410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018000186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="HAMP domain-containing histidine kinase"
                     /protein_id="HIC66970.1"
                     /translation="IFGFPDPVERLQGLSFVSAVEPVRPRSPARAEDRAEPLLAMARR
                     VWGPDEALRFFRAEAAAQGKSGYLPDPTPDFLTRLERRLAGAIGAATAHAMIDRVAGG
                     VALTVADLMQVASEARRAKEETRRLESARAELARTAGQLREANDKLTALSVQKDAFLG
                     QISHELRTPMTSIRAFSDIMKTPDLSEAERRNFAGIIHQEAGRLTRLLDDLLDLSVLE
                     SGQARLSVSAVNLHDLIGRAVQAASATRPERSFTLDRDMPSEHLGVITDADRLLQVLI
                     NVVTNARKYCDAERPVLTIRVHRRAGGGAVIEIADNGRGIDRARQSLIFEKFSRLNDP
                     ARAGGAGLGLAICREIMTVLGGDIAYLPGQGGAAFRIVLPPHPAAAGRSVGTAGSP"
     gene            1239..2381
                     /locus_tag="EYO87_13415"
     CDS             1239..2381
                     /locus_tag="EYO87_13415"
                     /inference="COORDINATES: protein motif:HMM:PF01052.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FliM/FliN family flagellar motor switch protein"
                     /protein_id="HIC66971.1"
                     /translation="MADEAEMEQAHPAGTGVLKRLLQARVRAAEGAGKAPQLPQTAPV
                     TPARATATAIGRAADRLYGLGVRPVEVRPGALTLAELPELLPDPALLAVLQGPGDAVG
                     VMSLCPQTVTALIEIQTLGRVTGRPLARRRLTRSDATLCADFIDTFLSELAQEGRGVE
                     GLEEFRGFRYATHIDDARPLALMMEDRAYRSLGLKLLLGGSEAREGRLFLALPQPRPD
                     AERPQPALAQPAVATAPSKRPAVPPLVSLRSATQQAPVEVVGILCRRRMSLRELRGLV
                     PGKILALPRVSLSDTRIETADGQVLAIGKFGEADGCHAIRLRDPVAPAESAPAAVPAP
                     EAPMMAPTAGPDLPIGDLHRPDAFRPDPTTAATVSPPERARGSKAG"
BASE COUNT          381 a          859 c          876 g          407 t
ORIGIN      
        1 cgatcttcgg ctttcccgat ccggtcgagc ggttgcaggg cctgtccttc gtcagcgcgg
       61 tcgagccggt ccgcccgcgc agcccggccc gcgccgagga ccgggccgag cccctgctgg
      121 ccatggcccg gcgcgtctgg gggccggacg aggcattgcg ctttttccgc gccgaggctg
      181 cggcgcaggg caagtccggc tatcttcccg atccgacgcc cgattttctg acacggctgg
      241 aacggcggct ggcgggcgcg atcggggcgg cgacggccca tgcgatgatc gaccgcgtgg
      301 cgggcggggt cgcgctgacg gtggccgacc tgatgcaggt cgccagcgag gccaggcgtg
      361 ccaaggagga aacccggcgg ctggaatcgg cccgcgcaga acttgcccgc accgcaggcc
      421 aattgcgcga ggccaacgac aagctgaccg cgctgtcggt gcagaaggat gcgttcctgg
      481 gtcagatcag ccatgaattg cgaacgccca tgacctcgat ccgagccttt tccgacatca
      541 tgaagacgcc ggacctgtcc gaagcggagc gccggaattt cgccgggatc atccatcagg
      601 aggccggccg gctgacccgg cttctggacg atcttctgga cctgtcggtg ctggaaagcg
      661 ggcaggcgcg gctttcggtc agcgccgtca acctgcatga tctgatcggg cgggccgtgc
      721 aggcggcctc ggcgacgcgg cccgagcgaa gctttaccct ggaccgcgac atgccctcgg
      781 aacatcttgg ggtgatcacc gatgccgatc ggctgctgca ggtgctgatc aatgtcgtca
      841 ccaatgcgcg caaatattgt gacgcggagc gtccggtcct gaccatccgg gttcatcgtc
      901 gcgcgggcgg cggcgcggtg atcgagatcg ccgataacgg ccggggcatc gacagggccc
      961 ggcaaagcct catattcgag aagttttcgc gcctcaacga ccccgcgcgg gcgggcggcg
     1021 cgggccttgg ccttgcgatc tgccgagaga tcatgacggt cctgggcggg gacatcgcct
     1081 atttgccggg ccaggggggc gcggccttcc gtatcgttct gcctccgcat ccggcagcgg
     1141 cgggccggag cgtcgggacc gccgggtcgc cgtaaacatt ttctttacgg ctctttgtca
     1201 aattgccctg cgacaggacg ggacgaatcg gattcggtat ggcggacgaa gcagagatgg
     1261 aacaggcaca tccggccgga accggcgtgt tgaaacgtct gttgcaggcc cgggtccggg
     1321 ccgccgaagg ggcgggaaag gcgccacaat tgccacagac agcgccggtc acgcccgcgc
     1381 gcgccaccgc gaccgccatc ggtcgcgcgg cggatcggct ttacgggctg ggcgtccggc
     1441 cggtcgaggt caggcccggg gcgctgacgc tggcggaact gcccgaattg ctgcccgatc
     1501 cggccttgct ggcagtgttg cagggacccg gcgatgcggt gggcgtgatg tccctgtgtc
     1561 cgcagaccgt caccgcgctg atcgagattc agaccctcgg ccgcgtgact ggccggccgc
     1621 tggcccggcg ccgcctgacc cgcagcgacg ccaccctttg cgcggatttc atcgacacgt
     1681 tcctgtccga actcgcgcag gagggccggg gcgtcgaggg gttggaggaa tttcgcggct
     1741 ttcgctatgc cacccatatc gacgatgccc gccccctggc gctgatgatg gaggaccgtg
     1801 cctatcgcag tctcgggttg aaactgctgc tcggcggcag cgaggcgcgc gaaggcaggc
     1861 tgtttctggc cctgccgcag ccccgacccg atgcggaacg cccgcagccc gcgctggccc
     1921 agcccgcggt cgcgacggcg ccgtcgaaaa gacccgcggt cccgccgctg gtcagtcttc
     1981 gttccgcaac ccagcaggcg ccggtcgagg tcgtgggcat tctctgtcgc cgccggatga
     2041 gcctgcgcga gctgcgcggc ctggtgccgg gcaagatcct ggccctgccg cgcgtcagcc
     2101 tgtccgatac ccggatcgag accgcggacg gccaggttct ggccatcggc aagtttggcg
     2161 aagccgatgg ctgccacgcg atccgcctgc gcgatcccgt tgcgccagca gaatccgccc
     2221 ccgcggccgt ccctgcaccc gaggcgccga tgatggcgcc gaccgccggc cccgacctgc
     2281 cgatcggcga tctgcatcgt cccgacgcct tccgccctga tccgactact gcggcaacgg
     2341 tgtcaccgcc ggaacgcgcc cgggggtcca aagcgggcta gcaggcggct tttcacgctt
     2401 ttcccttgaa ttccgcccgc tccggccgca tttaacccgc gtcccgaatc ctgcggggcg
     2461 accgatatgg agtgaccatg gccaaggaag aaatgctcga attccccggc gtcgtgaagg
     2521 aac
//
LOCUS       DTVW01001025            1685 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2257521, whole
            genome shotgun sequence.
ACCESSION   DTVW01001025 DTVW01000000
VERSION     DTVW01001025.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1685)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1685)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1685
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2257521"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            98..1006
                     /locus_tag="EYO87_13420"
     CDS             98..1006
                     /locus_tag="EYO87_13420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66972.1"
                     /translation="MTARDAWFGLLDPVEQPKGDDQVLAYFSSPGGWETDPQAEEKAR
                     RRQALYKLAGAYARAFASVAGDPAASGVNDLQLAQYRNEVERAISLRDAVRLHSGDAV
                     DMKQFEPAMRHLIDTYIKADGSEVISHLDDISLIDLVASKGAAVEVELPSSLKKKREN
                     VAEAIENNVRRLIIDETPVNPKFYERMSELLTDLVRKRKDDAIAYAEYLEKIAELVRA
                     VKAGHGSEYPPTMTTPGRKALYDNLGQDEAATIAVDEAIRSTAQTGWRGNKMKERMLR
                     RKLLEILDSDDAVDSIIEIIRSHDEY"
     gene            993..>1685
                     /locus_tag="EYO87_13425"
     CDS             993..>1685
                     /locus_tag="EYO87_13425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015500224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family peptidase"
                     /protein_id="HIC66973.1"
                     /translation="MMNTELIEIAGLSVELVRKPIKNLHIGVYPPAGRVRVAAPPAIS
                     EDAVRVAVVTRLGWIKKKQREFEGQARQPERRYVSGETHFVFGKPFRLMVQPNDKNRC
                     AIRPDASDRLTMLVPAGSTPDQMARWMATWYRSQLREKAAPRIAKWSDRLSVPIPRWG
                     IRLMKTKWGSCNPEKGLVWLNLDLAKKPLAAIDYVIVHEMAHFVSPRHDDVFLNVLDR
                     NMPGWRQLRADLN"
BASE COUNT          370 a          475 c          551 g          289 t
ORIGIN      
        1 cgtcgaagac tacacttcgg gcgccttcga cgccttcgat gctgccgatg tcgaggggct
       61 gatttcttct cgggccgaaa aggcgggcga ggatctgatg accgcgcgcg acgcttggtt
      121 cgggcttctt gatccggttg aacagcccaa aggcgacgac caggtgcttg cctatttctc
      181 cagtcctggc gggtgggaga ccgatccgca ggccgaggaa aaggcccggc ggcgtcaggc
      241 gctttacaaa ctggcagggg cctatgcccg tgccttcgca tcggtggcgg gtgatcctgc
      301 cgcctcgggg gtcaacgacc tgcaactggc gcagtaccgc aacgaagtgg aacgggcgat
      361 ttcgctacgg gatgcggtgc gcctgcacag cggcgatgcc gtcgacatga agcagttcga
      421 acccgcgatg cggcacctga tcgacaccta tatcaaggcc gacggatccg aggtgatctc
      481 gcatctggac gatatcagcc tgatcgacct ggtggcgagc aagggggccg cagtcgaagt
      541 ggagttgccg agttccctga agaagaagcg cgagaacgtg gccgaagcca tcgagaacaa
      601 cgtgcgcagg ctgatcatcg acgaaacgcc ggtgaaccca aagttctacg agcgaatgtc
      661 agaactgctg actgacctcg taaggaagcg gaaggacgac gctatcgcct acgcggaata
      721 cctggaaaag atcgcggaat tggtcagggc ggtaaaggcg gggcacggta gcgaataccc
      781 accgaccatg accacgccag ggcgcaaggc gctctacgac aatctcggtc aggatgaggc
      841 cgcgaccata gcggttgatg aggcaatccg aagcacagcc caaacgggat ggcgcggcaa
      901 caagatgaag gagcggatgc tgcgacggaa gctgttggag atcctcgatt cagacgacgc
      961 cgtggacagc atcatcgaga tcatccggtc gcatgatgaa tactgagctg atcgagatcg
     1021 cagggctttc ggtggaactg gtccgaaagc cgatcaagaa tctgcatatc ggggtctatc
     1081 ctccggccgg tcgcgtgcgt gtcgctgccc ctccggccat cagcgaagat gccgtccggg
     1141 tcgcggttgt gacccggctg ggctggatca agaagaagca gcgcgagttc gaaggtcagg
     1201 cgagacaacc cgaacgccgg tacgtctccg gcgagaccca ttttgtattc ggcaaaccgt
     1261 ttcggcttat ggtccagccg aacgacaaga accgctgtgc gattcggcca gacgcttcgg
     1321 atcgcctgac gatgttggtg ccagcaggct caacgcccga ccagatggca cgctggatgg
     1381 cgacgtggta ccgatcgcag ctgcgggaga aggccgctcc ccgcatcgcc aagtggtcgg
     1441 atcggctcag cgtaccgata ccgcggtggg gcatcaggtt gatgaagacg aagtggggca
     1501 gctgcaatcc cgaaaagggg ctggtgtggc taaacctcga cctggcgaag aagcctctgg
     1561 ccgccatcga ctacgtcatc gtgcatgaaa tggcccattt cgtatcaccg cgacacgacg
     1621 acgtgttctt gaacgttcta gatcggaaca tgccgggatg gcgacagctc cgggcggacc
     1681 ttaac
//
LOCUS       DTVW01001026            1542 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2259491, whole
            genome shotgun sequence.
ACCESSION   DTVW01001026 DTVW01000000
VERSION     DTVW01001026.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1542)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1542)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1542
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2259491"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            455..>1542
                     /locus_tag="EYO87_13430"
     CDS             455..>1542
                     /locus_tag="EYO87_13430"
                     /EC_number="3.6.1.63"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014879104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-D-ribose 1-methylphosphonate
                     5-triphosphate diphosphatase"
                     /protein_id="HIC66974.1"
                     /translation="MMILANAELILPDRVMRGAIHVEDGVIVAISEGAAVPPGAMDCG
                     GDHVAPGLVELHTDNLERHIQPRPGVDWPHAAAIFAHDGELASAGITTVLDAVRVGSI
                     PEDGAGYAKYARPLVSEINALQAEGRTRISHWIHLRAEICSRTLLDELAEFGPQDRVR
                     LVSLMDHTPGQRQFRDIAKLARYVQGRKGLTDAAFADHVARLTALRDRFGAAHEAGAV
                     AAARRLGATLASHDDTTADQVATSAGYGIRLAEFPTTEEAARACHDHGIAVMMGGPNL
                     IRGGSHSGNVAAEAMARDGLLDIISSDYVPSSLLLGAQHLARVWKDPARAFATVTDAP
                     ARATGLTDRGRIGTGLRADLIRLVDMDRT"
BASE COUNT          217 a          501 c          555 g          269 t
ORIGIN      
        1 acttgtctgt tcggataccg attattgaca gcgttcaggc gcggctgctg gatctgctgc
       61 gcgggcttgt gcgcgacatg ggattgtccg cgatcgtggt gacgcatgat cttgccgtgg
      121 tgcggctggc ttggcaggcg catggcctgt gctacggtgt ttcctggccg gaacccggtg
      181 gcgggacggt gctggtcgac ctgtcgcggc gctgcctggc cgatgcggcg cgggtctttc
      241 cggggctggg cgtgatccat gtcggcgcgg aaccggcgct ttgtgtcgca aggctggctg
      301 cgcgcgggcg cgaggatcgg gcgcagatcg ccgatcgcat cgcccgcgag gcggtcttcg
      361 atccggggaa cctgcgcctg attcgtatcg acaattccgg cgatccggcg gtttcgacga
      421 tcgcctttct cgctgcgctg gacgaggttg ttccatgatg atccttgcaa atgccgaact
      481 gatcctgccc gaccgcgtga tgcgcggcgc tatccatgtg gaggacggcg tgatcgtggc
      541 catcagcgag ggcgccgccg ttccgcccgg cgcgatggat tgcggcggcg accacgtcgc
      601 ccccggcctg gtggagctgc ataccgacaa tctggaacgg catatccagc cgcgtcccgg
      661 cgtggattgg ccccatgctg ccgcgatctt cgcccatgac ggtgaactgg cctcggccgg
      721 gatcaccacg gtcctcgacg cggtaagggt cgggtcgatc cccgaagacg gggcgggcta
      781 cgcgaaatat gcgcgcccgc tggtcagcga gatcaatgct ctgcaggccg agggacggac
      841 ccggatcagt cactggatcc atttgcgggc cgagatttgc agccggaccc tgctggacga
      901 actggccgaa ttcgggccgc aggatcgggt ccggctggtc agcctgatgg atcacacgcc
      961 cggccagcgt caattccgtg acatcgccaa gctggcccgg tatgtgcagg gcaggaaggg
     1021 gcttaccgat gcggccttcg ccgatcatgt cgcgcgcctg accgcgctgc gcgaccgttt
     1081 cggcgccgcg cacgaggccg gcgcggtcgc cgccgcgcgc cgcctgggcg cgacgctggc
     1141 cagccatgac gacaccaccg ccgatcaggt cgcgaccagc gccggctatg gcatccgcct
     1201 ggccgagttc cctacgacgg aagaggccgc gcgcgcctgc cacgaccacg gcattgcggt
     1261 gatgatgggc gggccgaacc tgatccgggg cggatcccat tcgggcaatg tcgcggccga
     1321 ggcgatggcg cgggacggat tgctggatat catctcgtcc gactacgtgc cctccagcct
     1381 gttgctgggg gcgcagcatc tggcgcgtgt gtggaaggat ccggcgcgcg ccttcgcgac
     1441 cgtcaccgac gccccggcgc gcgcgaccgg cctgacggat cgcggccgga tcgggaccgg
     1501 cctgcgcgcc gatctgatcc ggctggtcga catggaccgg ac
//
LOCUS       DTVW01001027            1479 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2261207, whole
            genome shotgun sequence.
ACCESSION   DTVW01001027 DTVW01000000
VERSION     DTVW01001027.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1479)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1479)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1479
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2261207"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..600
                     /locus_tag="EYO87_13435"
     CDS             <1..600
                     /locus_tag="EYO87_13435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014200218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66975.1"
                     /translation="KNATTGAAMVPLLTLGIPGSAATAIMLAAMMLQGVNPGPLLFIM
                     DPSMVYTIFAAMIIANVLMIGAGVGVAQMFSTLMRTPPAILAGFIVILSLIGAYGVRN
                     NIFDVYVCLVFGVIGWAMKRVGFPSAPLVLGVILGPLAERYFLTSIANSRQDYTVFFT
                     RPISATILSLALIFVLWSLWPSVRTRIGRQPAQAKPKER"
     gene            597..>1479
                     /locus_tag="EYO87_13440"
     CDS             597..>1479
                     /locus_tag="EYO87_13440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009817222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase"
                     /protein_id="HIC66976.1"
                     /translation="MMNQPRIDTSPRVSDEIRKTTCYMCACRCGINVHMKDGRVAYIE
                     GNRDHPVNKGVLCAKGSAGIMQVNAPSRLRAPLRRVGPRGSGRFQEISWDEALGLAKD
                     WLTPIRKNDPSKLAFFTGRDQSQSFTSFWAQAFGTPNYAAHGGFCSVNMAAAGIYTMG
                     GAFWEFGQPDWDRAKLFMLFGVAEDHDSNPIKMGIGKLKARGARIIGVNPIRSGYNAV
                     ADEWLGITPGTDGLLILALVHCLMTAGRIDLDYLARYTDAPLLVDEQTGLFLRDQDGR
                     ALVIDRATGGLTAFDGRG"
BASE COUNT          236 a          467 c          496 g          280 t
ORIGIN      
        1 aagaacgcca ccaccggggc ggcgatggtg ccgctgctga cgctgggcat tcccggcagc
       61 gcggcaaccg cgatcatgct ggccgcgatg atgctgcaag gggtcaatcc cggcccgctg
      121 ctgttcatca tggatccgtc gatggtctat acgatcttcg ccgccatgat catcgccaac
      181 gtgctgatga tcggcgcggg cgtgggcgtg gcgcagatgt tctcgaccct gatgcggacg
      241 ccgccggcga tcctggccgg tttcatcgtc atcctcagcc tgatcggggc ctacggggtg
      301 cgcaacaaca tcttcgacgt ctatgtctgc ctggtcttcg gcgtcatcgg ctgggcgatg
      361 aagcgggtgg gctttccctc ggcgccgctg gttctggggg tgatcctggg accgcttgcg
      421 gaacgctatt tcctcacctc gattgcaaat tcccgtcagg attacacggt cttctttaca
      481 cgtccgatca gcgcgacgat cctgtcgctg gcgctgatct tcgtgctgtg gtcgctgtgg
      541 ccctcggtcc ggacgcggat cggccgccag cccgcgcagg ccaagcccaa ggagcgatga
      601 tgaaccagcc ccggatcgac acctcgccca gggtttccga cgaaatccgc aagaccacct
      661 gctacatgtg cgcctgccgc tgcggcatca acgtccacat gaaggacggc cgcgtcgcct
      721 atatcgaggg caatcgcgac catcccgtga acaagggcgt gctgtgcgcc aagggttcgg
      781 ccgggatcat gcaggtcaat gcgccatccc ggctgcgcgc gcccctgcgc cgggtcgggc
      841 cgcgcggttc gggccggttt caggagattt cctgggacga ggctctgggt ctggcgaagg
      901 actggctgac gcccattcgc aagaacgatc cgtcgaaact ggccttcttc accggccgcg
      961 accagtcgca aagcttcacc agcttctggg cgcaggcctt cggtacgccg aattatgccg
     1021 cccatggcgg attctgttcg gtcaacatgg cggcggcggg catctatacg atgggcggcg
     1081 cgttctggga attcggccag cccgactggg accgggcgaa gctgttcatg ctgttcggcg
     1141 tggccgagga tcacgacagc aatccgatca agatgggcat cggcaagctg aaggcgcgcg
     1201 gcgcgcgcat catcggcgtc aatccgatcc ggtcgggcta taatgcggtg gccgacgaat
     1261 ggctggggat cacgccgggc acggatgggc tgctgatcct ggcgctggtt cattgcctga
     1321 tgacggcggg ccggatcgat ctggattatc tggcgcgcta taccgacgcg ccgctgctgg
     1381 tcgatgagca gaccggcctg ttcctgcgcg atcaggacgg cagggcgctg gtgatcgacc
     1441 gcgccaccgg cgggctgacc gccttcgacg gcaggggcg
//
LOCUS       DTVW01001028            1432 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2261571, whole
            genome shotgun sequence.
ACCESSION   DTVW01001028 DTVW01000000
VERSION     DTVW01001028.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1432)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1432)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1432
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2261571"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1099)
                     /locus_tag="EYO87_13445"
     CDS             complement(<1..1099)
                     /locus_tag="EYO87_13445"
                     /inference="COORDINATES: protein motif:HMM:PF03825.14"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phenylpropionate MFS transporter"
                     /protein_id="HIC66977.1"
                     /translation="MQPRTPALRLAFYYAAYFGAVGVFLPFWPVWLSARGLSEPEIGF
                     LIAAATGLRVLTNPLIAQAADRGGERKRLMGLLSGLAVIAFLFFQGAHGFWPILLVTL
                     FFFTFWSATQPLAESLTMLGVGAAGLDYGRIRLWGSIAFIGASIGLGWILTGRGADLI
                     YAAALAGIVITFIACLILPGYKAPGSGPHRLALWPVIRNVRFMVFLFAAGLIQASHAV
                     LYGFGTIHWRSAGYSDGMIGLFWAEGVFAEIILFAFGAVLLRRIGAVGLILMGGVAGV
                     IRWAVMGIGDDIYWIVIVQSLHAFTFGATHLGAMHFITETVAPSHSASAQSIYAAFVA
                     GIAMGIASFFSGLLYGQFAGQAFFAMSAAAAA"
     gene            complement(1130..>1432)
                     /locus_tag="EYO87_13450"
     CDS             complement(1130..>1432)
                     /locus_tag="EYO87_13450"
                     /inference="COORDINATES: protein motif:HMM:PF01019.19"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HIC66978.1"
                     /translation="GQYQACGHAHLLTNLLDWDMDLQEALDMTRVFPDADDPEQRVQV
                     ESGLPEAVRAGLEALGHQTYIPGRPIGGGQAIWIDWQQGVLRGASEPRKDGMAIGY"
BASE COUNT          330 a          457 c          445 g          200 t
ORIGIN      
        1 cggcggcggc ggcggcggac atggcaaaaa aggcctggcc ggcaaattgc ccgtaaagca
       61 atccggaaaa aaatgaagcg atgcccatgg cgatgccggc gacaaaggcg gcgtaaatgc
      121 tttgcgcgct tgccgaatgg ctgggggcga cggtctcggt tatgaagtgc atggcgccca
      181 gatgggtggc gccaaacgta aatgcatgca ggctttgcac gataacgatc caatagatgt
      241 catcgccgat acccataacc gcccaacgga tcacgcccgc gacgccgccc atgaggatca
      301 atccgacggc gccaatgcgg cgcaacaaaa cggcgccaaa tgcaaacagg ataatttccg
      361 cgaagacacc ctcggcccaa aacaggccga tcatgccgtc cgaataaccg gcgcttcgcc
      421 aatggatggt gccgaagccg tacaaaaccg cgtggctggc ctggatcagc ccggcggcaa
      481 acagaaaaac catgaaccgg acgttgcgga tgaccggcca gagcgccagc cggtgcggcc
      541 ccgatcctgg cgccttgtag cccggcagga tcaggcaggc gataaaggtg atcacaatcc
      601 ccgccaaggc ggcggcatag atcaaatcgg cgccgcgtcc ggtcaatatc cagccgaggc
      661 cgatcgacgc accgataaag gcgatggaac cccagaggcg gatgcgcccg taatccagcc
      721 cggccgcgcc gacgccgagc atggtcaggc tttccgccaa gggctgggtc gccgaccaaa
      781 aggtgaagaa aaacagcgtc accagaagga tcggccaaaa gccatgggcg ccttggaaaa
      841 acaggaaagc gataaccgcc agcccggaaa gcaaccccat caggcgcttg cgctcgccgc
      901 cccggtcggc ggcttgggcg atcagcggat tggtcagcac ccggagcccg gtggcggcgg
      961 cgataaggaa gccgatttcc ggctcgctca atccccgcgc cgacagccac accggccaaa
     1021 agggcaggaa cacgccgacg gcgccgaaat aggccgcata gtaaaaggca agccttaaag
     1081 cgggtgtgcg gggttgcatg gcttatccca ggcagttccc accggcggcc taataaccga
     1141 tggccatgcc atccttcctg ggctcggacg cgccgcgcag cacgccttgc tgccaatcga
     1201 tccagatggc ttggccgccg ccgatcggcc ggcccgggat ataggtctgg tgtcccagcg
     1261 cctcaagccc ggcgcgcacc gcttcgggca ggccgctttc cacctgaacc ctttgctcgg
     1321 gatcatccgc atcgggaaat acgcgggtca tgtcgagggc ttcctgcaag tccatgtccc
     1381 agtccagcaa gttggtcaaa agatgggcgt gcccgcaggc ctggtactgg cc
//
LOCUS       DTVW01001029            3853 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2262622, whole
            genome shotgun sequence.
ACCESSION   DTVW01001029 DTVW01000000
VERSION     DTVW01001029.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3853)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3853)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3853
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2262622"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..476
                     /gene="rpsD"
                     /locus_tag="EYO87_13455"
     CDS             <1..476
                     /gene="rpsD"
                     /locus_tag="EYO87_13455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011909175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HIC66979.1"
                     /translation="TQLRAKQKLKGYYGDLTEKQFRRIYAEAERVKGDTGENLIGLLE
                     RRLDAVVYRAKFVPTIFAARQFVNHGHVEVNGKRVNIASYRVKEGDVISIRERSRQLA
                     IVLEAVGLPERDVPDYLEVDHNKMTATFVRIPALGDVPYAVQMEPNLVVEFYAKN"
     gene            653..1696
                     /locus_tag="EYO87_13460"
     CDS             653..1696
                     /locus_tag="EYO87_13460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001313957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /protein_id="HIC66980.1"
                     /translation="MARRDISFCSFNLLNLQLPGRAVYSDRDGWPQDVYRRKIDFTAR
                     ALARMEADLFGFQELWAPEALQEAVDQAGLGESHVMIAPPDHPGTRITCAAAVRRHML
                     VGDPDWITDFPPELVLRSTGDDPQQPRISVALEGFSRPVLHLRVQPDPSTPVIEVFVC
                     HFKSRRPAEIWREGDWYDREIHGPHANALGYAISTIRRTAEAAALRVIMTRLAKGSDN
                     PVVVLGDMNDGKDSNTLNLLTEQPRYLTALSRGGGDNALYTAQVLQEYRSVRDVYYTH
                     IYQEQHDSLDHVLVSEQFYDNSRKRLWRFDDMLLLNDHLDWNDHKTSGSNDHGIVLAR
                     FRWSPPTPAMPVL"
     gene            1771..2862
                     /locus_tag="EYO87_13465"
     CDS             1771..2862
                     /locus_tag="EYO87_13465"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005794276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HIC66981.1"
                     /translation="MTGIEPQPGIMEIAPYVSGESRLAGHDDVLKLSSNENPLGCSPA
                     ARAAFAAAAPDLHRYPATDHAALRRAIGEVHGLDPDRIICGVGSDEVLQFVAHAYAGP
                     GDEIITTEHGFSMYPILARMVGAIPVTVPEAVRRIDVDAILGAVTERTRIVFIANPAN
                     PTGTMLGADDLSRLAEGLPPRAILVHDGAYTEFADGFDGGASLVDRHPNAFMTRTFSK
                     IHGLGGLRIGWGYGVRGVIDVLNRIRQPFNLSSAQMAAAEAAVRDTAFRDHCADLNAR
                     MRRRMRESLIQMGIGCDESFANFVLARFADPDEAEAADAALRGDGILVRRVGGYGLPA
                     ALRITLGDEIGTTRVIDSLGRFMAARRPA"
     gene            2859..3770
                     /locus_tag="EYO87_13470"
     CDS             2859..3770
                     /locus_tag="EYO87_13470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011747727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate/arogenate dehydrogenase family
                     protein"
                     /protein_id="HIC66982.1"
                     /translation="MSVIYDRVALIGLGLIAGSMAHAMRKAGLAGEIVGHARSDATRR
                     TAREIGLCDRIEDSADRAVAGADLVVLAVPVGAMGDVAATIAPHLKPGATVTDVGSVK
                     QAVIDAVGPHIPNGVHFIPGHPLAGTEHSGPRSGFATLFRNRWWLLTPLPGSDPAAVA
                     RLSDLVRAMGAKTDRMEPGHHDLVLAVTSHAPHLIAYTMVGVADHLSRVTDEEVIQYS
                     AAGFRDFTRIAASDPVMWRDVFLTNRGAVLEMLGRLTEDLAAIQRAIRDGDGETLEAL
                     FTRTREIRRGVIDAGQHIPPVPRVTST"
BASE COUNT          636 a         1274 c         1269 g          674 t
ORIGIN      
        1 gcacccagct gcgcgccaag cagaagctca agggctatta cggcgatctg accgaaaagc
       61 agttccgccg catctatgcc gaggccgagc gcgtcaaggg cgataccggc gagaacctga
      121 tcggcctgct ggaacggcgt ctggatgccg tcgtctatcg cgccaaattc gtgccgacca
      181 tcttcgccgc gcgtcaattc gtcaaccacg gtcatgtcga ggtgaacggc aagcgcgtca
      241 acatcgcctc ctatcgtgtc aaggaaggtg acgtgatctc gattcgcgaa cgttcgcgcc
      301 agctggccat cgttctggag gccgtcggcc tgcccgagcg tgacgtgccg gattatctgg
      361 aagtggacca caacaagatg accgcgacct tcgtgcgcat cccggccctg ggcgacgtgc
      421 cgtatgccgt gcagatggag ccgaacctgg tcgtcgaatt ctacgcgaag aactgatctt
      481 cgccgacacc cgatcctcaa gggccgcatc ttcggatgcg gcctttttcg tcgtgccgat
      541 gcggcagggt atggtgcggc agcccgcgac gatttcgata ttggcttcat aggcctcgtg
      601 gtatcatcgc cgcactttgc gccctttccc tgctacgaga ccggaggccg ggatggcccg
      661 acgcgatatc tcgttctgtt cgttcaacct gctgaacctt cagctgccgg gccgcgcggt
      721 ctattccgac agggacggct ggccccagga tgtctatcgg cgcaagatcg actttaccgc
      781 gcgggccctg gcccggatgg aggccgatct gttcggcttt caggaattat gggcgccgga
      841 agccttgcag gaagcagtgg atcaggccgg cctgggcgaa agccatgtca tgatcgcgcc
      901 acccgatcat ccgggcacgc ggatcacctg cgcggcggcg gtgcgccgtc acatgctggt
      961 gggagatccg gactggatca ccgattttcc gcccgagctc gtgttgcgct cgaccgggga
     1021 cgatccgcag cagccccgga tctcggtggc gctggagggg ttttcgcggc ccgtcctgca
     1081 tctgcgcgtg cagcccgatc cctcgacccc ggtgatcgag gtcttcgtgt gccatttcaa
     1141 atcccggcgc ccggccgaga tctggcgcga aggcgactgg tatgaccgcg agattcacgg
     1201 cccccacgcc aatgcgctcg gctacgccat ctcgaccatc cgacgcaccg ccgaggcggc
     1261 ggcgctgcgg gtcatcatga cgcggctggc aaagggttcg gacaatcccg tcgtcgtgct
     1321 gggcgacatg aatgacggca aggattcgaa cacgctcaac cttctgaccg aacagccgcg
     1381 atatctgacc gcgctgtcgc gcggcggtgg cgacaacgcg ctctacacgg cgcaggtcct
     1441 gcaggaatac cgctcggtcc gcgatgtcta ttatacccat atctatcagg agcagcacga
     1501 cagcctggac catgtgctgg tcagcgagca gttctatgac aattcgcgca agcggctgtg
     1561 gcgattcgac gacatgctgc tgctgaacga ccaccttgac tggaacgatc acaagaccag
     1621 cggcagcaac gaccacggta tcgttctggc ccgtttcaga tggtcgcccc cgacgcccgc
     1681 catgcccgtc ctgtgacggc gccggcagcg tccactttcc ttgcccccgt tcccccgcta
     1741 tgagggcggc gaatgacggg ggagacgggc atgacaggga tcgaaccgca gccgggcatc
     1801 atggagatcg caccctatgt cagcggcgaa agccgactgg cgggccatga cgatgtgctg
     1861 aaactgtcct cgaatgaaaa tcccctgggg tgcagcccgg ccgcgcgggc cgcctttgcc
     1921 gcggcggcgc cggatctgca ccgctacccc gccaccgacc atgccgccct gcgccgggcg
     1981 atcggcgagg ttcacgggct ggatccggac cgcatcatct gcggtgtggg atcggacgag
     2041 gtgctgcaat tcgtcgccca tgcctatgcc gggccgggcg acgagatcat caccaccgag
     2101 catggctttt cgatgtatcc gatcctggcg cggatggtcg gcgcgatccc cgtcaccgtg
     2161 cccgaggctg tgcgccgcat cgacgtggac gcgatccttg gcgccgtgac cgaacggacg
     2221 cgcatcgtct tcatcgccaa ccccgccaac ccgaccggca ccatgctggg cgcggacgat
     2281 ctgtcgcggc tggccgaggg gctgccgccg cgggcgatcc tggtccatga cggagcctat
     2341 accgaattcg cggatggctt tgacggcggc gcctcgctgg tggaccggca tccgaacgcg
     2401 ttcatgacgc ggacattttc caagattcac gggctgggcg ggctacggat cgggtggggc
     2461 tacggcgtgc gcggcgtgat cgatgttctg aaccggatcc gccagccctt caacctgtcc
     2521 agtgcccaga tggcggcggc cgaggccgcg gtccgcgaca ccgcctttcg cgaccattgc
     2581 gccgacctga atgcaaggat gcgccggcgg atgcgcgaat cgctgatcca gatggggatc
     2641 ggctgcgacg agagtttcgc caatttcgtg ctggcccgct ttgccgatcc ggacgaggcc
     2701 gaagccgccg atgccgccct gcgcggtgac ggcatccttg tccgtcgcgt cggcggatat
     2761 ggcctgcccg ccgcgctgcg catcacgctg ggcgacgaaa tcggcacgac gcgcgtgatc
     2821 gacagcctcg gccgtttcat ggccgcgcgg agaccggcat gagcgtgatc tatgaccgtg
     2881 tggccctgat cggtctgggg ctgatcgcgg gctcgatggc ccatgcgatg cgaaaggccg
     2941 gattggccgg cgagatcgtc ggccatgccc gcagcgatgc cacgcgcagg accgcgcgcg
     3001 agatcggatt gtgcgaccgg atcgaggaca gcgccgacag ggccgtcgcg ggcgcggatc
     3061 tggtggtgct ggcggtgccg gtcggcgcca tgggcgatgt cgcggccacg atcgcgccgc
     3121 atctgaaacc gggcgcgacg gtaaccgatg tcggctcggt caagcaggcg gtcatcgacg
     3181 ctgtcggccc gcatatcccg aacggcgtgc atttcattcc cggtcatccc cttgcgggca
     3241 ccgaacattc cggcccccgc tcgggtttcg cgacactgtt caggaatcgc tggtggctgc
     3301 tgaccccgct gcccggcagc gatccggcag cggtggcgcg cctgtcggat ctggtccgcg
     3361 ccatgggcgc caagaccgac aggatggagc cgggccatca cgatctggtg ctggccgtga
     3421 ccagccatgc gccgcacctg atcgcctata cgatggtcgg cgtcgccgat catctcagcc
     3481 gcgtcaccga tgaagaggtg atccagtatt cggccgccgg gttccgcgac ttcacccgca
     3541 tcgccgcctc cgatccggtg atgtggcggg acgtcttcct caccaaccgg ggcgcggtgc
     3601 tggagatgct ggggcgtctg accgaggacc tggcggcaat acagcgtgcc atccgtgatg
     3661 gcgacggcga gacgctggag gctctgttca cccgcaccag agagatccgg cgcggcgtga
     3721 tcgacgccgg ccagcacatc ccgccggtgc cgcgcgtcac ttccacctga tcttaggcag
     3781 gcgcaggatt ttcaccggcc cgacgtaaaa cccgccgtcc tgcgccgtta gcggcgccgt
     3841 gatccggggc gga
//
LOCUS       DTVW01001030            1445 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2263712, whole
            genome shotgun sequence.
ACCESSION   DTVW01001030 DTVW01000000
VERSION     DTVW01001030.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1445)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1445)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1445
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2263712"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..503)
                     /locus_tag="EYO87_13475"
     CDS             complement(<1..503)
                     /locus_tag="EYO87_13475"
                     /EC_number="2.3.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_354693.1"
                     /note="FabB, beta-Ketoacyl-ACP synthase I, KASI; catalyzes
                     a condensation reaction in fatty acid biosynthesis:
                     addition of an acyl acceptor of two carbons from
                     malonyl-ACP; required for the elongation of short-chain
                     unsaturated acyl-ACP; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase I"
                     /protein_id="HIC66983.1"
                     /translation="MRRVVITGLGIVSPIGNNAAEVLESLRIGRSGIVFAPEYAEHGF
                     RSQVHGMPQIVLEDHIDKRNLRFMGPGAAYNFIAMEQAVKDSGLEEGDVSNPRTGLIM
                     GSGGPSTSNFFDAHQIVIEKGSPKRMGPFMVTRCMSSTNSATLATPFRIKGVNYSITS
                     ACSTSAH"
     gene            complement(524..1033)
                     /gene="fabA"
                     /locus_tag="EYO87_13480"
     CDS             complement(524..1033)
                     /gene="fabA"
                     /locus_tag="EYO87_13480"
                     /EC_number="4.2.1.59"
                     /EC_number="5.3.3.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 3-hydroxydecanoyl-ACP
                     dehydratase/trans-2-decenoyl-ACP isomerase"
                     /protein_id="HIC66984.1"
                     /translation="MAMTQTSFDRNDLLACARGELFGSGNAQLPEPPMLMMDRITDVS
                     EDRGAHGKGHVVAEFDIDPDLWFFACHFPGNPIMPGCLGLDGLWQLTGFNLGWRGWEG
                     RGYALGVGEVKLTGMVRPDRKLLRYFVDFTKAVQTRRLTMGVADGRVEADGEVIYQVK
                     DMKVALSTS"
     gene            complement(1158..>1445)
                     /locus_tag="EYO87_13485"
     CDS             complement(1158..>1445)
                     /locus_tag="EYO87_13485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC66985.1"
                     /translation="PDRRRIDRVALFRAAPGLTITPDHRFNIAEYNTYSCPWHHNLTA
                     TIASFRVAKALARNPGSRGAIGRFTWRHSHPFEWRAQQLMDLGLMEPGQWF"
BASE COUNT          264 a          457 c          467 g          257 t
ORIGIN      
        1 caatgcgcgc tggtcgaaca ggccgaggtg atggaatagt tgaccccctt gatccggaag
       61 ggcgtggcca gcgtggccga attggtggac gacatgcagc gcgtcaccat gaagggcccc
      121 atccgcttgg gactgccctt ttcgatgacg atctggtggg cgtcgaagaa attcgacgtg
      181 gaggggccgc ccgatcccat gatcaggccg gtccgagggt tcgagacgtc gccttcctca
      241 agcccgctat ccttgaccgc ctgttccatg gcgatgaagt tgtaggctgc gcccggaccc
      301 atgaagcgca ggttgcgctt gtcgatgtga tcctccagca cgatctgggg cattccgtgc
      361 acctggctgc gaaagccgtg ttcggcatat tccggggcga agacgatgcc cgagcggccg
      421 atccgcaggc tttccagcac ttcggcggca ttgttgccga tgggcgagac gatcccgagc
      481 ccggtgatga cgacgcgacg catgagagga ttcctctggc taattagctg gtcgacagcg
      541 cgaccttcat atccttgacc tgatagatga cctcgccatc ggcctcgacg cggccatccg
      601 ccacgcccat ggtcagccgg cgggtctgaa ccgccttggt gaaatcgacg aaatagcgca
      661 gcaacttgcg gtcggggcgg accatgccgg tcagcttgac ctcgcccacg ccaagcgcat
      721 agccgcgccc ctcccatccg cgccagccca ggttgaagcc ggtcagttgc cacagcccgt
      781 caaggccaag gcatccgggc atgatcgggt tgccggggaa atggcaggcg aaaaaccaga
      841 gatcggggtc gatgtcgaat tcggcgacga catgcccctt gccatgcgcg ccgcgatctt
      901 ccgagacatc ggtgatccgg tccatcatca gcatcggcgg ttcgggcaat tgcgcattgc
      961 cggacccgaa caattcgcct cgggcgcagg ccagcaggtc gttccggtcg aaactggttt
     1021 gcgtcatcgc catgcggtcc tgccttccct tcggcgcgat cgggcgccgt ccctctcaag
     1081 ttgacgcacc gtctatcact cgccgcgaag ccggtgcaag tccaagccat gaaacagccg
     1141 gcgaggccgc gcaagcctca gaaccattgg ccgggctcca tcaggcccag atccatcaat
     1201 tgctgcgccc gccattcgaa gggatgggaa tggcgccagg tgaaccggcc gatcgcgccg
     1261 cgcgatccgg gattgcgcgc cagcgccttg gcgacccgga aagaggcgat ggtcgcggtc
     1321 aggttgtggt gccagggaca tgaataggtg ttgtattccg cgatgttgaa gcggtgatcg
     1381 ggcgtgatcg tcaggcccgg cgcggcgcgg aacagcgcaa cccggtcgat ccgccgccgg
     1441 tccgg
//
LOCUS       DTVW01001031            4109 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2264961, whole
            genome shotgun sequence.
ACCESSION   DTVW01001031 DTVW01000000
VERSION     DTVW01001031.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 4109)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4109)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4109
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2264961"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..332)
                     /locus_tag="EYO87_13490"
     CDS             complement(<1..332)
                     /locus_tag="EYO87_13490"
                     /inference="COORDINATES: protein motif:HMM:PF06808.10"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HIC66986.1"
                     /translation="MAASLGPILLLLALVLLWLRVPLALALLAISVPGLLLMPAGGAL
                     PSAIASLFSSLDGLLHSPGLLLVPLVVLLGNLALYAGISTRIYDASAVWLRSLPGGPA
                     LAAVLGCGG"
     gene            655..2076
                     /locus_tag="EYO87_13495"
     CDS             655..2076
                     /locus_tag="EYO87_13495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein L,D-transpeptidase"
                     /protein_id="HIC66987.1"
                     /translation="MEFCRETHDAGETRSPETLMPRRLALSTFFGLSLLAASAIPAAA
                     QTSAATQDRDVPFTAEQMEIAAYDGGDLPRGRSALTAKVQLLLDRSGTSPGVIDGYKG
                     AMSESAIRAFERRVGLPEDGLMDPHVWNLLQSYSEIPLTQTYTITQEDAEGLVDDIPS
                     DFAEKAKMSTQGYTSIAEKLGERFHMDEKFISFLNPGVPMVPGSTIKVANPAANMSKK
                     VARIFIDKATRRVAAYDEAGRMIVDYPATIGSDATPSPSGKHRVTSVAINPNYTYNPS
                     KNFKQGNNDKALIIPPGPNGPVGSVWIDLSKPTYGIHGTPTPSQLFRNQSRGCVRLTN
                     WDAQELARLVIPGVTTVEFLDPGVTIADVTGEGAQPAATRDAMLETASAAAAEAVTQT
                     NTVSDTLPAPATVTTKPAAPLSLPETGGGATPAPPKVYENTSEETADAAASLAPQRGD
                     PLSHALSGALPDAFVVPPLEGEN"
     gene            2073..2927
                     /locus_tag="EYO87_13500"
     CDS             2073..2927
                     /locus_tag="EYO87_13500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extensin family protein"
                     /protein_id="HIC66988.1"
                     /translation="MRGPTPVLTLLALLLAGPAVAQERPPGAGPVRAQSALTGIRPPE
                     RPAEEAKASEETTASPPKPEQAGVPETEEAAAPPAEAFGPPAPPAWYAARESDEDFAA
                     CRLALAMLGTVYENRPAVTNPDNPDCGIARPIRVQRILPDLILEGGAEMRCDTARALG
                     LWARDFARPAAATLPGAPRLTGLRLGSTYACRARVGTGQARPKLSEHALGNAIDISAF
                     LFEGAGTLPVQPRRDSGDQAEAFQRTVRGAACLFFTTVLGPGVNKAHAEHLHFDIAAR
                     RGDWRLCQ"
     gene            complement(2932..3663)
                     /locus_tag="EYO87_13505"
     CDS             complement(2932..3663)
                     /locus_tag="EYO87_13505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HIC66989.1"
                     /translation="MAITEYFIRYLQRRDSLSEADLQRLRALKTEQASYGPGDVIVPF
                     DRTESRSCMMLRGLSARSHKLVGRPDDRVITALHVPGDFVDLHGFVLAGLEHAVIAVG
                     SAEVEFIGHDQLTEITENFPHLTRLLWMATLIDAAVHRQWLVAAASLRSSAHLAHLLC
                     EIYTRLNVVGAAANGQFSLPLLQRELADILGYSPIHVNRAVRDLRDRGLLRWSGADVT
                     ILDWRGLATLARFDATYLDLERRNR"
     gene            complement(3777..>4109)
                     /gene="fliI"
                     /locus_tag="EYO87_13510"
     CDS             complement(3777..>4109)
                     /gene="fliI"
                     /locus_tag="EYO87_13510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748396.1"
                     /note="involved in type III protein export during
                     flagellum assembly; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellum-specific ATP synthase FliI"
                     /protein_id="HIC66990.1"
                     /translation="DRAIAERGRFPAVDVVRSVSRSLPDAATPEENAMIAKARGAMGA
                     YAESELMIRAGLYAPGSDPRLDEAVRLYPQLDDFVALSGNSIAQSFERLSEALRLPQA
                     ARPARRAG"
BASE COUNT          790 a         1396 c         1288 g          635 t
ORIGIN      
        1 ccgccgcaac ccagcacggc ggccagcgcc gggccacccg gcagcgatct cagccagacg
       61 gcggaggcat cgtagattcg cgtgctgatt ccggcataga gcgcaagatt gccaagcagg
      121 acgaccagcg gcaccaggag cagcccgggc gaatggagca ggccgtcaag cgaggaaaac
      181 agcgacgcaa tcgcactggg caacgccccg cccgccggca tcagcaaaag ccccggcacc
      241 gatatcgcca acaacgccaa ggccagcggc acccgcaacc aaagcagcac cagcgcaagc
      301 aacagcagga tcggcccgag gcttgcagcc atggcctaga ccgttccttt gccgcagcga
      361 tcgtcgatcg tcgcggtctc gcgcaatgtc gccggattcc gcgaaagcgg gcatcgtctt
      421 cggggcgcgg ccatcggaac gtccggcgcg aggggcctga gcgacctcat cgcggcggtc
      481 gcgcccgatc ttgcgggttg ccgcaactgg agatcctcat ccggccccct ttcccggtcc
      541 gtccttcatg cgaaacctcg ctgaattctt gccgcttgac cagagcggga agggccgttt
      601 cacaggcgcc gcgcccgggg gcggcatttg aacgaaacgt gacccccgca gtctatggag
      661 ttttgccgag aaacacacga tgctggcgaa acacgatcac cggagaccct gatgccgcgc
      721 cgccttgccc tttcgacatt tttcggactg tcgcttcttg cggcctcggc gatccctgcg
      781 gcagcccaga ccagcgccgc gacgcaggat cgcgatgtgc ccttcaccgc agagcagatg
      841 gagattgcgg cctatgatgg cggcgatctt ccgcgcggcc gttcggcgct gacagccaag
      901 gtgcagcttc tgctggatcg ctcgggcacg tcgccgggcg tcatcgacgg ctacaagggc
      961 gcgatgagcg aaagcgccat ccgcgccttc gaacgccgcg tcggcctgcc cgaggacggg
     1021 ctgatggatc cgcatgtctg gaacctgctg caatcctatt ccgaaattcc gttgacgcag
     1081 acctacacca tcacccaaga ggacgccgaa gggctggtcg acgacatccc gtccgatttc
     1141 gccgaaaagg ccaagatgtc cacgcagggc tataccagca ttgccgaaaa gctgggcgaa
     1201 cgtttccaca tggacgaaaa gttcatctcc ttcctcaatc cgggcgttcc gatggtgcct
     1261 ggatcgacga tcaaggtcgc caacccggct gccaacatga gcaagaaggt ggcccgcatc
     1321 ttcatcgaca aggcgacgcg acgcgtggcc gcctatgacg aagcgggcag gatgatcgtc
     1381 gattatccgg cgaccatcgg ctcggacgcg acaccctcgc cctcgggcaa gcaccgtgtc
     1441 acgtcggtcg cgataaatcc gaactatacc tacaacccgt cgaagaattt caagcagggc
     1501 aacaacgaca aggcgctgat cataccgccg ggcccgaacg ggcccgtggg atcggtctgg
     1561 atcgatctgt ccaagccgac ctacggcatc cacggcacgc cgaccccttc gcaattgttc
     1621 aggaaccagt cgcgcggctg cgtgcggctg acgaactggg acgcacagga actggcaagg
     1681 ctggtcatac ccggcgtgac cacggtcgag ttcctcgatc cgggcgtgac gatcgcggat
     1741 gtcacgggcg aaggggcgca gccggccgca accagggacg cgatgctgga aacggccagt
     1801 gccgcggctg ccgaagccgt gacgcagaca aacaccgtgt ccgacaccct gcccgcgccg
     1861 gcgacggtca cgacgaaacc cgcagcaccc ctttccctgc ccgaaaccgg tggcggggcc
     1921 acacccgcgc ccccgaaggt ctatgaaaac accagcgagg aaaccgccga cgcggcggcg
     1981 tcgctggcgc ctcagcgcgg tgatccgctg agccatgccc tgtcgggcgc cttgccggac
     2041 gccttcgtcg tgccgccgct ggaaggcgag aattgagggg gccgaccccg gttctgaccc
     2101 tgctggcctt gctgctggcc gggccggccg tggcgcagga acggccaccg ggcgccggcc
     2161 ccgtcagggc gcagtccgcg ctgacaggca tccgcccgcc ggaacgaccc gccgaggaag
     2221 ccaaggcatc cgaggaaacc acggcgtcgc cccccaagcc ggagcaggcc ggcgttcccg
     2281 aaaccgaaga agcggcggcc ccgccggccg aggccttcgg tccgccagca ccgcccgcat
     2341 ggtacgcggc gcgtgaaagc gacgaggatt tcgccgcctg ccgactggct ctggcgatgc
     2401 tgggcacggt ttacgaaaac cggcccgccg tgacgaatcc ggacaatccc gattgcggca
     2461 tcgcccggcc gatccgggtt cagcgcatcc tgccggacct gatactcgag ggcggcgcgg
     2521 agatgcgatg cgacaccgcg cgggcacttg gtctatgggc gcgggatttc gcgcggccgg
     2581 cggcagcgac cctgcccggc gcaccccgtc tgacggggct gcggcttggc agcacctatg
     2641 cctgtcgcgc ccgtgtcggc acgggtcagg cccgcccgaa actgtccgaa cacgcgcttg
     2701 gaaatgccat cgacatctcg gctttcctgt tcgaaggggc cgggacgctg ccggttcagc
     2761 cccgacggga cagcggcgac caggcggagg cgtttcagcg aacggttcgg ggtgcggcct
     2821 gcctgttctt caccactgtc ctgggtccgg gcgtgaacaa ggcccatgcc gaacacctgc
     2881 atttcgacat tgccgcgcga cgcggagact ggcgcctgtg tcagtaaagg ctcagcggtt
     2941 gcgccgttcc agatccagat aggtcgcatc gaaacgcgcc agtgtcgcca gtccgcgcca
     3001 atccagaatg gtcacgtcgg cgccggacca gcgcaacagc ccccgatctc tcagatcgcg
     3061 gaccgcccgg ttcacatgga tcggggaata gccaaggatg tctgcaagtt cgcgttgcag
     3121 cagcggcagg gaaaattgcc cgttcgccgc cgcgccgacc acattcaggc gcgtgtagat
     3181 ctcgcacaag agatgtgcca gatgcgcgct ggatcgcagc gaggccgccg cgaccagcca
     3241 ttgccggtgc acagccgcgt cgatcagcgt cgccatccat aagagccgtg tcagatgcgg
     3301 aaaattctct gttatttcag taagttgatc gtgacctatg aattcgacct cggccgaacc
     3361 gacagcgatc acggcatgtt ccagcccagc cagaacgaac ccgtgaagat caacgaaatc
     3421 gccgggcaca tgcaaggccg tgatcacccg atcgtcgggc cggccgacca gcttgtgtga
     3481 tcgggcggac aggccgcgca gcatcatgca actgcggctc tcggtccggt cgaaaggcac
     3541 gatcacgtcg cccggaccat agctggcctg ctcggtcttc aaggcgcgaa gtcgctgaag
     3601 gtcggcctcg gaaagactgt cacgccgttg aagatagcgg ataaaatact cggtaatcgc
     3661 catccgcccc ttcctttcgc gcaactgccg gacagttgca aatcagcccg accggcgcaa
     3721 tggtcggggg gcttagtgta acattcatta agtaattgcc gagacttcct attccttcat
     3781 cccgcccgtc ttgccggacg ggcggcctgt ggcaggcgca gagcctcgga caggcgctcg
     3841 aagctctgcg cgatgctgtt tcccgacaag gccacgaaat catcgagttg cggataaagc
     3901 ctgaccgcct catccagtcg cggatccgac cccggcgcat agaggcccgc gcgaatcatc
     3961 agttctgatt ccgcataagc gcccatcgcc ccgcgcgcct tggcgatcat cgcgttttcc
     4021 tcgggcgtgg ctgcgtcggg caaggaccgc gataccgacc ggaccacatc cactgccggg
     4081 aatcttccgc gctcggcgat tgcgcggtc
//
LOCUS       DTVW01001032            1794 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2265109, whole
            genome shotgun sequence.
ACCESSION   DTVW01001032 DTVW01000000
VERSION     DTVW01001032.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1794)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1794)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1794
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2265109"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            48..191
                     /locus_tag="EYO87_13515"
                     /pseudo
     CDS             48..191
                     /locus_tag="EYO87_13515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012176834.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
     gene            289..>1794
                     /locus_tag="EYO87_13520"
     CDS             289..>1794
                     /locus_tag="EYO87_13520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIC66991.1"
                     /translation="MLFRRFWSDYLYVHRGRMLAAFALMTIEGSTLALISWMLKPLFD
                     RVFIGKETGAIWWVGTAIFAIFLTRAITLVSSRALLSRISLDISTLMQTNLLAHILTL
                     DGRFFRENAPGAMIERIQGDTQAVQGIWATLLTGATRDAISLVMLFGVTLTIDPVWTL
                     AALIGAPILIAPAAVVQRYIRRKMRQNRVSASARATRLDEILHGIASIRLNRAEADQT
                     RRFSTIVRRIRQEQVKLAATSSVIPALTDIVTGIGFVAVLLLGGKEVMEGSRSVGDFM
                     SFFTALALAFQPMRRLGGLAGSWQTAAASLERVYQVFDTRPTVVSGTRTAPPDDCDIR
                     LSDVWLSYDGQMILHGLSFAAEAGRTTALVGPSGAGKSTVFNLLTRMVDSDRGEVLLG
                     GVPVADYDLGVLRDQFSTVSQEAALFDESLRDNMLMGRPDASEDDLRRAMDAAHVTDF
                     VDAEKRGLDSAAGPRGSSLSGGQRQRIAIARAVLRDAPILLLDEATSALDTA"
BASE COUNT          264 a          577 c          633 g          320 t
ORIGIN      
        1 cgtgtgggca gcagagcatg cggagtatgg cgatgtggct gtgaagttca tcgccggacg
       61 gcagcttcgc cacctatacc gcggcgggat cggtgcgccg cgcgctgacg gccgccggtt
      121 tcgcggttcg gcgtcagccc ggtttcggca ccaagcggca catgatcgcg gggcggcgcg
      181 tcccggactg atgcgcgcgc gggttgccgc cggggcggct ggcgggataa ggctggggca
      241 cccttgcgaa aggcatccgc ggacgtgagc aagcccgata cgacatccat gttgttccgc
      301 cgcttctggt cggattacct ctatgtccat cgtgggcgga tgctggcggc cttcgcgctg
      361 atgacgatcg agggctcgac gctggcgctg atctcctgga tgctgaagcc gctgttcgac
      421 cgggtcttca tcggcaagga aaccggggcg atctggtggg tcggcacggc gatcttcgcg
      481 atctttctga cccgcgcgat caccctggtc tccagccggg cgctgctgag ccggatctcg
      541 ctggacatct cgacgctgat gcagaccaac ctgctggccc atatcctgac gctggacggc
      601 cgttttttcc gcgagaacgc gccgggcgcg atgatcgaac gaatccaggg cgacacgcag
      661 gccgttcagg gcatctgggc cacgctgctg accggggcca cgcgggacgc gatctcgctg
      721 gtgatgctgt tcggcgtcac cttgaccatc gatccggtct ggaccctggc cgcgctgatc
      781 ggcgcgccga tcctgatcgc gccggcggcc gtcgtgcaac gctatatccg ccgcaagatg
      841 cgccagaatc gcgtcagcgc cagcgcgcgc gcgacccggc tggacgagat cctgcatggc
      901 atcgcctcga tccggctgaa ccgggccgag gccgaccaga cccgacgctt ttccacgatc
      961 gtccgccgca tccggcaaga gcaggtcaag ctggccgcga cctccagcgt gatcccggcg
     1021 ctgaccgata ttgtcaccgg catcggcttc gtcgccgtgc tgttgctggg cggcaaggag
     1081 gtgatggagg gaagccgcag cgtcggcgat ttcatgtcct tcttcaccgc gcttgcgctg
     1141 gccttccagc cgatgcgtcg gctgggcggg ctggccggaa gctggcagac ggcggcggcc
     1201 agcctggaac gggtctatca ggtctttgac accaggccga cggttgtgtc gggcacgcgg
     1261 accgcgccgc ccgatgactg cgacatccgg ctgtcggatg tctggctgtc ctatgacggg
     1321 cagatgatcc tgcacggatt gtccttcgcg gccgaggcgg ggcgaacgac ggcgctggtc
     1381 ggtccttcgg gggcgggcaa atcgacggtg ttcaaccttc tgacacggat ggtcgattcc
     1441 gaccgcggcg aggtgctgct gggcggtgtg ccggttgcgg attacgacct gggcgtgctg
     1501 cgcgaccagt tctcgacggt ttcgcaagag gcggcgctgt tcgacgaaag cctgcgcgac
     1561 aacatgctga tgggccggcc cgatgcgtcc gaggacgatc ttcgccgtgc gatggatgca
     1621 gcccatgtca ccgatttcgt cgatgccgaa aagcgcggac tggacagcgc cgcggggcca
     1681 agggggtcgt cgctgtcggg tggccagcgt cagcgcatcg ccattgcccg cgccgtcctg
     1741 cgcgacgccc cgatcctgct tctggacgag gcgaccagcg cgctggacac cgcc
//
LOCUS       DTVW01001033            1655 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2265187, whole
            genome shotgun sequence.
ACCESSION   DTVW01001033 DTVW01000000
VERSION     DTVW01001033.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1655)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1655)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1655
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2265187"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..730)
                     /locus_tag="EYO87_13525"
     CDS             complement(<1..730)
                     /locus_tag="EYO87_13525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010396139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HIC66992.1"
                     /translation="MNPVRWIGRQALGLTRAIGSLALFVARGLFRLRPFYARLFAAQM
                     LQIGWLSLPVVGLTALFTGAALALQIHSGGARFQAGDVVPAIVAIGMVRELGPVLGGL
                     MVAARVASSIAAEIGTMRVTEQIDALVTLSTDPIRWLVTPRLWAAILTVPVLVAVGDS
                     IGIMGGWLVGTQSMGFNSTAYLSNSWAYLERWDVLSGLIKGAAFGLIVAASGCWFGMR
                     SGRGAEGVGRATKSAVVAAAVGILA"
     gene            complement(727..>1655)
                     /gene="alr"
                     /locus_tag="EYO87_13530"
     CDS             complement(727..>1655)
                     /gene="alr"
                     /locus_tag="EYO87_13530"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011749925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HIC66993.1"
                     /translation="KADAYGLGAGRVVPALHAAGCRDFFVALASEGRAIRPHLPPDAT
                     INVLSGHMEGADLDGLVPVLNSAEQFFRDRTMRPGKPFAIQLDSGMNRLGMEAAEWAA
                     IRAEALAAGPAFIMSHLACADEPDHPANAAQLAAFRAMTDGCGVPRSLAATGGILLGP
                     DYHFDLIRPGVGLYGGMPFAEARQVARLSLRVIQTRPVEAGEYVGYGATWTASGPRRI
                     ATVDAGYGDGILRALSGSGASLYAGGVACPIVGRVSMDLITADVTALATVPDALDLIC
                     PEQTVDRLADFAGTIGYEILTALRQRYVRTYL"
BASE COUNT          293 a          599 c          560 g          203 t
ORIGIN      
        1 ccgcaaggat gccgacggcg gcggcgacga cggcggattt ggtggcccgg ccgacgccct
       61 cggccccgcg cccggaccgc attccgaacc agcagccgct ggccgccacg atcagcccga
      121 aggcggcgcc cttgatcagc cccgacagca cgtcccagcg ttccaggtag gcccagctat
      181 tggacagata ggcggtcgaa ttgaagccca tcgattgcgt tccgaccagc cagccgccca
      241 tgatgccgat gctgtcgccc accgccacca gaaccggaac ggtcaggatc gcggcccaga
      301 gccgcggcgt caccagccag cggatcggat cggtggacag cgtgaccagc gcgtcgatct
      361 gctcggtcac gcgcatggtg ccgatctcgg cggcgatgga actggcgacg cgggcggcga
      421 ccatcagccc gcccaggacg gggccaagtt cgcgcaccat gccgatggca acgatggccg
      481 ggaccacgtc gcccgcctgg aaacgcgccc cgccggaatg gatctgcagc gccagcgccg
      541 cgccggtgaa cagggccgtc aggcccacga ccggcagcga cagccagccg atctgaagca
      601 tctgggcggc aaacaggcgg gcgtagaagg ggcgcaggcg gaacaggccg cgcgcgacga
      661 acagggccag cgatccgatg gcgcgggtca ggcccagggc ctgccgtccg atccagcgga
      721 ccgggttcac agataggtcc ggacatagcg ttggcgcagc gcggtcagga tctcgtatcc
      781 gatcgtgccg gcgaaatccg caagccggtc aacggtctgt tcggggcaga tcagatccag
      841 cgcgtcgggc accgtggcca gcgccgtcac atcggccgtg atcagatcca tcgagacacg
      901 gccgacgatg ggacacgcca cgccaccggc atagaggctt gccccgctgc ccgacagcgc
      961 ccgcaggatg ccatcgccgt agccggcatc gaccgtcgcg atccggcgcg ggccgctggc
     1021 ggtccaggtc gcgccgtagc ccacatattc gcccgcctcg accggccgcg tctggatcac
     1081 ccgcagcgac agccgcgcaa cctgacgggc ctccgcgaaa ggcatcccgc catacagtcc
     1141 gacaccgggt cggatcaggt cgaaatggta atccggcccc agcaggatgc cccccgtcgc
     1201 cgccagcgac cgcggcacgc cgcagccatc ggtcatcgcg cggaaggcgg caagctgggc
     1261 ggcattggcg ggatgatccg gctcgtcggc gcaggccaga tgcgacatga tgaaggcggg
     1321 cccggcggcc agcgcctcgg cccggatcgc cgcccattcg gcggcttcca tgcccagccg
     1381 gttcatgccg ctgtccagct ggatcgcgaa gggcttgccc ggtcgcatgg tcctgtcgcg
     1441 aaagaactgc tcggcgctgt tcagcaccgg aaccagcccg tctagatcgg cgccttccat
     1501 gtgaccggac aggacgttga tcgtcgcatc cgggggcaga tgcggccgga tcgcccgtcc
     1561 ctcggacgcc agggccacga agaagtcgcg acagcccgca gcatgaagcg caggcaccac
     1621 ccgtcccgcg cccagcccgt aggcatcggc cttga
//
LOCUS       DTVW01001034            1198 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2267799, whole
            genome shotgun sequence.
ACCESSION   DTVW01001034 DTVW01000000
VERSION     DTVW01001034.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1198)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1198)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1198
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2267799"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..436
                     /locus_tag="EYO87_13535"
     CDS             <1..436
                     /locus_tag="EYO87_13535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HIC66994.1"
                     /translation="QLHLAGHDDYLRAHPPIAELADLHRHRLIGYIPDMIFDRELDYL
                     SETGADSAAITSNSVSVQMQAIRAGAGLGIVHDFALPFAPGVRIVLPQRIALRRSFWL
                     IRHADDRRSRRLTRLAEMLSQGLRAEVARLEARLPADRDRRA"
     gene            495..956
                     /locus_tag="EYO87_13540"
     CDS             495..956
                     /locus_tag="EYO87_13540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010398012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HIC66995.1"
                     /translation="MLVRQLLSMKSDSGKAGIEAGTIITIKPEATLAEAVKLLADQRI
                     GAVVVSSDGRTPEGILSERDVVRQLGAHGSGVLDTPLGKVMTRAVQTCTTGEDALTIL
                     ERMTQGRFRHLPVVDDSGHMLGLISIGDAVSGRLKELAAEKDALTGMIMGS"
     gene            1042..>1198
                     /locus_tag="EYO87_13545"
     CDS             1042..>1198
                     /locus_tag="EYO87_13545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_353022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantetheine-phosphate adenylyltransferase"
                     /protein_id="HIC66996.1"
                     /translation="MRIGLYPGTFDPITLGHVDIIQRAMALVDRLVIGVAINRDKAPL
                     FDLQARVD"
BASE COUNT          216 a          365 c          398 g          219 t
ORIGIN      
        1 ccaactgcac ctggccggac atgatgatta cctgcgcgcc catccgccga tcgccgaact
       61 tgccgatctg caccggcatc gcctgatcgg ctacatcccc gacatgatct tcgaccgcga
      121 actggattac ctttccgaga cgggggccga cagtgccgcg atcacctcga attcggtttc
      181 ggttcaaatg caggcgatcc gggccggcgc gggacttggc atcgttcacg atttcgcgct
      241 gcccttcgcg ccgggcgtcc gcatcgtgct gccacagcgc atcgcgctgc ggcgcagctt
      301 ctggctgatc cgccacgcgg acgatcgccg gtcgcgccgc ctgacgcgcc ttgccgagat
      361 gctgtcccag ggattgcgtg ccgaagtggc gcggctggag gcgcggcttc ccgcggaccg
      421 cgatcgtcgg gcttgacgca gggcccggtg aggcgaaaga tgaaatcaac cacgcggtga
      481 gaaggggatt tgcgatgctg gtcagacaat tgctgtcgat gaaaagcgat tccggcaagg
      541 ccgggatcga ggccggaacg atcatcacca tcaagcccga ggcgactttg gcggaagccg
      601 tgaagcttct ggccgaccag cgcatcggcg cggtggtcgt gtccagcgat ggccgcacac
      661 cggaaggcat cctgtccgaa cgcgacgtgg tgcggcaatt gggcgcgcac gggtccggcg
      721 ttctggacac gccgctgggc aaggtgatga cccgcgccgt ccagacctgc accacgggcg
      781 aagacgcgct gaccatcctt gaacgcatga cccaggggcg gtttcgccat ttgccggtgg
      841 tggacgattc cggacacatg ctggggctca tttcgatcgg cgatgcggtc agcggccgcc
      901 tgaaggaact ggcggcggaa aaggacgcgc tgaccggcat gatcatgggc agctgacgcg
      961 ccgcgaaatt ctggcaaata cttgcctttc ggtgaaaaat gggctttggc tgacggctat
     1021 cttcaacggg gacagcggat gatgcgcata ggcctttatc ccggtacatt cgatccgatc
     1081 acgcttggcc atgtcgatat catccagcgt gcgatggctc tggtcgatcg gctggtgatc
     1141 ggggtggcga tcaaccgcga caaggcgccg ttgttcgatc tgcaagcgcg ggtcgata
//
LOCUS       DTVW01001035            2575 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2268903, whole
            genome shotgun sequence.
ACCESSION   DTVW01001035 DTVW01000000
VERSION     DTVW01001035.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2575)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2575)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2575
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2268903"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..654)
                     /locus_tag="EYO87_13550"
     CDS             complement(<1..654)
                     /locus_tag="EYO87_13550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010397268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl transferase"
                     /protein_id="HIC66997.1"
                     /translation="MMPGSVRLGVVLLCHADLDIAARMARIWAEGGAQVCIHIDANVR
                     DRHVELMRVALADLKRVAFSARRHRCKWGAFSLVRATQDTAAQLLADHPDLTHVYLAS
                     GACLPLRPVRDLIAFLASDPERDHIESVSAWDVGWTVGGLNEERFTLYFPFDWRRRRW
                     LFDRCVAWQRRRGIHRRLPPGLSPHLGSQWWCLTATTLRAILDDPDRSRHDRFFRYSW
                     "
     gene            complement(651..1679)
                     /locus_tag="EYO87_13555"
     CDS             complement(651..1679)
                     /locus_tag="EYO87_13555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HIC66998.1"
                     /translation="MKSISRLPIPDRLRRRAERQLLIARAFGRRRVLRVDADRTPLIN
                     RHDILAFVTLRNERVRLPYFLDYYRDLGVQHFLMVDNGSSDGSADYLRRQDDVSLWRT
                     NAGYKKARFGMDWLGWLLMRYGNGHWCLTVDPDEFLVYPHCDTRPLSALTSWLDSIGR
                     RAFPAMLLDMYPSGGIEDQPYREGQNPFEIARFFDPANYAISKNDYFGNLWIQGGPRM
                     RAFFPQNPLAGPALNKIPLVRWYWRYAYVSSTHMLLPRRLNQVFDEEGGEMESGVLLH
                     AKFLSTLVEKSAEELDRHQHYANSQEYRAYNAGIERGLRLWCEESREYGDWRQLEDLG
                     LISRGNWA"
     gene            complement(1676..>2575)
                     /locus_tag="EYO87_13560"
     CDS             complement(1676..>2575)
                     /locus_tag="EYO87_13560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HIC66999.1"
                     /translation="FLIVDNDSDDGSAEFLRIQGDVSLWRARGSYREARFGLDWVNAL
                     LFRHGRGHWCVTADADEFLIYPDWEERDLHALTAHLDANGIEAMGALMLDLYPQGALG
                     RADAPEDAPLWLRLPYFDGGPYRCRTIQPRRNRWVQGGARERAFFATDPARSPTLNKL
                     PLVRWRAGRVYVNSTHSMLPPRLNDAWDGPGDPRLSGVLLHGKFLPDILARSAEELTR
                     RQHFRDPHAYAAYHRAITEAPVLWHEGSRRFAGWRQLLDLGLMGAGEWLSGGERPCQT
                     RSEASLQAITDINTRQPGRPNQQ"
BASE COUNT          504 a          848 c          808 g          415 t
ORIGIN      
        1 ccagctatag cggaaaaagc ggtcgtgccg ggaacggtcg ggatcatcca gaatcgcccg
       61 cagcgtcgtc gccgtcagac accaccattg cgaacccaga tgcggcgaca ggccgggggg
      121 caatctgcgg tggatccccc gccgccgctg ccatgcgacg cagcgatcga aaagccagcg
      181 ccggcggcgc cagtcgaacg ggaaatacag ggtgaaacgt tcctcgttca acccgccaac
      241 ggtccagccg acatcccagg cgctgacgct ttcgatatgg tcgcgctccg gatcggacgc
      301 cagaaaggcg atcagatcgc ggaccggtcg cagcggcaga caggcccccg aggccagata
      361 aacatgggtc aggtcgggat gatcggccag caattgcgcc gccgtgtcct gcgtcgcgcg
      421 aaccaggctg aaggcccccc acttgcagcg atgtcgccgg gcggaaaagg cgacgcgctt
      481 cagatcggcc agcgcgacgc gcatcaactc gacatgccga tctcggacat tggcgtcgat
      541 atggatgcag acctgcgcgc cgccttcggc ccagatccgg gccatccgcg cggcgatgtc
      601 cagatcggca tggcacagca gcaccacccc cagcctgacc gatcccggca tcatgcccag
      661 tttccccggc tgatcaggcc cagatcttcg agctggcgcc aatcgccgta ttcgcgcgat
      721 tcctcgcacc acaggcgaag cccccgttcg attccggcat tataggcgcg atactcctgg
      781 gaattggcgt aatgctggtg gcggtcaagc tcttcggcag atttttcgac caacgtggac
      841 aggaacttgg catgcagcag cacgcccgat tccatctcgc cgccctcctc gtcgaaaacc
      901 tggttcaggc ggcgcggcag cagcatgtgg gtcgaactga cataggcata gcgccaatac
      961 catctgacca gcggaatctt gttcagcgcc ggtcctgcca gcgggttctg cggaaaaaag
     1021 gcgcgcatcc gcggaccgcc ctggatccag agattgccga aatagtcgtt cttgctgatg
     1081 gcataattcg ccgggtcgaa gaaacgggcg atctcgaacg ggttctgtcc ttcgcgatac
     1141 ggctgatcct cgattccgcc ggacggatac atgtccagca gcatcgcggg gaatgcgcgg
     1201 cgcccgatcg aatccagcca gcttgtcagc gccgaaagag gccgcgtgtc gcaatgcgga
     1261 tagacaagaa actcgtcggg atcgacggtc aggcaccaat ggccgttgcc gtatcgcatc
     1321 agcagccagc ccagccagtc cattccgaac cgggctttct tgtagccggc attggtgcgc
     1381 cacaacgaca cgtcatcctg acggcgcagg tagtcggcac tgccatccga actgccattg
     1441 tccaccatca ggaaatgctg gacccccagg tcgcgataat aatccagaaa atagggcagc
     1501 cgcacccgtt cgttgcgcag ggtgacgaag gccaggatat cgtgcctgtt gatcagcggc
     1561 gtccggtcgg catcgacccg cagcacgcgg cgccggccaa aagcccgtgc gatcagcaat
     1621 tgccgctcgg ccctgcggcg caggcggtcc ggaatcggca ggcggctgat cgatttcatt
     1681 gctggttcgg gcggcccggt tgtctggtgt tgatgtctgt tattgcttgc aatgatgcct
     1741 cggaccgcgt ttgacaaggc cgttcaccac ccgacagcca ttcgcccgcg cccatcaggc
     1801 ccagatccag caattgccgc catccggcaa agcggcggga tccttcgtgc cagaggaccg
     1861 gagcctcggt gatggcccgg tgataggccg cataggcatg gggatcgcgg aaatgctggc
     1921 ggcgggtcag ttcctcggcc gagcgcgcga ggatatcggg caaaaacttg ccgtgcagca
     1981 acacgcccga caggcgtgga tcgcccggcc cgtcccaggc gtcgttcagc cgcggcggca
     2041 acatggaatg ggtcgagttc acatagaccc gccccgcccg ccagcgcacc agcggcagct
     2101 tgttcagggt cgggctgcgg gcgggatcgg tcgcgaaaaa ggcccgctcg cgcgcgccgc
     2161 cctgcaccca gcggttgcgg cggggctgga tcgtccggca gcgataggga ccgccatcga
     2221 aatagggcag acgcagccac aatggcgcat cctcgggcgc gtcggcccgg cccagggcgc
     2281 cctgcggata cagatccagc atcagcgcgc ccatcgcctc gatgccgttc gcgtccagat
     2341 gcgcggtcag cgcatgcaga tcgcgttctt cccaatcggg atagatcagg aattcgtcgg
     2401 cgtcggcggt cacgcaccaa tggccgcggc cgtggcgaaa cagcaacgca ttcacccagt
     2461 ccagcccgaa gcgcgcctcg cgatagctgc cgcgcgcgcg ccacagagag acatcgccct
     2521 gaatgcgcag gaattcggcc gagccgtcgt cactgtcatt gtccacgatc aggaa
//
LOCUS       DTVW01001036            2235 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2269672, whole
            genome shotgun sequence.
ACCESSION   DTVW01001036 DTVW01000000
VERSION     DTVW01001036.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2235)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2235)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2235
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2269672"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1541)
                     /locus_tag="EYO87_13565"
     CDS             complement(<1..1541)
                     /locus_tag="EYO87_13565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010392201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hybrid sensor histidine kinase/response
                     regulator"
                     /protein_id="HIC67000.1"
                     /translation="MQAEEGMNADLPADLTRSGLNLIGQALSIFDADLRLAVANSQYQ
                     AMFDLPETLTRPGTRFEDTIRFLVERGEYGPQDDPPAAVAFRVEQARTFQPHYFERER
                     ANGRWIAVEGAPLSQGGWVTVYTDITEIRRQESLLRARSEELSEQVLDHAERLSAANR
                     ELAATNAALKEAQRVLTRSEARIRQVTEMVPAHIAHVDADYRYTFSNRQLPQVFPGSD
                     AGIIGRSIEEALGSGSFATLRPRLDRALAGDPQVFEMTHAPSGRRIRIALTPDRAGHG
                     VYVLSTDVSAEVQAREALSHAGKRSLAAQLTSGMAHDFGNLLTIILGLQGRLAARDLP
                     EDAAGDVHATLAAARRGAALLDRLARISGPREVALQPVDLPALLHEVAALARPSLGDG
                     IKLHLDCDLGSQPLLLDPGAVQDSALNLILNANAAIAGPGGRITLSARRSGEWIEIAV
                     ADTGHGFSDEALRRATEPFFTTKAGQGSGLGLSMVYDQTKLMDGTMRLDNTARGALVT
                     LRLPR"
     gene            1732..>2235
                     /locus_tag="EYO87_13570"
     CDS             1732..>2235
                     /locus_tag="EYO87_13570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long-chain fatty acid--CoA ligase"
                     /protein_id="HIC67001.1"
                     /translation="MTDPQTPEGELHSIPALLARNVARYGDRPAWREKEFGIWQSWTW
                     AQAAGEIRALALGLLTLGLRPGDRVAIIGRNRPAHYWGMIAAQMCGAVPVPLYQDAVA
                     DEMAFVLDHCGARFVLCGDQEQVDKVLEVEDRVTGIERILYTDRRGMRRYDHSRMDAL
                     ADVQAEGR"
BASE COUNT          363 a          739 c          780 g          353 t
ORIGIN      
        1 ctgcgtggca ggcgcagggt caccagggcg ccgcgcgcgg tgttgtccag ccgcatggtc
       61 ccgtccatca gcttggtctg gtcatagacc atcgacaggc cgaggcccga cccctgtccg
      121 gccttggtgg taaagaaagg ctcggtcgcg cggcgcaagg cctcgtcgga aaagccgtgg
      181 ccggtatcgg cgaccgcgat ctcgatccat tcgccgctgc gacgggccga cagcgtgatc
      241 cggccgcccg gcccggcaat ggcggcattg gcgttcagga tcaggttcag cgccgaatcc
      301 tgcaccgcgc cgggatccag cagcagcggc tgggatccca ggtcgcaatc cagatgcagc
      361 ttgatcccgt cgcccagcga ggggcgggcc agcgccgcaa cctcgtgcag cagagccggc
      421 agatcgaccg gttgcaatgc cacctcgcgc gggccgctga tccgggccag ccggtccagc
      481 agcgcggcac cgcgacgggc ggcggccagc gtggcatgca catcgcccgc cgcgtcctcg
      541 ggcagatccc gcgccgccag ccgcccctgc aggcccagga tgatggtcag caggttgcca
      601 aaatcatgcg ccatccccga tgtcagttgc gccgcaaggc tgcgcttgcc cgcatggctc
      661 agcgcctcgc gcgcctgcac ctcggcgctg acatcggtcg acaggacata gacgccgtgc
      721 ccggcccgat ccggggtcag cgcgatgcgg atgcggcggc ccgagggcgc atgggtcatc
      781 tcgaagacct gcggatcgcc ggccagggcg cggtccagcc gggggcgaag cgtggcgaag
      841 ctgccgctgc caagcgcttc ttcgatgctg cggccgatga tgccggcatc gctgcccgga
      901 aagacctgcg gcagctgccg gttggaaaag gtatagcggt aatccgcatc cacatgggcg
      961 atatgggccg gcaccatttc cgtcacctgc cggatccgcg cctcgctgcg ggtcaggacg
     1021 cgctgcgcct ctttcagcgc ggcgttggtg gcggccagtt cgcggttggc ggcggacagg
     1081 cgttcggcat gatccagcac ctgttcggac aattcctcgg accgggcgcg cagcagcgat
     1141 tcctgacgcc tgatttcggt gatgtcggta tagaccgtca cccagccgcc ctgcgacagc
     1201 ggcgcgccct cgaccgcgat ccagcggcca ttggcacgct cgcgttcgaa gtaatgcggc
     1261 tggaaggtcc gcgcctgttc gacgcgaaag gccaccgccg ccggcgggtc gtcctgcggg
     1321 ccatattcgc cacgctcgac cagaaaccgg atcgtgtcct cgaaccgggt gccgggccgg
     1381 gtcagggtct cgggcagatc gaacatggcc tgatactggc tattggcgac cgccagccgc
     1441 agatcggcat caaagatcga cagcgcctgc ccgatcaggt tcagccccga ccgcgtcaga
     1501 tcggcgggca ggtccgcgtt catcccttcc tccgcttgca tccgttccac tgaccctcct
     1561 cccccctcag cagcgatagc atcgccccgc gagccatgaa agcgatgtaa catttcgttg
     1621 gattcgtgaa aaattgcggc aagaattggc gatcaggatg gtcgcatccc ggccgtgcgg
     1681 aggaggcgcg cccgggatcg cgcgggcacg gcgccgcgac agggaggaaa gatgacggac
     1741 ccgcagacgc cggagggcga attgcattcg attcccgcgc tgctcgcgcg gaacgtggcc
     1801 cgttacggtg atcgcccggc atggcgcgag aaggaattcg gcatctggca aagctggacc
     1861 tgggcccagg cggccgggga aatccgtgcg ctggcgcttg gcctgctgac gcttgggctg
     1921 cggcctggcg atcgcgtcgc catcatcggg cgcaaccggc ctgcccatta ctgggggatg
     1981 atcgcggcgc agatgtgcgg ggcggtgccg gtgccgctgt atcaggatgc ggtggccgac
     2041 gagatggcct tcgtgctgga tcattgcggc gcgcgtttcg tgctgtgcgg tgatcaggaa
     2101 caggtcgaca aggtcctgga agtcgaggac cgcgtgacgg ggatagagcg gatcctctat
     2161 accgacagac gcgggatgcg acgatacgac cattcgcgca tggatgcgct ggccgatgtg
     2221 caggccgagg ggcgc
//
LOCUS       DTVW01001037            1430 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2270528, whole
            genome shotgun sequence.
ACCESSION   DTVW01001037 DTVW01000000
VERSION     DTVW01001037.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1430)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1430)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1430
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2270528"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..100)
                     /locus_tag="EYO87_13575"
     CDS             complement(<1..100)
                     /locus_tag="EYO87_13575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017977470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin"
                     /protein_id="HIC67002.1"
                     /translation="MSVMSKRAVLYRMVMPTHICPYGLKARDLLRRK"
     gene            complement(429..596)
                     /gene="rpmG"
                     /locus_tag="EYO87_13580"
     CDS             complement(429..596)
                     /gene="rpmG"
                     /locus_tag="EYO87_13580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010233410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HIC67003.1"
                     /translation="MAKPTTVKIKLVSTADTGFFYVTKKNPRTKTEKLSFSKYDPVVR
                     KHVEFKEAKIK"
     gene            772..1107
                     /locus_tag="EYO87_13585"
     CDS             772..1107
                     /locus_tag="EYO87_13585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017977468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67004.1"
                     /translation="MGHQGHINDMALDAVRADLAARIAAIDVKAPYTCARDLKPDINQ
                     IRLIAHRHGLNPAVTVAHFVDSALSRGEHGALVHGWLSMLGDAVACDRQDVRACDTFA
                     AACSVRLAS"
     gene            1132..>1430
                     /locus_tag="EYO87_13590"
     CDS             1132..>1430
                     /locus_tag="EYO87_13590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018250533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67005.1"
                     /translation="MDALMAALVAAALAQVGDRPAWLAAILADRYRAPGLVIAMAAIA
                     LAVAAGLAGAAGGLLTPQLTPEAKQLFLALALVLQGGGALFPAKAPDRLERWRLGA"
BASE COUNT          246 a          466 c          481 g          237 t
ORIGIN      
        1 ctttgcggcg cagcagatcg cgcgccttta gaccataggg acagatgtgg gtcggcatga
       61 ccatgcggta gaggacggcg cgcttcgaca tgaccgacat gtggggacac ggccgtcatg
      121 ccgccagcac cccacataaa ccaagggcgg ccccctcgat tcgagaggac cgcccttagc
      181 ccgtagtgac gcgatacagg gcggccggat cgtccggcca ccacggtccg ctatgccgac
      241 cgaacatgaa cgcaatgtgg ccgaacctag cccccaccat ggcttcgtca caaaaacgca
      301 tagattgccc gcacgtcgct ttccatacgc aggcacgcac gcgaagagcc gccgatgcgc
      361 ggggcaccgg cggctcttcg cgattcgatt cggcaagcaa cgcggggcgg cggcgccccg
      421 gcagcggctt acttgatctt ggcttccttg aactcgacgt gcttgcgcac gacggggtcg
      481 tacttgctga agctcagctt ctcggtcttg gtgcgcgggt tcttcttcgt gacgtagaag
      541 aagccggtgt cggcggtgct gacgagcttg atcttgacgg tagtcggctt ggccatgagc
      601 cctaatcctg aaaacaagga gagcggcagc accaacgccg ccgctcgatc agtcgcggcg
      661 catgggccag acggcgacga aagtcaaccg cggatgcccc catccccatc gttaaccacc
      721 acgttaccgg tgcgggcgca tgaatgccat atgacatgac gggagcggaa catggggcat
      781 caggggcata tcaacgacat ggcgctggac gcggtgcgcg ccgatctggc ggcgcgaatc
      841 gccgcgatcg acgtgaaggc gccttatacc tgcgctcgcg acctgaagcc cgatatcaac
      901 cagatccgcc tgatcgcgca tcgtcatggc ctgaacccag cggtgacggt cgcacatttc
      961 gtcgattcgg cactgtcacg cggcgaacat ggcgctctgg tgcatggctg gctgtcgatg
     1021 ctgggtgacg cggtcgcctg cgaccggcag gatgtgcggg cgtgcgacac atttgcggcg
     1081 gcctgttcgg tgcgcctcgc aagctgaaca ccgacgacgg gacggaacgg catggatgca
     1141 ttgatggcgg cgctggtcgc cgccgcgctg gcacaggtgg gcgaccgccc cgcctggctc
     1201 gccgcgatcc tggccgatcg ctaccgcgca ccgggcctcg tcatcgcaat ggcggccatc
     1261 gcgcttgccg tggccgcggg attggcgggc gcggcgggtg gcctgctcac cccgcagctg
     1321 acgcccgagg cgaagcagct gttcctggcg ctggcgctgg tgttgcaggg cggcggcgcg
     1381 ctgtttccgg ccaaggcccc cgaccggctc gaacgctggc ggctcggcgc
//
LOCUS       DTVW01001038            4442 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2271813, whole
            genome shotgun sequence.
ACCESSION   DTVW01001038 DTVW01000000
VERSION     DTVW01001038.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 4442)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4442)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4442
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2271813"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..3177)
                     /locus_tag="EYO87_13595"
     CDS             complement(<1..3177)
                     /locus_tag="EYO87_13595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008030417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HIC67006.1"
                     /translation="MAERRGFLSIFTRHRTLANLILMVMVVGGLYSAPRIRAQFFPDT
                     VVQEIDVRVQWDGAGPEDVDRSVVAVLEPSLMGVEGVANVTSRAVQGSAEIEIEFEPG
                     WDMARANSDVETAIASAGDLPEGAEDPETVRSSWRDRVADVVISGPVGLDQLSRITDD
                     FSNRLYAAGITRLSITGLAAPETLVEVRMADLVRYDITLEQIAAAVGAAASASPAGDV
                     SSGAARVRTGAETRDPAAVAALALKAQPDGTTLTVGDVADVRQSGMDRNTAYYVGGNP
                     AVIVQVQRSAAGDAIGMQRSVEDIVARMTPALPGGVTMELVRARAELIAARLELLLDN
                     AVLGLGLVLALLFLFLNARTAIWVAAGIPASLAAAVGLMYATGMTLNMISLFALILTL
                     GIIVDDAIVVGEHADYRARKLGEPAVVAAERAAGRMAAPVVSSSLTTIIAFAGLMFIG
                     GHFGELISDIPMTVILVLAASLIECFLVLPSHMAHALTRTARRNWYDRPSKLVNRGLD
                     WFVARLLRPLIRWAMVLRYPVLAATTAMFAWSASALVTGQVPWRFFDAPERGSVAGNF
                     AMLPGATREDTIRVMGLVQDAVDRVGAEYETRYGANPITHAMTMVGGNSGRPLPGADT
                     KDTDLLGAVQLELIEPDVRPYSSFDFVAALQEAMPSDPRLETISFRGFRSGPGGDAIS
                     VRMTGAEAQRLKDAAEALKLRLSGFAEVSALEDSMSYDKDELNLRLTAQGEALGFTTD
                     SLARQLRQRLAGIEAATFPVGTRTGAIRVELPENERQGDFLDRMMMRTLSGQWVPLGD
                     IVTVGTEAGFSVIRRENGERMISVTGDISGDDPARAAQITQALETEIMPQIAAEFGIN
                     YETTGLAEQERDFLGDAVVGFALALTGIYMVLAWIFASWSRPLVVMSVIPFGLVGAVW
                     GHALWSLPLSMFSIVGLIGMSGIIINDSIVLISTIDEYARDRGLRPAIVDAVCDRFRP
                     VLLTTATTVLGLAPLLYERSSQALFLKPTVVTLAYGLGFGMVVVLLVVPAVLGIGEDI
                     GRARTGFRRGLRSPGLRRLSFGLQLRVVD"
     gene            complement(3170..>4442)
                     /locus_tag="EYO87_13600"
     CDS             complement(3170..>4442)
                     /locus_tag="EYO87_13600"
                     /inference="COORDINATES: protein motif:HMM:PF13437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HIC67007.1"
                     /translation="LWQAVASRGEDGGPGRGGGGEQVYSARLLTLIPQQVQPVMRVFG
                     SIDSRRRLELRAGAAGRIVYLDPSLQEGGQVEAGQLLVRIDPSSAQAALDNQIAARDD
                     AEATLRDARRNVQVATDDLAAAERQAELRRAAVDRQESLATRGLGTSADRETAQLAAS
                     SAEQAVIAGRSALASAESAVTAAQNALRRSEIDLSEARRALADTTITAGFSGRVTAVT
                     AVEGGLVSLNEQLAEIIDPDALEAQVPLSLDQFSRLVDEDGRLDGTAAMIVLDGSAGR
                     LTAEAQIDRAAASVAEGASGRVVYARIIRGGATLRPGDFVSVEIAEPALADAAIIPAI
                     AIGADGGVLVADDQGRLTATPVEILRRQGNDVVIRVSDELAGARIVAERAPQLGTGIL
                     VRDSQAEAPSDEPRAPATDQSARNRRGAGNG"
BASE COUNT          749 a         1611 c         1428 g          654 t
ORIGIN      
        1 atctactact cgcagctgga gcccgaagct gaggcggcgc aggccggggc tgcgcagccc
       61 gcgccggaaa cccgtgcggg cgcggccgat atcctcgccg atacccagaa ccgcgggcac
      121 caccagaagc acgacgacca tgccaaagcc aaggccatag gcaagcgtca ccaccgtggg
      181 tttcaggaac agcgcctggg acgaacgctc gtagagcaac ggcgccagac ccagaacggt
      241 cgtcgcggtg gtcagcagga ccggacggaa gcggtcgcag acggcatcga caatggcggg
      301 ccggagacca cgatccctcg catattcgtc gatggtcgag atcaggacga tcgaatcgtt
      361 gatgatgatt cccgacatcc cgatcagacc cacgatcgag aacatcgaca ggggcagcga
      421 ccacagggca tggccccaga ccgcgccgac caatccgaag gggatcaccg acatcaccac
      481 cagcggccgg ctccagctgg caaagatcca ggccagcacc atgtagatcc cggtcagcgc
      541 aagcgcgaaa ccgacgaccg cgtcgcccag gaaatcgcgt tcctgctcgg ccaggcctgt
      601 ggtctcgtaa ttgatgccga attcggccgc gatctgcggc atgatctcgg tttccagcgc
      661 ctgcgtgatc tgcgccgcgc gcgccggatc atcgcccgaa atatcgccgg tgaccgagat
      721 catcctttcg ccgttctcgc gccggatcac ggaaaagccc gcctctgtgc ccaccgtcac
      781 gatatcgccc agcggcaccc actgccccga cagcgtgcgc atcatcatcc ggtccagaaa
      841 atcgccctgg cgttcgttct cgggcagttc cacgcggatt gcgccggtgc gggtgcccac
      901 cggaaaggtc gcggcctcga tgcccgccag gcgctggcgc aattgccgtg ccaggctgtc
      961 ggtcgtgaag cccagggcct cgccctgcgc agtcagccgc aggttcaact cgtccttgtc
     1021 ataggacatg ctgtcttcca gtgccgagac ttcggcaaag cccgacaggc gcagcttcag
     1081 cgcctcggcc gcgtccttca ggcgctgtgc ctccgccccc gtcatgcgga ccgagatcgc
     1141 atccccgccc ggacccgagc ggaagccgcg aaagctgatc gtctccagcc ggggatcgct
     1201 gggcatggcc tcttgcagcg cagccacgaa gtcgaagctg gaatagggcc gcacatccgg
     1261 ctcgatcagt tccagttgca ccgcgcccag cagatccgtg tccttggtgt cggcgccggg
     1321 cagcggacgg ccggaatttc cgccgaccat ggtcatcgca tgggtgatcg ggttggcgcc
     1381 gtatctggtt tcgtattcgg cgccgacgcg atcgaccgcg tcctgtacca gtcccatcac
     1441 ccggatcgta tcctcgcgcg tggcgccggg cagcatggca aagtttcccg ccacgctgcc
     1501 ccgttcgggc gcgtcgaaaa agcgccaagg cacctgcccg gtgaccagcg cgctggccga
     1561 ccaggcgaac atcgccgtcg tcgcggccag aaccggatag cgcagcacca tcgcccagcg
     1621 gatcagcggt cgcagcaggc gagccacgaa ccagtccagc ccgcgattga ccagcttcga
     1681 ggggcggtcg taccagttgc gccgcgccgt gcgggtcagg gcatgggcca tgtggctggg
     1741 caggaccagg aaacattcga tcagggatgc ggccagaacc aggatcaccg tcatcggaat
     1801 atccgagatc agttcgccga aatgaccgcc gatgaacatc agcccggcaa aggcgatgat
     1861 cgtggtcagc gaagacgaca cgaccggcgc ggccattcgc cccgccgcgc gttccgccgc
     1921 gacgaccgcg ggctcgccca gcttgcgggc gcgataatcg gcatgttctc ccaccacgat
     1981 cgcgtcgtcc acgatgatgc ccagcgtcag gatcagcgcg aacaacgaga tcatgttcag
     2041 cgtcatgccg gtcgcataca tcagccccac cgccgccgcc agcgaggccg gaatccccgc
     2101 cgccacccag atcgcggtgc gggcattgag gaacagaaac agcagcgcca gcaccagccc
     2161 aaggcccaga acggcattgt ccagcaacaa ttccagccgt gccgcgatca gttcggcccg
     2221 tgcccgcacc agttccatgg tgacgccgcc gggcagtgcg ggcgtcatcc gggccacgat
     2281 gtcctcgacg ctgcgctgca tcccgatcgc gtcgccggcg gcgctgcgct ggacctgcac
     2341 gatcaccgcc ggattgccgc cgacataata ggccgtgttg cgatccatgc ccgattgccg
     2401 cacatcggcg acatcgccca cggtcagggt cgttccgtcc ggctgggcct tcagcgccag
     2461 ggccgcgacg gcggccggat cgcgcgtctc ggcgccggtg cgcacccgcg cggcgccgga
     2521 cgacacgtcg cccgccgggc ttgccgaggc cgctgcgccg acggctgcgg cgatctgttc
     2581 cagcgtgatg tcgtaccgga ccagatcggc catccgcacc tcgaccagcg tctcgggggc
     2641 ggccagaccc gtgatgctga gccgggtgat cccggcggcg taaaggcggt tgctgaaatc
     2701 gtcggtgatc cgcgacagct ggtccagtcc gaccggtccc gagatcacca catcggcgac
     2761 cctgtcgcgc caggaggatc gcaccgtttc ggggtcttcc gcgccttcgg gcagatcgcc
     2821 ggcgctggca atggcggttt ccacgtcgga attggcgcgc gccatgtccc agcccggttc
     2881 gaactcgatc tcgatctcgg ccgatccctg caccgcgcgc gaggtgacgt tggccacgcc
     2941 ctcgaccccc atcagcgagg gttccagcac cgccaccacg gaacggtcca catcctcggg
     3001 tccggcgccg tcccactgca cccgcacgtc gatttcctga acgacggtat cgggaaagaa
     3061 ctgcgcgcgg atcctgggcg cggaatacag accgccgacc accatcacca tcaggatcag
     3121 attggccagc gtccggtggc gggtgaagat cgacaggaaa ccgcgacgct cagccattgc
     3181 cggccccgcg ccggttccgg gcgctctgat ccgtggcggg tgcccgtggc tcgtcggacg
     3241 gggcctcggc ctggctgtca cggaccagaa tcccggtgcc cagttgcggc gcacgttcgg
     3301 ccacgatccg cgcgcccgcc agctcgtccg agacgcggat caccacgtca tttccctgcc
     3361 gccgcaggat ctcgaccggc gtcgcggtca ggcggccctg atcatcggcg accaggacgc
     3421 cgccatccgc accgatcgcg atggctggga tgatggcggc atcggccagc gcgggttcgg
     3481 cgatctcgac gctgacgaaa tcgcccggac gcaaggtcgc gccgccccgg atgatcctgg
     3541 catagaccac gcggccggac gcaccctccg cgaccgaggc cgccgcgcgg tcgatctgcg
     3601 cctcggccgt cagccgcccg gccgagccgt ccagcacgat catcgccgcc gtcccgtcca
     3661 gcctgccatc ctcgtccaca agccgcgaga actgatccag cgacaggggc acctgcgcct
     3721 ccaatgcgtc cgggtcgatg atctcggcca gttgttcgtt cagactgacc aggccaccct
     3781 cgaccgcggt gacggcggtg acgcggccgg aaaagcccgc ggtgatcgtg gtatcggcca
     3841 gagcgcggcg agcctcggac aggtcgatct cggatcggcg cagcgcgttc tgggccgcgg
     3901 tgaccgcgct ttcggcgctg gccagggcgg agcggcccgc gatcacggcc tgttcggccg
     3961 atgatgccgc cagctgtgcc gtttcgcggt cggcgctggt gccaagcccc cgcgtggcca
     4021 gcgattcctg gcgatcgacc gccgcgcggc gcagttcggc ctgccgctcg gccgccgcca
     4081 gatcatcggt cgcgacctgc acgttgcgac gggcatcgcg caaggtcgcc tcggcgtcgt
     4141 cgcgggcggc gatctggttg tccagcgccg cctgcgccga ggacggatcg atccgcacca
     4201 gcaattgccc ggcctcgacc tgaccgccct cttgcaggct cgggtccaga tagacgatcc
     4261 ggcccgccgc gccggcccgc aattccaggc gcctgcgcga gtcgatgctg ccgaagacgc
     4321 gcatcaccgg ctggacctgt tgcgggatga gggtcagcaa ccgcgccgaa tagacctgtt
     4381 cgccgccgcc gccgcgcccc ggtccaccgt cctcgccgcg cgaggcgacc gcctgccaca
     4441 ac
//
LOCUS       DTVW01001039            2267 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2273862, whole
            genome shotgun sequence.
ACCESSION   DTVW01001039 DTVW01000000
VERSION     DTVW01001039.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2267)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2267)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2267
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2273862"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            43..381
                     /locus_tag="EYO87_13605"
     CDS             43..381
                     /locus_tag="EYO87_13605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67008.1"
                     /translation="MTLKAQATGPKLARGGQLKLKVTVERNPSLAAPVVLSVANLPKG
                     VTAAAATIAADKTEVEITLTAAQDAQQGEVKNLLVKGTATVGKVKHADDAAETIQTVG
                     DAVNFIKGAV"
     gene            572..1045
                     /gene="dps"
                     /locus_tag="EYO87_13610"
                     /gene_synonym="pexB"
     CDS             572..1045
                     /gene="dps"
                     /locus_tag="EYO87_13610"
                     /gene_synonym="pexB"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA starvation/stationary phase protection
                     protein Dps"
                     /protein_id="HIC67009.1"
                     /translation="MAVNLKGLKDNARKTSISELNARLADALALGMAIKQAHWNVKGP
                     NFIAVHELLDTVYANNQEHVDTMAERVQILDGVAVGTAETVSRDATLKPYPTDLTKAQ
                     DHIKAICERMRDHGEKLRAAIGATDDAGDANTADLFTAASRTADKDLWFLESHLE"
     gene            complement(1097..1915)
                     /locus_tag="EYO87_13615"
     CDS             complement(1097..1915)
                     /locus_tag="EYO87_13615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010392405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase family protein"
                     /protein_id="HIC67010.1"
                     /translation="MGFPGVWMTETGSMVYRVVPKCACSSIGQIMFFSDHGRFFDGDI
                     HDATEGIAKWSQEHSQDRISGAVRDHSALTFTCVRNPYGRILSSFFDKIAGIQRNGKR
                     YRGNLVPQLMQRYGVTVGSPEDGFDFDQIASFRRFLLFARDTIRWRRPMDPDIHWSAM
                     SSHISTFIVNGGSYDRIFFTERFDEGMQKVLDGCETPVQVDLAKVPRFNESEGHGPKR
                     AHRISDYFDDLSRHLVWEIYKDDFELFRYDFDDPDNKMPLGEVNLAEIHARLGR"
     gene            2086..>2267
                     /locus_tag="EYO87_13620"
     CDS             2086..>2267
                     /locus_tag="EYO87_13620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010392404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl transferase"
                     /protein_id="HIC67011.1"
                     /translation="MARIAFILLAHKDPAGVIAQARRLSQTGDYVVVHFDRRSPEADY
                     RAIREALKDEPGKMND"
BASE COUNT          459 a          711 c          688 g          409 t
ORIGIN      
        1 acccaaccga tcccctcgat cggactcacg ctgaaagccc ccatgacgct caaagcccag
       61 gccaccgggc cgaaactggc tcgaggcggt cagctgaagc tgaaggtgac cgtcgagaga
      121 aacccgtcgc tggcggctcc cgtggtgctc agcgtggcaa acctgcccaa gggcgtcacc
      181 gccgcggccg cgaccatcgc cgcagacaag actgaggttg aaatcacgct caccgcagca
      241 caagatgctc agcagggtga ggtcaagaac ctgctcgtca agggcaccgc caccgtcggc
      301 aaggtcaagc acgccgacga cgccgccgag accatccaga ccgtcggcga tgcggtgaac
      361 ttcatcaagg gtgcggtctg aaccgcccga tcgccgacac gcggatcttg aacggcgtct
      421 gtcccccggg ggcggcgccg ttttccgttg cgcgtccggc ctggaggcgt tcgcaggccg
      481 gcccgggtgc accgcagcgg gcgtcatgcc tgttttggaa cctccgcgcc ttgccgatgt
      541 tgttcagacg aatgaccgaa aggagccgat catggccgtc aatctgaagg ggctgaaaga
      601 caacgcccgc aagacctcga tctcggaact gaatgcgcgc ctggccgatg cgctggcgct
      661 tggcatggcg atcaagcagg cgcattggaa tgtgaagggt ccgaatttca ttgccgttca
      721 cgaattgctg gacacggtct atgcgaacaa ccaggagcat gtggacacca tggccgagcg
      781 cgtgcagatt ctggacggtg ttgctgtcgg aaccgccgaa acggtgtcca gggacgcgac
      841 gctgaaaccc tatccgaccg acctgaccaa ggcgcaggac catatcaagg cgatctgcga
      901 gcggatgcgc gaccatggtg aaaagctgcg cgccgcgatc ggcgcgaccg acgacgcggg
      961 cgatgccaat acagccgatc tgtttactgc cgcctcgcgc acggccgaca aggatctgtg
     1021 gttcctggaa agccatctgg aataaggccg gcgaacgtca gggcgcgcgc ccgcggggtc
     1081 ggcgcgcgtc ttgccgtcag cggcccagcc tggcgtggat ctcggccaga ttgacctcgc
     1141 ccagcggcat cttgttgtcg gggtcgtcga aatcgtagcg gaacagctcg aaatcgtctt
     1201 tgtagatctc ccagaccaga tggcgtgaca ggtcgtcgaa ataatcgctg atcctgtgcg
     1261 cccttttcgg gccgtggcct tcggattcgt tgaagcgcgg caccttggcc agatcgacct
     1321 gcaccggcgt ttcgcagcca tccagaacct tctgcattcc ctcgtcgaac cgttcggtaa
     1381 agaagatccg gtcatagctg ccgccattca cgatgaaggt cgagatatgc gaagacatcg
     1441 ccgaccagtg gatgtcggga tccatcgggc gccgccagcg gatcgtgtcg cgcgcaaaca
     1501 gaagaaaacg ccgaaagctg gcgatctggt caaagtcgaa cccgtcctcg gggctgccga
     1561 cggtcactcc gtatcgctgc atcagctgcg gcaccagatt gccgcgatag cgtttgccgt
     1621 tgcgctggat gcccgcgatc ttgtcgaaga acgatgacag gatgcggcca tagggattgc
     1681 gcacgcaagt aaatgtcagg gcactgtggt cgcggactgc ccctgaaatg cggtcctggc
     1741 tatgttcctg agaccacttg gcgatgcctt cggttgcatc gtggatatcg ccgtcgaaaa
     1801 atcgcccgtg atcggaaaag aacatgatct ggccgatgct ggaacaggcg catttcggca
     1861 ccacgcgata gaccatgctt ccggtctcgg tcatccagac gccaggaaat cccatcgcgc
     1921 gacactccgt tttctgggcg aaccgcgcga gcccctgccc ggctcgggca ggcggtgctt
     1981 gcccgcgcgc cagaattctt tagacacaga aagcaaatgc cgtggcaagt ttcaactttt
     2041 tcccgttctt tcgaaacctt gcaatcccat cttcttgtct gacccatggc ccggatcgct
     2101 ttcatccttc ttgcccacaa ggatcccgca ggcgttatcg cccaggcccg ccggctgtcg
     2161 cagaccggcg attacgtggt cgttcatttt gaccgtcgca gccccgaggc cgattaccgc
     2221 gccatccgcg aggcgctgaa ggacgaaccg ggcaaaatga acgacca
//
LOCUS       DTVW01001040            1981 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2273884, whole
            genome shotgun sequence.
ACCESSION   DTVW01001040 DTVW01000000
VERSION     DTVW01001040.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1981)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1981)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1981
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2273884"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1019)
                     /gene="trkA"
                     /locus_tag="EYO87_13625"
     CDS             complement(<1..1019)
                     /gene="trkA"
                     /locus_tag="EYO87_13625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Trk system potassium transporter TrkA"
                     /protein_id="HIC67012.1"
                     /translation="MKIIICGAGQVGWQIARHLSGERNDVTVIDNNGELIRRATDALD
                     VQGVTGFASHPDVLDRAGARDADLIIAATHSDEVNMVTCQVAHSVFQVPRKIARLRSG
                     AYLDAIYSDLYRTDHLPIDVVISPEREVAKAALQRLSAPSTFDVETFMSGKIQLLGIV
                     LEEDCPALNTPLRQLNEIFSSLRAIVTGVRRGGRLFTPDPGDQLFAGDQVYIFSHFED
                     VARTLEIFGKPPQKQERVAIIGAGNVGLAVARTLEARPGRIRAKLIEHDRARAEYAAD
                     RLERTIVLNGDGLSAELLEEASVPVADAVLAVTDDDKTNILAAVRAKQAGAKMVISLI
                     NDPTLV"
     gene            complement(1638..>1981)
                     /locus_tag="EYO87_13630"
     CDS             complement(1638..>1981)
                     /locus_tag="EYO87_13630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011750357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="sigma-54-dependent Fis family transcriptional
                     regulator"
                     /protein_id="HIC67013.1"
                     /translation="PGNIRQLRNVIERVLILAEGSGPIQPSELEPQGATPDNSDALSL
                     GPQITAMPLREAREMFEREYLLAQINRFGGNISRTAQFVGMERSALHRKLKSLGVVGG
                     MRAEDEVMTGK"
BASE COUNT          340 a          661 c          608 g          372 t
ORIGIN      
        1 accagcgtcg ggtcgttgat cagcgatatc accatcttcg cgccggcctg cttggcccgg
       61 acggccgcca ggatgttggt cttgtcgtca tcggtcaccg ccagaaccgc gtcggccacg
      121 ggcaccgacg cctcttccag caattccgcc gacagcccgt cgccgttcag cacgatggtc
      181 cgttccagcc ggtcggcagc gtattcggcc cgtgcgcggt catgttcgat cagcttggcg
      241 cggatccggc ccggccgcgc ctcaagcgtc cgggccacgg caagcccgac attgcccgcg
      301 ccgatgatgg cgaccctttc ctgcttctgt ggcggctttc cgaagatttc cagcgtccgc
      361 gcgacatcct cgaaatggct gaagatatag acctgatcgc ccgcgaaaag ctggtcgccc
      421 ggatccggcg tgaacagccg cccgccccgg cggaccccgg tgacgatggc gcgcaggctg
      481 gaaaagatct cgttcaactg gcgcaaaggc gtgttcagcg ccggacaatc ctcttccagg
      541 acaatgccca gaagctggat cttgccgctc atgaaggtct cgacatcgaa ggtcgagggc
      601 gccgacaacc gttgcagcgc ggccttggcg acctcgcgtt cggggctgat gacgacatca
      661 atgggcagat gatcggtgcg gtagagatcg gaatagatcg catccagata ggcacccgaa
      721 cgcagccggg cgatcttgcg cggaacctga aagaccgaat gggcgacctg gcaggtgacc
      781 atgttcacct cgtccgaatg ggtcgcggcg atgatcaggt cggcgtcgcg cgcgccggcg
      841 cgatccagca cgtcgggatg gctggcaaat ccggtgacgc cctggacatc cagcgcatcg
      901 gtcgcgcgcc ggatcagttc gccgttattg tcgatcacgg tgacatcgtt gcgttcgccg
      961 gaaagatgcc gcgcgatctg ccagccgacc tgccctgccc cgcagatgat gatcttcatg
     1021 cccgttcctc aagccgtcgc aaaagcgccg cacacctgcc taagcccgcc gcaggcgcgg
     1081 tgcaaccttc ccttcgccgc cgggcgtggc gtgggcttgc agggtctgca aaatgcaacc
     1141 aaaagttgcc aaaatgtcga gtctttcttg tcttggcctc tctgctgcat taaccatgac
     1201 ttgtctgaga acctgcaacg tgggccgcgt tgcaaagatg ctgacctcgg gacgatccgg
     1261 cggcgaattc agccgcttca gcgcaggcac ccggccgctg acagccgacc ccttgccggg
     1321 ggcaggcgac gaagcggatc gtgttgccga acgccgaaac ggcgttccgg accgagccgc
     1381 ccgacatcga taaggagatg gagaatgcca accttgtccg accacggttt cgtctgctcc
     1441 ctgggacgga catcgcgccg catcatgttt gcttccccag aacgccattt cccgtcgggc
     1501 tgacttgggc gcggtcgatg gcgatgtttg gcagcgtgcc atcgaccgcg tttcctgtcg
     1561 tcgttctttc ccttctcgca gaacagcccg caaaggcccg tcaggcccgc gccgtttctc
     1621 gcgcttgacc gcggcaccta tttgcccgtc atgacctcgt cctcggcgcg cattccgccg
     1681 accacgccca gcgatttcag cttgcggtgc agggcgctgc gctccattcc cacgaattgc
     1741 gcggtgcggc tgatattgcc gccaaagcgg ttgatctggg ccagaagata ttcccgttca
     1801 aacatctcgc gcgcctcgcg cagcggcatg gcggtgatct gcggaccaag gctcagcgcg
     1861 tcgctgttgt cgggcgtagc cccctgcggc tccagttccg agggctggat cggaccgctg
     1921 ccctcggcaa ggatcagaac ccgttcgatg acgttgcgca actggcggat attgcccggc
     1981 c
//
LOCUS       DTVW01001041            1069 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2275888, whole
            genome shotgun sequence.
ACCESSION   DTVW01001041 DTVW01000000
VERSION     DTVW01001041.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1069)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1069)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1069
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2275888"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(2..77)
                     /locus_tag="EYO87_13635"
     tRNA            complement(2..77)
                     /locus_tag="EYO87_13635"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:1.23"
                     /anticodon=(pos:complement(42..44),aa:Val,seq:tac)
     gene            complement(90..686)
                     /locus_tag="EYO87_13640"
     CDS             complement(90..686)
                     /locus_tag="EYO87_13640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HIC67014.1"
                     /translation="MYPDLYLIRHGQSVWNREGRMQGRLDSPLTETGRGQARRLAPLV
                     ASIEGIWLSSPQGRAVETATILFGAGNFATDPRLAEIDVGEFSGRRIEESRRDHPEIF
                     AGHRLAWYDRAPGGEHFAGLAARVSDFLHGLPGPAVIVTHGITLRMLRIVAMARPLCE
                     LGSLPVEQGSMHVIRAGRHQTWRPEGGQQGLAPGGAAG"
     gene            985..1059
                     /locus_tag="EYO87_13645"
     tRNA            985..1059
                     /locus_tag="EYO87_13645"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:1.23"
                     /anticodon=(pos:1017..1019,aa:Asn,seq:gtt)
BASE COUNT          200 a          386 c          301 g          182 t
ORIGIN      
        1 ctggtgggcg gtgaggggtt cgaacccccg acatcctcgg tgtaaacgag acgctctacc
       61 agctgagcta accgccccct gcgcaggttc tatcccgccg cgccgcccgg cgccagcccc
      121 tgctggccgc cttcgggccg ccatgtctgg tgccggcccg cgcggatgac atgcatgctg
      181 ccctgctcca ccggcaggga cccgagttcg caaagcggcc gcgccatcgc cacgatccgc
      241 aacatccgca acgtgatacc atgagtcacg atcactgcgg gcccaggcaa tccgtgaaga
      301 aaatcagaaa cccgtgcggc cagccccgcg aaatgctcgc ctcccggagc ccgatcatac
      361 catgccagcc ggtggcctgc gaagatctct ggatgatcgc gccgcgattc ttcgatcctc
      421 cggcccgaga attcgcccac atcgatctcg gccagacgcg ggtcggttgc gaaattgccg
      481 gcaccgaaga gaatcgtcgc tgtctcgacc gcgcggccct gcgggctgga cagccaaatc
      541 ccctcgatcg acgcaaccag cggcgccagg cggcgcgcct gccccctgcc cgtctcggtc
      601 agcggcgaat ccagcctgcc ctgcatccgt ccctcgcggt tccagaccga ttgaccgtgt
      661 cggatcagat atagatcggg atacatcgaa ccggacctct catcgcttgc tcggtgcccg
      721 ctgcgcgagg gctgactggg tccagccctt ggcccacccc agggtgaacg ggcccgcacg
      781 ggcgtccata tcacccgacg cgtcaagcaa ccctctattc cacaggcttc cggaagggcg
      841 caattgtccg agtgcaaata ccgtggcgat tcacgagcac cggaagccgc atcctgccag
      901 acgctcacgc tgccgagatc ccatcaaaaa acttcgcaaa tcctctggac gccttcgtgg
      961 accattgcta tacggccccc gtgttccggc gtagctcagc ggtagagcag ttgactgtta
     1021 atcaattggt cgtaggttcg atccctaccg ccggagccaa aatctccta
//
LOCUS       DTVW01001042            4643 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2276555, whole
            genome shotgun sequence.
ACCESSION   DTVW01001042 DTVW01000000
VERSION     DTVW01001042.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 4643)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4643)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4643
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2276555"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1005
                     /locus_tag="EYO87_13650"
     CDS             <1..1005
                     /locus_tag="EYO87_13650"
                     /inference="COORDINATES: protein motif:HMM:PF07690.14"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HIC67015.1"
                     /translation="TGPLLGGALITADLWGLDWRPIFLVNLPVGALVMVLGGRLIPAL
                     DPDRHMSIDWPGVGLFGLTITMIVLPVIEGALLGWPWWCIALLAGALPMAALFVWRQL
                     RLARSGRTQLLPVALMRNKGYLSGLLMVLLHFSAIPGMFLVLAIYFQTGFGLDPFQSG
                     LATAPFPLGVMTGSFITGRFGARGLAVRMGVGALVLLIGMAFLRHVAGNPPQPFSALA
                     FTLPLAFCGLGMGLAISPLFQLVLHAVPERDAGAGAGAMQAFQQVGSAVGIATVSSLF
                     FVRLKAGGGQDYPAAMNHALTYQLFAFTAILIILGLRRWTMGPPRPGKNPPADTPLAE
                     "
     gene            1002..1859
                     /locus_tag="EYO87_13655"
     CDS             1002..1859
                     /locus_tag="EYO87_13655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007256298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67016.1"
                     /translation="MSGWRSSLEVFALDRDASRVLLRCDRLIEAPNWHPDGWFLVNGG
                     GHLWRADARGLWRIDTGELHRCNNDHGFLPDGRIILSCQSDSGAGIHVLERNGPRDLG
                     LARPSWWHSAHGNRIAYACARGGDRVVRVAVLDMASGVERVLTPGLAHHDGPDFSACG
                     EFIWFNSDATGQAQIWRMRADGSEAAPVFRDANVNWFPHPSPCGRHVLYLAYPPGTQG
                     HPRDRSVQLWLMDINGGNRRRVVDLHGGQGSLNVPCWAPDGSAFAFMRYAREQPAPGR
                     APVQPVNGR"
     gene            complement(1846..2073)
                     /locus_tag="EYO87_13660"
     CDS             complement(1846..2073)
                     /locus_tag="EYO87_13660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010392836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1150 family protein"
                     /protein_id="HIC67017.1"
                     /translation="MDTKFDFGEGDSANTVYIRKIATSTLPEEVREQVPDLDTMYAVH
                     DADGERLALVRDRSLAFMLARQNELSPVSVH"
     gene            complement(2085..2495)
                     /locus_tag="EYO87_13665"
     CDS             complement(2085..2495)
                     /locus_tag="EYO87_13665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018000855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20 family protein"
                     /protein_id="HIC67018.1"
                     /translation="MSKISLGTHPYLLGFDQLERLAERAAKGSEGYPPYNIEHVAPDG
                     FRITLAVAGFAQDDLAVTTEDRQLVIRGRMAPADDDRVFLHRGIASRAFQRSFVLADG
                     VEVVSADIENGLLHIDLRRTAPQQVVQTIPISRK"
     gene            2714..2932
                     /locus_tag="EYO87_13670"
     CDS             2714..2932
                     /locus_tag="EYO87_13670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF465 domain-containing protein"
                     /protein_id="HIC67019.1"
                     /translation="MNMHHEMSHDQIARARLTALRCEHRDLDEAISALSSQQLTSTLT
                     LQRLKKQKLALKDQIARLEDELTPDIIA"
     gene            2990..3475
                     /gene="purE"
                     /locus_tag="EYO87_13675"
     CDS             2990..3475
                     /gene="purE"
                     /locus_tag="EYO87_13675"
                     /EC_number="4.1.1.21"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide mutase"
                     /protein_id="HIC67020.1"
                     /translation="MEKPVGIIMGSQSDWATMREAATILDDLGVGFEVRIVSAHRTPD
                     RLWDYGKGAVTRGLKVIIAGAGGAAHLPGMMASKTRLPVIGVPIQTRALSGVDSLYSI
                     VQMPKGFPVATMAIGAAGAANAGLMAAAILALGDPDLARRLEDWRAALSASIPEEPAD
                     E"
     gene            3468..4502
                     /locus_tag="EYO87_13680"
     CDS             3468..4502
                     /locus_tag="EYO87_13680"
                     /EC_number="6.3.4.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010392827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide
                     synthase"
                     /protein_id="HIC67021.1"
                     /translation="MNEIRSIGILGGGQLGRMLSVAASRLGLRCHVFDPGAAPAGEVA
                     WRLTTAPYEDDHALAAFAESVDVITYEFENVPTSALDLLERLRPIRPGRHALAVSQDR
                     LAEKTFLNEIGLATAAFADVPSQADLDAAIRRIGRPAILKTRRMGYDGKGQVRIGGEA
                     AEWTGAPSILEGFVDFSAEISVIVARGADGQVAAYDPGLNVHRDGILRSTTVPCGLPA
                     RAITDAVLIAGRIVNALDYVGVMGVELFVTPDGLIVNEIAPRVHNSGHWTQAGCAVDQ
                     FEQHIRAVAGLPLGDGKRFADVVMENLIGDDIGRVPDLLVAPRTQVHLYGKGEARPGR
                     KMGHLNRIAE"
     gene            4499..>4643
                     /locus_tag="EYO87_13685"
     CDS             4499..>4643
                     /locus_tag="EYO87_13685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352063.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HIC67022.1"
                     /translation="MRVARPRLAVRAAILHRDRLLMVNAYPGERSDLWCLPGGGVEPG
                     QSLP"
BASE COUNT          712 a         1455 c         1622 g          854 t
ORIGIN      
        1 accgggccgc tgctgggcgg cgcgctgatc acggccgatc tgtggggact ggactggcgg
       61 ccgatcttcc tggtcaatct gccggtcggc gcgctggtga tggtgctggg cggccgcctg
      121 atcccggcgc tggatcccga tcggcacatg agcatcgact ggccgggcgt cggcctgttc
      181 gggctgacca tcaccatgat cgtgttgccg gtgatcgagg gcgcgctgct gggctggccc
      241 tggtggtgca tcgccctgct ggcgggcgcc ctgccgatgg ccgcgctgtt cgtctggcgg
      301 cagcttcggc tggcgcgttc cggacgcacg cagctgctgc cggtcgcgct gatgcggaac
      361 aagggctatc tgtcgggcct gctgatggtg ctgctgcatt tttcggcgat tccgggaatg
      421 tttctggtgc tggccatcta tttccagacc ggattcgggc tggatccgtt ccagtccggt
      481 cttgcgaccg cgccctttcc gctgggcgtg atgacgggca gcttcatcac cgggcgtttc
      541 ggcgccaggg ggctggctgt gcggatgggg gtgggggcgc tggtgctgct gatcgggatg
      601 gcgtttctgc gccatgtcgc cggtaacccg ccgcagccct tctcggcgct ggcgttcacg
      661 ctgccactgg cgttttgcgg tttgggcatg gggctggcga tctcgcccct gttccagctt
      721 gtcctgcatg ccgtgcccga acgggatgcg ggcgccgggg cgggggcgat gcaggcgttt
      781 cagcaggtcg gttcggcggt gggcatcgcg accgtgtcca gcctgttctt cgtgcggctg
      841 aaggccgggg gcggacagga ttatccggcc gccatgaacc atgcgctgac ctatcagctt
      901 ttcgcattca cggcgatcct gatcatcctc ggcctgcggc gctggaccat ggggccgccc
      961 cggcccggca agaacccgcc ggcagacacg ccgttggcgg aatgagcggc tggcgttcgt
     1021 cgctggaagt tttcgcgttg gaccgcgatg ccagccgggt gctgctgcgt tgcgaccggc
     1081 tgatcgaagc gccgaactgg catccggacg gctggttcct ggtcaatggc ggcggccatc
     1141 tgtggcgcgc ggatgcccgg gggctttggc gcatcgatac cggcgaactg catcgctgca
     1201 acaacgatca cggtttcctg cccgacgggc ggatcatcct ctcctgccaa agcgacagcg
     1261 gcgcaggcat ccatgttctg gaacggaacg gtccgcgcga tcttggcctt gcgcgcccaa
     1321 gctggtggca ttcggcgcat ggaaaccgga tcgcctatgc ctgcgcgcgc ggcggcgacc
     1381 gggtggtgcg tgttgccgtc ctggacatgg caagcggggt cgagcgggtc ctgacaccgg
     1441 gcctcgccca tcacgacggg ccggatttct cggcctgcgg cgaattcatc tggttcaatt
     1501 cggatgcgac cgggcaggcc cagatctggc ggatgcgggc tgatggcagc gaggccgctc
     1561 cggtctttcg cgacgcaaac gtgaactggt ttccgcatcc ctcgccctgc ggcaggcacg
     1621 ttctgtatct ggcctatccg ccgggaaccc aaggccatcc ccgcgaccgg tccgtccagt
     1681 tgtggctgat ggatatcaac ggcggcaaca gacggcgcgt ggtcgatctg cacggcggtc
     1741 agggcagcct caacgttccc tgctgggcac ccgatggcag cgccttcgcc ttcatgcgct
     1801 atgcgcgcga acagccagca ccggggcgtg ccccggtgca gcctgtcaat ggacgctgac
     1861 cggcgacaat tcgttctgcc gggccagcat gaaggccaga gaacggtctc gcaccagcgc
     1921 cagacgctcg ccgtcggcat cgtggacggc atacatcgtg tcgaggtcgg gaacctgttc
     1981 acgcacctct tcgggcaggg tgctggtcgc gatcttgcgg atatagacgg tgttggcgct
     2041 gtcgccttcg ccgaaatcga atttggtatc catgatgatc ccctttattt gcggctgatc
     2101 ggaatggtct ggacgacctg ttgcggtgcc gttcgcctca ggtcgatgtg aagcagcccg
     2161 ttctcgatat cggccgagac gacctcgacc ccgtcggcca gaacgaaact gcgctgaaag
     2221 gcgcgcgagg cgatgccgcg atgcaggaag acgcgatcgt catcggccgg tgccatgcgg
     2281 cccctgatga caagctgccg atcctcggtg gtgacggcca gatcgtcctg ggcgaaaccc
     2341 gcgaccgcca gcgtgatgcg aaagccatcc ggcgcgacat gttcgatgtt gtagggcgga
     2401 tagccttccg atcccttggc cgcccgctcg gccagccgtt caagctggtc gaaacccagc
     2461 agatagggat gcgtccccag tgaaatcttg ctcatttctc agcccttgtc catgaaagcg
     2521 actgtcggag gatcccgtcg cggcaaccct tccggtttca atatgtgaat gaatcgccgc
     2581 cggcgcaagg ttcgcgccgg gttcagcgcc gcgcccgccc ggtccggggc ggctgacgca
     2641 agcttcttgt taacacagcg gccgcaaggg gctataagaa aggaaagcag gcctgtcagc
     2701 gaagtgtcgc cccatgaaca tgcatcacga aatgtcccat gaccagatcg cgcgggcgcg
     2761 gctgaccgcg ctgcgctgcg agcatcgtga tcttgacgag gcgatctcgg cgctgtcgtc
     2821 gcaacagctg acctcgacgc tgaccctgca gagactgaaa aagcagaaac tggcgctgaa
     2881 ggaccagatc gcccgcctgg aagacgaact gaccccggac atcatcgcct gattgcggcg
     2941 tagcgccgcg cgcgctatgg cgttgtccgg ccagaaaagg gggcggcgca tggaaaaacc
     3001 cgttggaatc atcatgggca gccagtcgga ctgggcgacc atgcgcgagg cggcgacaat
     3061 tctggacgat ctcggggtcg gcttcgaggt ccggatcgtc agcgcccatc ggacgcctga
     3121 ccggctgtgg gattatggca agggcgcagt gacgcgcggc ctgaaggtga tcatcgccgg
     3181 ggccggcggg gcggcgcatc tgcccggaat gatggcctcc aagacccggc tgcctgtgat
     3241 cggcgtgccg atccagacgc gggccctgtc gggtgtcgat tcgctctatt ccatcgtgca
     3301 gatgcccaag gggtttccgg tcgcgaccat ggccatcggc gcggccgggg ccgccaatgc
     3361 cgggctgatg gcggcggcga tcctggcgct tggcgatccg gatcttgcgc ggcggctgga
     3421 ggattggcgg gccgcgctgt ccgcctcgat ccccgaggag cccgccgatg aatgagattc
     3481 gcagcatcgg cattctcgga ggcggtcaac tgggtcggat gttgtcggtc gcggccagcc
     3541 gtcttggcct gcgctgccat gtcttcgacc ccggcgcggc gccagcgggc gaagtggcat
     3601 ggcggctgac gaccgcaccc tacgaagatg accatgccct tgccgccttt gccgaaagcg
     3661 tggacgtgat cacctacgaa ttcgagaacg tgccgacctc ggcactggat ctgctggaac
     3721 gcctgcgccc gatacgcccc ggccgccatg cgctggcggt gtcgcaggac aggctggccg
     3781 aaaagacctt tctgaacgag atcgggctgg ccacggcggc ttttgccgat gtgccctcac
     3841 aggccgatct ggatgccgcg atccggcgga tcgggcggcc cgcgatcctg aagacgcgac
     3901 gcatgggcta tgacggcaag ggccaggtca ggatcggcgg cgaagccgcc gaatggaccg
     3961 gcgcgccttc aattctggaa ggtttcgtcg atttctcggc cgagatcagc gtcatcgtcg
     4021 cgcgtggtgc agacgggcag gtggcggcct atgatcccgg cctgaacgtc catcgcgatg
     4081 gcatcctgcg atccacgacg gtgccttgcg ggttgcccgc gcgcgcgatc accgacgcgg
     4141 tgctgatcgc gggccggatc gtcaacgcac tggattatgt cggcgtgatg ggagtcgagc
     4201 tgttcgtgac gcccgacggg ctgatcgtga acgagatcgc gccgcgcgtg cataattcgg
     4261 gccactggac gcaggccggc tgcgccgtcg atcagttcga acagcatatc cgcgccgtgg
     4321 cgggtctgcc cctgggcgat ggcaagcgtt tcgccgatgt ggtgatggag aacctgatcg
     4381 gcgatgatat cggccgcgtg ccggatctgc tggtcgcacc gcgcacgcag gttcatctct
     4441 atggcaaggg cgaggcgcgg ccgggccgca agatgggcca cctgaaccgg atcgcggaat
     4501 gagggttgcg cgcccgaggc tggcggtccg cgccgcgatc ctgcatcgtg accggctgct
     4561 gatggtcaac gcctatccgg gcgaacgcag cgatctgtgg tgcctgcccg gcggcggggt
     4621 cgagccgggc cagtccctgc cag
//
LOCUS       DTVW01001043            1687 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2277122, whole
            genome shotgun sequence.
ACCESSION   DTVW01001043 DTVW01000000
VERSION     DTVW01001043.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1687)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1687)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1687
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2277122"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..148
                     /locus_tag="EYO87_13690"
     CDS             <1..148
                     /locus_tag="EYO87_13690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014889239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="D-xylose ABC transporter substrate-binding
                     protein"
                     /protein_id="HIC67023.1"
                     /translation="SPGGSKLWAKFLKPIPITKDNLNVVVDAGWITKEALCQGVSNGP
                     APCN"
     gene            242..1540
                     /locus_tag="EYO87_13695"
     CDS             242..1540
                     /locus_tag="EYO87_13695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008227900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HIC67024.1"
                     /translation="MADSATSQSAPPARKGFAALELDTRLLGMIGAFILIALAFHLAS
                     GGRFITPRNLFNLTIQTASVAIMATGMVFIIVDRHIDLSVGSILATASAVMAVTQTEV
                     MPNWLGLGLNHPATAWVAIAVGIITGGAIGAFQGWLVGYLTIPAFIVTLGGLLVWRNV
                     AWYITSGQTIGPLDSTFQLFGGINGTLGQTGSWILAIAASVAAVWALWSARRNKITHE
                     FHVKPLWAEAAVGAIIVVAIMGFVAIMNAYTIPSRLLERRFEARGEVMPEGLTQGYGV
                     PISVVLLIAVAIVMTIIARRTRFGRYIFATGGNPDAAELSGINTRLLTVKIFTLLGVL
                     CAISAVVASSRLTYHSNDIGVLDELRVIAAAVIGGTALKGGVGTIYGAIIGALIMQSL
                     QSGMAMVGVDAPLQNIVVGAVLVAAVLIDIWYRRRIGSQD"
     gene            1540..>1687
                     /locus_tag="EYO87_13700"
     CDS             1540..>1687
                     /locus_tag="EYO87_13700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020038548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HIC67025.1"
                     /translation="MADHRGTPLVELKDISIAFGGIRAVDHVSMDLYPGEVVGLLGHN
                     GAGKS"
BASE COUNT          272 a          545 c          548 g          322 t
ORIGIN      
        1 ctcgcccggc ggatccaagc tttgggccaa gttcctcaag ccgatcccga tcaccaagga
       61 caacctcaac gttgtggtgg acgcaggctg gatcaccaag gaggcattgt gccagggcgt
      121 ttcgaacggt ccggcaccct gcaactgatc tgaaaccggt ccgccctgac gacacggggc
      181 ggaccattct tctggcgacg gcgtgcctgc cgctcgcccg gttcccattt ccggaggtct
      241 gatggcagat tcggccacgt cccaatccgc gccgcccgcc cgcaaggggt tcgcggcgct
      301 ggaactcgat acccgcctgc tgggcatgat cggcgccttc atcctgatcg cgctggcgtt
      361 tcacctggcc tcgggcggcc ggttcatcac gccccggaac ctgttcaacc tgacgatcca
      421 gacggcatcc gtcgccatca tggcgaccgg aatggtcttc atcatcgtgg accgccatat
      481 cgacctgtcg gtcggttcga tcctcgcgac cgcctcggcg gtgatggcag tgacgcagac
      541 agaggtgatg ccgaactggc tggggctggg gttgaaccat ccggcgacgg cctgggttgc
      601 catcgcggtg ggcatcatca ccggcggcgc gatcggtgca ttccagggct ggcttgtcgg
      661 ctatctgacg atccccgcct tcatcgtcac cctgggcggc ctgctggtct ggcgcaacgt
      721 ggcctggtac atcaccagcg gtcagaccat cggcccactg gacagcacat tccagctttt
      781 cggtggcatc aacggcacgc tgggccagac cggaagctgg atcctggcca tcgccgcctc
      841 ggtcgcggcg gtctgggcgc tgtggtcggc gcgccgcaac aagatcacgc atgaattcca
      901 cgtcaaaccg ctttgggccg aagcggcggt gggtgcgatc atcgtcgtgg cgatcatggg
      961 attcgtcgcg atcatgaacg cctacaccat ccccagccga ttgctggagc gccggttcga
     1021 ggcgcgcggc gaggtcatgc ccgaaggact gacccagggc tacggcgtgc cgatctcggt
     1081 ggtgttgctg atcgcggtcg cgatcgtgat gaccatcatc gcccggcgca cgcggttcgg
     1141 gcgctatatc ttcgccaccg gcggcaaccc cgacgccgcg gaactgtcgg gcatcaacac
     1201 gcgcctgctg acggtcaaga tcttcacgct gcttggcgtt ctctgcgcca tttcggcggt
     1261 cgtggcatcc tcgcgcctga cctatcactc caatgatatc ggggttctgg acgaattgcg
     1321 ggtaatcgcc gccgccgtca tcggcggcac cgcgctgaag ggcggcgtcg gcacgatcta
     1381 cggcgcgatc atcggcgcgc tgatcatgca atcgctgcaa tcggggatgg ccatggtcgg
     1441 cgtggacgcg ccgttgcaga acatcgtcgt cggcgccgtg ctggtcgcgg ccgtgctgat
     1501 cgacatctgg tatcgccggc gcatagggag tcaggattga tggcagatca tcgcggaacg
     1561 ccgcttgtcg aactgaagga catcagcatc gccttcggcg gcattcgggc cgtcgatcat
     1621 gtgtcgatgg atctctatcc cggcgaggtg gtgggcctgc tgggccataa cggcgcgggc
     1681 aaatcga
//
LOCUS       DTVW01001044            1730 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2279903, whole
            genome shotgun sequence.
ACCESSION   DTVW01001044 DTVW01000000
VERSION     DTVW01001044.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1730)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1730)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1730
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2279903"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(257..526)
                     /locus_tag="EYO87_13705"
     CDS             complement(257..526)
                     /locus_tag="EYO87_13705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67026.1"
                     /translation="MSHNDNDPGRSARNHRPAVIAIGLALIVAALAWWLFLPGVNEGD
                     DGIATTEPPQGTPVTQAEGVSNPDAAAAPAAGTEGAATDSPPVSN"
     gene            complement(566..>1730)
                     /locus_tag="EYO87_13710"
     CDS             complement(566..>1730)
                     /locus_tag="EYO87_13710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HIC67027.1"
                     /translation="GTSLEGHALPVRGGLTLDLSRMNRVVQIRAEDMQVSVEPGVTRE
                     ALNVELRATGLFFPVDPGANASLGGMAATRASGTTAVRYGTMRDNVLGLQVVLADGRI
                     IRTGTRAAKTSAGYDLTGLFVGSEGTLGVITELTLRLHGQPEEVAAAVCAFDSLDHAV
                     ECVSATIQSGIPMARIEFVDAATARAFNAHSGSTLPEKPHLMVEFHGSPGAVREDAER
                     FGDLAGDFGAQGFDWAVTAEDRARLWRMRHGAYHACRALRPGATGVVTDVCVPMSHLP
                     AAVAAAAADIAGAGLIGPIVGHVGDGNFHAQILVEPGNATELAEAKRIATRMAERALR
                     VGGTITGEHGVGIGKRGLMAAEHGEGWQVMGAIKTALDPHDILNPGKLVPDRN"
BASE COUNT          273 a          598 c          574 g          285 t
ORIGIN      
        1 cgcgaacacg ataccgccag cacgagcaac agcccgatca ggattttagt cagatgcctc
       61 atatcgcctg ccccacggga tttgctgctg ctctgcgcct gtcggcggcg cttggtgccg
      121 ttatcgcaaa gccgtgaggc aaagtcaccg gggcgtgacg gtcacgtctg cgtcagaaag
      181 cggaccggca ggcgcagagg ccaaggcttc gcccgatcag gcggggcagg atcccttttg
      241 cagcggcgta tcgccttcag ttgctgaccg gcgggctgtc cgtggccgca ccctcggtcc
      301 cggcggcggg cgcggcggct gcatccggat tgctcacccc ttcggcctgc gtcacgggcg
      361 ttccctgggg cggttcggtg gtcgcgatgc cgtcatcgcc ttcgttcaca ccgggaagga
      421 acaaccacca ggcaagcgcc gcgacgatca gcgccagccc gatggcgatg accgccggcc
      481 ggtgatttct ggccgagcgg ccgggatcgt tgtcgttgtg ggacatggca aggctccttt
      541 ctggatcaac atgcaaacgg gaaggtcagt tccggtccgg caccagcttt ccggggttca
      601 ggatgtcgtg gggatcaagc gccgtcttga tcgcgcccat cacctgccag ccttcgccat
      661 gttcggccgc catcaatccc cgcttgccga tgcccacgcc atgttcaccg gtaatcgtgc
      721 caccgacgcg cagcgcgcgt tcggccatgc gggtggcgat acgcttggcc tcggcgagtt
      781 cggtcgcatt gcccggttcg acaaggatct gagcgtgaaa attgccgtcg cccacgtggc
      841 ccacgatcgg cccgatcagc cccgccccgg cgatatcggc ggcggcggcg gccacggccg
      901 cgggcagatg cgacatcggc acgcaaacat cggtgaccac cccggttgcg ccggggcgaa
      961 gcgcgcggca ggcgtgatag gcaccatgcc gcattcgcca caggcgggcg cgatcctcgg
     1021 ccgtcacggc ccagtcgaaa ccctgtgcgc cgaaatcgcc cgccagatcg ccgaatcgct
     1081 ccgcatcctc gcgcaccgcg ccgggcgagc cgtgaaattc caccatcaga tgcggctttt
     1141 cgggcagggt gctgccggaa tgggcattga aggcgcgcgc ggtcgccgca tcgacgaatt
     1201 cgatccgggc catcggaatg ccggactgga tggtggcgct gacgcattcg acggcgtgat
     1261 cgaggctgtc gaaggcgcag actgcggcgg cgacctcttc gggctggccg tgcaggcgca
     1321 gggtcagttc cgtgatcacg cccagcgtgc cttcggaccc cacgaaaagg ccggtcagat
     1381 catagcctgc gctggtcttg gccgcccgcg tgccggtgcg gatgatgcgc ccgtcggcca
     1441 gcaccacctg caagcccaga acgttgtcgc gcatggtgcc atagcgcact gcggtcgtgc
     1501 cgctggcacg cgtcgcggcc atgccgccca ggctggcatt ggcgcctgga tcgaccggaa
     1561 agaacaggcc cgtcgcccgc aattccacgt tcagcgcctc gcgcgtcacg cccggttcga
     1621 cgctgacctg catgtcctcg gcgcggatct ggaccacccg gttcatccgc gacagatcca
     1681 gcgtcaggcc gccgcgcacc ggcagggcgt gaccttccag cgacgtgccc
//
LOCUS       DTVW01001045            1804 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2280218, whole
            genome shotgun sequence.
ACCESSION   DTVW01001045 DTVW01000000
VERSION     DTVW01001045.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1804)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1804)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1804
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2280218"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..824)
                     /locus_tag="EYO87_13715"
     CDS             complement(<1..824)
                     /locus_tag="EYO87_13715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009177651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HIC67028.1"
                     /translation="MSRQMTRRAWLLSDAPQTRNQARLGAIYQGWLTFRGNKLAMFGL
                     VILILLIAMAIFAPLLAPQNPFAQDLANRLKPPSAQNLLGTDALGRDILSRLIHGSRI
                     TLFIVGTVALIAPIIGLFIGTVAGFAGGWVDQVLMRITDIFLAFPKLILALAFVAALG
                     AGIGNAVLALALTAWPPYARLARAETLTIRNADYIAAARLQGAGRMRLLIRHIWPLCL
                     SSLIVRVALDMAGIILSAAGLGFLGLGAQPPMPEWGAMISDGRTYILDFWWVAAMPG"
     gene            complement(821..>1804)
                     /locus_tag="EYO87_13720"
     CDS             complement(821..>1804)
                     /locus_tag="EYO87_13720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009178281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HIC67029.1"
                     /translation="VLLSLLLTMLGLLLVTFVIGRVMPIDPVLKVVGDRATQAQYDAA
                     YQAMGLDRPLYVQFAGYVSEVLTGDFGRSISTGQMVIDDIRRVFPATLELATLGTLIG
                     VFAGVPLGVIAAARRGGIVDQVARVVALVGYSMPIFWLGLMGLLIFYGILGWVGGPGR
                     QGIIYDGMVPKVTGLLLVDTLVAGDWGAFKDAFSHIILPASLLGYFSLAYISRMTRSF
                     MLEQLSAEYITTARVKGLSESAVIWRHAFRNISIPLVTVIALSFGSLLEGSVLTEIIF
                     SWPGLGQYITKALLAGDMNAVLGGTVVVGTSFVALNLLSDILYRVLDPRSE"
BASE COUNT          368 a          612 c          580 g          244 t
ORIGIN      
        1 ccgggcatcg ccgcgaccca ccagaaatcc aggatatagg tccgcccgtc cgaaatcatc
       61 gccccccatt ccggcatcgg cggctgcgcg cccagaccca gaaagcccag tcccgccgcc
      121 gacaggatga tccccgccat gtccagcgcc acccgcacga tcagcgacga aaggcacagc
      181 ggccagatgt gccggatcag cagccgcatg cgccccgccc cttgcaggcg ggcggcggcg
      241 atgtagtccg cgttgcggat ggtcagcgtc tcggcccggg caaggcgggc atagggcggc
      301 caggctgtca gcgccagcgc cagcaccgcg ttgccgatcc ctgcaccaag tgctgccacg
      361 aaggccagcg ccaggatcag cttggggaag gccaggaaga tatcggtaat ccgcatcagc
      421 acctgatcga cccagccccc cgcgaagccc gccacggtgc cgatgaacag tccgatgatc
      481 ggcgcgatca gggccaccgt gccgacgatg aacagcgtga tccgcgagcc gtggatcagg
      541 cgcgacagga tgtcccggcc aagcgcatcg gtgcccagca ggttctgcgc cgatggcggt
      601 ttcagccggt tcgcgagatc ctgcgcaaag gggttttgcg gggccagcag cggcgcgaaa
      661 atcgccatcg cgatcagcag gatcaggatc accagcccga acatggccag cttgttgccg
      721 cgaaatgtca gccagccctg atagatcgcg cccagccgcg cctggttgcg ggtctgcggc
      781 gcatcggaaa gcagccatgc gcggcgggtc atctgtcggc tcattcggac ctcggatcca
      841 gcacgcgata caggatgtcg ctgagcaggt tcagcgccac gaaagaggtc ccgacgacaa
      901 ccgtgccgcc aaggaccgcg ttcatgtcgc cggccagcag cgccttggtg atgtattggc
      961 ccaggcccgg ccacgagaag atgatctcgg tcagcaccga tccttccagc agcgagccga
     1021 aggacagcgc gatgaccgtg accagcggga tcgagatgtt gcggaaagcg tggcgccaga
     1081 tcaccgcgct ctcggacagg cccttgacgc gggcggtggt gatgtattcg gccgaaagct
     1141 gttccagcat gaagctgcgg gtcatgcggc tgatataggc gaggctgaaa tagcccagca
     1201 gcgaggcggg caggatgatg tggctgaacg cgtccttgaa cgcgccccaa tcgcccgcga
     1261 ccagggtgtc caccagcaga agcccggtga ccttgggaac catgccgtca tagatgatgc
     1321 cctggcgacc cggcccaccg acccagccca gaataccgta gaagatcaac aggcccatca
     1381 ggcccagcca gaagatcggc atcgaatagc cgaccagcgc gaccacgcgg gcgacctgat
     1441 cgacgatgcc gccgcgccgg gcggccgcga tcacgcccag gggcacgccc gcgaacacgc
     1501 cgatcagcgt gcccagcgtc gccagttcca gcgtcgcggg aaagacccgc ctgatgtcgt
     1561 cgatgaccat ttgcccggtc gagatcgagc gcccgaaatc gccggtcagc acctcgctca
     1621 cgtagcctgc gaactggaca tagagcggcc ggtccaaccc catcgcctga taggcggcgt
     1681 cgtattgcgc ctgggtggcg cgatcgccga cgaccttcaa caccgggtcg atgggcatga
     1741 cgcggccgat cacgaaggtg accagcaaca gacccagcat cgtcagcagc agcgacagca
     1801 ggac
//
LOCUS       DTVW01001046            2962 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2283831, whole
            genome shotgun sequence.
ACCESSION   DTVW01001046 DTVW01000000
VERSION     DTVW01001046.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2962)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2962)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2962
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2283831"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..906)
                     /locus_tag="EYO87_13725"
     CDS             complement(<1..906)
                     /locus_tag="EYO87_13725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009503115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HIC67030.1"
                     /translation="MTISKLLVANRGEIAARVLRTAKARGLATAVLRHVAEQEGPAHL
                     IADEVVMIEGPTPVAAYLDIPQIVEAAKGIGADAVHPGYGFLSENAGFVAALEKAGVT
                     FVGPTSEVIDLMGDKVRARAFVEERGFPVAPSAIEDDDPANFVERARAVGYPLLIKPS
                     AGGGGKGMRVVREDSTLETEIETARREGERYFGDGRLFVERYIESPRHIEVQVMGDGQ
                     GKVVHFWERECSIQRRFQKIIEETPSPALTPEQRDEICETAAGIASAVNYRGAGTVEF
                     IYAQDGTFYFLEMNTRLQVEHPVTEM"
     gene            complement(919..2718)
                     /locus_tag="EYO87_13730"
     CDS             complement(919..2718)
                     /locus_tag="EYO87_13730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009803490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1446 domain-containing protein"
                     /protein_id="HIC67031.1"
                     /translation="MSERKLRIGCASGFWGDTPEAIGQLVSKAEIDYLVFDYLAEVTM
                     SLMARARAKAPESGYAPDFVKALAPWLPDIKAKGIKVVANAGGVNPRGCRDALAKAAA
                     QAGIDLSIGVVLGDDLLPRADEIRKNGQTEMFSGVAFPDDIWSMNAYLGARPIAAALD
                     AGADIVITGRCADSAVALGPLMHEYGWGDDDWDKLSQGSLAGHLIECGPQGTGGNFTD
                     WQDVPGWDNMGMPIVEVSEDGSFIMTKTPDTGGLVVPGSVGEQMLYEIGDPRAYLLPD
                     VICDWSGVTLEQVGPDRVLVKGGRGLGRTDSYKVSATHADGWRAVSTLTLAAIDAPAK
                     AERVAEAILTRCRRIFRDRNMGDFRQVSVEVLGAEAAYGANARARTREVVLKIGAVHD
                     DRAALNIFAGEIAPMAISTAQGLTGFFAGRPKVQPVVRLFSFLQSKAETPVAVEVDGK
                     DVPVSVATTPVHLDPPAAPPADSREPGPDVVKVRLVDLAWGRSGDKGDIANIGILARK
                     PDYLPYIRSALSEEVVKDYFSHVCDGRVERFDLPGSHSLNFLLHESLGGGGIASVRID
                     PQGKGFAQMLLDIEIPVPADLAARDGLNAAARN"
     gene            complement(2740..>2962)
                     /locus_tag="EYO87_13735"
     CDS             complement(2740..>2962)
                     /locus_tag="EYO87_13735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009803491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HIC67032.1"
                     /translation="LDDKVAELVAQIAAQSPSAIRLGKYACHAMEDMTYPQQMRFAET
                     LLPRVAQTEDAREGFDAFIEKRKPEWTGR"
BASE COUNT          529 a          987 c          882 g          564 t
ORIGIN      
        1 catctcggtc accggatgtt cgacctgaag gcgggtgttc atttccagga agtaaaaggt
       61 cccgtcctgc gcatagatga attcgacggt cccagccccg cgatagttga cggcgctggc
      121 aatacctgcg gcggtttcgc agatctcgtc ccgttgttcg ggagtcagcg ccggtgacgg
      181 cgtttcctcg ataatcttct ggaaccggcg ctggatcgaa cattcgcgtt cccagaaatg
      241 gaccacttta ccctgcccgt cgcccatcac ctgcacctcg atatggcgcg gactttcaat
      301 atagcgctcg acgaacagcc gcccgtcacc gaaataccgc tcgccttcgc ggcgtgcggt
      361 ttcgatttcg gtctccagcg tgctgtcctc gcgtacgacg cgcatgccct tgccgccacc
      421 gccggccgag ggcttgatga gcagcggata gccaacggcg cgggcgcgtt cgacaaagtt
      481 cgccggatca tcatcctcga tggccgaggg ggcgacggga aacccgcgtt cctcgacaaa
      541 ggcgcgggcg cggaccttgt cccccatcag gtcgatgacc tcggacgtcg ggccgacaaa
      601 ggtcactccg gctttttcca gcgccgcgac aaaaccggca ttctctgaca gaaagccata
      661 gccgggatga accgcgtccg cgccgatccc tttggcggct tcgacgatct gaggaatatc
      721 gagataggcg gccacgggcg tcgggccctc gatcatcacg acctcatctg cgatcagatg
      781 cgccggcccc tcttgctcgg cgacatgacg caacacggca gtcgcaagcc cgcgggcctt
      841 agcggtgcgc aacacgcgcg ccgcgatctc gccccgattg gcgaccagga gtttcgaaat
      901 ggtcatggtg tcgtcctctt agttccgggc cgcggcattc agtccgtcac gtgcggccag
      961 atcggctggc acgggaattt cgatatcaag cagcatctgc gcgaaccctt tgccctgcgg
     1021 gtctatgcgg accgaggcga tgccgccacc gccaagcgat tcatgcaaca ggaaattcag
     1081 cgaatggctt ccaggcaagt cgaaccgttc taccctgccg tcgcagacat gggagaaata
     1141 gtccttcacc acctcttcgc tgagagccga gcggatatat ggcaggtagt ccggcttgcg
     1201 cgcgaggatg ccgatattgg cgatgtcccc cttgtcgccc gagcggcccc aggccaaatc
     1261 gacgaggcgg accttgacaa cgtccggacc gggctcgcgg ctatctgcgg gcggtgcggc
     1321 aggcggatca aggtggactg gcgtagtggc cacgctcacg ggcacatcct tgccgtcgac
     1381 ctcgaccgcg acgggggttt cggccttgct ctgaaggaag gaaaatagac ggaccaccgg
     1441 ctgcaccttt ggccgtccgg cgaagaaccc ggtcagaccc tgcgcggtcg aaatcgccat
     1501 cggtgcgatt tcgccggcaa aaatgttcag cgcggcgcga tcgtcatgga ccgcgccgat
     1561 cttgagcacc acctcgcggg tccgggcgcg cgcatttgcg ccataggccg cctcggcccc
     1621 cagcacctcg acgctgacct gccggaaatc tcccatgttg cggtcgcgga aaatccggcg
     1681 acagcgggtc aggatcgcct cggccacacg ttcggccttg gcgggtgcgt caatcgcggc
     1741 cagtgtcagg gtagagaccg cgcgccagcc atcggcatgg gtcgccgaca ccttgtagct
     1801 gtcggtgcgc ccaagccccc tgccgccctt gaccagcacc cggtcgggtc cgacctgttc
     1861 cagggtgacc ccggaccagt cgcagatcac gtcgggcaac aggtaggcgc gcgggtcccc
     1921 gatttcatag agcatctgct ctccgactga cccgggcacg accagcccgc cggtgtcagg
     1981 cgtcttggtc atgatgaaac tgccgtcttc ggacacctcg acgatgggca tgcccatatt
     2041 gtcccaaccc ggcacgtcct gccagtcggt gaagttgccg ccggttccct gggggccgca
     2101 ttcgatcagg tggccggcca gcgatccctg gctgagcttg tcccagtcat cgtcgcccca
     2161 gccgtattca tgcatcaggg gaccaagcgc gaccgcgctg tcggcgcagc gtccggtgat
     2221 cacgatgtcg gccccggcat ccagcgcggc agcgatgggg cgggcaccca gataggcatt
     2281 catgctccag atatcatctg gaaatgcgac acccgagaac atttccgtct gaccgttttt
     2341 gcgaatttca tcggccctgg gcaacaggtc atcgcctagc acgactccga tggacagatc
     2401 gattccggcc tgggcggcgg ctttggcaag cgcatcgcgg cagccacgcg ggttcacgcc
     2461 ccctgcattg gcaacgacct tgatcccttt tgccttgata tccggcaacc agggtgccag
     2521 cgccttgacg aagtccggcg catagcccga ctcgggcgct ttggcgcggg cccgcgccat
     2581 cagcgacatt gtcacctccg ccagatagtc aaacaccaga tagtcgatct cggcctttga
     2641 gaccagttga ccgatcgctt ccggcgtatc gccccagaag cccgacgcgc atccgatgcg
     2701 cagctttcgt tccgacatat tcctctcctc cccgtttgat cagcggcccg tccattcagg
     2761 tttgcgcttc tcaataaagg catcaaagcc ttcgcgcgcg tcttcggtct gtgctactcg
     2821 cggtaacagt gtttctgcaa accgcatctg ctgcggatag gtcatgtcct ccatcgcgtg
     2881 acaggcgtat tttcccagcc ggatcgcgct cggcgattgc gcagcaatct gggcaaccag
     2941 ttctgcaacc ttgtcgtcca gc
//
LOCUS       DTVW01001047            2033 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2285714, whole
            genome shotgun sequence.
ACCESSION   DTVW01001047 DTVW01000000
VERSION     DTVW01001047.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2033)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2033)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2033
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2285714"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1528
                     /locus_tag="EYO87_13740"
     CDS             <1..1528
                     /locus_tag="EYO87_13740"
                     /EC_number="1.1.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005983691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycerol-3-phosphate dehydrogenase"
                     /protein_id="HIC67033.1"
                     /translation="IIGGGINGCGIARDAAGRGLSVRLAEMGDLAQATSSKSTKLFHG
                     GLRYLEYLEIRLVREALREREVLLRAMPHISWPMRFVLPLDPKMTFESDTPVSRALSL
                     AMPWNRGHRPNLLIRAGLFLYDHLGGRKILPPTSTLSLKDTPEGAPLQDRLERAYEYS
                     DCWVDDARLVALNARDAAMRGAGIMVGAKVAEAAREDDLWRVTLEDGRAFRARALVNA
                     GGPWVGQVIRDVAHLPSTETVRLVRGSHIVVPRLYDHDKAYFFQGADGRIIFAIPYEQ
                     RFTLIGTTDRDHQGSPLEAECTPEEQEYLCGFASDYFARPVTRDQIVWTYSGVRPLYD
                     DGAKSATAATRDYVLSLDQAGAPCLNVFGGKITTYRRLAEHAMERLAPHFPRARSAWT
                     AGAPLPGGDFPVDGVAGLIADLRAAYPFLDQDRAARLVRAYGTEAWTMLGTAKAAADL
                     GRDFGAGLTETEVGWLMDKEFARRAEDVVWRRSKLGLQMNADQIAELEGWMGQKRAAA
                     "
     gene            1525..>2033
                     /locus_tag="EYO87_13745"
     CDS             1525..>2033
                     /locus_tag="EYO87_13745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIC67034.1"
                     /translation="MTLELRGISKTVGGRVHIHATDLVLQPGSMNVLLGPTQAGKTTL
                     MRLMAGLDRPAQGRVFWNGDDVTDQRVQDRKVAMVYQQFINYPSMSVYENIASPLRLM
                     RVKRDEIDRRVKQTAEMMRLTPLLDRRPLELSGGQQQRCALARALVKDAGLVLLDEPL
                     ANLDYKLRE"
BASE COUNT          339 a          643 c          714 g          337 t
ORIGIN      
        1 catcatcggc ggcggcatca atggctgcgg aatcgcgcgc gacgcggcgg gccgcggtct
       61 gtcggtccgg ctggccgaga tgggcgacct ggcgcaggcg accagttcca aatccaccaa
      121 gctgtttcac ggcgggctgc gctatctgga atatctcgaa atccggctgg tccgcgaggc
      181 gctgcgcgaa cgcgaggttc tgctgcgcgc catgccccat atcagctggc cgatgcgctt
      241 cgtgctgccg ctggacccga agatgacgtt tgaatcggac acgcccgtca gccgcgcgct
      301 gtccctggcg atgccgtgga accgcgggca ccggccgaac ctgctgatcc gggcggggct
      361 gtttctctat gatcatctgg gcggtcggaa gatcctgccc cccaccagca ccctgtcgct
      421 gaaggatacg cccgaagggg caccgctgca ggaccggctg gagcgggcct acgaatacag
      481 cgattgctgg gtggacgatg cgcggctggt ggcgctgaac gcgcgcgacg cggccatgcg
      541 cggggccggg atcatggtcg gcgccaaggt cgccgaggct gcgcgtgaag acgatttgtg
      601 gcgcgtgacg ctggaagacg gacgcgcctt ccgcgcccgg gcgctggtca atgcgggcgg
      661 gccgtgggtc ggccaggtga tccgcgacgt ggcgcacctg ccctcgaccg agacggtgcg
      721 cctggtgcgc ggatcccaca tcgtcgtgcc aaggctgtat gaccacgaca aggcatattt
      781 ctttcagggc gccgatggcc ggatcatctt tgcgattccc tatgagcagc gattcaccct
      841 gatcggcacc accgaccgcg atcaccaggg cagcccgcta gaggccgaat gcacccccga
      901 ggaacaggaa tacctgtgcg gcttcgcctc ggactatttc gcacggccgg tgacgcgcga
      961 ccagatcgtc tggacctatt ccggggtccg gccgctctac gacgatggcg ccaaatcagc
     1021 caccgcggcg acgcgcgact atgtgctgtc gctggatcag gccggcgcgc cctgcctgaa
     1081 cgtctttggc ggcaagatca ccacttatcg ccggctggcc gagcacgcga tggaacggct
     1141 ggcgccgcac tttccgcggg cccgttcggc ctggacggcc ggtgcgcccc tgcccggcgg
     1201 agatttcccg gtcgatggcg tggccggcct gatcgcggat ctgcgcgcgg cctatccgtt
     1261 tctggatcag gaccgggccg cgcggctggt ccgggcctac gggaccgagg cctggaccat
     1321 gctgggcacg gcaaaggctg cggccgatct tggccgcgat ttcggcgccg gcctgaccga
     1381 aaccgaggtc ggctggttga tggacaagga attcgcgcgt cgcgccgagg atgtcgtctg
     1441 gcggcgcagc aagctgggcc tgcagatgaa cgcagaccag atcgccgaac tggagggctg
     1501 gatgggccag aaaagggcag ccgcatgacg ctggaactgc gcggcatctc taaaacggtc
     1561 ggcggacggg tgcatatcca tgccaccgac ctggtcctgc aaccgggcag catgaacgtg
     1621 cttctgggtc cgactcaggc cggaaagaca acgctgatgc gattgatggc gggcctggac
     1681 cgtccggcgc aaggccgcgt cttctggaat ggcgatgacg tgaccgacca gcgtgtgcag
     1741 gaccgcaagg tggcgatggt ctatcagcaa ttcatcaatt atccgtccat gtcggtctat
     1801 gaaaacatcg cctcgcccct gcggctgatg cgcgtgaagc gggacgagat cgaccggcgg
     1861 gtgaagcaaa ccgccgagat gatgcgcctg acgcccttgc tggatcggcg gccgctggaa
     1921 ttgtctggcg gccagcagca gcgctgcgcg ttggcgcgtg cgctggtcaa ggatgcgggc
     1981 ctggtgctgc tggacgagcc gctggccaat ctggactaca agctgcgcga gga
//
LOCUS       DTVW01001048            9177 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2291901, whole
            genome shotgun sequence.
ACCESSION   DTVW01001048 DTVW01000000
VERSION     DTVW01001048.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 9177)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9177)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9177
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2291901"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1260
                     /locus_tag="EYO87_13750"
     CDS             <1..1260
                     /locus_tag="EYO87_13750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_436819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-xanthine permease"
                     /protein_id="HIC67035.1"
                     /translation="QHVLVMAASPITAVFLVAQTLGFDTALTVSVISATFLVCGLGSI
                     LQSFGPQGFGARLPFIMVPGGAPIAIFLAIAVQADVQTAVGAVLLTAIFYFAALPVFR
                     RLLRYFPPIVVGTMLLLVSVNLVRIYGGTITGRPGSENFADPLNVGLALATIAMTVLF
                     AWGFTGTLRRISVMLGLVAGTALAAIFGQIDLSGVGNGPLIAVPQLFPFGMPKFDLIA
                     ALPLIVFSIISMAEATGQTIATAEIVGRREDARAIVPRTIRGDAVMSLVGGLFGTSLI
                     ITSGENVGIVRATNVKSRYVTATAGVILILIALLAPVSRLASALPGPVIGGTAVVVFA
                     IIGVIGIDLLRRTDLREHGAMVTLASGLAMGMLPILVPGIYSQFPQWSQMIIGNGLAA
                     GTITAAVVNAMFHHVRPVAEPSLQESN"
     gene            1260..2657
                     /locus_tag="EYO87_13755"
     CDS             1260..2657
                     /locus_tag="EYO87_13755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009817424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HIC67036.1"
                     /translation="MRDLPETLFERTEILLVPGRMLLEDGPASGMAALIRGGRFAEIA
                     PAADLTARHPGLTPVDLPDHLMMPGFIDTHTHLTQSLGKSLVFGEPSEIFRRIWVPLE
                     GSLDQRMVYLSSKLAALECLRGGFTCAVDAGTRSAGHLEAVKTAVQETGIRSVIGLIC
                     NDLGGAADVPPPDRIIARAEAHLHAGEGDPLLHPSLAISIPEVGSDGMLARMSHMAAE
                     AGAIFQTHVNEHLVAVERSLVANGRRPLEHLAHIGALGPHVLIAHATLVTPGELNILR
                     DTGTAVAYNPVASIWKGNAIAPALQMAALGIRFGLGTDGTRADGFRLMDAGESLQRAG
                     YGLASGDSSCGGGWLWLAAATGMAADAAGLGAVTGRIAPGLAADFLLVDLDRPEFTPS
                     HDLTWELVRYGNRDQIDAVFTQGRLRLWQGWPVDWDARALLTEIRETTAGAIAAAPIT
                     RIHPPADYRCAKAPA"
     gene            2654..3358
                     /locus_tag="EYO87_13760"
     CDS             2654..3358
                     /locus_tag="EYO87_13760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001312589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HIC67037.1"
                     /translation="MTLFLILSAAVFVAAFIQGAIGIGFALIVAPVFGILAPEYLPVT
                     LLILMLPLNFHIAWRERGDIDRLGTGWITLGRFFGTFAGLWMLAALSGRHLGLAVGWF
                     TVIAAAVALLAPRFDPNRPAALGVGLFTGVTETATGIGGPPLALLYQHAPGPVLRSTV
                     ATCFFVGEVISLAILAIMGMFQMSQASAALILMPAIMAGSALSRRTHAHIGGGSLRYA
                     VLIFAVVSGAFLILRS"
     gene            3581..4816
                     /locus_tag="EYO87_13765"
     CDS             3581..4816
                     /locus_tag="EYO87_13765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hint domain-containing protein"
                     /protein_id="HIC67038.1"
                     /translation="MPYVTQIPSSLITVGVDGSIAFVPDTSLLNAFESSQEFERYDVE
                     ATNGTTLQNGDEIATVTSDGTTLASGTYLGSAEINNALVTVGIPALANVSLQVNPIAG
                     DIFEGDDGEYYFLSDEPVDDAHIAVTASITVAGTPVEVTAPISEITDQLADAVAAVPL
                     AGPAAAATIRGTGNLLQSTANTAIVTLDYDASGELVLSDDEVVPCFLRGTMIETADGP
                     VAVESLKVGDLVRTMDHGLQPLRWIGCARLDASALHRKPKLRPIRVRAGALGQGMPES
                     DLFLSPQHRVLVRSQIAQRMFCADEVLVAATHLTEIDGIDVVEDDTDVVYYHMLFERH
                     EVVFSNGAATEAMYTGDQAMKAVGEIARAEIFALFPQLQDRRESAASAKPIASGRKAR
                     NMVARHVRNGRELVAEPGA"
     gene            4963..6261
                     /locus_tag="EYO87_13770"
     CDS             4963..6261
                     /locus_tag="EYO87_13770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018304178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c peroxidase"
                     /protein_id="HIC67039.1"
                     /translation="MFRVLVLILAFPAAATEFPAAVGDDAYRPTDPDRVALGRLLFWD
                     PILSGNRNISCATCHNPRFGTGDGLSLGMGEGGVGLGPDRIADPQNPPEQRVPRNAPG
                     LWNLGATEFIRLFDDGRIESLPDGSLRTPMGPEMVRGFDTLLSAQTMFPVLSADEMAG
                     HYSENEVSRAVRKGLITGEDGAWDLIAARVRAIPEYAAMFEDAFPGDDKLDFTDISDA
                     IAQFVEAEWRSDTAPFDAWLRGTGDLPDAALQGAQLFYGSTGCATCHSGPFQTDHGFH
                     ATGQPQLGPGKRARFERHARDDGRFRVTGREADRFAFRTPSLRNVTETGPWGHAGAYS
                     DLRRFVRDHAAPRQALRTYARDATLPDMGVPQQDDWRVMDDPAEVAAISAAIEGRDMV
                     LNDRDLDALMAFLATLRDDAALKGRLGPPATVPSGLPVDR"
     gene            complement(6305..7768)
                     /locus_tag="EYO87_13775"
     CDS             complement(6305..7768)
                     /locus_tag="EYO87_13775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010139737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CRTAC1 family protein"
                     /protein_id="HIC67040.1"
                     /translation="MIRWLLLVLLATPVAAADPIFQAVKVPDHVYTGGWEHFVGGGLA
                     AFDCDGDSLPELLAAGGTSPMTLLRNRGGMVFERGEFPVITGASGVYALDLDGDGAMD
                     LVVLRVGPNLTLKGDGACGFAVYDFGVTPGDAWTTAFSAIWEAGRTRPTLAFGNYVDR
                     QDPDGPFQACDDNLLLRPEAEGYAETILTPGFCALSILFSDENRDGRATLRLSNDRQY
                     YVRDGAEQMWSPTENRFLGPEDGFEGPSIWGMGIASRDITGDGLPDLVLTSMGDQLTM
                     LSTPTGLEMAPYEIGSFAQRPHVGDDGRPSTGWHAAWGDVDNDGDADLFIAKGNVDQM
                     PDMAMDDPNNLLLNEAGRFREVAASAGVASMRRGRGAALVDLDGDGRLDLAVVNRLAP
                     LEVWRNLSTAGRAVSVSLSQPGGNRDAVGAWVELRTKAGTQIQELTIGGGHAGGAVSP
                     LHFGIGDATSAEIRVTWPDGSIGEWTRTGPGPVLIRR"
     gene            complement(7765..8916)
                     /locus_tag="EYO87_13780"
     CDS             complement(7765..8916)
                     /locus_tag="EYO87_13780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009825683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HIC67041.1"
                     /translation="MLSLKQQIYEQIRSAGRISRAALAKALRVSPGSVTPLVSDLLAA
                     DLLREPENAARHAGRGRPPVTLAVNAQRGLVAGLKVSDHDYSAVLVDLAGQPVAGATL
                     PRAAESRSVASMLDEVDCLYSRLLCAAGPQMPPVLGAGLGMPGMVDHASGRLRWSPIV
                     DERDVDLAALVSARLGLPASVDNDANLLTMAELWFGKGRSLSDFAVVTIEYGVGLGLV
                     VDHAPYRGAHGLGMELGHTKVQLDGALCRCGQRGCLEAYVADFALVREAPIALNGELP
                     RRGEILESLFRQAKDGNEAARAIFDRAGRYLALGLANVANLFDPRRIILSGSRMRYDF
                     LYAEEMLAEVASLTLNPPPPIEVHAWDDLVWARGAAALALSDLTPRLMS"
BASE COUNT         1477 a         3067 c         2998 g         1635 t
ORIGIN      
        1 cagcatgtgc tggtcatggc cgcgtcgccg atcaccgccg tctttctggt cgcccagact
       61 ttgggcttcg acactgcgct gacggtcagc gtcatcagcg cgacgtttct ggtctgcgga
      121 ctcggttcga tattgcaaag tttcggaccg cagggatttg gcgcgcgact gcccttcatc
      181 atggtgccgg gtggcgcgcc aatcgcgatc ttcctggcca tcgcggtgca ggccgatgtg
      241 caaaccgccg tgggcgcggt gctgctgacc gcgatcttct atttcgcggc cttgccggtt
      301 tttcggcggt tgttacggta tttcccgccc attgtcgtgg gaacgatgct gctgctggtt
      361 tcggtcaacc tggtgcgcat ctacggaggc accattaccg gaagaccggg aagcgagaac
      421 ttcgccgatc cgctgaatgt cggactggcg ctggcgacga tcgcgatgac ggtgctgttc
      481 gcctggggct tcaccggcac gctgcggcgc atctcggtca tgctggggct tgtcgcggga
      541 acggcgctgg cagcgatctt cggccagatc gacctgtcgg gcgtcggcaa cgggccgctg
      601 atcgcggttc cacagctgtt cccgttcgga atgcctaaat tcgacctcat cgccgcgctg
      661 ccactgatcg tgttctcgat catctcgatg gccgaggcca ccggccagac catcgccacg
      721 gccgagatcg tgggccggcg cgaagatgca cgcgcgatcg tgccgcgcac catccgcggc
      781 gatgcggtca tgtcgctggt cggcggactg ttcggcacgt cgctgatcat tacctcgggc
      841 gagaatgtcg gcatcgttcg tgcaaccaac gtcaagtcac gctatgtcac agcgacagcg
      901 ggcgtgatcc tgatcctgat cgcgctgctt gcacccgtgt cgcgcctggc ctcggcattg
      961 cccggcccgg tgatcggcgg aaccgccgtc gtcgtcttcg cgatcatcgg cgtcatcggc
     1021 atcgaccttc tgcgccgcac cgatcttcgt gaacacggcg cgatggtcac gctggcctcg
     1081 gggctggcga tggggatgct gccgattctc gtgcccggta tctacagcca gtttccgcaa
     1141 tggtcgcaga tgatcatcgg caacggactt gctgccggca ccatcaccgc tgccgtcgtg
     1201 aatgccatgt tccaccacgt ccgtcctgtt gccgagccaa gcctgcagga gagcaattga
     1261 tgagggatct tcccgaaacc ctgttcgagc ggaccgagat actgcttgtt ccaggccgga
     1321 tgctgcttga ggacggtcct gccagcggaa tggcggcgct gatccgcggc ggacgatttg
     1381 cggagatcgc gccggcggcg gacctgaccg cccgccatcc cggcctgacg cccgtcgatc
     1441 tgccggatca tctgatgatg cccggcttca tcgacactca tacgcatctg acccagtcgc
     1501 ttggcaagtc cctggtcttc ggcgagccgt cagaaatctt tcgccggatt tgggttccgc
     1561 tggagggcag tctggatcag cgcatggtct acctgtcctc gaagcttgcc gcgctggaat
     1621 gcctgcgcgg cggcttcacc tgcgcggtcg atgcgggcac gcgatctgcc gggcatctgg
     1681 aagcggtgaa gacggccgtg caagagacgg ggatccgctc ggtcatcggg ctgatctgca
     1741 acgatctggg cggtgcggcc gatgtgccgc cgccggaccg gatcatcgcg cgcgccgaag
     1801 cgcatctgca tgccggtgaa ggcgatccgc tgctgcatcc ctcgctggcc atatccatcc
     1861 ccgaagtcgg cagcgacggc atgctggcgc ggatgtcgca catggcggca gaggccgggg
     1921 cgatcttcca gacccatgtg aacgaacatc tggtggcggt cgaacggtca ctggtcgcca
     1981 atggccgccg cccgctggaa catctggccc atatcggcgc gctggggccg catgtcctga
     2041 tcgcgcatgc gacgcttgtg acgccgggcg aactgaacat cctgcgcgat accggcacgg
     2101 cggtcgcgta taacccggtg gcctcgatct ggaagggcaa tgccatcgcc ccggcgctgc
     2161 agatggccgc gctgggcatc cgtttcggac tgggcaccga cggcacccgc gcggacgggt
     2221 tccgcctgat ggacgcaggc gaatcgctgc aacgcgcagg ctatggcctt gcctcgggcg
     2281 acagttcttg cggtggcggc tggctgtggc tggcggcagc gacgggcatg gccgcagatg
     2341 cggccggact tggcgccgtc accggccgca tcgcgcccgg cctggccgca gatttcctgc
     2401 tggtcgatct ggaccgtccg gaattcaccc cctcgcacga tctgacatgg gaactggtcc
     2461 gctatggcaa ccgggaccag atcgacgcgg ttttcaccca aggccggctg cggctgtggc
     2521 agggctggcc ggttgactgg gacgcccgtg ccttgctgac cgagatccgc gaaaccacgg
     2581 ccggcgccat cgctgccgca ccgatcaccc gtatccatcc tcccgccgat taccgctgcg
     2641 caaaggcccc cgcgtgaccc tgttcctgat cctctctgcc gcggttttcg tggccgcctt
     2701 catccagggc gcgatcggaa tcggtttcgc gctgatcgtc gccccggtct tcggcatcct
     2761 ggcacctgaa tacctgccgg taacgctgtt gatcctgatg ctgccgctga atttccacat
     2821 cgcctggcgc gagcgcggcg atatcgatcg gctgggcacc ggctggatca cgctggggcg
     2881 gttcttcggc accttcgcgg gcctgtggat gctggccgcg ctgagcggtc gtcacctggg
     2941 cctggcggtc ggctggttca cggtgatcgc cgccgccgtg gctttgctgg cgcctcgatt
     3001 cgacccgaac cggccggcgg cactgggagt ggggctgttt accggcgtca ccgaaacggc
     3061 gaccggcatt ggcggcccgc cgcttgcgtt gctgtatcag cacgcgccgg ggccggtgct
     3121 gcgttcgacc gtcgccacct gcttcttcgt gggcgaggtg atctcgctgg cgatccttgc
     3181 catcatgggc atgttccaga tgtcgcaggc cagtgccgcg ctgatcctga tgccggcgat
     3241 catggcgggc agcgccctgt cgcgccggac gcacgcgcat ataggcggtg gcagcctgcg
     3301 ctatgcggtc ctgatcttcg cggttgtcag cggcgccttc ctgatcctga ggtcgtgacc
     3361 ggggcgcggc gtgtcatgca gggtcggcgc atgacccttc ttcctgtcgc gcaactacgc
     3421 cgatcacttc gcgcaagccc gctcgccgac aggttgtgaa aatgccgcgc aggcgttacc
     3481 atcctcttgt gattgccgtg cggatatttg gcctgcctct atccggacag ccaaatgtgg
     3541 ccgcgaagca tggaaagctt cgccagttga aagtccgacg atgccatatg tgacacagat
     3601 cccctcttca ttgatcacgg tgggcgtgga tgggtcgatt gccttcgtcc ccgatacatc
     3661 gctgctgaac gccttcgagt cctcgcagga attcgagagg tatgatgtcg aggcgacaaa
     3721 cggcacgacg ctgcagaacg gcgacgagat cgcaaccgtc acctccgacg gcacgacgct
     3781 ggcttctgga acctatcttg gttctgccga aatcaacaac gccctcgtca ccgtcggcat
     3841 tcccgcgctg gcgaatgtct cgttgcaggt gaaccccatt gccggggaca tcttcgaggg
     3901 cgatgacggg gaatactatt tcctctccga tgagcctgtg gacgatgccc atatcgccgt
     3961 gaccgcctcg atcacggtgg cgggcacgcc ggtcgaggtc acggccccca tttcggagat
     4021 caccgaccaa ctggccgacg ccgtcgccgc ggtgccgctt gcgggaccag cggctgccgc
     4081 cacgatcagg ggaaccggca acctgttgca gagcacggcg aacaccgcca tcgtcaccct
     4141 cgattacgac gcttccggcg aacttgtcct gagcgatgac gaggtggtgc cgtgtttcct
     4201 gcgtggcacg atgatcgaga cggcggatgg tccggttgcg gtggaatcgc tgaaggtggg
     4261 cgatctggtc cggaccatgg atcacggtct gcagccgctg cgctggatcg gctgcgcccg
     4321 tctggacgcc tctgcgctgc atcgcaaacc caagctgcgt cccataaggg ttcgcgccgg
     4381 ggcgcttgga caagggatgc cggaatcgga cctcttcctg tcgccccagc accgggttct
     4441 ggtccggtcc cagatcgctc agcggatgtt ctgtgccgat gaggtgctgg tcgccgccac
     4501 gcatctgacg gaaatcgacg ggatcgacgt cgtggaagac gacaccgatg tggtgtatta
     4561 tcacatgctg ttcgaacggc atgaggtggt gttttccaac ggcgcggcca ccgaggcgat
     4621 gtataccggt gaccaggcga tgaaagccgt cggagagatc gcgcgtgccg agatcttcgc
     4681 cctgtttccc caactgcagg atcgccgcga aagcgccgca agcgcaaagc cgatcgcgtc
     4741 cggcaggaaa gcgcgaaaca tggtggcgcg ccatgtcagg aacggacgcg aactggtcgc
     4801 cgagcccggg gcatgatctg aacgcaagct gtcggcgccg gacgatgccg gcgattccgg
     4861 gcagtgtccg gcggctgcac gatgcgatct tccccgacat cgccgatgtc gcgccccata
     4921 ccgacctttc ctcgttcgtc gcgccgtgct tctatccggg acatgtttcg cgttctggtt
     4981 ctgatcctcg cctttcccgc cgccgcgacc gagtttccgg cggcggtcgg cgatgatgcc
     5041 tatcggccga ccgatccgga tcgggtggcg ttggggcggc tgctgttctg ggatccgatc
     5101 ctgtcgggca accgcaacat cagttgcgcc acctgccaca atccgcgctt tggcaccggc
     5161 gacgggctgt cgctgggcat gggcgagggc ggggtggggc ttggaccgga caggatcgcc
     5221 gatccgcaaa acccgcccga gcagcgggtg ccgcgcaacg cgcccggact ctggaatctg
     5281 ggcgcgaccg aattcattcg ccttttcgac gacggccgga tcgaaagcct gcccgatggc
     5341 agcctgcgca cgccgatggg tccggagatg gtgcgcggct tcgacacgct tttgtcggca
     5401 cagacgatgt ttcccgtgct gtcggccgac gagatggccg ggcattattc cgagaacgag
     5461 gtcagccggg cagtccgaaa gggtctgatc accggcgagg acggcgcctg ggatctgatc
     5521 gcggcccgtg tccgtgccat ccccgaatac gccgcgatgt tcgaggacgc atttcccggc
     5581 gacgacaagc tggactttac cgacatctcg gacgccatcg cccagtttgt cgaggcggag
     5641 tggcggtcgg acacggcgcc cttcgacgcc tggttgcgcg gcaccggcga tctgcctgac
     5701 gctgccttgc agggggcgca actgttctac ggatccaccg gctgcgcgac ctgtcattcc
     5761 ggtcccttcc agaccgatca cgggtttcac gcgacgggcc agccgcaact ggggcccggc
     5821 aagcgcgcgc ggttcgaacg ccatgcccgc gacgacggcc gctttcgcgt caccggacgg
     5881 gaagcggatc gtttcgcgtt ccgcacgccg tcgctgcgca acgtgaccga gaccgggccc
     5941 tggggccatg ccggcgccta ttcggatctg cgccggttcg tccgcgatca cgccgccccg
     6001 cgtcaggcgc tgcgaaccta tgcccgcgac gcgacgctgc cggatatggg cgtcccgcag
     6061 caggacgact ggcgcgtgat ggacgatccg gccgaggtcg cggcgatttc ggcggcgatc
     6121 gaaggccgcg acatggtgct gaatgaccgg gatcttgatg ccttgatggc gtttctggcg
     6181 acgctgcggg acgatgcggc gctgaagggt cggctgggtc cgcccgcgac ggtgccgtcc
     6241 ggtctgccgg tggatcgctg accacggcgg gacgccatca tcaccgcggc gcgcgcggcc
     6301 gttatcatcg ccggatcagg accggtccgg gcccggttcg tgtccattcg ccgatgctgc
     6361 catccggcca ggtcacgcga atctcggcac tggtggcgtc accgattccg aaatgcaggg
     6421 gcgacaccgc gcccccggca tggccgccgc cgattgtcag ttcctgaatc tgcgttccgg
     6481 cctttgtgcg cagctcgacc caggcgccga cggcatcgcg attgccgccg ggctgcgaca
     6541 gcgataccga gaccgcgcga cccgccgtgg acagattgcg ccagacctcc agcggcgcga
     6601 ggcggttgac cacggccaga tccagccggc cgtcgccgtc caggtcgacc agcgccgcgc
     6661 cgcgcccgcg ccgcatcgag gcgaccccgg ccgacgcggc gacttcgcgg aaacgtcccg
     6721 cctcgttcag cagcaggttg ttgggatcat ccatcgccat gtccggcatc tgatcgacat
     6781 tgcccttggc gatgaacaga tccgcatcgc cgtcattgtc cacgtcgccc caagcggcgt
     6841 gccagccggt cgaggggcgt ccgtcatcac cgacatgggg ccgttgcgcg aagctgccga
     6901 tctcgtaggg tgccatttcc agcccggtcg gggtcgacag catggtcaac tgatcgccca
     6961 tcgaggtcag taccaggtcg ggcagcccgt cgccggtgat gtcgcgcgag gcgatgccca
     7021 ttccccagat cgacgggccc tcgaacccgt cttcgggccc gaggaaccgg ttctcggtag
     7081 gggaccacat ctgttcggcg ccgtcgcgaa cgtaatattg ccggtcgttc gacagccgca
     7141 aagtggcgcg gccgtcgcgg ttctcgtccg agaacaggat cgacagcgcg caaaagccgg
     7201 gcgtcaggat ggtttcggca taaccctctg cctcgggccg cagcagcaga ttgtcgtcgc
     7261 aggcctgaaa cggcccgtcg ggatcctggc ggtccacata atttccgaag gccagtgtcg
     7321 gccgcgtcct tcccgcttcc cagatcgccg agaatgcggt ggtccaggca tcgcccggcg
     7381 tcacgccgaa atcgtaaacg gcaaagccgc acgcgccgtc gcccttcagc gtcaggttcg
     7441 ggccgacccg caggacgacc agatccatcg ccccgtcgcc gtccagatca agcgcataga
     7501 cgccgctggc gccggtgatg accggaaatt cgccccgttc gaagaccatg ccgccgcggt
     7561 tgcgcagcag cgtcatgggt gacgtgcccc ccgccgccag caattccggc agcgaatcgc
     7621 cgtcgcagtc gaaggcggcc agaccgccgc cgacgaaatg ttcccagccg ccggtataga
     7681 catggtcggg caccttgacc gcctggaaga tcggatcggc ggcggcaacg ggcgtggcca
     7741 gcagcacaag cagcagccag cggatcatga catcagcctg ggcgtcaggt ccgacagcgc
     7801 cagcgccgcc gcgccgcgcg cccagaccag gtcgtcccag gcatggacct cgatcggggg
     7861 cggcgggttc agcgtcaggc tggccacctc ggccagcatt tcctcggcat agaggaaatc
     7921 atagcgcatc cggctgcccg acaggatgat gcggcgcgga tcgaaaagat tggcgacatt
     7981 ggccaggcca agcgccagat aacggccggc ccggtcaaag atcgcccgcg ccgcctcgtt
     8041 gccgtccttg gcctgccgga acagcgattc caggatctcg ccgcgccggg gcagttcgcc
     8101 gttcagggcg atcggcgcct cgcggaccag cgcgaaatcg gcgacatagg cttccaggca
     8161 gccgcgctga ccgcagcggc acagcgcacc atcaagctgc accttggtat ggcccagttc
     8221 catgcccagg ccatgcgcgc cgcgataggg tgcgtgatcg acgaccagcc ccagcccgac
     8281 cccgtattcg atggtcacga ccgcgaaatc cgacagcgac cgtcccttgc cgaaccacaa
     8341 ttcggccatg gtcagcaggt tcgcgtcgtt gtccaccgag gcgggaaggc ccagacgagc
     8401 cgagaccagc gccgccagat ccacgtcgcg ttcatcgacg atcggcgacc agcgcagccg
     8461 gccgctggcg tgatcgacca tgccgggcat tcccagcccc gcgcccagaa ccggcggcat
     8521 ctgcggtccg gccgcgcaga gcaggcgcga atagaggcaa tccacctcgt ccagcatgct
     8581 ggcgaccgaa cgggattccg cggcgcgggg cagggtggcc ccggcaactg gctgtcccgc
     8641 cagatcgacg agcacggccg aataatcgtg atcgctgacc ttgagtccgg cgaccaggcc
     8701 gcgctgcgca ttcaccgcca gcgtcaccgg cggccgcccg cgcccggcat ggcgcgcggc
     8761 gttttccggc tcgcgcagaa ggtcggcggc aagaagatcc gaaaccagcg gcgtgaccga
     8821 acccggggaa acccgcaagg ccttggcaag cgcggcccgg ctgattcggc ccgcggaccg
     8881 gatctgttcg tagatctgct gcttgagcga cagcaccccg gcctgccgcg ccccccgaag
     8941 gggaccgcaa cccggtgtgt ctgcctcggc aagcctggtc ctggcaggcc gggtgacatc
     9001 cagaactttt gttcgatccc gcaattaata actcccaccc cccggaaggc aggcagcctt
     9061 ccagcacgtc cttcgtcgga cgacgcaggc cgagtgaacg attcttgcct ccctgcgtca
     9121 aattaatttt gacaatcgta gttcaaaaga aatacgaata ctgtccgtca ctaatga
//
LOCUS       DTVW01001049            1128 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2292139, whole
            genome shotgun sequence.
ACCESSION   DTVW01001049 DTVW01000000
VERSION     DTVW01001049.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1128)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1128)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1128
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2292139"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..437
                     /locus_tag="EYO87_13785"
     CDS             <1..437
                     /locus_tag="EYO87_13785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018001265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HIC67042.1"
                     /translation="AVDYADPPLRFEAGTPGIVNQIGLGAALEYLMDLGMDNIAAHER
                     ILRDHARDRLRSLNWLNVQGDAPGKGAIFSMTMQGAHAHDISTILDKKGIAVRAGSHC
                     AMPLMDFYGINASARASFAMYNTTGDVDALVEALSFCRELFA"
     gene            543..>1128
                     /locus_tag="EYO87_13790"
     CDS             543..>1128
                     /locus_tag="EYO87_13790"
                     /inference="COORDINATES: protein motif:HMM:PF01266.22"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HIC67043.1"
                     /translation="MSEILVLGAGMVGVTTALALQERGHDVMIVDRNAPGRETSYGNA
                     GLIQTEAVEPYAMPLAPGALIQIAMGRGYDVKWNIPGLLSQAGAVWAYARNSLPAAHK
                     RASQVWGRLIRQSTDRHGPLIAAAGADNIIRRDGYIEIHRTPRRMDKARKAAERFRTE
                     FGVEAKLLDGRQLRALEPSIKIAVEGATHWSDSWN"
BASE COUNT          210 a          368 c          366 g          184 t
ORIGIN      
        1 aggcggtcga ctacgccgat ccgccgctcc gcttcgaggc cggaacgccc ggcatcgtca
       61 accagatcgg tctgggcgct gcgctggaat acctcatgga tctgggcatg gacaacatcg
      121 ccgcgcatga acggatcctg cgcgatcatg cccgcgaccg gctgcgcagc ctgaactggc
      181 tgaacgtgca gggggacgcg ccggggaagg gggcgatctt ctcgatgacg atgcagggcg
      241 cgcatgccca cgatatctcg accattctcg acaagaaggg catcgcggtc cgcgccggca
      301 gccattgtgc catgccgctg atggacttct acggcatcaa cgcctcggcc agggccagct
      361 tcgcgatgta caacacgacc ggcgatgtgg acgcgcttgt cgaagcttta agcttctgcc
      421 gcgagctttt cgcctgattc ttgcaaagtt ccggtccgtc gccgaagatc gcccgacatg
      481 tcttgcggtg ccgcggcgaa atcgggcatc gcttgcgtca acccgaagag gaggcagcca
      541 ccatgtccga gattctggtt cttggcgccg gcatggtcgg ggtcaccacc gcgctggctt
      601 tgcaggaacg cggccacgac gtgatgatcg tcgaccgcaa cgcgccgggc cgcgagacaa
      661 gctatggcaa tgccggcctg atccagaccg aggcagtcga accctatgcg atgccgctgg
      721 cgcccggcgc attgatccag atcgcgatgg ggcggggcta tgacgtcaaa tggaacattc
      781 ccggattgct gtcgcaagcg ggcgcggtct gggcctatgc ccgcaattcg cttcccgcgg
      841 cccacaagcg cgcctcgcag gtctggggca ggctgatccg gcaatcgacc gaccgacatg
      901 gccccctgat cgcggccgcg ggcgctgaca acatcatccg ccgggacggc tatatcgaga
      961 tccaccgcac gcccaggcgg atggacaagg cccgcaaggc ggccgaacgt ttccggaccg
     1021 aattcggcgt cgaggcgaaa ttgctcgacg gccgccaatt gcgggcgctg gaaccctcga
     1081 tcaagatcgc ggtcgaaggc gccacccact ggagcgacag ctggaact
//
LOCUS       DTVW01001050            1220 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2292920, whole
            genome shotgun sequence.
ACCESSION   DTVW01001050 DTVW01000000
VERSION     DTVW01001050.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1220)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1220)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1220
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2292920"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..250
                     /locus_tag="EYO87_13795"
     CDS             <1..250
                     /locus_tag="EYO87_13795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_354164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="formate dehydrogenase"
                     /protein_id="HIC67044.1"
                     /translation="MEFCAIESCGKCTPCRIGAVRGVETIDRIAAGDPAAAELLTDLC
                     ETMKDGSLCALGGFTPFPVMSALRHFPDDFATRKEAAE"
     gene            247..>1220
                     /locus_tag="EYO87_13800"
     CDS             247..>1220
                     /locus_tag="EYO87_13800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008885701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase subunit alpha"
                     /protein_id="HIC67045.1"
                     /translation="MKDFIIPQFPPGSDPQDERDMGTPARSGAPVSLSIDGFAVTVPE
                     GTSVMRAAAEAGIMVPKLCASDNMEAFGSCRLCVVEIEGRKGTPASCTTPVAEGMVVH
                     TQSGKVKRIRKGVMELYISDHPLDCLTCAANGDCELQDAAGQVGLRDVRYAPGQNHFD
                     PSGSGARSQAEARLRMPVDQANPRYVPKDESNPYFTFDPSKCIVCSRCVRACEEVQGT
                     FALTIEGRGFDSKVSAGAATDDFLHSECVSCGACVQACPTATLQEKSVIEMGTPHRSV
                     ITTCAYCGVGCSFKAELNGDQLVRMVPYKHGKANRGHSCVKGRFAYGYA"
BASE COUNT          208 a          402 c          399 g          211 t
ORIGIN      
        1 gatggagttc tgcgccatcg aatcctgcgg caaatgcacg ccctgccgca tcggcgcggt
       61 gcgtggggtc gagaccatcg accgcatcgc cgccggcgat cccgccgccg ccgaattgct
      121 gaccgatctg tgcgagacga tgaaggacgg ctcgctctgc gcgcttggcg gcttcacccc
      181 gttcccggtc atgtccgcac tgcgccattt ccccgacgac ttcgcgaccc gcaaggaggc
      241 cgccgaatga aggacttcat catcccgcaa ttcccgcccg gttccgatcc gcaggacgag
      301 cgcgacatgg gaacgcccgc ccggtcgggc gcccccgtca gcctgagcat cgacggtttc
      361 gcggtgacgg tgcccgaggg cacttcggtc atgagggccg cggccgaggc cgggatcatg
      421 gttcccaagc tctgcgccag cgacaatatg gaagcctttg gatcctgccg cctctgcgtc
      481 gtcgagatcg agggccgcaa gggcacgccc gcatcctgca ccacgcccgt ggcggaaggc
      541 atggtcgttc acacccagtc cggcaaggtc aagcgcatcc gcaagggggt gatggagctg
      601 tatatcagcg atcacccgct ggattgcctg acctgcgcgg ccaatggcga ttgcgaattg
      661 caggatgcgg cggggcaggt gggtctgcgt gacgtgcgct atgcgcccgg ccagaaccat
      721 ttcgatccct cgggcagcgg cgcgcgcagc caggccgagg cgcggctgcg gatgccggtc
      781 gatcaggcca atccccgtta tgtgccgaag gacgaaagca acccctattt cacgttcgat
      841 ccgtcgaaat gcatcgtctg ttcgcgctgc gtccgggcct gcgaagaggt gcagggcacc
      901 ttcgcgctga ccattgaggg gcgcggcttc gacagcaagg tcagcgccgg ggcggcgacc
      961 gacgatttcc tgcattccga atgcgtcagt tgcggtgcct gcgtgcaggc ctgtccgacc
     1021 gcgaccttgc aggaaaaatc cgtgatcgag atgggcacgc cgcatcggtc ggtcatcacc
     1081 acctgtgcct attgcggcgt cggatgcagc ttcaaggcag agctgaacgg cgatcagctt
     1141 gtccgcatgg tcccctacaa gcatggcaag gcgaaccggg gccattcctg cgtcaagggc
     1201 cgcttcgcct atggctatgc
//
LOCUS       DTVW01001051            3650 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2293503, whole
            genome shotgun sequence.
ACCESSION   DTVW01001051 DTVW01000000
VERSION     DTVW01001051.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3650)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3650)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3650
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2293503"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(32..1624)
                     /locus_tag="EYO87_13805"
     CDS             complement(32..1624)
                     /locus_tag="EYO87_13805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013961422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family transposase"
                     /protein_id="HIC67046.1"
                     /translation="MSEDADILTDDPTVLKAMIVALQTENARMSATLQAHEQLVQALR
                     LRIARLQKQAFGKSSEKIEREIAQLELALEDLLIAVAEQRNEPAGEADAEPPAADAGS
                     AEVKPRRRPRVSDETPRERRELDPGTCCPDCGGDLRVVGEDVSELLDMVAAQMKVIEI
                     ARVKKSCRRCERMVQPAAPSRPIPGSMAGPGLLAHVLVSKFDDHVPLYRLNEIYARMG
                     ADVPDSTLLDWCGRAMKVLAPIIERIEAEVMAAPVLHADDTPIRVLDRSRRDRGLGKG
                     VKQGRVWAYVSDQRPWAGTAPPGVVYRFSPDRKGEHPRQHLQNSSGILQADAYAGFGQ
                     LYERRADGSSQFREAACWAHLRRDFHDVWEATKSEIAREALDRIGKLYDVERRIAGQP
                     ADLRKAAREQHSRPQVDAFKAWAEAQLARIPGKGDLAKAFRYGLSRWPSFELFLEDGR
                     IGIDNNPAERAMRPIGVGRRNWLFAGSDSGGETLARAMTLIETAKMSGLDPQAWLADV
                     LDRIHDHKINRLDELLPWNWKS"
     gene            complement(1687..1980)
                     /gene="tnpB"
                     /locus_tag="EYO87_13810"
     CDS             complement(1687..1980)
                     /gene="tnpB"
                     /locus_tag="EYO87_13810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017980723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family insertion sequence element accessory
                     protein TnpB"
                     /protein_id="HIC67047.1"
                     /translation="MRKGIAGLSTMAQDVLRQKPASGAVFAFRGRKGDRLKLLYWDGQ
                     GFCLYYKVLERGRFPWPSTEGGIARLTSAQLAMLWEGIDWRRPDWGAPPARVG"
     gene            complement(2031..2399)
                     /locus_tag="EYO87_13815"
     CDS             complement(2031..2399)
                     /locus_tag="EYO87_13815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014332409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HIC67048.1"
                     /translation="MLGEVLGVERRRRWSEDEKLEILSEVGVGGVSVTQVAQRHEITR
                     SQIYGWRRDLKKKGLWSPDRGAVFLPVDFSSCPEPASAPAPSRSVPVELRLSNGRCLR
                     FDSGIDEEALTRLIRAVDAA"
     gene            complement(2531..2845)
                     /locus_tag="EYO87_13820"
                     /pseudo
     CDS             complement(2531..2845)
                     /locus_tag="EYO87_13820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008335649.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="replication protein C"
     gene            3169..3561
                     /locus_tag="EYO87_13825"
     CDS             3169..3561
                     /locus_tag="EYO87_13825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67049.1"
                     /translation="MRFSRTLAVMAIAAVSMAAVPASADPGHGKGKARGDHHNGFAGH
                     CPPGLAKKNPPCVPPGQARKTYDHYGSRIGDILRIGDYVVIRDPRRLNLEPRDDWRYY
                     REGNRAYRVDRDTRKILSVINLIDAFTN"
BASE COUNT          673 a         1227 c         1094 g          656 t
ORIGIN      
        1 gtaaccggcc ggttgatacc gtcgcctgat cctacgactt ccagttccac gggagcagtt
       61 cgtcgaggcg gttgatcttg tgatcgtgga tacggtcgag gacatcagca agccacgctt
      121 gcgggtccag cccgctcatc ttcgccgtct cgatcagggt catggcccgg gcgagggttt
      181 ccccgccgct gtcggagcca gcgaagagcc agttgcggcg gccaacgccg atcgggcgca
      241 tggcgcgctc ggccgggttg ttatcgatcc cgatgcgacc atcctcgagg aacagttcga
      301 atgagggcca gcgggagagc ccgtagcgga aggccttcgc gagatcgccc ttgcctggga
      361 tgcgcgccag ctgggcctcg gcccatgcct tgaaggcgtc gacctggggg cgggagtgct
      421 gctcccgtgc ggccttgcgc aggtcggcgg gttggccggc gatccgccgt tcgacatcgt
      481 agagcttccc gatccggtcg agcgcctccc gcgcgatctc ggacttcgtg gcctcccaga
      541 catcgtgaaa gtcacgccgc agatgtgccc agcaggccgc ctcacggaac tggctactgc
      601 cgtccgcgcg gcgctcgtag agctggccaa agcctgcata ggcgtccgcc tgaaggatac
      661 cgctgctgtt ttgcaggtgc tgacgcggat gctcgccttt ccggtccggc gagaagcggt
      721 agaccacgcc tggcggcgcc gtgccggccc agggcctctg gtcggagaca taggcccaga
      781 cccgcccctg cttgaccccc ttgccgaggc cgcggtcgcg acgggagcgg tccaggacgc
      841 ggattggcgt gtcgtccgca tgcagcacgg gcgccgccat gacttcggcc tcgatcctct
      901 cgatgatcgg cgcgagcacc ttcatcgccc ggccgcacca gtccagcagt gtgctgtcgg
      961 gcacgtccgc acccatgcgc gcgtagatct cgttgaggcg atagagcggg acatggtcat
     1021 cgaacttgga gaccagcaca tgcgccaaca ggcccggtcc ggccatgctg cccggaatcg
     1081 ggcggcttgg cgccgcgggc tgcaccatcc tctcgcagcg gcggcaggac ttcttcaccc
     1141 gtgcgatctc gatgaccttc atctgcgcgg cgaccatgtc gagaagctcg ctcacgtcct
     1201 cgccgaccac gcgaaggtca ccgccgcaat caggacagca ggtgccgggg tcgagttccc
     1261 gtcgctcccg cggggtctcg tcggagaccc ggggcctgcg gcggggcttc acctcagcgg
     1321 atccggcatc ggcggcggga ggttcggcat ccgcttcgcc agccggttca ttgcgctgtt
     1381 cggcgacggc tatcagcagg tcttccagcg ccagctcgag ctgggcgatc tcccgttcga
     1441 tcttctccga ggacttgccg aaagcctgtt tctgcaacct ggcgatccgc aggcgcagcg
     1501 cctggaccag ctgttcgtgg gcctgaagcg tggccgacat gcgcgcattc tccgtctgaa
     1561 gcgcgacgat catcgccttc agaacggtgg ggtcatcggt gagaatgtcg gcgtcttcgg
     1621 acatgccgac aaataccacg ccgtgtcgtc aaaagccaat aaaacaaagg gaattagagg
     1681 ggtaaatcac cccacccgtg ccggcggcgc accccagtcc ggacgccgcc agtcgatccc
     1741 ctcccagagc atggccagct gtgccgaggt cagccgggcg atgccacctt cggtgctggg
     1801 ccaggggaag cgaccgcgtt cgagcacctt gtagtagagg cagaaaccct ggccatccca
     1861 gtaaagcagc ttcagccggt cacctttgcg cccccggaac gcaaagaccg cgccgctcgc
     1921 gggcttctgg cgcaggacat cctgagccat ggtcgacagc cccgcgatgc ccttcctcat
     1981 gtcggtggcg ccgcaggcca ggtagacccg aaccccggtt cccggcccga tcacgccgcg
     2041 tccaccgccc ggatcaaccg ggtcagcgcc tcttcatcga tcccgctgtc gaacctcagg
     2101 cagcgaccgt tgctcagccg cagctcgacc ggaactgacc gagacggcgc gggggcgctt
     2161 gccggctccg ggcacgaact aaaatccact ggcaggaaaa cggccccgcg atccggcgac
     2221 cataggccct tcttcttcag atcacgccgc cagccgtaga tctgggaccg cgtgatctcg
     2281 tggcgctgcg cgacctgcgt caccgacacc ccgccgacgc cgacttccga caggatctcc
     2341 agcttctcat cttcgctcca ccgtcggcgc cgttcgacac ccagaacctc gcccagcatg
     2401 gctcctccga ataagacacg tgcataacga cgtcgttatg cacgtgtctt acctcggaac
     2461 cccagcctca ggcaggcggc cccaatcggt cggttactgc cttgccgcca agtctgcaat
     2521 agaagcagta ttagaggtgc agatctcttg cccccgcctt ctcaaccatg ccgcacagat
     2581 atccatacgg cgaggcaacc tcactcgtgc tatgcttttc gaacacgagc ggaaacgctg
     2641 ccgttgccac ctgtgtaccc attcgctcct gcgccacgtt ccagacatgc tccgaaattc
     2701 ccaccatcgg cctgagtggt tcagcaaccc gatgcagatc accccaatcc ttgaaaaatt
     2761 cgcccgtgtt gcgcgcccaa gacgcgaact cgggacacgc ctgcatgctt gtcggcagat
     2821 caagcacggt cctgttctcg cgcaaagcca ggcaggaaca acgcaagaag cgtgatgatt
     2881 gcaccggaca cgctattggg tttcggctcc agcaccgcac cgagataagc gattaaggcc
     2941 gcgagcgcca cgtaccagcc agcccgcatc atgccgagtg cgaaactgac ttagctcaaa
     3001 gccgggccgg gcaggcttat caagccatcc tggccttgtt cgcaggcggc aacgaggcag
     3061 gcagaagacc gccgtttctg ccgcattatg gcctggtgat gttcgttatg cctgacttct
     3121 gtcgcgctca gcactatcta tccggcaaca cttgaagcgg agagagctat gagattttct
     3181 cgaacactgg ccgtaatggc gattgcagcc gtatcgatgg ccgccgtgcc tgcatcggca
     3241 gaccctgggc acggcaaggg caaggcgcgc ggcgatcacc acaacggatt tgcaggacat
     3301 tgcccgccgg gacttgcaaa aaagaacccg ccctgtgtgc cgccggggca ggcacgcaag
     3361 acctatgatc actacggctc tagaatcggg gacatccttc gcatcggtga ttacgtggtt
     3421 attcgcgatc cccgtaggct aaatctagaa ccgcgtgacg attggcgcta ttatcgcgag
     3481 ggaaaccggg cctatcgggt tgatcgtgac accagaaaga tcctctccgt catcaacctt
     3541 atcgatgcct tcacaaactg agccgtcggc gttgatgatc ggctctgact cagttttggt
     3601 gcagattgac aatctgccgc cgtactcacc cgacttgaac ccaatcgaaa
//
LOCUS       DTVW01001052            4036 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2293816, whole
            genome shotgun sequence.
ACCESSION   DTVW01001052 DTVW01000000
VERSION     DTVW01001052.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 4036)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4036)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4036
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2293816"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..264
                     /locus_tag="EYO87_13830"
     CDS             <1..264
                     /locus_tag="EYO87_13830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009803545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67050.1"
                     /translation="PAAKRDAGLVNEGPRLVVTPRAVMDFDKTTLRMRLKSVHAGNTP
                     EEVQRHTGFDLAIRGEVPQTRPPTEEELRVLRERIDTSGALRA"
     gene            310..1281
                     /locus_tag="EYO87_13835"
     CDS             310..1281
                     /locus_tag="EYO87_13835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009803544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TAXI family TRAP transporter solute-binding
                     subunit"
                     /protein_id="HIC67051.1"
                     /translation="MIQRKLTGYRAAVGAIAAMGAIALGGAASAKDLTMGTTSPTSSH
                     FTISVAMSKAIETGMEGTNVSVIETGASVDNVLRLARDEIDLGLATTDILISARNGTG
                     KFEGNAIPDTVALYPYSASILLIAVTEESGVTTLDELDGKKFNPGIRGSAAETLTTGV
                     LSMFDINADLVHGAVGDAVEGIKNRQIIGYSKYGAANSVDATLQELMTSTKMRLIGFT
                     EEQEKAATEAMEGVGFTTLPAGLIPGSEEMRVPKLNVFFLTRTGVMDDQSAYDIARSI
                     HQNMDLLVEAWPQLADYDIAADAVATIETGIPYHPGAERYWREAAGS"
     gene            1434..3314
                     /locus_tag="EYO87_13840"
     CDS             1434..3314
                     /locus_tag="EYO87_13840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009803543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter fused permease subunit"
                     /protein_id="HIC67052.1"
                     /translation="MLAAFVALHFYNALFGQFEPLVQRPIFIGFGIGGAFFLYAARAS
                     RTGARSGIERAVDIMLGLLAFAVCLYVILNRDRFSDIMVRYGPIDKAAGLIAVLLTLE
                     AARRVIGWFLPLLALCTVIYFYFGYDLIDGAWRPPRVSARTAVETFYSSTTGLFGYLA
                     DIGARVIVIYVLLGALLLSTGATDAFMKMATWIAGRTYGGPAKVCALSSAMFGTVTGS
                     AVANVMATGSITIPTMKRLRYPPAFAGAVEAVASSAGQLTPPVMGAAAFIMAEFLNIP
                     YTDIVVAAIGPAFLYYLAVWLGVDLYARRTGLQPTPRSEMPEPAEFLAPDKSIPLFLP
                     IAAMVYFLFNGYTPSFAGAGAVIILVLACVVVRPFARDGREQGVLASWAKLARDLYEG
                     MIEAGRALVMIAALLACAAIVVKVLTATGAGVKVSNLLFSVSGQGLIVALLLAAVLAI
                     LLGMDVPTTASYVLAAAIAAPSLVRLGLPELTAHLFVFYYAILSAITPPVCASVYAAA
                     ALAGANFWRVAGRALMLAGAIYVVPFLFVFRPGILAQGGTVQILLDMGVACAAVFAVS
                     VGTSGWFRGKVPVIGRLLFLSAAGLLFYAAPAADIVGGLALAGLLAWRFLRGAPQPGR
                     AG"
     gene            complement(3398..3802)
                     /locus_tag="EYO87_13845"
     CDS             complement(3398..3802)
                     /locus_tag="EYO87_13845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009504593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Zn-ribbon domain-containing OB-fold protein"
                     /protein_id="HIC67053.1"
                     /translation="MSIEKPLPVIDHDSAPYWEATREGRLDIPLCGDCGKHHFYPRSI
                     CPYCHSDNLRFNTVSGRGKVHTFTIARRPAGPTFADDVPYVVALIELEEGPRMMSRIQ
                     TGDPEKVHIGAKVEVTFVKATDEVTFPYFKMT"
     gene            complement(3807..>4036)
                     /locus_tag="EYO87_13850"
     CDS             complement(3807..>4036)
                     /locus_tag="EYO87_13850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009803541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="thiolase"
                     /protein_id="HIC67054.1"
                     /translation="SGQRTAPGGAFPMNTSGGGLSALHPGMFGMFLLIEAVRQLRGEG
                     GERQVKGAETALVHGTGGTLSSGATVILQKG"
BASE COUNT          709 a         1197 c         1309 g          821 t
ORIGIN      
        1 cctgccgcga aacgcgacgc cgggctggtc aatgaaggac cgcgcctggt ggtgacaccg
       61 cgagcggtta tggatttcga caagacgacg ctgcgaatgc gactgaaatc ggtgcatgcg
      121 ggaaatacgc ccgaagaggt ccagcgtcat acggggttcg atctggcgat cagaggcgag
      181 gtgccgcaaa cgcggccacc aacggaggaa gaattgcgcg ttctgagaga gcggatcgat
      241 acatcggggg ccctgcgtgc ttaagcgacc gggctgacgt tactttaaag gcaaaaacgg
      301 gaggataaaa tgatccaacg caagttgacc ggataccggg cggcggtggg tgctatcgcg
      361 gccatgggcg cgatagccct tggcggcgcg gcatctgcca aggatctcac gatgggcacg
      421 accagcccga cgtcgagcca tttcaccatt tcggttgcga tgagcaaggc gatcgagacc
      481 ggcatggaag gcaccaatgt cagcgtgatc gaaaccgggg ccagcgtgga caatgtgctg
      541 cggctggcgc gcgacgagat cgaccttggg cttgccacca ccgacattct gatctccgcc
      601 agaaacggga ccggcaagtt cgaaggtaac gcaatcccag atacggttgc gctttatcct
      661 tacagcgcct cgatcctgct gatcgcggtc accgaagagt ctggtgtgac gacgctggac
      721 gaactggacg gaaagaagtt caatcccggc atccgcggat cggcggccga gacgttgacg
      781 accggtgtcc tgtccatgtt cgatatcaac gcggacctgg tgcatggcgc cgttggcgac
      841 gcggtggaag gcatcaagaa ccgccagatc atcggttaca gcaaatacgg ggccgcaaac
      901 tctgtcgatg caaccctgca agagttgatg acaagcacca agatgcggtt gatcggcttc
      961 accgaagagc aggagaaagc ggcgacagaa gccatggagg gcgtcggttt cacgactctt
     1021 cccgcagggc ttattccggg atccgaggaa atgcgggtac ccaagctcaa cgtcttcttc
     1081 ctgacccgca ccggcgtcat ggatgaccag agcgcctatg acatcgctcg cagcatccac
     1141 cagaacatgg acctgctggt cgaagcctgg ccgcagcttg cggattacga catcgccgcc
     1201 gatgccgtcg ccacaatcga gaccggtata ccctatcatc caggtgcgga acgttactgg
     1261 agagaggcgg ccggaagctg accggaatcg cgggccgtca cgacggcggc cataggctga
     1321 tccagacggg gtgctgcggg caccccgccg ttaccgctct cggagagaac atgacgcaga
     1381 catcgaccgc aatacccaat tgggaacggc gcggagggca ggcgcttgga gtattgttgg
     1441 cggcattcgt cgctctgcat ttctacaatg ccttattcgg gcagttcgaa ccgctggttc
     1501 agcggccgat ctttatcggt ttcggtatcg gcggcgcgtt ctttctttat gcggcacgcg
     1561 cctcgcggac cggtgcgcga agcgggattg aacgggctgt ggacatcatg ctgggactac
     1621 tggcgttcgc ggtttgcctc tacgtgatcc tgaaccggga tcgcttttcg gatatcatgg
     1681 tgcgctatgg gccgatcgac aaggcggcag gtctgatagc tgttctgctg accctcgagg
     1741 ccgcgcgccg ggtgatcgga tggttcctgc cgctgctggc cctttgcacc gtgatctatt
     1801 tctatttcgg ctatgacctg atcgacggcg cctggcgccc gccgcgcgtt tcggcacgta
     1861 ccgctgtcga gacattttac agctcgacca ccggcctgtt cggctacctt gcggatatcg
     1921 gggcacgggt catcgtgatc tatgtgcttc tgggggcgct cctgctgtcg accggggcaa
     1981 cggatgcttt catgaaaatg gcaacgtgga tcgccggtcg aacgtatggc ggcccggcaa
     2041 aggtctgtgc cctgtcttcg gcgatgttcg ggacggtgac cggttcggca gtggccaacg
     2101 tcatggcgac cggctcgatc accattccca cgatgaagcg gctgcgctat ccaccggcct
     2161 ttgccggggc ggtcgaggcc gttgcctcct ccgccggcca gcttacgccg ccggtgatgg
     2221 gggcagcggc cttcatcatg gctgagttcc tgaacattcc ctataccgac attgtcgttg
     2281 cggcgatcgg tccggcattt ctctactacc tggcggtatg gctcggggtg gatctctatg
     2341 cgcgtcgcac agggttgcaa ccgacaccga ggagcgaaat gcccgaaccg gcggaattcc
     2401 tcgcaccgga caagtcaatt cccttgtttc ttcccatcgc ggcgatggtc tacttcctgt
     2461 tcaacggcta cacgccgagc tttgcaggtg ccggtgctgt tatcatactg gttttggcct
     2521 gtgtggtggt gcgcccgttc gcgcgtgacg gaagagagca gggcgtgctg gcctcttggg
     2581 ccaagctggc gcgcgacctc tatgagggga tgatcgaagc agggcgggcg ttggtgatga
     2641 tcgccgcgct gctagcctgc gccgccatcg tcgtcaaggt tctgacggcg acgggtgccg
     2701 gggtcaaagt ctcgaacctg ttgttctctg tgtccggtca ggggttgatc gtggccctgt
     2761 tgctggcggc ggtgctggcg atcttgctgg gtatggacgt gccgacgacg gcctcctatg
     2821 tgctggcggc ggcaatcgcc gcgcccagtc tcgtgcggct tggcctaccc gaactgacgg
     2881 ctcatctttt tgtcttctac tatgcgatcc tgtcggccat cacgccaccg gtctgcgcca
     2941 gtgtctatgc cgccgccgcc ctggcagggg ccaatttctg gcgggtggcg ggtcgcgcgc
     3001 tgatgttggc cggagcgatc tatgtggtgc cgtttctctt tgtgttccgg ccgggcatac
     3061 tggcccaggg cggcacggtg caaatcctac tggatatggg cgtggcctgc gccgcggttt
     3121 ttgccgtcag cgtcggcaca agcggctggt ttcgtggaaa ggtgccggtc atcggccggt
     3181 tgctgttcct gtcggctgcc ggcttgctgt tttacgccgc gcctgcggcc gacatcgttg
     3241 gtgggctggc gctggccggg ctcttggcgt ggcggttttt gcgcggagca ccgcagcccg
     3301 gccgcgccgg gtgacctccg aaaagcgaag agccaccgca gacaacctct gcgacggctc
     3361 ttccacattc ggccccgaag tggcggtgcc tctggcctca ggtcattttg aagtagggaa
     3421 aagtcacttc gtcggttgcc ttgacgaacg tcacttccac cttggccccg atatgaacct
     3481 tctcggggtc gccggtctgg atccggctca tcatccgggg gccttcctcc agctcgatca
     3541 atgccacgac atatggcacg tcatccgcga aagtcggccc tgccggacgg cgcgcgatgg
     3601 tgaaggtatg caccttgccg cgtccgctca cggtgttgaa gcgcagattg tcggaatggc
     3661 aatacgggca aatagagcgg ggatagaaat gatgtttgcc gcaatcgccg caaagcggga
     3721 tgtcgaggcg gccctcgcgc gtggcctccc aatagggggc actgtcatgg tcgatcaccg
     3781 gaagcggttt ttcaatgctc atcgtcttag cccttctgca aaatcacggt cgcacctgag
     3841 gaaagcgtac ccccggtacc atgcaccaga gcggtctcgg cgcccttgac ctggcgctcg
     3901 ccgccttcgc cgcgaagctg ccggacggcc tcgatcagca ggaacattcc gaacatgccc
     3961 ggatgcagcg ccgagaggcc gccgccgctg gtgttcattg ggaacgcccc gcctggtgcc
     4021 gtgcgctggc ccgaca
//
LOCUS       DTVW01001053            7018 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2294427, whole
            genome shotgun sequence.
ACCESSION   DTVW01001053 DTVW01000000
VERSION     DTVW01001053.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 7018)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7018)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7018
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2294427"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..959)
                     /locus_tag="EYO87_13855"
     CDS             complement(<1..959)
                     /locus_tag="EYO87_13855"
                     /inference="COORDINATES: protein motif:HMM:PF07732.13"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67055.1"
                     /translation="MPGCRPVPSRAAGPRGARPRRLAGSRKSSFSCDTASSCPARSAD
                     LSAEPFRGWLQPSDSRPGQPVARHVLHSHSKGSDHQMALIPGISRRRFLSTAGQLAAV
                     TALGSFGAQAWAAQGARRLTAGTRTIEVQGRAATVFGLTDERGRQGLTLDIADGFDVA
                     LANEAGVPTVIHWHGLTPPFGQDGNTLSQEPIPAGGTKNFAFDLPRGGTNWMHSHFGL
                     QEAQLMAAPLILRDGAADRQEVVMLLHDFSFTSPEELMARLVGDDAGRIGSGMAAMQH
                     GMVRGPSQDGTGMAGMDPSGMEGMDSMGMTMTMPMSGMDQDDMP"
     gene            complement(1159..2034)
                     /locus_tag="EYO87_13860"
     CDS             complement(1159..2034)
                     /locus_tag="EYO87_13860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009503819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF305 domain-containing protein"
                     /protein_id="HIC67056.1"
                     /translation="MGYGRFAAMIATSTVVMFGLMYLNTYLLSHVFWSETRAYMALLM
                     GATMAVIMLAFMLSMYSSKSLNIAIFLGAGVVFGVSLWLVRSQFTVGDTSYMRAMIPH
                     HSIAIMTSSRADISDPRVRKLADEIIYAQDKEIAEMRYLIADIEASGDATQQENPPAA
                     QVVSVDQALSSAEVSVLDPEFLTNDDIAQIFPNGAACTFTYTETSQPVLAIGQDGAAL
                     TKISGNLIRLDAEDAAAVATGPALTTAGMAMRVSAPGEGAGLEAGSGRQEADLVINLD
                     AGLQAGYRGLYGCNA"
     gene            2158..2451
                     /locus_tag="EYO87_13865"
     CDS             2158..2451
                     /locus_tag="EYO87_13865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013165313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HIC67057.1"
                     /translation="MAAMKPNKQRALDRLARIEGQVRGIARMVEEDRYCVDILSQTAA
                     VHSALMGVERMLLENHARHCVEAAIASGEPDEQRAKFNELIALLQRTQLQGRT"
     gene            2779..3438
                     /locus_tag="EYO87_13870"
     CDS             2779..3438
                     /locus_tag="EYO87_13870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009503854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HIC67058.1"
                     /translation="MLTRRHFIQTTTTLFSASISGPLFASTWPDAAQKAAWDAEVTPP
                     GYDAATTNPWGLHPRYLPQRVVANDGLVPGDIHVDAVAKYLYHIETGGTAMRYGVAIG
                     RGDLYEPGVYTIKRKVEWPHWTPTQNMIEREPEIYAKFENGMEPGPENALGSRALYLY
                     VGDRDTMLRIHGTPFPKSIGSRASSGCVRMVMVHINDLYPLVELGSTAFLYSASDSVT
                     S"
     gene            complement(3494..3766)
                     /locus_tag="EYO87_13875"
     CDS             complement(3494..3766)
                     /locus_tag="EYO87_13875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67059.1"
                     /translation="MKRKPYFVLATVLVSTACTSMTPRTQVAETAPDALPPELYALAA
                     PGQDIASARLLPQDNCYWYEHRGQVETTLLPLTTADGRPICRQPRA"
     gene            4198..6384
                     /locus_tag="EYO87_13880"
     CDS             4198..6384
                     /locus_tag="EYO87_13880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007803450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation-translocating P-type ATPase"
                     /protein_id="HIC67060.1"
                     /translation="MAILNKVVGPKIGGAEHLAFDVINGRMTILDSADTISDDEVTKL
                     VASTGMSARPWSSENAAEDQAAHLKRQKFFTALSGGFWALGFIWHGVESGTAGLVRIF
                     SDHGETPMPLIEIGAFFLAIVFGAWLVAPKAWSSARRMSPDMNLLMIVAVSGAILLGA
                     YFEAATVAFFFSLSLYLESWSVGRARNAVSALLDLAPPTARVIRDDGTEADVPAAQVA
                     VGDRFVVRGGDRIPLDGEVTEGVGAVNQAPITGESALVPKEPGEDVYAGTINGEGTLT
                     VRATKAASDTVLAKIIRMVGDAHARRAPVEQWVAKFARIYTPIVMVLAILIAAVPTLV
                     FGGAWDYWFYNALVLLVIACPCALVISTPVSIVASLTSAARAGVLIKGGAYVEAPGRT
                     TALAMDKTGTITMGEPEVAAVHPLGGASARDLMSVAAGLEARSSHPLARAILARAEAD
                     SIAVSAADDTRTVPGRGLEGRSGGRSVWLGSDRFAKEKGFDGIIPKELRDRIEGAGST
                     LVAVGDEAGVTGVLELRDRIRPDAKGIVARLHAQGVKTIVMLTGDNERTARAVAAEVG
                     IDEVRAELLPEDKVTAIEELVARHDMVAMIGDGVNDAPAMARANYAIAMGAVGSDAAI
                     ETADIALMTDDIGRVPWLIGHSRRTMGIIRQNIGISLATKALFVGLTVLGMASMWGAI
                     AADVGVSLVVVANALRLLNGHRTDARPSGGKPAARPVSDGVLAPGH"
     gene            6449..6961
                     /locus_tag="EYO87_13885"
     CDS             6449..6961
                     /locus_tag="EYO87_13885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008889351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67061.1"
                     /translation="MTNFKLPRRALVVSGLVAFLSACASKFRSYSGPEVTRLRMYKAQ
                     RLLFLDGKERVLKTYPIGLGFAPEGHKQFEGDGRTPEGSYIIDRRNPESLFHLSIGIS
                     YPNEADIAFAEARGRSPGGDIFIHGGPRPGIDPENVRDWTAGCISVTDAQIEEIYAMV
                     KNGTPIDIYA"
BASE COUNT         1275 a         2227 c         2257 g         1259 t
ORIGIN      
        1 ggcatgtcgt cctgatccat gccggacatc ggcatcgtca tcgtcatgcc catcgaatcc
       61 atgccctcca tgccggatgg atccatgccc gccatgccag tgccatcctg cgacgggccg
      121 cgcaccatgc cgtgctgcat cgccgccatg cccgatccga tacggcctgc gtcatcgccg
      181 accagtcgcg ccatcagctc ctcgggcgac gtgaaggaaa agtcgtgcag cagcatcacg
      241 acctcttgcc ggtcggcagc gccatcacga agaatcagcg gcgcggccat caactgcgcc
      301 tcttgcagac cgaaatgcga atgcatccag ttggtgccgc cccgcggcag atcgaaggca
      361 aagttctttg tccccccggc cggaatcggt tcctgcgaca gggtatttcc gtcctgtccg
      421 aaaggcggcg tgagaccgtg ccaatgaatg accgtcggca ccccggcctc gttggccagc
      481 gcgacgtcga aaccatccgc gatgtccagg gtcagcccct gccggccgcg ttcgtcggtg
      541 agaccaaaga ccgtcgcagc ccggccctga acctcgatcg tgcgcgtgcc tgccgtcagt
      601 cgccgcgcac cctgtgccgc ccaggcttgc gccccgaaag agccgagggc cgtgacagcc
      661 gccaattgac ctgccgttga caggaaacgt cggcgactga tgccggggat gagtgccatc
      721 tggtgatccg atccttttga gtgcgagtgc agaacgtgac gtgcgacagg ttggccgggc
      781 cggctgtcag atggttgcaa ccagccccgg aatggttcgg cagataggtc agccgaacgc
      841 gccgggcaag atgatgccgt gtcgcaggaa aatgaagatt ttcgggatcc tgccaatctg
      901 cgcggccggg cgccccgggg ccctgcagcg cgtgacggga ccggccgaca tcccggcata
      961 cacctctttg ccaggcacag gccctggaaa gctgtcgcga cccgctatcg cagggttgca
     1021 gaccgggccg gccatgattt cgatccgcga ccgacaggca aggccatgcc gtcacgcggc
     1081 agaaaaagag gccgccttcc cgacggcctc gcggtcatct tgcgccatca tgtcgcagat
     1141 cgcgacgagc tggcatcttc aggcattgca gccgtaaagg ccacgatagc ccgcttgcag
     1201 gcccgcatct agattgatga ccagatccgc ctcctgacgg ccgcttccag cctccagtcc
     1261 ggcgccctca ccgggcgcgc tgacccgcat ggccatgccc gcggtggtca gggccggccc
     1321 cgtcgcgacc gcggcggcat cctccgcgtc caggcggatc aagttgccgc tgatcttggt
     1381 cagggccgcg ccatcctgac cgatcgccag gacaggctgg ctggtttcgg tgtaggtgaa
     1441 ggtgcaggcc gcgccgttcg ggaatatctg cgcgatgtca tcattggtca ggaattccgg
     1501 atcaaggacg ctgacctcgg ccgaggacag ggcctgatcg acgctgacga cctgggccgc
     1561 cgggggattt tcctgctggg tcgcatcgcc cgaggcttcg atgtcggcga tcagataccg
     1621 catctcagcg atttccttgt cctgggcata gatgatctcg tcggccagct tgcgcacgcg
     1681 cggatccgag atatcggccc ggctcgatgt catgatcgcg atcgaatggt gcgggatcat
     1741 cgcgcgcatg tagcttgtgt cgcccaccgt gaactggctg cgcaccagcc acagcgaaac
     1801 gccgaagacc acgcccgcgc ccaggaaaat ggcgatgttc agagacttgc tggaatacat
     1861 cgacagcatg aaggccagca tgatgaccgc catcgtggcc cccatcagca gcgccatgta
     1921 ggcccgcgtt tccgaccaga acacatgcga aagcagatag gtgttgagat acatcagacc
     1981 gaacatcacc accgtcgacg tggcgatcat cgcggcaaag cggccgtaac ccattccgcc
     2041 cccgtcccca tggccttcat tggtcttctt catgacgaat tgatcccctt ttcgttgcgt
     2101 tataccaata cccactatat gtatccccaa accccatggt ggggatcggg ttccacgatg
     2161 gcggcgatga aaccgaacaa gcagcgcgcg ctcgatcgtc ttgcgcggat cgaaggtcag
     2221 gtccgtggta tcgcccgcat ggtcgaggag gatcgctatt gcgtggacat cctgtcacag
     2281 accgcggccg ttcattcggc gctgatgggg gtcgaacgga tgcttctgga aaaccatgcc
     2341 cgacattgcg tcgaggccgc gatcgccagc ggcgaaccgg acgaacaacg ggcaaagttc
     2401 aacgagttga tcgcgctctt gcaaaggacg cagcttcagg ggcggacgtg acatggtgtc
     2461 gcaggctttc ggcgcccgat ccgcggcaag atcggcgtcg ctgtctcccg gcgtcgggat
     2521 gaattcgacc aggcgacacg gacatggcgc ctgtccagga cgggacgggg atcggccagg
     2581 gcggcggcag caggtctgaa atttttttca gcttcatgcc cggatcacgc gagtttttgt
     2641 tgaacctctg gccgctgcag gttttatcgg aacgggacca aatcgagatt gccgcagggg
     2701 tattggactt ttgggcaacg atcacttcat tgatgtcaca ggcattgacg atatcgaacg
     2761 accaaggaag ggcaaaagat gctgacgaga cgacacttca tccagacaac cacgacattg
     2821 ttctctgcgt caatatctgg ccccctgttt gccagcacct ggccggatgc cgcccagaag
     2881 gccgcctggg acgcggaggt cacgccgccg ggctatgatg cggccacgac caatccgtgg
     2941 ggtctgcacc cgcgctatct gccccagcgg gtcgtggcga atgacgggct tgtcccgggc
     3001 gatatccatg tcgatgcggt ggcgaaatat ctttatcaca tcgagaccgg cggaaccgcg
     3061 atgcgctatg gcgtggcgat cgggcgcggc gacctgtatg aaccgggcgt ctacacgatc
     3121 aagcgcaagg tcgaatggcc gcactggacc ccgacccaga acatgatcga acgcgagcct
     3181 gaaatctacg cgaagtttga aaacgggatg gagcccggac ccgagaacgc gcttgggtcg
     3241 cgcgccctgt atctgtatgt cggcgacagg gacaccatgc tgcgcatcca cggaacgccg
     3301 ttccccaaaa gcatcggcag ccgcgccagt tccggctgcg tgcgcatggt catggtgcat
     3361 atcaacgatc tctatccgct ggtggaactc ggctcgaccg cgttcctgta ttcagcctcg
     3421 gacagcgtga cgtcctgaag ccggggccgg tcccatcccc ggatcgccgg ccggggccta
     3481 tgccccggcg gggtcaggct cgcggttgcc tgcagatggg acggccatcg gccgtcgtca
     3541 ggggaagaag cgtggtttcg acctgtccgc gatgttcgta ccaatagcag ttgtcctgcg
     3601 gcagaaggcg cgcagaggcg atgtcctgtc ccggcgcggc aagcgcgtaa agttcgggcg
     3661 gaagggcgtc gggcgcggtt tcggcaacct gcgttctggg tgtcatgctg gtgcaagcgg
     3721 tgctgaccag aaccgtcgcc aggacaaagt aaggttttct tttcatctgg gtcgttttcc
     3781 tgcgtgatga accttgtcgg tatccttgtt gcatttgaac ccctgactca caagcctgcc
     3841 agcggtcaag tttgtgtcga gtgtgaacgg acaggaaaaa ttccggcaag gccgaattat
     3901 gccttgaagc tacagttgct gtagggacta tcttctgctg aactcatcga atcccgaggt
     3961 cagttcatgc catccgacaa tcacaagcac gatcacgcac aggatcacga tcacaatcat
     4021 gatcaagatc acaagcacga tcacgccggc cattcacatg ctcaggccca cagccacgat
     4081 catggcggcg gcgcctgctg cggcagccag gcggcaagca gcgtcgtccc ggcgccgccg
     4141 ccctcctccg cggcgggaag aagctttcag gtttccggtc tcgattgcgt cgaggaagtg
     4201 gcgatcctga acaaggtcgt cggcccgaag atcggcggtg ccgagcatct ggccttcgat
     4261 gtcatcaatg gtcgcatgac cattctcgac agcgccgaca cgatttcgga tgacgaagtg
     4321 accaagctgg ttgcaagcac cgggatgagc gcgaggccct ggagttccga gaacgcggcc
     4381 gaggatcagg ccgcgcacct gaagcggcag aaattcttca ccgcgctttc gggcgggttc
     4441 tgggctctgg gattcatctg gcatggcgtg gaatccggca ctgcgggtct ggtgcgaatc
     4501 ttttcggacc acggcgagac accgatgccg ctgatcgaga tcggcgcttt tttcctggcc
     4561 atcgtcttcg gcgcatggct ggtcgcgccc aaggcctggt cctcggcccg gcggatgtca
     4621 ccggacatga atttgctgat gatcgtcgcg gtttccggcg cgatccttct gggcgcctat
     4681 ttcgaggcgg cgacggtggc cttcttcttc tcgctctctc tctacctgga aagctggagc
     4741 gtggggcgcg cgcgcaacgc ggtctcggcg cttctggatc ttgcgccgcc gacggcgcgg
     4801 gtgatccgcg atgacgggac cgaggccgat gtccctgcgg cccaggtggc cgtgggcgac
     4861 cgcttcgtgg tgcgcggcgg cgaccgcatt cccctggacg gcgaggtgac cgagggcgtg
     4921 ggcgcggtca accaggcacc gatcacgggc gaaagcgcgc tggtgccgaa ggaaccgggc
     4981 gaggatgtct atgccggcac catcaatggc gagggcacgc tgacggttcg ggcgaccaag
     5041 gccgccagcg acacggtcct ggccaagatc atacgcatgg tcggcgacgc ccatgcgcgc
     5101 cgcgcaccgg tcgagcagtg ggtggccaag ttcgcccgca tctacacccc catcgtgatg
     5161 gtgctggcga tcctgatcgc ggccgtgccg acgctggtct tcggcggggc ctgggactac
     5221 tggttctaca acgcgctcgt cctgctggtg atcgcatgtc cctgcgcgct ggtcatctcg
     5281 accccggttt ccatcgtcgc ctcgctgacc tctgccgcgc gtgccggggt tctgatcaag
     5341 ggcggcgcct atgtcgaggc gccgggccgc accacggccc tggcgatgga caagaccgga
     5401 accattacca tgggcgaacc cgaggtggcg gcggttcatc cgctgggcgg cgcctcggcg
     5461 cgtgacctga tgtcggtggc ggcgggactt gaagcacggt cctcgcaccc gctggcccgc
     5521 gccatccttg cccgtgccga agccgacagc atcgcggtct ctgccgccga tgatacgcgg
     5581 acggtgccgg ggcgcggcct cgaagggcgg tcgggcggtc gttccgtctg gctcggctcg
     5641 gatcgcttcg ccaaggaaaa aggcttcgac ggcatcattc ccaaggaatt gcgcgaccgg
     5701 atcgaaggcg cgggcagcac gcttgtggct gtcggagacg aggccggggt caccggcgtc
     5761 cttgaactgc gcgaccgcat ccggccggac gcgaagggca tcgtcgcgcg gcttcatgca
     5821 cagggcgtga agaccatcgt catgctgacc ggcgacaacg aacggaccgc gcgtgcggtc
     5881 gcggcggaag tcggcatcga cgaggtccgc gccgagcttc tgcccgaaga caaggtcacg
     5941 gccatcgaag aactggtcgc ccggcacgac atggtcgcca tgatcggcga cggggtgaac
     6001 gatgcgccgg ccatggcacg ggccaattat gccatcgcca tgggcgcggt cggttcggac
     6061 gcggcgatcg agacggcgga catcgccctg atgaccgacg atatcggccg ggtgccgtgg
     6121 ctgatcggcc attcgcgccg caccatgggg atcatccgcc agaacatcgg catctcgctt
     6181 gcgaccaagg cgcttttcgt cgggttgacc gtgcttggca tggcctcgat gtggggcgcg
     6241 atcgccgccg atgtcggtgt ctcgctggtg gtcgtcgcca acgcgctgag actgctgaac
     6301 gggcaccgga ccgacgccag gccttcgggc ggaaaacccg ccgccaggcc ggtttccgac
     6361 ggcgttcttg cccccggaca ttgaaccggc gggcccgccc cgcttgcctt ggaaggcaac
     6421 cggaaccgaa cacgaggagc gtcgcgtcat gacgaatttc aaacttccac gacgcgcgct
     6481 tgtggtttcg ggactggttg ccttcctgtc cgcctgcgcc agcaagttcc gcagctatag
     6541 cgggcccgaa gtgacgcggc tgcgaatgta caaggcgcag cggctgcttt tcctcgatgg
     6601 caaggagcgg gtattgaaga cctatccgat cgggctgggc ttcgcacccg agggacacaa
     6661 gcagttcgag ggtgacgggc ggacacccga gggatcctat atcatagacc gcagaaatcc
     6721 cgagagcctg ttccacctgt cgatcgggat ttcctatccc aacgaggccg acatcgcctt
     6781 tgccgaggcg cgcgggcggt ctccgggcgg ggacatcttc attcatggcg gcccgcgtcc
     6841 cggcatcgat ccggagaatg tgcgcgactg gaccgccggc tgcatctcgg tcaccgatgc
     6901 ccagatcgag gaaatctatg ccatggtgaa gaacggcacg cccatcgaca tctacgcctg
     6961 agcccgaccg ctcagccatg gcgccgcgaa cagcagcgcc acaccgctga ccacgaac
//
LOCUS       DTVW01001054            1325 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2296224, whole
            genome shotgun sequence.
ACCESSION   DTVW01001054 DTVW01000000
VERSION     DTVW01001054.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1325)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1325)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1325
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2296224"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(107..565)
                     /locus_tag="EYO87_13890"
     CDS             complement(107..565)
                     /locus_tag="EYO87_13890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008328414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c maturation protein CcmE"
                     /protein_id="HIC67062.1"
                     /translation="MAGLKPLKKRRRVQVLIGASVALLIAVGLIGYGFRDGINLYRSP
                     TQVSQRAPAPDEYFQLGGLVKDGSIVKRGGVAFDFVITDGAAEIPVTYIGRDPRPDLF
                     KEGQGTIAKGWYRDGRFEAQSLLAKHDETYMPREVVDTLKDAGVYQDPNS"
     gene            complement(576..>1325)
                     /locus_tag="EYO87_13895"
     CDS             complement(576..>1325)
                     /locus_tag="EYO87_13895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012178432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate racemase"
                     /protein_id="HIC67063.1"
                     /translation="RLPDLPLVYLGDNAHAPYGVRTADDIFDLTCAGVSRLWDEGCDL
                     VILACNTASAAALRRIQETWLPQDKRVLGVFVPMIEALTERQWGDNSPPREVSVNQVA
                     LFATPATVASRAFQRELAFRAVGVDVEAQPCGGVVDAIEMGDEILAEALVTSHVEALL
                     RRMPNPEAAILGCTHYPLVEAAFQRALGDNVAVYSQAGLVAASLADYLDRRPEFLGAG
                     RVAKYLTTGDPVRVSGKATQFLRRPIRFEAI"
BASE COUNT          247 a          464 c          401 g          213 t
ORIGIN      
        1 ccgttgcatg tcgtgatcct caggcatcgc acatggtcgc gcccctgccg ccgcgggttc
       61 gagcgacccg tccccgctgg acaggcagcc cgcccggcgc cgcgtctcag gaattcggat
      121 cctggtagac gcccgcatcc ttcagcgtat cgaccacctc gcgcggcata taggtctcgt
      181 catgcttggc cagaaggctt tgcgcctcga agcgaccgtc gcgataccag ccctttgcga
      241 tggtgccctg accttccttg aaaagatcgg gacgcggatc gcggccgata taggtcacgg
      301 ggatctcggc cgcgccatcg gtgatgacga aatcgaaggc cacgccgccg cgcttcacga
      361 tcgagccgtc ctttaccagc ccgccaagct ggaaatattc gtccggcgcc ggcgcgcgct
      421 ggctgacctg cgtgggcgaa cgatacaggt tgatcccgtc ccggaacccg tatccgatca
      481 gcccgacggc gatcagcaag gcgaccgatg cgccgatcag aacctgaacg cggcggcgtt
      541 tcttcagcgg tttcagacct gccatcgcgt tctcctcaga tcgcttcgaa ccggatcggc
      601 cggcgcagga attgcgtggc cttgcccgaa acacgcacgg gatcgccggt cgtcagatat
      661 ttcgccaccc ggcccgcgcc cagaaactcg ggccgacgat caagataatc cgcaaggctt
      721 gccgcgacca gccccgcctg cgaatagacc gccacattgt ccccgagcgc gcgttggaac
      781 gcggcctcga ccagcggata atgggtgcag cccagaatcg ccgcctcggg gttcggcatc
      841 cgacgcagca gcgcctcgac atggctggtg accaacgcct cagccagaat ttcgtcaccc
      901 atttcaatgg catcgacgac cccaccgcag ggctgcgcct cgacatcgac gccgaccgcg
      961 cgaaaggcca gttcgcgctg aaaggcgcgg ctggcaaccg tcgcgggtgt cgcgaacagc
     1021 gccacctggt tgaccgagac ctcgcggggc ggcgaattgt cgccccattg ccgttcggtc
     1081 agcgcctcga tcatcggaac gaagacccca agcacgcgct tgtcctgggg cagccaggtt
     1141 tcctgaatgc gccgcagcgc ggccgcgctg gctgtattgc aggccagaat cacaagatcg
     1201 caaccctcat cccacagccg cgacacaccg gcacaggtca gatcgaagat gtcgtcggcg
     1261 gtccgcaccc catagggggc atgggcattg tcgcccagat agaccagcgg cagatccggc
     1321 aggcg
//
LOCUS       DTVW01001055            1787 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2297025, whole
            genome shotgun sequence.
ACCESSION   DTVW01001055 DTVW01000000
VERSION     DTVW01001055.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1787)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1787)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1787
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2297025"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..347
                     /gene="purH"
                     /locus_tag="EYO87_13900"
     CDS             <1..347
                     /gene="purH"
                     /locus_tag="EYO87_13900"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_354187.1"
                     /note="involved in de novo purine biosynthesis; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HIC67064.1"
                     /translation="VAKHVKSNAIVYAKDQATVGIGAGQMSRVDSTRIGRRKSEDMAQ
                     ALELPLPLTVGAAVASDAFFPFADGIEALAEADARAVIQPGGSVRDDEVIAAANELGL
                     AMVFTGQRHFRH"
     gene            446..1003
                     /gene="lspA"
                     /locus_tag="EYO87_13905"
     CDS             446..1003
                     /gene="lspA"
                     /locus_tag="EYO87_13905"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011909874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase II"
                     /protein_id="HIC67065.1"
                     /translation="MRLTGRLATVIIVLDQALKYWVLQLLNLDLLRRIDVAPPWLNLR
                     MAWNQGMNFGLMASDRDLTRWLLIGIAVAICIWVWIWLRRSNAGLLARISGGLLIGGA
                     IGNVIDRLRYGAVADFLNMSLPGWDNPFSFNIADISIFAGAIVLVLLPQEKKGSTGTK
                     ARKSAAAKRPGARGDKPRDGAENSR"
     gene            1032..1553
                     /locus_tag="EYO87_13910"
     CDS             1032..1553
                     /locus_tag="EYO87_13910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013066016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3035 domain-containing protein"
                     /protein_id="HIC67066.1"
                     /translation="MRAFALIIGFTALAGLSACSGDPRLMNIRAGQSSPDEFAVLPSK
                     PLSMPPDLAVLPAPTPGGPNITDPTPQADAVAALGGNPARLDDRGIAASDQALVAYAG
                     RAGTNPDIRPELAQADLRWRSRNARRPLEALFGTSVYQRAYRSMALDATAEQIRWQRA
                     GARTSTSPAPAAK"
     gene            1561..>1787
                     /locus_tag="EYO87_13915"
     CDS             1561..>1787
                     /locus_tag="EYO87_13915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HIC67067.1"
                     /translation="MVPGFDPASPDFGRDPWPVYAAIRALPELPWLAGFEGHVAARFH
                     DVSAIASDRRMVRGAAAFAAPGDRDRLRRAE"
BASE COUNT          283 a          600 c          619 g          285 t
ORIGIN      
        1 atgtcgccaa gcacgtcaag tcgaacgcca tcgtctatgc caaggaccag gcgaccgtcg
       61 gcatcggcgc aggccagatg agccgcgtgg acagcacccg gatcggccgc cgcaagtccg
      121 aggacatggc ccaggcgctt gaactgccgc tgccgctgac cgtcggcgcg gccgtggcct
      181 ctgacgcgtt cttccccttt gccgacggga tcgaggccct ggcagaagcg gacgcccgcg
      241 cggtgatcca gcccggcggc tcggtccgcg acgacgaggt gatcgcggcg gcgaatgaat
      301 tggggcttgc catggttttc accggccaac ggcatttccg gcactgatgc aaaacgaact
      361 gcccttcgag gcggaaagac cgcccgccaa acccgcccga aaaccgcgcg ggccgcgcaa
      421 accgaaaccg ccgccgcggg cggacatgcg gctgaccggc cggcttgcga ccgtgatcat
      481 cgtgctggac caggcgctga aatactgggt cctgcagctg ctgaacctcg accttctgcg
      541 ccggatcgac gtggcgccgc cctggctgaa cttgcggatg gcttggaatc aggggatgaa
      601 tttcgggctg atggcgtcgg accgggacct gacgcggtgg cttctgatcg gaatcgcggt
      661 ggcgatctgc atctgggtct ggatctggct tcggcgcagc aatgccgggc ttctggcccg
      721 gatctcgggc ggtctgctga tcggcggagc cattggcaac gtgatcgacc gactgcgcta
      781 tggcgctgtg gccgatttcc tcaacatgtc gctgccgggc tgggacaacc cgttcagctt
      841 caacatcgcc gatatcagca tcttcgccgg cgccatcgtg ctggttctgc tgccgcagga
      901 aaaaaagggc tcgaccggga ccaaggcgcg caagtccgcc gccgcgaagc ggcccggggc
      961 gcggggcgac aagccgcgtg acggggccga gaattcgcga tagaagaagc caaacgacga
     1021 aggggcagga tatgcgggct tttgcgctga tcatcggatt tacggccttg gccgggcttt
     1081 cggcgtgcag cggcgacccg cgtctgatga acattcgcgc aggtcagagc agccccgacg
     1141 aatttgccgt gctgccgtcg aaacccctgt cgatgccgcc tgatctggcc gttctgccgg
     1201 cgccgactcc gggcgggccc aacatcaccg atccgacgcc gcaggccgat gcggtggccg
     1261 cgcttggagg caatcctgcg cggctggacg accgcggcat cgccgcttcg gatcaggcgc
     1321 tggtggccta tgccgggcgg gccggcacga atcccgacat acgcccggaa ctggcgcagg
     1381 cggatcttcg ctggcggtcg cgcaatgccc gccgcccgct ggaggccctg ttcggcacct
     1441 cggtctatca gcgcgcctat cgcagcatgg cgctggatgc cactgcggaa cagatccgct
     1501 ggcagcgcgc cggcgcgcgg acctcgacct cgccggcccc ggcggccaag taggcgcgcc
     1561 atggttccgg gcttcgatcc ggcctcgccg gatttcggcc gcgatccctg gccggtctat
     1621 gccgcgatcc gggcgctgcc cgaattgccc tggctggcgg gattcgaggg ccatgtcgcg
     1681 gcgcggtttc acgatgtaag cgccatcgcc tcggaccggc ggatggtgcg gggcgccgcc
     1741 gcctttgccg cgcccggcga cagagaccgc ctgcgacggg ccgagaa
//
LOCUS       DTVW01001056            3820 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2297235, whole
            genome shotgun sequence.
ACCESSION   DTVW01001056 DTVW01000000
VERSION     DTVW01001056.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3820)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3820)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3820
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2297235"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(160..1725)
                     /locus_tag="EYO87_13920"
     CDS             complement(160..1725)
                     /locus_tag="EYO87_13920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="SARP family transcriptional regulator"
                     /protein_id="HIC67068.1"
                     /translation="MSDLILRLAGPVDLTGPGGERLTPRGMKARGALAVLGSSVKMQV
                     ARPRLQDLLFSEREPEQGAASIRQLLREIRIALGPWRHALLTGPGWVGLDTDLVRLDV
                     TGRPGADGQRPEFASDLDIPDPEFEDWLRDARSHYEDQADQVLASVVEPDGAPALILQ
                     SPMAADPQAAVTAAMILQEAAARVSDMLPLQVVQGDPGIGRISVGIELGAMANKAGGS
                     IVILFAARLRSDGRMLWSRRFTIPADDTLAHLRKVASSVTVAILHGVEALRETVPDPR
                     LRRMPLQDVFSYSAPRLRRADEQLAQIDPNGDKAVILSLRSYIRHTMLLERLSKNPED
                     DAELAADMAARARELSPGNPSALGVNAMVAAYRGQRETAFDMARHAMAIDDENPIARL
                     AYSSALTSMGHHREAEAEASAAHNSALSELGPAAWILRRAIATMRVGDLPAAERYFST
                     THGYAPENRPALRFLSAIRYELNDHEGARRALQQLKKLEPDFSLELMGSDGYPVDSLR
                     RAGLLKVTKSGLI"
     gene            1835..2965
                     /locus_tag="EYO87_13925"
     CDS             1835..2965
                     /locus_tag="EYO87_13925"
                     /inference="COORDINATES: protein motif:HMM:PF01569.19"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HIC67069.1"
                     /translation="MAVLNAQNAQNAQNAQNAQNAQNAQGGGIGPGSTLMAAALIRTR
                     EAIAGTEQIQPVAGQTSGLDITARLERLDDIDREAVMAGELLEDISFSATGYDPAENT
                     ARTITVLRRKTGTNPLKASYTELAAITRPGLDDFRQAATLIGSYAELRSDRAAEIQVQ
                     TQHLVPFFAAILPIEASRAPATLEMLDLAQDMATFVVMRVKLNLGCPRPPQFSDRIQP
                     MIACPSHASLPSGHATQAFTLATILALLQDPDAGVASDSQLYRLACRISINRTVAGVH
                     FPADSAAGAVLGIQLGRYLAARARKSAFGSAGEVGRGDFDGTLFHDSGQPRDFHYAIL
                     NQMVAGADPSTSFSTDAARVRPAPLWGSLCKRAVAEWGQRWS"
     gene            2956..3204
                     /locus_tag="EYO87_13930"
     CDS             2956..3204
                     /locus_tag="EYO87_13930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67070.1"
                     /translation="MELKQEPNDPNCGKAQPEWTAPVAAYTRYRPGLSPYMHYWQQLR
                     ARRGQTAPPPDHQPEDGAKLPGQMAEALEDLIRRSFGE"
     gene            3201..>3820
                     /locus_tag="EYO87_13935"
     CDS             3201..>3820
                     /locus_tag="EYO87_13935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67071.1"
                     /translation="MIALAIMSAFEDFVNDPAGVLPDDAMNPDPQELDDSDLDDPALA
                     YLEDAALPDPDRGCILAVIDDAIPYAHERLTLPGGVSRVAAFWAQDAAFAGGPGLDLP
                     SGIELRGPAIGQLLQQVAAGALPGEDAIYRASGVLDFRRDSTPSTAYSDPHGAAVALL
                     AAGFAPQDPAGRDHPLIAVNLPPRITEDSMGTLAPVSILASILFIIT"
BASE COUNT          619 a         1325 c         1267 g          609 t
ORIGIN      
        1 catcgcggcg ggcagcctga tcgcggaacg cgccggcgcc gcggtcagcg accggcaggg
       61 cgcgcggatg cggttcaacg ggccgcgcgc gatggtggac gggctgatcg tcgccggccc
      121 gcgtctgcac gaccagatgc tgacggcgct gaggcgcggc tagatcagcc cggatttcgt
      181 cactttcagc agccccgcgc ggcgcagcga atcgaccgga tagccatccg atcccatcag
      241 ctccaacgag aaatcaggct ccagtttctt caattgctgc aatgcccggc gcgcgccctc
      301 gtggtcgttc aactcatagc ggatggcgct gagaaaacgc aatgcggggc gattttcggg
      361 cgcgtatccg tgggtggtcg aaaagtatcg ctcggccgcg ggcagatcgc ccacccgcat
      421 ggtggcgatg gcccgacgca ggatccaggc ggcggggccc agttcggaca gcgcgctgtt
      481 atgggcggcg ctggcctcgg cctcggcctc gcggtggtgg cccatgctgg tcagcgcgct
      541 ggaataggcc agacgcgcga tcggattttc gtcgtcgatg gccatggcgt ggcgcgccat
      601 gtcaaaggcg gtctcgcgct gaccccgata ggcggcgacc attgcgttca cgccaagcgc
      661 cgagggattg ccgggcgaca attcgcgcgc ccgcgcggcc atgtcggcgg ccagttccgc
      721 gtcatcctcg gggttcttcg acagacgttc cagcagcatc gtgtggcgaa tataggagcg
      781 cagcgacagg atcaccgcct tgtcgccatt ggggtcgatc tgggcaagct gttcatccgc
      841 gcgtctcagc cgcggcgcgg aatagctgaa cacgtcctgc agcggcatcc ggcgcagacg
      901 cggatcgggc acggtctcgc gcagggcctc gaccccgtgc aggatggcga cggtgacgct
      961 gctcgcgacc ttacgcagat gcgccagcgt atcgtcggcc gggatggtga aacggcgcga
     1021 ccaaagcatc cgcccgtcgc tgcgcagccg ggccgcgaac aggatgacga tgctgccccc
     1081 cgccttgttg gccatcgccc ccagctcgat cccgaccgag atccggccga tgcccggatc
     1141 gccctgcaca acctgcaggg gcagcatgtc gctgacccgt gccgccgctt cttgcaggat
     1201 catcgccgcc gtcaccgccg cctgcggatc ggccgccatc ggcgattgca ggatcagcgc
     1261 cggggcgccg tccggttcca ccacgctggc caggacctgg tcggcctgat cctcgtagtg
     1321 gctgcgggcg tcacgcagcc aatcctcgaa ttcggggtcg ggaatatcca ggtcggacgc
     1381 gaattccggc cgctgcccat cggcaccggg gcggccggtc acgtccagcc gcacaagatc
     1441 agtgtccagc ccgacccagc ccggcccggt cagcagggcg tgccgccagg gtccaagggc
     1501 gatccggatc tcgcgcagca attgccggat gctggcggcg ccctgttccg gctctcgttc
     1561 gctgaacagc agatcctgca gccgcggccg agccacctgc atcttgaccg aggatcccag
     1621 tacagccagc gcaccgcgcg ccttcatgcc gcgcggcgtc agacgttcgc cgccaggtcc
     1681 cgtcagatcg acgggcccgg ccagacgcag gatcaggtcg ctcaccggag attgtccgtc
     1741 gctgtgatca agaaaatgtg ttatccttaa acgataaatt ttgacacggc aaaccggtcg
     1801 tggtggtcgg agcaggcggg aaggtggttc tccgatggca gttttaaacg cgcaaaacgc
     1861 tcagaatgcg caaaacgcgc aaaatgccca gaacgcacag aatgcccagg gcggcgggat
     1921 cgggccgggg tcgaccctca tggcggccgc gttgatccgc acccgcgagg ccatcgcggg
     1981 caccgaacag atccagcccg tcgccggcca gacgtcgggc ctggacatca ccgcgcggct
     2041 tgaacggctg gacgacatcg accgcgaggc ggtcatggcg ggcgaattgc tggaggacat
     2101 cagcttttcc gcgaccggct acgaccccgc cgagaacacc gcccggacca tcaccgtcct
     2161 gcgccgcaag accggcacga atccgctgaa ggccagctat accgaactgg ccgcgatcac
     2221 ccggcccggc ctggacgatt tccgccaggc tgcgacattg atcggcagct atgccgaact
     2281 gcgcagcgac cgcgccgccg aaatccaggt ccagacccag catctggtcc ccttcttcgc
     2341 cgcgatcctg ccgatcgagg ccagccgcgc gcccgccacg ctggaaatgc tggatctggc
     2401 gcaggacatg gcgaccttcg tcgtcatgcg cgtcaagctg aacctgggct gcccgcgccc
     2461 gccgcagttc agcgaccgca tccagccgat gatcgcctgc ccgtcgcatg cctcgctgcc
     2521 cagcggccat gccacgcagg ccttcacgct ggccacgatt ctggcgctgt tgcaggatcc
     2581 ggatgccggc gtggcgtccg acagccagct ttaccgactt gcctgccgga tttcgatcaa
     2641 ccgcaccgtc gccggcgtgc attttcccgc cgacagcgca gcgggggcgg ttctgggcat
     2701 tcagctgggc cggtatctgg cggcacgggc acgcaaatcc gccttcggca gcgccggcga
     2761 ggtgggccgg ggcgattttg acggcacgct gttccacgat tccggccagc cgcgcgattt
     2821 ccactatgcg atcctgaacc agatggtcgc gggtgccgat ccttcgacca gcttttcaac
     2881 ggacgccgcg cgcgtcaggc ccgctccgct gtggggatcg ttgtgcaagc gcgcggtcgc
     2941 ggaatggggg cagcggtgga gctgaaacag gaaccgaacg atccgaattg cgggaaggcg
     3001 cagccggaat ggaccgcacc cgttgccgcc tacactcgct atcgccccgg cctgtcgccc
     3061 tacatgcatt attggcagca gcttcgcgcc cgccgcggcc agaccgcgcc gccgccggat
     3121 caccagcccg aggacggggc caagctgccc ggccagatgg cagaggcgct ggaggatctg
     3181 atccgccgga gctttggcga atgatcgcgc tggccatcat gtcggccttc gaggatttcg
     3241 tgaacgatcc tgccggcgtg ctgcccgatg atgcgatgaa tcccgacccg caggaactgg
     3301 acgacagcga cctggacgat ccggcgctgg cctacctgga ggacgcggcc ctccccgacc
     3361 ccgatcgcgg ctgcatcctg gcggtgatcg acgatgccat cccctacgcg catgagcggc
     3421 tgaccctgcc gggcggcgtc agccgggtgg cggccttctg ggcgcaggac gcggccttcg
     3481 cgggcggtcc ggggctggat ctgccctcgg ggatcgaatt gcgggggccg gcgatcgggc
     3541 agttgctgca acaggtggcg gctggtgcac ttccgggcga ggacgcgatt tatcgcgcca
     3601 gcggcgttct ggacttccgg cgcgacagca cgccttcgac agcctattcc gatccgcacg
     3661 gcgccgcggt cgcgctgctg gccgccggtt tcgcgcccca ggatccggcc gggcgcgacc
     3721 atcccctgat cgccgtcaat cttcccccca ggatcaccga ggattcgatg ggcacgctgg
     3781 ccccggtctc gatcctcgcc tcgatcctgt tcatcatcac
//
LOCUS       DTVW01001057            1432 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2297854, whole
            genome shotgun sequence.
ACCESSION   DTVW01001057 DTVW01000000
VERSION     DTVW01001057.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1432)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1432)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1432
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2297854"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(68..1348)
                     /locus_tag="EYO87_13940"
     CDS             complement(68..1348)
                     /locus_tag="EYO87_13940"
                     /inference="COORDINATES: protein
                     motif:HMM:PF09106.9,HMM:PF09107.9"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67072.1"
                     /translation="MSQSVAVAGQRVAANLSGVEVAEIARGDTAVTPGSFDATRRLDA
                     LLDLLPVARRLRHGARVRFHQGTSEVLGRVAVGPLVGRSGASPEPADADEHEDAPGEL
                     QPGGRAFVRLRLESAAVLTRGDRFILRAYSPPLTIGGGFVIDPRPPRGGMRTAAGRRR
                     LERLRVGLGAEEAGEDEAVTLLVGERGIAGIPVTELLTRAGLRTDTADGLIDQLQSAG
                     TIRRIAGLVVDTAALTAVADRLVTMVTAYHAEQPLSEGAPREEVRERLFRQADAAVFD
                     AVVNDLVQAGRVVARDRLALADHRVTLSPEETRISEAVQALLVAAGLSPPAVALVPGQ
                     IGCEPVPLDRVLGWMVREATVVRVGALVFDALALDNLKQDIRQLETAEKPARIDVGTF
                     KERYGVSRKFAIPLLEYLDRERVTRRMGQYRIVL"
BASE COUNT          257 a          560 c          421 g          194 t
ORIGIN      
        1 tagcgtagtc taccgacaga caccatcgtt ggcaaaaacg gaggcgtttc gcaccggcga
       61 agtcgcctca cagcacgatc cggtattgcc ccatgcgcct cgtcacgcgc tcccggtcca
      121 aatactcgag cagcgggatc gcaaacttgc ggctgacccc gtagcgctcc ttgaacgtcc
      181 cgacgtcgat acgcgccggc ttctccgccg tctccagctg tcggatgtcc tgtttcaggt
      241 tgtcgagcgc caacgcatcg aacaccaacg ccccaaccct gaccacagtg gcctcacgca
      301 ccatccaacc caagacccgg tccagaggaa ctggctcgca cccgatctgg ccaggcacga
      361 gcgcgacagc tggcggcgac aaccccgcag ccaccagcaa tgcctgcacc gcctcgctga
      421 ttcgcgtctc ctccggtgac aacgtcaccc ggtggtccgc cagcgccaac cgatcgcgtg
      481 ccaccacacg cccggcctgc accaggtcgt tgacgacggc gtcgaacacc gcagcgtccg
      541 cctggcgaaa cagccgctcc cgcacctcct cgcgcggggc cccctcgctc aacggctgtt
      601 ccgcgtgata cgcggtcacc atcgtcacga gacgatcggc gaccgccgtc aatgcggcgg
      661 tatcgaccac gagaccggcg attcgccgaa tcgtgccggc cgactggagc tggtcgatga
      721 ggccatccgc ggtgtcggta cgcagaccag ctcgggtcag cagctccgtc acgggaatac
      781 cagcgatgcc gcgctcaccg accagcaagg tgaccgcctc gtcctcgccg gcctcctccg
      841 ctcccagacc gacgcgcaat cgttccaggc gtcggcgccc cgcggcggtg cgcatacccc
      901 cgcgcggcgg ccggggatca atcacgaacc cgccgccaat ggtgagaggg ggcgagtacg
      961 cgcggaggat gaatcgatcg ccgcgagtca acaccgccgc tgactcgagc cgcagccgca
     1021 cgaacgcgcg gcccccgggt tgcaactccc cgggagcgtc ctcatgctcg tcggcgtcgg
     1081 ccggctctgg ggacgcgccg gaacgaccga ccagcggacc gaccgcgacc cggcccagca
     1141 cctcactggt gccctgatga aagcgtacac gcgccccatg ccgcaggcga cgcgcaaccg
     1201 gaagcagatc tagtagcgca tccagacgcc tggtggcgtc gaaactcccc ggcgtgacgg
     1261 cggtatcgcc acgcgcgatc tccgccacct cgacccctga cagattcgcc gccacgcgtt
     1321 gtccggccac cgcgaccgac tgcgacaccc cgtggacctg caacccacgg atcttgacgt
     1381 ctcgcccagc cggcagcact cgcagcgcgg tacccgccgt catccggccg ga
//
LOCUS       DTVW01001058            1602 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2298426, whole
            genome shotgun sequence.
ACCESSION   DTVW01001058 DTVW01000000
VERSION     DTVW01001058.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1602)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1602)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1602
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2298426"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            503..976
                     /gene="aroQ"
                     /locus_tag="EYO87_13945"
     CDS             503..976
                     /gene="aroQ"
                     /locus_tag="EYO87_13945"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003568939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II 3-dehydroquinate dehydratase"
                     /protein_id="HIC67073.1"
                     /translation="MPVIHVLNGPNLNLLGKRQPEIYGHETLEDVERLCREAAGGHEI
                     RFLQSNWEGQIIDWIHEAREAACGIVINPAALTHTSVAVLDALNAFDGPVIEVHISQV
                     HRREAFRHHSYVSQRADGVIAGLGIEGYPAAIRRILSLTAPDRSGRSDDTGTGSP"
     gene            complement(1406..>1602)
                     /locus_tag="EYO87_13950"
     CDS             complement(1406..>1602)
                     /locus_tag="EYO87_13950"
                     /inference="COORDINATES: protein motif:HMM:PF00982.19"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="trehalose-6-phosphate synthase"
                     /protein_id="HIC67074.1"
                     /translation="AGAAETMQDALIINPHDPWELAEAMARAMRMSANERRRRHSALL
                     QGVVERDVGWWSASYLHALG"
BASE COUNT          234 a          550 c          585 g          233 t
ORIGIN      
        1 atccgggcgc agctggatgc gatccgggcc gccctcgacg atcatccggt ggtcgaactg
       61 ccctgcgtgc cgatccagcc ggcggggctg atggcgggca tgatcgacga cctggtcgcg
      121 cgcggcgttc gcggcatcgt gctggcggga ttcggcgccg ggaacgtccc gtccgatcgc
      181 gggctgaccg ggcaggccat ccgccgggcc ggggccgccg gtgtgctggt cgtgatcgcc
      241 agccgcccga tccggggcgc ggtgggcgat ttcgactatg ccgccggggc ctggatcgcc
      301 gggaccggcg cggtcccggg cggcgatgcg accccggtcg cgctggtcgc gaaagccacg
      361 atcctgagcg cggcggccgg ccatcacggc tgggacgccg cggtggtcag ggcgctgatg
      421 gcgcgggggc tggccggcga acggggctga cagcgccgcc gcgccgcgct agcaagggcc
      481 agtcccgcgc acgaggaagc ccatgcccgt catccatgtc ctgaacggcc cgaacctgaa
      541 cctgctggga aagcgccagc ccgagatcta tggccacgag acgcttgagg atgtcgagcg
      601 tctgtgccgc gaggcggcgg gcggccacga gatccggttc ctgcaatcga actgggaagg
      661 ccagatcatc gactggatcc acgaggcgcg cgaggcggcc tgcggcatcg tcatcaaccc
      721 cgccgcgctg acccatacct cggtcgcggt gctggacgcg ctgaacgcct ttgacggccc
      781 cgtgatcgag gtccatatca gccaggtcca tcggcgcgag gcctttcgcc accattccta
      841 tgtctcgcag cgcgccgacg gggtgatcgc gggtctggga atcgagggct atcccgccgc
      901 catccgccgg atcctgtcgc tgaccgcccc agaccgttcc ggccggtcgg acgatacggg
      961 aaccggcagc ccctgatccg ccccgtgatg tttccagaca gcccggagag gatggaaaaa
     1021 gccgccgaat ccctggccgc ggggaggagg aggggggcgg cagggttcgg cggctggccc
     1081 ttgatccggg ccgagggagg aagccgaggc tttcttgacc tcggtattgc catctggcgc
     1141 gatgattcga tgcctgtcac caatccgccg gggcgatgat gccgcgatgc ggcaagaaac
     1201 cggaattctg cccgctccgt gggcaagagc cgaagaatgc ggccatccgg gaacgacggt
     1261 tccggccgcg gcggcgatgt cgcgatcatc ccctcggccc cggcagccgg ggattcggtc
     1321 gtgatcccgc gcgcctgtcg tggcggccag gtccggggct tcggcgacgg cgtgaccggg
     1381 cccgccggcc cgcattgcgg ccggatcagc ccagggcgtg cagataactc gccgaccacc
     1441 agccgacatc gcgttccacc acgccctgca gcagcgccga atggcggcgg cggcgttcat
     1501 tggcggacat gcgcatggcc cgcgccatcg cctcggccag ttcccaggga tcgtgcgggt
     1561 tgatgatcag cgcgtcctgc atcgtctcgg cggccccggc aa
//
LOCUS       DTVW01001059            1548 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2298660, whole
            genome shotgun sequence.
ACCESSION   DTVW01001059 DTVW01000000
VERSION     DTVW01001059.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1548)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1548)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1548
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2298660"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..109)
                     /locus_tag="EYO87_13955"
     CDS             complement(<1..109)
                     /locus_tag="EYO87_13955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009565368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF808 family protein"
                     /protein_id="HIC67075.1"
                     /translation="MSGLIALLDDVAAISKVAATSIDDVAGQAAKAGAKA"
     gene            complement(270..833)
                     /locus_tag="EYO87_13960"
     CDS             complement(270..833)
                     /locus_tag="EYO87_13960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_004139846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fasciclin domain-containing protein"
                     /protein_id="HIC67076.1"
                     /translation="MKRFTTALAASAIALSLAGGAYADNTMVGGVEMLPTNNVVENAS
                     NAPNLTTLVSAVKAAGLVETLMGPGPFTVFAPTNAAFAKLPEKAVADLLKPENKDMLT
                     KVLTCHVAAADAMSPAIGKMIKDNGGSYAIDTVGGCKLTASINPDNQALQLTDENGTV
                     ATVTTPDVKQANGVVHVIDTVLMPKMM"
     gene            complement(932..>1548)
                     /locus_tag="EYO87_13965"
     CDS             complement(932..>1548)
                     /locus_tag="EYO87_13965"
                     /inference="COORDINATES: protein motif:HMM:PF10099.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67077.1"
                     /translation="ARLAQDPAFAQAVRDWQERLAGLALNLTPVMAPARARQRIREQL
                     GHGRAPLADDPSARAAPWWRGPIGALTGLVAVAAVALFLWMPGQTPTTAPVAADYQAQ
                     LVSEDDSLRVAARLDGREMEIALEQGTAAEGRDYEIWWIKPDGSDPISLGLVPRSGNA
                     RMELPSDLNPDEGVQIALSDEPQGGSPTGQATGPIVAIAPLTPT"
BASE COUNT          225 a          515 c          538 g          270 t
ORIGIN      
        1 ccgccttggc gccggccttg gcggcctgtc ccgccacatc gtcgatggac gtggccgcga
       61 ccttcgagat ggccgcgaca tcgtccagaa gcgcaatgag tccgctcatg cccgcatctg
      121 tccttgcccc gttttccgtc ccaaccgtga cgatgcaacg cgcggcgcgc aaggcggttc
      181 gggggttcgg acaggaaaaa ggcccgcgcg gaaggggatt cgcgcgggcc agtcgacccg
      241 ccggggaagg cgggccggtc tgtgccgtat tacatcatct tcggcatcag aaccgtgtcg
      301 atcacgtgga cgacgccgtt cgcctgcttg acatccggcg tggtcacggt cgcgacagtg
      361 ccgttttcgt cggtcagctg cagcgcctga ttgtcggggt tgatcgaggc agtcagtttg
      421 cagccgccca cggtgtcgat tgcatagctg ccgccattat ccttgatcat cttgccgatg
      481 gcgggcgaca tcgcgtccgc ggcggcgaca tggcaggtca ggaccttggt cagcatgtcc
      541 ttgttttcag gcttcagcag gtcagccacg gctttctcgg gcagtttcgc gaaagcggcg
      601 ttcgtgggcg cgaacacggt gaacggtccg ggtcccatca gcgtttcgac cagacccgcg
      661 gccttaaccg ccgagaccag cgtggtcagg ttgggcgcgt tcgaagcgtt ctcgacgacg
      721 ttgttcgtcg gcaacatctc gacgccgccg accatcgtgt tgtcggcgta ggcgcctccg
      781 gcaaggctga gggcgatggc ggatgcggca agcgcggtgg tgaagcgttt catgaatctt
      841 cctccgggtt ggaacagccg gttttcggct gcgataccca caggcacgga agcattcagg
      901 ataagttgcg cggccggcgg ggccgcccgg atcacgtcgg cgtgagcggc gctatcgcga
      961 cgatgggccc ggttgcctgc ccggtgggcg agccgccctg aggttcgtcc gacagcgcga
     1021 tctggacgcc ctcgtcgggg ttcagatccg agggcagttc catccgcgca ttgcccgatc
     1081 gcggcaccag gcccagcgag atcgggtccg aaccgtcggg cttgatccac cagatctcat
     1141 agtcgcggcc ctcggcggcg gtcccctgtt ccagcgcgat ctccatctcg cggccatcca
     1201 gccgggcggc gacgcgcagg ctgtcgtctt cggacacgag ttgtgcctgg taatcggcgg
     1261 cgacgggcgc ggtggtcggc gtctgtccgg gcatccacag gaacagggcg acggccgcga
     1321 ccgccaccag gccggtcagc gcgccgatgg gcccgcgcca ccacggcgcc gcgcgcgccg
     1381 acgggtcgtc ggccagcggc gcgcgtccat ggcccagctg ttcgcggatg cgctgccgcg
     1441 cacgggcagg cgccatcacc ggcgtcaggt tcagcgcaag gcccgccagt cgctcttgcc
     1501 agtcgcgcac ggcctgggcg aaggccggat cctgcgccag ccgcgcga
//
LOCUS       DTVW01001060            2147 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2299227, whole
            genome shotgun sequence.
ACCESSION   DTVW01001060 DTVW01000000
VERSION     DTVW01001060.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2147)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2147)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2147
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2299227"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..516
                     /locus_tag="EYO87_13970"
     CDS             <1..516
                     /locus_tag="EYO87_13970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease"
                     /protein_id="HIC67078.1"
                     /translation="MMEDVLKTDHRLIGMVQPEGDGLATIGCAGRVIAFSESDDGRLM
                     ISLKAVSRFRLADIEEGFAPYLQAHIDWTGFDRDLKGPERDPGLDRERLFPLLQRFLS
                     QHELSTDWGAAQEAEDEMLVNSLSMMLPFSNSDKQALLESPTLADRRELLQGLIEFAL
                     HGGGDTEERLQ"
     gene            513..710
                     /locus_tag="EYO87_13975"
     CDS             513..710
                     /locus_tag="EYO87_13975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010397661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Trm112 family protein"
                     /protein_id="HIC67079.1"
                     /translation="MSDLDHPGFDRHMLEALVCPVSHGRLSYDATRQELVSQTVGLAF
                     PIRSGIPIMLIDEARQIKADD"
     gene            703..1374
                     /locus_tag="EYO87_13980"
     CDS             703..1374
                     /locus_tag="EYO87_13980"
                     /inference="COORDINATES: protein motif:HMM:PF01694.20"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HIC67080.1"
                     /translation="MTEMQSPRAVPNTVRARRARPPLPRWVIGVMVLCTVIEAAFWLA
                     PLVGLGGLRRAADFLGGFWSPVFWAGHGIYPFQPLVMFASYGLLHSGLAHLAMNMLSL
                     MAIARELNVLIGARRMFVVYVVSQIAAALAFALMAPDAGPMIGASGAIFGLAGALIGH
                     AAVAGWRLNRPLGQLWRGVALIVVLNVALTVLIPSIAWEAHLGGAVTGLMMGAFTGHR
                     ATRRR"
     gene            complement(1375..2106)
                     /locus_tag="EYO87_13985"
     CDS             complement(1375..2106)
                     /locus_tag="EYO87_13985"
                     /inference="COORDINATES: protein motif:HMM:PF10026.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase"
                     /protein_id="HIC67081.1"
                     /translation="MTVWNIHLLNARNDLTRIMPQLRATLRDAVARTQGHADLPRFDL
                     IVRAGGDVIPEWGIGGHAPAPGLIQISLNPDRFDSGLMLRTLVHEFHHLIRWDGPGYG
                     KSLGEALVSEGLAGHFVRQVLDGKPDPWDAVTPASGAARAAMNEWARLGYDHARWFFG
                     KGDLRKWTGYGLGHRLVAEHLAQADGTETAATLAWSKADIFRAAMRRLVGSDGVPDER
                     EDAQGPRAAPADPAPEPEDIGPKPA"
BASE COUNT          307 a          733 c          716 g          391 t
ORIGIN      
        1 atgatggagg acgtgctgaa gaccgatcac cgcctgatcg gcatggtcca gcccgaaggc
       61 gacgggctgg ccacgatcgg ctgcgccggc cgggtcatcg ccttttccga atccgatgat
      121 ggacggctga tgatctcgct caaggcggtg tcgcggttcc ggctcgccga tatcgaggaa
      181 ggtttcgcgc cctatcttca ggcccatatc gactggaccg gcttcgatcg cgacctgaaa
      241 ggccccgagc gggatccggg gctggatcgc gaacgcctgt ttccgctgct gcaacgcttt
      301 ctgtcgcagc acgagctgtc aaccgattgg ggcgccgcac aggaggccga ggacgagatg
      361 ctggtcaatt cgctgtcgat gatgctgccc ttctcgaatt cggacaagca ggcgctgctg
      421 gaatcgccga ccctggcgga tcggcgcgaa ttgttgcagg gactgatcga attcgcgctg
      481 catggcggcg gcgacaccga ggaacggctg caatgagcga tctcgaccac cccggcttcg
      541 accggcacat gctggaggcg ctggtctgcc cggtcagcca cggtcggctc agctatgacg
      601 cgacccggca ggaactggtg tcgcagaccg tcgggctggc ctttccgatc cgttccggga
      661 tccccatcat gctgatcgac gaggcgcgcc agatcaaggc ggatgactga gatgcaatcg
      721 ccccgcgccg tccccaacac ggtccgcgcc cgtcgcgcgc gtccgcccct gccccgttgg
      781 gtgatcgggg tgatggtgct gtgcacggtg atcgaggccg ccttctggct ggcccccctg
      841 gtcgggctgg gaggcctgcg ccgcgccgcg gatttcctgg gcggcttctg gtcgccggtc
      901 ttctgggccg gtcacggcat ctatccgttt cagccgctgg tgatgttcgc cagctatggc
      961 ctgctgcatt ccgggctggc ccacctggcc atgaacatgc tgtcgctgat ggccatcgcg
     1021 cgcgaattga acgttctgat cggcgcgcgg cgcatgtttg tggtctatgt cgtcagccag
     1081 atcgccgcgg ccctggcctt tgcactgatg gcccccgatg cgggcccgat gatcggcgcc
     1141 tcgggcgcga tcttcggcct ggccggggcg ctgatcggcc atgccgccgt ggcgggctgg
     1201 cgcctgaatc gcccgctggg ccagttgtgg cgcggcgtgg cgctgatcgt ggtgctgaac
     1261 gtggcgctga ccgtgctgat cccctcgatc gcctgggagg cgcatctggg cggcgccgtc
     1321 accggtctga tgatgggcgc cttcaccggc catcgcgcga cgcgccggcg ctgatcatgc
     1381 cggcttcggg ccgatgtctt ccggttcggg cgcgggatcg gccggcgcgg ccctcgggcc
     1441 ttgcgcatct tcccgttcgt cgggcacgcc gtcgctgccg accagccgcc gcatcgcggc
     1501 gcggaagatg tcggccttgc tccatgccag cgtcgccgca gtctcggtcc cgtccgcctg
     1561 cgccagatgc tcggccacca gccggtggcc cagcccgtag ccggtccatt tgcgcaggtc
     1621 gccctttccg aagaaccagc gtgcatggtc atagcccagc cgcgcccatt cgttcatcgc
     1681 cgcccgcgcc gcccccgagg ccggcgtcac cgcatcccag ggatcgggtt ttccgtccag
     1741 aacctgccgc acgaaatgcc ccgccaaccc ttcgctgacc agcgcctcgc ccagcgattt
     1801 gccatagccc ggcccgtccc agcggatcag atggtggaat tcgtgaacca acgtgcgcag
     1861 catcaggccg gaatcgaatc ggtcggggtt caggctgatc tggatcagcc ccggcgccgg
     1921 ggcatggccc ccgattcccc attccggaat gacatcgccg cccgcgcgca cgatcagatc
     1981 gaaacgcggc agatcggcgt ggccctgcgt ccgggccacc gcgtcccgca gcgtggcacg
     2041 aagctgaggc atgatgcgcg tcagatcatt gcgcgcgttc agaagatgaa tgttccagac
     2101 cgtcatggca ggtattttcg caggttcgaa agcgacgcgc cagcggc
//
LOCUS       DTVW01001061            1819 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2299712, whole
            genome shotgun sequence.
ACCESSION   DTVW01001061 DTVW01000000
VERSION     DTVW01001061.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1819)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1819)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1819
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2299712"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            27..>1819
                     /gene="glgX"
                     /locus_tag="EYO87_13990"
     CDS             27..>1819
                     /gene="glgX"
                     /locus_tag="EYO87_13990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018000292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen debranching protein GlgX"
                     /protein_id="HIC67082.1"
                     /translation="MKNPIAMKAGRPTPLGATFDGAGVNFALFSQHGARVTLCLFDER
                     NRETGRIDLPERDGHVWHGYVAGLRPGQRYGFRVHGPYDPHQGHRFNPNKLLIDPYAK
                     RLTGSPRNHDALFGYRAGHADEDLSFDRRDSAQYMPKCVVVDPSFSWGKDRPLRTPWT
                     ETVIYEAHVKGLTAGRKDIPARGTFLAMASDPILDHLNALGVTAIELLPVHAFADDRF
                     LTDKGLTNYWGYMSYGFFAPEPRYMSGGDIAEFQQMVARFHKAGIEVILDVVYNHTAE
                     GNRMGPTLSFRGLDNASYYRLGEDRRYYVNDAGTGNVLDLDNPFVLRLVMDSLRYWVE
                     TMHVDGFRFDLCSVLGRTQGVFDRDGPFFRAVRQDPVLNRVKLIAEPWDIGPGGYQLG
                     AYPEPFAEWNDRFRDQVRGFWRGDAGLVGKLAKRVAGSAARFDHDGRPATSTVNFVAA
                     HDGFTLMDTVSYEHKHNEANGEENRDGHDHNLSGNCGVEGPSDDPAVAECRARRRRNL
                     MATLLLSQGTPMILAGDELGNSQGGNNNAYCQDNEIGWVDWSRSDPDFLDFCRRAIAF
                     RKAQPILRQRRFLHSQPREQDGLPDLFWHRA"
BASE COUNT          316 a          596 c          588 g          319 t
ORIGIN      
        1 ctctatgccg ggcagccgac gaccagatga aaaatccgat tgcgatgaag gccggccgcc
       61 cgacgccgct gggggccacg ttcgacggcg cgggcgtgaa tttcgccctg ttctcgcagc
      121 atggcgcgcg cgtgacattg tgcctgttcg acgagcgcaa ccgcgagacc gggcggatcg
      181 acctgcccga acgcgatggc catgtctggc acggctatgt ggccgggctg cggccggggc
      241 aacgctatgg ctttcgtgtc catggcccct atgacccgca tcagggccac cggttcaatc
      301 ccaacaagct gctgatcgac ccctatgcca agcgcctgac cggcagcccg cgcaatcatg
      361 acgcgctgtt cggctatcgc gccggccacg ccgacgagga tctcagcttc gatcgccgcg
      421 acagcgccca gtacatgccc aaatgcgtcg tcgtcgatcc cagcttttcg tggggcaagg
      481 accgtccgct gcggacgccc tggaccgaga ccgtgatcta cgaggcgcat gtgaagggtc
      541 tgaccgccgg acgcaaggac attccggccc gcgggacgtt cctggccatg gcctcggatc
      601 cgattctcga tcacctgaac gcgcttggcg tcaccgcgat cgaattgctg ccggtccacg
      661 cctttgccga tgaccgtttc ctgaccgaca aggggctgac gaattactgg ggctacatgt
      721 cctatggctt cttcgcgccc gagccgcgct acatgtcggg cggcgacatc gccgaatttc
      781 agcagatggt cgcgcggttc cacaaggccg gcatcgaggt gatcctggac gtggtctaca
      841 accacaccgc cgagggcaac cggatggggc cgaccttgtc ctttcgcggg ctcgacaacg
      901 cctcttacta ccggctgggc gaggatcggc gctattacgt caacgatgct ggcaccggaa
      961 acgtgctgga tctggacaat cccttcgtgc tgcgactggt gatggattcg ctgcgctact
     1021 gggtcgagac gatgcatgtc gacggattcc gtttcgatct gtgttcggtt ctggggcgca
     1081 cgcagggcgt cttcgaccgc gacggaccat tctttcgcgc ggtgcgtcag gatccggtgc
     1141 tgaatcgcgt caagctgatc gccgagccct gggatatcgg gcccggcggc tatcagctgg
     1201 gcgcctatcc cgagcccttc gcggaatgga acgaccggtt tcgcgaccag gtgcgcggct
     1261 tctggcgcgg cgatgcgggt ctggtgggaa agctggccaa gcgcgtggcc ggatcagccg
     1321 cgcggttcga ccatgacggc cggcccgcaa cctcgaccgt caacttcgtc gccgcccatg
     1381 acggcttcac gctgatggat acggtcagct acgagcacaa gcacaacgaa gccaatggcg
     1441 aggaaaaccg cgacggccac gaccacaacc tgtcgggcaa ttgcggggtc gaggggccct
     1501 cggatgatcc cgccgtggcc gaatgccgcg caaggcggcg gcgcaacctg atggcgacgc
     1561 tgcttttgtc gcagggcaca ccgatgatcc tggcgggcga cgagctggga aattcgcagg
     1621 gcggaaacaa caacgcctat tgccaggaca acgagatcgg ctgggtggac tggtcccgat
     1681 cggacccgga ttttctggat ttctgccgcc gcgccatcgc cttccgcaag gcccagccga
     1741 tcctgcggca gcggcgcttc ctgcacagcc agccgcgcga acaggacggc ctgcccgacc
     1801 tgttctggca ccgcgccga
//
LOCUS       DTVW01001062            1178 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2303032, whole
            genome shotgun sequence.
ACCESSION   DTVW01001062 DTVW01000000
VERSION     DTVW01001062.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1178)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1178)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1178
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2303032"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(105..>1178)
                     /locus_tag="EYO87_13995"
     CDS             complement(105..>1178)
                     /locus_tag="EYO87_13995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011569290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyguanosinetriphosphate triphosphohydrolase"
                     /protein_id="HIC67083.1"
                     /translation="WQRDRDRIIHSSAFRRLKHKTQVFVEHDGDEYRGDYFRTRLTHT
                     IEVAQVARTIAGALRLNTDLAETVALAHDLGHPPFGHTGEDALSALMQPYGGFDHNAQ
                     ALRIVTRLERHYADFDGLNLTWEALEGIAKHNGPVEPPLPYALAEVNGDWDLELSSNA
                     SAEAQVAAVADDVAYNHHDLHDGLRAELFTEEELAELPVIGPAFAEVDRLYPGLDRMR
                     RRHEALRRVFGVMVEDVIAVAENRLAGLQPQSAQEIRDMDGPIIRFSKPLYQNIKAIK
                     SFLFTRMYRAPSVVDERVRVTAILNELFPLFLSDPAQMPPQWHSAAEAAPDETRRARI
                     VLDYVSGMTDRYAISEAQRLLTG"
BASE COUNT          185 a          390 c          400 g          203 t
ORIGIN      
        1 tgcaccggcg tggcgatgac gagggctcga tccgggactg aggccgatcg gtcttgcggc
       61 gccgcatgac atggcgcggc acggacagcc cgtgtcgcgc cctttcaacc ggtcagcagc
      121 cgctgcgcct ctgatatcgc atagcggtcg gtcatccccg agacgtagtc cagcacgatg
      181 cgggcacggc gggtttcatc gggcgccgcc tcggccgcgc tgtgccattg cggcggcatc
      241 tgggcggggt ccgacaggaa cagcgggaac agctcgttca ggatcgccgt cacccggacc
      301 cgttcatcca cgaccgaggg cgcgcgatac atgcgcgtga acaggaacga cttgatcgcc
      361 ttgatgttct ggtagagcgg cttggaaaag cggatgatcg gcccgtccat gtcgcggatt
      421 tcctgcgccg attgcggctg caggcccgcc agccggttct cggccacggc gatgacgtcc
      481 tcgaccatga cgccgaagac ccgccgcagc gcctcgtgtc gccgccgcat ccggtcgagg
      541 ccgggataga ggcggtccac ctcggcgaag gcgggaccga tcacgggcaa ttcggccagt
      601 tcctcctcgg tgaacaattc ggcccgcaga ccgtcatgca gatcgtggtg gttataggcc
      661 acgtcatcgg ccacggccgc cacctgcgcc tcggcgctgg cattgcttga aagctccaga
      721 tcccagtcgc cgttcacctc ggccagggca tagggcaggg gcggctccac cggcccgtta
      781 tgcttggcga tcccctccag cgcctcccat gtcaggttca gcccgtcgaa atcggcgtag
      841 tgccgttcca gccgggtgac gatccgcagc gcctgcgcgt tgtgatcgaa gccgccatag
      901 ggctgcatca gcgcggataa cgcatcctcg ccggtatggc caaagggggg gtggcccaga
      961 tcgtgggcca gcgccaccgt ctcggccagg tcggtgttta gccgcagcgc gccggcgatg
     1021 gtgcgggcga cctgcgccac ctcgatcgtg tgggtcagcc gggtgcggaa gtaatcgccg
     1081 cgatattcgt cgccgtcatg ttcgacgaag acctgcgtct tgtgcttcag ccgccggaag
     1141 gcgctggaat ggatgatccg gtcgcggtcg cgctgcca
//
LOCUS       DTVW01001063            5373 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2303127, whole
            genome shotgun sequence.
ACCESSION   DTVW01001063 DTVW01000000
VERSION     DTVW01001063.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 5373)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5373)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5373
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2303127"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            708..2066
                     /locus_tag="EYO87_14000"
     CDS             708..2066
                     /locus_tag="EYO87_14000"
                     /inference="COORDINATES: protein motif:HMM:PF02449.13"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67084.1"
                     /translation="MWGGVFAGCAAFLAIVASPVMADVDLAKLSVTPNPRLGLAFPGS
                     QTRYYRAIAEAGIGVTRLSASWSRIEPRQGRFDFVGLDQRVKALQDLGIQPFLTFESD
                     ADWATDKATQKVKNAMPTDLGLWQRFIRTVVDRYDGDGTGDMPGLRFPVRYYQAANEW
                     ISDSNRSGGWAASPDDLISYVNVAQAAVKAEDPDAIFVMGGIASFNSDVLVVQQERKN
                     IEVRQSWSKTSETVLSQAQMLGPEIRAIIVDKVLPVLKRSRYDIASVHLYGPESRDID
                     RLTLVRRLSGRPVLSTECGGPTLDYGGTYTPEAHFRAVIQRNLNVLSTGAPFCLWFRL
                     GEGPGATYGNTRTALYEGPGRPKPGVFAYRLLSRLIDPQAQVRREADGLFVIRRGDAT
                     QISVAWGPAARTLRDQARGQGADILCLAEPGRGLLAADPGRCKADAMTLSGSGLNAIL
                     SP"
     gene            2081..3760
                     /locus_tag="EYO87_14005"
     CDS             2081..3760
                     /locus_tag="EYO87_14005"
                     /inference="COORDINATES: protein motif:HMM:PF02706.13"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67085.1"
                     /translation="MLDHYRELLRHFWKTIVIGALVAGGLTLALSMLLLRAAPIYEAS
                     VTLNMQPSTEELRFNSSFLGVSQFNPATIIAQTHIERLLSRKVAGRAIDILTEEAGGT
                     LQIEPPTAFRRFKAAVWRWYNILNFGYFQPQPVRETYISDLLGATKVETVEGSYILLV
                     SVSHSDPALAARAANALAQAYVDQTRDEFRTDAAQVDETLQNVIAAREKDLARYAAEY
                     QNTASNFGITNLDQERSIMLDTRAAARAALQNAEVELALLDTTIGSLEASITRASDAE
                     TVRQLRQTLAETQASRAGNEARLQFRSQRVSDADQALRELKTAGEALAQIEQRITETE
                     ADLTELQNRQVAAGVAREAQLSQIRTIDSASVPVYPKFPKVLINTIVATILGSILVLV
                     PIVAMDVLGDRARTSEDLRRTLGTRVLPPVTRRLLRQARRYLDGGKPGTALQRYAHAV
                     GRRFVSDSPHRWPSKALLVTAFGTQADVTALHDLFKAVLKIAAPTAADGGVPEAVELP
                     PIARIADWSVYKDRQVVVGLRSGVVDRDELNALGRSDAVASGPVSYATLLP"
     gene            3757..4998
                     /locus_tag="EYO87_14010"
     CDS             3757..4998
                     /locus_tag="EYO87_14010"
                     /inference="COORDINATES: protein motif:HMM:PF01522.19"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67086.1"
                     /translation="MNPVPHSPADRRTCRKKAFRRAALIALCGLVAGAVGVTLGLPAL
                     GLVLALAGFLLAWRALRKPGGVPILVYHSVSPDAGWLPWARNISVRPEVLDIHLRTLR
                     RDGWNIVSTEDLVAARANGASLPPQAVVLQFDDAYLDNYLFAAPILRRHNAPATIFAS
                     VDFVEPGEVPRGADRSCGPEAWQGYMNVAELRHLEADPLFAVEAHGTNHARIPVSDRT
                     SGLVGLDWKRHAPLTWATDPENKSRWFEAVTPPPSLRPDASLPETDSALAGRWWRDGS
                     AEDEAAFRARVSQMLSQAYRELAALLDRAPRVMAWPFDRFDPVSVDAAQEAGFVAVTG
                     GRQDNRREDHVPGNGPVILSRVHLQDRAFGGGPLWLEALALRARVNTAAGWLVWHPVT
                     ALANRLRRRRLGPSGYDRVAS"
     gene            4995..>5373
                     /locus_tag="EYO87_14015"
     CDS             4995..>5373
                     /locus_tag="EYO87_14015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67087.1"
                     /translation="MTGFLRFMPLTLGLAVLAALIVIVAGTITNPVAALALPVGLFSG
                     LLLFAQPFLGVLALTVFSHLDAIQKLFFGFLPVSAFKLIAAGTSLVVLARAIDMRNSI
                     RTAARDPVAMFAFLTTGMAVVSIV"
BASE COUNT          888 a         1756 c         1717 g         1012 t
ORIGIN      
        1 caggtgacgc gtgcgcgcct gatcgccgcg cgcgacggcg atacgacgat ggaaatcagc
       61 gacgaggtcc agaagcagct ggatgaaaac caggccgagc cactggtgac tgcggcagcc
      121 acgctgcttg ccgcgcttgg cgaggttcag gacgcgcgcc gccaggcaca gggcgaccag
      181 ctccggctgg cgcgggaaga ggccgaggcc ttcgccgagc gtcgcacatt gttgaacaac
      241 cagctcgaca cgcttctcaa ggctctggcc gatcagcaaa atctgcgcga ccgcggcctt
      301 gcgcggtcgg atcgcgtggt ccagttgacc ctggacacgt cccgcctgcg cgttgacatc
      361 ctcgaatcga tcggcctgga agcggccgcg cgacagaaac ttgaacgcgc ggcttcggcg
      421 ccggccacgg atgagacaca gttgcgggca gacctctcgg ggcttcttgc cgagaccgag
      481 gccgcgatcc tggaaacgac cacccggctt gagcgatccc gtgccttcgt gcgcgaattc
      541 gcaagcagcg ccgacatcgc cgaagagttc gatgtaagcg tgacctatcg catctatcgc
      601 cggaacggcg aggccaccga ggtggtcgag gcagggcccg atacccggct tcaccccggc
      661 gacggtctgg aggtggtgcg catggtcgat atccctgggg cgccgtgatg tggggcgggg
      721 ttttcgcggg ttgcgccgct ttcttggcaa tcgtggcttc accggtcatg gccgatgttg
      781 atctggcgaa actgagtgtc acaccaaacc cacggctggg tctggccttt cccggttcgc
      841 aaacccgcta ttacagagcc atcgccgagg ccgggatcgg cgtgacccgt ctgtcggctt
      901 cctggagccg gatcgagccg cgccagggtc gtttcgactt cgtcggcctg gaccaacgtg
      961 taaaggcgct tcaggatctt ggcattcagc cgttcctcac ctttgaatcc gacgccgatt
     1021 gggcaaccga caaggccacg caaaaggtca agaacgcaat gcccaccgac ctgggattgt
     1081 ggcaaaggtt tatccggacc gtcgtggacc gctatgatgg tgacgggacg ggcgacatgc
     1141 cgggtctgcg gtttccggtc cgctattatc aggccgcgaa cgaatggatc agcgacagca
     1201 accgctcggg tggctgggcc gcctcgccgg acgatctgat ctcttacgtc aatgtcgcgc
     1261 aggcggcggt caaagccgaa gacccggacg cgatcttcgt gatgggcggc atcgcctcgt
     1321 tcaattccga tgtgctggtg gtgcagcagg agcgcaagaa tatcgaggtt cgccaaagct
     1381 ggagcaagac gtccgagacc gttctttcgc aagcgcagat gcttggcccc gagatccgcg
     1441 ccatcatcgt cgacaaggtt ctgcccgttc tgaaacgcag caggtacgat atcgcgtcgg
     1501 tgcatctcta cggtcccgaa tcgcgtgaca tcgaccggct gacgctggtg cgaaggcttt
     1561 cgggacgtcc tgtcctttcg accgaatgcg gcggcccgac gcttgattac ggcgggacct
     1621 atacacccga agcgcatttt agggcggtca tccagcgcaa cctgaatgtc ttgtcgaccg
     1681 gcgcgccatt ctgtttgtgg ttccgtctgg gagaaggtcc cggcgcgaca tacggcaata
     1741 cccgcaccgc gctgtatgaa gggcccgggc gaccgaagcc cggcgttttc gcctatcgcc
     1801 tgctgtcgcg cctgatcgat ccccaggctc aggtccgccg cgaggctgac gggctttttg
     1861 tcatacggcg tggcgacgcg acgcagattt cggtcgcctg gggtccggct gcgcgcacct
     1921 tgcgcgatca ggcacgcggt cagggggccg atatcctgtg cctcgccgaa cccggtcgtg
     1981 gccttctggc cgctgacccc ggacgctgca aggccgatgc gatgaccctc tccggttccg
     2041 gactgaacgc gatcctctct ccttaggcgg ttttcatttc atgctcgatc actacagaga
     2101 attgctgcgc catttctgga agaccatcgt gatcggcgcg ctggtcgcgg gtggcctgac
     2161 cctggccctg tcgatgctgc ttctgcgagc ggcgccgata tacgaggctt cggtgacgct
     2221 gaacatgcag ccttccacgg aagagcttcg cttcaacagc agctttctcg gcgtcagcca
     2281 gttcaacccg gccacgatca tcgcgcagac ccatatcgaa cggctgctgt cgcgcaaggt
     2341 cgccggccgc gccatcgaca ttctgacaga ggaagccggc ggcacgctgc aaatcgagcc
     2401 tcctaccgcc ttcaggcgat tcaaggctgc ggtctggcgc tggtacaaca ttctcaactt
     2461 cggctacttc cagcctcaac ccgtcagaga aacctatatc agcgacctcc tcggcgccac
     2521 caaggtcgag accgtcgagg gttcgtatat tcttctggtg tcggtatctc acagcgatcc
     2581 cgccctggcc gcccgcgcag ccaacgcgct ggcgcaggcc tatgtggacc aaacccgcga
     2641 tgagtttcgc accgatgcgg cccaggtcga cgaaaccctt cagaacgtga tcgccgcgcg
     2701 cgagaaggat ctggccagat acgcggcaga ataccagaac acggccagca atttcggcat
     2761 caccaacctt gatcaggaac gatccatcat gcttgacacg cgcgcggccg cccgcgccgc
     2821 gttgcagaat gccgaggtcg aactggccct tctggatacg acgatcggct cgctcgaggc
     2881 ttcgatcacg cgcgcctcgg atgccgaaac ggtgcgccag ttgcgacaga ccctggcgga
     2941 aacacaggct tcccgcgccg ggaacgaggc ccggctgcaa ttccgcagcc agcgggtctc
     3001 ggatgctgat caggctctgc gagaactgaa aacggccggc gaggcgctgg cacagatcga
     3061 acagcgcatc accgagaccg aggccgatct caccgaactg caaaatcgtc aggtggctgc
     3121 aggggtcgcg cgcgaggcgc agttgtcgca gatccggacc atcgattctg caagcgttcc
     3181 cgtctatccg aaatttccca aggttctgat aaacacgatc gtggccacca tcctcggcag
     3241 catcctggtg ctggttccga ttgtcgcgat ggacgtgctg ggcgaccgtg cccgaacatc
     3301 agaggatctg cgcaggaccc ttggcacccg cgtcctgccg ccggtcacgc gaaggcttct
     3361 gcgccaggcc cggcgctatc tcgatggcgg caagccgggc acggcactgc agcgctatgc
     3421 ccatgcagtc gggcggcgct tcgtttcgga cagcccccac cgctggccgt ccaaggcgct
     3481 tcttgtcacc gcattcggca cgcaggccga tgtcacggcc ctgcatgacc ttttcaaggc
     3541 ggtgctgaag atcgccgcac cgactgctgc cgatggcggt gttcccgagg cggtcgaatt
     3601 gccgccgatc gcgcggatcg cggattggag cgtctacaag gatcgccagg tggtggtcgg
     3661 cctgcgctct ggcgtcgtgg atcgcgacga actgaacgcc cttggccgca gcgatgcggt
     3721 cgcgtcaggg ccggtatcct atgcgacctt gctgccatga acccggtccc gcattcgccg
     3781 gccgaccgcc ggacctgccg caagaaagcc tttcgtcgcg cggcactgat cgccctctgc
     3841 ggccttgtcg cgggcgccgt gggagttacg cttggtctgc ctgccctggg tctggttctt
     3901 gcccttgcgg gttttcttct ggcgtggcgc gcgctgcgca agcccggtgg cgtgccgatt
     3961 ctcgtctatc acagcgtttc acccgatgcg ggctggctgc cctgggccag aaacatatcg
     4021 gtccgtccgg aagtgctgga tatccacctt cgcaccctgc gacgcgacgg ctggaacatc
     4081 gtctcgaccg aggatctggt cgcggcgcgc gcgaacggtg cttctctgcc cccgcaggcg
     4141 gtggtgctgc aattcgacga cgcctatctt gacaactatc ttttcgccgc gccgatcctg
     4201 cgccgccaca acgccccggc gacgatcttt gcctcggtgg atttcgtcga accgggcgag
     4261 gtcccgcggg gggccgaccg ctcctgcgga ccggaggcct ggcaaggcta tatgaatgtc
     4321 gccgagttgc ggcatcttga agccgatccg cttttcgcgg tcgaggcgca tggcaccaac
     4381 catgcccgca tcccggtttc ggatcggacg tccgggctgg tcggtcttga ctggaaacgc
     4441 catgccccgc tgacctgggc gaccgatccg gaaaacaagt cgcgctggtt cgaggccgtg
     4501 acaccgccgc cttcgctccg gcccgacgca tctctgcccg aaaccgactc ggcgctggca
     4561 ggccgatggt ggcgtgacgg ctcggccgag gacgaggccg cgttccgggc ccgcgtgtcg
     4621 cagatgctga gccaggcata ccgggaactg gcggcacttc tggatcgtgc gccgcgcgtc
     4681 atggcctggc ccttcgatcg cttcgatccc gtttcggtcg atgccgcgca agaggcgggt
     4741 ttcgtggcgg tcactggcgg tcgccaagac aaccggcgcg aagaccacgt ccccggcaat
     4801 ggtcccgtga tcctcagccg cgttcatctt caggaccggg ccttcggcgg cgggccgctg
     4861 tggctcgagg cgctggcgct gcgggcccgg gtcaacaccg ccgcaggctg gcttgtctgg
     4921 catccggtga cggcacttgc caaccggctg cgccgccgcc ggctggggcc atcgggctat
     4981 gacagggtgg cgtcgtgaca gggttcctgc gcttcatgcc attgacgctg ggccttgcgg
     5041 ttcttgcggc gctgatcgtg atcgttgccg ggaccataac caacccggtg gccgcgcttg
     5101 cccttccggt cgggctgttc tcgggcctct tgctgtttgc gcagccgttt ctgggagtgc
     5161 tggcgctgac ggtgttctca catctcgacg ccatccagaa actgttcttc ggctttctgc
     5221 cggtctcggc cttcaagctg atcgccgcag gcacctcgct ggtggtgctg gcccgagcga
     5281 tcgacatgcg aaacagcatt cggacagccg cccgcgatcc ggtggccatg tttgcctttc
     5341 tgacgacggg catggccgtc gtcagcatcg tgg
//
LOCUS       DTVW01001064            2540 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2303747, whole
            genome shotgun sequence.
ACCESSION   DTVW01001064 DTVW01000000
VERSION     DTVW01001064.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2540)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2540)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2540
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2303747"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..856
                     /locus_tag="EYO87_14020"
     CDS             <1..856
                     /locus_tag="EYO87_14020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009570043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="divalent metal cation transporter"
                     /protein_id="HIC67088.1"
                     /translation="ITYAILIFERQGFRPMELIIGALVIVIGLSYLAETLIAPIDWKS
                     AGIGMFQPALPDGNALIIAVGIIGATVMPHAIYLHSGLTQNRIEIRDERDRRRVLKFS
                     NIEVVVALAIAGMVNMAMVMMAASAFHMGYPEVAEIETAYYTLTPLLGAAAAGIFLAS
                     LIASGISSSVVGTMAGQMIMQGFLRFRVPIWLRRLVTMLPAFVVVAMGVNVTQALFLS
                     QVVLSIALPVPMIALLIFSMRKDIMGEFAVGKLLGSLAAMAAIIVLGLNFVLLGDAFG
                     IPVPFLDG"
     gene            complement(990..1457)
                     /gene="ruvX"
                     /locus_tag="EYO87_14025"
     CDS             complement(990..1457)
                     /gene="ruvX"
                     /locus_tag="EYO87_14025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RuvX"
                     /protein_id="HIC67089.1"
                     /translation="MIHEDIADFAATLPRTGALAGLDLGTKTIGVAVSDGLRQVASPL
                     TVIRRRKFTLDAAALLSAAAERGLAGLVLGLPRNMDGSEGPRAQSTRAFARNLSRLTD
                     LPIGFWDERLSTVAAERALLEADTSRKRRAEVIDQVAAAYILQGALDRLRNLP"
BASE COUNT          381 a          850 c          864 g          445 t
ORIGIN      
        1 catcacctat gccatcctga tctttgaacg tcagggattt cgcccgatgg agctgatcat
       61 cggcgcgctg gtcattgtga ttggcctttc ctatctcgcc gaaacgctga tcgcgcccat
      121 cgactggaaa tccgccggga tcggcatgtt tcagccggcc ctgccggacg gcaatgccct
      181 gatcatcgcg gtcggcatca tcggtgccac cgtgatgccc catgccatct acctgcattc
      241 cggtctgacc cagaaccgca ttgaaatccg cgacgaaagg gaccgccgcc gggtgctgaa
      301 attctcgaac atcgaggtcg tggtcgcgct tgcgatcgcc ggcatggtca acatggcgat
      361 ggtgatgatg gcggcaagcg cctttcacat gggctacccc gaggtggccg agatcgagac
      421 cgcctattac acgctgacgc cgctgcttgg cgccgcggcc gccggcatct ttcttgcctc
      481 gctgatcgcc tcgggcattt caagctcggt cgtcggcacg atggccgggc agatgatcat
      541 gcagggtttc ctgaggtttc gcgtcccgat ctggctgcga agactggtca cgatgcttcc
      601 cgccttcgtc gttgtcgcga tgggcgtgaa cgtgacgcag gcgcttttcc tcagccaggt
      661 ggtgctttcc atcgccttgc ccgtccccat gatcgcgctt ctgatctttt ccatgcgcaa
      721 ggacatcatg ggcgaattcg cggtgggaaa gctgctgggt tcgctggccg ccatggcggc
      781 gatcattgtg ctggggctga atttcgtgct gctgggcgat gccttcggga taccggtgcc
      841 gttcctggac ggttgattgc ggtcccgagg ccggcagcgg ggccgtgagg agccgcccac
      901 cgcacgtcgt tgcggaatcc ggctgagctg aaatccgcgg ccgaccccga ccggattcgc
      961 cgggcgcccg gatgcggctg ccagcggcgt cagggcagat tgcgcagccg gtccagggcg
     1021 ccctgcaaaa tataggccgc cgccacctgg tcgatgacct ctgcgcgccg cttgcgcgag
     1081 gtatcggcct caagcagcgc ccgttcggca gcgacggtcg aaaggcgttc gtcccagaag
     1141 ccgataggca ggtccgtcag gcgcgacagg ttgcgggcga aggcgcgggt ggattgggcg
     1201 cggggaccct cgctgccatc catgttgcgc ggcaggccaa ggaccaggcc ggcaaggccg
     1261 cgctcggctg cggctgatag cagcgcggcc gcgtccagcg tgaatttccg gcggcggatt
     1321 accgtcagcg gagaggccac ctgccgcaag ccgtcgctga ccgccacgcc gatggtcttg
     1381 gtgccaagat caagcccggc cagcgcgccg gtgcggggca gggtcgcggc aaaatccgcg
     1441 atatcctcgt ggatcactcg gtcagccccg aggattgcgc cgccgcgcgt accgtcgcca
     1501 gcgcctgagg cgccgaggcg aaacgctgct gcgcctcgtc ccagatggcg cgcgcccgat
     1561 cggcattgcc cagcaccgtc agggacgtga tcagccgggc ccattcctcg ggcgaaccgc
     1621 cctgttcggc cagccgcgcc tcgagctgcg agaccatgcc gccgatcatc tcgcggcgtt
     1681 gctcgggcgt catgttctcg gctgcggcca tcgcctcggc gtcgggaccg ggcaaagccg
     1741 gggccgtcgc cgagggcggc gtatagtccg gctgacccgc cagccatgca agatcggcga
     1801 tggattggct gatcggcgga atccagggcg catcgggagg tccttcctca agaagctggc
     1861 gccacagcgg aaaggcgcgg tcgggacggc cgttctgaag ttgcaggatg cccagcatat
     1921 agcgcgcctg cggctgcgtc gggtcggtct gcagcgaccg ggccagaacc gcctcggcct
     1981 cgggcgtgat caggccacct gcggcttcgg tcatcagcgc cgacagacgc atcagttgtt
     2041 ccgcgctggc gcggtcgccc agaacctcga tcagccgctg ctgggcctcg cgtgcggccc
     2101 ggacattgcc cagccgcgcc tcgtgcgtgg ccagaagcga aaggccctcg ggatcctgcg
     2161 gatttttggc aaccgcctcg cgcagcttct gaaccagatt ctcgtattcg gcatcgacgg
     2221 tcggcgcctg ggccgcgggt gcctgggctt cggcctgttc ctggctgggc cggctttcat
     2281 aggcctgctg ggccagcgca aggcgccgcg caagcggcag atcggccacg ccgggcgcgc
     2341 cttcgcgcag atacactgcc atgccgccgc caagggccac caacaggatc accccggccc
     2401 agagtgcggt gccgccgcgg gcgggggcag gggcatcggc catgcggcgg tcggcatcca
     2461 gcaccttgcg gccgatctcg gtgtgcaggc gctgcgcatc ctcgggggcg atcacgccgc
     2521 gttccagatc gcgatccacc
//
LOCUS       DTVW01001065            3523 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2307958, whole
            genome shotgun sequence.
ACCESSION   DTVW01001065 DTVW01000000
VERSION     DTVW01001065.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3523)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3523)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3523
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2307958"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..204)
                     /gene="ccmI"
                     /locus_tag="EYO87_14030"
     CDS             complement(<1..204)
                     /gene="ccmI"
                     /locus_tag="EYO87_14030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome biogenesis protein CcmI"
                     /protein_id="HIC67090.1"
                     /translation="MFWIFSAALTLLVAAAIFLPIWRARDGARAESSATYDLRVYRDQ
                     LREVDRDLERGVIAPEDAQRLHTE"
     gene            418..1674
                     /locus_tag="EYO87_14035"
     CDS             418..1674
                     /locus_tag="EYO87_14035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sarcosine oxidase subunit beta family protein"
                     /protein_id="HIC67091.1"
                     /translation="MSQSRRYSVFAIAREAFREHRGWSRAWASPEPRQRYKVVIVGAG
                     GHGLATAYYLGRNFGITDIAIIEKGWLGGGNTGRNTTIIRSNYLQDPSAAIYDKSLKL
                     YETLSQDLNYNVMFSPRGLIMLAQTEHEVRGYKRTVHANNLQGVSTEWIEPARLKELV
                     PIINLDGPRYPVLGGLYQARGGTARHDAVAWGYARACSDMGMHVIQNCEVTGIETDGG
                     AVQAVNTSKGRIGCEKLALVVAGHSSQLAGMAGFRLPIESVALQALVSEPIKPCMDVV
                     VMANTVHGYMSQSDKGEMVIGGGTDGFNNFTQRGSWHHVEETVRALVETFPMISRLKM
                     LRQWGGIVDMTGDRSPILSTTPVDGIFVNCGWGTGGFKAIPGSGWAMAELVARGRPGP
                     LAAGFGLNRFREGRFVDESVAAGVAH"
     gene            1765..2040
                     /locus_tag="EYO87_14040"
     CDS             1765..2040
                     /locus_tag="EYO87_14040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003573021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67092.1"
                     /translation="MAEGNNNNNNLYFIVGGIVVVVALLFFFMSGGDVESPAADATMP
                     AAETTTAPATADTTTTTDTAPAPADTAPADTAPADTAPAGEPAPASN"
     gene            2128..2463
                     /locus_tag="EYO87_14045"
     CDS             2128..2463
                     /locus_tag="EYO87_14045"
                     /inference="COORDINATES: protein motif:HMM:PF04993.11"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HIC67093.1"
                     /translation="MTRDPALEAQLLDDLGHPDGVTGHAMSGGYCHMINGHMLCAARQ
                     GRAMFRVGRTAEPAALSLPGTGRMVQRHREMPGYVWLSGPPLSDDTIRIRLARMALSH
                     VMTLPPKDI"
     gene            2464..2799
                     /locus_tag="EYO87_14050"
     CDS             2464..2799
                     /locus_tag="EYO87_14050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011746859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sarcosine oxidase subunit delta"
                     /protein_id="HIC67094.1"
                     /translation="MLILTCPYCGIPAEETELAPGGEAHLTRIGPNGADTEFEAYMFA
                     RKNPRGVHFERWRHAYGCGKWFLAARDTATLQVYGTYEAQNTRPPARIVKAIRAARPD
                     WQSDWTDAE"
     gene            2796..>3523
                     /locus_tag="EYO87_14055"
     CDS             2796..>3523
                     /locus_tag="EYO87_14055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HIC67095.1"
                     /translation="MTHTPPFRLPGGGRLIDRAYQVPFRFDDRQLRGLQGDTLASALL
                     ANGQMLMGRSFKYHRPRGPLASGAEEPNALFGLGEGGRFEPNQRATTTALLPGMTLRS
                     QNCWPSLDADIGAVNTWLAPLLPAGFYYKTFIHPRPFWKHVFEPIIRRSAGLGRAPTD
                     ADPDRYEQAYGHVDTVVVGGGIAGLRAALDAAQAGGSVVVLEQGAIWGGRTPVDHKGG
                     QKAVDMLLDRLRGMKNVTLRRNTMA"
BASE COUNT          630 a         1155 c         1125 g          613 t
ORIGIN      
        1 ctcggtgtgc aggcgctgcg catcctcggg ggcgatcacg ccgcgttcca gatcgcgatc
       61 cacctcgcga agctgatcgc gatagacgcg caggtcatag gtcgcggacg attctgcccg
      121 ggcaccgtcg cgggcgcgcc agatcggcaa gaagatcgca gccgcgacca gcaaggtcag
      181 tgcggcggag aatatccaga acatcgcgtg ccccccaaaa atcgcctttc ttcctaaagt
      241 tctttgcggc cgagcggaag tgtcgcaagg tcgcagtcat tcacgtccgc gccagagccc
      301 gcctgcccgc tgcgccaggc gaccgcatgt cgcatttggc gccgatctgc cgcatccact
      361 cttgaggccg gcgcggccag tcgccatgct gcgcgcaacg tctgtcaggg ggtgggcatg
      421 tctcaatcgc gccgctattc ggtctttgcc atcgcccgcg aggcgtttcg cgaacatcgc
      481 ggctggtcca gggcatgggc cagccccgag ccgcgccaaa gatacaaggt ggtgatcgtg
      541 ggcgcgggcg ggcacggatt ggccacggcc tattacctcg gccggaactt cggcatcacc
      601 gatatcgcga tcatcgaaaa gggctggctg ggcggtggca ataccggtcg caacacgacc
      661 atcatccgca gcaattatct gcaggatccc tcggctgcca tctatgacaa atcgttgaaa
      721 ctgtacgaga ccctttcgca ggatctgaac tacaacgtca tgttcagccc gcgcggcctg
      781 atcatgctgg cgcagaccga acacgaggtg cgcggctaca agcgcaccgt ccatgccaac
      841 aacctgcaag gcgtcagcac cgaatggatc gaacccgcac ggctgaagga actggtgccg
      901 atcatcaatc tggacgggcc gcgctatccg gttctgggcg gtctgtatca ggcgcgcggc
      961 ggcaccgcgc gccatgatgc ggtggcctgg ggctatgccc gggcctgttc ggacatgggg
     1021 atgcacgtca tccagaactg cgaggtcacg gggatcgaaa ccgatggcgg cgcggtgcag
     1081 gccgtcaata ccagcaaggg ccgcatcggt tgcgagaagc tggccctggt cgtggcgggt
     1141 cattccagcc agcttgccgg gatggccggt ttccgcctgc cgatcgaaag cgtcgccctg
     1201 caagccctgg tcagcgaacc gatcaagcct tgcatggatg tggtcgtcat ggccaacacc
     1261 gtgcacggct acatgtcgca atccgacaag ggcgagatgg tgatcggagg cggcaccgac
     1321 ggtttcaaca atttcacgca gcgcggctcc tggcatcacg tcgaggaaac cgtccgcgcc
     1381 ctggtcgaga catttccgat gatctcgcgt ctcaagatgt tgcggcaatg gggcggaatc
     1441 gttgacatga ccggcgaccg ctcgcccatc ctgtcgacga cgccggtgga cggaatcttc
     1501 gtcaattgcg gttggggcac cggtggtttc aaggcgattc ccggatccgg ctgggccatg
     1561 gccgaactgg tggcgcgggg ccgtcccggt ccgttggccg cggggttcgg gctgaaccgt
     1621 ttccgcgaag ggcgttttgt cgacgaatcg gtcgcggccg gcgtggccca ttagcatgaa
     1681 cccgcttatg ttgattttac ccggaaccag tcatgcgggc catgaattgc ctctccatac
     1741 ggttgaaatc cgaaaggaaa gatcatggct gaaggcaaca acaacaataa caacctctat
     1801 ttcattgtcg gcggcatcgt cgtcgtggtg gcactcctgt ttttcttcat gtccggaggc
     1861 gacgtggaaa gccctgcggc agacgcaacg atgcccgcgg cagagaccac cactgccccg
     1921 gccacggccg acacaaccac caccaccgac acggcacctg ctcccgcgga caccgctcct
     1981 gcggacaccg ctccggccga cacggcccct gccggggaac ctgcacccgc gtcgaactga
     2041 gccgaatccg gcgcggtccg tcgcgcgaaa caagatcggg tccgggggcg cgcagtcccc
     2101 ggcccctgca cgccgagaac cgccccgatg acgcgcgatc cggcgcttga agcgcagctt
     2161 ctggatgatc tgggccatcc tgacggggtg accggccacg cgatgtccgg cggttattgt
     2221 cacatgatca acggtcatat gctctgcgct gcacgtcagg ggcgcgcaat gtttcgggtg
     2281 ggcaggaccg ccgagcccgc agcattgtct ttgccgggaa ccgggcgaat ggtccagcgg
     2341 caccgtgaga tgccgggata tgtctggctg tccggcccgc cgctttccga cgacacgatt
     2401 cgcatccgcc tggcgcggat ggccctgtcc catgtcatga ccctgccgcc caaggacatc
     2461 tgaatgctga tcctgacttg cccctattgc ggaattcccg ccgaggaaac cgagcttgcc
     2521 cccggcggcg aggcacatct gacgcgcata ggccccaacg gtgccgatac cgaattcgag
     2581 gcctacatgt ttgccaggaa gaacccgaga ggcgtccatt tcgaacgctg gcggcacgcc
     2641 tatggctgcg gcaaatggtt tcttgcggcc cgcgatacag caaccttgca ggtctatggc
     2701 acatacgagg cgcagaacac ccgacccccg gcgcgtatcg tcaaggcgat tcgcgccgct
     2761 cgtcccgatt ggcaatctga ctggaccgac gccgaatgac gcacacgccc cccttccgtc
     2821 tgcccggcgg cggccgcctg atcgaccgcg cctatcaggt tccgttccgc ttcgacgatc
     2881 gccagttgcg cgggcttcag ggcgatacgc tggcctcggc gctgctggcc aatggccaga
     2941 tgctgatggg ccggtccttc aagtatcacc gcccccgcgg gccgctcgct tcgggcgccg
     3001 aggaacccaa cgccctgttc ggtctgggcg agggtggccg gttcgagccc aaccagcgcg
     3061 ccaccaccac cgcccttctg ccgggcatga cgctgcgcag ccagaattgc tggccatcgc
     3121 tggatgccga tatcggtgcg gtgaacacgt ggcttgcgcc gctgttgccg gccggcttct
     3181 actacaagac cttcatccat ccgcggccct tctggaaaca tgtgttcgaa cccatcatcc
     3241 gccgcagcgc cgggctgggt cgcgcgccga cggacgccga tcccgaccgc tacgaacagg
     3301 cctacggaca tgtcgatacg gtcgttgtcg gcggcggcat cgccggtctg cgggcggcgc
     3361 tggacgccgc gcaggcgggt ggcagcgttg tggttctgga acagggcgca atctggggcg
     3421 gtcggacgcc cgtcgatcac aagggcgggc agaaggcggt ggacatgctg ctggaccggt
     3481 tgcgggggat gaagaacgtc accctgcgcc gcaatacgat ggc
//
LOCUS       DTVW01001066            1214 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2308731, whole
            genome shotgun sequence.
ACCESSION   DTVW01001066 DTVW01000000
VERSION     DTVW01001066.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1214)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1214)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1214
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2308731"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(67..>1214)
                     /locus_tag="EYO87_14060"
     CDS             complement(67..>1214)
                     /locus_tag="EYO87_14060"
                     /EC_number="2.7.7.13"
                     /EC_number="5.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012187425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="mannose-1-phosphate
                     guanylyltransferase/mannose-6-phosphate isomerase"
                     /protein_id="HIC67096.1"
                     /translation="ALMVADDDPERLLLVAPSDHVIPDPKAFAAAVSEGAQAAKQGRI
                     VTFGITPDRPETGYGYLELADGGEGPQPLARFVEKPDAERAAQMLAQGNYLWNAGIFL
                     FSARAMIEAFHAHAPDYQTPVRAALDGARRDLGFLRLARAPWESLPDNSIDYAVMEKA
                     DNLTVVRFSGRWSDLGGWDAVWREQLERMPAGDGVVADANSTAIDCRDVLLRSDHADL
                     QLVGIGLQDVMVVATGDAVLVADKSRAQDVRQAVTALKKKGRKQAEAFPRDHRPWGWF
                     ETLALADRFQVKRIVVKPGAALSLQSHVHRSEHWIVVSGTARVTVDDHVTLVTENQSI
                     YIPLGARHRMENPGKVPMVLIEVQTGSYLGEDDIIRYEDVYARDSGD"
BASE COUNT          207 a          432 c          378 g          197 t
ORIGIN      
        1 cccggggcgc cagccgcagc agcgcgcggc cgaccatgcc gctgccgccg gtcagcagaa
       61 cgcgcatcaa tcgccgctgt cgcgggcata gacatcctcg tagcggatga tgtcatcctc
      121 gcccaggtag gatccggtct gcacctcgat cagcaccatc ggcaccttgc ccggattttc
      181 catccggtgg cgcgcgccca gcgggatata gatggactgg ttttcggtca ccagcgtgac
      241 gtgatcgtca accgtgaccc tggccgtgcc gctgaccacg atccagtgtt cggagcgatg
      301 gacgtggctt tgcagcgaca gcgccgcgcc cggcttgacc acgatccgct tgacctgaaa
      361 gcggtcggcc agcgccagcg tctcgaacca gccccagggg cggtgatcgc gcgggaacgc
      421 ctcggcctgc ttgcggcctt tcttcttcag cgcggtaacg gcctgccgca catcctgcgc
      481 gcgcgatttg tccgcaacca ggaccgcgtc cccggtggcc acgaccatca cgtcctgcaa
      541 tccgataccc accaattgca gatccgcatg gtccgatcgc agcagcacgt cgcggcaatc
      601 gatggcggtg gaattggcat cggcgacgac cccgtcgccg gcaggcatcc gttccagctg
      661 ctcgcgccag accgcgtccc agccgcccag atcggaccag cggcccgaaa aacgcaccac
      721 ggtcagattg tcggcctttt ccatcaccgc gtaatcgatg gaattgtccg gcagactttc
      781 ccagggcgct cgcgccagcc gcaggaaacc cagatcgcgg cgggcgccgt ccagcgcagc
      841 ccgcaccggc gtctgatagt cgggggcatg ggcgtgaaat gcctcgatca tggcgcgggc
      901 gctgaacagg aagatccccg cattccacag gtaatttccc tgcgccagca tctgcgccgc
      961 gcgttccgcg tcaggctttt caacgaaacg cgccagaggc tggggaccct cgccaccgtc
     1021 ggccagttcc agatagccat agcctgtttc ggggcggtcc ggggtgatgc cgaaggtgac
     1081 gatgcgcccc tgcttcgcgg cctgcgcgcc ttcggacacg gccgccgcaa aggccttcgg
     1141 atccggaatg acatgatccg agggcgccac cagcagcagc cgctcgggat cgtcgtcggc
     1201 gaccatcagc gccg
//
LOCUS       DTVW01001067            3854 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2309938, whole
            genome shotgun sequence.
ACCESSION   DTVW01001067 DTVW01000000
VERSION     DTVW01001067.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3854)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3854)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3854
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2309938"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..598
                     /locus_tag="EYO87_14065"
     CDS             <1..598
                     /locus_tag="EYO87_14065"
                     /EC_number="2.2.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005607809.1"
                     /note="catalyzes the formation of 1-deoxy-D-xylulose
                     5-phosphate from pyruvate and D-glyceraldehyde
                     3-phosphate; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase"
                     /protein_id="HIC67097.1"
                     /translation="LANLPGMVVMAAADEAELVHMVATAAAHDSGPIALRFPRGEGTG
                     VDLPARGKILPIGKGRIIAEGKGVAILSFGTRLSQAMEARESLTSRGITPTVADARFA
                     KPLDRDLILSLARNHEALITLEEGAIGGFASHVAQLLAEEGVFDSGLKFRSMVLPDRF
                     VDHDAPRAMYDSSALNAPHIEAKVLEVLGISRLADRRA"
     gene            complement(614..1309)
                     /gene="fliP"
                     /locus_tag="EYO87_14070"
     CDS             complement(614..1309)
                     /gene="fliP"
                     /locus_tag="EYO87_14070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999310.1"
                     /note="The bacterial flagellar biogenesis protein FliP
                     forms a type III secretion system (T3SS)-type pore
                     required for flagellar assembly; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar type III secretion system pore protein
                     FliP"
                     /protein_id="HIC67098.1"
                     /translation="MATIAALLPVAALAQDAPGLDQLAGGLGQNAVLVVVALTALSLA
                     PAIAIMVTAFPFIVTVLSILRQAIGLQQSPPNMLIVSLAIFLTWFIMDPVLREAWQVA
                     GAPLQDGSIGIAEAIQRGVVPFQGFMSARTDPDTLRGLAEIAPAGGDPAERLSVLIPA
                     FMLSEIQRAFEIGFLIALPFLIIDLVVSAVLMAMGMMMVPPVVVSLPFKLAFFVVVDG
                     WTMIAGALVRSYQ"
     gene            complement(1345..1602)
                     /locus_tag="EYO87_14075"
     CDS             complement(1345..1602)
                     /locus_tag="EYO87_14075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FliM/FliN family flagellar motor switch protein"
                     /protein_id="HIC67099.1"
                     /translation="MDALKHLIDTDNIALEVTIRLGKTRLTVAQLSALQPQDVLTLDQ
                     TVEDGVEICVGDKVIARGELTGDGTPEDRLCVRILGAAEAE"
     gene            complement(1590..2165)
                     /locus_tag="EYO87_14080"
     CDS             complement(1590..2165)
                     /locus_tag="EYO87_14080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67100.1"
                     /translation="MSIAMFKLESFTSAMAEQGARVTYDRASLDQAFADGVTEGLARA
                     QREDMNSLSAGLERLAKALGDDEDRRAALRQEALSSLAPVLEQILDCLVPASESPRLE
                     AALTEQLMRLSREGSALRASISCSPAMRGMVEHCLAEAGLDEIELVASDSDRISLSLS
                     GGRIDFSADRMANEIRELIAEIKGEDAAWTH"
     gene            complement(2162..3739)
                     /gene="fliF"
                     /locus_tag="EYO87_14085"
     CDS             complement(2162..3739)
                     /gene="fliF"
                     /locus_tag="EYO87_14085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar M-ring protein FliF"
                     /protein_id="HIC67101.1"
                     /translation="MQKLQDYWNERSSQQKIILAAAFLATFLVIAGFGWMASRPGMSM
                     IYGGLDSAQAGEVVAGIERAGVTYEVRGDSIWVDTSARDRLRMELAAQGLPAQGTAGY
                     ELLDGMSGFGTTSQMFDAAYWRAKEGELARTILALPNVKTARVHLAVETGRGYRRDAT
                     GSASVTLSTNGQAITREQAAALKFLISSAVPEMKPDSVTVIDAKRGIVVAGEDEPGAD
                     RAAEMKRNVERILEPRVGIGNAIVELNLDLISESEVMTEQRFDPEQRALISQVTEETS
                     DQSNSTGSGAVTAASNLPDGQNGQGDSEQSQRSENRQQANYEVSRVTREVSRRPGDTR
                     RMTIAVLVNGVPETDADGQTRLVSRPDAELDTLRQLVASASGYDESRGDQITVKSLPF
                     ATIGSEGTLAKPDFLDRLELNGLARIALIGLFALAVIFAVLRPVLRSRAGPAAQEPGL
                     DDSLPLSGGLNGVIEPEDEPLVSEPQLMPELPPRAEPLALPSADPVARLRGMMRERHD
                     ESVKILSGWIDNKEKAH"
BASE COUNT          671 a         1271 c         1218 g          694 t
ORIGIN      
        1 cctcgcgaac ctgcccggca tggtggtcat ggccgccgct gacgaggcgg aactggttca
       61 tatggtcgcc accgcggccg cccatgacag cggcccgatt gcccttcgct ttccgcgcgg
      121 cgagggcacc ggcgtcgatc tgccggctcg gggtaagatt ctacccatcg gcaagggccg
      181 gatcatcgcc gagggcaagg gcgtcgcgat cctgtccttc ggcacgcgcc tttcacaggc
      241 gatggaggca cgcgaatccc tgacctcgcg gggtatcacg ccaaccgtcg cggatgcccg
      301 cttcgccaag ccgctggacc gggatctgat cctgtcgctg gcccggaacc acgaggcttt
      361 gatcacgctg gaagaaggcg cgatcggcgg gttcgccagc cacgtggcgc agttgctggc
      421 cgaggaaggc gtatttgaca gcgggctgaa gttccgctcg atggttctgc cggaccggtt
      481 cgtcgatcac gacgcgccca gggcgatgta tgacagttct gccctgaacg cgccccatat
      541 cgaggcgaag gttctggaag tgctgggcat cagccggctg gccgatcgcc gcgcctgatc
      601 cggcgcgaca ccctcactga tagctgcgca ccagcgcccc ggcgatcatc gtccagccgt
      661 ccacgacgac gaagaaggcc agcttgaaag gcagcgagac cacgaccggc ggcaccatca
      721 tcatccccat cgccatcagt actgccgaaa cgaccaggtc gatgatcagg aagggcagcg
      781 cgatcaggaa gccgatctcg aaagcgcgct gaatctcgga cagcatgaag gccgggatca
      841 ggacagacag acgttcggcc ggatcgccgc cggccggggc tatctcggcc agtccgcgca
      901 gcgtgtcggg atccgtgcgc gcggacatga aaccctggaa gggaacgacg ccgcgctgga
      961 tcgcctcggc gatgccgatg ctgccgtcct gcaacggtgc acccgccacc tgccaggcct
     1021 cgcgcaggac cggatccatg atgaaccagg tcagaaagat cgcgagactg acgatcagca
     1081 tgttgggggg cgattgctgc aagccgatcg cctggcgcag gatcgacaga accgtgacga
     1141 tgaacgggaa ggcggtcacc atgatggcga tggccggcgc cagcgacagc gccgtcaatg
     1201 cgaccaccac cagcactgcg ttctggccaa gcccgcccgc cagctgatcc agtcccggcg
     1261 catcctgtgc gagggctgcg accggcagca atgccgcgat cgtcgccatc gcgacaaggc
     1321 tggcgcggtg gcggatcatg cccgtcactc ggcttcggcc gcgccaagga tgcggacgca
     1381 cagccggtcc tccggggttc cgtccccggt caactcgccg cgggcgatga ccttgtcgcc
     1441 gacgcagatc tcgacgccat cctcgaccgt ctgatccagc gtcagcacat cctggggctg
     1501 caaggctgaa agctgcgcga cggtcagtcg ggtttttccc agcctgatcg tgacttcaag
     1561 cgcgatgttg tccgtgtcga tcagatgttt cagtgcgtcc atgccgcgtc ctcccccttg
     1621 atttcggcga tcagttcacg aatttcgttg gccatgcggt cggctgaaaa gtcgatcctg
     1681 ccgccgctga gcgacaggct gatgcggtcg ctgtccgatg cgaccagttc gatctcgtca
     1741 agaccggcct cggcaaggca atgttcgacc attccgcgca tcgcggggct gcacgatatg
     1801 ctggcacgca gcgccgaccc ctcgcgcgac aggcgcatca attgctcggt cagcgccgcc
     1861 tcgagccggg gcgattccga agccgggacc aggcagtcca ggatctgttc aaggaccggc
     1921 gccagcgaag agagcgcctc ttgccgcaga gccgcgcgcc gatcttcatc gtcgccaagc
     1981 gccttcgcca agcgttcgag cccggccgag agactgttca tgtcttcgcg ctgcgcgcgg
     2041 gccagtcctt cggtgacacc gtcggcgaag gcctgatcca gactggccct gtcataggtg
     2101 acgcgggcgc cctgttcggc catggccgat gtgaaggatt ccagtttgaa catggcgatg
     2161 ctcaatgggc tttctccttg ttgtcgatcc aaccagacag gatcttgaca ctttcatcgt
     2221 ggcgttcgcg catcatgccg cgcaggcgtg caacaggatc ggccgaaggc agggccaggg
     2281 gctcggcccg cggcggcaat tccggcatca gctgcggctc gctgaccaag ggttcgtctt
     2341 cgggttcgat cacgccgttc agcccgcccg acagcggcaa gctgtcgtca agcccaggct
     2401 cttgcgcggc cggaccggcg cgcgagcgca gcaccggccg cagcaccgcg aaaatcaccg
     2461 ccagcgcgaa aagcccgatc agcgcgatcc gtgccaggcc gttcagttcc agccgatcca
     2521 gaaaatccgg cttggccagc gtgccttcgg acccgatcgt ggcgaagggc agcgatttga
     2581 cggtgatctg gtcaccacgg ctttcgtcat agcccgatgc cgaggcgaca agctggcgca
     2641 gggtgtccag ttcggcatcg ggccgcgaca ccagacgagt ctggccatcg gcgtccgttt
     2701 ccggcacgcc gttgaccagc acagcgatgg tcatgcgccg cgtgtcgccg ggtctgcgcg
     2761 agacttcacg cgtgacgcgg ctgacctcgt aattggcctg ctggcggttt tccgaacgct
     2821 gcgattgctc actgtcgccc tggccattct gaccgtccgg caggttcgag gcggccgtca
     2881 cggctcccga cccggtggag ttgctttgat ccgatgtctc ttcggtgacc tgagagataa
     2941 gcgcccgctg ttcgggatcg aatcgctgct cggtcatcac ctcggattcg ctgatcagat
     3001 ccagattcag ctcgacgatg gcgttgccga tgccgacgcg cggttccagg atgcgctcga
     3061 cattgcgctt catctcggcg gcccggtctg cgccgggctc atcttctccg gcgacgacga
     3121 tgccgcgctt ggcgtcgatg acggtgaccg aatccggctt catctcgggc acggccgaag
     3181 aaatcaggaa tttcagcgcc gccgcctgtt cgcgtgtgat ggcctggccg ttggttgaca
     3241 acgtgaccga agcgctgccg gtcgcgtcgc ggcgatagcc ccgcccggtt tcgaccgcca
     3301 ggtgcacccg cgctgtcttg acgttcggca aggcaagaat cgtgcgtgcc agttcacctt
     3361 ccttggcccg ccaataggcg gcatcgaaca tctgcgacgt ggttccgaat ccggacatgc
     3421 cgtccagcag ttcatatccg gccgtgccct gcgcgggcag gccctgggcg gccagttcca
     3481 tccgcaggcg gtcgcgggcc gatgtgtcga cccagatcga atcgccgcgc acctcatagg
     3541 tgacgcctgc gcgttcgata cccgccacga cttcgccggc ctgtgccgaa tcgaggccgc
     3601 catagatcat tgacatgccc ggacggcttg ccatccagcc gaaacccgcg atgaccagaa
     3661 acgtcgcaag aaacgccgcc gcgagaatga ttttctgttg tgagcttcgc tcgttccaat
     3721 agtcctgcag tttttgcaaa accggccctt tcgaatcagc gtcccgtttt tcgtcaacgc
     3781 cttgatgaca tggcggctat taagaattgg ttagtcgcga ggtgctaatt ccgtcttgtc
     3841 acgacggaga atca
//
LOCUS       DTVW01001068            1446 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2312089, whole
            genome shotgun sequence.
ACCESSION   DTVW01001068 DTVW01000000
VERSION     DTVW01001068.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1446)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1446)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1446
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2312089"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..434)
                     /locus_tag="EYO87_14090"
     CDS             complement(<1..434)
                     /locus_tag="EYO87_14090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015667763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HIC67102.1"
                     /translation="MIFYILRRILAAIPVMGFVALFVFLLLRLTPGDPAAIIAGDTAT
                     PAQLEAIRESLGLNEPVLVQFFAWIGQLLRGDFGTSILSGKPVIQLIADRMEPTISLA
                     LTTIILSVIIAVPLGVIAAWKQGTLIDRFVMLLSVLGFSVPV"
     gene            complement(492..>1446)
                     /locus_tag="EYO87_14095"
     CDS             complement(492..>1446)
                     /locus_tag="EYO87_14095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012045207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HIC67103.1"
                     /translation="VPRDEPPSAAAGGKVVKVDRVEWVVMADDQTALNALQAGEIDFW
                     EQPPSDLLPILEANPDLTVKNLNALGFQTIMRPNTLNPPMDDPRIRRAAIAAVNQKDV
                     LDALVGTPDLYKICGAMFVCDTPLATDVGSETLVQGNGMDKAKALLKEAGYDGTPIVI
                     MQPTDVASLRSQPIVVAQAMRDAGFTVDLQAMDWQTLVGKRASQAPISEGGWHMFMTN
                     WVGADVFNPLVNNMVNGKGKDGGWFGWPDVPKLEELRTAYATAPTLEEQQKLAAEIQK
                     IAYDEGIYAPIGQYFVPTAWSNSLDGVLDAPAPLFWNITKN"
BASE COUNT          263 a          470 c          455 g          258 t
ORIGIN      
        1 aagaccggaa ccgagaaacc cagcaccgac agcagcatca cgaagcggtc gatcagcgtg
       61 ccctgtttcc atgcggcaat gacgcccagc gggacggcaa tgatcacaga caggatgatc
      121 gtggtcaacg ccaggctgat ggtcggttcc atccggtccg caatcagctg gatcaccggc
      181 ttgcccgaca ggatcgaggt gccgaaatcg ccccgcagaa gctgcccgat ccaggcgaag
      241 aactgcacca gaacaggctc gttcaatccc agcgattcgc ggatcgcctc cagctgcgcg
      301 ggggtggcgg tgtctccggc gatgatcgcc gcaggatcgc ccggcgtcag gcgcagcagc
      361 aaaaacacga acagcgcgac gaatcccatc accgggattg cggccagaat acgccggaga
      421 atgtagaaga tcatggcggc ggtgcctttc gaacggaagc gcggccccgc cagcgggggc
      481 cgcgcgcggc gtcagttctt ggtaatattc cagaacagcg gcgcgggcgc gtccaggacg
      541 ccgtcgaggc tgttggacca ggccgtaggc acgaaatact ggccgatcgg ggcgtagatg
      601 ccttcgtcat aggcgatttt ctggatctcc gcggccagct tctgctgttc ctccagcgtg
      661 ggtgcggtcg cataggctgt acgcaactct tcaagcttgg gcacgtccgg ccagccgaac
      721 cagccgccgt ccttgccctt gccattgacc atgttgttga ccagcggatt gaacacgtcg
      781 gcgcccaccc agttggtcat gaacatgtgc cacccgcctt cagagatggg cgcctggctt
      841 gcgcgcttgc ccaccagggt ctgccagtcc atcgcctgca gatcgacggt gaatcccgca
      901 tcccgcatcg cctgtgcgac gacgatgggc tgcgagcgta gcgatgcgac gtccgtcggc
      961 tgcatgatga caattggcgt gccgtcatat ccggcctctt tcagcagcgc cttggccttg
     1021 tccatgccat tgccctgcac aagcgtttcg gaccccacgt cggtggccag cggcgtgtcg
     1081 cagacgaaca tggcaccgca gatcttgtag aggtcaggcg tcccgaccag cgcatccagg
     1141 acgtctttct ggttcaccgc cgcaatggcg gcccggcgga tccgaggatc gtccatcggc
     1201 ggattcagcg tgttgggccg catgatcgtc tggaatccca gcgcattgag gttcttgacc
     1261 gtcagatccg gattggcctc aaggatcggc aacaggtcgg aggggggctg ttcccagaag
     1321 tcgatctcgc ccgcctgcag cgcgttgagc gccgtctggt cgtcggccat caccacccat
     1381 tcgacgcggt ccaccttgac caccttgccc cccgcggcgg cgcttggcgg ctcgtcgcgc
     1441 gggacg
//
LOCUS       DTVW01001069            1811 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2313043, whole
            genome shotgun sequence.
ACCESSION   DTVW01001069 DTVW01000000
VERSION     DTVW01001069.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1811)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1811)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1811
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2313043"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..859)
                     /locus_tag="EYO87_14100"
     CDS             complement(<1..859)
                     /locus_tag="EYO87_14100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019954359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HIC67104.1"
                     /translation="MAAGILAIRHQSGGAAVAAGLGTLILGTLAAVAWQARGLSGLGP
                     WDWRAVWFTIWQAAVSAGLSAALAIPVARALARRRFPGRSVLVTLLGAPFILPVIVAI
                     MGLIAVFGRNGAINEGLRAAGLPEFSVYGWQGVILAHVFFNLPLSVRLILQGWQAIPA
                     ERFRLAESLGFAPADMARHLERPMLRGVLPGVWLAVFLVCLTSFTVALALGGGPSATT
                     VELAIYQAFRFDFDLGRAATLGLIQIGLSIAAMTLARWIAIPAAFGTGLDEAQGPRGP
                     AGWRLGADAL"
     gene            complement(835..1803)
                     /locus_tag="EYO87_14105"
     CDS             complement(835..1803)
                     /locus_tag="EYO87_14105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013068406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine ABC transporter substrate binding
                     subunit"
                     /protein_id="HIC67105.1"
                     /translation="MILALLAATPAAAQDKPVLTVYAGDYIASEWGPGPRIEEGFEAF
                     CDCDLRFVTGDILPRILMEGENTQADIVFGLNTDVTARARASGLFAPHGQDTSAMSMP
                     VEWTDDIFLPYNWGETAFVYDETRLDNPPASFEDLLNAPDDLKIVIQDPRSSISGLAL
                     LLWVKAVYGDEAPEAWARLAPKVLTVTKGWSESYGMFTEGEADMVLSYTTSPAYHIEA
                     EDDTTKRAAIFPEGHYFMAELAAQLKGTDQPELAQKFMDWILTPDFQKSIPLANWSLP
                     AKLPEAEWPRVMRELPRPEKTLFYSEDEAEALRKPALDEWLRAFSQ"
BASE COUNT          332 a          621 c          581 g          277 t
ORIGIN      
        1 acagcgcgtc cgcgcccagt cgccagcccg ccggtccgcg cggaccctgt gcctcgtcca
       61 gccccgttcc gaaggcagcg gggatggcga tccagcgggc cagcgtcatc gccgcgatcg
      121 acaacccgat ctggatcaga cccagcgtcg ccgcccgccc cagatcgaaa tcaaagcgga
      181 aggcctgata gatcgccagt tccacggtcg tggccgaagg cccgccgcca agcgccagcg
      241 cgacggtgaa gctggtcagg cagaccagga acaccgccag ccagacgccc ggcaacacgc
      301 cgcgcagcat cggccgttcc agatgccgcg ccatgtcggc gggcgcgaag cccaggcttt
      361 cggccagacg aaatcgttcc gccggaatgg cctgccagcc ctgcaggatc aggcgcaccg
      421 acagcggcag gttgaagaag acatgggcca ggatgacgcc ctgccagcca tagacactga
      481 attccggcag gcctgccgcg cgcaggccct cgttgatggc gccgttgcgg ccgaagaccg
      541 cgatcagtcc catgatcgcg acgatcacgg gcaggatgaa gggcgcgccc agcagcgtga
      601 ccagaaccga tcgtcccgga aagcgccgtc tggccagcgc gcgggccacc ggaatggcca
      661 gcgccgccga caggcccgcc gataccgcgg cctgccagat cgtgaaccag accgcccgcc
      721 aatcccaggg gcccagcccg gacagcccac gtgcctgcca cgcgaccgcc gcaagggtgc
      781 ccaggatcag cgtccccagg ccggccgcga cggccgcgcc gccggactgg tgtcttattg
      841 cgagaatgcc cgcagccatt catccagcgc cggtttgcga agcgcctcgg cctcgtcttc
      901 ggaatagaac agggtctttt ccgggcgcgg cagctctcgc atgaccctgg gccattcggc
      961 ctcgggcagt ttcgcgggca gcgaccagtt cgccagcggg atcgacttct gaaaatccgg
     1021 ggtcaggatc cagtccatga atttctgtgc cagttccggc tggtcggtgc ctttcagctg
     1081 cgcggccagt tcggccatga aataatgacc ttcgggaaag atcgcggcgc gcttggtcgt
     1141 atcgtcttcg gcctcgatgt gataggcggg cgaggtggtg taggacagca ccatatcggc
     1201 ctcaccctcg gtgaacatgc catagctttc cgaccagccc ttggtcaccg tcagcacctt
     1261 gggcgccagc cgggcccatg cctcgggcgc ctcatcgcca taaaccgcct tgacccaaag
     1321 cagcagcgcg aggccggaaa tggaagagcg cggatcctgg atcacgatct tcagatcgtc
     1381 gggcgcgttc agcaggtctt cgaaactggc cggcggattg tccagccgcg tctcgtcata
     1441 gacaaaggcc gtctcgcccc agttataggg caggaagatg tcatcggtcc attccaccgg
     1501 catcgacatg gccgaggtat cctgcccatg cggcgcgaac aatcccgagg cgcgcgcccg
     1561 cgccgtgaca tcggtattca gtccgaagac gatgtcggcc tgggtgtttt cgccctccat
     1621 cagaatacgg ggcaggatgt cgccggtcac gaaacgaagg tcgcagtcgc agaacgcctc
     1681 gaacccttct tcgatcctgg ggccggggcc ccattcgctg gcgatgtaat cgccggcata
     1741 gacggtcagc acgggcttgt cctgcgcggc ggcgggggtc gcggccagca gggcgaggat
     1801 cagggtcttc t
//
LOCUS       DTVW01001070            1632 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2313982, whole
            genome shotgun sequence.
ACCESSION   DTVW01001070 DTVW01000000
VERSION     DTVW01001070.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1632)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1632)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1632
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2313982"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(92..991)
                     /locus_tag="EYO87_14110"
                     /pseudo
     CDS             complement(92..991)
                     /locus_tag="EYO87_14110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611638.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS21 family transposase"
     gene            complement(1105..1632)
                     /locus_tag="EYO87_14115"
                     /pseudo
     CDS             complement(1105..1632)
                     /locus_tag="EYO87_14115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611977.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="IS5 family transposase"
BASE COUNT          266 a          529 c          501 g          336 t
ORIGIN      
        1 ctgcacctcc agcggtttga tcctactgca gcgtcttcgc agcgcgaaaa agccagccgg
       61 gacgttgtcg ttgtaggtta cggaagcgcg ggcgctcggc ttcgaagacc tcccaggtgg
      121 tcttgtcccg gaactcggta tggggattgg cctttgccca ggcgatgcag cggtcctgaa
      181 gccaggcgtt gagttcggca tagctcctga acttcggcct gggcacgaag aaccgccgcc
      241 ggatcacccc gacctggttc tcgacctgcc ccttctccca gccggaggcc ggggtgcagg
      301 cgaccggttc gaagaggtaa tgcccgctca tctgctggaa ccggcgattg taggcccggt
      361 tcttgccgac gaagatcgtg tccaccgcgg tcttcatatt gtcgtagatg ccccgcgcgc
      421 aggtgccacc gaagaaggcg aacgccttgt cgtgggcgtc gaacaccatc tcctgggtct
      481 cgcggggata ggcccggacg aagaccatcc tgctgtggca cagccggacg tgggctacct
      541 tgatcgtggt ggtcaccccg tcgatgatcg cgacctcgtg gctccagtcg aactggaagg
      601 cttcgccggg atcgaagctc agcggcacgt aggctgcggc ggaggcttcg gcttccgatt
      661 gcgaccagct cgcagcgtag cgccggaccg catcgtagcc gccttcgtaa cccagggccc
      721 ggagctcctc gaagatccgg atgcgggtca gacgctcacg cttcggacgg cgggcattct
      781 cggtgagcag gcggtcgagt tcatcccgcc acggcccgat cttcggctgg ggctgcacgg
      841 tgcgctcgta gctgaactcg gtggccccgg agcggatcac cttccggacc gtcttccgcg
      901 acacgcccaa ctcgcggcag atctccttga tcggcttgcc gtcctgaaaa tgccaacgcc
      961 ggatcttcgc gattgtctcc acaaccaaca tcccaaaagc cgcttccgat ttgcctcgga
     1021 agcatgatgg accaccgcat caggggggtc ccttttggat gccgatcacc ccaatacggg
     1081 gtcctttttg catgccggtt cacactttat ccccttgtct tttaacgctt ctctgaacca
     1141 atcggcatca tagcctctgt cggccagcag ccaccctgcc ttcggcaggc tgtccagcaa
     1201 agcggccgcg ccggtataat cgctgacctg gcctgcggac atgaagaatc caatcgggcg
     1261 tccgtttgca tcggcgacgg cgtgcagctt ggtgttcatg ccacctttgg tgcgcccgat
     1321 ctggcgcccg cgcccccctt tttcaccccg aggctcgacg ccgtgcggtg tgccttgagg
     1381 taggtcgcgt cgatcatgat tgtcttgtgc tcggcactct cggcggccag gccgaccatg
     1441 atccgggcga agaccccgtt gtcgctccag cgcttccatc ggttgtaaag cgtcttggcg
     1501 gggccgtatt ccttcggcgc gtcgcaccat cgcaagccat tgcgattgat gaagattatg
     1561 ccgctgagga cgcgacggtc atcgacgcgg ggcttgccgt ggctcttggg aaagaatggc
     1621 ttcaggcgct cc
//
LOCUS       DTVW01001071            2508 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2314856, whole
            genome shotgun sequence.
ACCESSION   DTVW01001071 DTVW01000000
VERSION     DTVW01001071.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2508)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2508)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2508
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2314856"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            146..871
                     /gene="phbB"
                     /locus_tag="EYO87_14120"
     CDS             146..871
                     /gene="phbB"
                     /locus_tag="EYO87_14120"
                     /EC_number="1.1.1.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_353825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetoacetyl-CoA reductase"
                     /protein_id="HIC67106.1"
                     /translation="MSKVAVVTGGSRGIGAAISKALKEAGYQVAAIYAGNDEAAKAFT
                     DETGIKTYKWSVADYDACVAGLKQIEDEMGPIAVLVNNAGITRDAMFHKMTPQQWREV
                     IDTNLTGLFNMTHPAWGGMRDRKFGRVINISSINGQKGQAGQANYSASKAGDLGFTKA
                     LAQEGARAGITVNAICPGYIGTEMVRAIDEKVLNERIIPQIPVGRLGEPEEIARCVVF
                     LASDDAGFITGSTISANGGQFFV"
     gene            complement(952..1116)
                     /locus_tag="EYO87_14125"
     CDS             complement(952..1116)
                     /locus_tag="EYO87_14125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010398248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF465 domain-containing protein"
                     /protein_id="HIC67107.1"
                     /translation="MSVTSHVEELRRKHQNLSDAVERAQKSPGSSDLEITAMKREKLR
                     IKEEITRLSH"
     gene            complement(1178..1936)
                     /locus_tag="EYO87_14130"
     CDS             complement(1178..1936)
                     /locus_tag="EYO87_14130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HIC67108.1"
                     /translation="MSDTREDGFLDGRLRLAQPVRGYRSGADAVMLAAACPAEAGQSV
                     LELGCGAGIASLCLGWRVPNLALTGLERQGVYAELARQNAARNGIAMRVVVGDLMRMP
                     SGLRTESFDHVIANPPYFLGGTAAAEPGRAEARHEDAPLRAWIDAGLRRLRPGGRITL
                     IQRSDRLAGLVAALDQRAGGLTILPIAARRGREAGRVLVVARKGARAPLRLLAPFVMH
                     QSDRHSADREDLTPAAQAVLREGAPIAELFAKVP"
     gene            complement(1929..2138)
                     /locus_tag="EYO87_14135"
     CDS             complement(1929..2138)
                     /locus_tag="EYO87_14135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013068880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2007 domain-containing protein"
                     /protein_id="HIC67109.1"
                     /translation="MKELFRSTDPVRISHAVALLEAEDIPTFELDQHMSVLEGSIGVL
                     PRRLMVADRDEFMARAIMRNAGLDE"
     gene            2214..>2508
                     /locus_tag="EYO87_14140"
     CDS             2214..>2508
                     /locus_tag="EYO87_14140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_353828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HIC67110.1"
                     /translation="MGVNENVQKPLDRLAEALASEMEAVNALIRQRMASRHAPRIPEV
                     TAHLIEAGGKRLRPMLTLAAAKLAGYDGPYHVHLAATVEFIHTATLLHDDVVDE"
BASE COUNT          482 a          803 c          803 g          420 t
ORIGIN      
        1 ctggcgacgc tgtgcatcgg cggcggcatg ggcgtcgcca tgtgcctgga gcgctgatcg
       61 cgacaccggc gcgcaatgat gttgcgcgcc ggcatctgtt tggatagcaa gatttcaacg
      121 acacgataat tcaggagggg tattcatgtc gaaagtcgcc gtagtcacag ggggatcgcg
      181 cggtatcggc gcggccatct cgaaggcgct gaaagaggca ggctatcagg tagcggccat
      241 ttacgccggc aatgacgagg ccgcgaaggc ctttaccgat gaaaccggga tcaagaccta
      301 caagtggtcg gtcgccgatt acgatgcctg tgtcgccggc ctgaagcaga tcgaggacga
      361 gatgggtccg atcgcggtgc tggtcaacaa tgcgggaatc acgcgcgacg cgatgttcca
      421 caagatgacg ccgcagcaat ggcgcgaagt gatcgacacc aacctgaccg gcctgttcaa
      481 catgacccac cccgcctggg gcggaatgcg cgatcgcaaa ttcggcaggg tcatcaatat
      541 cagctcgatc aacggccaga agggtcaggc aggccaggcg aactactccg catccaaggc
      601 cggggatctg ggctttacca aggcgctggc acaggagggc gcgcgggcgg gcatcaccgt
      661 caacgcgatc tgccccggct atatcgggac cgaaatggtc cgcgccatcg atgaaaaggt
      721 gctgaacgaa cgcatcattc cgcagatccc cgtgggccgc ctgggcgagc ccgaggaaat
      781 cgcgcgctgc gtggtgtttc tggcctcgga tgacgcgggc ttcatcaccg gctcgaccat
      841 cagcgccaat ggcgggcaat tcttcgtctg acgtcccaac caggcgacaa catgacacgg
      901 cccgcaccga tggtgcgggc cgctttcaga aacatgaaac cgttcaacag gttagtggga
      961 cagccgggta atttcttcct tgatgcgaag cttctcgcgc ttcatcgcgg taatttcgag
     1021 atcgctggac ccaggacttt tctgtgccct ctcaacggca tccgaaaggt tctggtgctt
     1081 tctgcgaagt tcctcgacat gggaagtaac cgacattgcg tcctcctcta aaggttgtgt
     1141 cgaacaggga cgattgcagc acagcttttc gattctgtca cgggactttc gcaaacagtt
     1201 ccgcaatcgg cgcgccttcg cgaagaaccg cctgcgcggc cggggtcagg tcttcgcgat
     1261 cggccgagtg gcggtctgac tgatgcatca cgaagggcgc aagcaagcgc agcggcgcgc
     1321 gcgcgccctt gcgggcgacg acaaggacgc gcccggcctc gcgaccccgc cgggcggcga
     1381 tgggcaggat cgtcagcccg cccgcgcgct gatccagcgc ggcaaccagc cccgccaacc
     1441 ggtcggatcg ctggatcagc gtgatccgcc cgcccggccg caatcgacgc aggccagcgt
     1501 cgatccatgc ccgcagcggc gcatcctcgt ggcgcgcttc ggcccgaccg ggttccgcgg
     1561 cggctgtgcc acccaggaaa taggggggat tcgcgatgac gtgatcgaag ctttcggtac
     1621 gcagtcccga cggcatccgc atcagatcgc ccaccacgac ccgcatcgcg atgccgttcc
     1681 gcgcggcgtt ttgccgcgcc agttcggcgt aaaccccttg ccgttccagc ccggtcagcg
     1741 ccaggttcgg cacccgccag cccaggcaca ggctggcgat tcccgccccg cagcccagct
     1801 ccagcaccga ttgccccgcc tcggccgggc aggccgccgc cagcatcacc gcatcggcgc
     1861 ccgatcgata gccccggaca ggctgtgcaa gccgcaaacg cccgtccaga aagccgtctt
     1921 cgcgcgtatc actcatccag accggcgttg cgcatgatcg cgcgggccat gaattcgtct
     1981 cggtccgcga ccatcaggcg gcgtggcagc accccgatcg agccttccag aacgctcatg
     2041 tgctggtcca gttcgaaggt cggaatgtcc tcggcctcca gcagcgccac ggcgtgcgag
     2101 attcggacag gatcggtgct gcgaaaaagc tctttcatgg gtcagacgat aggcggcggt
     2161 tgcgcaattg tcgatggcat ggcaatgcgt tgggccagaa acgggatatg gccatgggtg
     2221 tgaacgaaaa cgtccagaaa ccgctggacc gtctggccga ggcgctggcg tccgagatgg
     2281 aggcggtgaa cgccctgatc cggcagcgca tggccagccg ccatgcgccg cgcatcccgg
     2341 aagtgaccgc gcatctgatc gaggcgggcg gcaagcggct gcgcccgatg ctgacactgg
     2401 cggcggcgaa actggcggga tatgacgggc cctaccatgt tcatctggcc gcgacggtcg
     2461 agttcattca taccgccacc ctgctgcatg acgacgtggt cgatgaaa
//
LOCUS       DTVW01001072            2062 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2316996, whole
            genome shotgun sequence.
ACCESSION   DTVW01001072 DTVW01000000
VERSION     DTVW01001072.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2062)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2062)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2062
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2316996"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..804)
                     /locus_tag="EYO87_14145"
     CDS             complement(<1..804)
                     /locus_tag="EYO87_14145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011750543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit 3"
                     /protein_id="HIC67111.1"
                     /translation="MAHAKNHDYHILSPSIWPFFGAVSAFFMLYGAVGWISADDVRLF
                     WIPVSGPWLFLIGFVGVLYVMYSWWADVIRESEAGDHTPVVRIGLQYGFILFIISEVM
                     FFVAWFWNWFKNALYPMGPQSPIKDGVWPPEGIQPFNPWELPLINTLILLLSGVAVTW
                     AHHAFVHENDRKTTINGLIVAILLGLSFSALQAYEYFHAAFGLSDTAYASAFYLATGF
                     HGLHVIIGTIFLAVCLFRIMRGQMDQKQHVGFEAAAWYWHFVDVVWLFLF"
     gene            complement(836..1399)
                     /locus_tag="EYO87_14150"
     CDS             complement(836..1399)
                     /locus_tag="EYO87_14150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase assembly protein"
                     /protein_id="HIC67112.1"
                     /translation="MSRNSRTVLGLVAVVLTMGALSWAAVPFYNWFCKVTGFAGTTQV
                     SKEAPDQVLEEIVRVRFDANVDKDVPWTFRPMQKKMEVRIGEDSMAYYEAINNSDETI
                     TGTASYNVAPDVAGYYFSKIACFCFTEQTLKPGERVEMPINFYVDPDLLADGDASWVR
                     DITLSYTFHRTEPKQAALDAQPASNVN"
     gene            complement(1396..1629)
                     /locus_tag="EYO87_14155"
     CDS             complement(1396..1629)
                     /locus_tag="EYO87_14155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019954745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67113.1"
                     /translation="MPMQAEHELHRRRWSRNVGLGLVLASLVVLVFALTVVKVRQGDL
                     MEGYDYQPRASVLPPAAAAPDAPARAEEKEMQP"
     gene            complement(1629..1943)
                     /locus_tag="EYO87_14160"
                     /pseudo
     CDS             complement(1629..1943)
                     /locus_tag="EYO87_14160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011750546.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="protoheme IX farnesyltransferase"
BASE COUNT          455 a          620 c          627 g          360 t
ORIGIN      
        1 gaacaggaac agccagacga catccacgaa gtgccagtac caggcggcgg cctcgaagcc
       61 gacatgctgt ttctggtcca tctggccgcg catgatgcgg aacaggcaga cggcaaggaa
      121 gatggtgccg atgatgacgt gcaggccgtg aaagccggtc gccaggtaga aggcgctggc
      181 ataggcggta tcggacaggc cgaaggctgc atggaagtat tcgtaggcct gcagcgccga
      241 aaagctgagc cccaggagga tggcgacaat cagcccgttg atcgtggtct tgcggtcgtt
      301 ttcatgcacg aacgcatgat gcgcccaggt cacggcaacc cctgacagaa gcaggatcag
      361 cgtgttgatc agtggcagtt cccacggatt gaagggctgg ataccttccg gaggccagac
      421 cccatccttg atcgggcttt gcggtcccat cggatacagc gcgttcttga accagttcca
      481 gaaccaggca acgaagaaca tcacttccga gatgatgaac aggatgaagc cgtattgcag
      541 cccgatccgc acgaccgggg tgtgatcgcc cgcctcgctt tcgcggatca cgtcggccca
      601 ccagctgtac atgacataca gcacaccgac gaaaccgatc aggaacagcc agggcccgct
      661 gaccggaatc cagaacaggc gaacatcgtc ggcactgatc cagcccacgg cgccatacag
      721 catgaagaac gccgagaccg cgccgaagaa gggccagatg gagggcgaaa ggatatggta
      781 gtcgtgattc ttagcatgcg ccatggtcgg gtccccgtcg gctcctcttt ctggatcagt
      841 tgacgttgct ggccggctgg gcgtcaagcg ccgcctgttt cggctcggtc cggtggaagg
      901 tataggacag ggtgatgtca cgcacccagc ttgcgtcgcc gtcggcaagc aggtcgggat
      961 cgacatagaa attgatcggc atttcgaccc gctcgcccgg tttcagcgtc tgctcggtga
     1021 agcagaagca ggcgatcttg ctgaaataat atccggcgac atcgggcgcg acattgtagc
     1081 tggccgtgcc ggtgatcgtc tcgtcgctgt tgttgattgc ctcgtaatag gccatcgagt
     1141 cctcgccgat acggacttcc atcttcttct gcatcggccg gaaagtccac ggcacatcct
     1201 tgtctacatt ggcatcgaaa cggacgcgga cgatttcctc cagaacctgg tcaggagcct
     1261 ctttcgacac ctgtgtggtt ccggcaaacc cggtcacctt gcaaaaccag ttgtagaacg
     1321 gcaccgcggc ccaggacagc gcgcccatcg tcagcacgac cgcgacaagg cccagaacgg
     1381 tgcgggaatt gcggctcatg gctgcatttc tttttcttcc gcccgggcgg gcgcgtcagg
     1441 cgcggccgct gccggcggca ggacggacgc ccgcggctga tagtcgtatc cttccatcag
     1501 gtcgccctga cgaaccttga ccaccgtcag cgcgaaaacc agcacgacca ggctggcaag
     1561 aaccagcccg agacccacgt tgcgcgacca gcggcggcgg tgaagttcgt gttccgcttg
     1621 catcggcatc accaggctcc ccattgattt tgaacgagca acgccaggaa atgcaggaag
     1681 aggtaataga gcgacagtct gaaaaaccgt ttctcgaacg catagccatc ggcgatggcc
     1741 gtctcttcgt cgcgcttcag gatgcgccag ccgccggcca tgaacagcgc gttcagaacg
     1801 accgaaaccg ccagatacag cgacccgccg acgggcgtca ggcccagcca cagcgcgaag
     1861 ggcgcaagaa ccagcgtata ggcaaagatg tgacggcggg tggccgcgcg gccatgcgtg
     1921 acggtcagca tcggcacgcc ggcccagatg ctggcatcga tgggtcagca cctcgcagtg
     1981 cccatgtctg atatcaccac ccctgacatg gaaacggcct gagaacgcgt taggtttatt
     2041 ccatcgaagt aagaaaccgg aa
//
LOCUS       DTVW01001073            3712 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2317915, whole
            genome shotgun sequence.
ACCESSION   DTVW01001073 DTVW01000000
VERSION     DTVW01001073.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3712)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3712)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3712
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2317915"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(565..894)
                     /locus_tag="EYO87_14165"
     CDS             complement(565..894)
                     /locus_tag="EYO87_14165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010393630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67114.1"
                     /translation="MNRTEFITVTAIILFGAFLLGWIASWIVHRLTRRTRADMSELDR
                     MAQQLHDTEEQRDQAVARLEEVEADLSSRLAGTESELQAAMDGLRESRAEVEELRDYI
                     ERKLVRR"
     gene            complement(925..3108)
                     /locus_tag="EYO87_14170"
     CDS             complement(925..3108)
                     /locus_tag="EYO87_14170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HIC67115.1"
                     /translation="MAPLRRRISPTLATILVLALAGGLSWWGARSTAAFIEDRSLQDV
                     QVALRSAGYDWAGVETDGLQVRLTGTAPSEVDRFRAMTQAATAVDSSRILDQMTVAAA
                     EALDPPDFKVELLRNPQGISLIGLVPASTDRNALLRSLRSETSAPKVTDLLETADYKL
                     PEGWQAALDYGIQAAQMAGSAKISIQPGAVTVAAITDSRAEKGRLETALKRAVPKGVR
                     LTSQITAPRPVIAPFTMRFVIDGDGPRFEACSAATEDGRQRILEAALSAGLQGKPGCT
                     LGLGAPSPDWDEAAEQAIAAVARLGQGTVTISDADVALTAPEAVTQVRFDEAAGRLEQ
                     ALPRVFSLHAELERESGQDAGPAEFIAALSGDRALSMRGRIADVPMREAVDSFARARF
                     SEVDSSLRSDAAVPDGWTVRVIGALEAMAVLESGTVQVTPDMLRMAGTSGDPNAAENA
                     AAALSNRIGAGARYALSIRYDRRLDPALDLPDGQECVRRLNLIMSESEIGFEPGKSTI
                     AGDPQPTLARLAEAMTECADFQIEAGGHTDAQGSQGFNADLSRARAQALVAAMAEAGI
                     DTANLTARGYGESQPIASNDTEAGREENRRIEFRLLSEMPIRNTPLPVPILREGVTSE
                     PVAPLQGPPAPDIATSSGMAPEGGAATSIDAVQGPQRPQAGESRAVPATVGVSEQVPA
                     LDDRDETVRLPVQTPGADTPRPSPRPEDAATSATGQEQQDTTPAP"
     gene            complement(3170..>3712)
                     /locus_tag="EYO87_14175"
     CDS             complement(3170..>3712)
                     /locus_tag="EYO87_14175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011746970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxybenzoate octaprenyltransferase"
                     /protein_id="HIC67116.1"
                     /translation="LLTLGPAAIWMGVISLALVAIYPFAKRFTWWPQIFLGLAFNWGV
                     MLAYAAHAGQVDLAPVVAWLGGIAWTIFYDTIYAHQDVEDDALIGVKSTARLFGRNSP
                     RYLARFAMLAVALLGLAILLSHRNLLIAAIGLAGFAAHLAWQLKNFKPDHGDSCLRLF
                     RSNRDAGLILALFLALAGLS"
BASE COUNT          574 a         1275 c         1241 g          622 t
ORIGIN      
        1 agcccgtcca gcgcctcggg ccagacggcc ttgtggatcg cgctgatcgg cggggccggg
       61 ctgacggcgc atttctgcat cgccaacgcc ctgcggctgg cgcccgcgac gctggtcatg
      121 ccgttcgatt tcctgcgcct gccggtgatc gcgctggtcg gcatggtgtt ttacgacgag
      181 ccgatcggac ctctggtcat cctgggcgcg acgctgatcc tgacgggaaa ctatttcaac
      241 atcagggcag aggcgcgcag gcgggctgcg gtctaaagcg gtatgattcc aggtcgaaac
      301 gtatcctgcc ttcttgaaac attggctgca tccgttgggt gaaaagcagt cgagcagaag
      361 ccattccctg cacatcaagg tcatgttccg ctaaccgccc gatcggcggg cgcgtcacga
      421 tcgcgatcgg cggctgccgc ccttgtcgca aaggcgcgat cctgatgcgc atcgccttgt
      481 tcagcacgcc ggcaggccgg gttgggacga cgggcgcgca gggcgaggat cggcggcacg
      541 gctcgccggc ttgcgcgacc gatctcagcg gcggaccagt ttccgctcga tatagtcgcg
      601 cagttcctcg acctcggcgc ggctttcgcg cagcccgtcc atcgcggcct gcagttccga
      661 ttcggtccct gcaaggcggc tggacaggtc tgcctcgacc tcttccaggc gcgcgacggc
      721 ctggtcgcgc tgttcttcgg tatcgtgcaa ttgctgggcc attcggtcca attcggacat
      781 gtcggcacgg gtgcgccggg tcaggcgatg gacgatccag cttgcgatcc agcccagcag
      841 gaaggcgccg aacaggatga tggcggtgac ggtgatgaat tcggttcggt tcatgcgctc
      901 tggttctggt cgctctggtt ttcgctatgg cgcgggggtg gtgtcttgct gttcctgccc
      961 ggtcgcggat gtcgcggcat cctcgggccg gggcgagggg cggggcgtgt cggcgccggg
     1021 cgtctgaacc ggaagcctaa cggtttcgtc gcgatcgtcc agtgccggaa cctgttcgct
     1081 gaccccgacg gtcgccggaa ccgcacggct ttcgcccgcc tgcggccttt gcggtccctg
     1141 aacggcatcg atcgacgtgg ccgcgccgcc ttcgggcgcc attcccgagg aggtcgcgat
     1201 gtccggcgcg ggcggtccct gcagcggcgc gaccggctcg ctggtgacac cctcgcgcag
     1261 gatcggcacc ggcagcgggg tattgcggat cggcatctcc gacaacagac ggaactcgat
     1321 gcgccggttc tcctcgcgcc cggcctcggt gtcgttgctg gcgatgggct ggctttcgcc
     1381 atagccgcga gcggtcaggt tggcggtgtc gatcccggcc tcggccatcg ccgccaccag
     1441 cgcctgcgca cgggcacgcg acagatcggc gttgaaccct tgcgatccct gcgcatcggt
     1501 atgcccgccg gcctcgatct ggaaatccgc gcattcggtc atcgcctcgg ccagccgcgc
     1561 cagcgtcggc tgcggatcgc ccgcgatggt ggacttgccc ggctcgaatc cgatctcgga
     1621 ttcggacatg atcaggttca gccgccgcac acattcctga ccatcgggca ggtccagcgc
     1681 cgggtccagc cggcggtcat agcggatcga cagggcatag cgcgcgccgg ccccgatccg
     1741 gttcgacagg gcggccgcgg cattttcggc ggcattcgga tcgcccgagg tgccggccat
     1801 ccgcagcatg tcgggagtga cctgaacggt cccgctttcc agaacggcca tcgcctccag
     1861 cgcgccgatc acgcgcaccg tccagccatc cggcaccgcc gcatcgctgc gcaggctgct
     1921 gtccacctcg gaaaagcggg cgcgggcaaa gctgtccacc gcctcgcgca tcggcacgtc
     1981 ggcgatccgg ccgcgcatcg acagcgcccg gtcgccgctc agcgcggcga tgaattccgc
     2041 cggcccggca tcctgcccgg attcacgctc tagttcggca tgaagcgaaa agacgcgcgg
     2101 cagggcctgt tccagccgac cggccgcttc gtcaaagcgc acctgcgtca ccgcctcggg
     2161 cgcggtcaga gccacgtcgg cgtccgaaat cgtgaccgtt ccctgcccca gccgcgccac
     2221 cgccgcgatg gcctgctcgg cggcctcgtc ccaatccggg cttggtgcgc caaggcccag
     2281 ggtgcagccc ggcttgccct gcaaccccgc gctcagcgcc gcctcaagga tccgctgtcg
     2341 cccgtcttcg gttgcggccg agcaggcctc gaacctgggg ccgtcgccgt cgatgacgaa
     2401 tcgcatcgtg aacggcgcga tgaccggacg cggcgcggtg atctggctgg tcagcctgac
     2461 gcccttgggc acggcgcgtt tcagcgcggt ttccagccgg cccttttcgg cgcggctgtc
     2521 ggtgatcgcg gccaccgtca ccgcgcccgg ctggatcgag atcttggcgc tgccggccat
     2581 ctgggcagcc tggatgccgt aatccagcgc cgcctgccag ccctcgggca gcttgtaatc
     2641 ggcggtctcc agcaggtcgg tcactttcgg cgccgaggtt tcgctgcgca gcgaccgcag
     2701 cagcgcgttg cggtcggtcg aggccggaac cagcccgatc agcgaaatgc cctgcgggtt
     2761 gcgcagcaat tcgaccttga aatcgggcgg gtccagcgcc tcggcggcgg cgacggtcat
     2821 ctgatccagg atgcgactgg aatcgactgc cgtggcggcc tgcgtcatgg cgcggaaacg
     2881 gtccacctcg cttggcgcgg tgcctgtcag ccgcacctgc aacccgtcag tctcgacccc
     2941 ggcccagtca tatcctgcgc tgcgcagcgc gacctggaca tcctgcaacg accgatcttc
     3001 gatgaaagcc gccgtggatc gcgcgcccca ccagctcagc ccgcccgcca gagcgaggac
     3061 gaggatcgtg gccaaagtcg gggaaatcct gcggcgcaag ggtgccatgc gatgggcctt
     3121 cggctgttgc gggtcgcatc cctctagcgt cggcccgccg ggcgtgcaat cagctcagcc
     3181 cggcaagggc gagaaacagc gcaaggatca gcccggcatc gcggttcgac cggaacaggc
     3241 gaagacagct atcaccatga tccggcttga aattcttcag ctgccaggcc agatgcgcgg
     3301 caaagccggc cagaccgata gcggcgatca agagattgcg atggctcagc aggatggcca
     3361 gccccagcag ggcgaccgcc agcatcgcga agcgcgccag atagcggggg ctgtttctgc
     3421 cgaacaggcg cgcggtggat ttgaccccga tcagggcgtc atcctcgaca tcctgatggg
     3481 catagatcgt atcgtagaag atggtccagg cgatgccgcc cagccaggcc acgacagggg
     3541 ccagatcgac ctggcccgca tgcgccgcat aggccagcat caccccccag ttgaaggcaa
     3601 gacccaggaa gatctgcggc caccaggtaa agcgtttcgc gaatggatag atcgccacca
     3661 gcgccagcga gatgacgccc atccagatcg ccgccgggcc cagcgtcagc ag
//
LOCUS       DTVW01001074            1138 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2318418, whole
            genome shotgun sequence.
ACCESSION   DTVW01001074 DTVW01000000
VERSION     DTVW01001074.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1138)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1138)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1138
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2318418"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(97..954)
                     /locus_tag="EYO87_14180"
     CDS             complement(97..954)
                     /locus_tag="EYO87_14180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018001071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-siderophore ABC transporter
                     substrate-binding protein"
                     /protein_id="HIC67117.1"
                     /translation="MVAALPLRVTAAAAAAAPAQRLAAIDWAMLETAIAIGHMPVAAS
                     ELLRFRADAVTPAVPRDVTDLGLRGSPNFELLQLSRPDLILTSPFYTRYEDKLRRIAP
                     VLSLTFYRPGDPPLPRALAALDDLARAIGDPGAGRRARTRAEAALDGVATGLAAFWDR
                     PVALIEIGDARHVRAFGPDSLFGSTLTRLGLENAWSGKTRFSFLAPVPMERLAAMPEA
                     RLVIVGNVPVEARRDLSRSVLWQALPPVRENRLYRLERVNAFGGAPAALRFAELLAAA
                     FQTGPRRAT"
BASE COUNT          197 a          395 c          408 g          138 t
ORIGIN      
        1 ccggccaggc ctgcatgggc aacaggccgc gagccgcagt cagccacatc agcgccgagg
       61 ccgccagcga cagcagaaga aggggcaggg cacgggtcat gtggcgcggc gcggtccggt
      121 ctggaaggct gcggccaaca gttccgcaaa gcgcagggcc gcaggcgcgc cgccgaacgc
      181 attgacccgt tccagccgat acaagcggtt ctcgcggacc ggcggcagcg cctgccacag
      241 aacgctgcgc gacaggtcgc gtcgggcctc gaccgggaca ttgccgacga tgaccagccg
      301 cgcctcgggc atcgcagcca ggcgttccat cgggacgggc gcgagaaagc tgaaccgggt
      361 cttgccggac caggcgtttt ccagacccag ccgggtcagc gtgctgccga acaggctgtc
      421 ggggccgaag gcccggacat ggcgcgcatc gccgatctcg atcagcgcca ccggcctgtc
      481 ccaaaaggcg gcaagcccgg tcgccacgcc gtccagcgcg gcttcggcgc gggtccgggc
      541 acgccgcccg gcgcccggat ccccgatcgc ccgcgccaga tcgtccagcg ccgccagcgc
      601 gcgaggcagg ggcgggtcgc ccggcctgta gaaggtcagc gacagcaccg gcgcaatccg
      661 gcgcagcttg tcctcgtagc gggtatagaa gggcgaggtc aggatcaggt cggggcgcga
      721 caattgcagc aattcgaaat tgggcgagcc gcgcaggccc agatcggtca cgtcccgcgg
      781 cacggcgggc gtcaccgcat cggcacgaaa gcgcagcaat tcgctcgcgg cgaccggcat
      841 gtggccgatg gcaatggcgg tttccagcat cgcccagtcg atcgcggcca gacgttgcgc
      901 gggggcggct gcagccgctg cggcggtcac gcgcaggggc agcgccgcca ccatcaggcc
      961 ggcggcggtc aggacggcgc gacgttcggt ccggaacgcg gcccgtcccg tcaccacgtg
     1021 taggcgaccc tggcgctgac agcgcgtcct tcgccatacg agcaatagga aaatccgcag
     1081 gcgctgacat agacctcgtc ggtcaggttg gtcaggttca gcgacatctc gacattgc
//
LOCUS       DTVW01001075            1226 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2318834, whole
            genome shotgun sequence.
ACCESSION   DTVW01001075 DTVW01000000
VERSION     DTVW01001075.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1226)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1226)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1226
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2318834"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..468)
                     /locus_tag="EYO87_14185"
     CDS             complement(<1..468)
                     /locus_tag="EYO87_14185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008885205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA preQ1(34) S-adenosylmethionine
                     ribosyltransferase-isomerase QueA"
                     /protein_id="HIC67118.1"
                     /translation="MKLSDFDFELPEGLIATRPARPRSAARLLLAEDGTIADRVVSDL
                     PAILRPGDLLVLNDTRVIPARLTGSRERDSAQGAVSARIEITLLEPAADGWRALAKPL
                     RKLREGEVIRFGPQLSAEVAAIGQGELQLRFDATGEAFDAALAQVGAMPLPPYI"
     gene            608..901
                     /locus_tag="EYO87_14190"
     CDS             608..901
                     /locus_tag="EYO87_14190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011539521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HIC67119.1"
                     /translation="MIVCHCTQITDHQIRAAIDWMRAADPQTIITPGKVYHALGQRPD
                     CGGCMKLFLDTMHRCDSLGVAPPILRVNTDKKEDSGHEGRRQGHRLSQCRTPV"
     gene            849..>1226
                     /gene="bfr"
                     /locus_tag="EYO87_14195"
     CDS             849..>1226
                     /gene="bfr"
                     /locus_tag="EYO87_14195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_354847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin"
                     /protein_id="HIC67120.1"
                     /translation="MKGDAKVIDYLNAALRSELTAVSQYWLHYRLQEDWGYGRIADKS
                     RAESIEEMHHADRLVQRIIFLEGHPNLQKLDPLRIGQNLKETMESDLAAEHDARTLYI
                     EARDHCEKVGDYVSKVLFEELIAD"
BASE COUNT          237 a          396 c          386 g          207 t
ORIGIN      
        1 gatatagggc ggcagcggca tcgcgccgac ctgcgccagc gcagcgtcga atgcctcgcc
       61 cgtggcatcg aaccgcaact gcaattcgcc ctgcccgatc gccgcgacct cggccgaaag
      121 ctgtggtccg aaacggatca cctcgccctc gcgcaacttg cgcagcggtt tggccagcgc
      181 gcgccagcca tcggcggccg gttccagcag cgtgatctcg atcctggcgc tgacggcccc
      241 ctgcgccgaa tcgcgttcgc ggctgccggt caggcgcgcg gggatgaccc tggtgtcgtt
      301 cagcaccagc aggtcgccgg gtcgcaggat cgcgggcaga tcgctgacaa cacgatccgc
      361 gatggtcccg tcctcggcca gcaacagtcg cgccgcgctg cgcgggcggg ccggccgcgt
      421 agcgatcagc ccctcgggca gttcgaaatc gaaatcggac agtttcatgg ccgggcttct
      481 gcgcctgacg gggccgcggg tcaagcatcg cgcgcaggcc gctcgccatg ccgtgatgag
      541 cgggcgaaaa aggcgggctt tacatgcccg acaaattcac taggtttcgc tcatccagga
      601 gttttccatg atcgtctgcc attgcaccca gatcaccgat catcagattc gcgccgccat
      661 cgactggatg cgtgccgccg atccgcaaac gatcatcacc ccgggcaagg tctatcacgc
      721 actgggccag cgccccgatt gcggcggctg catgaagctg tttctggaca ccatgcaccg
      781 ctgcgatagt ctgggtgtcg ccccgccgat cctgcgggtg aacacggaca agaaggagga
      841 ttccggtcat gaagggcgac gccaaggtca tcgactatct caatgccgca ctccggtctg
      901 aactgacggc cgtcagccag tattggctgc attaccggct gcaagaagat tggggttatg
      961 gacggatcgc ggacaagtcg cgggccgaat cgatcgagga aatgcatcat gccgaccggc
     1021 tggtccagcg gatcatcttt ctcgaaggcc atccgaacct gcaaaagctg gatccgctgc
     1081 ggatcgggca gaacctgaag gaaacgatgg aaagcgacct cgccgccgaa catgacgcgc
     1141 ggaccctgta tatcgaggcc cgtgatcatt gcgagaaggt cggcgattac gtcagcaagg
     1201 tcctgttcga ggaactgatc gccgac
//
LOCUS       DTVW01001076            3982 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2319549, whole
            genome shotgun sequence.
ACCESSION   DTVW01001076 DTVW01000000
VERSION     DTVW01001076.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3982)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3982)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3982
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2319549"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1243
                     /locus_tag="EYO87_14200"
     CDS             <1..1243
                     /locus_tag="EYO87_14200"
                     /inference="COORDINATES: protein motif:HMM:PF04909.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67121.1"
                     /translation="ALFADLAAAAGLDEPAIPPQPVIEQAPPAAARTSRPAAAPPVAG
                     GTALPGLARRQARQIAEGLYDPRNQAGDPLKQTLAGMMQWAELMTRDRARIVAQAINL
                     YGRPGEVQVFANQLLDLAYWLKAREVKQSDPDALIRLFAEISARRSDVLILNFVGFCP
                     LRAAIEGDVAHERVRRAVAEHGFAGVKLYPPMGFKPLENAGIGFGHARARPAGGGAAL
                     DRELRRLYGWCQANDVSIAAHASASMGAGPGTAAYSAPWLWAPALREFPDLRVSLAHF
                     GGFGGHGNPQWETELIGMLDDFPNLFFDTGFWTEAMAGAATRPAALATTRHLFEAEPL
                     AGERMLYGSDWSMIARMPAHPAYLAGLGSFAEELTGGGAPARAIMGDNARRWLGLDRD
                     GLQKARLARFHGDHPVWRRLA"
     gene            complement(1240..2559)
                     /locus_tag="EYO87_14205"
     CDS             complement(1240..2559)
                     /locus_tag="EYO87_14205"
                     /EC_number="3.2.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008234843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-glucosidase"
                     /protein_id="HIC67122.1"
                     /translation="MLPKRSDFPPGFLFGAATAAYQIEGSAFGGAGPSHWDTFAATPG
                     NVIDGSCGARACDHYHLWQTDLDLMRDAGFGAYRFSTSWARVMPDGRAPNPEALDFYD
                     RLVDGMLERGLQPFATLYHWDLPAALADKGGWRNRDVAGWFTDYARLVHARLGDRLAA
                     TATLNEPWCIAWLSHFLGHHAPGLRDIRAASRAMHHVLLAHGTASRALRADGAGNLGI
                     VLNFETAQPRDDSAQAAASAATQYAIYNQWFIRAVTGQPYPEAAMAGIGPHLPEGWQQ
                     DMDLVAAPLDWLGVNYYTRKLHGHAPGHWPNNADSDGPLPKTQMGWEIRPEGLTEFLI
                     RLSRDHVGDLPVYVTENGMSLAAGPDVTDDMPRVAFIRDHLRAARAAMDQGVNLRGFF
                     YWSLLDNYEWAFGYGPRFGLVHVDYTTMARTPKASWHAFRRMLGPDR"
     gene            2708..3133
                     /locus_tag="EYO87_14210"
     CDS             2708..3133
                     /locus_tag="EYO87_14210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011747583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor"
                     /protein_id="HIC67123.1"
                     /translation="MGDRRARQLEAALRDAGIRVTRQRAALLRVLAASQDHPDAAELH
                     RRAAAAGVSVSLATVYRTLNGLQAQGVIEKLEFQDQPARWEAADLRHHHHMIDVETGA
                     VTEFTSDRIERLQAEIAAEMGYDIVHHRLELYVRRRGAV"
     gene            3189..3557
                     /locus_tag="EYO87_14215"
     CDS             3189..3557
                     /locus_tag="EYO87_14215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017929340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YigZ family protein"
                     /protein_id="HIC67124.1"
                     /translation="MQVFDRIIVDRGSRYAVSGGRAASRAEVRALLAGLKRQKKFAKA
                     THNTWAAILDGEPVKDDDGEAGAGALILQMLDRAGLENHVVVVTRWYGGKQLGGDRFR
                     HVADAVRLYLRETGLGDPQA"
BASE COUNT          656 a         1274 c         1418 g          634 t
ORIGIN      
        1 ggcgcttttc gccgacctcg ccgccgccgc cggtcttgac gagcccgcaa tcccgccgca
       61 gccggtgatc gagcaggcgc ccccggcagc ggcccggacc agccgtcccg cggcggcccc
      121 gcccgtcgcc ggcggcacgg ccctgccggg tctcgcgcgc cgtcaggcac gccagatcgc
      181 ggaagggctt tatgatccgc gcaatcaggc tggcgatccg ctgaaacaga cgcttgcggg
      241 aatgatgcaa tgggccgaac tgatgacgcg cgaccgcgca cggatcgtgg cgcaggcgat
      301 caatctctat ggccgtccgg gcgaggtgca ggtctttgcc aatcagctgc tggatctggc
      361 ttactggctg aaggcacgcg aggtgaagca atccgatccc gatgcgctga tccggctgtt
      421 cgcggaaatc tcggcccgcc gcagcgatgt gctgatcctg aatttcgtgg gcttctgccc
      481 gcttcgcgct gcgatcgagg gcgatgtcgc ccatgaacgg gttcgtcgcg ccgtcgccga
      541 acacggcttt gccggcgtga aactgtatcc gccgatgggc ttcaagccgc tggagaatgc
      601 cggcatcggt ttcggccatg cccgcgcccg gcccgccggc ggcggcgcgg ccctcgatcg
      661 cgaactgcgc cggctttatg gctggtgcca ggccaatgat gtctcgatcg cggcccatgc
      721 ctcggccagt atgggcgccg ggccgggcac cgcagcctat tccgcaccct ggctctgggc
      781 acctgccttg cgcgaattcc ccgatctgag ggtcagcctg gcgcatttcg gcggcttcgg
      841 cggtcacggc aatccgcaat gggagaccga actgatcggg atgctggacg atttcccgaa
      901 cctgttcttc gatactggct tctggaccga ggcaatggcc ggcgccgcca cacggccggc
      961 cgcgctggcc acgacccggc acctgttcga ggccgagccg ctggcgggcg aacggatgct
     1021 atacggcagc gactggtcga tgatcgcccg gatgccggcc catccggcct atctggccgg
     1081 gctcggcagt ttcgcggagg aattgaccgg cggcggtgcg cccgcccgcg cgatcatggg
     1141 cgacaatgca cgacgctggc tgggcctgga tcgcgacggc ctgcaaaagg cgcggctggc
     1201 gcggttccat ggcgaccatc ctgtctggcg gcggctggcc tagcggtccg gtcccagcat
     1261 tcggcgaaag gcgtgccagc ttgccttggg cgtgcgcgcc atggtcgtgt agtcgacatg
     1321 gacaaggccg aaacggggac catagccgaa ggcccattca taattgtcca gcagcgacca
     1381 gtagaagaaa ccgcgcaggt tgacgccctg atccatcgcc gcgcgggcgg cgcgcagatg
     1441 atcgcggata aaggccacgc gcggcatgtc gtcggtcacg tccggcccgg ccgccagcga
     1501 catgccgttt tcggtgacgt agaccggcag atcccccaca tggtcgcgcg acaggcggat
     1561 caggaattcg gtcaatccct cgggacggat ttcccagccc atctgcgtct tgggcagggg
     1621 cccgtcgctg tccgcgttgt tgggccagtg gcccggggcg tgaccatgca acttgcgggt
     1681 gtagtaattg acgcccagcc agtccagcgg cgctgcgacg agatccatgt cctgctgcca
     1741 gccctcgggc agatgagggc cgattccggc catcgcagcc tcgggatagg gctggccggt
     1801 gacggcgcgg atgaaccatt ggttataaat cgcgtactgc gtcgcggccg aggctgcggc
     1861 ctgggcgctg tcgtcgcgcg gctgcgcggt ctcgaagttc agcacgatgc ccagattgcc
     1921 cgcgccgtcg gcccgcagcg cgcgggacgc cgtgccatgg gccagaagaa cgtgatgcat
     1981 ggcgcggctg gcggcgcgga tgtcgcgcag gcccggagcg tggtggccca ggaaatgcga
     2041 cagccaggcg atgcaccagg gctcgttcag ggtggcggtt gcggcaagcc ggtcacccag
     2101 ccgggcatgg accagccgcg catagtctgt gaaccagccg gcgacgtcgc gattgcgcca
     2161 gccgcccttg tcggccagcg cggcgggcag atcccagtga tagagcgtcg cgaagggctg
     2221 caggccgcgt tccagcatcc cgtccaccag gcgatcatag aaatccagcg cctccgggtt
     2281 gggcgcgcgg ccatcgggca tcacccgcgc ccaggatgtg gaaaagcgat aggccccgaa
     2341 gccggcatcc cgcatcaggt cgagatcggt ttgccacagg tggtagtgat cgcaggcccg
     2401 cgcaccgcag ctgccgtcga tgacgttgcc cggcgtcgcc gcgaaggtgt cccaatgcga
     2461 cggtccggcc ccgccgaagg ccgaaccctc gatctgatag gcggcggtgg cggccccgaa
     2521 aaggaaaccg ggcggaaagt cggatcgctt gggcagcatc ggatgtctcc ttcctgatcc
     2581 cggctttgcc atgtcgcggc gccggcgaaa agaggggtca ggcggcccga ttgcgtgcag
     2641 gcggtcctgc ggccccggaa gatgagaacc ggttgcacct gaatccgcga tgcggcatca
     2701 acggaagatg ggcgatcggc gcgcgagaca actggaagcc gctttgcgcg acgcgggcat
     2761 cagggtgaca cggcagcgcg ccgccctgct gcgcgtgctg gcggccagcc aggatcatcc
     2821 ggacgcggcc gaattgcacc ggcgcgccgc ggcggccggg gtttcggtgt cgctggcgac
     2881 ggtctatcgg acgctgaacg gtttgcaggc gcagggcgtg atcgagaagc tggaattcca
     2941 agatcagccg gcgcggtggg aggccgccga cctgcgccac caccatcaca tgatcgatgt
     3001 cgagaccggg gccgtgaccg aattcaccag cgaccggatc gagcggttgc aggccgagat
     3061 cgcggccgag atgggatatg acatcgtgca tcaccggctg gaactctatg tgcggcgcag
     3121 gggtgcggtc tagtcgggca ggcgcgcgtg cgccgcgacc gggcgggaca accggaaaga
     3181 aaacgaggat gcaggttttc gacaggatca tcgtcgatcg cgggtcgcga tacgcggtct
     3241 cgggggggcg ggcggccagc cgggccgagg tccgggcgct gctggccggt ctgaaacggc
     3301 agaagaaatt tgcgaaggcc acccataaca cctgggccgc gatcctggat ggcgaaccgg
     3361 taaaggacga cgatggcgag gcgggcgcgg gggcgctgat cctgcagatg ctggaccggg
     3421 ccgggctgga aaaccatgtc gtggtggtta cgcgctggta tggcggcaag caactgggcg
     3481 gcgacaggtt tcgccatgtc gcggatgcgg ttcggctcta tctgcgcgaa acgggactgg
     3541 gcgatccgca agcctgagac aaggcctgag gcgggaccga agggttcacc ttgcgggatg
     3601 cttcggcttc ggccccggcc gatggtcgcg ggcaggcgcg cggcagagcc ggaagaaccg
     3661 ccgcgggttt ccccgcggcg gcgccgttca gtcgcgatcc gagggcggga tcagccgccc
     3721 tgctgcgggg ccagcttgcc gttgcgctgc tggatcatca tgaaggtgtc aaaggtatat
     3781 tcggcggtct gggcatagag ataccagtca tcgcggaatt gcagcatggc ctcatactgt
     3841 ttcttgaagg actcgttctc ggccgaaatc tcggcataga cctcgcccgc ggcctcgaac
     3901 gccgccgtca ggatctcctc gctgaaagac cgcaactgcg cgcccgaacc gaccagttcc
     3961 ttcagcgcgg tcgggttctt ca
//
LOCUS       DTVW01001077            2707 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2320073, whole
            genome shotgun sequence.
ACCESSION   DTVW01001077 DTVW01000000
VERSION     DTVW01001077.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2707)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2707)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2707
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2320073"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1050
                     /locus_tag="EYO87_14220"
     CDS             <1..1050
                     /locus_tag="EYO87_14220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013068333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HIC67125.1"
                     /translation="RQQTYSCFLPISPTTGRVLYVPIKHVDAANGTITFDEDGEELTL
                     PVTGGRVKLQWKPDFGARWAALDVDFEMYGKDHSTNTPIYDGICEILGGRKPEHFTYE
                     LFLDHHGQKISKSKGNGLSIDEWLTYAATESLSYFMYQKPKTAKRMHFDVIPKAVDEY
                     HQQLRAYPEQAPEQQLANPVWHIHGGEVPASDMVVPFQMLLNLASVAGATDKEGLWGF
                     IRRYAPEASPQTHPGLDRAAGFAVRYFTDFVAPTRRFRAPTEVERRAMEDLASRLAAW
                     DQPADPEALQSMVFAIGKDHGFEPLRDWFSALYQVLLGADQGPRFGGFIALYGIDETR
                     LLIERALAGELAASH"
     gene            1229..>2707
                     /locus_tag="EYO87_14225"
     CDS             1229..>2707
                     /locus_tag="EYO87_14225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011747888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="right-handed parallel beta-helix
                     repeat-containing protein"
                     /protein_id="HIC67126.1"
                     /translation="MNIAITNGLMLMPPAFRAGLNAWSRTDGTSSSPTWASADNAGIV
                     PADQDFGACLEIYKQQTTTQIRFMGETPMIPGVYLRISARVKAVAGALCGVRIAGWAG
                     DGARNHVTGLVEVGPTVPLTTYGEVVEVSAIVGVGARAGVDMGWGTVPVFGHFGLDLV
                     GANGGAIRIESIRIDDITAAFIPSLIDWVDVRDFGARGDNATNDRAAFIAADQAANGG
                     WVLVPEGTFYISGDLGINSPIRFKGRIRTPDSTRVSFLQSFDFPTYADAFGNETLGMK
                     KALQALFGYTDHVTLDLCGRRVDLDEPLVIQDLAPDLNGFSNRRVIANGSIQAKPGTA
                     WDTGRWNSRASYDPATPDRLTNVANVAAIEIGSRVSGNGVGREVYVNGKNVAEGWLSL
                     SQPLYGGAATRSYTFERYRYLFDFSGIKQLSRLNFVNLDLSCESIASGIMLAPEGEMI
                     SVRDCYVTKPRDRGITSIGRGCQDMLIDRCQFLSSEIDLPAQQ"
BASE COUNT          482 a          863 c          876 g          486 t
ORIGIN      
        1 cgccagcaga cctattcctg tttcctgccc atcagtccga ccacggggcg ggtgctgtat
       61 gtgccgatca agcatgtcga tgcggccaac ggcacgatca ccttcgatga ggacggcgag
      121 gaattgacgc tgccggtcac gggcgggcgg gtaaagctgc aatggaagcc ggatttcggc
      181 gcacgctggg ccgcactgga tgtcgatttc gagatgtatg gcaaggatca cagcaccaac
      241 acgccgatct atgatggcat ctgcgagatt ctgggcggca gaaagcccga gcatttcacc
      301 tatgaactgt ttctggatca ccatggccag aagatcagca aatccaaggg caacgggctg
      361 tcgatcgacg aatggctgac ctatgcggcg accgaaagcc tttcctattt catgtatcag
      421 aagccgaaaa cggccaagcg gatgcatttc gacgtgatcc ccaaggctgt tgacgaatat
      481 caccagcagt tgcgcgccta tcccgagcag gcgccggagc agcagctggc gaacccggtc
      541 tggcatatcc atggcggcga ggtgccggcc tcggacatgg tggtgccgtt ccagatgctg
      601 ctgaacctgg cctcggtcgc gggggccacc gacaaggagg ggctttgggg cttcatccgt
      661 cgctatgcgc ccgaggccag cccccagacg catcccggtc tggatcgggc cgcgggcttt
      721 gccgtgcgat acttcaccga tttcgtcgcc ccgacgcggc ggttccgcgc cccgaccgag
      781 gtcgagcgcc gggcgatgga ggatctggcc tcgcggctgg ccgcatggga tcagcccgcc
      841 gatcccgagg cgttgcaaag catggtcttc gcgattggca aggatcacgg gttcgaaccg
      901 ctgcgcgact ggttcagcgc actctaccag gttcttctgg gggccgatca gggaccgcgt
      961 ttcggggggt tcatcgcgct ctacggcatc gacgagacgc gcctgctgat cgaacgggcg
     1021 ctggccgggg aactggccgc aagtcactga cgcgcagggc tggaacagtt cggacgaagg
     1081 ccgctctgct gtcctggtca ccatcgcgcg ttgcgtcccg acccggtgca gcgcgcgcgc
     1141 gtgcaaggtt tcgttaaccg gtcataaact attccttcac tccttcgtcg gggccacggc
     1201 cccttccgca gcggatgggg agacaggaat gaacatcgca atcaccaacg gcctcatgct
     1261 gatgccgccg gccttccgcg cggggctgaa cgcctggtcg cggaccgacg gcacctcgtc
     1321 cagtccgacc tgggccagcg ccgacaacgc cggaatcgtc ccggccgatc aggatttcgg
     1381 cgcctgtctg gagatctaca agcagcagac gacgacccag atccgtttca tgggcgagac
     1441 gccgatgatc cccggcgtct acctgcgcat ctcggcccgc gtgaaggcag tggccggcgc
     1501 gctgtgcggc gtgcgcatcg cgggctgggc aggtgatggc gcgcgcaatc atgtgaccgg
     1561 cctggtcgag gtcggcccga ccgtgccgct gacaacctat ggcgaggtgg tcgaggtcag
     1621 cgccatcgtc ggcgtcggcg cgcgcgcggg tgtcgacatg ggctggggca cggtgccggt
     1681 cttcggccat ttcggcctgg atctggttgg cgccaatggt ggtgcgatcc gcatcgaatc
     1741 gatccgcatc gacgacatca cagcggcctt catcccgtcg ctgatcgact gggtggacgt
     1801 gcgggatttc ggcgccaggg gcgacaatgc caccaatgac cgggccgcct tcatcgccgc
     1861 cgaccaggcc gccaatggcg gttgggtgct ggttcccgaa ggcacgttct atatcagcgg
     1921 cgaccttggg ataaacagcc cgatccgctt caagggcagg atccgcacac ccgattccac
     1981 ccgtgtctcg ttcctgcaaa gctttgattt cccgacctat gccgacgcct tcgggaacga
     2041 gacgctgggc atgaaaaagg cattgcaggc gctgttcggc tataccgatc atgtcacgct
     2101 ggatctgtgc gggcgtcggg tcgatctgga tgaaccgctg gtcattcagg atctggcccc
     2161 cgatctgaac gggttttcca atcgccgggt catcgccaat ggcagcatcc aggccaagcc
     2221 cggcaccgcc tgggacaccg gccgctggaa cagccgcgcc agctacgacc ccgcgacgcc
     2281 cgaccggctg acaaatgtcg ccaatgtcgc ggcgatcgag atcggcagcc gcgtgtccgg
     2341 caacggcgtc ggccgcgagg tctatgtcaa cggcaagaac gtggccgagg gctggctttc
     2401 gctgtcgcaa ccgctctacg gcggggcggc gacgcgcagc tacaccttcg agcgctaccg
     2461 ctacctgttc gacttttcgg ggatcaagca gctgagccgg ctgaatttcg tcaatctcga
     2521 cctcagctgc gaatccatcg cgagcggcat catgctggcc cccgaaggcg agatgatctc
     2581 cgtgcgcgac tgctatgtca ccaagcccag ggatcgcggc atcacctcga tcgggcgggg
     2641 ctgccaggac atgctgatcg accgttgcca attcctgtcc agcgagatcg atctgcccgc
     2701 gcagcag
//
LOCUS       DTVW01001078            2122 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_232202, whole
            genome shotgun sequence.
ACCESSION   DTVW01001078 DTVW01000000
VERSION     DTVW01001078.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2122)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2122)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2122
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_232202"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..263)
                     /locus_tag="EYO87_14230"
     CDS             complement(<1..263)
                     /locus_tag="EYO87_14230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_354158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HIC67127.1"
                     /translation="MRWTIPNILPLLRLAAAPAVPLMFLYFHRPWADWAALAIFLVAA
                     VTDWFDGYLARAWKQESRFGAAMDPIADKAMVVIAIIVITGYSG"
     gene            complement(423..806)
                     /locus_tag="EYO87_14235"
     CDS             complement(423..806)
                     /locus_tag="EYO87_14235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67128.1"
                     /translation="MPRVPSFGISADRKPVFAPDDILASDRWSDFDKEAIVLEAIVID
                     NNISGSDATLQVRAHDGMNWTIELGRRARNMAAGLTPAQALPGDPVSVRGRRLHRFGE
                     NRIKAMHLTIAGRDFDLYPASLEAS"
     gene            1108..1977
                     /locus_tag="EYO87_14240"
     CDS             1108..1977
                     /locus_tag="EYO87_14240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67129.1"
                     /translation="MPPDGTQDQLAQIGSLWIDGPLSWLEIASIRSFVELGHDFVLYT
                     YGHVPNLPDGAVLRDAREIWPNDDIIVHAKAKSPAIHADVFRAVMVRDTPRVWVDTDV
                     IAMQPFRAGMTWFLGHERDDKLLLGNAVMGFPPESRTKDLLAEFLTSDYPIPPWLPGH
                     RRGRMQAERDRGGDMDLGTLPWGTTGPRALTHFAQETGEIIYAQPSDVFFPISFQKRK
                     LLIENVNHARARELIEDGGALAVHLYSRWMRKHTRKARGGVPPRKSWIGHYLERKGFV
                     DYDAIEAEATRSA"
BASE COUNT          426 a          671 c          673 g          352 t
ORIGIN      
        1 ccggaataac cggtgatgac gatgatggcg atgaccacca tcgccttgtc ggcaatcgga
       61 tccatggccg cgccgaaccg gctttcctgt ttccaggcgc gggccagata gccgtcgaac
      121 cagtcggtca cggccgcgac cagaaagatc gccagcgccg cccaatcggc ccagggccga
      181 tgaaaataga gaaacatcag cggcacggcg ggcgccgcgg caagccgcag aagggggagg
      241 atattcggga ttgtccagcg catggcggca agctagtgcc tgcgcgcacg gttggaaaga
      301 ggcgctggtg tcacacggga ccgatctgcc gccccggcca cgcgaccggc gcgcagtcgg
      361 ggcgtgaggc ggcctgccgt ctggtcagtt tccatcgcgg cccggcatgc ggccctgcgg
      421 gatcacgatg cctcgagact ggccggatag agatcgaaat cacgcccggc aatggtcagg
      481 tgcatcgcct tgatccggtt ctcgccgaaa cggtgcaggc ggcggccgcg gaccgagacg
      541 ggatcgcccg gcaacgcctg cgccggggtc agccccgccg ccatgttgcg ggcgcggcgg
      601 cccagttcga tggtccagtt catgccgtca tgggcgcgga cctgcagcgt cgcatcgctg
      661 cccgagatat tgttgtcgat gacgatcgcc tccagcacga tcgcctcctt gtcgaagtcg
      721 gaccagcggt cgctggcaag aatgtcgtcg ggcgcgaaga cgggtttgcg atccgctgaa
      781 atgccgaaag acggtacgcg gggcatggca gcctccttca tcaaaagggg tgagcagatc
      841 gcaaccatag cgcgaagagc cgagtctcgc gcggtaggaa aacaccgcaa aaactgaccg
      901 ggcggatagg tgccgaaggc agggcttgaa cttgtctcga tggcccatca gtgtcggaaa
      961 ggatcgacaa aatcgcgccc tggcgaacca tgacaggcgg aagcgccggc ggctgaaatt
     1021 gttccccgtg gaaagaccgg tccacaaagc gatggtaggc aaattccgac cgggccgggc
     1081 acgagaacac agcagaagga ccagcgcatg ccgcctgatg gcacccaaga ccagcttgcg
     1141 cagatcggat cgctgtggat cgacgggccg ctgtcatggc tggaaatcgc ctcgatccgc
     1201 agctttgtcg aactgggtca cgatttcgtt ctctatacct acggccatgt gccgaacctg
     1261 cccgatggcg cggtgctgcg cgatgcccgc gagatctggc ccaatgacga catcatcgtc
     1321 catgccaagg cgaaaagccc cgcgatccat gccgatgtct tccgcgccgt catggtgcgc
     1381 gacacgccgc gcgtctgggt cgataccgat gtcatcgcaa tgcagccctt ccgcgccggg
     1441 atgacctggt ttctcggcca tgaacgcgac gacaagctgc tgctgggcaa tgccgtcatg
     1501 ggatttccgc ccgaatcgcg gaccaaggat ctgctggccg aattcctcac ctccgattat
     1561 ccgattccgc cctggctgcc cggccaccgt cgcggacgga tgcaggccga acgcgatcgc
     1621 ggcggcgaca tggatctggg caccctgccc tggggcacga ccggtccccg ggccctgacg
     1681 cactttgcgc aggaaaccgg cgagatcatc tatgcccagc ccagcgatgt gtttttcccg
     1741 atcagcttcc agaaacgcaa gctgctgatc gagaacgtca atcacgcccg agcccgcgaa
     1801 ctgatcgagg acggcggcgc gctggccgtc cacctttatt cgcgctggat gcgcaagcat
     1861 acccgcaagg cgcgcggcgg ggtgccaccg cgcaaatcct ggatcggtca ttatctggaa
     1921 cggaaaggtt ttgtcgacta cgacgcgatc gaggccgagg ccacgaggag cgcctagcgg
     1981 tgctggacgt cccagagctc atggcgccca tcagcctgca cgtggtctat ttggacagac
     2041 caaaacacca tctgtttaca tcgatctcaa accacatagt cgaattccac aaccgtggtg
     2101 attcctgggt tgatccgatc ca
//
LOCUS       DTVW01001079            1552 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2323473, whole
            genome shotgun sequence.
ACCESSION   DTVW01001079 DTVW01000000
VERSION     DTVW01001079.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1552)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1552)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1552
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2323473"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(215..1171)
                     /locus_tag="EYO87_14245"
     CDS             complement(215..1171)
                     /locus_tag="EYO87_14245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011747051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HIC67130.1"
                     /translation="MPDDRHDPPHAASAAAASAPPPVPPRMSPPAQDRTGLGILLMSA
                     SALIFSMQDGFSRVLGAEYPPVLVVMIRYWVFAAFVIVLVSRQPGGLRRAVRTRRPLT
                     QIARGVLLVLEVVVMVEAFVRLGLVETQAVFIAYPLLVAALSGPVLGEKVGWRRWAAI
                     GIGFSGILVILQPGGGVMRIESLLPFLAAFMFALYGLLTRHVSRDDPSMVSFFWTGVA
                     GAVAITLIGIWDWRWLAPVDWIWMAGLCICGMSSHYLMIRAYELAEASALQPFAYTQL
                     VWASLIGVFVFGEVLRPSVVLGAMIVVLAGLFTLWRARVRSA"
     gene            complement(1273..>1552)
                     /locus_tag="EYO87_14250"
     CDS             complement(1273..>1552)
                     /locus_tag="EYO87_14250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67131.1"
                     /translation="FQGFRTAVLVAVNLASCAPPGQAVIVAAGRYDGYWERGNKPWDV
                     AAGILIVREAGGFVEGIGEGDDALETGRMIAANPQIFQPFAKVIRSRD"
BASE COUNT          303 a          555 c          501 g          193 t
ORIGIN      
        1 cgccgccgcc gctgcggctg acgctggcgc tgtcgtcccg gccacccgga aaacccttca
       61 tcgggccacg cctgcccgaa ggctggatca atcatgcggt cgaggcggtc gcgtccgatt
      121 gaggcgtggt caggaacggc gccaggcatc cgcaatcggt cgggcgcacc gggccgacat
      181 ctcgttccgg tccccggtgc tgcgcctcga ggtctcaggc cgatctgacc cttgcgcgcc
      241 acagcgtgaa caggccggcc aacaccacga tcatggcacc cagaacgacg ctggggcgca
      301 gcacctcgcc gaagacgaac acgccgatca gactggccca gaccagttgc gtgtaggcaa
      361 agggctgcag cgcggaagcc tcggccagtt cataggcgcg gatcatcaga taatgcgagc
      421 tcatgccgca gatgcacaat cccgccatcc agatccagtc caccggcgcc agccagcgcc
      481 agtcccagat cccgatcagc gtgatcgcca ccgcccccgc gacgccggtc cagaagaagc
      541 tgaccatcga gggatcgtcg cgcgagacat gccgcgtcag caaaccatag agcgcgaaca
      601 tgaacgccgc gagaaagggc agcagcgatt cgatccgcat gacgccgccg ccgggttgca
      661 ggatcacgag aatgcccgaa aagccgatcc cgatcgccgc ccagcggcgc cagccgacct
      721 tctcgcccag gaccgggccg gagagggccg cgaccagcag cggataggcg atgaagacgg
      781 cctgcgtctc gaccaggccg aggcggacga aagcctcgac catgaccacg acctccagca
      841 ccagaagcac gccccgcgcg atctgcgtca gcggccgcct ggtgcgcacc gcccgcctca
      901 gaccgcccgg ctgacgcgag accaggacga tgacgaaagc cgcgaagacc cagtatcgga
      961 tcatcaccac aagaaccggc ggatattccg cgcccagcac ccgcgaaaag ccatcctgca
     1021 tcgaaaagat cagcgcgctg gcggacatca gcaggatccc cagcccggtc ctgtcctgcg
     1081 cgggcgggga catccgcggc ggcacgggcg gcggcgcaga ggccgcggcc gccgaggcgg
     1141 catggggcgg gtcgtgacga tcgtcgggca tgggcgcggt cctctgtata ccgcccatgc
     1201 gcggcgcgcg aggctacgtc aagtcatggc cggaatgcgc ttgccgcaga tcggcccggc
     1261 gcgaccgcgc ggtcagtcgc ggctgcgaat caccttggcg aagggctgga atatctgcgg
     1321 attggcggca atcatgcggc ccgtttccag cgcatcgtcg ccctcgccga tgccttcgac
     1381 gaaaccgccg gcctcgcgca caatcagaat gcccgccgcc acgtcccagg gcttgttgcc
     1441 gcgttcccag tagccatcgt atcgcccggc cgcgacgatg acggcttggc cgggtggagc
     1501 acaggacgcc agatttacgg caaccaggac cgcagtccgg aagccctgga ac
//
LOCUS       DTVW01001080            1502 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2325550, whole
            genome shotgun sequence.
ACCESSION   DTVW01001080 DTVW01000000
VERSION     DTVW01001080.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1502)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1502)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1502
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2325550"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1502)
                     /locus_tag="EYO87_14255"
     CDS             complement(<1..>1502)
                     /locus_tag="EYO87_14255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013833338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HIC67132.1"
                     /translation="KPDKPSNAAMRVEMGGGDVEGALASAAATVTGRYSLEPVHQGYI
                     EPHACVASWNGDGQAQIWTSSQGHFSVRALTASVLAMPQADIRVTPLEIGGGFGGKTT
                     IYLEPVAMVLSKKSGRPVRLAMTREEVFRATGPAPGAVIDVRLGAAADGTLVAADVEF
                     LYHSGAYTANDAGAGVSSAIGHYRIANTRVVGVEVLCNRPAAKAYRAPGAPQVNFAVE
                     SAMDELAGKLGIDPLELRLKNAVVEGDPQTTGLPWGRIGYVECLEAAKAHPHWSAPLG
                     PNQGRGIAGGYWGNYGGPSTVNVSVAEDGTVTVATGSPDIGGSRASMAIMAAEVLDIP
                     YERVRAVVADTASIGVSMVTGGSRTTFATGMATVQAAEEVKRILCERAARIWGVAADQ
                     VEWRSGEVTCLDGEKQGQVMSAAAIAGRSFHSGGPIAAVAALSAKGWLPGFGVHICDT
                     EVDPETGHVKIVRYTAIQDVGIAIHPDYVEGQIQGGAAQGIGWALNEAYI"
BASE COUNT          239 a          543 c          476 g          244 t
ORIGIN      
        1 agatataggc ctcgttgagc gcccagccga tgccctgtgc cgcgccgccc tggatctgtc
       61 cttcgacata gtccgggtgg atcgcgatgc cgacgtcctg gattgcggtg taacgcacga
      121 tcttcacgtg cccggtctcg ggatcgactt cggtatcgca gatgtgcacg ccgaagcccg
      181 gcagccagcc tttggcgctc agcgccgcca ccgccgcgat cggtccgccg gaatggaacg
      241 aacgcccggc gatggcagcg gcggacatga cctgtccctg cttctcgcca tcgaggcagg
      301 tgacctcgcc cgaacgccac tcgacctgat ccgcagcaac gccccagatc cgcgcagcgc
      361 gttcacacaa aatgcgcttc acctcttcgg cggcctgcac cgtcgccatg cccgtcgcga
      421 acgtcgtgcg gctgccgccg gtcaccatcg acacgccgat ggacgccgta tcggcaacga
      481 cagcgcgaac ccgttcgtag ggaatgtcca gcacttcggc cgccatgatg gccatggagg
      541 cgcggctgcc gccgatgtcc gggctgccgg tagcaaccgt gacggtgcca tcctcagcga
      601 cgctgacgtt caccgtcgag ggaccgccgt agttgcccca gtatccgccc gcaatgccgc
      661 gcccctgatt ggggccgagc ggcgccgacc agtgcggatg ggccttggcg gcttcgaggc
      721 attcgacata gccgatgcgc ccccagggca gcccggtcgt ctgcggatcg ccttcgacga
      781 ctgcgttctt caggcgcagc tccagcggat cgataccgag cttgcctgcc agttcgtcca
      841 tcgcgctttc gaccgcgaag ttcacctgcg gcgcacccgg tgcgcggtag gccttggccg
      901 ccgggcggtt gcacagcact tcgacgccga cgacgcgggt attggcgatg cggtagtgcc
      961 cgatcgcgct cgacacgccc gcgcctgcat cgttcgcggt ataggcgcca gagtggtaga
     1021 gaaactcgac gtccgcagcg accagcgtgc cgtcggcagc ggcgccgagc cgcacgtcga
     1081 ttaccgcacc cggcgccggg ccggtcgcgc ggaacacttc ctcgcgagtc atggccagac
     1141 gcaccgggcg gccggacttc ttcgagagaa ccatcgccac cggctcgagg tagatggtcg
     1201 tcttgccgcc aaagccaccg ccgatttcca gcggcgtcac gcggatatcg gcctgcggca
     1261 ttgccagcac agacgccgtg agcgcgcgca ccgagaagtg cccctggctg gacgtccaga
     1321 tctgcgcctg cccgtcgcca ttccacgagg ctacacaggc atggggctcg atatacccct
     1381 gatgcaccgg ttccagcgag taacgcccgg tcacggtagc cgcggccgag gcgagcgccc
     1441 cttcgacgtc gccgccaccc atctcgacgc gcattgccgc attcgagggc ttgtccggct
     1501 tc
//
LOCUS       DTVW01001081            2034 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2325740, whole
            genome shotgun sequence.
ACCESSION   DTVW01001081 DTVW01000000
VERSION     DTVW01001081.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2034)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2034)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2034
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2325740"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..525)
                     /locus_tag="EYO87_14260"
     CDS             complement(<1..525)
                     /locus_tag="EYO87_14260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011750531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="triosephosphate isomerase"
                     /protein_id="HIC67133.1"
                     /translation="MAPRKLAAGNWKMNGDLAALSQIDALIAARPDPGCDVLICPPAL
                     LIQPMKARIGAHPIALGGQDCHARAFGAHTGDIAAVQLKDAGADYVILGHSERRADHG
                     ETDADVSAKAAAAHDAGLIAIICVGETEAQRDDDEALEVIAAQLEGSIPPGANAGNTV
                     IAYEPVWAIGTGRTP"
     gene            complement(608..979)
                     /locus_tag="EYO87_14265"
     CDS             complement(608..979)
                     /locus_tag="EYO87_14265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011750530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly accessory protein"
                     /protein_id="HIC67134.1"
                     /translation="MFGIPGKSPVTITPSAERQIVRLMAGKQAYGLRIGLKKGGCAGM
                     EYTMDLAQSPDKADEVVEQGEARVLIAPMAQMFLFGTEIDYESGLIESGFRFRNPNVT
                     DACGCGESVRFEPLEGSRTAE"
     gene            1206..>2034
                     /locus_tag="EYO87_14270"
     CDS             1206..>2034
                     /locus_tag="EYO87_14270"
                     /EC_number="2.3.1.179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HIC67135.1"
                     /translation="MRRVVVTGLGMVTPLASGVEATWQRLLAGTSGAGRITRFDPSDV
                     VTKYACEIPFGDGSDGTFNPDDWMAPKDRRKVDDFILYGMAAADQAVKDAGWEPEDEE
                     DRLRTGVMIGSGIGGLTSIAETAVLIKERGPKRVSPFFIPGALINLISGQVSIRYGFK
                     GPNHAVVTACSTGAHAIGDAARLIMLGDADVMIAGGAEAPISEIGIAGFNACKALSTR
                     RDDDPTAASRPYDKDRDGFVMGEGAGVVVLEEYEHARARGATIHAEVLGYGLSGDAYH
                     "
BASE COUNT          332 a          640 c          702 g          360 t
ORIGIN      
        1 gggggttcgg ccggtgccga tggcccagac cggttcatag gcgatcaccg tgttgccggc
       61 attggcgccg ggcgggatcg agccctcgag ttgcgcggcg atcacctcca gtgcctcgtc
      121 atcgtcgcgc tgcgcctcgg tctcgccgac gcagatgatc gcgatcaggc cggcgtcatg
      181 ggccgccgca gccttggccg agacatcggc gtcggtctcg ccatgatcgg cgcggcgttc
      241 ggaatggccg agaatgacgt aatcggcgcc ggcatccttc aactgcacgg cggcgatgtc
      301 gccggtatgg gcgccgaagg cgcgcgcgtg gcaatcctgc cccccaagcg cgatcggatg
      361 ggcgccgatt cgcgccttca tcggttggat cagcaatgcc ggcgggcaga tcagcacgtc
      421 gcagccgggg tcgggtcggg ccgcgatcag cgcgtcgatc tgcgacagcg ccgccagatc
      481 gccgttcatc ttccaattgc ccgcagccag cttgcgtggt gccatgccct gtcctccgct
      541 tcgcacaatc aaaggcttag ggaaacgcgg ccctggctgc aacgatgatt gtcgccgacg
      601 tggcggttca ctcggccgtg cgactacctt ccaacggctc gaagcggacg gattcgccgc
      661 agccgcaggc atcggtcaca ttcggattgc gaaagcggaa tccggattcg atcaggccgg
      721 attcatagtc gatctcggtc ccgaacagga acatctgcgc catgggcgcg atcagcacgc
      781 gggcctcgcc ctgttcgacg acctcgtctg ccttgtcggg ggactgggcc agatccatcg
      841 tgtattccat tcccgcgcaa ccacccttct tcaggccgat ccgcaggccg taggcctgtt
      901 tgcccgccat cagccgcacg atctgacgct cggcggaggg cgtgatggtg acggggcttt
      961 tgccgggaat gccgaacatg ggcgggcctt tcgttgcatc tgtcacagaa gatagggtcc
     1021 ggggtgctcg cgctcaagcc cctgcgctgg ccggcggccg gacgatgcag ggctgcgatc
     1081 acatcggaac atttccccgc gatgacggcg gttgcctgcg cgtccttccg ccgacgcggc
     1141 gttgcgcggc aaaacccccg cgtgtatcag gttgcccagg aacggcagtt tgaaggatga
     1201 cgcggatgcg cagggttgtt gtcaccggac ttgggatggt cacgccgctg gcttcgggcg
     1261 tcgaggcgac gtggcagcgg ttgctggccg ggacgtccgg ggcaggccgg atcacgcgat
     1321 tcgatcccag cgatgtggtc acgaaatatg cctgcgagat cccgttcggc gatggcagcg
     1381 acggcacctt caatcccgac gactggatgg cgcccaagga ccggcgcaag gtcgatgatt
     1441 tcatcctcta cggcatggcc gccgccgatc aggcggtgaa ggatgccgga tgggagcccg
     1501 aggacgagga agaccgtctc cgcaccggcg tcatgatcgg ttcggggatc ggcgggctga
     1561 catcgatcgc ggaaacggcg gtgctgatca aggaacgcgg gccaaagcgt gtctctccct
     1621 tcttcattcc gggtgcgctg atcaacctga tctcgggaca ggtcagcatc cgttacggct
     1681 tcaaggggcc gaaccacgcc gtggtgacgg cctgttcgac gggggcccat gccatcggcg
     1741 atgcggcgcg gctgatcatg ctgggcgatg cggacgtgat gatcgcgggc ggtgccgagg
     1801 cgccgatcag cgaaatcggg atcgccggct tcaacgcctg caaggcgctg tccacgcggc
     1861 gcgatgacga tccgactgcc gcgagccgcc cctatgacaa ggaccgcgac ggtttcgtga
     1921 tgggcgaagg cgccggtgtc gtcgtccttg aggaatatga acacgccagg gcgcgcggtg
     1981 cgacgatcca tgccgaggtt ctgggctatg ggctgtcggg cgacgcctat caca
//
LOCUS       DTVW01001082            2232 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2325807, whole
            genome shotgun sequence.
ACCESSION   DTVW01001082 DTVW01000000
VERSION     DTVW01001082.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2232)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2232)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2232
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2325807"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            76..807
                     /locus_tag="EYO87_14275"
     CDS             76..807
                     /locus_tag="EYO87_14275"
                     /EC_number="1.8.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010393690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoadenylyl-sulfate reductase"
                     /protein_id="HIC67136.1"
                     /translation="MLDHGLDTRAGRLNDRYRHHAATEVLRRAVTDPDLGRVALVSSF
                     GAESVVLLHMISVVSPGLPVLFIDTQMLFSETLDYQRAVSARLGLTDVRVIGASDAEV
                     ARHDPDGTLHQVDPDACCNFRKSLPLEAALSGFDAWITGRKRFQNGQRSALDFFEPEA
                     PSRLRVNPLAHWRPEDVQDYMIENNLPRHPLVSKGYPSIGCAPCTSPVGPGEDPRAGR
                     WRGRDKSECGIHFIGGRMVRGKVSA"
     gene            804..1190
                     /locus_tag="EYO87_14280"
     CDS             804..1190
                     /locus_tag="EYO87_14280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF934 domain-containing protein"
                     /protein_id="HIC67137.1"
                     /translation="MTEQLNSEQILVRDDGFHPLDIAAEVTLAPDTTPEELVDHLHRA
                     VIAVDFPTFSDGRGFSLGRRLREIGFTGRLRATGRLIADQYAMARRVGFDEVQIAPDI
                     AARQPAQQWLARADWKDWDHRARLAG"
     gene            1243..2082
                     /locus_tag="EYO87_14285"
     CDS             1243..2082
                     /locus_tag="EYO87_14285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010393694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin--NADP reductase"
                     /protein_id="HIC67138.1"
                     /translation="MTLDLTVADAAPKPAKTLADAQTVTAVKHWTDSLFSFRVTRPAS
                     LRFRSGEFVMIGLPGDNGKPILRAYSIASPNWDDELEFYSIKVPDGPLTSRLQHIRPG
                     DQIILRPKPVGTLVLDALLPGRRLWFLATGTGVAPFASLMRDPETYERYEQVVMMHTC
                     RTAEELTYGRELVGDLRNDPLLGEIYGEDFADRLLYYPTTTRAESPRMGRITDNITSG
                     KVFEDLNLPPISPGTDRAMICGSLAFNVDVKAVLEGFGLHEGANSEPKEFVVEKAFVG
                     DGV"
BASE COUNT          375 a          744 c          713 g          400 t
ORIGIN      
        1 ccgagcgttt catcgacgcc tatcgccgcc ttgggcccgt gccgttcaag gccgcgctct
       61 atcccgagac ggcggatgct tgaccacggc ctcgacacac gtgcggggcg gctgaacgac
      121 cggtatcggc accatgccgc gaccgaggtt ctgcgccgtg ccgtcaccga ccccgatctg
      181 gggcgggtcg cactggtttc gtccttcggg gcggaatcgg tggtcctgct gcacatgatc
      241 agcgtcgtat cgcccggcct gcccgtcctg ttcatcgata cgcagatgct gttttcggaa
      301 acgctggact atcagcgcgc ggtttcggcc cggctgggtc tgaccgatgt gcgggtgatc
      361 ggcgccagcg acgccgaggt cgcgcgccac gatcccgacg gcaccctgca ccaggtcgat
      421 cccgatgcct gctgcaattt ccgcaagtcc ctgccgctgg aggctgcgct gtccggtttc
      481 gacgcatgga tcaccggccg aaagcggttc cagaatggtc agcgttccgc cctggacttt
      541 ttcgaacccg aggccccgtc gcggttgcgc gtcaacccgc tggcccattg gcgccccgaa
      601 gacgtgcagg actacatgat cgagaacaac ctgccgcgtc atccgcttgt ctcgaagggt
      661 tatccgtcca tcggttgcgc gccctgcacc tcgcccgtcg ggccgggcga ggatccccgc
      721 gccggccgtt ggcgcggccg tgacaaatcc gaatgcggca ttcacttcat tggcgggcgc
      781 atggtccgcg gaaaggtttc ggcatgaccg agcagttgaa cagcgaacaa atcctcgtcc
      841 gcgatgacgg ctttcacccg ctggacatcg ccgccgaggt gacgctggca cccgacacca
      901 cgcccgagga actggtcgat catctgcatc gggccgtgat cgccgtcgat tttccgacat
      961 tctcggatgg gcgcggcttc tcgctgggtc gccgtctgcg cgagataggg ttcaccgggc
     1021 gtctgcgtgc gaccggccgc ctgatcgcgg atcaatacgc catggcccgt cgcgtgggct
     1081 ttgacgaggt gcagatcgcc ccggacatcg cagcccgcca gccggcccaa caatggctgg
     1141 cccgcgccga ttggaaggac tgggaccacc gcgcgcgcct tgcaggctga tccggccttt
     1201 cggcgcgacg ccaaatccct taagacattc aggaaagaag acatgacgct ggacctgacc
     1261 gtggccgatg ctgccccgaa acctgccaag acgcttgccg acgcgcagac cgtgaccgcc
     1321 gtgaaacact ggacggacag ccttttctcg ttccgcgtga cgcggcccgc cagcctgcgc
     1381 ttccgctcgg gcgaattcgt gatgatcggg cttccgggcg ataacggcaa gccgatcctg
     1441 cgggcctatt ccatcgcctc gcccaactgg gatgacgaac tggaattcta ttccatcaag
     1501 gtgcccgacg gcccgctgac ttcgcggctg caacatatcc ggcccggcga tcagatcatc
     1561 ctgcggccga aacccgtggg gacgctggtc ctcgacgcat tgctgccggg cagacggctg
     1621 tggtttctgg ccaccggcac cggcgtcgcg ccctttgcct cgctgatgcg cgatcccgaa
     1681 acctacgagc gctacgagca ggtcgtgatg atgcatacct gccgcacggc ggaggaactg
     1741 acctatggcc gcgagctggt cggggacctg aggaatgatc cgcttctggg cgaaatctac
     1801 ggcgaggatt tcgccgatcg actgctttac taccccacga ccacccgcgc ggaatcgccg
     1861 cggatgggcc ggatcaccga caacatcacc tcggggaagg tcttcgagga tctgaacctg
     1921 ccgccgatct cgcccggaac ggatcgcgcg atgatctgtg gcagcctggc cttcaacgtc
     1981 gatgtgaagg cggtgctgga aggcttcggc ctgcacgagg gcgccaattc cgaaccgaag
     2041 gaattcgtgg tcgaaaaggc ctttgtcggc gacggtgtct gaggggcagc ctccgcggcg
     2101 tctctgttgc tcaaataccc tcaagggggg ccgggggaca gaatgtcccc cggccgtcgc
     2161 gggacgcgga tcagaagaac gcctgcaacc cggtgatcgc gcggccaagg atcagcgcgt
     2221 ggatgtcgtg cg
//
LOCUS       DTVW01001083            1901 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2326653, whole
            genome shotgun sequence.
ACCESSION   DTVW01001083 DTVW01000000
VERSION     DTVW01001083.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1901)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1901)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1901
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2326653"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            211..1572
                     /locus_tag="EYO87_14290"
     CDS             211..1572
                     /locus_tag="EYO87_14290"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011747622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HIC67139.1"
                     /translation="MRLSRYFLPLLKEDPKEAQIVSHRLMLRAGMIKQQAAGIYSWLP
                     MGYKVLRRIEQIVHEEQQRAGHVPLLMPTLQPADLWRESGRYDDYGEEMLRIRDRHKR
                     DLLYGPTNEEMITDIFRSGVNSYKDLPLTLYHVQWKFRDEIRPRFGVMRGREFLMKDG
                     YNFDLTREDALHAYNRHLVSYLRTYERMGLRAIPMRADSGPIGGDDTHEFLVLAETGE
                     SEVFYDSAITDLTFGDRQIDYDSHEECQAVMDEFTSRYARTDETHDPALFDQIPQERR
                     RQARGIEVGQIFYFGTKYSEPMGATVVGPDGARVPVHMGSHGIGVSRLLGAIIEASHD
                     DKGIIWPEGVTPFHVGLVNLKQGDSSTDSACEAIYAELQARGLDPLYDDRNERAGAKF
                     AAMDLIGLPWRITVGPRGLSNNRVELTCRKTGDSEEMSPKDAIARVTGVYRPILAMPA
                     PAP"
     gene            1569..>1901
                     /locus_tag="EYO87_14295"
     CDS             1569..>1901
                     /locus_tag="EYO87_14295"
                     /inference="COORDINATES: protein motif:HMM:PF11157.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2937 family protein"
                     /protein_id="HIC67140.1"
                     /translation="MIGLLRLVVAVAFAAALSQFPAFSDQYVQRLGGRVDALARVAAE
                     FDASAERAGLTRVEALADLSGSTFRDAHQADMRRTFRRLDRARADLQMLRLAGPLERM
                     ALPHRLRDS"
BASE COUNT          338 a          631 c          617 g          315 t
ORIGIN      
        1 gatcagcagg gccagcgccg cgacgcccca ccagatcagt tgccgctgaa cgggcatgtg
       61 cattgccggc ctcgtcatgt tcacattgtc gcgaatgtgg ctgtctcaag ccgcggttgc
      121 aaggcttcgc ctgccgcgag acggccggtt cttggcaacc ggcggccgat ccgctaacgc
      181 tgcggccgag ccaggtgaag gattccgccc atgcgtctgt cgcgctattt cctgcccctc
      241 ctgaaagagg atcccaaaga ggcccagatc gtcagccatc ggctgatgtt gcgtgcgggc
      301 atgatcaagc agcaggcggc gggcatctat tcctggcttc cgatgggcta caaggtgctg
      361 cgccggatcg aacagatcgt gcacgaggaa cagcagcgcg cgggccatgt tccgctgctg
      421 atgccgacgt tgcagcccgc cgatctgtgg cgcgagagcg gccgctatga cgattacggc
      481 gaagaaatgc tgcgcatccg tgatcgccac aagcgcgatc tgctctacgg gcccaccaat
      541 gaggagatga tcaccgacat cttccggtcg ggcgtgaaca gctacaagga tctgccgctg
      601 accctgtatc acgtgcagtg gaaattccgc gacgagatcc ggccacgttt cggggtcatg
      661 cggggccggg aattcctgat gaaggacggc tataatttcg acctgaccag ggaagacgcg
      721 ctgcacgcct ataaccggca cctggtcagc tatctgcgca cctacgaacg gatggggctg
      781 cgggcgatcc cgatgcgcgc cgacagcggt ccgatcggcg gcgacgacac gcatgaattc
      841 ctggtcctcg ccgagaccgg cgaatccgag gtcttctatg acagtgcaat caccgacctg
      901 accttcggag accggcagat cgactacgac agccacgagg aatgccaggc ggtgatggac
      961 gaattcacca gccgctatgc ccgcaccgac gaaacccacg acccggcact gttcgatcag
     1021 atcccgcagg aacgccgccg ccaggcccgc ggcatcgagg tcggccagat cttctatttc
     1081 ggcaccaagt attccgaacc gatgggcgcc accgtcgtcg gccccgacgg cgccagggtt
     1141 ccggtccaca tgggcagcca cggcatcggc gtcagccgcc tgctgggcgc gatcatcgag
     1201 gccagccacg acgacaaggg catcatctgg cccgaaggcg tgacgccctt ccatgtgggc
     1261 cttgtcaatc tgaagcaggg cgattcctcg accgacagcg cctgcgaggc gatctatgcc
     1321 gaattgcagg cgcgcgggct ggacccgctc tatgacgacc ggaacgaacg ggcgggggcg
     1381 aaattcgcgg ccatggacct gatcggcctg ccctggcgga tcaccgtcgg tccgcgcggt
     1441 ttgtcgaaca accgggtcga actgacctgc cgcaagaccg gcgacagcga ggaaatgtcg
     1501 cccaaggacg ccatcgcgcg ggtgaccggg gtctatcgcc cgatcctcgc gatgccggcc
     1561 ccggcgccgt gatcgggctg ctgcggctgg tcgtggcggt ggcatttgcc gccgcgctgt
     1621 cgcagttccc ggccttttcg gatcagtatg tccagcgcct tggcggtcgg gtcgatgccc
     1681 tggcgcgtgt cgccgccgaa ttcgacgcca gtgccgaacg cgccgggctg acacgggtcg
     1741 aggcgctggc cgacctgtcg ggcagcacct tccgcgacgc ccatcaggcc gacatgcgcc
     1801 gcaccttccg gcggctggac cgtgcgcgcg ccgatttgca gatgctgcgg ctggccggtc
     1861 cgctggaacg catggccctg ccccatcgcc tgcgcgacag c
//
LOCUS       DTVW01001084            1359 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2327671, whole
            genome shotgun sequence.
ACCESSION   DTVW01001084 DTVW01000000
VERSION     DTVW01001084.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1359)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1359)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1359
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2327671"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(368..>1359)
                     /locus_tag="EYO87_14300"
     CDS             complement(368..>1359)
                     /locus_tag="EYO87_14300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010394057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="adenosine kinase"
                     /protein_id="HIC67141.1"
                     /translation="IGNAVMDVIAPTDEARLGALGVTKGIMQLIERDRSEYLMAAQAD
                     DHGPGRAQARLVPGGSVANTLAGIGALGLKTAFIGRVAEDALGLSYAEQTEAAGTVFV
                     NPPVAGDALPTSRSIILVTPDGERSMNTYLGISAELGPDDVNPSVFQGAGWLFLEGYL
                     FDKPKGKEAFLKAADCCHKAGGQAGIALSDPFCVDRHREDFRRLVAGPMDYVIGNVHE
                     WTSLYQTEDLEQALALARADCDTVICTRSGEDAILIRGDERVGAAVHKVVPVDATGAG
                     DQFAAGLIHGLALGAPLEVAGRMGCIAAAEVISHVGPRPERDIRAQFRAEGLI"
BASE COUNT          234 a          499 c          424 g          202 t
ORIGIN      
        1 ccacgctcat gcgtcggacc ggcgaagccc gcgatcggac cgatcgccgt cagaccggac
       61 atgaaaccgc cccgcgcaag acgacgctgc cttgcagatg cgcggcggcc attcaggttc
      121 gctcacggcc ctcggccaaa gggctggcgc cggggcagag ggcggaatgt tcaaatcacc
      181 gtgggatatc cgcatcgacc ggatccagga ctggcgcacg gcagaatcgc catccaggcc
      241 gcaggcggcc aatcggtcac aaccgcgcca actccagccc gggtgcgccc tcgttctccg
      301 tgagcaaata ccccgggggg cgcggggggc tggccccccg ccgtcgcggg acgcaggaaa
      361 tcctgcctca gatcaggcct tcggcgcgga actgcgcacg aatgtcgcgt tcggggcgcg
      421 gaccgacatg actgatcacc tccgcggcgg cgatgcagcc catccggccg gcgacctcca
      481 gtggcgcgcc aagcgccaat ccatggatca gccctgccgc gaattgatcg cccgcccccg
      541 tcgcgtccac cggcacgacc ttgtggaccg ccgccccgac ccgttcgtcg ccgcgtatca
      601 ggatcgcgtc ctcgcccgag cgggtgcaga tcacggtgtc gcaatcggcg cgggccagag
      661 ccagggcctg ctccagatcc tcggtttgat aaagcgaggt ccattcatgg acattcccga
      721 tcacgtaatc catcggtccc gcgaccagcc ggcggaaatc ctcgcggtgc cgatcgacgc
      781 agaacggatc cgacagcgcg atgcccgcct gtccgcccgc cttgtgacag caatcggcgg
      841 ccttcaggaa cgcctccttt cccttcggct tgtcgaaaag atagccctcc agaaacagcc
      901 atccggcacc ctgaaagacc gacgggttca cgtcgtcggg gccgagttcg gccgaaatgc
      961 ccagataggt gttcatcgag cgttcgccat ccggcgtcac caggatgatg ctgcgcgagg
     1021 tcggcagcgc gtcacccgca accggtgggt tgacaaagac cgtccccgca gcctcggtct
     1081 gctcggcata ggaaaggccc agggcatcct cggccacgcg gccgatgaag gcggtcttca
     1141 gccccaacgc gccgatcccc gccagcgtgt tggcgaccga gccgcccggc accagccgcg
     1201 cctgcgcccg gcccggcccg tgatcgtcgg cctgggcggc catcagatat tcggacctgt
     1261 cgcgttcgat cagctgcatg atccccttgg tcacgccaag cgcgcccagc cgcgcctcgt
     1321 ctgtgggcgc gatcacgtcc atgacggcat tgccgatcc
//
LOCUS       DTVW01001085            1659 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2330328, whole
            genome shotgun sequence.
ACCESSION   DTVW01001085 DTVW01000000
VERSION     DTVW01001085.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1659)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1659)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1659
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2330328"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..99
                     /locus_tag="EYO87_14305"
     CDS             <1..99
                     /locus_tag="EYO87_14305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007817788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1178 domain-containing protein"
                     /protein_id="HIC67142.1"
                     /translation="IHGEARPDDAKKLIEDGVPIAPLPFLPRQKSN"
     gene            262..1518
                     /locus_tag="EYO87_14310"
     CDS             262..1518
                     /locus_tag="EYO87_14310"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010395338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HIC67143.1"
                     /translation="MPLLVMKFGGTSVADLDRIRNAAAKVQREVERGHDVIVIVSAMS
                     GKTNELVGWVEKTSPLFDAREYDAVVSSGENVTAGLMALTLQEMGVPARSWQGWQVPI
                     NTTAQHSAARFVDIPRGNLDQKFAEGFRVAVVAGFQGLAPDGRITTLGRGGSDTTAVA
                     FAAAFDAERCDIYTDVDGIYTTDPRITSKARKLDRIAFEEMLELASLGAKVLQTRSVE
                     LAMRYKVRLRVLSSFEDTTEDSGTLVCDEGEIMESKVVNGVAYSREEAKITLVTVEDR
                     PGISAGIFAPLADAGVNVDMIVQNISEKNFEHHQGSVTDMTFSVPINQVDRAKRAMEQ
                     ARAAGTVSYDELIVDTEVAKVSVVGIGMRSHAGVAARMFKALAEENINIKVIATSEIK
                     ISVLIDRKYMELAVQALHDAFGLEAA"
BASE COUNT          321 a          521 c          535 g          282 t
ORIGIN      
        1 atccacggcg aggcgcgccc ggacgatgcg aaaaagctga tcgaggacgg agttccgatc
       61 gcgccgctgc ctttccttcc gcgccagaaa tccaactgaa ccggcacctt cgcactcttg
      121 gaaaatacct cgggggtcgt cgcggaacgc gacgaggggg cagcgccccc tgccgccccc
      181 gtcacccgcc ttgcctcttg cggtttcatc cccccgccca tacaagccgc gccgaaagaa
      241 acccttggct ggaggcccgc gatgccgctt ctggtgatga aattcggcgg cacctcggtc
      301 gccgatctgg accggatcag gaatgccgcc gcgaaggtgc agcgcgaggt cgagcgcggc
      361 catgacgtca tcgtcatcgt cagcgccatg tccggcaaga ccaacgagct ggtcggctgg
      421 gtcgagaaga cctcgccgct gtttgatgcg cgcgaatatg atgccgtggt cagttcgggc
      481 gagaacgtca ccgccggatt gatggcgctg acgcttcagg aaatgggcgt tccggcgcgc
      541 agctggcagg gctggcaggt tccgatcaac accaccgcgc aacattccgc ggcgcgtttc
      601 gtcgatatcc cgcgcggcaa tctggatcag aagttcgccg aaggcttccg ggtcgcggtg
      661 gtcgcgggtt tccagggtct ggcgcccgat ggccggatca ccacgctggg ccggggcgga
      721 tcggacacga ccgccgtggc cttcgcggcc gccttcgacg ccgaacgctg cgacatctat
      781 accgatgtcg atggcatcta cacgaccgac ccgcgcatca cctcgaaagc gcgcaagctg
      841 gacaggatcg cgttcgagga gatgctggaa ctggccagtc ttggcgcgaa ggtgctgcag
      901 acccgctcgg tcgagctggc gatgcgctac aaggtgcggc tgcgcgtgtt atcctcgttc
      961 gaggacacga ccgaagattc gggcactctg gtctgcgatg agggagaaat catggaatcg
     1021 aaagtcgtca atggcgtcgc ctattcccgc gaggaagcca agatcaccct tgtcacggtc
     1081 gaggaccgtc ccggcatttc cgccggcatc ttcgcgcccc tggcggatgc gggcgtgaac
     1141 gtggacatga tcgtgcagaa catctccgag aagaatttcg aacatcacca gggctcggtc
     1201 acggacatga ccttctcggt gccgatcaat caggtggatc gcgccaagcg cgccatggaa
     1261 caggcccgcg ccgcgggcac ggtttcgtat gacgaattga tcgtcgatac cgaggtcgcc
     1321 aaggtcagcg tggtgggcat cgggatgcgc agccatgccg gcgtcgcagc ccggatgttc
     1381 aaggcccttg ccgaggaaaa catcaacatc aaggtcatcg ccaccagcga aatcaagatt
     1441 tccgttctga tcgaccgcaa atatatggaa ctggccgttc aggcgctgca tgatgccttc
     1501 ggcctcgaag cggcctgatc ccctcgggtg atcccgaacc gacaggccct cgggccggac
     1561 gcgacgacgg aaggcgggaa ggcattgcag gaccgcaagg acagtgattc gcgcaagctg
     1621 ctgcggcggc tgaaggaaat tctggccgcc gccggcgac
//
LOCUS       DTVW01001086            1320 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2330833, whole
            genome shotgun sequence.
ACCESSION   DTVW01001086 DTVW01000000
VERSION     DTVW01001086.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1320)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1320)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1320
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2330833"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(275..1258)
                     /locus_tag="EYO87_14315"
     CDS             complement(275..1258)
                     /locus_tag="EYO87_14315"
                     /inference="COORDINATES: protein motif:HMM:PF00067.20"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HIC67144.1"
                     /translation="MPFHERFVQTSMLELDGADHDRLRRAVFPFFTKTRLESLRDWVA
                     DHLGARLDALLSRERIDFVTDLAHDLPGQVIGHLIGTDPAMARQMTEWSEAVVTYFDV
                     SNRTPARKARAEQATRLFHDLLRDLCAQRRIRPRDDLTSALTLAEARGQMSGDEVIST
                     LMQLLHAGHGSTVDAMGNGMAALLAHPDQMALLRADRALMPQAVQEMFRHAAPLPFFH
                     RYASVDLTICGRDWPRGTKFGLLYASANRDPAAFEGPDRFDVTRRPNLHLAFGAGPHV
                     CLGNNLARLNMEVLFDALLARTTRIEAAGEATWKTGLQAHGPTSLPVALSG"
BASE COUNT          211 a          450 c          460 g          199 t
ORIGIN      
        1 ccacggtctc aagcccgttg ggcagggtga agctgctgac gccttccggc atatcggcca
       61 gcgccggcag cgcggacagc gacaaggcaa gggctgcggg caaaggggcg cggcgcatcg
      121 ggtcggaacc tcctcgtgtg gtggcggaaa tctgccgccc gcgcaggcgg ggcgcaaccc
      181 gtctcgcggc attgtgtgcg gcgcgacgca gcgcgctgtg ggcgatcgcg cccacgccgg
      241 cgaacggcgc ggcgccagcc tgtgtttccg acctctaccc tgacagcgcg accggcaggc
      301 tcgtcgggcc gtgggcttgc aggccggtct tccatgtcgc ctcgcctgcg gcctcgatcc
      361 gcgtcgtccg cgccagcaag gcgtcaaaca gaacttccat gttcagccgc gccagattgt
      421 tgcccaggca gacatgcgga ccggcgccga aggccagatg caggttcggc ctgcgggtca
      481 cgtcgaaccg gtccggtccc tcgaacgccg cgggatcgcg gttggcgctg gcatagagca
      541 ggccgaactt cgtgcccctc ggccaatctc gcccgcagat cgtcagatcg accgaggcat
      601 agcggtgaaa gaagggcagc ggcgcggcat ggcgaaacat ctcttgcacc gcctgcggca
      661 tcagcgcgcg atcggcgcgc agcagcgcca tctggtcggg atgggccagc agcgcggcca
      721 tgccgttgcc catcgcgtcc acggtcgagc catggcccgc gtgcagaagc tgcatcaggg
      781 tcgagatcac ctcgtcacca ctcatctgcc cgcgggcctc ggcaagggtc agggcgctgg
      841 tcagatcgtc gcgcggccgg atccggcgct gcgcgcacag atcccgcaac aggtcgtgaa
      901 acagccgtgt cgcctgctcg gcccgcgcct tgcgcgcggg ggtgcggttg ctgacgtcga
      961 aataggtcac gacagcctcg gaccattccg tcatctgccg cgccatcgcc gggtcggtgc
     1021 cgatcaggtg cccgatcacc tggcctggca ggtcatgggc cagatcggtc acgaagtcga
     1081 tccgttcgcg ggacagcagc gcgtccagcc gcgcgcccag atggtccgca acccaatcgc
     1141 gcaggctttc cagccgggtc tttgtgaaga agggaaagac cgcacggcgc agccggtcat
     1201 ggtcggcgcc gtccagctcc agcatcgagg tctgcacgaa gcgttcatga aacggcatgt
     1261 cgtggaaatt ctcggcccgt cgcaggcggt ctctgtcgcc gggcgcggca aaggcggcgg
//
LOCUS       DTVW01001087            1704 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2331610, whole
            genome shotgun sequence.
ACCESSION   DTVW01001087 DTVW01000000
VERSION     DTVW01001087.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1704)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1704)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1704
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2331610"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..277
                     /locus_tag="EYO87_14320"
     CDS             <1..277
                     /locus_tag="EYO87_14320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011750178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase 2 family
                     protein"
                     /protein_id="HIC67145.1"
                     /translation="DDRAIAALVALPGVGTWTAEIYLKFALGRADVLAAGDLALQEAA
                     RMLYGLEARPGPAALRAMSQPWRPWRAVAARGLWAYYRQAKGREGIR"
     gene            274..927
                     /locus_tag="EYO87_14325"
     CDS             274..927
                     /locus_tag="EYO87_14325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009571155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase"
                     /protein_id="HIC67146.1"
                     /translation="MTDLTSARKGPEKADAVVVFLHGYGADGADLLGLADPLSPHLPG
                     TDFHAPDAPERSINNPMGYQWFPIPWLDGSTEAQAQAAMGRSITALNAFLDRVLADEG
                     LEADRMIVIGFSQGTMMALHVLPRRDAEVAGIVGFSGRLLVPEMLEDEARVKPPVLLI
                     HGDQDPMVPFQDMGLAGDALQAAGFEVFAHVMEGTGHGIAPDGLSVALAFIKDRLGK"
     gene            complement(961..1395)
                     /locus_tag="EYO87_14330"
     CDS             complement(961..1395)
                     /locus_tag="EYO87_14330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009563280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glyoxalase/bleomycin resistance/extradiol
                     dioxygenase family protein"
                     /protein_id="HIC67147.1"
                     /translation="MTTTAPPLLGTLESALYADDLEAATRFWREVMGLCDFQSVPGRH
                     VFFRVSDGPPPQVLLVFRPDATETPPAPDATLPVPPHGARGPGHVCLAAGPETLDAWR
                     DHLLAHGIEIEADFRWPNGARSLYFRDPAGNSVELADPAIWG"
BASE COUNT          282 a          549 c          597 g          276 t
ORIGIN      
        1 cgatgacagg gccatcgccg cgctggtcgc cctgcccgga gtcgggacat ggacggcgga
       61 gatctatctg aaattcgcgc tcggccgggc cgacgtgctg gccgcgggcg atctggcgct
      121 gcaagaggcc gcgcgcatgt tgtatgggct ggaggcccgt cccggccccg ccgccctgcg
      181 cgcgatgtcg cagccctggc ggccctggcg cgcggttgcg gcgcgcgggc tgtgggccta
      241 ttaccggcag gccaaaggac gcgagggaat tcgatgaccg acctgacatc cgcccgcaag
      301 ggccccgaaa aggccgatgc cgtcgtggtc ttcctgcacg gctacggcgc cgatggggcc
      361 gatcttctgg gccttgccga cccgctgtcg ccgcatctgc cgggcacgga cttccatgcc
      421 cccgacgcgc cggaacgcag catcaacaat ccgatgggct atcagtggtt tccgatcccc
      481 tggctggacg gctcgaccga ggcgcaggcg caagcggcaa tgggtcggtc gatcaccgcg
      541 ttgaacgctt ttctggacag ggttctggcc gacgaggggc tggaggcgga ccgcatgatc
      601 gtgatcggct tttcgcaggg cacgatgatg gcgctgcatg tgctgccgcg ccgggacgcc
      661 gaagtggcgg gcatcgtcgg cttttccggc cggttgctgg tgcccgagat gctggaggac
      721 gaggcccgcg tcaagcctcc ggtcctgctg atccacggcg accaggaccc gatggtgccg
      781 ttccaggaca tggggctggc gggcgatgcg ctgcaggccg ccgggttcga ggtcttcgcc
      841 catgtcatgg agggcaccgg ccacggcatt gcgccggacg ggctgtccgt ggcgctggcc
      901 tttatcaagg accggctggg gaaatagggc cgacggacag gcggccgtga cgaagatctc
      961 tcagccccag atcgcgggat cggccaattc gaccgaattg cccgccggat cgcgaaaata
     1021 caacgagcgg gcgccattcg gccagcgaaa gtcggcctcg atctcgatac catgcgcgag
     1081 cagatggtcg cgccaggcgt ccagagtttc gggaccggcg gccagacaga catggcccgg
     1141 cccgcgcgcg ccatggggcg gcaccggcag tgtcgcatcc ggtgccggtg gcgtttcggt
     1201 ggcgtctggg cggaagacca gcagaacctg cgggggcggc ccatcgctga cccggaagaa
     1261 gacgtgccgt ccgggaacgg actgaaaatc gcaaagcccc atcacctccc gccagaacct
     1321 cgtggcggcc tccagatcgt cggcataaag cgcgctttcc aacgtgccca gaaggggcgg
     1381 ggctgtggtg gtcatggccg cattctgcca cgcggccggg cagtgggcaa atcgtcacgc
     1441 tgtcgtcacg caaacgcgct atccgatcgg tggttcgaat acatgcgggg gcttgccaga
     1501 cgggtagccc gatatatagt cggtcccgtg gatagaccaa ggccccggac cttgccaatt
     1561 cgggaccggc tggaaaaggc gacatgctga acgagcgtca tcatacggat ttccggaccc
     1621 atttcgttcg cgaacccgcc ggtctgcgcc atcacccggc gctggtgctg aatgccgatt
     1681 accggccgct cagctattat ccgc
//
LOCUS       DTVW01001088            1569 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2334117, whole
            genome shotgun sequence.
ACCESSION   DTVW01001088 DTVW01000000
VERSION     DTVW01001088.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1569)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1569)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1569
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2334117"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..603
                     /locus_tag="EYO87_14335"
     CDS             <1..603
                     /locus_tag="EYO87_14335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010391877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="saccharopine dehydrogenase"
                     /protein_id="HIC67148.1"
                     /translation="IGGGICGPVHAYADQHRLIEELRAQMDATARPRPHAIVIGAKGR
                     VGRGAADLLSAMGVPVTRWDMEETAHGGVFPEILAHEIFVNAILARPGAPVFVPASAV
                     APGRALRVIGDVACDPTSDFSPIKVYERTTTWDAPVLRVADNPPLDVMAIDNLPSMLP
                     RESSQDYAAQLLPVLAQLDRPEQGPWGRARSIFRDHLERV"
     gene            606..>1569
                     /locus_tag="EYO87_14340"
     CDS             606..>1569
                     /locus_tag="EYO87_14340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011048992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="saccharopine dehydrogenase"
                     /protein_id="HIC67149.1"
                     /translation="MTIHWIGTGLSAIPGLRRLLRTGAPVTVWNRTEARAREAVGDLA
                     GDIRCYSFTALEDAVGPGDIIVSMLPADQHLALARMAIGKGAHFVSSSYIAPEMAALD
                     QAAKAAGVALVNEVGLDPGIDHLMAHDLVADFRRAARPGDMVRFTSYCGGIPKYPNPF
                     RYKFSWSPLGVLRALRAPSRSLRGGAVRDVSRPWHAIEGYDAPLPVPEHFEIYPNRDS
                     LPFVRQYGFDADWNLQDFVRGTIRLKGWAEAWAPVFDEIEDLDGEAAEPRLRQMAEEF
                     WRDNAYAEGEPDRVVLFVALRAERDGAAVWHKEWVMDAQGDRDRT"
BASE COUNT          235 a          508 c          559 g          267 t
ORIGIN      
        1 atcggcggcg gcatctgcgg gccggtccat gcctatgccg accagcaccg gctgatcgag
       61 gaattgcgcg cgcagatgga tgccacggcc cggccccggc cccatgccat cgtcatcggc
      121 gccaaggggc gcgtgggcag gggcgcggcc gatctgctgt cggcgatggg cgtgcccgtg
      181 acccgctggg acatggagga gaccgcgcat ggcggcgtct ttcccgaaat cctggcgcac
      241 gagattttcg tcaatgcgat cctcgcccgg cccggcgccc cggttttcgt gccggccagc
      301 gcggtggcgc cgggccgtgc gctgcgggtg atcggcgatg tggcctgcga cccgaccagc
      361 gatttttccc cgatcaaggt ctatgagcgc acgacgacat gggatgcccc ggtgctgcgg
      421 gtggccgaca atccgccgct ggacgtgatg gccatcgaca atctgccctc gatgctgccg
      481 cgcgaatcct cgcaggacta cgcggcgcaa ttgctgcccg tcctggcgca gctggaccgg
      541 cccgaacaag gcccgtgggg ccgcgcccgg tcgatctttc gcgatcatct ggaaagggtt
      601 tgaccatgac aatccactgg atcggcaccg gcctcagcgc cattcccggc ctgcgcaggc
      661 tgctgcgaac gggcgcgccg gtcacggtct ggaaccggac cgaggccagg gcgcgcgagg
      721 ccgtgggcga cctggcgggc gacatccgct gctacagctt taccgcgctg gaagacgcgg
      781 tggggccggg cgacatcatc gtgtcgatgt tgcctgccga tcagcacctg gcgctggcga
      841 ggatggccat cggcaagggc gcgcatttcg tcagttccag ctatatcgcg ccggaaatgg
      901 cggcgctgga tcaggcggcg aaggccgcgg gtgtggcgct ggtgaacgag gtcggcctgg
      961 atcccggcat cgatcatctc atggcacatg atctggtggc ggatttccgt cgtgcggcgc
     1021 ggccgggcga tatggtccgc tttacctcgt attgcggcgg gattccgaaa tatcccaatc
     1081 cgttccgcta caagttcagc tggtcgccgc tgggcgtgct gcgggccctg cgcgcaccgt
     1141 caagatccct gcgcggcggt gcggtgcgcg acgtgtcccg tccctggcac gcgatcgagg
     1201 gttacgacgc gcccctgccc gtgcccgaac atttcgagat ctatccgaac cgcgactcgc
     1261 tgcccttcgt gcggcaatat ggctttgatg ccgactggaa cctgcaggat ttcgtgcgcg
     1321 gcaccatccg gctgaagggc tgggccgagg catgggcgcc cgttttcgac gagatcgagg
     1381 acctggacgg cgaggccgcc gaaccgcgcc tgcgccagat ggccgaggaa ttctggcgcg
     1441 acaatgccta tgccgagggt gaacccgacc gggtcgtgct gttcgtggcc ctgcgcgccg
     1501 aacgcgacgg cgcggcggtc tggcacaagg aatgggtgat ggatgcgcag ggcgatcggg
     1561 atcgcactg
//
LOCUS       DTVW01001089            2448 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2334187, whole
            genome shotgun sequence.
ACCESSION   DTVW01001089 DTVW01000000
VERSION     DTVW01001089.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2448)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2448)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2448
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2334187"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..247
                     /locus_tag="EYO87_14345"
     CDS             <1..247
                     /locus_tag="EYO87_14345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010396598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="sugar ABC transporter ATP-binding protein"
                     /protein_id="HIC67150.1"
                     /translation="IDEPTRGIDVGTKAQIYAFIRDLATQGRSLIVISSEMTEVIGLA
                     DRVLVMREGRIAGEVTGNDMTEDRIVRLAMGVRGEAA"
     gene            244..1212
                     /locus_tag="EYO87_14350"
     CDS             244..1212
                     /locus_tag="EYO87_14350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010396600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HIC67151.1"
                     /translation="MKPDLHTLGPLIALIALVILGALLNPAFLAPANITNVLARSAFI
                     GMIAVGMTFVITAGGLDLSVGSMAAFLAGIAIIAMNAALPGLGENWGTIIIGMGVAIL
                     GGIAAGYLNGALITKARIEPFIVTLGTMGIFRSLVTWLADGGTLSLDYGLRTLYRPVY
                     YGGIGWITWPIIVFALTAMAGEWMMRHSRFGRHVEAIGSNDRVARYSAIDVNRARLLT
                     YMLLGLLVGLATVLYVPRLGSASGGTGVLWELEAIAAVIIGGTALKGGRGRVWGTVVG
                     VLILSLIDNILNLADLVSPYLNGAIQGIIIVLAVVLQREKRTADER"
     gene            1231..2196
                     /locus_tag="EYO87_14355"
     CDS             1231..2196
                     /locus_tag="EYO87_14355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_354330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HIC67152.1"
                     /translation="MKRRSLMKSAAIVAVLGLAGGAAVAQQDGEKTIIGVSIPSATHG
                     FMGGLNWHAQDTIDRLGKVYPNLEFVLSTAGDAAKQVSDIEDMMATRNIDALIVLPFE
                     SEPLTAPVAAVKKAGKFVTVVDRGLSQEGIEDLYVAGDNTAFGRVAGEYFNENLQPGA
                     KIVVLRGIPTTLDNERVEAFQTALEGSDIEILDMQHGNWNRDDAFTVMQDYLSKYPQI
                     DAVWAADDDMAIGVMEAIAAADRTDEMWVIGGAGMKEIVKRIMEGDPQLPVDVTYPPA
                     LISSAIEMTALNFVSGAPMVGRFIIGSQLITPENAEQFYFPDSPF"
     gene            complement(2266..>2448)
                     /locus_tag="EYO87_14360"
     CDS             complement(2266..>2448)
                     /locus_tag="EYO87_14360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008873056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyketide cyclase"
                     /protein_id="HIC67153.1"
                     /translation="PAQFSRVTFDIEQQDRMVRLTVTHEDLQPGSGMLKGITEGWPLV
                     LSSMKSLLETGQGMDL"
BASE COUNT          432 a          789 c          799 g          428 t
ORIGIN      
        1 catcgacgaa ccgacgcgcg gcatcgacgt gggcaccaag gcgcagatct atgccttcat
       61 ccgcgatctg gcgacgcagg gtcgcagcct gatcgtcatc agcagcgaaa tgaccgaggt
      121 gatcggcctg gccgaccgcg tcctggtcat gcgcgagggc cgcatcgccg gcgaggtcac
      181 gggaaacgac atgacggaag acaggatcgt gcgccttgcc atgggcgtca ggggcgaggc
      241 cgcatgaaac ccgatctgca taccctcggc ccgctgatcg cgctgattgc gctggtcatt
      301 ctgggcgctt tgctgaaccc ggccttcctg gcgccggcca acatcaccaa cgtgctggcc
      361 cgttccgcct ttatcggcat gatcgcggtc ggcatgacct tcgtcatcac cgcgggcggg
      421 ctggatctgt cggtcggctc gatggccgcg tttctggccg gcatcgccat catcgcgatg
      481 aacgccgccc tgcccggcct gggcgagaac tggggcacga tcatcatcgg catgggcgtt
      541 gccatccttg gcgggatcgc cgcgggatac ctgaacggcg cgctgatcac caaggcaagg
      601 atcgaaccct tcatcgtcac cctgggcacg atgggcatct tccggtcgct ggtgacatgg
      661 ctggccgacg gcggcacgct cagcctggat tacgggctgc gcaccctcta tcgcccggtc
      721 tattacggcg gcatcggctg gatcacctgg ccgatcatcg tcttcgcgct gaccgccatg
      781 gcgggcgaat ggatgatgcg ccattcccgc ttcggtcgcc atgtcgaggc gatcggctcg
      841 aacgaccggg tggcgcgcta ttccgccatc gacgtgaatc gcgcgcggct gctgacctac
      901 atgcttctgg gccttctggt cgggctggcc acggttctgt acgtgccgcg cctcggctcg
      961 gcctcgggcg ggaccggcgt gttgtgggaa ctggaggcga tcgccgccgt catcatcggc
     1021 ggcaccgcgc tgaagggcgg gcggggccgc gtctggggca cggtcgtggg cgtgctgatc
     1081 ctgtcgctga tcgacaacat cctgaacctc gccgatctgg tcagccccta tctgaacggc
     1141 gccatccagg gaatcatcat tgtcctcgct gtcgtcttgc agcgggaaaa acgcaccgcc
     1201 gacgagcggt gatccaaggg agggaaagga atgaaacgca gaagcctgat gaaatccgcg
     1261 gccatcgtcg cggtgctggg ccttgccggc ggcgccgccg tcgcgcagca ggacggcgaa
     1321 aagaccatca tcggcgtgtc gatcccgtcg gccacccacg gcttcatggg cgggctgaac
     1381 tggcacgccc aggacacgat cgaccgactg ggcaaggtct atccgaatct tgaattcgtg
     1441 ctgtccacgg cgggcgacgc ggccaagcag gtcagcgata tcgaggacat gatggccacg
     1501 cgcaacatcg acgcgctgat cgtgctgccc ttcgaatccg aaccgctgac cgccccggtc
     1561 gccgcggtga aaaaggccgg caagttcgtc accgtcgtcg atcgcggcct gtcgcaagag
     1621 gggatcgagg atctgtatgt cgccggcgac aataccgcct tcggccgtgt cgcgggcgaa
     1681 tatttcaacg aaaaccttca gccgggcgcc aagatcgtcg tgctgcgcgg catcccgacc
     1741 acgctggaca acgagcgcgt ggaggcgttc cagacggcgc tggagggctc ggatatcgag
     1801 atcctcgaca tgcagcacgg caactggaac cgcgacgacg cctttaccgt gatgcaggat
     1861 tacctgtcga aatatcccca gatcgacgcc gtctgggcag ccgatgacga catggccatc
     1921 ggcgtgatgg aggcgatcgc cgccgccgac cggactgacg agatgtgggt gatcggcggg
     1981 gccgggatga aggaaatcgt caagcgcatc atggagggcg acccgcaact gccggtcgat
     2041 gtgacctatc cgccggcact gatttcctcg gcgatcgaga tgacggcgct gaacttcgtg
     2101 tccggcgcgc cgatggtcgg ccgcttcatc atcggcagcc agctgatcac gccggaaaac
     2161 gcggaacaat tctactttcc cgacagcccg ttctgaaagc gggccttgtg gaaaaagtgg
     2221 cagcgcccga tgccgggcgg gcgctgccac tgacgcggct tccgcctaca gatccatccc
     2281 ctgcccggtt tccagcagcg atttcatgct ggacaggacc agcggccagc cctcggtgat
     2341 ccccttcagc atcccgctgc cgggctgcaa atcctcgtgg gtgacggtca gcctgaccat
     2401 ccggtcctgc tgctcgatgt caaaggtcac acgactgaac tgggcggg
//
LOCUS       DTVW01001090            2297 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2334480, whole
            genome shotgun sequence.
ACCESSION   DTVW01001090 DTVW01000000
VERSION     DTVW01001090.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2297)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2297)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2297
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2334480"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..153
                     /locus_tag="EYO87_14365"
     CDS             <1..153
                     /locus_tag="EYO87_14365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007427866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyketide cyclase"
                     /protein_id="HIC67154.1"
                     /translation="RLEKGLIRENWVLVDLLDMYDQIGVDVFARMREFNKARRGFDPE
                     TGRAGA"
     gene            150..914
                     /locus_tag="EYO87_14370"
     CDS             150..914
                     /locus_tag="EYO87_14370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014875637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HIC67155.1"
                     /translation="MTLPRTPSFRLDGRRALVAGASSGIGLACSVALAEAGAMVTLAA
                     RRRDKLAALADEMAAAGMSARILTLDVADVAATEAAIAQDGPFDVLVNSAGLARHGPA
                     LDTTEGDFDAVCDLNVKGAYFLTRAVASGLIAAGRPGSLINLSSQMARVGGIDRAVYC
                     ASKHAIDGFTKAMAIEWGRHRIRVNTVCPTFIRTALTESTFADPERRAWIEDKIKLGR
                     VGEVEDIMGAVVFLASDASALITGTALMVDGGWTAE"
     gene            911..1930
                     /locus_tag="EYO87_14375"
     CDS             911..1930
                     /locus_tag="EYO87_14375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015496012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HIC67156.1"
                     /translation="MTKDRATSTDVARRAGVSQSAVSRVFTPGASASAAVKAKLMKAA
                     EELGYRPNPIARAMITGESRIIGLLVAYLDNQFYPLALEKLSHALQQRGYHILVFMVP
                     QNDAGIDGVIQELMDYQVDGIITASVSMSNELTGLCQAAGIPVVLFNRGQDDARLSTV
                     TSDNMAGGRAVANFLVAGGHERIAHIAGWQHSSTGRDRTAGLVAGLKDHGREPAAIVD
                     GMYNRDTAAALARDLFGRADRPDAVFVGNDHMAFAVMDVLRYELGLSVPEDVSVVGYD
                     DVPIAAWAAYDLTTIRQPVNRMVDATVEALLSRIEGDTKPQRILIAGSLMIRGSARKP
                     RVQKT"
     gene            1927..>2297
                     /locus_tag="EYO87_14380"
     CDS             1927..>2297
                     /locus_tag="EYO87_14380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013960461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HIC67157.1"
                     /translation="MKNFNPKWKDFPDFIIGITKEIWEDRGIATLDHYYDEKMPVRSP
                     ASIVVGNRNVVAATMATLAEFPDRTLYGEDVIWCQGNDDGLLSSHRLRSTATHLRPGI
                     YGQPTGKKLVYRILADCFAQA"
BASE COUNT          390 a          705 c          802 g          400 t
ORIGIN      
        1 cggctcgaga agggcctgat ccgcgagaac tgggtattgg tggatctgct ggacatgtat
       61 gatcagatcg gcgtggacgt gttcgcccgc atgcgcgagt tcaacaaggc gcgccggggc
      121 tttgatcccg agaccggaag ggccggtgca tgacgttgcc gcgcaccccc tcgtttcgtc
      181 tggacggccg ccgcgcgctg gtcgccgggg cctcgtcggg catcggtctg gcctgctcgg
      241 tcgcgctggc cgaggcgggg gcgatggtga ccctggcggc gcgacgtcgc gacaagctgg
      301 cggcgctggc cgatgaaatg gcggcggcgg gaatgtcggc gaggatcctg acgctggatg
      361 tcgccgatgt cgccgcgacc gaggctgcga tcgcgcagga cggaccgttc gacgtgctgg
      421 tgaactcggc cggtctggcc cggcatggcc cggcactgga cacgaccgag ggcgatttcg
      481 atgctgtctg cgacctgaat gtgaagggcg cctatttcct gacccgggcg gtggcatcgg
      541 ggctgatcgc tgcgggccgg ccgggcagcc tgatcaatct ctcctcccag atggcgcggg
      601 tcggcggcat cgaccgcgcc gtctactgcg ccagcaagca cgcgattgac gggttcacca
      661 aggcgatggc gatcgaatgg ggccggcacc ggatccgggt gaacaccgtc tgtccgacct
      721 tcattcgcac cgccctgacc gaaagcacct ttgccgatcc cgaacgccgg gcctggatcg
      781 aggacaagat caagctgggc cgcgtcggcg aggtcgagga tatcatgggc gcggtggtct
      841 tcctggcctc ggacgcctcg gcgctgataa cggggaccgc gttgatggtg gacggaggct
      901 ggacggcgga atgacgaaag acagagcaac ctcgacggat gtggcccggc gcgcgggcgt
      961 cagccaatcg gcggtcagcc gggtgttcac gccgggcgcg tcggcctcgg cggcggtgaa
     1021 ggccaagttg atgaaggcgg ccgaggaact gggctatcgg cccaacccca tcgcgcgcgc
     1081 gatgattacc ggtgaaagcc ggatcatcgg gctgctggtg gcctatctgg acaaccagtt
     1141 ctatccgttg gcgctggaaa agctgtcgca cgccttgcag cagcgcggct atcacatcct
     1201 ggtcttcatg gtgccgcaga acgatgccgg catcgacggc gtgatccagg aactgatgga
     1261 ttatcaggtc gatggcatca tcaccgcatc cgtctcgatg tcgaacgagc tgaccggcct
     1321 gtgtcaggcg gccggcattc cggtggtcct gttcaaccgc ggccaggacg acgcgcgtct
     1381 gagcacggtc acctccgaca acatggcggg cgggcgcgcg gtcgccaact tccttgtcgc
     1441 tggcggacat gagcgtatcg cccatatcgc cggctggcag cattcctcga ccgggcgcga
     1501 ccgcaccgcg gggctggtcg cgggactgaa ggatcatggg cgcgaaccgg cggcgatcgt
     1561 tgacgggatg tataaccgcg acaccgcggc ggcgctggcg cgcgacctgt tcggccgcgc
     1621 cgatcgtccc gatgcggtct ttgtgggcaa cgaccacatg gcctttgccg tcatggatgt
     1681 gctgcgctac gaacttggcc tgtccgtgcc cgaggatgtt tccgtcgtgg gatacgacga
     1741 tgtgcccatc gcggcctggg cggcctatga cctgacgacg atccgacagc ccgtcaatcg
     1801 catggtcgac gccacggtcg aggcgctgct gtcgcgcatc gagggcgata ccaaaccgca
     1861 aagaattctg attgccgggt cgctgatgat ccgtggctcg gcgcgcaaac ccagggtgca
     1921 gaagacatga agaacttcaa tccgaaatgg aaggatttcc cggacttcat catcgggatc
     1981 acgaaggaga tctgggaaga tcgcggaatc gcgaccctgg atcactatta cgacgagaag
     2041 atgccggtgc gttcgccggc ctcgatcgtg gtcggcaaca ggaacgtggt cgcggcgacg
     2101 atggcgaccc ttgccgagtt tcccgaccgg acgctttacg gcgaggacgt gatctggtgc
     2161 cagggcaacg atgacgggct gctgtcctct caccgcctgc ggtccaccgc gacccatctg
     2221 cgtccgggca tctatggcca gccgaccggc aagaagctgg tctatcgcat tctcgccgat
     2281 tgcttcgcgc aggccga
//
LOCUS       DTVW01001091            1014 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2334597, whole
            genome shotgun sequence.
ACCESSION   DTVW01001091 DTVW01000000
VERSION     DTVW01001091.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1014)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1014)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1014
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2334597"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(197..>1014)
                     /locus_tag="EYO87_14385"
     CDS             complement(197..>1014)
                     /locus_tag="EYO87_14385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013805512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HIC67158.1"
                     /translation="GQTGPYASRPGFASVGEAMSGLRYINGYPDMPPPRFGISLGDTL
                     TALFAFEGMMMALFRRDRNGGQGQVVDAAITESCFAMLESCVTEFSKTGHVRKPSGSG
                     LAKIAPSNIYPTSDAGYVVIAANVDAMFRRLTRAMDRPELASDPKYATHIARGDNQQE
                     LDALIAEWSGALTMAELTRRLDRFDVVHGPINSIAEVVEDPHFRARGMVRDIEDDEFG
                     SITVPGVFPVLSDTPGDIAWLGPQEIGASNTKVYGGLGLSESQLDELRAEGVI"
BASE COUNT          191 a          340 c          305 g          178 t
ORIGIN      
        1 gtggcgttgc acacgacgtg gaggggtcaa atcggctgtt ttgggacgcg ggcgggatgg
       61 accatgctga ccgcctcgac atgccgcgcg ccggcatcgg caagcccggt gatcatctcg
      121 atccgctcct cgaccgaaaa tatccggtcg aggttctgca atccgtcgcg cggtcccacc
      181 tcgcacaggg tcagcatcag atcaccccct cggcgcgaag ctcgtccagc tggctttccg
      241 acagacccag accaccatag accttcgtgt tgctggcgcc gatttcctgc gggccaagcc
      301 atgcgatatc gcccggagta tcggacagga cgggaaagac acccggcacg gtgatgctgc
      361 cgaactcgtc atcctcgatg tcgcgaacca tgccccgcgc acggaaatgc ggatcctcga
      421 ccacctcggc gatcgaattg atcgggccat gcaccacgtc gaagcgatcc agccgccggg
      481 tcagttcggc catggtcagc gcgccggacc attcggcgat cagcgcgtcc agttcctgct
      541 ggttgtcgcc gcgcgcgata tgggtcgcgt atttcggatc gcttgccagt tccggacgat
      601 ccatcgcccg ggtcagccgg cggaacatcg cgtccacatt ggccgcgatg acgacatagc
      661 ccgcatcgct ggtcggatag atgttggacg gcgcgatctt ggccagcccc gaccccgagg
      721 gcttgcgaac atggccggtc ttggaaaatt ctgtcacgca gctttccagc atcgcaaagc
      781 agctttcggt gatggccgca tcgaccacct ggccctgccc gccgtttcga tcgcgacgga
      841 acagcgccat catcatgccc tcaaaggcga acagcgccgt cagcgtatca ccgagcgaga
      901 ttccgaaacg cggtggcggc atgtccggat agccattgat atagcgcaat cccgacatcg
      961 cctcgcccac cgaggcaaag ccgggccgcg aggcataggg acctgtctgc ccga
//
LOCUS       DTVW01001092            1611 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2335651, whole
            genome shotgun sequence.
ACCESSION   DTVW01001092 DTVW01000000
VERSION     DTVW01001092.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1611)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1611)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1611
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2335651"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..375
                     /locus_tag="EYO87_14390"
     CDS             <1..375
                     /locus_tag="EYO87_14390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_351752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="HIC67159.1"
                     /translation="IDFDRCIATPDMMPLVGRLGKILGPRNLMPNPKVGTVTMDVAEA
                     VKAAKGGEVQFKAEKAGVVHAGVGKASFDAEKLAQNIRAFVDAVSKARPSGAKGTYMK
                     KVSISSTMGPGVSIDVVSATQA"
     gene            840..1355
                     /locus_tag="EYO87_14395"
     CDS             840..1355
                     /locus_tag="EYO87_14395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005980659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="HIC67160.1"
                     /translation="MDRAQKEQVVEELGQIFESSGVVVVAHYEGMTVAQMQDLRARMS
                     DAGGAVRVAKNRLAKIALEGKPCASIADYLTGMTVLSFSEDPVAAAKVCEDYAKGNDK
                     FVILGGAMGDTALDPAGVKAVAAMPSRDELIASIVSCIGAPAANIAGAIGAPASNIAG
                     ILSTLEEREAA"
     gene            1423..>1611
                     /locus_tag="EYO87_14400"
     CDS             1423..>1611
                     /locus_tag="EYO87_14400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011570077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12"
                     /protein_id="HIC67161.1"
                     /translation="MADLKKLAEEIVGLTLLEAQELKTILKDEYGIEPAAGGAVMMAG
                     PAAGGAAEAVEEKTEFDVV"
BASE COUNT          331 a          473 c          531 g          276 t
ORIGIN      
        1 atcgactttg atcggtgcat cgcgacgccg gacatgatgc cgctggtcgg ccgtctgggc
       61 aagattctgg ggccgcgcaa cctgatgccg aaccccaagg tcggcacggt cacgatggat
      121 gtcgccgaag ccgtcaaggc ggccaagggc ggtgaggtcc agttcaaggc cgaaaaggcg
      181 ggcgtcgttc acgccggcgt cggcaaggcg tccttcgatg ccgagaagct cgcccagaac
      241 atccgcgcct tcgtggacgc ggtgagcaag gcgcggccca gcggcgccaa gggcacctat
      301 atgaagaagg tctcgatcag ttccaccatg ggcccgggcg tgtcgatcga cgtcgtctcc
      361 gcgacgcagg cgtaactcag ccttgacgat gatgatgacg gggcgggcct gcggacccgc
      421 cccgtcttat ttcagcaaaa caggcttggc gaccgtggaa gcgcccgaaa ggtcgaatca
      481 aggcaagatc ctggccgcac cgccatgtgc gggatgatcg ccggatggag gtccggattc
      541 gtccgaaggc cgcaaatgat ggcccaagtc gcgatcaggt caagatagcc cttcacatcc
      601 cgaaccaaag gcactaagga gacggcctga tccgcgcgca gatgtcagtc tgcgcgtgta
      661 tcgattcgtc cgagacggcg ggtgctggct tgccagctta atatcctgcc tgagatgggt
      721 agaagcattt ttccgaaggt tcggccttcg ggtgatcttg ccctagcgga ctcgacctgc
      781 cccggaccgg ggcgggaaac gtgagagccg gggggaaacc cccaacttgg agtgaaaccg
      841 tggatagagc gcaaaaagaa caggtggtcg aggaactcgg ccagatcttt gaaagctctg
      901 gcgtcgtcgt ggttgcccac tacgaaggga tgacggttgc acagatgcag gacctccgcg
      961 cgcgcatgag cgatgcgggt ggtgccgttc gcgttgccaa gaacaggctc gccaagatcg
     1021 ccctcgaggg taagccttgc gcaagcatcg ccgattacct gacgggcatg accgtgttgt
     1081 ccttctcgga agaccctgtg gctgcggcca aggtctgcga ggactatgcc aaggggaacg
     1141 acaagttcgt gatcctcggc ggtgccatgg gcgacacggc tctggatccg gccggtgtca
     1201 aagccgtggc cgccatgccg tcgcgcgacg agcttatcgc ttcgatcgtg tcctgcattg
     1261 gcgcccccgc tgcgaacatt gccggtgcca ttggcgcccc tgcttcgaac atcgcgggca
     1321 tcctcagcac tctggaagag cgcgaggctg cgtgacgcaa cccgattccc ggcgtgtgct
     1381 tgaaagcgcg acgttggaac actaactgga aagaacggaa aaatggctga tctgaaaaaa
     1441 cttgccgaag aaatcgtggg cctgaccctg ctggaagccc aggagctgaa aaccatcctg
     1501 aaagacgaat acggcatcga gccggccgcc ggtggcgccg tcatgatggc cggtccggct
     1561 gccggtggcg ccgccgaggc cgtcgaggaa aagaccgaat tcgacgtcgt c
//
LOCUS       DTVW01001093            2946 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2336286, whole
            genome shotgun sequence.
ACCESSION   DTVW01001093 DTVW01000000
VERSION     DTVW01001093.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2946)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2946)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2946
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2336286"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..285)
                     /locus_tag="EYO87_14405"
     CDS             complement(<1..285)
                     /locus_tag="EYO87_14405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="proline/glycine betaine ABC transporter
                     permease"
                     /protein_id="HIC67162.1"
                     /translation="MDFVTFPSMSRGDLRAMRIAIDGAFRDFTRAYGETLEQLFQPIQ
                     VLLIFIENLLIDSPWILVLAAIGGLVWGLSRSWKIVGGTVVALLLIGFFGM"
     gene            complement(360..1355)
                     /locus_tag="EYO87_14410"
     CDS             complement(360..1355)
                     /locus_tag="EYO87_14410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013651721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HIC67163.1"
                     /translation="MTLLKTTLAVTGLLLAAPAAFAAEDCGEVTIAEMNWASAGLAAW
                     VDKVILEEGYGCDVALVTGDTVPTFTSMNEKGEPDVAPELWVNAVKVPLEAAQKEGRI
                     VIASEILKDGGIEGFWVPTKLAEENDIKTIEDAMARPDLFPGAEDSSKGAFFNCPSGW
                     ACQIITANQFRALKGEEKGFELVDSGSAAGLDGSIARAFNQDQGWLGYYWAPTAILGK
                     YDMTKLDLGVEHDREEWDNCTVVNNCPEPKLNEWPRSEVFTAVTKEFADSNAVTMDYL
                     GKRAWSNDTVNELLAWMGDNQATNEDGAFYFLENYPQVWSEWVSEDIAQKVKDAL"
     gene            1774..2508
                     /locus_tag="EYO87_14415"
     CDS             1774..2508
                     /locus_tag="EYO87_14415"
                     /inference="COORDINATES: protein motif:HMM:PF13505.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin family protein"
                     /protein_id="HIC67164.1"
                     /translation="MTIIRILSLCCAGSAVAASGALAGGYVAPVAPVTDVAIIPAPVA
                     PPVADWSGAYVGGSLGYVFGSDDRVGVSDPADNLIAAPGSVDLSGATIGLHGGYRWQR
                     AMGGRQIVFGPELSVQTSKVDDEFDNGSFAARSEMKQLVALRFKTGVLNAAGNTLFYG
                     QLGAARGDFDYKVQGAGMDYDDGFKANALMAGLGVERKVTDRWSVFGEYEYRGFDKKK
                     VTDANGFTSEATPEHHSVKLGVNFSF"
BASE COUNT          488 a          970 c          947 g          541 t
ORIGIN      
        1 catgccgaaa aagccgatca gcagcagcgc gaccacggtt ccgccgacga tcttccagct
       61 gcggctcagg ccccagacaa ggccgccgat cgcggccagc acgaggatcc aggggctgtc
      121 gatcagcagg ttctcgatga agatcagcaa gacctggatc ggttggaaca gctgttccag
      181 ggtctcgcca taggcgcggg tgaaatcccg gaaggcgccg tcgatcgcga tgcgcatggc
      241 gcgcagatcg ccgcggctca ttgatgggaa agtgacgaag tccatgcggt ttttcttctt
      301 ttgcaggggt tcgggtcaag gcgaaacggg gcgcctcggc gccccgtcca tgatggcggt
      361 cagagcgcgt ccttcacctt ctgggcgata tcctcggaca cccattcgga ccagacctgc
      421 ggatagtttt ccaggaaata gaaggcgccg tcctcgttcg tggcctgatt gtcgcccatc
      481 caggccagaa gctcgttcac ggtgtcgttc gaccaggcgc gcttgcccag gtaatccatc
      541 gtgacggcat tgctgtcggc gaattccttg gtcacggcgg tgaacacttc cgaacgcggc
      601 cattcgttca gcttgggttc gggacaattg ttcacgaccg tgcaattgtc ccattcctcg
      661 cggtcatgtt ccacgcccag gtccagcttg gtcatgtcgt acttgcccag gatcgcggtc
      721 ggtgcccagt aatagcccag ccacccctgg tcctggttga aggcgcgcgc gatcgagccg
      781 tcaagcccgg cggccgaacc ggaatcgacc agctcgaacc ccttttcctc gcccttcagc
      841 gcgcggaact gattggcggt gatgatctgg caggcccagc ccgaggggca gttgaagaag
      901 gcgcccttgc tgctgtcctc ggcgccgggg aacaggtcgg ggcgcgccat cgcatcctcg
      961 atggtcttga tgtcgttttc ctcggccagc ttggtgggca cccagaagcc ttcaatgccg
     1021 ccatccttca ggatctccga cgcgatgacg atccggccct ccttctgcgc ggcctccagc
     1081 ggcaccttga ccgcgttcac ccacaattcg ggcgcgacat cgggttcgcc cttctcgttc
     1141 atcgaggtga aggtcggcac ggtatcgccg gtgaccagcg cgacgtcgca gccgtaacct
     1201 tcttccagga tgaccttgtc gacccaggcg gccagaccgg ccgaggccca gttcatttcg
     1261 gcaatcgtca cctcgccgca atcctcggcg gcaaaggcgg ccggcgcggc cagaagaagg
     1321 ccggtcacgg cgagggtggt cttcagcaat gtcatgcagg atcctttctt ttctttcgga
     1381 tttccggggc cctccctgca ggccccgccg cgcggggcgc ggcaacaaca ttcacgcacc
     1441 ataaggcaca gacccaacct tgtcacatat ttgcgacaca aatcttgtaa ataattgtta
     1501 tctatcaggt atttcagggc cgccatgggc gattcgcgac acgcccggac ccgtcgcggc
     1561 gatccgggaa tcgcccccgg tcccgggttg cggcgctgcg gtcacgcgcc ggcccggact
     1621 attgcatttt cgtcaccctc gcgatgatcg tcatgccatc acggaacggc gggattgcat
     1681 ggaaagtttg tttgacgcta cgttcgcctc caggttgccc ggcgcggtgc atccccggag
     1741 ttccccggat gccgcgcgga tcaggagtat gtcatgacga tcattcgcat cctttcgctg
     1801 tgctgcgccg gcagcgccgt cgcagcctcg ggcgcgcttg ccggcggcta tgtcgcgccg
     1861 gtcgcgcccg tcacggatgt cgccatcatc ccggcgcccg tcgcgccacc cgtcgccgac
     1921 tggtccggcg cctatgtcgg cggttcgctg ggctatgtct tcggatcgga tgatcgtgtc
     1981 ggcgtcagcg atccggccga taacctgatc gcggctcccg gttcggtcga tctgtcgggc
     2041 gcgacgatcg gcctgcatgg cggctatcgc tggcagcgcg cgatgggcgg ccgccagatc
     2101 gtcttcggcc cggaactgtc ggtgcagaca agcaaggtgg acgacgaatt cgacaatggc
     2161 agcttcgccg cccggtccga gatgaagcag cttgtcgcgc tgcggttcaa gacgggggtg
     2221 ctgaacgccg ccggaaacac gctgttctac ggccagctcg gcgcggcgcg cggcgatttc
     2281 gactacaagg tccagggcgc cggaatggat tacgacgacg gcttcaaggc gaatgccctg
     2341 atggccggcc tgggcgtcga acgcaaggtg accgaccgct ggtccgtctt tggcgaatac
     2401 gaatatcgcg gcttcgacaa gaagaaggtc acggatgcga acggatttac cagcgaagcc
     2461 acgccggaac atcattcggt caagctgggc gtgaatttca gcttctgatc cttccacgat
     2521 ccccaagggg ccggccgcct ggcgcgacgg ccctttttca tgcccggtcg tgccggggcc
     2581 gggccgggcg ccgcgcggtc cggccggccg gcagcggcag ggcgcgtgtc ccgcaggcca
     2641 cggcgatgcc ttcgggcacc agttccgtca gcgccggatc gtcgcaggcc agaccgccgg
     2701 tataggcccc gaaggcgggc aggatcaggt gatcggcgcc gatcaggaaa cagcgccgcc
     2761 gctggcccgc cagccggatg cagggatgga aatgcccgga cacgtcgggg cctgccccgg
     2821 cctgatggcg caggaccaga ccctcgcgga tctggtcgca ccccgtcccc ggcaggcgcg
     2881 cgtcgatccg gcccggatcg tgattgccgc tgacccacag ccagcgccgg cgcgcggcca
     2941 tggcgg
//
LOCUS       DTVW01001094            4571 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2339019, whole
            genome shotgun sequence.
ACCESSION   DTVW01001094 DTVW01000000
VERSION     DTVW01001094.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 4571)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4571)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4571
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2339019"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..626
                     /locus_tag="EYO87_14420"
     CDS             <1..626
                     /locus_tag="EYO87_14420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017997837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HIC67165.1"
                     /translation="NIKVALKRLRQWARHGAADELDLPATIRATANHGYIDVQTRPER
                     RNAVKVLLFLDVGGSMDDHIRIVDELFSAARSEFRQMQHFYFHNCLYEGVWRDNRRRW
                     TEQIPTWDLLHRYGRDYKCIIVGDASMSPYEIAVPGGANEHWNPESGEVWLRRLCETW
                     PDHVWLNPVPDSHWRHVQSIAMIGSIFENRMMPLTLEGLTGAMRVLG"
     gene            775..1458
                     /locus_tag="EYO87_14425"
     CDS             775..1458
                     /locus_tag="EYO87_14425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005855766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HIC67166.1"
                     /translation="MLKLTPILLLFAYMALMWFFSAWRLKQDLNQKSTPLQHPRLSPM
                     LKRLGEAMDLPPVSAHIYEIEPVNGLAAPDGRIFLTRGFIRKLDACEVTPEELASVIA
                     HELGHVSHGHARRRMIDFAGQNAIRLALTGVLGRFLPGVGAWIANMVASAVAARLSRQ
                     DEFEADRFASALMIRAGLGTDPQKSLFRKLDGLTGGTAAPAPAWFLSHPPTAQRIAAI
                     EAHEARWRS"
     gene            1514..2683
                     /locus_tag="EYO87_14430"
     CDS             1514..2683
                     /locus_tag="EYO87_14430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011750220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67167.1"
                     /translation="MTRPFRRITLYLPGFDPFPARRYREIYRRESAAQAAISGYRIRL
                     RPGAGIAGYGWHVQASFPGARIRSQVEVLPWADLVRSSMRGGVIAPYLQLARTAWIYA
                     ASGTLSRLVRLRKGPVLAILYPVGVLVLQMLSALLLAWLAAWLVGGIAGFVAGLVLAW
                     LTLLVFRRLDHLLYARYLMHDFAFAAQHRGAYAPALETRLDHFTDRLRAALTQDVDEV
                     LVVGHSSGAYLAVSVVADLLRRSPGHRPALSLLTLGHVVPMVSLLPRADRLRADLALL
                     SESPAIFWLDVSAPGDACCFGLCDPVAVSGVAGPDQRWPLVISAAFSRTLLPGTRRRL
                     RGRWFRLHFQYLHAFDRPDGYDYFAITAGPLTLAQRYGGRGHSPGRIAKPVGRRA"
     gene            2680..4023
                     /locus_tag="EYO87_14435"
     CDS             2680..4023
                     /locus_tag="EYO87_14435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020040307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HIC67168.1"
                     /translation="MIPPRPQSGDAKGTLPRLIRAFRRDLLSGLPQRLYRGWMAEYRN
                     PLIHSFFCNDPALIRLILQDRPGDFPKSDRLAEGLRPLLGDGVFITNGTQWARQRRII
                     DPAFEGGRLRQTFPAIWAAAGAMVDRLEPGETDIEPLCSHGAADVIFRALFSLPIEHH
                     VAAQVFAAFRAHQAGQPLINLAALLPLPRWMPRPHSRRTRRTADRIRTLIRDLVQARL
                     AAIAAGDPPDDLATKIMTTPDPQTGRSFDAAEMTDQVAVFFLAGHETGAAALAWALWL
                     LAAHPDWQDRVAAEGAVLGCDFSAASRLPVTRAVFREALRLYPPVPMMVRAASRPETF
                     RDRPVPPGAQLVVSPWHLHRHERLWDRPDAFDPGRWQTDAGKASARDAYLPFSAGPRA
                     CPGAGMAMLEGVVMLARITAAFRLSPGSRPPVPIARLTVRGRDGILIRLERRNGA"
BASE COUNT          657 a         1647 c         1501 g          766 t
ORIGIN      
        1 gcaatatcaa ggtggcgctg aaacggctgc ggcaatgggc ccggcacggc gccgccgatg
       61 aactggacct gcccgccacg atccgcgcca ctgccaatca cggctatatc gacgtgcaga
      121 cccggcccga acggcgcaat gccgtcaagg tgctgctgtt tctggacgtg ggcggcagca
      181 tggacgacca tatccgcatc gtggacgaat tgttctcggc cgcacggtcg gaattccgtc
      241 agatgcagca cttctatttc cacaactgcc tctacgaggg cgtctggcgc gacaatcgcc
      301 gccgctggac ggaacagatc ccgacctggg atctgctgca ccgctacggc cgcgattaca
      361 aatgcatcat cgtgggcgac gcgtcgatgt cgccctacga gatcgccgtt ccgggcggcg
      421 cgaacgaaca ctggaacccc gaatccggcg aggtctggct gcgccgtctc tgcgaaacct
      481 ggcccgatca cgtctggctg aacccggttc cagacagcca ctggcgccat gtgcaatcca
      541 tcgccatgat cggcagcatc ttcgaaaacc ggatgatgcc gctgacgctg gagggcctga
      601 caggggcgat gcgcgttctg ggatgacagg ctctcgccga ggctcgcaac ccggcgcttg
      661 atggcatggc ggatcagtcg ccgatatcac aagaccgaaa gcgcagcggc gatcttgggg
      721 tgcgcggcgc gataagtgct ggcgcgaagg gcgatcagcc cccagattgg actcatgctg
      781 aagctgacgc ccatcctgct gcttttcgcc tatatggcgc tgatgtggtt cttttccgca
      841 tggcggctga aacaggacct gaaccagaaa tccacgccgc tgcaacatcc ccgcctgtcg
      901 ccgatgctga aacgtctggg cgaggcgatg gacctgccgc cggtcagcgc ccatatctac
      961 gagatcgagc cagtgaacgg ccttgccgcg ccggacggtc gcatcttcct gacccgcggc
     1021 ttcatccgca agctggatgc ctgcgaggtc acacccgagg aactggccag tgtcatcgcg
     1081 cacgaactgg gccacgtctc gcatggtcat gcgcggcggc ggatgatcga ttttgccggc
     1141 cagaacgcga tccggctggc tctgaccggc gtgctgggac ggttcctgcc gggggttggc
     1201 gcatggatcg ccaacatggt cgccagcgcc gtcgccgccc gtctgtcgcg gcaggacgaa
     1261 ttcgaagccg accgcttcgc cagcgcgctg atgatccgcg cgggccttgg gacggaccca
     1321 cagaaatcgc tgttccgcaa gctggacggc ctcaccggcg gcacggctgc gccggcgccc
     1381 gcatggttcc tgtcccatcc gccgacggcg cagcggatcg cggcaatcga ggcgcacgag
     1441 gcgcgctggc gatcctgacg cttgccgccc cggcccgttc gcctattctg cccgggcaca
     1501 acaaggccgc agcatgactc gcccgtttcg ccgcatcacc ctgtatctgc cgggcttcga
     1561 ccccttcccc gcccgccgct accgcgagat ctatcgccgc gaaagcgccg cccaggccgc
     1621 aatctcgggc tatcggatcc ggttgcgccc tggcgccggg atcgcgggct atggctggca
     1681 tgtccaggct tcctttcccg gcgcccggat ccgttcgcag gtcgaggtgt tgccctgggc
     1741 ggatctggtc cgctcctcga tgcggggcgg cgtcatcgcg ccctatctgc aactggcgcg
     1801 gacggcgtgg atctatgcgg catcgggcac gttgtcgcgg ctggtgcggc tgcgaaaggg
     1861 cccggtcctg gccattctct acccggtcgg ggtgctggtg ctgcaaatgc tgtcggcgct
     1921 gctgctggca tggcttgccg catggctggt gggcgggatc gcgggcttcg tggcggggct
     1981 ggttctggca tggttgacgc tgctggtgtt tcgccgcctc gatcatctgc tctatgcccg
     2041 atacctgatg catgatttcg cctttgccgc gcagcatcgc ggcgcctatg cgccggcgct
     2101 ggaaacccgt ctggaccact ttaccgaccg cctccgcgcc gcgctgaccc aggacgtgga
     2161 cgaagtgctg gtcgtcggcc attcctcggg ggcttatctc gccgtgtcgg tggtggccga
     2221 cctgctgcga cgcagccccg gccatcgtcc tgccctgtcg ctgctgacac tgggccatgt
     2281 cgtgccgatg gtctcgcttc tgccgcgtgc ggaccgcctg cgcgccgatc tggcgctgct
     2341 gtcggaaagc cccgcgatct tctggctgga tgtcagcgca ccgggcgatg cgtgctgttt
     2401 cggcctctgc gacccggtcg ccgtcagcgg cgtcgcgggt ccggaccagc gatggccgct
     2461 ggtcatctcg gccgcgttca gtcgaaccct gctgcccgga acgcgccggc ggctgcgcgg
     2521 acgctggttc cggctgcatt tccagtatct ccatgccttc gaccgacccg acggatacga
     2581 ttatttcgcc atcaccgccg gtccgctgac gctggcgcag cgatatggcg ggcgcggcca
     2641 ttcgccgggc cggatcgcga aacctgtggg caggcgcgcg tgattccgcc gcgcccgcaa
     2701 tccggcgacg cgaagggcac gttgccccgc ctgatccgcg cctttcgccg cgatctgctg
     2761 tcgggcctgc cgcagcggct ctatcgcggc tggatggcgg aataccgcaa cccgctgatc
     2821 cacagcttct tctgcaacga tccggcgctg atccgcctga tccttcagga ccggcccggc
     2881 gatttcccga aatccgaccg cctggccgaa gggctgcgcc cgcttctggg cgatggcgtc
     2941 ttcatcacca acgggaccca atgggcccgc cagcgccgca tcatcgaccc ggccttcgag
     3001 ggcggccgcc tgcgccagac cttcccggcc atctgggctg cggcgggcgc gatggtggac
     3061 cggcttgaac ccggcgaaac cgatatcgag ccgctatgca gccacggcgc ggcggacgtg
     3121 atcttccgcg cgctgttttc cctgccaatc gaacatcatg ttgcggccca ggtctttgcc
     3181 gccttccgcg cccatcaggc cggacagccg ctcatcaatc tggcggcgct gctgccgctg
     3241 ccgcgctgga tgccacgccc gcattcgcgc cgcacacgcc ggaccgccga tcgcatccgg
     3301 accctgatcc gcgatctggt ccaggcacgg ctggccgcga ttgccgcggg tgatccgccc
     3361 gacgatctgg ccaccaagat catgaccacg cccgatccgc agacaggccg cagcttcgat
     3421 gccgccgaga tgacagacca ggtggcggtg ttctttctgg ccggccacga aaccggcgcg
     3481 gccgccctgg cctgggcgct gtggctgctg gccgcgcatc ccgactggca ggaccgcgtg
     3541 gcggccgaag gcgccgtgct tggttgcgat ttcagcgccg ccagccggct gcccgtgacc
     3601 cgggctgtct ttcgcgaggc gctgcgcctc tatccgcccg tgccgatgat ggtgcgcgcg
     3661 gccagccgcc ccgaaacctt ccgcgaccgc cccgtgccgc ccggcgcaca gctggtcgtc
     3721 tcgccctggc acctgcaccg ccacgaacgc ctgtgggacc ggcccgacgc gttcgatccc
     3781 ggccgctggc agaccgatgc cggcaaggcc agtgcgcgcg atgcgtatct gcccttctcg
     3841 gccggccccc gcgcctgccc cggcgcgggc atggcgatgc tggagggcgt ggtcatgctg
     3901 gcccgaatca ccgccgcctt tcggctgtcg cccggcagcc ggccgcccgt tcccatcgcc
     3961 cgattgaccg tgcgtggacg cgacggcatc ctgatccggc tggaacgtcg caacggcgca
     4021 taggtcgatc ttcggcaagg gggacggttc gaaggctgcg atggcctggg gaaaggcgcg
     4081 atcaacgcca ccagcgcccg gtcagcgcca gccgcgccag cgaggcgcgg cgctggaacg
     4141 gcgtgatctc gggcaccgcc ccgaacgggt ccacccgtcc ggcggcgatt tcggacagaa
     4201 gccgcggcac ccggacgccg ggatacagcg ccgcggtcgc gcgcttcggc accgcccgat
     4261 gcatgcgcga ggccctgcgc aacgcctctt gcgccagcac cgccaggcgc tgtgcttcct
     4321 cgggccgcgc acccgccaac cccagccgca gcggctgcaa ttgcggcagc gcgcgcaacc
     4381 aggccgccag ccccgcgcca agcgcgtgat cggccacgac ccggcgcgca ttgtcgggcg
     4441 tggccagccg tttcgcggcc agccacatca gccgccccgc cgtgtcatcg acataggcca
     4501 cgacagcctc gggcgcggaa agcggctcgc gcgcgcaatc gcggattcgc gcctcggcca
     4561 gcccggccag c
//
LOCUS       DTVW01001095            1747 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2339047, whole
            genome shotgun sequence.
ACCESSION   DTVW01001095 DTVW01000000
VERSION     DTVW01001095.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1747)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1747)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1747
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2339047"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            254..886
                     /locus_tag="EYO87_14440"
     CDS             254..886
                     /locus_tag="EYO87_14440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010400407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family protein"
                     /protein_id="HIC67169.1"
                     /translation="MPTRRHLLTACAALGAAALPAFAQDRPNPMPEELRKALERSPNA
                     PVLGNPQGDVTLTEFFDYNCPFCRKMVGTVQRLILSDPQLRVVYREWPVFGPGSEFAA
                     RASLASLSQGKYWQFHEALMKLKVRAAEPTVMRVAREVGLDEAQLRREMDAKRVSDHI
                     ALSFQLADHMGLMGTPAFVAGDEAVFGAMSLKEMRDMVARARKTLGTSAG"
     gene            complement(950..1594)
                     /locus_tag="EYO87_14445"
     CDS             complement(950..1594)
                     /locus_tag="EYO87_14445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008281673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease T"
                     /protein_id="HIC67170.1"
                     /translation="MKRLSALLAAMLWASLVVPAAAQDRAGRFDYYVLSLGWSPSWCR
                     ATGDSRDAGQCDAGGKTDFIVHGLWPQYERGWPQDCASDDRDPSRRDSQAMADLMGSG
                     GLAWYQWKKHGRCSGLSAAGYFAATREAATRARIPGVFDGLSRDITLPPSVIEDAFIE
                     ANPALTRDGITVTCRSEALQEVRICLTRDLQPRDCAPDARRDCSRRSVLMEKVR"
BASE COUNT          310 a          588 c          572 g          277 t
ORIGIN      
        1 cttgcgcgac agcaggcagg gccagcagcg cggcaatggc ggcggaaacg gtcagacggg
       61 gcatggcggt tcctgtccag ttgggatgta tccggacaga atgcggccga atcacccatt
      121 ttccaaagga aacccgccgg catcggcggc agatcgcatg tccgacccca ccgaaacgtg
      181 actgttcccg catccgacgg ccttctatcc ctgtccgggt gcgacatccg atgacgaccc
      241 gaaaggaacg cccatgccga cccgccgcca tttgctgacc gcctgtgccg cgctcggtgc
      301 cgccgcgctg ccggccttcg cgcaggaccg gcccaacccg atgcccgagg aactgcgcaa
      361 ggcgctggaa cgctcgccca atgctccggt tctgggcaat ccgcagggcg atgtcacgct
      421 gaccgagttc ttcgactaca attgtccctt ctgccggaag atggtcggca cggtgcaaag
      481 gctgatcctg tccgatccgc agcttcgcgt cgtctatcgc gaatggccgg tcttcgggcc
      541 cggcagcgaa tttgcggccc gcgcctcgct ggcctcgctg agccagggaa aatactggca
      601 gttccatgag gcgctgatga aattgaaggt gcgcgcggcc gaaccgacgg tgatgcgcgt
      661 cgcccgtgag gtcggactgg atgaggcgca attgcgccgc gagatggacg ccaagcgtgt
      721 cagtgaccac atcgccctgt ccttccagct tgccgatcat atgggcctga tggggacgcc
      781 cgccttcgtc gccggagacg aggccgtctt cggcgcgatg agcctgaagg aaatgcgtga
      841 tatggtcgcc cgagcccgca agacgctggg cacctcggcg ggctgaaggg atcttcgacg
      901 gcgctttcgg ttcggtggcc gcatcccggg gccgggcggg gccgtcggtt cagcgcacct
      961 tttccatcag gaccgaacgc cgcgaacaat cgcgccgcgc atcgggcgcg cagtcgcgtg
     1021 gctgaagatc gcgggtcagg cagatgcgga cctcctgcag ggcctcggac cggcaggtga
     1081 cggtgatgcc gtcgcgggtc agcgccggat tggcctcgat gaaggcatcc tcgatgaccg
     1141 agggcggcag cgtgatgtcg cgggacaggc cgtcgaacac accggggatg cgcgcgcgcg
     1201 tcgccgcctc gcgggtggcc gcgaagtagc cggccgccga cagccccgaa cagcggccat
     1261 gtttcttcca ctgataccag gccagtccgc ccgagcccat cagatccgcc atcgcctgac
     1321 tgtcccgccg cgacgggtcg cgatcgtccg aggcgcaatc ctgcggccag ccgcgttcat
     1381 attgcggcca gagcccatgg acgatgaaat cggtcttgcc gccggcgtcg cattgcccgg
     1441 catcgcggga atcccccgtc gcacggcacc aggagggcga ccagccaagc gacaggacgt
     1501 aataatcgaa ccggccggcg cggtcctggg cggcggccgg cactacaagg cttgcccaaa
     1561 gcatcgcggc aagaagggcg gacaggcgtt tcatggtcca agtctagccc gccaaatgcc
     1621 gccgcgcacc gagattcgtg cgattcccct tttcccgtgc cgacgaaatc gctatatcca
     1681 cccgcaattc cccccgaaaa cgaggaatgg cacccgccga aagccgtttt cccggctgat
     1741 gaaggcc
//
LOCUS       DTVW01001096            1811 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2339752, whole
            genome shotgun sequence.
ACCESSION   DTVW01001096 DTVW01000000
VERSION     DTVW01001096.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1811)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1811)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1811
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2339752"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..704)
                     /locus_tag="EYO87_14450"
     CDS             complement(<1..704)
                     /locus_tag="EYO87_14450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011747217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MOSC domain-containing protein"
                     /protein_id="HIC67171.1"
                     /translation="MSARLAHIRRHPIKSVGGEGLDKVTLQAARRLPGDREWAVVTEA
                     GERHARASESGGAPDRWLPKSCFVRGVSSAAVQAIAGGWRNGRIALSQPAQSDLSFDP
                     ETEADRLIEWLRPLWPADAPAPTRLVRGVAIWTDQKWPWLSILSLSSLSALEERIGHP
                     LGLHRWRGNLWVEGWAPFAERELIGRIIRIGATELRVTDTIARCDATSADTRTGARDL
                     DMVATQRAMVSVTRNSV"
     gene            complement(701..>1811)
                     /gene="yidC"
                     /locus_tag="EYO87_14455"
     CDS             complement(701..>1811)
                     /gene="yidC"
                     /locus_tag="EYO87_14455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HIC67172.1"
                     /translation="GTLSEIDYDDLQDTGLIEQRSTGGWLGITDKYWLAALIPDQTTT
                     TTSRFLHRIASGVDKYQVDYRGPKLVAPAGGAVETRNHLFTGAKEVLLMDGYEKAYGI
                     DRFELAIDWGWFYFLTKPIFRILHWLNAQIGNMGWSIIALTFILKLLVFPLARKSYIS
                     MAKMKELQPQMEAIKERTGDDRMKYQKEVMELYKSQKVNPAAGCLPVLLQIPIFFSLY
                     KVIFVTIEFRHAPWIGWIRDLSAPDPSSLLNLFGILPFAPPAQGTLLHSLSLPALAII
                     LGISMWMQQRLNPTPADPSQKMIFALMPWVFMFMLGGFASGLVLYWITNNTITIIQQY
                     TIMSMHGHRPDLFGNIKASIPKRPKRDSKSGSKGK"
BASE COUNT          332 a          568 c          575 g          336 t
ORIGIN      
        1 accgaattgc gggtgaccga caccattgcc cgctgcgtcg caaccatatc cagatccctc
       61 gcgccggtcc gggtatcggc gctggtggcg tcgcagcggg caatggtgtc ggtcacccgc
      121 aattcggtcg cgccgatgcg gatgatccgg ccgatcagtt cgcgctcggc aaagggggcc
      181 cagccctcga cccacagatt gccgcgccag cggtgaagac ccagcggatg gccgatcctt
      241 tcctccagcg ccgacaggct ggaaagcgac aggatcgaca gccagggcca cttctggtcg
      301 gtccagatcg cgacacccct gaccaggcgg gtcggcgccg gcgcgtcggc gggccagagc
      361 ggacgcagcc attcgatcag gcggtccgct tccgtttcgg gatcgaagct cagatcggac
      421 tgcgccggtt gcgacagcgc gatgcgacca ttccgccagc cacccgcgat ggcctgaacc
      481 gcagccgatg agacgccgcg gacaaagcag gatttcggca gccagcgatc cggcgcaccg
      541 ccgctttcgc tggcccgcgc atggcgttcg ccggcctcgg tgacgacagc ccattcgcga
      601 tcgccgggca gccggcgcgc ggcttgcagg gtcaccttgt ccagcccttc accgccgacc
      661 gacttgatcg gatgccggcg gatatgggcc agccgtgcgc tcacttgccc ttgcttccgg
      721 atttgctgtc gcgtttcgga cgtttcggga tcgaggcctt gatgttgccg aacagatcgg
      781 gacggtgccc gtgcatcgac atgatcgtgt attgctggat gatggtgatg gtgttgttgg
      841 tgatccagta cagcaccagc cccgaggcaa agccgcccag catgaacatg aagacccagg
      901 gcatcagcgc aaagatcatc ttctgcgacg ggtcggccgg ggtcgggttc agccgctgct
      961 gcatccacat gctgatcccc agaatgatcg ccagcgccgg cagcgacagc gaatgcagca
     1021 gagtgccctg tgcgggcggc gcgaagggca agatgccgaa caggttcagc aggctcgagg
     1081 ggtcgggcgc ggacaggtcg cgaatccagc cgatccaggg cgcgtgccga aattcgatgg
     1141 tgacgaagat gaccttgtag agcgagaaga agatcggaat ctgcagcaga accggaaggc
     1201 agcccgcggc ggggttcacc ttctgggact tgtaaagctc catcacttct ttctggtatt
     1261 tcatccggtc atcgccggtg cgttccttga tcgcctccat ctgtggctgc aattccttca
     1321 tcttcgccat cgagatgtag gatttgcgcg ccagcgggaa gaccagcagc ttcaggatga
     1381 aggtcagcgc aatgatcgac cagcccatgt tgccgatctg cgcgttcagc cagtgcagga
     1441 tgcggaagat cggcttggtc aggaaataga accagcccca gtcgatcgcc aattcgaatc
     1501 ggtcaatgcc ataagctttc tcgtaaccgt ccatcagcag cacttccttg gcgccggtga
     1561 acagatggtt gcgggtttcg acggcaccgc ccgcgggcgc caccagcttc ggcccccggt
     1621 aatcgacctg gtacttgtcg acgccgctgg cgatgcggtg cagaaagcgg ctggtcgtcg
     1681 tcgttgtctg gtccgggatc agcgctgcaa gccaatactt atccgtgatg ccgagccagc
     1741 cgccagttga tctctgctca atcaaccccg tatcctggag gtcgtcgtag tcgatctcgc
     1801 ttagcgtgcc g
//
LOCUS       DTVW01001097            1664 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2340239, whole
            genome shotgun sequence.
ACCESSION   DTVW01001097 DTVW01000000
VERSION     DTVW01001097.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1664)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1664)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1664
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2340239"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..420)
                     /locus_tag="EYO87_14460"
     CDS             complement(<1..420)
                     /locus_tag="EYO87_14460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009803834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HIC67173.1"
                     /translation="MAIAEDTVKTDPLRESIGMPRLHKVIFLVLLGLALLLPYGVYPV
                     FAMKVMCFALFAYAFNLLLGFGGLLSFGHAAYFGGASYVAAHAAKVWGLTPELSILAG
                     TVAAALLGLVIGALSIRRQGIYFAMVTLAFAQMVYFFA"
     gene            complement(420..1307)
                     /locus_tag="EYO87_14465"
     CDS             complement(420..1307)
                     /locus_tag="EYO87_14465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018303025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HIC67174.1"
                     /translation="MFELLGVPPQVLMGQLLLGLINGSFYAVLSLGLAVIFGLLNIIN
                     FAHGAQYMMGAFAAWMLLTYVGVGYWPALIVAPLVVGAIGIVLERLMLARLYHLDHLY
                     GLLLTFGLALIIQGLFRNYYGISGLPYQIPASLSGGYNLGFMFLPTYRGWVVVASVIV
                     CFATWFIIEKTKLGAYLRAATENPVLVGAFGINVPRMITLTYGFGVALAGFAGVLAAP
                     IYSVNPNMGADLIIVVFAVVVIGGMGSIMGAILTGYGLGLVEGLTRVFYPEGSAVVIF
                     VIMAIVLLFRPEGLFGRAG"
     gene            complement(1374..>1664)
                     /locus_tag="EYO87_14470"
     CDS             complement(1374..>1664)
                     /locus_tag="EYO87_14470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007426072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HIC67175.1"
                     /translation="GVYSGTLQYLKAVEALGSAEDGKAVAAKMKESPFDDPLFGKGSI
                     RGDGRAIHDMYLYEVKTPAESTGEWDLYKEVATISGEDAFLPMLEECDFTKQ"
BASE COUNT          382 a          525 c          508 g          249 t
ORIGIN      
        1 ggcaaagaaa tagaccatct gcgcgaaggc cagcgtcacc atggcgaaat agatcccctg
       61 ccgccggatc gacagcgcgc cgatgaccag ccccagcaaa gcggcggcca cggtgccggc
      121 aaggatcgac aattccggcg tcagtcccca gactttcgcg gcatgggcgg caacatagct
      181 tgccccgccg aaataggccg cgtgcccgaa ggacagaagt ccgccgaaac cgagaagcag
      241 gttgaacgca taggcgaaaa gcgcaaaaca catgaccttc atggcaaaga cgggatagac
      301 cccgtagggc agcagcagcg ccagccccag caggaccaga aagatcacct tgtgcagccg
      361 cggcatgccg atgctttcgc gcagggggtc agtcttgacc gtgtcttcgg cgatcgccat
      421 cagcctgccc tcccgaaaag accctcgggc cggaacagca gcacgatcgc catgatgacg
      481 aagatgacga cggcggaccc ttcgggatag aacacgcgcg tcagaccctc gacaagaccc
      541 aggccatagc cggtaaggat cgcccccatg atcgatccca tgccgccgat caccacgacg
      601 gcgaaaacca cgatgatcag gtcggcgccc atgttgggat tgaccgaata gatcggtgcg
      661 gccagcacgc cggcaaagcc cgccagtgcc acgccgaaac cgtaggtcaa tgtgatcatg
      721 cgcggcacgt tgatgccgaa ggcgccgacc agaaccgggt tctcggtggc ggcgcgcaga
      781 taggcaccaa gcttcgtctt ctcgatgatg aaccaggtgg cgaaacagac gatgaccgag
      841 gcgacgacga cccagccgcg ataggtcggc aggaacatga agccaaggtt gtagccgccc
      901 gacagcgacg cgggaatctg gtagggcagg cccgagatgc cgtaatagtt gcgaaagagc
      961 ccctggatga tcagtgcaag tccgaaggtc agaagaagcc cgtaaaggtg gtcgagatgg
     1021 tagagccgtg ccagcatcag ccgttccagg acgatgccga tggcgcccac gaccagtggc
     1081 gcgacgatca gcgccggcca gtagcccacc ccgacatagg tcagcagcat ccaggcggcg
     1141 aaggcgccca tcatgtattg ggcgccatgg gcgaaattga tgatgttgag aagcccgaat
     1201 atcaccgcca gtcccagtga caggaccgca tagaacgatc cgttgatcag ccccagaaga
     1261 agctggccca tcaagacctg cggcggcacg cccagaagtt cgaacatctc gttccgtccc
     1321 gtgattgaaa tggcgccgcg ccagaatttc tccggcgcga ccgccccgtc aggttactgc
     1381 ttggtaaagt cgcattcctc gagcatcggc aggaacgcat cctcgccgct gatcgtcgcg
     1441 acttccttgt agaggtccca ctcgccggtc gattccgcgg gggtcttgac ctcgtagaga
     1501 tacatgtcgt ggatcgcccg gccgtcgccg cggatcgagc ccttgccgaa aagcgggtcg
     1561 tcgaagggcg actccttcat cttggcggcg accgccttgc cgtcctcggc gctgcccagt
     1621 gcctcgaccg ccttgagata ttgcagcgtg ccggaataga cgcc
//
LOCUS       DTVW01001098            1646 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2340649, whole
            genome shotgun sequence.
ACCESSION   DTVW01001098 DTVW01000000
VERSION     DTVW01001098.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1646)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1646)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1646
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2340649"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..352
                     /locus_tag="EYO87_14475"
     CDS             <1..352
                     /locus_tag="EYO87_14475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015496008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HIC67176.1"
                     /translation="MADGMIPNYFAEGTEDPAIRDLCMSMARDLGPQVFVRQSLALRN
                     RPDRQDVLRQVKVPTLILCGRGDRLCPVERHRLMQSLIAGSRLEIIEDAGHLPVLERP
                     DHVNAALLRWLEET"
     gene            349..1044
                     /locus_tag="EYO87_14480"
     CDS             349..1044
                     /locus_tag="EYO87_14480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008562047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RraA family protein"
                     /protein_id="HIC67177.1"
                     /translation="MKESLLKRLRAVDTPTVCNAIEVAQGQRGFNAFTRGTVLCSDPA
                     GGAIVGFARTARIAACRPSDEAPEVVRGRRMAYYRYMSEAPRPGIAVIEDLDGENAIG
                     AYWGEINTEVHKGFGMAGALTNGVMRDLGDLPADFPVVAGSVGPSHGFVHVRDFDEPV
                     TVFGLTIHPGDLVHADRHGAVVIPAGVIGRLEAAIDKLMATERIVLDAARAPGFDFDR
                     FERAWSEFEAART"
     gene            complement(1120..>1646)
                     /locus_tag="EYO87_14485"
     CDS             complement(1120..>1646)
                     /locus_tag="EYO87_14485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009827446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="cupin"
                     /protein_id="HIC67178.1"
                     /translation="APQVIEDARDHGLVLGQNGKLYDSKKGQNLPDGVQPMPLLTDDE
                     LARFPEPTTAEVVPGYVARYWDLVALADKSPAKVIGERGILKDKPGFEVDFITHGSAD
                     GGKHQHDKPSVLMPVRGHWRVDYDGGSAILAPGDTMSIPQNMPNSAVPSMTGEAALYR
                     VIATGEAAGATWKE"
BASE COUNT          281 a          511 c          550 g          304 t
ORIGIN      
        1 gatggcagac gggatgattc cgaactattt cgccgaaggg accgaggatc cggcgatccg
       61 cgacctttgc atgtcgatgg cccgggatct ggggccgcag gtgtttgtcc ggcaatcgct
      121 ggccctgcgc aaccgtcccg accgccagga cgtgctgagg caggtgaagg tgccgacact
      181 gatcctgtgc gggcggggcg accgattgtg cccggtggaa aggcacaggt tgatgcaaag
      241 cctgatcgcc gggtcgcggc tggagatcat cgaggatgcc ggccatctgc cggtgctgga
      301 aagaccggat cacgtgaatg cggcgctgct gcgctggctg gaggaaacat gaaggaatca
      361 ttgctgaaac gtttgcgggc ggtcgatacg ccgaccgtct gcaatgcgat cgaagtcgcg
      421 cagggccagc gggggttcaa cgcttttacc cgcggaacgg tgctgtgttc ggatccggct
      481 gggggggcaa tcgtgggctt tgctcgcacc gcccgcatcg ccgcctgtcg gccgtcggac
      541 gaggcgcccg aagtggtccg tggtcggcgc atggcctatt accgctacat gtccgaggca
      601 ccccgccccg gtattgccgt gatcgaggat ctcgacggcg aaaacgcgat cggagcctat
      661 tggggcgaga tcaacaccga ggtgcacaag ggattcggca tggcaggcgc gctgaccaat
      721 ggcgtgatgc gtgatctggg cgacttgcca gcggactttc cggtggttgc gggatcggtc
      781 gggccgagcc acggtttcgt ccatgtccgc gatttcgatg aacccgtgac agtgttcggg
      841 ctgacaatcc atcccggcga tctggtccat gcggaccgcc atggcgccgt cgtgatcccg
      901 gccggggtca tcggccggct tgaggccgcg atcgacaagc tgatggcgac cgagcggatc
      961 gttctggacg ctgcgcgagc accaggattc gactttgacc gcttcgagag ggcgtggagc
     1021 gaattcgaag ccgcccggac ctgaaaaccc gtccgtccgg cgaaccggaa acggcgggcc
     1081 attggcccgc cgccggcatc gcggaacgac atcctgcgat cattccttcc aggtcgctcc
     1141 agccgcctca cccgttgcga tcacgcgata cagcgccgcc tcgccggtca tcgagggcac
     1201 cgcggaattg ggcatgttct ggggaatgct catcgtgtcg cccggtgcca gaatggcgga
     1261 acctccatca taatcgaccc gccaatgtcc gcgcaccggc atgaggacgg agggcttgtc
     1321 atgctgatgt tttccgccat cggccgagcc atgggtgatg aaatcaacct cgaagcccgg
     1381 cttgtccttc aggatgcccc gttcaccgat caccttcgcg ggtgacttgt cggccagtgc
     1441 caccagatcc cagtagcgcg cgacatagcc cggaaccacc tcggcggtcg tgggttcggg
     1501 gaaccttgcc agctcgtcat ccgtcagcag cggcatgggc tggacgccat cgggaaggtt
     1561 ctggcccttc ttgctgtcgt atagcttgcc gttctgcccc aggaccagcc cgtgatccct
     1621 ggcatcctcg atcacctgcg gcgccc
//
LOCUS       DTVW01001099            1142 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2341664, whole
            genome shotgun sequence.
ACCESSION   DTVW01001099 DTVW01000000
VERSION     DTVW01001099.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1142)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1142)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1142
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2341664"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..904
                     /locus_tag="EYO87_14490"
     CDS             <1..904
                     /locus_tag="EYO87_14490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="class I SAM-dependent rRNA methyltransferase"
                     /protein_id="HIC67179.1"
                     /translation="YDAPFYRLVHAEADGLPGLVIDRFGDVAVMQPNAAWADRMAGEI
                     AGALVEATDVATVILNGQGRSRGLEGLTERTEVVLGPAPDAPVPVVMNGATYMADLMG
                     GQKTGLFYDQRPNHAFTQSLAAGLSVLDVFSHVGGFALAALAAGATGAVCVDGSAPAL
                     DLAAGGAAAMGMADRLETRQSDAFKAMEAMAEEGRHFDLVICDPPAFAPSKPALEAGL
                     RAYERVAKLAAPLVAPGGYLVLCSCSHAADLTAFRNVSARGIGRGGRRGVLIHVGQAG
                     PDHPVLPQLAETGYLKALFFRLDG"
     gene            904..>1142
                     /locus_tag="EYO87_14495"
     CDS             904..>1142
                     /locus_tag="EYO87_14495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PIN domain-containing protein"
                     /protein_id="HIC67180.1"
                     /translation="MRAVLDANILFPTILREILADLGAAGLYDPVWSARILEEWRRAA
                     ARLGSDQEVVAGAEIALLTDRFPDAIAADDGVRTI"
BASE COUNT          158 a          359 c          424 g          201 t
ORIGIN      
        1 ctacgatgcg ccgttctatc ggttggtcca tgcggaagcg gatggtctgc cggggctggt
       61 catcgaccgg ttcggagatg tcgcggtgat gcagcccaac gccgcctggg cggaccgaat
      121 ggccggcgag atcgccgggg cgctggtcga ggcgacagac gtcgcgaccg tgatcctgaa
      181 cggtcagggg cggtcgcgag ggctggaggg tctgaccgag cggaccgagg tcgtgctggg
      241 cccggccccc gacgcgccgg ttccggtggt gatgaacggc gcaacctaca tggccgatct
      301 gatgggtggc cagaagacgg gcctgttcta cgatcagcgc cccaaccatg ccttcacgca
      361 aagtcttgcc gccggactgt cggtgctgga tgtgttcagc catgtcggcg gtttcgcgct
      421 ggccgcgctg gctgccgggg cgaccggcgc cgtctgcgtt gacggctcgg cgccggcgct
      481 ggatctggcg gctggcgggg ctgcggcgat ggggatggcc gaccgtctgg aaacacgcca
      541 atccgacgcg ttcaaggcga tggaggcgat ggccgaggag ggccggcatt tcgatctggt
      601 catctgcgat ccgcccgcct tcgcgccctc gaaaccggcg cttgaggcgg gtttgcgcgc
      661 ctatgagcgg gtggcgaagc tggccgcgcc cctggtcgcg ccgggcggtt atctggtcct
      721 gtgctcgtgc agccatgccg ccgacctgac cgcctttcgc aatgtcagcg cgcgcggtat
      781 cgggcggggc ggccggcgcg gcgttctgat ccatgtcgga caggccgggc cggatcatcc
      841 ggttctgccg caactggccg agaccggcta tctgaaagcc ctgttcttcc ggctggacgg
      901 ctgatgcggg cagtcctgga cgccaacatc ctgtttccca cgatcctgcg agagatcctg
      961 gccgatctgg gcgcggccgg actttatgat ccggtttggt cggcacgcat ccttgaggaa
     1021 tggcgccgcg ccgccgcccg gctgggatcc gatcaggaag tcgtggcagg ggccgagatc
     1081 gccctgctga cggaccgatt ccccgatgcg atcgcagccg atgacggcgt gcggacgatc
     1141 ga
//
LOCUS       DTVW01001100            1465 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2342557, whole
            genome shotgun sequence.
ACCESSION   DTVW01001100 DTVW01000000
VERSION     DTVW01001100.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1465)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1465)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1465
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2342557"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..490)
                     /locus_tag="EYO87_14500"
     CDS             complement(<1..490)
                     /locus_tag="EYO87_14500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009814261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase Y family protein"
                     /protein_id="HIC67181.1"
                     /translation="MFDGIRKRVVCMWFPRLASDRALRARPVEAPFALIVSRNNAERL
                     ACVNVAAESRGLWPGMNLADARAFCPDLVTRTGDPQGDRAFLVALRRWATRYCPWVGL
                     DGTDGLVLDITGAAHLWGGEAAMLADMRARAARAGLTLRLGAGDTRGAAWALARHGEG
                     IAP"
     gene            complement(405..992)
                     /locus_tag="EYO87_14505"
     CDS             complement(405..992)
                     /locus_tag="EYO87_14505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008885509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67182.1"
                     /translation="MRPDFDDCFPLRVARVHEVCGAGATAFAAIAAAPAQGPVLWLRE
                     AWRGDMLNPLGLAPFIDPSRLLVARSANQTDSLAAAEEALRDGAIPFVVAQITRPLNL
                     REGRRLQLAAGAGGTTGLCIIPENMGSNAAETRWRAVPILDDGRGDSTLMQWEIIKNK
                     SGTIGAWHVRWDPEARGLHVVSPAGERPGPAGTPG"
     gene            complement(1035..1412)
                     /locus_tag="EYO87_14510"
     CDS             complement(1035..1412)
                     /locus_tag="EYO87_14510"
                     /inference="COORDINATES: protein motif:HMM:PF07729.10"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FCD domain-containing protein"
                     /protein_id="HIC67183.1"
                     /translation="MLAVPLLSPAERWVLSQVSVFEGGFTLDAAEVLLAEGLPDRLRR
                     EFFPRLVCNALFLEVYDLIRQMRREAGWRERREETNVPGFLRLLGQQHQHIFDAIAAG
                     DAAGAGQAQRDHLDFVASAIDSD"
BASE COUNT          260 a          516 c          485 g          204 t
ORIGIN      
        1 cgggcgcgat cccctcgcca tgccgggcca gcgcccatgc cgcgccgcgc gtgtcgcccg
       61 cgccgaggcg cagcgtcagc ccggcccggg cggcgcgggc gcgcatgtcg gccagcatcg
      121 ccgcctcgcc gccccacaga tgcgccgcgc cggtgatgtc cagaaccaat ccgtcagtcc
      181 cgtccagccc gacccagggg caatagcgcg tggcccagcg gcgcagggcg accaggaatg
      241 cccgatcgcc ctggggatcg ccggtccggg tgaccagatc gggacagaag gcacgggcat
      301 cggcaaggtt catgccgggc cacagaccac ggctttcggc cgcgacgttc acgcaggcca
      361 gacgctcggc attgttccgg ctcacaatca gcgcgaaggg cgcctcaacc gggcgtgccc
      421 gcagggcccg gtcgctcgcc agccggggaa accacatgca gaccacgcgc ttccggatcc
      481 catcgaacat gccaggcccc gattgttcct gatttgttct tgataatttc ccattgcatc
      541 agagtcgagt ccccccgccc gtcatccagg atcgggaccg cccgccagcg cgtctcggcg
      601 gcattgctgc ccatgttttc ggggatgatg cacaggccgg tcgtgccccc cgccccggca
      661 gccagttgca gtcgccgccc ttcgcgcagg ttcagcgggc gggtgatctg ggccaccacg
      721 aagggaatgg cgccgtcacg caaggcctct tcggcggccg caaggctgtc ggtctggttc
      781 gcgctgcgcg ccaccagcag acgcgacgga tcgatgaacg gcgcaagtcc cagcggattg
      841 agcatgtcgc cgcgccatgc ctcgcgcagc cacaggaccg gaccttgcgc cggggcggcg
      901 gcgatggcgg caaaggccgt cgcgccggcc ccgcaaacct catggacgcg cgcgacgcgc
      961 agcggaaaac aatcatcgaa atcgggtcgc atcgccccga agctaggcaa gccgacagat
     1021 ctgtcaagcc ggtctcaatc gctgtcgatg gcgctggcga cgaaatcgag atggtcccgc
     1081 tgcgcctgac ccgcgcccgc tgcgtcgcca gcggcgatgg cgtcgaagat atgctgatgc
     1141 tgctggccca gaagcctcag gaaaccgggc acgttggttt cctctctgcg ttcgcgccag
     1201 ccggcctcgc gccgcatctg ccggatcaga tcatagactt ccagaaacag cgcattgcag
     1261 acgagacggg ggaagaactc tctccgaagg cggtctggga ggccttcggc caagaggacc
     1321 tcggccgcat ccagggtgaa gccaccctca aacaccgaga cctgggagag cacccaccgc
     1381 tcggctgggg agaggagggg caccgccaac atgggtcaga agtgcggtga gtggattgag
     1441 gacggcaaga ccgtgaccta cgacc
//
LOCUS       DTVW01001101            1937 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2342592, whole
            genome shotgun sequence.
ACCESSION   DTVW01001101 DTVW01000000
VERSION     DTVW01001101.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1937)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1937)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1937
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2342592"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..700
                     /locus_tag="EYO87_14515"
     CDS             <1..700
                     /locus_tag="EYO87_14515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009803584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phenylacetate--CoA ligase family protein"
                     /protein_id="HIC67184.1"
                     /translation="AFFLTLADKGIETYGRDAWKVKTAFLGGEMGDWMAKRRRIEAEY
                     GVSTWAAYATADLGLVAYEDGGEGYLVHPDRVVQICDPVSGEQVAHGEPGEVVVTARD
                     ATWPMIRFGTGDSAFALESNADGTVSRISALQGRVGAAVKVREIFVYPRVVEEVVIGT
                     PGAKAAQAVVTRENDRDMIRLSLVLEDGADASAAEAAAAKNFKLHTRIRVDEVNIVSE
                     LPENAELIVNQKDR"
     gene            complement(772..1737)
                     /locus_tag="EYO87_14520"
     CDS             complement(772..1737)
                     /locus_tag="EYO87_14520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009504565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HIC67185.1"
                     /translation="MYSDTPLGRLRLPLICSPMFLVSGPDLVVAQCKAGVIGSFPALN
                     ARESEGEPPLLEAWLKRITEELDAHNQANPDRPAAPFAVNQIVHRSNDRIERDVEICA
                     RWKVPVWITSMGAREDVNQAAHECGGTVLHDVINNKYARKAIDKGADGLIAVCAGAGG
                     HAGALSPFALVQEIREWFDGPLALSGSIATGRSILAAQAMGADFGYIGSPFIAMTEAV
                     ASEEYKQMIVEGGADDIVYTDYFSGVHANYLKPSVRAVGLDPDNLAGIGNKLDLATGD
                     IRPKAWRDIWGSGQGIGAVKEVMTTADYVDRLDREYQVAKDALCS"
BASE COUNT          385 a          585 c          598 g          369 t
ORIGIN      
        1 cgcgtttttc ctgacgctgg cggacaaggg gatcgaaacc tatggccgcg acgcatggaa
       61 ggtgaagaca gccttcctcg gcggtgagat gggcgactgg atggccaagc gccgccggat
      121 cgaggccgaa tacggcgtgt ccacctgggc cgcctatgcc accgccgatc taggccttgt
      181 cgcctatgag gatggcggcg aaggctatct ggttcatccc gaccgcgtgg tgcagatctg
      241 cgatccggtc agcggcgaac aggtcgccca tggcgaaccg ggcgaggttg tcgtgaccgc
      301 gcgcgatgcc acctggccga tgatccggtt cggcaccggc gacagcgcct ttgccctgga
      361 aagcaacgcg gatggcaccg tcagccggat ttcagcattg cagggacggg tcggggcagc
      421 ggtcaaagtg cgcgagattt tcgtttatcc gcgcgtggtt gaagaagttg tcatcggcac
      481 gccgggcgca aaggccgcgc aggccgtggt aacgcgcgag aacgatcgcg acatgatccg
      541 cctctcgctt gtgctggaag acggtgccga cgcttctgct gcggaagcag ccgccgccaa
      601 aaacttcaaa ctgcatacac gaattcgtgt cgacgaagtg aacattgttt cggaactacc
      661 cgaaaatgca gaactgatcg tcaaccaaaa ggaccgctaa gatcgggtct cgatcattcg
      721 cgacaaccgc agaaacagat gggcggccgg gcaaccggcc gccctctttc gtcaggaaca
      781 gagcgcatct ttggcgacct ggtattcccg gtcgagacgg tcgacgtagt ccgccgtggt
      841 catcacctct ttcaccgctc cgatcccctg accgctgccc cagatgtcac gccaggcctt
      901 ggggcgaatg tcgccggtgg ccagatcgag tttgttgccg atcccggcca ggttgtccgg
      961 atcgagaccg accgcccgca ccgacggttt cagatagttg gcatgcacgc cgctgaaata
     1021 gtcggtatag acaatatcat cggccccgcc ttcgacgatc atttgcttgt actcctccga
     1081 cgcgaccgcc tcggtcatgg caatgaaggg ggatccgata tacccaaaat ccgcacccat
     1141 ggcctgcgcc gccagaattg agcgcccggt cgcgatggac ccggacaggg caagcggacc
     1201 atcgaaccat tcccggattt cctgaaccag cgcaaagggt gacaaggccc cggcgtggcc
     1261 gccagcgccg gcgcagaccg cgatcaggcc gtcggcgccc ttgtcgatcg ctttcctggc
     1321 gtatttgttg ttgattacat cgtgcagtac agtgccgccg cactcatgtg ccgcctggtt
     1381 gacgtcttcc cgtgcgccca ttgatgtgat ccagacaggc actttccagc gcgcacatat
     1441 ttcgacgtcc cgctcaatcc gatcattcga tcgatggacg atctggttga ccgcgaatgg
     1501 cgcggcgggc cgatcgggat tggcctgatt gtgcgcgtca agctcttcag tgatgcgctt
     1561 gagccaggct tcaagcagcg gcggttcacc ttcggactcg cgtgcgttca gcgccggaaa
     1621 gctgccgatg acgccggctt tgcactgggc gacgacaaga tccggcccgg acaccaggaa
     1681 catgggcgag cagatcaagg gcaggcgcaa gcggccgaga ggggtgtcgg agtacattgt
     1741 ctatttcttc tttgctgttt caacaggggg tgccgaggcc cgtagccgtg acgggcgcgc
     1801 atgggaaggg aagccgaaaa aacgtgccag cagaccgcaa ggaaatacac agaacgggtg
     1861 aattttacac atgtctgatt ttccgcaccg gactattgcc cgtcgctcaa tgccactcct
     1921 atcgtgttcc atgctag
//
LOCUS       DTVW01001102            1509 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2347613, whole
            genome shotgun sequence.
ACCESSION   DTVW01001102 DTVW01000000
VERSION     DTVW01001102.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1509)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1509)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1509
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2347613"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            50..160
                     /locus_tag="EYO87_14525"
                     /pseudo
     CDS             50..160
                     /locus_tag="EYO87_14525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011383105.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
     gene            complement(145..1509)
                     /locus_tag="EYO87_14530"
                     /pseudo
     CDS             complement(145..1509)
                     /locus_tag="EYO87_14530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011746860.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sarcosine oxidase subunit alpha family protein"
BASE COUNT          259 a          497 c          473 g          280 t
ORIGIN      
        1 cttgccaacc tagccttgac tgtcaaatct atcacctgtt aaaccgtata tgaattctcg
       61 tgtgagcttc gccataaacc atctgactgc ggtcgcccaa gctggcagct ttacccatgc
      121 tggcgaggcg ctgaacttgt cgcaatcttc ggtcagccgc gcgacgacgc catcgtcgat
      181 gagaaatccg ttctcgctgc acatcaggcc atagcggcat tttccgaccg gcagtgtgga
      241 catcatgttg gtatagagca tgtcgaggaa gcggcccgca tccgcccctt tcacaaggat
      301 tttcccgagg gtcgaggcat cgagagtgcc caccccgccg cgcaccgtcc tgatttcgcg
      361 gttgacggcg gcgtggcggt cctcgcccac ctgcggatag caatagggtc ggcgccagtg
      421 gccgacgggc tcccacgagg caccgtgacg ctggtgccag tcatgcatcg gcgtcttgcg
      481 cagcggctga aacgcctcgc cccgcgcctc ggcggcgatc gtggccagcg tcagcggcgt
      541 gtagggcggg cggaaggttg tcgttccggt tgccggaacg ggttgtcgca acgcattgga
      601 aagaacggca agtccattga tattactgac tttaccctga tccgtcgcca tcccgagcgt
      661 ggtgtatcgc ttggtatgtt cgacactggc atagccttcg cgcgcggcca gttcgacgtc
      721 gctgaccttc acgtcgttct ggaaatccag ccacatcttc gaacgcagct tgtagggcgc
      781 ctcctggggc atgcaccaga ccggaagggt ggcgctttcc tcgcgctccg gatcgccggc
      841 acagcgcaga tcgccgtttg cggcgccggt ggcggtgaca ttgccctgac cgtcggcacc
      901 cagcggcgga cggtcgggat cggggcggaa catggcctgg ccttcgtccc agatcagctt
      961 gccgccgcaa tggctgtaga ggtggacgac cggcgaccag ccgcctgaca tcgcgaccac
     1021 gtcgcaatcg agcgacccga tcggtgtgcc gtcacccgcc tgatcgcaca ggaccacgct
     1081 ttccacatgc cgcccgcccc tgaccctggc gatcgcggtg ccggtcagga cgttgatgtc
     1141 ctgcgcccgc gcggcctgcg gcagatcgcc atcggcaccg gtgcgggcat ccagaaccgt
     1201 gacatccaga cctgccgccc tggcggtcag ggcggtgcga taggcgtcgt cgttgttggt
     1261 gaccacgacg atcctctggc ccggtgcgac gccgtaatcg gtgatgaaat cccgaacggc
     1321 cgatgccagc atgacaccag gcagatcatt gcaggcaaaa gccagcggcc gttccagcgc
     1381 gccggtcgcg gtaatgaccc gtccagcccg gatgcgccac aaccgctgac gcgggatcgc
     1441 tgcctcgatg tcgtggtcgg ccagcgcctc gcgcgccaga agatagccgt gatcgtaaag
     1501 tccggtcgc
//
LOCUS       DTVW01001103            5177 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2348141, whole
            genome shotgun sequence.
ACCESSION   DTVW01001103 DTVW01000000
VERSION     DTVW01001103.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 5177)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5177)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5177
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2348141"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            161..403
                     /locus_tag="EYO87_14535"
     CDS             161..403
                     /locus_tag="EYO87_14535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67186.1"
                     /translation="MALEYYRDLFHMAVCDMAKSSDKFSERLRIAWVNYLYKIHWSEL
                     EAMLMEEDLLHFKKLKKRLRDDLKKGKRPVCLHCRA"
     gene            417..831
                     /locus_tag="EYO87_14540"
                     /pseudo
     CDS             417..831
                     /locus_tag="EYO87_14540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018000155.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family insertion sequence element accessory
                     protein TnpB"
     gene            828..1175
                     /gene="tnpB"
                     /locus_tag="EYO87_14545"
     CDS             828..1175
                     /gene="tnpB"
                     /locus_tag="EYO87_14545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011749831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family insertion sequence element accessory
                     protein TnpB"
                     /protein_id="HIC67187.1"
                     /translation="MIPVPVNTRVWLAAGVTDMRRGFTTLAAQAEQTLKQDPFAGHMF
                     VFRGRRGDLIKIIWWDGQGACLFSKRLEKGRFVWPSAKEGKIALTAAQLAMLLEGIDW
                     RLPQRSWKPLKAG"
     gene            1236..2735
                     /locus_tag="EYO87_14550"
     CDS             1236..2735
                     /locus_tag="EYO87_14550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008554852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family transposase"
                     /protein_id="HIC67188.1"
                     /translation="MLDVAKSLPEDPDELRQFTALLLAEVKAQAVLIEKLRHQLAGHR
                     AARFGTSSESIEQLQLALENSEIAVAKMTAKLRLPDEEPKDKPKRRPIPDHIPRMEVE
                     LTTGDDDCAQCGGALRRLGEDVTEELEYVPGRFIVNRIVRPRFACSGCEGFTQAPLPS
                     RPIERGRPGAGLLAHVLVNKYADHLPLYRQSGIFERDGIDLDRSTLADWVGKSTALLE
                     PLADAIGWHVLAGQAIFADDTPVKMLAPGKGKTATARLWAYGRDERPWGSSVPPASWY
                     QFSPDRKGQHPKDHLAKYQGWMHADGYAGFEDLYRSGDIREVACMAHVRRKFVDVHRA
                     QGSAIADEAIRRIAQLYAVEKEARGSPPDRRVNIRQNKAKPIFDDLEVWLHGQLPNIS
                     GKSPLADAIRYALTRMARLRPYLDQGVLELDNNTAERAMRSIAIGRKNYLFVGSQTGG
                     KAAAIAYTLIETAKLNGIDPQAWLADTLARIPDYKINRVDDRIRPVSAL"
     gene            2796..3191
                     /locus_tag="EYO87_14555"
     CDS             2796..3191
                     /locus_tag="EYO87_14555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007815847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HIC67189.1"
                     /translation="MAGKKGQKKRVWSDEEKRSICAQARVSGVSVAQVARRYAMNTNL
                     IHKWLRDPRFVSEGHAADLSVPEDATFLPIEIAGIVPAPTAPIAPTPSTDSITAQRVD
                     ITLSDGRRILVEGPTALSAISTLVEALAQ"
     gene            3188..3535
                     /gene="tnpB"
                     /locus_tag="EYO87_14560"
     CDS             3188..3535
                     /gene="tnpB"
                     /locus_tag="EYO87_14560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011749831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family insertion sequence element accessory
                     protein TnpB"
                     /protein_id="HIC67190.1"
                     /translation="MIPVPSNTRVWLAAGVTDMRRGFNTLAAQAEQVLAEDPYSGHMF
                     VFRGRKGDLLKIIWWDSQGACLFTKRLERGRFVWPAAKAGKVSLSPSQLSMLLEGIDW
                     RTPQKTWRPLATG"
     gene            3614..5140
                     /locus_tag="EYO87_14565"
     CDS             3614..5140
                     /locus_tag="EYO87_14565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007204951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family transposase"
                     /protein_id="HIC67191.1"
                     /translation="MLDAFKSLPEDPDELRSVSEQMARHIQAQAYQIEKLKAELHGHR
                     KARFGAKSEGMAQLALDLLEDDEIARAAEDQLTGQSPDDEEAAPNKRQHSRKPLPNHL
                     NREDEILSPGDTCEGCGSTLRQVGEDITQELDYIPGHFVVRRFIRPRMACTCCEAFAQ
                     APLPSRLIERGRPGPGLVSHMLVGKYCDHLPLERQSKIYAREGVDLHRSTLSDWVGRT
                     TALLEPLAAHIGKLVRAGPALFADDTPIKLQVRANTTKTKTARLWSYVRDERPWCGAA
                     PPCAWYQFSVDRKGEHPANHLAGYTGTVHADGFAGFNGLFGKGKADEQACMVHVRRKF
                     VDEVERTGSPIAQHAIKQIAELYAVEKEARRKSPEERVTLRQAKAKPVFDELELWLQA
                     QLRKISGKTKLAEAIRYALNRIPKARGYLRDGHLELDNNTCERSIRPIALGRKNYLFM
                     GSIGGGNAAAIAYTLIETAKMNDVDPEAWLTWVLQRLPDHKINRIDELMPWKWQAENA
                     "
BASE COUNT         1091 a         1493 c         1600 g          993 t
ORIGIN      
        1 aaaatgcccg ccaacctccg cgccgcgcat gatcacaacg acgaggttct ggaacgcatc
       61 tacatcggcc gccgcttccg caacgacacc gaacggctgg aaaaactgtt cgagatgtac
      121 acgaagatga cgacgaaggt gagcgcatga gggatctgtc atggctctag aatactaccg
      181 cgatcttttc cacatggctg tttgcgacat ggccaagtca tccgacaagt tcagtgaaag
      241 gcttcgcatt gcttgggtaa attatctcta caaaatacat tggtcagagc ttgaggccat
      301 gctgatggaa gaagaccttc tgcacttcaa gaagttgaag aaacgactgc gggatgatct
      361 gaaaaaaggt aagcgtccgg tctgcctgca ctgccgcgca tagagtgtgt tcgatagtgt
      421 ccgctttgga tggcggacac tacggagcag ggaatggcgc gtcggacgaa gcggctttgg
      481 acggatgaag agaagcggac gatctgcttt cagacgacgg cagcgggcgt ttctgtggcg
      541 caggttgcac gccgctatgc gatgaacgcg aacatgattt tcaaatggtt gcgcgatcct
      601 cggtatgcgc ctgaccctga aggggttgag gaactggcga cggaagcacc ctgctttctg
      661 cctgtagaga ttattgatcg cccccagagg gatactcctg caccgacacc cgaacctacg
      721 tctgtgcaaa gtgcgattga gatcgatatc gctggtggcc accgactgag gattatcggt
      781 ggctatgacc ccgaggcttt ggcccggttg atccgaggtc tttccgcatg atcccggttc
      841 cggtgaacac gcgggtctgg cttgcggctg gcgtgaccga catgcggcgt ggatttacga
      901 cgctggcagc ccaagccgag cagacgctga agcaggatcc atttgcaggc cacatgttcg
      961 tcttccgcgg tcggcggggt gatctgatca agatcatatg gtgggatggt cagggcgcgt
     1021 gcctgttcag caaacggctt gagaagggcc ggtttgtttg gccatcggcc aaagagggta
     1081 agatcgccct gacggccgcc cagttggcga tgctgctgga gggcatcgac tggcggttgc
     1141 cccaacgtag ctggaagccg ctcaaggcgg gataaaccgc ttggagcaag tctgcgggga
     1201 ttcctctgag cgcgcggatc gggtatgatc cgatcatgct ggacgtcgct aaatccctgc
     1261 cggaagaccc tgatgaactg agacagttca cagcgctttt gctggccgag gtgaaggctc
     1321 aagccgtttt gatcgagaag ctgaggcatc agttggcagg ccatcgcgcg gcgcggtttg
     1381 gcacctcgtc cgagagcatc gaacagcttc aactggcctt ggagaacagt gagattgccg
     1441 tcgccaagat gacggcgaag ctgcgccttc ctgatgagga accaaaagac aagccgaagc
     1501 gccgtccgat cccggatcac atcccgcgca tggaagtcga actgaccact ggcgacgacg
     1561 attgcgccca gtgcggtggc gctcttcgcc gtctgggcga ggatgtgacc gaagaactgg
     1621 aatatgtgcc cggtcggttc atcgtgaacc gcatcgtgcg gcctcgcttt gcttgttcgg
     1681 gttgcgaggg cttcacgcag gctccgttgc cgtcgcgccc aatcgagcgc ggtcgtcccg
     1741 gtgcaggtct gctggcgcat gtgctggtca acaaatacgc cgatcacctg ccgctctatc
     1801 ggcaaagcgg gatcttcgag cgcgacggga ttgatctgga ccgctcgacg ctggccgact
     1861 gggtcggtaa gtcgacggcc ctgctggaac cgctcgcaga tgccatcggg tggcatgtgc
     1921 tggccggaca ggcgatcttt gcagatgaca cgcccgttaa gatgctggcc cctggcaagg
     1981 gcaagacagc gacggctcgg ctttgggctt atggccggga tgaacgtcct tggggcagca
     2041 gcgtcccacc cgcaagttgg tatcagttct cgccggatcg caaagggcaa caccccaaag
     2101 atcatctcgc aaagtatcaa ggctggatgc atgcggatgg ctacgccggg ttcgaagacc
     2161 tctatcgctc gggcgacatc cgtgaggtcg cctgcatggc acatgtcagg cgcaagttcg
     2221 tcgacgttca cagggcccag ggctcggcca tcgccgatga ggccatcaga cgcatcgcgc
     2281 agctctatgc ggtcgaaaaa gaggcgcgag ggtcaccacc tgaccggcgg gtcaacatcc
     2341 ggcagaacaa ggcaaagccg atcttcgatg atctggaagt ctggctgcat ggccaactgc
     2401 ccaacatctc cggcaagtcg ccactggcgg acgcgatccg ctatgccctg acgcgcatgg
     2461 cacggctccg gccctatctc gatcaaggcg ttctggaact cgataacaac acggcagaac
     2521 gcgcgatgcg ctccatcgca ataggccgca aaaactacct gttcgtgggt tcgcagactg
     2581 gcggcaaggc tgccgcgatc gcttataccc tgatcgaaac cgccaaactg aacggtatcg
     2641 atccgcaagc ctggctggcc gacacactcg cccgcattcc tgactacaag atcaaccgcg
     2701 tcgacgatcg tatccgtccg gtctcggcgc tctgacgggg tgatggagtg cctgctagat
     2761 gtccaccatc gatagtggac atcttgaggt tggttatggc gggcaagaag ggccagaaga
     2821 agcgggtctg gtcagacgag gagaagcggt cgatctgcgc gcaggcgcgg gtttccgggg
     2881 tctcggttgc gcaggttgcg cggcgctatg caatgaacac caacctgatc cacaagtggc
     2941 tccgcgatcc tcggtttgta tccgaggggc acgctgcgga tttgtcggtg cctgaggatg
     3001 caacgtttct tccaatcgag attgcgggca tagtccccgc tccaacggca cctattgcgc
     3061 ccaccccttc aacagactcc atcaccgcgc agcgcgtgga catcacgttg tcggatggcc
     3121 ggcgcatttt ggtggagggg ccgacggcgc tgtcagcgat ttcgacgttg gtcgaggcac
     3181 tggcgcaatg atcccggtgc caagcaacac gcgggtttgg ctggcggccg gcgtcacgga
     3241 catgcggcgc ggtttcaata ctctggcggc acaggctgaa caggttttgg ccgaggatcc
     3301 atattcgggc cacatgttcg tcttccgtgg tcgcaagggc gatcttttga agatcatctg
     3361 gtgggatagc cagggggcct gcctattcac caagcggctg gaacggggcc ggtttgtttg
     3421 gcctgcggcc aaggcaggca aggtcagcct gagtccgtcg cagctgtcga tgctactgga
     3481 agggatcgac tggcgaacac cgcagaagac atggcgaccg ctggcgacgg gatagggata
     3541 tagtccaaca aaacatgggc tttggagctg ttttgcattc cctgatttgg ggcgatctgc
     3601 tatggattgc gccatgctgg atgccttcaa atccctgcct gaagaccctg acgagttgcg
     3661 ctctgtcagc gagcagatgg cccggcacat tcaggcccaa gcctaccaga tcgagaagct
     3721 gaaggccgaa ctgcacggcc atcgcaaagc gcgctttggc gcgaagtcag agggtatggc
     3781 tcaattggcc ctcgatctgt tggaagacga tgagatcgcg cgtgcggcag aagatcaact
     3841 caccgggcag tcacctgatg atgaagaggc cgcacccaac aagcgtcagc acagccgcaa
     3901 gccgttgccc aaccatttga accgggaaga tgagatcctg tcgccgggcg acacatgtga
     3961 aggctgcggc agcactctgc gccaagtggg cgaggacatc acccaagagc tggattacat
     4021 ccctggtcac ttcgtcgtgc gacggttcat tcgcccccgt atggcctgca cctgttgtga
     4081 agcctttgcc caggccccgc tgccgtcgcg cctgatcgaa cgtgggcgcc ccggtcccgg
     4141 ccttgtgtcg cacatgttgg tcggcaaata ttgcgatcac ctgccacttg agcggcaatc
     4201 caagatctac gcacgcgaag gggttgattt gcaccgctcc acgctcagcg actgggtcgg
     4261 gcgcacaacg gccctgctgg agcctctggc cgcgcatatc ggcaaactgg tccgggcggg
     4321 cccagccctg tttgccgacg acacccctat caagctgcag gtgcgcgcca acaccacgaa
     4381 gaccaaaact gcccggctct ggagttatgt ccgggacgaa cgtccgtggt gcggagcagc
     4441 gccaccatgc gcttggtatc agttcagcgt tgatcgaaaa ggtgagcacc ccgccaacca
     4501 tctcgcgggc tataccggca cggtccatgc cgatgggttt gcagggttca acggcctgtt
     4561 cggcaaaggc aaagccgatg agcaagcctg catggtccat gtgcgccgca agttcgtcga
     4621 cgaggtcgag cgcactggct ctcccattgc ccaacacgcg atcaaacaga ttgcggaact
     4681 ttacgctgtc gagaaggagg cgcggaggaa atccccagaa gagcgcgtca ccctgcggca
     4741 agccaaggcc aagccggtct tcgacgagtt ggaactctgg ttgcaggcgc agttgcgcaa
     4801 gatctccgga aaaaccaaac tggccgaagc catccgctat gccctgaacc gcatcccgaa
     4861 agcgcgcggc tatctcagag acgggcatct cgagctcgac aacaatacct gtgagcggtc
     4921 gatcagacct attgcccttg gaaggaagaa ttatctgttc atggggtcaa tcggcggcgg
     4981 gaacgcagcc gccattgcct acacgcttat cgagaccgct aagatgaacg acgtcgaccc
     5041 cgaagcgtgg ctcacatggg tccttcagcg cttgcctgat cacaagatca atcgcatcga
     5101 cgaactcatg ccatggaaat ggcaggccga aaacgcctga caccgcggct caaccggacg
     5161 cttaccgacg atctgct
//
LOCUS       DTVW01001104            1892 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2348593, whole
            genome shotgun sequence.
ACCESSION   DTVW01001104 DTVW01000000
VERSION     DTVW01001104.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1892)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1892)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1892
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2348593"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(59..265)
                     /locus_tag="EYO87_14570"
     CDS             complement(59..265)
                     /locus_tag="EYO87_14570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67192.1"
                     /translation="MTDQTTDLLGKELTDDEKELLDLYARLKTMSAREDLAPCALMNV
                     RQAMVMLWNACTDLELIYEEPGVD"
     gene            368..859
                     /locus_tag="EYO87_14575"
     CDS             368..859
                     /locus_tag="EYO87_14575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015920775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67193.1"
                     /translation="MVGGDDASFALVLPLFEVMGQKIVHCGPSGAGQAAKICNNMILG
                     ATMVVTCEAFALADRLGLDRQKMFDVVSTSSGYSWSMNAYCPAPGIGPNSPADNDYRP
                     GFASELMLKDLDLARKAAVSVKAATPIGSLARDLYDSFVHDGGGRGRDFSAILQRFEE
                     KDR"
     gene            961..1266
                     /locus_tag="EYO87_14580"
     CDS             961..1266
                     /locus_tag="EYO87_14580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67194.1"
                     /translation="MGTIKIGAIAALGIALAASLGAILPTGARPVPAVQAEEAALRVG
                     DIVPRAKAAIVTEPGFYGLGRDVPGSRYAIVEGKLVRLDAKNFRILSVLRQEAAASR"
     gene            1471..1785
                     /locus_tag="EYO87_14585"
     CDS             1471..1785
                     /locus_tag="EYO87_14585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67195.1"
                     /translation="MSRHVPALMKGNRAQVVYAQNCPPGLAKKSLPCIPPGQAKKSPI
                     RVGDVIDLGSVHVVTRPGAYGLSVPPAGDSYAIVDKRLVRVDSDSGKILSILRLIDAI
                     LD"
BASE COUNT          325 a          597 c          612 g          358 t
ORIGIN      
        1 cccgcgttgt gacccgcgtc gtgtccaggg gtcaggaatc cagggagcag gcggacggct
       61 aatcgacccc cggttcctcg tagatgagct ccaggtccgt gcacgcgttc cagagcatga
      121 ccatcgcctg gcgcacgttc atcagcgcgc agggcgcgag gtcttcgcgg gcggacatcg
      181 tcttgagcct tgcgtagagg tcgagcagtt ctttctcgtc gtcggtgagt tccttgccca
      241 acaggtcggt ggtttggtcg gtcatcgtag tgtcctattg gtcgcgcagg tcctgaagtc
      301 gtttggcctt gagttcgaat cgcggaagct cgccctcggc ggcgcgcagg cgggcagcct
      361 gaccttcatg gtcggcggcg atgacgcctc gttcgccctt gtcctgccgc tgttcgaggt
      421 catgggccag aagatcgtcc attgcgggcc atcgggggcg ggacaggccg ccaagatctg
      481 caacaacatg atcctcggcg cgacgatggt cgtcacctgc gaggcctttg cgctggccga
      541 ccgtctgggt ctggaccggc agaagatgtt cgatgtggtc tcgaccagtt ctggctatag
      601 ctggtcgatg aacgcctatt gccccgcccc cggcatcggc ccgaattcac ccgcggacaa
      661 cgattaccgg ccgggctttg cgtccgaatt gatgctgaag gatctggatc ttgcccgcaa
      721 ggcggccgtt tccgtgaagg ccgccacgcc gatcggatcg ctggcgcgtg atctttacga
      781 ttctttcgtc catgacggcg gaggtcgtgg ccgtgacttt tcggcaattc tgcaacgctt
      841 cgaggaaaaa gaccgctgat ggccggccgg atgcaggaac cgcgtccgca aggcggaacc
      901 cgcgcgcgcg tgatcggttt accccgccga tgacgaaaag acagcctgga cagcgaaaca
      961 atgggaacca tcaagatcgg cgcgatcgca gccctcggga tcgcgctggc agccagcctt
     1021 ggcgccatcc tgcccacggg ggctcggccc gtgcctgccg tccaggccga ggaagccgcg
     1081 cttcgggtgg gtgatatcgt gccccgggca aaagcggcga tcgtcaccga acccggtttc
     1141 tacggtctgg gccgcgatgt cccgggcagc cgttatgcga tcgtcgaggg aaagctggtc
     1201 cgtctcgatg cgaagaattt ccgcatattg tccgtgctgc ggcaagaagc cgcagcctct
     1261 cgctagccga tcccgtcctg cggcgtttcc gatggcggac gggaacggaa ccggaaaccc
     1321 cgatgaacgg ttgagcgaga tgtcagggaa tttcgcatga caaccgctcg acatcttatc
     1381 gcagccataa ccgctctggg catcggattg ctgccccttg cggccaccgc caatcccgga
     1441 agcggattca ggaagacgca gaagggcgtc atgagccgac acgtcccggc gctgatgaaa
     1501 gggaaccgtg cacaagtggt ctatgcgcag aactgcccgc ccggtctggc caaaaagtca
     1561 ctgccctgca tcccgcccgg tcaggcgaag aagtcgccga tccgtgtggg cgacgtcatc
     1621 gacttgggat cggtccatgt cgtgacccgg ccgggggctt acgggctcag cgtcccgccc
     1681 gcgggtgaca gctatgcgat cgtggacaaa cgtctggtca gggtcgattc cgacagtggc
     1741 aagatcctgt cgatcctgcg gctgattgac gcaattctgg actgatccgc gggctatccg
     1801 cccagcaatt cccgcgccgc ttccgaggcg gcgcgcgtca ccctgtcccc cgacagcatc
     1861 cgcgcgattt cggccacccg cgcctcgggg tc
//
LOCUS       DTVW01001105            1431 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2351296, whole
            genome shotgun sequence.
ACCESSION   DTVW01001105 DTVW01000000
VERSION     DTVW01001105.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1431)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1431)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1431
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2351296"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            52..>1431
                     /locus_tag="EYO87_14590"
     CDS             52..>1431
                     /locus_tag="EYO87_14590"
                     /inference="COORDINATES: protein
                     motif:HMM:PF02518.24,HMM:PF07730.11"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67196.1"
                     /translation="MRRLPLIPRILLVILAVQAGLFAALAAASLNAIRRDIGTETRLA
                     TETARALVLATIGTMQGAVPPDRLMAALPQRLVPPRHTRIGVLDARTGQITPVAAPAE
                     TSGGAPGWFARLVAPDPQEIRLPAVLAGRPRGFVYVVGDPTAGIAAAWREMRTILGLS
                     ALAAAVQMLLILVAVRQALRPVATIAARLADLRRGDLDARVGTLPQRDLAPVAAGVDA
                     LAGALQKAQADRARLQRRVVSRADQERKAIARDLHDEMGPCLFGLRVEADALRDAAPD
                     DAIRDHASSIAAIADQIARVNRSLLEDLRPVSIGQLPLAAVLAEYVDDMGRRFPRTDI
                     RLSLAPDLPEPDESVALTLFRILQEGITNALRHADARHIDIRLWTDPAHWRMILADDG
                     KGLDPDSREGTGLTGMRERITLLGGRMSLSSDGTGTAIEAILPLSQRHYAWLRLRHLH
                     RTSRGRSCRI"
BASE COUNT          197 a          530 c          487 g          217 t
ORIGIN      
        1 cccccccttt cgcccattta cgcgcgcgtg ccgccgcgcc aatctgccgc catgagacgc
       61 ctgcccctga tcccgcgcat cctgctggtg atcctcgccg ttcaggcggg gcttttcgcc
      121 gcgctcgcgg cggccagcct gaacgcgatc cggcgcgata taggaaccga aacccggctt
      181 gccaccgaga ccgcccgggc gctggttctt gccacgatcg gcacgatgca gggcgcggtg
      241 ccgcccgacc ggttgatggc ggcgctgccg caacgcctgg ttccgccacg ccatacccgg
      301 atcggcgtgc tggatgcgcg gaccgggcag atcacgcccg tcgccgcgcc ggccgagacc
      361 agcggtggcg cgcccggctg gttcgcccgg ctcgtcgcac ccgatccgca ggaaatccgt
      421 cttccggcgg tgctggcggg gcggccgcgg ggctttgtct atgtcgtggg cgatcccacg
      481 gccgggattg ctgccgcctg gcgcgaaatg cgcacgatcc tgggcctttc ggcgctggcg
      541 gcggcggtgc agatgctgct gatccttgtg gccgtccgcc aggctctgcg cccggtcgcg
      601 accatcgccg cccggctcgc cgatctgcgg cgcggcgatc tggacgcgcg cgtggggaca
      661 ttgccgcagc gcgacctggc cccggtcgcg gccggggtcg atgcgctggc cggcgcgctg
      721 caaaaggcgc aggccgaccg cgcccgcctg caacgccgcg tcgtcagccg cgccgaccag
      781 gaacgcaagg ccatcgcccg cgacctgcac gacgagatgg ggccctgcct gttcggcctg
      841 cgggtcgagg ccgacgccct gcgcgacgcg gcacccgatg acgcgatccg cgatcacgca
      901 agctcgatcg ccgccatcgc cgatcagatc gcgcgggtga accggtcgct tctggaggat
      961 ctgcggccgg tgtcgatcgg ccaattgccg ctggcggcgg tgctggccga atacgtcgac
     1021 gacatgggcc gccgctttcc gcgcaccgac atccgcctgt cgctggcccc cgacctgccg
     1081 gaacccgacg aatccgtcgc gctgacgctg ttccgcatcc tgcaagaggg aatcaccaac
     1141 gccctgcgcc atgccgatgc ccgccacatc gatatccggc tctggaccga cccggcgcat
     1201 tggcgcatga tccttgccga tgacggcaag gggcttgacc cggacagccg cgagggcacc
     1261 gggctgaccg ggatgcgcga gcggatcacg ctgctgggcg gccgcatgag cctgtcatcg
     1321 gacggaaccg gaaccgcgat cgaggcgatc ctgcccctgt cgcagcgaca ttacgcatgg
     1381 cttcgactac ggcatttaca ccgcaccagt aggggtcgat cttgccgtat a
//
LOCUS       DTVW01001106            1207 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2352869, whole
            genome shotgun sequence.
ACCESSION   DTVW01001106 DTVW01000000
VERSION     DTVW01001106.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1207)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1207)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1207
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2352869"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(95..808)
                     /locus_tag="EYO87_14595"
     CDS             complement(95..808)
                     /locus_tag="EYO87_14595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002721703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HIC67197.1"
                     /translation="MWSGPRNLSTAMMRSFGARPDCVCVDEPFYAHYLSQTGLPHPMR
                     DQVIASQPTDWRIVLPGLTTDPAAAPVQYQKHMVQHMLPGMDLGWTGTVTNVFLIREP
                     ERVVASFAAKRGLPDPAELGFARQWSMFREMAERGAAPIVIDSADIRRDPRRALRALC
                     AAIDLPWTEAMLSWQAGPHPEDGVWGAVWYDAVNRSNGFGGPEGPGPELDGPLADLAT
                     RLRPDYEAIAAHRLVLSGR"
     gene            complement(825..>1207)
                     /gene="ybgC"
                     /locus_tag="EYO87_14600"
     CDS             complement(825..>1207)
                     /gene="ybgC"
                     /locus_tag="EYO87_14600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011747027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tol-pal system-associated acyl-CoA thioesterase"
                     /protein_id="HIC67198.1"
                     /translation="RVYYEDTDLAGIVYYANYLKFIERGRSEWLRALGIDQAALKRQA
                     GLVFAVRRIEADYLRPARFDDLVQVATRLDMLSAARIVMDQTVTRDGEVLFAARVTIA
                     CLDARGRPTRLPAPLAAILRKADD"
BASE COUNT          223 a          411 c          393 g          180 t
ORIGIN      
        1 aacccgccgg tctgccggac cggctggcac ggatcgccgg ccttctagcc tctctttatc
       61 aaatcttgca gccccctgcc gcaacacaat ggcgtcacct gccggaaagc accagccgat
      121 gcgccgcgat ggcttcgtaa tccggacgca gccgggtggc cagatccgcc aacggcccgt
      181 ccagttcggg accgggcccc tcgggcccgc caaagccgtt cgagcgattg accgcatcgt
      241 accagaccgc accccagacg ccatcctcgg gatgcgggcc ggcctgccag gacaacatgg
      301 cctcggtcca gggcaggtcg atcgcggcgc ataatgcccg cagcgcgcga cgaggatcgc
      361 ggcggatatc ggcgctgtcg atcacgatgg gcgcggcgcc gcgttcggcc atctcgcgaa
      421 acatgctcca ctgacgggcg aaacccagct cggccgggtc gggcagaccg cgcttggccg
      481 cgaaagaggc cacgacacgc tcgggttcgc ggatcaggaa gacattggtg acggtcccgg
      541 tccagcccag gtccatgccg ggcagcatgt gctgaaccat atgcttctga tactgcaccg
      601 gcgcggccgc cggatcggtg gtcaatccgg gcagcacaat gcgccaatcg gtgggctggc
      661 tggcaatcac ctgatcccgc atcggatggg gcaggccggt ctgcgacaga taatgggcat
      721 agaacggttc gtccacgcag acacaatcgg gacgggcacc gaagctgcgc atcatcgccg
      781 tcgaaagatt gcgcggcccc gaccacatgg cgatgcggcg cggctcagtc atcggccttc
      841 cgcaggatgg cggcaagcgg tgcgggcagg cgcgtcggcc gtccgcgcgc gtccagacaa
      901 gcgatggtca cgcgggcggc gaacagcacc tcgccgtcgc gcgtgacggt ttgatccatc
      961 acgattcgcg cggcgctgag catgtcgagg cgggtcgcga cctgtaccag atcgtcgaac
     1021 cgcgccggcc gcagataatc cgcctcgatc cggcgcacgg cgaagaccag gcccgcctgc
     1081 cgtttcagcg cggcctgatc gatccccagg gcgcgcaacc attccgagcg tccgcgctcg
     1141 atgaatttga ggtaattggc ataatagacg atcccggcaa gatcggtatc ctcgtaatag
     1201 acgcgca
//
LOCUS       DTVW01001107            2112 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2353191, whole
            genome shotgun sequence.
ACCESSION   DTVW01001107 DTVW01000000
VERSION     DTVW01001107.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2112)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2112)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2112
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2353191"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            360..1466
                     /locus_tag="EYO87_14605"
     CDS             360..1466
                     /locus_tag="EYO87_14605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019064227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase M4 family protein"
                     /protein_id="HIC67199.1"
                     /translation="MCHSVCSRDPIRSIQCIVPPHMLRVIALRGDERTAEMARSLLKQ
                     TQQLRQEREDHVHPGTPGPDMPPAAAVARRKRGARASRYRPDRRVHDGQHKAALPGTL
                     VRAEGDPPAGIADADRMYDAMGEVFSLYADQFDRDSLDGHGMPLLATVNHRRNYNNAF
                     WDGDQMAFGNGDGKLFRSFIDPTVIAHEMTHGVIQYSGGLIYQDQSGALNESLADVFA
                     AISVQHQLKQTPAEADWIIGGELLGPDIKGVGLRSLKAPGTAYHDDLLGQDPQPFHMD
                     NFLSTKDDDGGVHINSGIPNHAFYLYCMLLGGPSWEKPGQIWYRALQEMNNPLATFAE
                     WSDQTVAAAITLYGMGSPEMVLLRRAWKLVGLPG"
     gene            1605..1892
                     /locus_tag="EYO87_14610"
     CDS             1605..1892
                     /locus_tag="EYO87_14610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67200.1"
                     /translation="MIIEISSSGGFAGVPAAAMNKRIDVDQQTPQMRQEICEAFEPRD
                     LSQLASKSGARRGADMMTYRITVTDRQAGAHVFTIREDQLPPQMLDLIDQM"
     gene            complement(1944..>2112)
                     /locus_tag="EYO87_14615"
     CDS             complement(1944..>2112)
                     /locus_tag="EYO87_14615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012142133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="magnesium transporter"
                     /protein_id="HIC67201.1"
                     /translation="IAALFLPPTLIASIYGMNFTSMPELDTAWGYPAALLLMAATAGG
                     TWLVLRWKNWL"
BASE COUNT          374 a          694 c          668 g          376 t
ORIGIN      
        1 cgatcagggt gcgcgcccgt cagatcgtcg tcgcgacggg cgcatacgag gccccgatga
       61 ccttcgaccg caacgaccta tccggcgtga tgttgagcac gggcgcacag cgcctggtcc
      121 acggcaaggt caacggcgcc gacgtgacga tcgccctgcc ctcgcatggc gaattgtccg
      181 acaggctgcg cctgaatgcc gcccccgagg ccctgcatcg cttcgacgat aaaagcggca
      241 agcggctgga ctgaacgccc tttcggccgc gggtgatcgg tgagcagcga ctcatgttcc
      301 gtctttgttc cgggtacggg ctgtgttaac ctcgattctc cagccagagg tgaatacgca
      361 tgtgccattc ggtctgttcg cgcgacccca tccgctcgat ccagtgcatc gtcccgcccc
      421 acatgctgcg cgtgatcgcc ttgcggggcg atgaacgcac tgccgaaatg gcgcgcagcc
      481 tgctgaagca gacgcagcaa ctgcgccagg aacgcgagga tcacgtccat cccggcacgc
      541 ccggccccga tatgccgcca gccgccgctg tcgcgcgacg aaagcgtggc gcaagggcca
      601 gccggtaccg ccccgaccgc cgcgtccatg acggccagca caaggcggcc cttcccggca
      661 cgctggtccg ggcggaaggc gatccgcccg ccgggatcgc ggatgccgac cgcatgtatg
      721 atgcgatggg cgaggtgttt tcgctttacg ccgatcagtt cgaccgcgat tcgctggacg
      781 gtcacgggat gccgctgctg gcgaccgtga accaccggcg caactacaac aacgccttct
      841 gggatggcga tcagatggcc ttcggcaatg gcgacggaaa gctgtttcgc agtttcatcg
      901 accccacggt gatcgcgcat gaaatgaccc atggcgtgat ccagtattcc ggcgggctga
      961 tctatcagga tcagtcgggc gcgctgaacg aaagcctggc cgacgtcttc gccgcgatct
     1021 cggtccagca tcagctgaag cagacaccgg cggaggccga ctggatcatc gggggcgaat
     1081 tgctgggtcc ggacatcaag ggcgtcgggc tgcgcagtct gaaggcgcca ggcacagcct
     1141 atcacgacga tcttctgggt caggatccgc aaccctttca catggacaat ttcctgtcca
     1201 ccaaggacga cgatggcggc gtccacatca attccgggat cccgaaccat gccttctatc
     1261 tgtattgcat gttgctgggc gggccatcct gggaaaagcc gggccagatc tggtatcgcg
     1321 ccctgcaaga gatgaacaat ccgctggcca ccttcgccga atggtctgac cagaccgtcg
     1381 ccgccgcgat cacgctttac ggcatgggca gccccgagat ggtgttgctg cgacgggcct
     1441 ggaagctggt cggactgccg ggctagggcg acctcggtcg ttttccgggg tccggcggcg
     1501 cgtccggcct gcccctatcc tttcggtgat cttgccggac cgcctttccc gccttatctt
     1561 ctgcgcatat gggttgtgca gcgataggcg ccgggtgtgt tgccatgatc atcgaaatat
     1621 cgtccagcgg cggctttgcc ggagttccgg ccgccgccat gaacaagcgg atcgacgtgg
     1681 atcagcagac cccgcagatg cggcaggaaa tctgcgaggc gttcgagccg cgcgatctga
     1741 gccagcttgc ctcgaaatct ggcgcgcgcc ggggcgctga catgatgacc tatcgcatca
     1801 ccgtcaccga ccggcaggcc ggggcgcatg tcttcacgat ccgcgaggat cagcttccac
     1861 cccagatgct ggacctgatc gaccagatgt aggatcttgg ccgtccctgc cccaagtgcg
     1921 gcaggccgat agccgcctcc gggctacagc cagttcttcc agcgcagcac cagccacgtt
     1981 cccccggccg ttgccgccat cagcagcagc gcggcgggat agccccatgc ggtgtccagt
     2041 tccggcatcg aggtgaagtt catcccgtag atgctggcga tcagcgtcgg cggcaggaag
     2101 agggctgcga tc
//
LOCUS       DTVW01001108            1743 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2353568, whole
            genome shotgun sequence.
ACCESSION   DTVW01001108 DTVW01000000
VERSION     DTVW01001108.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1743)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1743)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1743
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2353568"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..199
                     /locus_tag="EYO87_14620"
     CDS             <1..199
                     /locus_tag="EYO87_14620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011156778.1"
                     /note="with YejAEF is involved in resistance to microcin
                     C; Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="microcin ABC transporter ATP-binding protein"
                     /protein_id="HIC67202.1"
                     /translation="THDLGVAAQICDDVLVMQHGRAVEYGPAAEVLGNPKQDYTKALI
                     QAAPGRHWDFANFRPFAEAAE"
     gene            212..1375
                     /locus_tag="EYO87_14625"
     CDS             212..1375
                     /locus_tag="EYO87_14625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011046957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HIC67203.1"
                     /translation="MTILPIIEDSASELTAIFKDLHAHPEIGFTEHRTAGVVADKLRE
                     YGVDEIHTGISGTGVVGIVKGSREGQRRIGLRADMDALPIHELTNLPYASRTAGVMHA
                     CGHDSHTTMLLGAAKHLAATRDFAGTAVLIFQPAEEGLGGARGMLADGLFERFPCDEI
                     YGMHNMPNGQPGKVGICKGAAMAGASFFDITVQGQGSHAAMPQQSRDPLVIASALVNS
                     LQTIVARNVAPLDTCVLSVTQMHSGSAYNIVPDTATLAGTIRYFKDEVRELTETRMKE
                     LCAGFARGYGVEIDIDLRNIFDVLMNDGDLSDAYLEAAADIVGAENICGDEEPATGSE
                     DFADMLKVVPGAYCRISHSGTVGLHNPGFFLDPQVLPVGASIMARIVERRLAA"
     gene            1387..>1743
                     /locus_tag="EYO87_14630"
     CDS             1387..>1743
                     /locus_tag="EYO87_14630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008140007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HIC67204.1"
                     /translation="MNPLELPFDTDDMLKGLAPWIECESPTWDAVAVNRMMDLAAYDM
                     ATMGAEVERIPGRMGFGGSVRARFPHPDRGKPGIMISGHMDTVHPIGTLDVLPFRREG
                     DICYGPGLMDMKGGNYI"
BASE COUNT          325 a          555 c          561 g          302 t
ORIGIN      
        1 cacccatgac ctcggtgtgg cggcccagat ctgcgatgac gtgctggtca tgcaacatgg
       61 ccgcgcggtc gaatacggtc ccgcagccga ggtgctgggc aatccgaaac aggactacac
      121 caaggcgctg atccaggccg cgccgggccg ccattgggat ttcgccaatt tccgcccctt
      181 cgccgaggcg gccgaataag gagacgatat catgaccatc ctgcccatca tcgaggacag
      241 cgcgagcgag ctgaccgcga tcttcaagga cctgcacgcc caccccgaga tcgggttcac
      301 agaacatcgc acggccggtg tcgtggcgga caagctgcgc gaatacggcg tggacgaaat
      361 ccataccggc atctccggca ccggcgtcgt gggtatcgtc aagggcagcc gcgagggcca
      421 gcgccgcatc ggcctgcgcg ccgacatgga cgcgctgccg attcacgaat tgacgaacct
      481 gccctatgcg tcccggactg ccggcgtcat gcatgcctgc ggccatgaca gccacaccac
      541 gatgctgctg ggcgcggcca agcaccttgc ggccacgcgc gatttcgcgg gcaccgcggt
      601 gctgatcttc cagcccgccg aagagggtct cggcggtgcg cgggggatgc tggcggatgg
      661 ccttttcgag cgttttccct gcgacgaaat ctacggaatg cacaacatgc ccaatggcca
      721 acccggcaag gtcggcatct gcaagggcgc ggcgatggcg ggggcgtcct tcttcgacat
      781 caccgtgcag ggccagggaa gccatgccgc catgccgcag caatcgcgcg acccgctggt
      841 gatcgcaagc gcgcttgtga acagtctgca aaccatcgtc gcgcgaaacg tggccccgct
      901 ggatacctgc gtgctgtcgg tgacgcagat gcattccgga tcggcctata acatcgtgcc
      961 ggacaccgcc acgctggcgg gcacgatccg ctatttcaag gatgaggtcc gcgaattgac
     1021 cgaaacccgg atgaaggagc tttgcgcggg cttcgcgagg ggctacgggg tcgagatcga
     1081 catcgacctg cgcaacatct tcgacgtgct gatgaacgac ggcgatctgt cggatgccta
     1141 tctggaagcc gccgccgata tcgtcggggc tgaaaacatc tgtggcgacg aagagcccgc
     1201 cactggatcc gaggattttg cggacatgct gaaggtggtt cccggagcct attgccggat
     1261 cagccattcc ggcacggtcg ggttgcacaa tcccggcttc ttccttgacc cgcaggtgct
     1321 gcctgtcggc gcctcgatca tggcgcgcat cgtcgaacgc cgccttgccg cctgaaagga
     1381 catcgcatga acccgctgga actgcccttc gacaccgacg acatgctgaa gggcctggcc
     1441 ccctggatcg agtgtgaaag ccccacctgg gacgccgtcg ccgtcaaccg gatgatggat
     1501 cttgcggcct atgacatggc cacgatgggc gccgaggtcg agcgtattcc cggccgcatg
     1561 ggctttggcg gatcggtgcg cgcgcgtttt ccgcatcccg acaggggaaa gcccgggatc
     1621 atgatttcgg ggcatatgga caccgttcat ccgatcggca cgctggatgt gctgcccttc
     1681 cggcgcgagg gcgatatttg ctatgggccg gggctcatgg acatgaaggg cggcaactac
     1741 atc
//
LOCUS       DTVW01001109            1465 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2353731, whole
            genome shotgun sequence.
ACCESSION   DTVW01001109 DTVW01000000
VERSION     DTVW01001109.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1465)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1465)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1465
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2353731"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..311
                     /locus_tag="EYO87_14635"
     CDS             <1..311
                     /locus_tag="EYO87_14635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007816272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HIC67205.1"
                     /translation="TALGFNAHGGIGCISVTANVAPKLCAEFQEATLRGDYAAALEYQ
                     DRLMPLHLAIFVEPGLVGAKYAMSRLGLCDERVRLPLVGLTDPTRRLIDAALDHAGLN
                     "
     gene            618..1169
                     /locus_tag="EYO87_14640"
     CDS             618..1169
                     /locus_tag="EYO87_14640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006019790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HIC67206.1"
                     /translation="MSDAGGSEDWSDLMRAANTGDRAAYHRLLTLMTPVLRGIVRARA
                     AGMDVDWCEDVVQETLLAIHLKRATWDEALPLRPWAYAIARHKLVDAFRRRGRAVHLP
                     VEDFAETLESAPEPDPTERRDAAVLIGRLPERDAALMRCLALEGRDSEECGGRLGLKP
                     GALRVALHRALQRLARLRLEDER"
     gene            1166..>1465
                     /locus_tag="EYO87_14645"
     CDS             1166..>1465
                     /locus_tag="EYO87_14645"
                     /inference="COORDINATES: protein motif:HMM:PF06532.9"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1109 family protein"
                     /protein_id="HIC67207.1"
                     /translation="MKTDDLISLLVRDDTIPPAVTPRLVSAILLALALVAGLLVSLVG
                     VRADLARALADPVTRMKWLLPLALGLPALVAALRLSRPQTRGSPGLLFAALVAAAA"
BASE COUNT          200 a          470 c          530 g          265 t
ORIGIN      
        1 gcaccgcgct tggcttcaac gctcatggcg ggatcggctg catcagcgtc acggccaatg
       61 tcgcgccgaa actttgcgcc gagtttcagg aggcgaccct gcgcggcgat tatgccgcgg
      121 cgctggaata tcaggaccga ttgatgccgc tgcatctggc gatcttcgtg gaacccggat
      181 tggtcggtgc gaaatatgcc atgtcgcggc tgggcctgtg cgacgaacgc gtgcgtctgc
      241 cgctggtggg cctgaccgat ccgacgcgcc ggctgatcga cgcggcgctg gaccatgccg
      301 gcctgaactg aggtcaaggc cgggcttcgg ggcgtagccc cgcgtccgcc ggtccctcga
      361 tgggccggag aaggctgcgc cctcgtcgtt ccggccgtcg cgacggcttg ccctggcccg
      421 gtcgcggggc gattgcggtg gcaactttgg tgttcatctg taatctttcc ctggatcgat
      481 cggccggcgg ccttgccgtc ccggaagccc attcgcccga ttgcggggtt ccgccatgcg
      541 gatcgcggac agggaagcga gagacatttc cggcggcggc tgtaacgccc gcgcggaatc
      601 aggcgtaagg acatgcgatg agtgatgctg gcggttcgga agactggtcc gacctgatgc
      661 gcgccgccaa tacgggcgac agggcggcct atcaccgcct gctgacgctg atgaccccgg
      721 ttctgcgcgg tatcgtccgg gcacgcgctg cggggatgga tgtcgactgg tgcgaggatg
      781 tcgtgcagga aaccttgctg gcgatacatt tgaagcgcgc aacctgggac gaggcgctgc
      841 ctttgcgtcc ctgggcctat gcgatcgcac gacacaagct ggtcgatgcc ttccgccgtc
      901 gcggccgcgc ggttcacctg ccggtggagg atttcgccga gaccctggaa tcggcgcccg
      961 aacccgaccc gaccgaacgc cgcgatgcgg ccgtcctgat cggccgcctg cccgaacgcg
     1021 acgccgcgct gatgcgctgc ctcgcgctgg aaggtcgtga cagcgaggaa tgcggcggcc
     1081 gtcttggcct gaagccgggc gccctgcgtg tcgccctgca ccgtgccctg caacggctgg
     1141 cccggctgcg attggaggat gaacgatgaa gaccgacgat ctgatcagtc tgctggtgcg
     1201 cgacgacaca atcccgcccg ccgtgacgcc gcggcttgtt tcggcgatcc tgctggcgct
     1261 tgcactggtg gcgggactgc ttgtgtcgct ggtgggcgtg cgggccgatc tggcgcgggc
     1321 cttggcggac ccggtcacgc ggatgaagtg gctgctgccg ctggcactgg gactgccggc
     1381 cctggttgcg gccttgcggc tcagccgtcc gcagacgcgc ggatcgccgg ggttgctttt
     1441 cgccgcgctg gtggcggcgg cggca
//
LOCUS       DTVW01001110            2048 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2355239, whole
            genome shotgun sequence.
ACCESSION   DTVW01001110 DTVW01000000
VERSION     DTVW01001110.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2048)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2048)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2048
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2355239"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            235..>2048
                     /locus_tag="EYO87_14650"
     CDS             235..>2048
                     /locus_tag="EYO87_14650"
                     /inference="COORDINATES: protein motif:HMM:PF00535.24"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HIC67208.1"
                     /translation="MTMDAEPPPAIAAERLRRVRRQLTAGGLDSAETLAQLALRRDPS
                     SVEAVLLLARAAELRQGPKAKADLLHRHLPAVRDDLPLRRHLADALWQGGDVAGAVSV
                     AQDIIDGGRGDVQDHLLIGRGRIRQGDLEGAQRAADAARMLAPERPRPWLQLARIALL
                     RDGADARARILSHYLDEIGDSPVIRRDLAETLCDLGAAEAAREHLSRIAAQGLTTSRD
                     HLLQARIALAEADLAAAESQARTAARLAPDQPDPVLMLARIAHLKDGVAGRVRVLQGC
                     AEPARHSFRIRMNTAQTLITARRRDEARQVAEAIEPRNCSDRQLFLLASILHQCDAQA
                     RAATCLDLIDPDGGLGNALLLFQALEGSLSADNALVSCADRNLLPDLHSRALDILAAP
                     PPLRGRLNDAIDLDREADRLARRYASAAAYFGLPSEGPSPLVSILAPIHRRQDEENLA
                     KQIERQDYPALEAVIVCSGDDVDPKRLSHRLAGCSGLSRTRILSLRGGTSLSAALNMG
                     VAASRGDLIARFDADDIYLDDYLSRSIRFMQAMSADLCGKPEIFVHFEKIGGTILYDF
                     CPQDYQPWAGSRDVVGSGSSLIVTRAAAERLPFAEELA"
BASE COUNT          342 a          668 c          687 g          351 t
ORIGIN      
        1 cgcgcaagga ggccgaggag cattattaca atcccgccca taccgggctt ctggatctgg
       61 gtcttcagcc caacaggctg acccccgaga tcatggaccg gatgatcggc ctgacgatga
      121 aatatcgcga tcagatcgtg cccgaacgga tcttccgcgg ggtgaagtgg cgccgctgat
      181 gcccgacgat ggcgacacga tcggcccggc ggaaacccag cagccggatg cagggtgacg
      241 atggatgccg aaccgccccc cgccatcgcc gccgaacggc ttcggcgtgt ccgcaggcag
      301 ttgacggcgg gcggtctgga ttccgccgaa acgctggcgc agctggcatt gcggcgcgat
      361 ccctcgtcgg tcgaggcggt cttgctgctt gcgcgggcgg cagagttgcg tcaggggccg
      421 aaggccaagg ccgacctgct tcatcgccat ctgccggcgg tcagggacga tctgccactg
      481 cgccgtcacc tggccgatgc gctgtggcaa ggcggcgatg tcgcgggcgc cgtttcggtg
      541 gcgcaggaca tcatcgacgg cggacgcggc gatgttcagg atcatctgct gatcggtcga
      601 ggcaggatcc gtcagggcga tctggagggg gcgcagcgcg cggcggacgc ggcgcggatg
      661 ctggcgcccg aacgaccgcg gccatggctg caactggcgc gcatcgcgct gctgcgcgac
      721 ggcgccgatg cgcgggcgcg catcctgtcg cactatcttg acgaaatcgg cgattccccc
      781 gtcatcaggc gcgatctggc cgagacgctg tgcgacctgg gcgccgccga ggcggcacgg
      841 gaacacctgt cgcggatcgc ggcgcagggt ctcacgacat cgagagacca tttgttgcag
      901 gcgcgcatcg cgctggcaga ggcggatctg gcggcagccg aaagccaggc ccgaacggcg
      961 gcacgtcttg cacccgatca gccggacccg gtgctgatgc tggcccgcat cgcgcatctg
     1021 aaggacggcg tggctggccg ggtccgggtt ctgcaaggct gcgccgaacc ggcccgccac
     1081 agctttcgca tccgcatgaa caccgcccag accctgatca ccgcccgtcg gcgcgacgag
     1141 gccaggcaag ttgccgaggc gatcgagccg cgaaactgtt ccgaccggca gttgtttctg
     1201 ctggcgtcga tcctgcatca gtgcgacgcg caggcaagag ccgcgacgtg tctcgacctc
     1261 atcgaccccg atgggggact gggaaacgca ttgctgctgt ttcaggccct cgaaggtagt
     1321 ctttcggccg acaacgcgct ggtctcgtgc gcggaccgaa acctgctgcc cgacttgcat
     1381 tcgcgcgccc tggacatcct tgccgcgccg ccccccctgc gtggtcgtct gaatgacgcg
     1441 attgatctcg accgcgaggc ggaccggctg gccagacgat atgcctccgc cgctgcctat
     1501 ttcggattgc cctcagaggg tccgtcacct ctggtcagca tccttgcgcc gatccatcga
     1561 cgccaggacg aggaaaatct ggcgaaacag attgaaagac aggattatcc cgcgctggag
     1621 gcggtgatcg tctgcagcgg agatgacgtc gatcccaaac gcctgtcgca tcggcttgcc
     1681 ggctgttccg gcctctcgag gaccaggatc ctgtccttgc ggggcggaac ttcgctgtcc
     1741 gcggccctca atatgggggt cgcggcctcg cggggcgatc tgatcgcccg gttcgatgcc
     1801 gacgacattt atctggacga ctatctgtcg cgatccatcc gattcatgca ggcaatgtcg
     1861 gctgatctct gtggcaagcc cgaaatcttc gtccatttcg agaagatcgg cggcacgatc
     1921 ctgtacgatt tctgccccca ggactaccag ccctgggcgg gttcgcgcga tgtcgtcggc
     1981 agcggatcaa gcctgatcgt gacccgggcc gcggccgaaa ggctgccctt cgccgaggaa
     2041 cttgcaga
//
LOCUS       DTVW01001111            3560 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2356132, whole
            genome shotgun sequence.
ACCESSION   DTVW01001111 DTVW01000000
VERSION     DTVW01001111.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3560)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3560)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3560
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2356132"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            84..674
                     /locus_tag="EYO87_14655"
     CDS             84..674
                     /locus_tag="EYO87_14655"
                     /inference="COORDINATES: protein motif:HMM:PF00441.22"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
                     /protein_id="HIC67209.1"
                     /translation="MSLLVVDARASGVAVRSLSGFMTSVGEVTFDSVRVPQSALLGEP
                     ASDGWAALERAMLKAIPVLGAYQVGGCNAVFDLSVDYSRTREQFGTPIGRLQRVQDHI
                     INLVNRLDAARWSTYEALWKLDSGQPAEASVHMSKAVASEGYLWACNYAHEVHAGVGI
                     VREYGLTLHTRMSRTLYHFLGDPKFHKRRLGDALDL"
     gene            complement(849..1694)
                     /locus_tag="EYO87_14660"
     CDS             complement(849..1694)
                     /locus_tag="EYO87_14660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015163225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67210.1"
                     /translation="MERSSHHLASKVAQVTAMFWLLKIIATTLGETFGDFISQTLNLG
                     YVVGLSITGLLLVLVLTAQIRGDRFHPALFWAGIAATTTAGTEISDLMDRTLGLGYTL
                     GAMILAIGLVVTLSIWYVRKQDLSIYPIVDKEKELLFWIAVIFSNSLGTAFGDFLVDV
                     VGLSYSQGALVTMGVIGMVLVLHYMRAAVREQMSNYPASPFYQQMFAEAGFPEALETS
                     EWSDGMMDAVVLSGDEATVRERLMGMFAYGATELVLSPVVAGSDRNGSLERTLRLVAE
                     VSQGQ"
     gene            1902..2900
                     /locus_tag="EYO87_14665"
     CDS             1902..2900
                     /locus_tag="EYO87_14665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009565415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe(3+) ABC transporter substrate-binding
                     protein"
                     /protein_id="HIC67211.1"
                     /translation="MRLLVMASLLGATALPALAQEVNLYSHRQPELLKPLTDAFTEAT
                     GITVNTAFVDKGMVERLQAEGDRSPADLIMTVDAARLGEVEAAGVTQPIEDPALDIIP
                     ENLRDKDRQWFGLTTRARIIYASKDRVADGEVTTYEDLADPKWKGRICTRPFADDYNV
                     ALTAAYLAHHGEEATRQWLEGVKANLAKRPEGNDRGQVKSIWAGECDISLGNTYYMGQ
                     MLKDPEQKQWADSVRIVFPTFENGGTHVNVSGVAMTKAAPNKEAALKLVEFLVSDEAQ
                     KIYAETNYEFPVSDDVERSDLVKSWGQFTPDSLSLSEISDLRPKALDLIEEVNFDG"
     gene            3046..>3560
                     /locus_tag="EYO87_14670"
     CDS             3046..>3560
                     /locus_tag="EYO87_14670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017997851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside hydrolase"
                     /protein_id="HIC67212.1"
                     /translation="MAEKIIIDTDPGQDDAVAILLALASPELEVLGITTVAGNVPLPL
                     TTLNALKILELAGRADLPVFAGCEAPLRRRLVTAEHVHGKTGLDGIELPVPATAARDR
                     HAVDFIVETLRREPAGSVTLVPIGPLTNIARALERAPDIAARIRRIVIMGGAYFEVGN
                     ITPTAEFNIYV"
BASE COUNT          736 a         1146 c         1064 g          614 t
ORIGIN      
        1 atgtgctcaa cggcaccaag ctctttgtcc acgacgccct cggcgctacc cacttcatat
       61 gcgccgtacg caccgatcaa ggagtgtcgc tgctggtcgt ggacgccagg gcctccggcg
      121 tcgccgtgcg gagcctgtca gggttcatga ccagcgttgg cgaagtaacg ttcgattcgg
      181 tccgcgtccc gcagtcggcc ctgcttggag agcctgccag tgacggatgg gccgccctgg
      241 agcgggcgat gctcaaagca atccctgtgc tcggcgcgta ccaggtcggc gggtgcaacg
      301 ccgtcttcga cctatcagtg gactacagcc gcacacgcga gcagttcggg acgcccattg
      361 gacggctcca gcgcgtgcag gatcatatca tcaacctggt gaaccgatta gatgcggcgc
      421 gctggtccac ctacgaggcg ctctggaagc tcgatagcgg ccagccggct gaggccagcg
      481 tccacatgtc caaggcagtg gccagcgaag gctatctctg ggcatgcaac tacgctcacg
      541 aggtccacgc cggcgtcggc atagtacggg agtacggact gacgctgcac acccgtatgt
      601 cacgcaccct gtaccacttt ctgggcgacc cgaagttcca caagcgcagg ctgggcgacg
      661 ccctcgatct gtagaggcaa ggttcaatct ctgacatgat cctgtcgtag aatgcccctg
      721 ctttgcgtaa gagctagatg aaccccagga aggcgtagga agcctgagtt tcctgccgga
      781 gggttctagg gagggtcctc cctatctcaa tacattcgaa ggctggtgac gggaaaaaga
      841 cattccccct actgtccctg ggacacctcc gccacgagtc gcagcgtgcg ctccagcgaa
      901 ccgttcctgt cactgcctgc caccaccggc gacagcacaa gctccgtagc gccgtaggcg
      961 aacatcccca taagccgctc ccgaaccgta gcctcgtcgc ccgacaggac caccgcatcc
     1021 atcatcccgt cgctccactc ggatgtttcc aatgcctcag ggaagccggc ttcggcaaac
     1081 atctgctggt agaagggact ggcgggatag ttgctcattt gctctctgac ggcggcccgc
     1141 atgtagtgca gcaccaggac catcccgata acccccatgg tgaccagagc gccctgcgaa
     1201 tagctgagac cgaccacatc gaccaggaaa tccccgaagg ccgtgccaag gctgttcgaa
     1261 aagatcaccg cgatccagaa cagcagttcc ttttccttgt ccacgatcgg atagatcgac
     1321 agatcctgtt tgcgtacata ccagatcgac agcgtcacca cgaggccgat ggccagaatc
     1381 atggcgccaa gcgtgtatcc cagcccaagt gtccgatcca tcaggtccga aatctcggtt
     1441 ccggcggtcg ttgtcgccgc aattccggcc cagaacagcg ccggatgaaa ccggtcgccg
     1501 cgaatctgcg cggtcaggac caggaccagc agcagcccgg tgatcgacaa cccgacgaca
     1561 taacccaagt tcagcgtctg cgaaatgaag tccccgaagg tttcgcccag cgtcgtggcg
     1621 atgatcttca gcagccagaa catcgcagtg acctgcgcga ccttgctggc caagtgatgt
     1681 gaagaacgtt ccatggtcat tgtcccagtt gaatgatgat acgacgatct ctgtcgtcgc
     1741 acaggacacg catcgactgc tgcgattgcg gcttcatccg gcgcagattg aaaatccgta
     1801 atccggccgt ccggctttcc gattaattaa gtcgggtatt gacccgccga ccgcagattg
     1861 ccagaagcgg gaacagcaat acccgatgaa aggaatcaac aatgcgactg cttgtcatgg
     1921 catcccttct gggcgcgacc gccctgcccg ccctggccca ggaggtgaac ctctattcgc
     1981 accgccagcc ggaactgctg aaaccgctga ccgatgcttt caccgaggcc accggcatca
     2041 ccgtcaacac tgccttcgtg gacaagggca tggtcgagcg ccttcaggcc gagggcgatc
     2101 gcagccccgc cgatctgatc atgaccgtgg acgcggcccg tctgggcgag gtcgaggcgg
     2161 ccggcgtcac ccagccgatc gaggacccgg cgctggacat catccccgag aacctgcgcg
     2221 acaaggatcg ccagtggttc ggcctgacaa cccgcgcgcg aatcatctat gccagcaagg
     2281 atcgcgtcgc cgatggcgag gtcacgacct acgaggatct ggccgatccg aaatggaagg
     2341 gccggatctg cacccgcccc ttcgcggacg actacaatgt cgcgctgacc gccgcctatc
     2401 tggctcatca cggcgaagag gcgacccggc aatggctgga aggggtcaag gccaacctgg
     2461 ccaagaggcc cgagggcaac gatcgcggcc aggtcaagtc gatctgggcg ggcgaatgcg
     2521 acatcagtct gggcaacacc tactacatgg gccagatgct gaaggatccc gaacagaagc
     2581 aatgggccga ttccgtgcgc atcgtgttcc cgaccttcga gaatggcggc acccatgtga
     2641 atgtctcggg ggtcgcgatg accaaggccg cgccgaacaa ggaagctgcg ctgaaactgg
     2701 tcgagtttct ggtcagcgac gaggcgcaga agatctatgc cgaaaccaac tacgaatttc
     2761 ccgtctcgga tgatgtcgag cggtccgacc tggtcaagag ctggggccag ttcacccccg
     2821 acagcctttc gctgagcgaa atctccgatc tgcggccgaa ggcgctggac ctgatcgaag
     2881 aggtgaactt cgacggctga tcagcccgaa ggttgcggcc acggaccgtt ccatggccgc
     2941 aatcccgcgc tggcgggacg caaggcaagc cgcggccggc aattctttcg ggttgcacga
     3001 tccgcaactc cgcatcagaa aagacgcgga tgagtgcgag cgaacatggc cgagaagatc
     3061 atcatcgaca ccgatccggg gcaggatgat gccgtggcga tccttctggc cctggcctcg
     3121 ccggaactgg aggtgctggg catcaccacc gtcgcgggca atgtcccgct gccgctgacc
     3181 acgctgaacg ccctgaaaat cctggaactt gccggtcgcg ccgaccttcc ggtctttgcc
     3241 ggatgcgagg cgccgttgag gcgcaggctg gtcaccgcgg aacatgtcca tggcaagacc
     3301 gggctggacg gcatcgaact gccggtgcca gcgacggccg cccgggaccg tcacgccgtc
     3361 gatttcatcg tcgagacgct gcgccgggaa cccgcgggca gtgtcacgct ggttcccatc
     3421 gggccgctga ccaatatcgc ccgcgcgctg gagcgcgcgc ccgatatcgc cgcacgaatc
     3481 aggcggatcg tgatcatggg cggcgcctat ttcgaggtgg gcaacatcac ccccactgcc
     3541 gagttcaaca tctacgtcga
//
LOCUS       DTVW01001112            2097 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2356227, whole
            genome shotgun sequence.
ACCESSION   DTVW01001112 DTVW01000000
VERSION     DTVW01001112.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2097)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2097)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2097
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2356227"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1034)
                     /gene="mnmH"
                     /locus_tag="EYO87_14675"
     CDS             complement(<1..1034)
                     /gene="mnmH"
                     /locus_tag="EYO87_14675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013068179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-selenouridine(34) synthase MnmH"
                     /protein_id="HIC67213.1"
                     /translation="MKPACVADPAFAGFDNIIDVRAPAEYAEDHLPGAINLPVLDDAE
                     RIEVGTIYKQVSPFDARRMGAALVAANAARHLAGPLSDRGGGWRPLVYCWRGGQRSGS
                     FQTILSQIGWRVARLEGGYKAWRGLVVDRVQNGPVAAPVVVLDGNTGSAKTAILHRLA
                     MRGVQVIDLEGLARHRGSLFGAIEGGQPSQKWFESRLAIAIEGLDPGRPVMVEAESSR
                     IGQISVPKAMWQAICAAPRIRLDVPVAARAAYSARDYADVVADSERLAAIIAALSRQH
                     PAERIATWQALAEAGAWVELAEGLMRDHYDPRYRKHRSRYAQRERAVVALDDLRDTDA
                     AAAAVEAALAG"
     gene            complement(1042..1605)
                     /locus_tag="EYO87_14680"
     CDS             complement(1042..1605)
                     /locus_tag="EYO87_14680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011746867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HIC67214.1"
                     /translation="MNRRQLMSLALPLIAAPSLGLAQAVTAPASTRDPYAPTEVAIRN
                     DFEVGSIVVVSDDFFLYHVIAPGRAIRYGVAVGKAELVWKGRARIGRKVEWPSWTPTQ
                     DMIKRNPGQYARWAGGMPGGPTNPLGARALYLYNAKGQDTAIRIHGTTEPGSIGRAVS
                     NGCIRMRNESVMSLFDRVPVGTPVYVY"
     gene            1795..>2097
                     /locus_tag="EYO87_14685"
     CDS             1795..>2097
                     /locus_tag="EYO87_14685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011746865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arylesterase"
                     /protein_id="HIC67215.1"
                     /translation="MAAAGAVAMPARLSARPAGPSILAFGDSLTAGFGLPPEEGLVPV
                     LSDWLARRGTPARLTNAGLSGETTYGGRVRINWALRGGADAVMVELGGNDMLLGWTA"
BASE COUNT          340 a          733 c          676 g          348 t
ORIGIN      
        1 ccggccaggg cagcctcgac cgccgccgcc gccgcatccg tgtcgcgcag atcatccagc
       61 gcaacgaccg cccgttcgcg ctgcgcatag cgcgaacggt gtttccgata gcgcggatcg
      121 taatggtcgc gcatcagccc ctcggccagt tccacccagg caccggcctc tgccagcgcc
      181 tgccatgtcg cgatgcgttc ggccggatgc tgccgggaca aggccgcgat gatcgccgcc
      241 agccgttcgg aatcggcgac cacatcggca tagtcgcggg ccgaataggc tgcccgcgcc
      301 gcgaccggga catccagcct aatgcggggc gccgcgcaga tcgcctgcca catcgccttc
      361 gggaccgaga tctgtccgat ccggctgctt tcggcctcga ccatcacagg gcggccggga
      421 tccagcccct cgatcgcgat ggccagacgg ctctcgaacc atttctggct gggctgaccg
      481 ccctcgatcg ccccgaacag gctgccgcgg tggcgcgcca gaccttccag atcgatcacc
      541 tgaacgccgc gcatggccag ccggtgcagg attgccgtct tggcgctgcc ggtattgccg
      601 tccagaacca cgacaggcgc ggcgaccggc ccgttctgca cgcgatccac gaccagcccg
      661 cgccacgcct tgtagccgcc ttccaggcgc gccacgcgcc agccgatctg cgacaggatc
      721 gtctgaaagc tgcctgaacg ctgcccgccg cgccagcaat agaccagcgg ccgccagccg
      781 ccgccgcgat cggacagcgg acccgccaga tgcctcgcgg cgttggcggc gaccagggcc
      841 gcacccatcc tgcgcgcgtc aaagggtgat acctgcttgt agatcgtgcc gacctcgatc
      901 ctttcggcat cgtccagaac cggcaggttg atcgcgccgg gcagatgatc ctcggcatat
      961 tcggcggggg cgcggacatc gatgatgttg tcaaacccgg caaaagccgg atcggcaacg
     1021 caagcgggct tcagtatcaa gtcagtagac gtaaacgggt gttcccaccg gaacccgatc
     1081 gaacaggctc atcaccgatt cgttgcgcat ccggatacat ccgttggaga ccgcgcgacc
     1141 gatcgagccc ggctcggtcg tgccgtggat gcggatcgcg gtatcctgac ccttcgcgtt
     1201 atagagatac agcgcgcgcg ccccaagcgg attggtgggc ccgcccggca tgccgcccgc
     1261 ccatctggca tattgacccg gattgcgctt gatcatgtcc tgcgtgggcg tccagctggg
     1321 ccattcgacc ttgcggccga tacgggcacg gcccttccag accagttcgg ccttgccgac
     1381 ggccacgcca tagcggatcg cccgtcccgg cgcgatcaca tgataaagaa agaagtcgtc
     1441 actgacgacg acgatgctgc cgacctcgaa atcgttgcgg atggcgactt ctgtcggcgc
     1501 ataggggtcg cgggtcgaag ccggcgcggt gacagcctgc gccagtccca gcgacggggc
     1561 ggcgatcagc ggcaaggcca gcgacatcaa ctgacggcgg ttcatggcga tcatttcctg
     1621 caggctgctc gggttcgtct tttccttgtc tgaatacagc aaaagagggg catcctgcaa
     1681 ctgatctgca cgcatctgac gtattcgtgg cttgattcgc ggcccgccgg gcgacattcc
     1741 gctgtcatga catcacgcca cctcccccgc cccgatcgcc gccgcgtcct tgccatggcg
     1801 gctgcgggcg cggtcgcaat gcccgcgcgc ctgtcggctc ggcctgccgg tccaagcatc
     1861 ctcgccttcg gggacagcct gaccgcgggc ttcggtctgc cgcccgaaga ggggttggtt
     1921 cccgtgctgt cggactggct ggcgcggcgc ggaacgcccg cgcggctgac caatgccggg
     1981 ctatcgggcg agacgactta tggcggccgg gtgcggatca actgggcgct gcgcggtggc
     2041 gccgatgcgg tgatggtcga gttgggcggc aatgacatgc ttctgggctg gaccgcc
//
LOCUS       DTVW01001113            1799 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2356332, whole
            genome shotgun sequence.
ACCESSION   DTVW01001113 DTVW01000000
VERSION     DTVW01001113.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1799)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1799)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1799
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2356332"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..264
                     /locus_tag="EYO87_14690"
     CDS             <1..264
                     /locus_tag="EYO87_14690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HIC67216.1"
                     /translation="QGGAGGDLDVAVLPADAFSGGLSVVQMLVQAGITSSGKEAKRLI
                     AEGGLRLNNQPVTDPQMPIGSAMIGDGMKVSVGRKKHRMVRIG"
     gene            complement(662..1693)
                     /locus_tag="EYO87_14695"
     CDS             complement(662..1693)
                     /locus_tag="EYO87_14695"
                     /inference="COORDINATES: protein motif:HMM:PF05036.11"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67217.1"
                     /translation="MRVLVGILLWMMAAGPVLAAPAPPPPEDFAALQYIDGAGCVFRR
                     ADGEWIPKLDKTGVRICGFPPTFSTRRTDPETDRVLPLGEAKVPPSPEDRLIQALAFG
                     LRAGEFTADPRAAQPIAARAEASGQQAFARDLDTVMTKEAEVRAAMAAMQDAPDGLCE
                     KLGYVADPGAAPVLGQDVTLGLCAGMRPVTLSARVRRGAMEGEADPQDAGQTGRRTSP
                     AVAGSSIRRDRRPAASRPPDRAARKAVASSGPARRSRAATVAADRVEMIPASARYVRI
                     GDYAAEANAAGAIRRLSDLGYRVAQTYGRRGGIRVRIILAGPFRDRRSLVEALNHLRR
                     NGYPRAVAR"
BASE COUNT          304 a          619 c          589 g          287 t
ORIGIN      
        1 cagggcgggg cgggcggcga tcttgatgtc gcggtattgc cggcggacgc attttcgggc
       61 gggctgtcgg tcgttcagat gctggttcag gccggcatca cgtccagcgg caaggaggcc
      121 aagcgcctga tcgccgaagg gggcctgcgg ttgaacaatc agccggtcac cgatccgcag
      181 atgccgatag gatcggcgat gatcggcgat ggcatgaagg tatcggtggg caggaaaaaa
      241 caccggatgg tccggatcgg ctgaggcccg atggggccga ataccgcgca ttcgagctgt
      301 gacgcggcgt catggctctg gcatccacgg ccgccgccgt ctatctgaac ctgcttgcaa
      361 gagaatcctc ctatggagag acgagatgag cgacgacaag cgatcgacgg atgcgccccg
      421 gatttcagac cagccgggca aggaagccgc ggcttcggat gccgcgggcg ctgccgcgcg
      481 gcccgcgccg atccggcgcg cgatcgtgac cgaacttgat gccctgaagc cggtctgatc
      541 ccggcaggcc gatctgcggg atctgagcct ggtcagtcca tcctttcgat ccgatgcctt
      601 gcgtcgcggc cttgcatgtc ccgcctccgt ccgcggatct ggtccggtgg cagtcagtgc
      661 cctatcgggc cacagcgcgt ggatagccgt tgcggcgcag atgattcagg gcctcgacca
      721 gcgagcggcg gtcgcgaaac ggccctgcaa ggatgatccg aaccctgatc ccgccccgtc
      781 ggccataggt ctgcgccacg cgatagccaa gatcggaaag ccgccggatc gcgccggccg
      841 cattcgcctc cgccgcataa tctccgatcc ggacatagcg ggccgaggcc ggaatcattt
      901 cgacacgatc cgctgccacg gtcgcggccc gcgatctgcg ggccgggccg gagctggcga
      961 cagctttcct ggcggccctg tccggcggcc gcgacgcggc gggacgccgg tcccggcgaa
     1021 tggatgagcc ggcgacagcc ggcgatgtcc tgcgccctgt ttgtccggca tcctgcgggt
     1081 cggcctcgcc ttccatcgcg ccccggcgaa cccgcgcgga caatgtgacc ggccgcattc
     1141 ccgcgcacag gccaagcgtg acatcctgcc ccagcaccgg cgcggcaccc ggatcggcca
     1201 catagcccag cttttcgcac aatccgtcgg gcgcgtcctg catcgcggcc atcgcggccc
     1261 gaacctctgc ttccttcgtc atcaccgtgt ccaagtcgcg cgcgaaggcc tgttggccgg
     1321 atgcctcggc acgcgcggcg atcggctgcg ccgcacgggg gtcggccgtg aattcgcccg
     1381 cgcgaagccc gaaagccagg gcctggatca accgatcctc ggggctgggc ggaacctttg
     1441 cctcgcccag cggaagcacg cggtccgttt caggatccgt gcgccgggtc gagaatgtcg
     1501 gaggaaatcc gcagatccgc accccggtct tgtccagctt cggtatccat tcgccatccg
     1561 cgcgtcgaaa cacgcatccg gcaccgtcga tatactgaag ggccgcaaaa tcctcgggag
     1621 gcggcggtgc cggcgcagcc aggaccggcc ccgccgccat catccacaac aagatcccga
     1681 ccagcacccg cataaatcac ccgcgattcg acccttcatg tcacgggata gggcaaaagc
     1741 ctgaaacggt tgttaacgcg gtcctatttc gtgccgaaca tccggtcgcc cgcatcgcc
//
LOCUS       DTVW01001114            1018 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2358028, whole
            genome shotgun sequence.
ACCESSION   DTVW01001114 DTVW01000000
VERSION     DTVW01001114.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1018)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1018)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1018
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2358028"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..603
                     /locus_tag="EYO87_14700"
     CDS             <1..603
                     /locus_tag="EYO87_14700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013066342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HIC67218.1"
                     /translation="MKIALTGRTAHASQPEHGVSPAMALAALVPALTALGSGGQQSDP
                     AFSLVTITHARLGEPAFGIAPGEAELRATLRTQRDEGMARLVAAAERTVGQAAATAGL
                     AHAITWHDVFHHCQNDPEATAILSRALAAEGFVVGSNGLPMRASEDFGRFGGCSRAAM
                     FLLGAGRDVASLHNPDYDFPDDLIEPGARIFIRALSEVLG"
BASE COUNT          148 a          372 c          325 g          173 t
ORIGIN      
        1 atgaagatcg cgctgaccgg ccgcaccgcc catgcctcgc agcccgaaca cggcgtctcg
       61 ccggccatgg cgctggccgc gctggtcccc gcgctgacgg cgctcgggtc gggcggccag
      121 caatccgatc ccgccttctc gctggtcacg atcacccatg cccggctggg cgagccggca
      181 ttcggcatcg cgcccggcga ggcggaattg cgggcgacgc tgcgcacgca gagggatgag
      241 gggatggccc ggctggtcgc ggcagccgaa cgcaccgttg gacaggcggc cgccaccgcg
      301 ggactggccc atgcgatcac ctggcacgac gtgttccacc attgccaaaa cgaccccgag
      361 gcgaccgcga tcctgtcgcg cgcgcttgcc gccgaagggt tcgttgtcgg ctcgaatggc
      421 ctgccgatgc gcgcctccga ggatttcggc cgtttcggcg gctgttcccg cgccgccatg
      481 ttcctgctgg gcgcgggccg cgatgtcgcc agcctgcaca atcccgatta cgatttcccc
      541 gatgacctga tcgaaccggg cgcccgcatc ttcatccgtg cgctgagcga ggtgctgggc
      601 tgagccaggc tacagccgga aacccagggc ctcgatcttc cgggcatagc cttcggacgc
      661 gcgcaggcgg gccagccttt cggcatggcg gaccgtgatc agatcctggg ccgcgcgcac
      721 ggcgggctgt tccatcagcg ccgcgcacag cgcccgcacc cggcccgcca tttcggccgc
      781 gccctcgtcg cgcaggctgt tctgatcata ggtgcggaaa taggcgtcgt catatttgcc
      841 gtgattgttc aggatatcgc cgcgcagccg gcgcatcagg aattcctcgc ccgatttcac
      901 gccgtagtgg ttcaactgcg ccagatcata gccggcctcg tccatcttct gcttccatgc
      961 gatcctgcgc ccgttcagca cctcgcccga gccattcacc gcccgcatct gaagccag
//
LOCUS       DTVW01001115            1020 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2361495, whole
            genome shotgun sequence.
ACCESSION   DTVW01001115 DTVW01000000
VERSION     DTVW01001115.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1020)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1020)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1020
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2361495"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(308..799)
                     /gene="rpsI"
                     /locus_tag="EYO87_14705"
     CDS             complement(308..799)
                     /gene="rpsI"
                     /locus_tag="EYO87_14705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011749244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HIC67219.1"
                     /translation="MAEDIKTLDDLKSAVSDGDLAVAEPAPTREPQRDSLGRAYATGK
                     RKDAVARVWVKPGSGKVTVNGKDINDYFARPVLQMILKQPFDVAGVAGQYDVQATVKG
                     GGLSGQAGAVKHGISQALQLHQPGLRAALKAAGFLTRDSRVVERKKYGRAKARRSFQF
                     SKR"
     gene            complement(802..>1020)
                     /locus_tag="EYO87_14710"
     CDS             complement(802..>1020)
                     /locus_tag="EYO87_14710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002720164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HIC67220.1"
                     /translation="GIKHRTARQILEGAHPERVVTKAVERMISRNKLGKQQMTHLRVY
                     AGTEHPHEAQQPEVLDVKVLNAKNTRSA"
BASE COUNT          161 a          354 c          335 g          170 t
ORIGIN      
        1 ctcccgaaac cccaaagcca aaacccgaag ccccgaacca atcaaaccct caggcccgat
       61 cggtgaaggc gtatctaggc cctgccgacc ggaaccgcaa cagaaaaatg acggcccggc
      121 caaaatttct tgcaactgcc tgatctttcg gcggcctctg tcgcggcagg cgcagcggcc
      181 gcccgcccgt gccggtcggc ccacgcgcga gacggcggcc cggcggcgtc cggaccgcgg
      241 gcgcaaacgc aaaaggcgcg gacctgatgg cccgcgccct gacatgccgg atcgggcgaa
      301 gacccgatca gcgcttcgag aactggaagc tgcggcgggc tttcgcacga ccgtatttct
      361 tgcgctcgac cacccggctg tcgcgggtca ggaaaccggc cgccttcagc gccgcgcgca
      421 ggccgggctg gtgcagttgc agcgcctggc tgatgccgtg cttgaccgcg ccggcctggc
      481 cggacaggcc gccgcccttc accgtcgcct gcacgtcata ctgaccggcg acgccggcca
      541 cgtcgaaggg ctgcttcagg atcatctgca gcaccggacg ggcgaagtag tcgttgatgt
      601 ccttgccgtt cacggtgacc ttgcccgaac cgggctttac ccagacgcgg gcgaccgcat
      661 ccttgcgctt gccggtcgca taggcgcggc ccagcgaatc gcgctgcggc tcgcgcgtgg
      721 gggcgggctc ggccacggcc agatcgccgt ccgagacggc cgacttcaga tcgtcgaggg
      781 tcttgatgtc ttcagccatg atcaggcact ccgggtgttc ttggcgttca ggaccttgac
      841 gtccagaacc tcgggttgct gcgcctcgtg cgggtgctcg gtcccggcat agacgcgcag
      901 atgggtcatc tgctgcttgc ccagcttgtt gcggctgatc atgcgctcga cggccttggt
      961 cacgacacgc tcgggatggg cgccttccag gatctggcgc gcagtgcggt gcttgatgcc
//
LOCUS       DTVW01001116             958 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_236254, whole
            genome shotgun sequence.
ACCESSION   DTVW01001116 DTVW01000000
VERSION     DTVW01001116.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 958)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 958)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..958
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_236254"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..250
                     /locus_tag="EYO87_14715"
     CDS             <1..250
                     /locus_tag="EYO87_14715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011540018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="xanthine dehydrogenase small subunit"
                     /protein_id="HIC67221.1"
                     /translation="FGGMAAIPKRAARAEAALTGQPFAVESFEAAADAVAEDFQPLSD
                     WRASAEYRQAVAANLFRRFWLEQSEPDLPVRLNHAAGV"
     gene            253..>958
                     /locus_tag="EYO87_14720"
     CDS             253..>958
                     /locus_tag="EYO87_14720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011540019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase molybdopterin binding
                     subunit"
                     /protein_id="HIC67222.1"
                     /translation="MKDDTTIRGLAHSETAHDSAIKHVTGRADYTDDLPEPQGLIHAY
                     LGLSECAHGRITGMDFTDTLAHPGVLGVLTAADLPGVNDVSPNGKHDDPVFAQDHVLF
                     WGQPVFAVVAESRDQARRAAQKAQIEYEALPFALDPIAARDAGHDYVTDPLTLRRGDA
                     RAAMATAPRRIKGRFGIGGQDHFYLEGQIAMAVPGEDEDVVINVSTQHPSEVQHMVAH
                     VLDVPSHSVVVNVRRMG"
BASE COUNT          158 a          332 c          310 g          158 t
ORIGIN      
        1 ctttggcggc atggcggcca tcccgaaacg cgccgcccgc gccgaggccg cattgaccgg
       61 ccagcccttc gcggtcgaaa gcttcgaagc ggccgccgat gccgtggccg aagatttcca
      121 gccgctcagc gactggcggg ccagcgccga ataccggcag gccgtcgcgg ccaatctgtt
      181 ccgccgtttc tggctggaac aatccgaacc ggatctgccg gtgcggctga atcacgcggc
      241 aggagtttga cgatgaagga cgacaccacc atccgcggcc tggcccacag cgaaacagcc
      301 catgacagcg ccatcaagca tgtcaccggc cgggccgact acaccgacga tcttcccgag
      361 cctcagggtc tgatccatgc ctatctgggc ctgtcggaat gcgcgcatgg ccggatcacc
      421 ggcatggatt tcaccgacac gctggcccat cccggcgtgc tgggcgtgct gaccgccgcc
      481 gacctgccgg gcgtcaacga tgtctcgccc aatggcaagc atgacgatcc ggtcttcgcc
      541 caggaccatg tgctgttctg gggccagccg gtcttcgccg tcgtcgccga gagccgcgat
      601 caggcccgcc gcgctgcgca gaaggcgcag atcgagtatg aggccctgcc cttcgcgctg
      661 gatccgatcg ccgcccggga tgcgggtcat gattatgtga ccgatccgct gaccctgcgg
      721 cgcggcgatg cccgtgccgc gatggcgacg gcgccgcgtc gcatcaaggg ccgtttcggc
      781 atcggcgggc aggatcactt ctatctcgaa ggtcagatcg ccatggccgt gcccggcgag
      841 gacgaggatg tggtcatcaa tgtctcgacc cagcacccgt ccgaggtgca gcacatggtc
      901 gcccatgttc tggacgtgcc cagccattcg gtcgtcgtga acgtgcgccg catgggcg
//
LOCUS       DTVW01001117            1398 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2362852, whole
            genome shotgun sequence.
ACCESSION   DTVW01001117 DTVW01000000
VERSION     DTVW01001117.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1398)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1398)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1398
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2362852"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..220
                     /locus_tag="EYO87_14725"
     CDS             <1..220
                     /locus_tag="EYO87_14725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008282917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67223.1"
                     /translation="AALAVARGTPFIDIRPVTDVIAFANLPRVARDGSVDPEPWGPGK
                     SVSLITYIDMVEVLGAKIANDPRPRRST"
     gene            260..988
                     /locus_tag="EYO87_14730"
                     /pseudo
     CDS             260..988
                     /locus_tag="EYO87_14730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009807542.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1738 domain-containing protein"
     gene            1163..>1398
                     /locus_tag="EYO87_14735"
     CDS             1163..>1398
                     /locus_tag="EYO87_14735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020818725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrase"
                     /protein_id="HIC67224.1"
                     /translation="MSIISVCERREAGGLAAHVPLILRGDALYDPDLDRFFLDLPLSG
                     IRSRHSLRAQAYDVTVWLRFLDACGKTVWAATRD"
BASE COUNT          249 a          453 c          420 g          276 t
ORIGIN      
        1 ggccgctctt gcggtcgcac gagggacccc gttcatcgat atccgacccg tcaccgatgt
       61 catcgccttc gcgaacctgc cgcgggtggc gcgggacgga tcggtcgacc ctgaaccctg
      121 gggtcctggc aagtccgtct cgctgatcac ctacatcgac atggtcgaag tgcttggtgc
      181 caagatcgcc aacgatccgc ggccccgtcg gtcaacctga tccccaatct tctcaccaaa
      241 actcgaaagg aggccagcca tggcccgatc ccgcacgccc aaattcgatg cctccgaggt
      301 catcacaaac gaaatcatcc gcatcatcga gcgcggcgtc ctgccgtggc gcaagtcctg
      361 gaccgcaggt ggcagctgtc gccccctgcg cgtgggcggg gaaccctacc agggggtgaa
      421 caacttcctg ctgacgatgc ggaccgtgat ggcgggccac agctctccct tctggatgac
      481 gctgccgcag gccaatgcgt tggacgcaaa ggtccgcaag ggcgaaaagt cctctgtcgt
      541 cgtttactac ggtcaaagcc ggagagacgc cggcgatgag catgatcaca gcgacgggga
      601 tgatcactcc gaggaagccc gcatcttccg cttccagaaa tcctaccgcg tgttcaatgc
      661 ctgccagatc gagggcttgc cggacagctt ctatccggac cctgagccct taccccagca
      721 tccgccgtcc gagcccatcc cgcacatgca ggcgtttttc gatgccatcg acatcatgac
      781 cgtcttcacg ggcacggagg cgtactattt gccccccgtg gacaaggtct acatgccatc
      841 cattacgcgg ttccaggacc cgcgcaattt ctacggggtc tgggcccatg agctggccca
      901 tgccacgaaa gccccacatc gactgaaccg tgatttcggg ttctcgaagt ttggcaacac
      961 gtcctatgcg cgcgaggaga tcgtcgcgtt atcttgacag tctgcaccgc atgccacctt
     1021 gccgtaggat gggtgacagg cgttgacggt aggcagtttt caggctggcc gccgcgctta
     1081 ccaaagagct ggcggcggcc agcctgagaa ctgccgggcc gaagcgtgcg ccgggtgggg
     1141 gcatggggag ggttttgcgc tggtgtcgat tatttctgtt tgcgagcgtc gcgaggccgg
     1201 gggtctcgcc gcgcatgtgc cgttgatcct gcgcggcgac gcgctctacg accccgatct
     1261 ggatcgcttc tttctcgacc tgccgctatc ggggattcga tcgcggcatt cgcttcgcgc
     1321 ccaggcctat gatgtgacag tctggcttcg ctttctcgat gcttgcggca agaccgtatg
     1381 ggctgcgacc cgcgacga
//
LOCUS       DTVW01001118            1382 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2363917, whole
            genome shotgun sequence.
ACCESSION   DTVW01001118 DTVW01000000
VERSION     DTVW01001118.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1382)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1382)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1382
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2363917"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..845)
                     /locus_tag="EYO87_14740"
     CDS             complement(<1..845)
                     /locus_tag="EYO87_14740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008885111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-octaprenyl-6-methoxyphenyl hydroxylase"
                     /protein_id="HIC67225.1"
                     /translation="MSFDTDIVIAGGGLNGPTLALALAGAGLSVTVVDPRPAGDRTGE
                     DFDGRAYALALASQRLLSALGLWGDLAGVSQPVRQVKASQGQPGEGAARFLLHFDSAE
                     IEEGPMGHMIEDRFLRHALLAALEAEPLIEHIAPQLVTGQSVVEGHASVSLVDGRELT
                     ARLIVGCDGRKSQTAVRAGIQRTRRSYHQTGLICAISHELPHNGVAHQFFMPSGPLAI
                     LPLPGNRSSIVWTETSVRAETIAAMSDEDYLEELRPRFGDFLGELTLTGARFAYPLDL
                     TLAQS"
     gene            complement(1093..>1382)
                     /locus_tag="EYO87_14745"
     CDS             complement(1093..>1382)
                     /locus_tag="EYO87_14745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010141695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HIC67226.1"
                     /translation="LLSSIEAPRAGAIYNLCDDDPAPPQDVIAHAAELLGMPVPPEIP
                     FDRAEMTPMARSFYADSKRVRNDRIKDELGIGLLYPDYRSGLRALLRDEAG"
BASE COUNT          240 a          449 c          469 g          224 t
ORIGIN      
        1 aaggactggg ctagggtcaa atcgagaggg tacgcgaagc gggcgcccgt cagggtgagc
       61 tcgccgagga aatcgccaaa ccgaggccgg agttcttcta ggtaatcctc gtctgacatg
      121 gcggcgatgg tttcggcgcg tacggacgtt tcagtccaca cgatcgaaga gcggttgccc
      181 ggtaggggca ggatggcgag tgggccggag ggcatgaaga attggtgcgc aacgccgttg
      241 tgtggcagtt cgtggctaat tgcgcaaatg aggcctgttt ggtgatacga tctgcgggtg
      301 cgctggatgc cagcacgcac ggcggtttgg cttttgcggc cgtcgcagcc gacgatgagg
      361 cgggcggtta gttcgcgtcc atccacaagt gaaacggatg catggccctc aactaccgac
      421 tggccagtga ccaattgcgg ggcgatatgt tcaattagtg gttcggcttc cagcgctgct
      481 aaaagggcgt ggcgcaggaa gcggtcctcg atcatgtggc ccatcgggcc ttcctcgatc
      541 tcggcgctgt cgaaatgcag caggaaccgc gcggccccct cgcccggctg gccctgcgag
      601 gccttgacct gccggaccgg ctggctgacg ccggccagat cgccccacaa tcccagcgcc
      661 gaaagcaggc gctgcgaggc cagcgccagc gcataggcac gcccgtcgaa gtcctctccg
      721 gtccggtccc cggccgggcg cggatcgacc acggtcacgg acaggccggc cccggccagc
      781 gccagggcca gcgtcggccc gttcaggccg ccgcccgcga tcacgatatc ggtgtcgaag
      841 ctcatgaccg gcgatcatgc acgggccgcg cgcaaagtcc atgcggcgcg tcggcgccgt
      901 gatgccgggc ggggggcggt taacgatccg tgaaccgaag gtccgcaagc ggtgtacggc
      961 ctgtgcaccc gctgtgccgc cacgctgcgc accctgtgcg acggggtgcc ccgcatttgc
     1021 cgggctttcg gggaattcgc cccgaaaccg catccggcgc aacacaggcc ccgttgcccg
     1081 cgcaacaccg cctcagccag cctcgtcgcg caacagcgcc cgcagcccgc tgcgataatc
     1141 gggataaagc agcccgatcc ccagttcatc cttgatccgg tcgttccgca cccgtttgct
     1201 gtcggcatag aaggatcgcg ccatcggcgt catctcggcc cgatcgaagg gaatttccgg
     1261 cggcaccggc atgcccagca attccgccgc atgggcgatc acgtcctgcg gcggggcggg
     1321 atcgtcgtcg cagagattat agatcgcccc ggcccgcggg gcctcgatcg aggacagaag
     1381 aa
//
LOCUS       DTVW01001119            1612 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2364131, whole
            genome shotgun sequence.
ACCESSION   DTVW01001119 DTVW01000000
VERSION     DTVW01001119.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1612)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1612)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1612
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2364131"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1123)
                     /locus_tag="EYO87_14750"
     CDS             complement(<1..1123)
                     /locus_tag="EYO87_14750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007791781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit B"
                     /protein_id="HIC67227.1"
                     /translation="MADDLLSAADASVESYSASSIEVLEGLEPVRKRPGMYIGGTDER
                     ALHHLVAEILDNSMDEAVAGHASRIEVELLADFSVVVRDNGRGIPIDPHPKFPGKSAL
                     EVILCTLHAGGKFSGDAYATSGGLHGVGASVVNALSDSLVVQVARNKELFEQRFSRGV
                     PEGPVEKIGAAPNRRGTTVTFHADEDIFGHHRFKPARLLKMVKSKAYLFSGVEIRWKS
                     EIDDGETPTEASFHFPGGLADYLSETLAGATSYADRPFAGSVDFKRFDAPGKVDWAIN
                     WTPARDGFIQSYCNTVPTPEGGTHEAGFWAAILKGIRAYGERVSNRKAAQITREDLLT
                     GGCALVSCFIREPEFVGQTKDRLATTEAARLIEGAVRDHF"
     gene            complement(1238..>1612)
                     /locus_tag="EYO87_14755"
     CDS             complement(1238..>1612)
                     /locus_tag="EYO87_14755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HIC67228.1"
                     /translation="AAEDALMMQWSFYAATAIEPDALTILFLHGRDQTQSGEDAAIVA
                     DAAGRLIRPLRVVEDHLGRHSHLIGDRFTVADINLAEVLRYAQSYGALMQEFPAITAW
                     LDACQARPAFRRMWEARLAEPE"
BASE COUNT          268 a          508 c          540 g          296 t
ORIGIN      
        1 cgaaatggtc gcgcaccgca ccctcgatca gccgcgcggc ttcggtcgtg gccaggcggt
       61 ccttggtctg gccgacgaat tccggctcgc ggatgaaaca gctgaccagc gcgcagccgc
      121 ctgtcagcag atcctcgcgg gtgatctggg cggccttgcg gttgctgacc cgttcgccat
      181 aggcgcggat gcccttgagg atcgcggccc agaagccggc ttcgtgggtg ccgccctcgg
      241 gggtggggac ggtgttgcaa taggactgga tgaagccgtc gcgggccggc gtccagttga
      301 tcgcccaatc gaccttgccc ggcgcgtcga agcgtttgaa atcgacgctg cccgcgaaag
      361 gccggtcggc atagctggtc gcgccggcca gcgtttccga caggtagtcg gccagcccgc
      421 cgggaaagtg aaagctggcc tcggtcggcg tctcgccgtc gtcgatctcg gatttccagc
      481 ggatttcgac gcccgagaaa aggtaggcct tggatttcac catcttcagc aggcgcgcgg
      541 gcttgaagcg gtgatggccg aaaatgtcct cgtcggcatg aaaggtgacg gtcgtgccgc
      601 gccggttcgg cgccgcgccg atcttctcga ccggtccttc cggcaccccg cgcgagaatc
      661 gctgctcgaa cagttccttg ttgcgggcga cctgaaccac caggctgtcg gacagcgcgt
      721 tcacgaccga tgcgccgacg ccgtgcaaac cgcccgacgt cgcataggca tcgcccgaga
      781 acttgccccc ggcatgaagc gtgcacagga tcacctccag cgcggatttt ccgggaaatt
      841 tcggatgcgg gtcgatggga atgccgcgtc cgttgtcgcg caccacgaca ctgaaatcag
      901 ccagcagttc gacctcgatc cggctggcat ggccggcgac cgcctcgtcc atcgaattgt
      961 cgaggatctc ggccacaagg tgatgcaggg cgcgttcatc ggtgccgccg atatacatgc
     1021 cggggcgctt gcggaccggt tccagtccct ccagcacctc gatcgaggat gcggaatagc
     1081 tttccacgct ggcatcggcg gcagagagaa ggtcgtcggc catgggctgc tcgtgtttat
     1141 ggctgttttg acgactatct catgtccggg ccgggtgggg caagtggttg tggctttgga
     1201 aacctcggcc gcaaccactt gcgcgggcga tagcgtatca ttccggctcg gccagccgtg
     1261 cctcccacat gcggcgaaag gccggccggg cctggcaagc gtccagccag gcggtgatcg
     1321 cggggaattc ctgcatcagg gcgccgtagg attgggcata gcgcagaact tcggccagat
     1381 tgatgtcggc gacggtaaac cggtcgccga tcagatggct gtgacggccc agatgatctt
     1441 cgaccacgcg caagggccgg atcagcctcc cggctgcatc cgcgacgatg gccgcgtcct
     1501 cgccggattg tgtctggtcg cgtccatgca ggaacaggat cgtcagggcg tcgggttcga
     1561 tggctgtcgc cgcgtaaaag ctccactgca tcatcagcgc atcctcggcg gc
//
LOCUS       DTVW01001120            1244 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2365689, whole
            genome shotgun sequence.
ACCESSION   DTVW01001120 DTVW01000000
VERSION     DTVW01001120.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1244)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1244)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1244
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2365689"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..535
                     /locus_tag="EYO87_14760"
     CDS             <1..535
                     /locus_tag="EYO87_14760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015316757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="gamma-glutamylcyclotransferase"
                     /protein_id="HIC67229.1"
                     /translation="PTQLFAFGSLIWKPEIEHRAEQTGVARGWHRSFCLRQHRFRGTL
                     DQPGLMMALDRGGQCRGVLYELPLENLEHQLDRLFRREFTVKPINNVPRWITVQTASG
                     PVKALGFVMNRASPYYAGSLPPDEVARTLAVACGHWGSGAEYLLNTVTQLEARGIRDS
                     GLWRLQQLVARQIDGLS"
     gene            complement(537..1169)
                     /locus_tag="EYO87_14765"
     CDS             complement(537..1169)
                     /locus_tag="EYO87_14765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019956763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67230.1"
                     /translation="MKLKLEISPDLAALMQAEIAAGEKAVTTAMRDAGTGLKSAWRGQ
                     ITGAGLGTRLGKSIRLATYPKGGESMNAAALVWSNAPVIVGAHDTGPLIRSKNGFWLA
                     IPTPAAGKSTRGGRITPGEWERRTGLRLRFVYRRRGPSLLVAEGRLNTKGRAVESRSK
                     TGRGLVTAPIFLLVPQVKLPKPLDLARDAERAHDAVPGLIVANWVEGKLR"
BASE COUNT          188 a          426 c          415 g          215 t
ORIGIN      
        1 gccgacccag ttgttcgctt tcggctcgct gatctggaag cccgagatcg agcaccgggc
       61 cgagcagacc ggggtcgccc ggggctggca tcgctccttc tgcctgcgcc agcaccgctt
      121 tcgcggcacg ctggatcagc ccgggctgat gatggcgcta gaccgtggcg gccaatgccg
      181 gggcgtcctc tacgaactgc cgttggaaaa cctcgaacac cagctggacc gcctgttccg
      241 tcgcgaattc accgtgaagc cgataaacaa cgtgccccgc tggatcacgg tgcaaacggc
      301 atccggcccg gtgaaggcgc tgggtttcgt gatgaaccgg gcctcgccct actatgccgg
      361 cagtctaccg ccagacgaag tcgcccggac acttgccgtc gcctgcggcc attggggcag
      421 cggcgcggaa tatctgctca acaccgtgac ccagctggag gcgcgtggga ttcgcgacag
      481 cgggctgtgg cgcctgcagc agctggtcgc gcgacagatc gatgggctgt cgtaagtcac
      541 cgcaacttcc cctccaccca gttcgccacg atcaaccccg gcaccgcgtc atgcgcccgc
      601 tccgcatccc gcgccaggtc cagcggcttc ggcagcttga cctgaggcac cagcaggaag
      661 atcggcgcgg tcacgaggcc tcggccggtt tttgaccgtg attccacggc tcggcccttg
      721 gtgttcagcc gcccctcggc caccagcagg ctcgggcccc ggcggcgata gacgaagcgc
      781 aggcgcaggc cggtgcggcg ttcccattcg ccgggggtga tccgaccgcc gcgcgtggac
      841 ttgcctgcgg cgggcgtcgg gatcgccagc cagaagccgt tcttggaacg gatcagcggg
      901 cctgtatcgt gcgcgccgac gatcaccggg gcgttcgacc agaccagcgc agcggcgttc
      961 atgctctcgc cgcccttggg ataggtcgcc agccggatcg attttccaag ccgggtgccg
     1021 aggcctgcgc cggtgatctg gccgcgccac gcggatttga ggcccgtgcc tgcatcgcgc
     1081 atggcggtgg tgacggcctt ttcgccagca gcgatttccg cctgcatcag ggcggcgagg
     1141 tcggggctga tttcaagctt gagcttcatg cgggtctcag atcgagggtc cagatcagcc
     1201 gttcccggtc gcgcagcggc tccccttgga tgacatggct gtcc
//
LOCUS       DTVW01001121            4551 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2366022, whole
            genome shotgun sequence.
ACCESSION   DTVW01001121 DTVW01000000
VERSION     DTVW01001121.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 4551)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4551)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4551
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2366022"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(216..1277)
                     /locus_tag="EYO87_14770"
     CDS             complement(216..1277)
                     /locus_tag="EYO87_14770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010442312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrase"
                     /protein_id="HIC67231.1"
                     /translation="MRHRILASMDLPLAPFSLSSADEAALAELYRRGTPENTLRAWER
                     DLAYIAAWKLARFADDLSWPEAETVALHFVLDHAANLSTEQGPARQAADTLIAAGLRR
                     SLACPAPSTLDRRIASWRAFHRMKNLPSPFDAPLVAQARGRARRAAARPRAPKSGNPI
                     TRAVLEAMLASCDHSHRGMRDRAALMLGWASGGRRRSEIVALNRDDIDDRDFQDKALL
                     RIRLLTTKTTGPETAPRLPLKGRAARAVMAWIAAARIKDGPLFRPVSLADRPLPRRLS
                     ADGFRLIVRHRLELAGYPPDFASAHGLRAGFLTQAALEGAPLVAAMQLSLHRSINQAQ
                     SYYADVEIADNPATDLLED"
     gene            1670..1864
                     /locus_tag="EYO87_14775"
                     /pseudo
     CDS             1670..1864
                     /locus_tag="EYO87_14775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009573623.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(2460..3158)
                     /locus_tag="EYO87_14780"
     CDS             complement(2460..3158)
                     /locus_tag="EYO87_14780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC transporter permease"
                     /protein_id="HIC67232.1"
                     /translation="MTPAHPYLPTLRTALATTALLALGAGAARAHGGGGGVETAVEGM
                     AGFSLSPVYHILVVHFPIALWLTAALFVFFRVFSDSVLAVRLEKSVWPLILLGSLAGF
                     MAYGLGLSIYPWSAITQSPLGRNHIMLATWTLSYWTVLGVLGYRYRSHLFEGAQRWVT
                     FVMTLIGATVVTITGTLGGSLNGTPSLVTKTIGKLGWEVYMTFYLPTWMLWAFGLGAV
                     AIVALGLLGRRAHA"
     gene            complement(3209..4513)
                     /locus_tag="EYO87_14785"
     CDS             complement(3209..4513)
                     /locus_tag="EYO87_14785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018403224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67233.1"
                     /translation="MVRDDPERNIVIPDELNSTLQVKVAYDGETIWFRYRWPAPDPNL
                     INDLLVLENGGWSLRKGSEVGPDPDRLVQDRVAMMVDDGSVPLFSRYGGYITVGDGLT
                     SFTGVPETAEERSKYLPETRAEPNNFDSIRPASELQQLREAGYFLDLWDWQSARTNPL
                     AQAEDTSVGAAREPDAGMAPYISNFDERTGSPRFMFDPDTDPGAPLTVDAATAGEVGF
                     DTAYFLSQAAAVPFDPAAGWQEGDTLPAQVLRAGTGSRADIAMPAAARWRNGFWDVTL
                     QRAMDTGDPLEDKIFREGGSYDLAFAVFRNSATMRWHYVSLPVSLGLDQPAQITARPS
                     PPGQPDFTGPWTEVPIYYPGQVTWGRLTDPRQHPGADRIAARVPAAYQHSERQLALYG
                     IEMEFAPQIRRQWLWTLGLSLSLIVAFGVAMVLLFRRPEGTA"
BASE COUNT          806 a         1439 c         1545 g          761 t
ORIGIN      
        1 cccgttggta tgcgcgcctc tctctcctcc ggcgcgctga ttttccggct gcatggcacc
       61 cggtctgacg agaatggcaa ggcccgtgca ataactcaaa cgcaattaag gaaatgtcgg
      121 atgcatgaaa cttattcctt gcgtcgcgac ggacggcaag cggatgggcg atggacgccg
      181 cggatcgcga cgctgcccgg acaccccgga cggtctcaat cctccagcaa atcggtggcc
      241 gggttgtccg cgatctcgac atcggcgtaa tagctttgcg cctgattgat tgatcggtgc
      301 agcgacaatt gcatcgccgc gaccagcggc gcgccctcca gcgcggcctg ggtcagaaag
      361 cccgcgcgca acccgtgggc gctggcgaaa tcgggggggt agccggccag ttccagccgg
      421 tgccgcacga tcagccggaa accgtcggcc gacagccttc ggggcagcgg gcggtcggcc
      481 aggctgaccg ggcggaacag cggtccgtcc ttgatccggg cggcggcgat ccaggccatg
      541 acggcacggg ccgcgcggcc cttcaggggc aggcgagggg cggtctcggg tccggtggtc
      601 ttggtggtca gaaggcggat ccgcagcagg gccttgtcct gaaagtcgcg atcgtcgatg
      661 tcgtcgcggt tcagcgccac gatttccgac cgtctccgac cgcccgaggc ccagcccagc
      721 atcagcgcgg cacggtcgcg catgccgcga tggctgtggt cgcagctggc cagcatcgcc
      781 tccagcacgg cgcgggtgat cgggtttccc gacttgggcg cacggggccg ggcagcggcg
      841 cggcgggcgc ggccgcgcgc ctgcgcgacc agcggcgcgt cgaagggcga aggaaggttc
      901 ttcatccggt gaaaggcgcg ccagctggcg atgcggcgat ccagcgtgga tggcgccgga
      961 caggcaaggc tgcggcgcag accggcggcg atcagcgtat cggcggcctg ccgcgcgggg
     1021 ccctgttccg tcgacaggtt ggcggcgtga tccagaacga aatgcagcgc gaccgtctcg
     1081 gcctcgggcc aggacaggtc gtcggcaaag cgggccagct tccaggcggc gatataggca
     1141 aggtcgcgtt cccaggcgcg cagcgtgttt tcaggcgtgc cgcgacgata gagttcggcc
     1201 agcgcggcct cgtcggcgga agacagcgag aagggcgcga gaggcagatc catggacgcg
     1261 agaatgcggt gacgcatggg acgcgtcaag aatgcgatga gggggcctgt cgcgggcggc
     1321 ggggcaattt cggtcggggc cgaagcgatc cgcatgcaat ttctttcgtg ccgatcctat
     1381 ctgattcttg tcagcgggtg agtgattctc aacagacaga atcttgcggc cgcgcgaccg
     1441 gcgtgatcca aagcgtctgg aaatctgccc cggtgccaac ggtcaatgcc gatcggagga
     1501 ttttcggtct cacatatcag caaaaaccgg ggttaccggg gggcgagcca tctccggtca
     1561 catcattcgg gcgcttctcg tcctggcgat cttccggaag atattgatca ttattccatt
     1621 tccggcaatc ctggccatat cctggccagg gtcgtcgcgg ggtttcggcg ccgaatacat
     1681 ggatgatccg atgaatccct tcgattttgc ggccgccatg tggcgcggtg ccgaaccgat
     1741 ggtgatgatg cagcaggagg aattgggcgg acagatcgag gttaccgggg acgaacttgc
     1801 ctcgatcatc gcgttcgtcc acgacgccga tgagcagaag aagttcagtg accgcgacat
     1861 accttgcctc gtcgctcgcg cgggcaggct gacctggcaa gccctattcc atcgatggca
     1921 aagcgccgtt ttcgattgcc gccgccagtt cttcggcatc gaccgcgccg tccttgctgg
     1981 tgtccagcgc gtcgtaatcc tgctgtgtca gatcggcata ttcggtctgc atttcagtta
     2041 gcgagtagag cccgtcctga tcggtgtcca tctcgtgggc gaaggctgcg ccggcgatgg
     2101 ccagcagccc ggccgaggcg aagccgatga tgcgtgtcgc gttcattgtc atggtctcct
     2161 gcaaggtgat gatttcgagc ggatcgggat cagaaacccg gccgcgcgga tccgtggcct
     2221 tccggcccgg atcggttcga cacgggggcg cggactgcaa cgggctgcgg gcggacagca
     2281 gcccagagga ccggggcgga cagacccagc gagatcagga tgaagatcat tgtcgtttcc
     2341 tccttttggc gtcgcgccgc ataatctatg aggcgcttga aatgaagacg ctgctcgtca
     2401 cgtccgttac atgaaggcat caggccggac gggcgggccg ggccgcttcg ccgtcgccgt
     2461 cacgcatgcg cccgtcgtcc caagaggccg agcgcgacga tcgccacggc ccccaggccg
     2521 aaagcccaaa gcatccaggt gggcagatag aaggtcatgt agacctccca tcccagcttg
     2581 ccgatggtct tggtcaccag cgacggcgtg ccgttgagcg atccgcccag cgtgccggtg
     2641 atggtcacga cggttgcgcc gatcagcgtc atcacgaatg tcacccaacg ctgtgcaccc
     2701 tcgaacagat gactgcgata acgatagcca agcacgccca gcaccgtcca gtagctcagc
     2761 gtccaggttg ccagcatgat atggttgcgg cccagcggcg actgggtgat ggccgaccag
     2821 ggatagatcg acaatcccag accataggcc atgaacccgg ccagcgagcc cagcaggatc
     2881 agcggccaga ccgatttttc caggcgcacc gcaagcacgg aatccgaaaa cacccggaag
     2941 aagacgaaca gcgccgccgt cagccagagc gcgatcggga aatgcaccac gaggatgtgg
     3001 tagaccggcg aaagcgaaaa tccggccatc ccttcgaccg ccgtttcgac gccgccgccg
     3061 ccgccatgcg cccgcgcggc gccggcgcca agcgccagca gcgcggtcgt ggccagcgcg
     3121 gttcgcagcg tcggcagata tggatgggca ggtgtcatgg tccgttcccc gggttcggat
     3181 atgtggtgat ccgctttgca acgcaggctc atgccgtccc ctccgggcga cggaacagca
     3241 ggaccatggc gacgccgaat gccacgatca gcgacaggct gagccccagg gtccagagcc
     3301 attggcggcg gatctgcgga gcaaattcca tctcgatccc gtaaagcgca agctggcgtt
     3361 cgctgtgctg gtaggcggcc ggcacacgcg ccgcgatccg gtccgcaccg gggtgctggc
     3421 gcgggtcggt caggcgaccc caggtgacct ggccgggata atagatcggc acctcggtcc
     3481 agggaccggt gaaatcgggc tggcccggcg gggacgggcg tgcggtgatc tgcgccggct
     3541 ggtccagccc cagcgagacc ggcaacgaga catagtgcca gcgcatcgtg gccgagttgc
     3601 gaaacaccgc gaaggccagg tcatagctgc cgccctcgcg gaagatcttg tcttccagcg
     3661 gatcgccggt atccatggcg cgttgcagcg tcacgtccca gaacccgttg cgccagcgcg
     3721 ccgcggccgg catggcgatg tccgcgcgcg atcccgtacc cgcccgcagc acctgcgccg
     3781 gaagggtgtc gccctcttgc cagccggcgg ccggatcgaa aggcaccgct gcggcctgcg
     3841 acaggaaata ggcggtgtcg aacccgacct ctccggcggt cgcggcatcg acggtcagcg
     3901 gcgcgcccgg atcggtgtcg gggtcgaaca tgaagcgcgg cgagcctgtc ctctcgtcga
     3961 agttggaaat gtagggcgcc atgcctgcat ccggttcgcg cgccgcgccg acagatgtat
     4021 cctcggcctg cgccagcgga ttggtgcggg cggactgcca atcccacaga tcgaggaaat
     4081 agcccgcctc gcgcagttgt tgcagttcac tggccgggcg gatgctgtcg aaattgtttg
     4141 gctccgcgcg cgtttcgggc aggtatttgc tgcgctcctc cgcggtctcg ggcacgccgg
     4201 tgaagctggt cagcccgtcg ccgacggtga tatagccgcc atagcgcgag aacagcggca
     4261 ccgatccgtc atcgaccatc attgccacgc ggtcctgcac cagccggtcc gggtccggcc
     4321 cgacctcgga ccccttgcgc agagaccagc caccgttttc aaggacaagc aggtcgttga
     4381 tcaggttcgg atcgggcgcc ggccagcgat atcggaacca gatcgtctcg ccgtcatagg
     4441 cgaccttgac ctgcaaggtg ctgttcaatt cgtcgggaat gacgatgttg cgttcgggat
     4501 cgtccctgac gatgccggtg ccatgcgtca gccaggccgc gaccagcagg c
//
LOCUS       DTVW01001122            2428 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2366164, whole
            genome shotgun sequence.
ACCESSION   DTVW01001122 DTVW01000000
VERSION     DTVW01001122.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2428)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2428)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2428
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2366164"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..141)
                     /locus_tag="EYO87_14790"
     CDS             complement(<1..141)
                     /locus_tag="EYO87_14790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008885957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme exporter protein CcmB"
                     /protein_id="HIC67234.1"
                     /translation="MLALLRRDLVLAVRAGGGFGLAVAFFLIISALVPFGVGPGVAAL
                     RPI"
     gene            complement(269..898)
                     /gene="ccmA"
                     /locus_tag="EYO87_14795"
     CDS             complement(269..898)
                     /gene="ccmA"
                     /locus_tag="EYO87_14795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010393860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC exporter ATP-binding protein CcmA"
                     /protein_id="HIC67235.1"
                     /translation="MNLLSVHDLAVSRGGLRAVEGVSFTLAAGRALILRGPNGIGKTT
                     LLRTIAGLQPAVGGRIDMAEDAVAYAAHADGLKGQLSVAENLRFWARVFGGGGTRDAL
                     EAMNLKALAERPAAALSAGQKRRLGLARLLVTGRPLWVLDEPTVSLDSASVERFGAVI
                     RAHLATGGAALMASHTDLGLNEARELDLTPFRARPGSPRRPASFNEAFA"
     gene            complement(895..1251)
                     /locus_tag="EYO87_14800"
     CDS             complement(895..1251)
                     /locus_tag="EYO87_14800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011747733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67236.1"
                     /translation="MMAMRPTDFGGAVAVDGYGPGFFRVGGEVFHGPVLVTDGGGQGW
                     GGLDDTDALLALSGRVDVLFLGMGDQIAHPPRDLVEALEQAGVMVEAMASPTAARTYN
                     VTLGEGRRVACALLPV"
     gene            complement(1248..2228)
                     /gene="secF"
                     /locus_tag="EYO87_14805"
     CDS             complement(1248..2228)
                     /gene="secF"
                     /locus_tag="EYO87_14805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018000462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecF"
                     /protein_id="HIC67237.1"
                     /translation="MAFRLKLVPDETKIDFFRWQVLTFGISSALALLSVVALLIFGLN
                     FGIDFKGGTTIRTESTQPIDVGVYRQALQPLNLGDVSITQVYDPGFRADQYVAQVRIG
                     AQSGAEAVTPQTIEAVQGALKQVDPPITFPSVESVGPKVSAELIRTAVYSVLTALVAI
                     SVYIWLRFEWQFALGAIVSLVHDVLITMGVFAVFQIKFDLTTIAALLTIVGYSINDTV
                     VVFDRLRENLMKYKKRPLRDLMNLSVNETLSRTVMTSGTTLVALIALLVLGGDVIRGF
                     VFAITFGIVIGTYSSIYVAKNVVLWLGVKRDWTKKDPGQDGSPVSGAEAP"
     gene            complement(2230..>2428)
                     /locus_tag="EYO87_14810"
     CDS             complement(2230..>2428)
                     /locus_tag="EYO87_14810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011568718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="protein translocase subunit SecD"
                     /protein_id="HIC67238.1"
                     /translation="SAIVDANITTLIIAAILFVLGSGPVKGFAVTLSIGIVTSVFTAL
                     YVTRLMTVAWFERARPRQIEV"
BASE COUNT          449 a          851 c          791 g          337 t
ORIGIN      
        1 gatgggacgc agggccgcca cgcccggtcc gacgccaaaa ggaaccagcg cactgatgat
       61 caggaagaac gccaccgcaa ggccgaagcc gccgcctgcg cggacagcca gcacgagatc
      121 gcgtctcagc agggcaagca tggatgtttc cgcccctctg ccggcgccgc gccgccggcg
      181 gcggacccgc gcccgcggcc cgcctccggc ccggatcggc atcgccgggt ccggaaggcc
      241 gggcggcgcg cggcttcggc gtcgacgctc atgcgaatgc ctcgttgaaa ctggcgggtc
      301 gtcgcgggct gccgggccgg gcgcggaacg gcgtcaggtc cagttcgcgc gcctcgttca
      361 gcccaaggtc ggtatggctg gccatcagcg ccgcgccccc cgttgccaga tgcgcgcgga
      421 tgacggcgcc gaaacgttcg accgaggcgc tatccagcga gacggtgggt tcgtccagca
      481 cccagagcgg gcggccggtc accagcagcc gcgccagccc cagccggcgt ttctggcccg
      541 ccgacagcgc cgcggccggc cgctctgcca gggctttcag gttcatcgcc tcaagcgcgt
      601 cgcgggttcc gccgccgccg aagacccgcg cccagaagcg caggttctcg gccacgctga
      661 gttgcccctt caggccatcg gcatgggcgg cataggccac ggcatcctcg gccatgtcga
      721 tgcgcccccc gacagccggt tgcagcccgg cgatcgtgcg cagaagcgtc gtcttgccga
      781 tcccgttggg accgcgcagg atcagtgccc tgcccgccgc cagggtgaac gagacgccct
      841 cgaccgcccg caatccgccg cgcgacacgg ccagatcatg gacggacagc agattcatac
      901 cggcagcagc gcacaggcga cccggcggcc ttcgcccagg gtgacgttgt aggttcgcgc
      961 cgcggtgggc gaggccatcg cctcgaccat cacgccggcc tgttccaggg cctcgaccag
     1021 atcgcgcggc ggatgggcga tctggtcgcc catccccaga aacagcacgt ccacgcggcc
     1081 cgacaatgcc agcagcgcat cggtatcgtc cagcccgccc caaccctggc caccgccatc
     1141 ggtgacaagg acggggccgt gaaagacctc gccgccgacg cggaaaaagc cggggccata
     1201 gccgtcgacc gccaccgcgc cgccgaaatc ggtcggccgc atcgccatca gggggcctcg
     1261 gcgcccgaca cgggcgaacc gtcctgaccg ggatccttct tcgtccagtc gcgcttgaca
     1321 cccagccaga gaaccacgtt cttggccaca tagatcgagg aataggtgcc gatcacgatc
     1381 ccgaaggtga tcgcgaagac gaagccgcgg atcacgtcgc cgcccagcac cagcagcgcg
     1441 atcagcgcca ccagcgtcgt gcccgaggtc atcaccgtcc gcgacagggt ctcgttgacc
     1501 gacaggttca tcagatcgcg cagcggccgc ttcttgtatt tcatcaggtt ttcgcgcagg
     1561 cggtcgaaga cgacgacggt gtcgttgatc gaatagccga cgatggtcag aagcgccgcg
     1621 atcgtggtca ggtcgaactt gatctggaaa accgcgaaaa cgcccatcgt gatcagcacg
     1681 tcatggacca gcgagacgat cgccccaagt gcgaactgcc attcgaagcg cagccagata
     1741 tagaccgaaa tcgccaccag cgccgtcagg accgaataga ccgccgtccg gatcagctcg
     1801 gccgagacct tcgggccgac cgattcgacc gacgggaagg tgatcggcgg atcgacctgt
     1861 ttcagcgcgc cctggaccgc ctcgatggtc tgcggcgtga ccgcttccgc gccgctctgg
     1921 gcgccgatgc ggacctgggc cacgtattga tccgcacgga agccgggatc atagacctgg
     1981 gtgatggaca cgtcgcccag attcagcggc tgcagggcct ggcgatagac cccgacatcg
     2041 atcggctggg tcgattcggt gcggatcgtg gtcccgccct tgaagtcgat gccgaaattc
     2101 agcccgaaga tcagcaacgc cacgaccgac agcagcgcca gggccgacga gatgccgaag
     2161 gtcagcacct gccagcggaa aaagtcgatc ttcgtctcgt caggaaccag tttcagacgg
     2221 aaagccatgt cacacctcga tctggcgggg gcgggcgcgt tcgaaccagg cgacggtcat
     2281 cagccgggtg acgtagagcg cggtaaagac cgaggtgacg atgccgatgc tcagcgtcac
     2341 cgcaaagccc ttgaccggcc cggatcccag cacgaacagg atcgccgcga tgatcagcgt
     2401 cgtgatgttg gcgtccacga tggccgac
//
LOCUS       DTVW01001123            1233 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2366316, whole
            genome shotgun sequence.
ACCESSION   DTVW01001123 DTVW01000000
VERSION     DTVW01001123.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1233)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1233)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1233
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2366316"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..376)
                     /locus_tag="EYO87_14815"
     CDS             complement(<1..376)
                     /locus_tag="EYO87_14815"
                     /EC_number="3.5.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007605973.1"
                     /note="catalyzes the hydrolysis of a monocarboxylic acid
                     amid to form a monocarboxylate and ammonia; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HIC67239.1"
                     /translation="MTDPTSLDATDLSAAIADGRLRAETVMTAYLDRIEALNPGLNAI
                     VSLRPRDELLAEARRADTAPRSGWLHGMPVAIKDLAAVKGIRTTWGSPIFADHVPQED
                     DVVVARMRAAGAIFIGKTNTPEW"
BASE COUNT          194 a          406 c          437 g          196 t
ORIGIN      
        1 cccattcggg cgtattggtc ttgccgatga agatcgcccc ggccgcgcgc attcgcgcca
       61 cgaccacatc gtcttcctgc ggcacgtgat cggcaaagat gggcgagccc caggtcgtgc
      121 ggatgccctt gacggcggcc agatccttga tcgcgaccgg catcccgtgc agccagccgc
      181 tgcgcggggc ggtatcggcc cggcgggcct cggccagcaa ttcgtcgcgc ggccgcaggc
      241 tgacaatggc gttgagaccg ggattgagtg cctcgatccg gtccagatac gccgtcatga
      301 cggtctcggc acgaagcctt ccgtcggcga tggccgcaga gagatcggtg gcgtcgagac
      361 tggtcgggtc ggtcatctga tcctttcggg catcatccgg cacagatctg ttgcagcgcc
      421 agccattgct ggtcggtcag cagcggtttc ggcggcgtgg cgctgcggaa gggatcaccc
      481 tcgatcagag gcaggaccga ggctccggtc gggtcgatcg aacgggcata gggctggctt
      541 gagattccga cgcgggcaaa ctgggccagc agcgcctgat cgtcgccccg gcgcgatgcg
      601 tgatttgaca gcaaggtcgg tccatagccg gtcatcgccc cctcgggcag ggaacccagc
      661 gtcatcagcc gcagggcggt tgtcaatccg gcatagccca gggactcctg ccgggcctct
      721 ttgtcggttt cgacctgccg ggcggccaga agatgacccg ccgctgcctc ggggccggag
      781 gcgccgacca gcagatcggc ccccatgacg taaaggtcgc cgggaaggcg cagcgccgtg
      841 ttcaatggtc ccggcacgac gcggatcgcc gcctcgtcgc caagcagtcg tggcgtcagc
      901 cagtccagca ccgcctgtcc ggattggcgt ttgcagaccg cgccggtgct gcgttcgaca
      961 tcggccagaa ccgcctcgcc gatctggcgc gcctgggcgg gcggcgcgat ccgggccgcg
     1021 tggcggacaa gcgtatcggg tagccagaag accagtgcag ccagcatcgc cagaatcgcg
     1081 acgacggtca gcccgtcgcg cagacgcccc ggatgggccc ggcgcgaggc gatggcgcgg
     1141 tgcacacggg cgatggcctc gatcatgacc ggatcctcga tctcgacggt ttcgtcgcga
     1201 tcgtcggggc cgggggaaaa gatggccggg ctc
//
LOCUS       DTVW01001124            1229 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2368374, whole
            genome shotgun sequence.
ACCESSION   DTVW01001124 DTVW01000000
VERSION     DTVW01001124.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1229)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1229)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1229
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2368374"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..923
                     /locus_tag="EYO87_14820"
     CDS             <1..923
                     /locus_tag="EYO87_14820"
                     /inference="COORDINATES: protein motif:HMM:PF02515.15"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HIC67240.1"
                     /translation="VLVENFRPGTLDRMGLDPGALKALNPRLIVASVNGYGSSGPYVD
                     RPAFDFIAQAMSGFMGVNGEPGGPPMRAAAPISDLVAGIYAALGVLAAVIGRERTGQG
                     QAVEVAMVNGLLSLMAYLSSEYFATDAVPQRTGNDHPLVYPYGLFRCADGQVAVANSH
                     DQILQRFLDTLDLGWVMADPRYDSNRKRMAAREELRDLIDSRMEGRSRDHWLAVLNAA
                     GVPCGMVQDLAQVFADPQIAAQQMVIEAPLQDGPALKVLGFPIKLDATPCAVHRPVPK
                     LGGGTRQVLVEAGYSQDEIAALIASGAAAE"
     gene            complement(1031..>1229)
                     /locus_tag="EYO87_14825"
     CDS             complement(1031..>1229)
                     /locus_tag="EYO87_14825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyl transferase
                     subunit alpha"
                     /protein_id="HIC67241.1"
                     /translation="LKKLGVIDRIIPEPVGGAQRMPATAIAAVGKDIAAMLKDLAGRK
                     PADLIRDRRQKFLSMGASSLA"
BASE COUNT          188 a          382 c          449 g          210 t
ORIGIN      
        1 atgtgctggt cgagaatttc cgccccggca ccctggacag gatggggctg gatccggggg
       61 cgctgaaggc gctgaacccc cggctgatcg tggccagcgt caacggctat ggcagcagcg
      121 gcccctatgt cgatcggccc gccttcgatt tcatcgccca ggcgatgagc gggttcatgg
      181 gcgtgaacgg cgaaccgggc gggccgccga tgcgggcggc ggcgccgatc agcgatctgg
      241 tcgcgggcat ctatgcggcg cttggcgtgc tggcggcggt gatcggacgc gaaaggaccg
      301 gccagggtca ggcggtcgag gtggcgatgg tgaacgggct cctcagcctg atggcctatc
      361 tgtcatcgga atatttcgcc accgacgcgg ttccgcagcg gaccggcaac gatcatccgc
      421 tggtgtatcc ctacgggctg tttcgctgtg ccgacggaca ggtcgcggtg gccaattcgc
      481 atgaccagat cctgcagcgg ttcctggaca cgctggatct gggctgggtc atggccgatc
      541 cgcgctatga ctccaaccgc aagcggatgg cggcgcgcga ggaattgcgc gacctgatcg
      601 acagtcggat ggagggtcgc agccgcgatc actggctggc cgtcctgaac gccgccgggg
      661 tgccctgcgg gatggtgcag gatctggcgc aggtctttgc cgatccgcag atcgccgcgc
      721 agcagatggt gatcgaggcg cctttgcagg atggcccggc gctgaaggtt ctgggctttc
      781 cgatcaagct ggacgcgaca ccctgcgcgg tgcatcgccc ggtcccgaaa ctgggcggcg
      841 gaacgcggca ggtgctggtc gaggccggat attcccaaga cgagatcgcg gcgctgatcg
      901 cctcgggtgc ggctgcggaa tagggcgggt cgcgacgcgc aaaaggctgc ggccgggttc
      961 tcgaccggcc ctgtgacgcg acagcggcgg cctgatcgca tcgacggcgg atgatggctt
     1021 cggccctccg tcaggccaga gacgaggccc ccatggacag gaacttctgt cgccggtccc
     1081 tgatcagatc ggcgggcttc ctgcccgcca gatccttcag catcgcggcg atgtccttgc
     1141 ccacggcggc gatggcggtc gcgggcatgc gctgtgcgcc gcccacgggc tcgggaatga
     1201 tgcggtcgat cacgcccagc ttcttcaga
//
LOCUS       DTVW01001125            1516 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2368664, whole
            genome shotgun sequence.
ACCESSION   DTVW01001125 DTVW01000000
VERSION     DTVW01001125.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1516)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1516)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1516
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2368664"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..469)
                     /locus_tag="EYO87_14830"
     CDS             complement(<1..469)
                     /locus_tag="EYO87_14830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005795632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HIC67242.1"
                     /translation="MIPRYSRPDMTAIWSPETKFRIWFEIEAHACDAQADLGVIPREN
                     AEAVWRAKDVQFDVARIDEIEAVTKHDVIAFLTHLAEHVGSDHARFVHQGMTSSDVLD
                     TTLNVQLVRAADILLADLDRVLAALKKRAYEHKNTLRIGRSHGIHAEPVTFGLK"
     gene            610..1314
                     /locus_tag="EYO87_14835"
     CDS             610..1314
                     /locus_tag="EYO87_14835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67243.1"
                     /translation="MHHSEDDPNHLTEADRTSETRFGPRPVPEGHRPPGSHPLRALKA
                     SRRAAARGPSLSAKIIVWGGVGLGVAGVTAGTLMAARKIVGIPESDRPRTGRATIRDD
                     ARLAPRFSALDEDEREAIRRRTREQARQDRAESARLRAEAARDRNPPRRRNAAEELTR
                     TASELSSGLEGVAQSLLTAFQAFRGVAAQASGIVAEFAAAADAVREAVRGNPPPAQQD
                     EASMPRRPDDSRQHRL"
BASE COUNT          253 a          499 c          516 g          248 t
ORIGIN      
        1 gcttcagccc gaacgtcacc ggttcggcat ggatgccgtg gctgcggccg atccgcagcg
       61 tgttcttgtg ttcataggcg cgtttcttca atgccgccag aacgcggtcc agatcggcca
      121 gcagaatgtc ggcggctcgc accaactgga cgttcagcgt cgtgtccaga acgtcggaag
      181 aggtcatgcc ctgatgcacg aagcgggcgt gatcgctgcc gacatgttcg gccagatggg
      241 tcaggaaggc aatcacgtca tgtttggtca cggcctcgat ttcatcgatc cgggcaacgt
      301 cgaactggac gtccttcgcc cgccagaccg cctccgcgtt ctcgcgcggg atcacgccca
      361 gatcggcctg cgcgtcgcag gcatgagcct cgatctcgaa ccagatccgg aacttcgtct
      421 cgggcgacca gatcgcggtc atgtcggggc gggaatagcg cgggatcatg gcgggctcct
      481 tcgtggctgg ctgcggcata gcggggtggc gggccggggg caagatttct gcgcgcgcgg
      541 ctgcggaaca ttcgggcggg gctggcggtt gatcaggcaa gtttttccgc caggacgagg
      601 attgccgcga tgcatcacag cgaagacgac ccgaaccacc tgaccgaagc cgaccgcacc
      661 agcgagaccc gctttggccc ccggccggtc ccagaaggtc atcgcccccc cggcagccat
      721 ccgctgcggg cactgaaagc cagccgccgc gccgccgctc gcggcccgtc gctcagcgcc
      781 aagatcatcg tctggggcgg cgtcgggctg ggcgtggccg gcgtcacggc cggcacgctg
      841 atggcggcgc gcaagatcgt gggcatcccg gaatccgatc ggccccggac gggaagggcc
      901 acgattcgag acgacgccag gctggcgccg cgtttttcgg cactggatga ggatgaacgc
      961 gaggcgatcc gccgtcgcac ccgtgaacag gcccgtcagg atcgcgcaga gtcggcgcgc
     1021 cttcgggccg aggcggcgcg cgatcgcaat ccgccacggc gtcgcaatgc tgccgaggaa
     1081 ctgacgcgga cggcctctga attgtcttcc gggctcgaag gggttgccca atcgctgctg
     1141 acagcattcc aggcctttcg cggtgtggcc gcacaagcca gcggcatcgt cgcggaattc
     1201 gccgccgcgg ccgacgcggt gcgcgaagcc gtgcgtggaa atccgccccc cgcccagcag
     1261 gatgaggctt ccatgccacg caggcccgac gattcccggc agcatcgctt gtgagcgccg
     1321 atccgacagg gcagggttga gcgcatggtg acacagaata ctgatggcag cgaggcgcgc
     1381 agatccgttc tggatgcctt ggttggggaa ctggacgacc agacccgtcg cgattacggt
     1441 ttgccgaccg cctccgggac ggtcgatccc ctcgccatcc cggcaacgat cttctcttcg
     1501 acggcggtct tgaaac
//
LOCUS       DTVW01001126            2509 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2368923, whole
            genome shotgun sequence.
ACCESSION   DTVW01001126 DTVW01000000
VERSION     DTVW01001126.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2509)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2509)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2509
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2368923"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..669)
                     /locus_tag="EYO87_14840"
     CDS             complement(<1..669)
                     /locus_tag="EYO87_14840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018066651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family membrane protein"
                     /protein_id="HIC67244.1"
                     /translation="MARSAALYRMVMPKHLCPYGRKSKWLLEHNGYQVEDHPLRTREE
                     TDDFMRKHEVETTPQAWIDGKRIGGYDDLSAFFGKPLPDAETTSYTPVIAIFAVSALI
                     ALAIFAFAGGPLWMVLPHFAATAMVLLGLQKLQDVESFSTMFLNYDLLAQKWVPYGYV
                     YPFLETGAGLLMIAGLLPWLSGPVALFIGCFGAWSVFRAVYIEKRELKCACVGGNSNV
                     PLGFV"
     gene            complement(722..1189)
                     /locus_tag="EYO87_14845"
     CDS             complement(722..1189)
                     /locus_tag="EYO87_14845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_351917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HIC67245.1"
                     /translation="MSDLDPTDLAILRILASDATTSAARIGRAVGIGQPAAWRRIRKL
                     TDQGILAGRRVVVDNTALGFGVTVFLGVRLATKGRTSLEDFERAVTAIPEVQIVQHVL
                     GQFDYRLRVTARDISDFERILRRRIMTLPGVGQVEANVMLSEERRPGPLGAPD"
     gene            complement(1186..1641)
                     /locus_tag="EYO87_14850"
     CDS             complement(1186..1641)
                     /locus_tag="EYO87_14850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018000437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HIC67246.1"
                     /translation="MHDATDRRILRHLLADPDAPNSDLAQRAGVTQASLWRRLDRMRA
                     TGIIAAIQGRIDWRALGYEVQVSLRFTLDKTDPRAFDDFIAAAREVPEVLEIQTFLGS
                     VDLRLSVIARDMAHWQQIYRDRILRLPHVSDSDALMLVSTIKDSVELAL"
     gene            1769..>2509
                     /gene="ilvC"
                     /locus_tag="EYO87_14855"
     CDS             1769..>2509
                     /gene="ilvC"
                     /locus_tag="EYO87_14855"
                     /EC_number="1.1.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_351915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketol-acid reductoisomerase"
                     /protein_id="HIC67247.1"
                     /translation="MRVYYDRDCDVNLIKDKKVAILGYGSQGHAHALNLRDSGAKNVV
                     IALREGSPSAKKAEAEGLKVMGIAEAAAWCDLIMFTMPDELQAETYRKHVHDNLREGA
                     AIAFAHGLNVHFGLIEPKPGVDVIMMAPKGPGHTVRGEYVKGGGVPCLVAVHNDASGK
                     AMDLGLSYCSAIGGGRSGIIETNFREECETDLFGEQAVLCGGLVELIRMGFETLVEAG
                     YEPEMAYFECLHEVKLIVDLIYEGGIANM"
BASE COUNT          481 a          769 c          818 g          441 t
ORIGIN      
        1 cacgaagccc agcggcacgt tgctgttgcc gccgacgcag gcgcatttca gttcgcgttt
       61 ctcgatatag acggcgcgaa agaccgacca tgcgccgaaa cagccgatga acaaggccac
      121 ggggccggac agccagggca gcagccccgc gatcatcagc agtcccgcgc cggtttcgag
      181 aaacggataa acatagccgt agggcaccca tttctgggcc agcagatcgt agttcaggaa
      241 catcgtggaa aaactttcca cgtcttgcag tttttgcaga cccagcagga ccatcgcggt
      301 tgcggcgaaa tgcggcagca ccatccagag cggcccgccg gcgaaggcga agatcgccag
      361 cgcgatcagc gccgagacgg cgaagatggc gattaccggc gtgtagctgg ttgtttccgc
      421 gtcaggcaga ggcttgccga agaaggcact gagatcatca taaccgccga tccgcttgcc
      481 gtcgatccag gcctgcgggg tcgtctcgac ctcatgtttc cgcatgaaat cgtcggtttc
      541 ctcgcgggtg cgcagcgggt gatcctcgac ctggtagccg ttatgttcca gcagccactt
      601 ggacttgcgg ccataggggc agagatgctt gggcatgacc attcggtaaa gggcggcgct
      661 tcgggccatg gcattctcct tggactgaac cttgggtcca acgcaccggg ccgcgattcg
      721 ttcagtcggg cgcgcccagc ggacccggtc ggcgttcttc ggacagcatc acattcgcct
      781 cgacctgccc gacgccgggc agggtcatga tccggcgacg caggatgcgt tcgaaatcgg
      841 atatgtcgcg ggcggtgacg cgcaggcgat agtcgaactg gccaaggacg tgctggacga
      901 tctggacctc ggggatcgcg gtcacggcgc gttcgaaatc ttccaggctt gttcggccct
      961 tggtggcaag ccgcacaccc aggaataccg tcaccccgaa accgagggcg gtgttgtcca
     1021 ccaccacgcg ccgcccggca agaatgccct gatcggtcag cttgcggatg cgccgccatg
     1081 cggcgggctg gccgatgccg accgcgcgcc cgatccgggc ggcgcttgtg gtcgcgtcag
     1141 aggcgaggat gcgcaggatc gccagatcgg tcgggtccag gtcgctcaca gcgccagctc
     1201 cacgctgtcc ttgatcgtcg acaccagcat caacgcgtcg ctgtccgaga catgcggtag
     1261 ccgcaggatc cggtcgcgat agatttgctg ccaatgcgcc atgtcccgcg cgatcaccga
     1321 cagacgcaga tcgacgctgc cgaggaaggt ctggatttcc aggacctcgg gcacctcgcg
     1381 ggcggcggcg atgaagtcgt cgaaagcgcg cggatcggtc ttgtccagcg tgaagcgcag
     1441 gctgacctgc acttcgtagc caagcgcgcg ccagtcgatg cggccctgga tcgccgcgat
     1501 gatccctgtc gcgcgcatcc tgtccagccg ccgccacaag ctggcctgcg tgacgcccgc
     1561 ccgctgcgcc agatcgctgt tcggggcgtc gggatcggcc agaagatggc gcaggatgcg
     1621 gcggtcggtg gcgtcgtgca tgaattattc acatgaaggg tcaacaggca tgatcttcgc
     1681 gctttattgc catatttcga tcagaatgac caaacgtctt gtcccgattg atcgtaaaac
     1741 ccgctgatcg agaggaaagg aagaaccgat gcgtgtttac tatgaccgcg attgtgacgt
     1801 gaacctgatc aaggacaaga aggtcgcgat cctgggctat gggtcgcaag gccacgccca
     1861 tgccctgaac ctgcgcgatt ccggcgccaa gaacgtcgtc atcgccctgc gcgagggcag
     1921 cccctcggcg aagaaggccg aggctgaggg cctgaaggtc atgggcatcg ccgaggcagc
     1981 cgcctggtgc gatctgatca tgttcaccat gccggacgaa ttgcaggccg agacctaccg
     2041 gaaacacgtt cacgacaatc tgcgtgaggg cgcagcgatc gccttcgccc acggtctgaa
     2101 cgtgcatttc ggcctgatcg agccgaagcc cggtgtcgat gtgatcatga tggcccccaa
     2161 gggccccggc cacaccgtgc gcggcgaata cgtcaagggc ggcggcgtgc catgcctggt
     2221 cgcggtgcac aacgacgcgt cgggcaaggc gatggatctg ggcctgtcct actgctcggc
     2281 catcggcggc ggccgttcgg gcatcatcga gaccaatttc cgcgaggaat gcgagaccga
     2341 cctgttcggc gaacaggcgg tgctgtgcgg cggtctggtc gaactgatcc gcatgggatt
     2401 cgagacgctg gtcgaggccg gctacgagcc ggagatggcc tatttcgaat gcctgcacga
     2461 ggtaaaactg atcgtggacc tgatctatga gggcggcatc gccaacatg
//
LOCUS       DTVW01001127            1375 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2369298, whole
            genome shotgun sequence.
ACCESSION   DTVW01001127 DTVW01000000
VERSION     DTVW01001127.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1375)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1375)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1375
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2369298"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..571
                     /locus_tag="EYO87_14860"
     CDS             <1..571
                     /locus_tag="EYO87_14860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005850616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TAXI family TRAP transporter solute-binding
                     subunit"
                     /protein_id="HIC67248.1"
                     /translation="FDDLKGKRVNVGNPGSGQLATMEVVLKAKGWTMNDFALASQLKP
                     AEQSAALGDNKVDAIVYTVGHPNGSIQEATSTVDANLVPVEGPEIDKLVKENPYYAKA
                     TIPGGMYPGTDNDTNTFGVKATFVTSADVPEDVVYEVVKAVFDNFDRFKKLHPAFANL
                     DPKEMVTEGNSAPLHPGAEKYYREQGWIQ"
     gene            661..1375
                     /locus_tag="EYO87_14865"
                     /pseudo
     CDS             661..1375
                     /locus_tag="EYO87_14865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005854584.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
BASE COUNT          259 a          418 c          440 g          258 t
ORIGIN      
        1 cttcgacgat ctgaagggca agcgggtcaa cgtgggcaat cccggttcgg gacaattggc
       61 cacgatggag gtcgtgctga aggccaaggg ctggacgatg aacgacttcg cgctggcctc
      121 gcaattgaag ccggcggaac aatccgcggc gttgggcgac aacaaggtcg atgcgatcgt
      181 ctataccgtc ggccatccga atggctcgat ccaggaggcg acctcgaccg tggacgccaa
      241 tctggtcccg gtcgagggcc ccgagatcga caagctggtc aaggagaacc cctattacgc
      301 caaggcgacc attccgggtg gcatgtatcc gggaaccgac aacgatacca acaccttcgg
      361 cgtcaaggcg accttcgtga cctcggccga cgtgcccgaa gacgtggtct acgaggtggt
      421 gaaggcggtc ttcgacaatt tcgaccgatt caagaagctg catccggcct tcgccaatct
      481 cgatcccaag gagatggtca cggaaggcaa cagcgcgccg ctgcatccgg gggccgagaa
      541 atattacagg gaacagggct ggatccagta attccggcgc aagtcacggg cggccctgcc
      601 ggggccgccc atcgctcttg accataacga caacaagccc agacaacggg ggatgctgcg
      661 atgagcgaga cggatcggga caagtcccac aaggacgacc agttcgaggc cagcgccgtc
      721 gagatggccg cctcgggcca tggcggcctg tcgcagcagg aaatcgacga gctcgtcgca
      781 tcctccgata ccggggcacg gacgccgccc ggcttcgtgg gcaagctgat cctgatgacc
      841 gcgctggctt ggtcgtcctg ttcatcatgg gatccaagac cggcgtgccg gtctggtgga
      901 tccccatcgt cggcgccgcc gtcatcgccg cgatcctgct gggcagtccc aagtcgtggg
      961 tgccgccctg ggaatgggcg ctggccatcg tcgcggccat tgccgcgctt tacatctatt
     1021 tcgcctatga cgggatttcg tcccgcgtgg gcgcgccgat catgcaggat tacgtgattt
     1081 ccgtcatcgg gatcattctg ctgctggagg ccacccgacg cagcctgggt ccggcgctga
     1141 tgatcgtggc gtcggtgttt ctggtctata cctttcttgg cccctacatg ccggacatca
     1201 tcgcccacaa gggcaattcg ctggcggaag tggtcaatca ccaatggatc acgaccgagg
     1261 gcgtgttcgg catcgcgctt ggcgtttcga ccagtttcgt gttcctgttc gtgctgttcg
     1321 gggcgctgct ggacaaggcc ggggcgggca actacttcat ccaggtggca ttctc
//
LOCUS       DTVW01001128            7727 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2369553, whole
            genome shotgun sequence.
ACCESSION   DTVW01001128 DTVW01000000
VERSION     DTVW01001128.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 7727)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7727)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7727
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2369553"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..200)
                     /locus_tag="EYO87_14870"
     CDS             complement(<1..200)
                     /locus_tag="EYO87_14870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010394115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3168 domain-containing protein"
                     /protein_id="HIC67249.1"
                     /translation="MSYAASVALQGAVYQRLRADAVLSELVGDAIYDAMPVDAPSGVF
                     VSLGPEEVRDAGDFDRAGSQHD"
     gene            complement(197..535)
                     /locus_tag="EYO87_14875"
     CDS             complement(197..535)
                     /locus_tag="EYO87_14875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="head-tail adaptor protein"
                     /protein_id="HIC67250.1"
                     /translation="MGAPRLNVRLALEAPERQSDGLGGYRVVWRQLGFLWAELDSGSG
                     RRRSAEVGAESVVSWKITVRSAATGDPRRPAPGQRLRLDRRFFRIDAVAERDRDGLWL
                     TCFAREEDQA"
     gene            complement(535..1149)
                     /locus_tag="EYO87_14880"
     CDS             complement(535..1149)
                     /locus_tag="EYO87_14880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010442104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67251.1"
                     /translation="MMLIEETAPAAEALPVAALREHLRLGSGFEIAEDNAETAALTGY
                     LRAAIAAIEARTGKVLLTRRFRMQLDDWRDRLGQTLPLAPVVTVDRIEIDDGAGTVTT
                     LQPDGWRLLPDMQRPTILPAGVILPNVPRRGFLTITFTAGFGDTWASVPADLSQAVLM
                     LATRYYEDRSFEGSANAMPFGVSALIERWRQIRTLAGRGQREVR"
     gene            complement(1343..2506)
                     /locus_tag="EYO87_14885"
     CDS             complement(1343..2506)
                     /locus_tag="EYO87_14885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008183758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage major capsid protein"
                     /protein_id="HIC67252.1"
                     /translation="MTEVKAAGGGDASADLKGAMTGFVSELRGFRDDIQKKLNAQEER
                     MNMLDRKTAIRGRAPLSTVAETEVPHQKAFNAYLRSGDDDGLRGLAVEEKGLSVASDG
                     GFLAAPQVADSVQSVLSTGASLRKLANVVTVESSAYEVLVDKGDMGAGWADEAEPVES
                     GAGGVERISIPVHELSAMPKASQRLLDDAAFDVEAWLAERIADKFARSEAAAFISGDG
                     VSKPKGILAYPTAPNDSAGAGEIGVIGTGAIGEFNSAAPADPLIDLIYALPAEYRANA
                     SFVMNSKTAAQVRKMKDADGRFLWSDALAAGQVPQLLGYPVLISEDMPDIGFDALAIA
                     FGDFHAAYTIVERPDLRVLRDPFSAKPHVLFYATKRVGGGVTDFRAVKFLQFA"
     gene            complement(2635..3165)
                     /locus_tag="EYO87_14890"
     CDS             complement(2635..3165)
                     /locus_tag="EYO87_14890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HK97 family phage prohead protease"
                     /protein_id="HIC67253.1"
                     /translation="MVPGLEVKFAGGAPVLSEGHVIEGYASLFGMTDQGGDAVLPGAF
                     AASLKKLAGKGDKVRMLWQHDPTRPIGVWDEIREDQTGLWVKGRLLREVAQAREAAAL
                     IQAGAIDGLSIGYRTIRAERDQKGRRALAEVELWEVSLVTFPMLPEAKVGRKETDDLR
                     EIAALFSAAVEALRAD"
     gene            complement(3169..3399)
                     /locus_tag="EYO87_14895"
     CDS             complement(3169..3399)
                     /locus_tag="EYO87_14895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010394124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67254.1"
                     /translation="MEGSRFIEAGLWRDQRFEAQERIMALQFGTVEKRLERIEALMEG
                     LERRLWMTVYGVVAVILTQAIQGIIDYVPKGG"
     gene            complement(3404..4588)
                     /locus_tag="EYO87_14900"
     CDS             complement(3404..4588)
                     /locus_tag="EYO87_14900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010138007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage portal protein"
                     /protein_id="HIC67255.1"
                     /translation="MAFRLFSREETSIPAPERKASATGRVVAFASGAGRPIWSARDTG
                     SLTRGGFMGNPVGFRSVKLIAEAAAAVPLVCEDRERRYDVHPVLDLLRRPNPGQGRAE
                     LFEALFGQLLLSGNGYVEAVGLSGAGLPEELHVLRSDRMSIVPGTDGWPVAFEYSVGG
                     RKHRFDMTGSPDPICHIKSFHPQDDHYGLSPMQAAAVALDVHNSASAWSKALLDNAAR
                     PSGAIVYKGVDGQGVLSPEQYDRLVGEIEMNHQGARNAGRPMLLEGGLDWKPMGFSPS
                     DMEFHETKLSAAREIALAFGVPPMLLGIPGDATYANYAEAHRAFYRLTVLPLATRVSA
                     SVAWWLSEHMGTEVDLRPDPDRIPALAEERDQQWARIGGASFLSDAEKRALLGLPPLT
                     DG"
     gene            complement(4703..6154)
                     /locus_tag="EYO87_14905"
     CDS             complement(4703..6154)
                     /locus_tag="EYO87_14905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015500384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HIC67256.1"
                     /translation="MRSIICCRKGAALTNFARTSPAGSEEAASTLTRQELRSGAAWLA
                     SAEPEEVDEFLEGLGENALMALPWLFEFWALPHQLPPEGDWKSWVIMGGRGAGKTRAG
                     SEWVRRMVEGPTATAPGQCQRVALVGETFDQAREVMVMGESGILACSPPDRRPVWETG
                     RRRLVWANGATATVYSAHEPEALRGPQFDAAWVDELAKWKKADDTWDMLQFALRLGSH
                     PQQVVTTTPRNVAVLKRILGNASTVTTHAPTDANRAYLAESFLAEVEARYGGTRMGRQ
                     ELEGVLLDDIEGALWTTAMLEGARIEQAPKLSRVVVAVDPAVTAGRASDECGIVVAGV
                     VCDGEPKDWRAYLLEDATLRGSPVDWARAAIAAMDRHGAEKLVAEVNQGGDLVESVIR
                     QVDPLVPFKALRAGRGKGLRAEPVAALYEQGRIRHVRSGNLGALEDQMCQMTVRGYEG
                     RGSPDRLDAMVWAIHELMIEPAAGWRRPQMRRL"
     gene            complement(6708..7145)
                     /locus_tag="EYO87_14910"
     CDS             complement(6708..7145)
                     /locus_tag="EYO87_14910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67257.1"
                     /translation="MMKFSDMFATLADNARRMEERAAEWQNQMNVKNDEMMASTRKWQ
                     ETALQRQDEMNAQMRSYFEEAGENVRGQLQVMQSAWEEQFQKMREKSEEMREQAMKGG
                     HFPDWAEAYAAQMVSFAQRMQDEASNAIAAATEARAKDGKKKG"
     gene            7516..>7727
                     /locus_tag="EYO87_14915"
     CDS             7516..>7727
                     /locus_tag="EYO87_14915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67258.1"
                     /translation="MFIPFLDALRRQGVPVSLREWLDLMAGMQAGIAAGRVEDFYHFA
                     RLALVATQRSDDETRVGSLGQMLRLG"
BASE COUNT         1308 a         2852 c         2242 g         1325 t
ORIGIN      
        1 aaatcgtgct gggatccggc gcgatcgaaa tcgccggcat cgcgcacctc ttcgggaccc
       61 agcgagacga agaccccgct gggcgcatcg accggcatcg cgtcataaat cgcgtctccg
      121 accagttcgg acaacactgc gtcggcccgc agtcgctgat agaccgcgcc ctgaagggcg
      181 acggaagccg cataactcat gcctgatcct cctcgcgcgc aaaacatgtc agccacaggc
      241 cgtcacggtc ccgctcggcg accgcatcga tccggaagaa ccggcgatcc agccgcaacc
      301 tctgtccggg tgccggccgc cttggatcgc ccgtcgccgc agaccgcacc gtgatcttcc
      361 aggatacgac gctttccgcg cccacctctg ccgaccgccg ccgccccgaa cccgaatcca
      421 gttcggccca cagaaatccc agttgccgcc agaccacgcg ataaccgccc agcccgtcgc
      481 tctgacgctc tggcgcttcc agcgccaggc gcacgttcag cctcggcgcg cccatcaacg
      541 cacctcgcgc tgaccgcgcc ccgccagggt gcggatctgg cgccagcgtt cgatcagtgc
      601 gctgaccccg aagggcatcg cattcgccga tccctcgaag ctgcgatcct cgtagtatcg
      661 cgtggccagc atcagaaccg cctgcgacag atcggccggc accgaagccc aggtatcgcc
      721 gaaccctgcc gtgaaggtaa tcgtcagaaa gccccggcgc ggcacgttgg gcagaatgac
      781 acccgccggc agaatggtcg ggcgctgcat gtcgggcagc agccgccagc cgtcgggttg
      841 cagcgtcgtt accgtgccgg ccccgtcatc gatctcgatc ctgtcgaccg tgaccacggg
      901 cgccagcggc agcgtctgtc ccagccggtc gcgccaatcg tccagttgca tccgaaaacg
      961 ccgcgtcagc aggaccttgc ccgtgcgcgc ctcgatcgcg gcgatcgcgg cgcgcagata
     1021 gcccgtcagc gccgccgttt ccgcattatc ctcggcaatc tcgaaacccg agccgaggcg
     1081 caaatgctcg cgcaaggcgg cgacaggcag cgcctccgcc gcgggcgccg tttcctcaat
     1141 cagcatcatc ttgcgaacct cccgtcctgc cgtccgccat tcgttccacc gaggcggggc
     1201 ccgaccatgg gccccgccat tgcttcaggc gggaaaggac cgcgcccgcg cgccagccat
     1261 cagcacgcgc ggacagttgc aaagccagca tgaccggcac gcgacccgcg cgcggcccct
     1321 tccctcgccc gaccccgaag gatcaggcga actgcaggaa cttgaccgcg cggaagtcgg
     1381 tgacgccgcc gccgacgcgc ttggtcgcat agaacagaac atgcggcttg gcgctgaacg
     1441 gatcgcgcaa cacgcgcagg tcgggacgct cgacaatggt gtaggcggca tggaaatcgc
     1501 cgaaggcgat ggccagggcg tcaaagccga tatccggcat gtcctcgctg atcagaaccg
     1561 gatagcccag aagctgcggc acctgaccgg cagccagggc gtcgctccac agaaagcgcc
     1621 catcggcatc cttcatcttg cgaacctgcg ctgccgtctt cgaattcatc acgaagctgg
     1681 cattggcgcg atattccgca ggcagggcat agatcaggtc gatcagcgga tcggccggcg
     1741 cggccgagtt gaactcgccg atcgcgcccg tgccgatgac gccgatctcg cccgcgccgg
     1801 cgctgtcgtt cggcgccgtc ggataggcca gaatgccctt cggcttcgat acaccatcgc
     1861 ccgaaatgaa ggctgctgct tccgaacgcg cgaacttgtc ggcgatccgc tcggccagcc
     1921 atgcctcgac gtcgaaggcg gcatcgtcca gcaggcgctg actggccttc ggcatcgccg
     1981 acaattcgtg aaccgggatc gagatccgtt cgacaccgcc ggcgccggac tcgaccggct
     2041 cggcctcgtc ggcccagccc gcacccatgt cacccttgtc caccagaacc tcgtaggccg
     2101 aggattcgac ggtcacgaca ttggccagct tgcgcagcga cgcaccggtg gagagcaccg
     2161 attgcacgct gtcggcgacc tggggggccg ccaggaaacc accgtcgctg gccacgctca
     2221 gccccttttc ctcgaccgca aggccgcgca gaccgtcgtc atcgccgctg cgcagatagg
     2281 cgttgaatgc cttctgatgc ggaacctcgg tctcggccac ggtcgaaaga ggcgcgcggc
     2341 cccgaatggc ggtcttgcga tcaagcatgt tcatacgctc ttcctgtgca ttgagcttct
     2401 tctgaatgtc gtctcggaac cctctgagtt cgctcacgaa ccctgtcatg gcccctttca
     2461 gatcggcgga cgcgtcaccg ccgcccgcgg ccttcacctc ggtcataatc ttctcctcat
     2521 cgcgatgatc ggggccgatc cgcccctgct gccgggtcag gaacgacccg aacccgaatg
     2581 atgcgtcccg gcgcatcttg ccgcggccgc gccgatgcgg cgcgaccccg gatttcagtc
     2641 tgcccgcagc gcctcgacgg ccgccgaaaa cagcgccgcg atctcgcgca gatcgtccgt
     2701 ttccttgcgg ccgaccttgg cctcgggcag catcggaaag gtcaccagcg acacttccca
     2761 caattcgacc tcggccaggg cgcggcgccc tttctgatcg cgctcggcgc ggatcgtgcg
     2821 atagccgatg gacaggccat cgatcgcacc ggcctgaatc agcgccgccg cttcgcgggc
     2881 ctgcgcgacc tcgcgcagca ggcgaccctt gacccacagc cctgtctgat cctcgcggat
     2941 ctcgtcccag acaccgatgg gccgtgtcgg atcgtgctgc cacagcatcc gaaccttgtc
     3001 gcccttgccc gccagcttct tcagcgaggc tgcgaaggcg cccggaagaa ccgcgtcgcc
     3061 gccctgatcc gtcatcccga acaggctggc atagccttcg attacatggc cttcgctcag
     3121 gaccggagcc ccgcccgcga atttcacctc aagtcccgga accatccctc agcctccttt
     3181 gggcacgtag tcgattattc cctgaatggc ctgggtcagg atgacggcga cgacgccgta
     3241 aaccgtcatc cacagccgcc gctccaggcc ctccatcagc gcctcgatgc gctccagccg
     3301 cttctcgacg gtgccgaatt gcagcgccat gatccgctcc tgcgcctcaa atcgctggtc
     3361 gcgccacaag cccgcctcga tgaaacgcga tccttccatc ggctcaccca tcggtcagcg
     3421 gaggcagccc cagcagcgcc cgcttttcgg catcgctgag aaaactcgcc ccgccgatcc
     3481 gggcccattg ctgatcccgc tcttctgcca aggccggaat tcggtcggga tcgggacgca
     3541 gatcgacctc ggtgcccata tgctcagaga gccaccaggc cactgacgcg gacacccgcg
     3601 tcgccagcgg cagaacggtc agccgataga aggcccggtg cgcctcggca tagtttgcat
     3661 aggtcgcatc cccggggatc cccagcagca tgggcggaac gccaaaggcc agcgcgatct
     3721 cgcgcgccgc cgacagcttg gtttcatgaa actccatgtc gctggggctg aatcccatcg
     3781 gcttccagtc cagcccgcct tccagcagca tcggtcgccc ggcattgcgt gcgccctgat
     3841 ggttcatctc gatctcgccg accaagcggt catattgttc ggggctcaga accccctgcc
     3901 cgtcgacgcc cttgtagacg atggcgccac ttggcctcgc ggcgttgtcc agcagcgcct
     3961 tggaccaggc gctggcgctg ttatgcacat ccagcgccac cgccgctgcc tgcatcggcg
     4021 acaatccgta gtgatcgtcc tgcggatgaa agctcttgat gtggcagatc ggatcggggc
     4081 tgccggtcat gtcgaaacga tgcttgcgcc cgccaacgga atattcgaac gccaccggcc
     4141 agccatccgt gccgggaacg atgctcatcc ggtccgaacg cagaacatgc agttcttccg
     4201 gcagccccgc cccggacaat ccgaccgcct cgacatagcc gttgcccgac agcagcaatt
     4261 gcccgaagag ggcttcgaac aattccgccc gtccctggcc cgggttggga cgtcgcagca
     4321 gatccagcac cggatgcacg tcatatcgcc gctcgcgatc ctcgcagacc agcggcaccg
     4381 ccgccgccgc ctcggcgatc agcttgaccg accggaaccc gaccggattg cccatgaaac
     4441 cgccgcgcgt cagcgacccg gtatcacgtg ccgaccagat cggccgtccc gctccggacg
     4501 caaaggccac cacccggccc gtcgcgctgg ccttcctctc cggtgcggga atggatgtct
     4561 cctcccgcga aaacaatcga aacgccatgc tcgcctccat gcctcggcca tgaaaaaggg
     4621 ccggcccgca ggccagcccc ttcttcgttg tccaaatacc ccgggggacg ccggttcgtg
     4681 cgtgtgaaac ccccgccttt tctcacaatc gccgcatctg cggccgccgc cagcccgccg
     4741 ccggctcgat catcagctcg tgaatcgccc agaccatcgc atccagccga tccggagagc
     4801 cgcgtccctc atagccgcga accgtcatct ggcacatctg gtcctccagc gcgcccagat
     4861 tgccggaccg gacatgcctg atgcgcccct gttcatacag cgcggcgacc ggttcggcac
     4921 gcaggccctt gccgcggccg gcgcgcagcg ccttgaacgg caccagggga tcgacctgcc
     4981 ggatcacgct ttcgaccaga tcaccgccct gattgacttc ggccaccagc ttttcggccc
     5041 cgtgccggtc catcgcggca atcgcggcac gcgcccagtc caccgggctg ccccgcagcg
     5101 tcgcatcctc cagcagatag gcccgccaat ccttcggctc gccgtcgcag acgacaccgg
     5161 cgacgacgat gccgcattcg tcgctggccc ggccggccgt caccgccgga tcgacggcaa
     5221 ccacgacgcg gctcagtttc ggcgcctgct cgatacgcgc gccctccagc atcgccgtcg
     5281 tccaaagtgc gccctcgata tcgtccagca gcacgccctc cagctcctgc cgacccatcc
     5341 gggtcccgcc atagcgggcc tcgacctcgg ccagaaagct ctcggccaga taggcccggt
     5401 tggcatcggt cggcgcatgc gtcgtgacgg tgctggcatt gcccagaatg cgcttcagca
     5461 cggccacatt gcgcggcgtc gtggtcacga cctgctgcgg atggctgccc aggcgcaacg
     5521 cgaattgcag catgtcccag gtgtcgtcgg ccttcttcca cttggccagt tcatccaccc
     5581 aggccgcatc gaattgcggg ccgcgcaaag cctcgggctc atgcgcggaa tagaccgtcg
     5641 ccgtcgctcc attggcccag accagccgcc gccgcccggt ttcccagacc ggcctgcggt
     5701 cggggggcga acaggccagg atcccgctct cgcccatgac catcacttcg cgggcctgat
     5761 cgaaggtctc gccgaccagt gccacccgct gacactgacc gggcgcggtg gcggtcggac
     5821 cctcgaccat gcggcggacc cattccgagc cggcgcgggt cttgcccgcg ccgcgcccgc
     5881 ccatgatgac ccagcttttc caatcgccct cgggcggcaa ctgatgcggc agggcccaga
     5941 actcgaacag ccagggcagc gccatcagtg cgttttcgcc cagcccttca agaaattcgt
     6001 caacctcctc cggctcggcg gaggcaagcc aggcggcgcc cgatctcagt tcttgccgcg
     6061 tcaaggtcga ggcagcctcc tccgaccccg ccggcgatgt ccttgcgaag tttgtcaacg
     6121 cggctccttt ccgacaacat atgattgacc gcatcgcgca ccgcccgtgc gctgtggatc
     6181 gcggtcttca gttcaccagg atcgacagca ccccgctcgc gttcctccag cgcgtccgta
     6241 tggcgccgca ggtccctgat gcaggacgca agctgtccct gtgcttcggc cagcagatct
     6301 tccagatccg cggtccgccg gtcttcttcg gcctggtccg cagcgcgatc ggtgacatgc
     6361 gcatcggccg tgactggccc ttcaggatca ccgatcccgc tccattccat atcgttcatg
     6421 caaactgtcc cgcctcgtgt cctgtccgca cgagccaaga aacgaaaaag cggccctggg
     6481 gtcgcccccc ggccgcttgc ccatttctcc cagcatggaa aacttctact tcagggcgtc
     6541 cggtaagtca atcgctaaac catagcgcga tcactttacc aagtcttatg catcgaaaac
     6601 aatgccttaa gacaggcaac acccatgcgt tcgcagcgca acaccgcgcg tgacatcacg
     6661 caaagccaag gccggaaggc cgcgatcgca cgggaaagag gctgccctca gcccttcttc
     6721 ttgccgtcct tggcgcgcgc ctcggtcgcg gccgcgatgg cgttgctggc ctcgtcctgc
     6781 atccgttgcg caaaggacac catctgcgcg gcataggcct cggcccagtc agggaaatga
     6841 ccgcccttca tcgcctgttc gcgcatctcc tcgctcttct cgcgcatctt ctggaactgc
     6901 tcttcccagg ctgattgcat cacctgcagc tggccgcgga cattctcgcc cgcctcttcg
     6961 aaatagctgc gcatctgcgc gttcatctcg tcctggcgct gcaaggcggt ttcctgccat
     7021 ttgcgggtgc tggccatcat ctcgtcattc ttgacgttca tctggttttg ccactcggcc
     7081 gcccgctctt ccatccggcg ggcattgtcg gccagcgtcg cgaacatgtc ggaaaatttc
     7141 atcatcaagg ctctcctttg cacaaggcgc atggggacgg ccgcccggca agatctgcga
     7201 agcgccagcc ccctcgccaa cagcctgcgg tgccgggcga attttgtcaa agccgttgac
     7261 ctgcgcgcgt cccgcctgcg acggcccgtc cggttgcacg ggcccgcgca aggggctatc
     7321 tgcgcagggc agcattgttc cgggataagc catgatcgtg atcgcagcca tgcttctggg
     7381 cgcctttctg ggctggcgcc gcgccagcca gttgggcggc aagggacgcg acaaggcgca
     7441 atatgcggct gccttcgcgc tggccttcgc cgccctcggc cttttcctga cgatcttcat
     7501 cgaccgcatg atctgatgtt catccccttc ctcgacgcgc tgcgcaggca aggggttccg
     7561 gtttcgctgc gcgaatggct ggacctgatg gccgggatgc aggccgggat cgccgcgggc
     7621 cgtgtcgagg atttctacca tttcgcccgt ctcgcgctgg tcgcaactca gcgaagtgac
     7681 gacgaaacga gggttggctc ccttggtcag atgctccgcc ttggcca
//
LOCUS       DTVW01001129            4243 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2371328, whole
            genome shotgun sequence.
ACCESSION   DTVW01001129 DTVW01000000
VERSION     DTVW01001129.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 4243)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4243)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4243
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2371328"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            462..1715
                     /locus_tag="EYO87_14920"
     CDS             462..1715
                     /locus_tag="EYO87_14920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020039417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellin"
                     /protein_id="HIC67259.1"
                     /translation="MSSILTNQGAIVALQTLKSINSGLNKAQSEISTGKAIGSAKDDA
                     AIWAISKTMEADVSAFKAVSTSLNTAKATVETARSAAEQITEKLKGIKDKVVTAQSAS
                     SSDRVKLQDDIELMSKQIESIVNAAQFNGVNLIDGTSTATYDMVSSLDRVGSTVNVSK
                     IQVDRQDLSMAGAVAATFGGTAVTDTSIINNGGTAAGTADTVGGGSVQTIKIASVGSG
                     YSYRLTLDDSANQNVLGSRTFDYVAKPSDSTSDIANALGQALQNNLMANGITQYSVTR
                     VGDEIRLTNNLAAGVGNDIDVTAVTATGGTPASGGGMADLAGFDVTSDAGAADALTKV
                     EGLLSTAIDAAAALGSAQNRIETQNDFVGTLTDLMKTGIGSLVDADMEEASARLQALQ
                     TQQQLGIQALSIANQAPSSILALFR"
     gene            1775..2158
                     /gene="flaF"
                     /locus_tag="EYO87_14925"
     CDS             1775..2158
                     /gene="flaF"
                     /locus_tag="EYO87_14925"
                     /inference="COORDINATES: protein motif:HMM:PRK12794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis regulator FlaF"
                     /protein_id="HIC67260.1"
                     /translation="MPGSKTLNALTSQSEYGYGAPNLRPARELEYDAFSRVTRMMRQS
                     QAPGCETGMIAAIHKNKELWMILAADLADPGNGLPDALKAQLLSLARFSLRHSDRVLA
                     GNATSAVLIDVNISIMKGLRGEVRA"
     gene            2155..2559
                     /gene="flbT"
                     /locus_tag="EYO87_14930"
     CDS             2155..2559
                     /gene="flbT"
                     /locus_tag="EYO87_14930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019295212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis repressor FlbT"
                     /protein_id="HIC67261.1"
                     /translation="MSGLVLKLGPGERVLINGAVIENGEKRSKISIKTPNVNVLRLKD
                     AIHPDNARTPVSRACYIAQLMLSGDAAPEEGRRQLLVSIEALSQVFDDRDSRLVLAEA
                     TDHALAGAPYPAMRKLRELLPREARLFAARPN"
     gene            2468..3349
                     /locus_tag="EYO87_14935"
     CDS             2468..3349
                     /locus_tag="EYO87_14935"
                     /inference="COORDINATES: protein motif:HMM:PF06748.10"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1217 domain-containing protein"
                     /protein_id="HIC67262.1"
                     /translation="MRWPARPIRRCESCASCCREKRGFSRRARIEVPMTNAAINLGIG
                     GIAGWRILQRTEASQVQAIAQDPVVQRSTAYFRENTASGITAEDLVGNYRLLSVALGA
                     FGLEDDLPNKAFLRKILESDVGDQTSLVNRLSDKRYLRLAQAMGMEEGGNASANLGER
                     ISEAYLEREFERRVGEGDESLRLALNARRELESMRERTSSNNTLWYEVLGNPPLREVF
                     EKAFGFGSDYGKLSVDRQLEEFTKASERYLGSADFKDIASDAGIDRLVTSYLARSQIT
                     TTFAQNRYSTALTLLTS"
     gene            3586..>4243
                     /locus_tag="EYO87_14940"
     CDS             3586..>4243
                     /locus_tag="EYO87_14940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010392520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl phosphate synthase large subunit"
                     /protein_id="HIC67263.1"
                     /translation="MPKRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRV
                     ILVNSNPATIMTDPEMADATYIEPITPAVVEKIIAKERPDALLPTMGGQTGLNTALAL
                     ADSGALNRYGVELIGAQRSAIEMAEDRKLFREAMDRIGLENPRATIIAAPKLANGRYD
                     IAAGVAQAVEALADIGLPAIIRPAYTLGGTGGGVAYNRDDYEGIVRAGLDASPVAQVL
                     I"
BASE COUNT          855 a         1328 c         1347 g          713 t
ORIGIN      
        1 tctgaaatcg gccgtgatcg cggccgatcc cgttgccgcg acagcctgtc tcgaggatct
       61 ggcccatatg gcgcggcgcg gcctcggcgt ggaagaacgc gcgcaggcgg aaacaagcct
      121 gtcggagatc cgcgatctgg cacaggcgtc cgaacgcggt gcgcgccagg cgatcgagca
      181 gattcgcgcc atcgtcgagg ccgcgcgatc tctccagacc tatgacagtg cggggcgccg
      241 tcacgcgaca tcgacgacgg ccccggcgcc gcatcgcttt tagataaaat gcgccgcgaa
      301 gaggctttga gataaggggg ccggttcact agttgtaaac cgcaggccga tatgaaggtg
      361 gccgtgccgc gaacggtgcg gggcgaagat gcccgacggg tcagaaggcc agaaccctac
      421 gcaatcgcgg gcgcaaagcg ccccaattca aggaggacaa catgtccagc attctgacca
      481 accagggcgc catcgttgcg ctgcagacgc tcaagagcat caattccggt ctgaacaagg
      541 cccagtcgga aatctcgacc ggcaaggcca tcggcagcgc caaggacgat gccgcgatct
      601 gggcgatctc gaaaacgatg gaagccgatg tcagcgcttt caaggcggtt tcgaccagcc
      661 tgaatacggc aaaagccacg gtcgagaccg cccgcagtgc ggcggagcag atcaccgaga
      721 agctgaaggg gatcaaggac aaggtcgtga cggcccagtc ggcctcctcc agcgaccgcg
      781 tcaagctgca ggacgacatc gagttgatga gcaagcagat cgaatcgatc gtcaacgcgg
      841 cccagttcaa cggcgtcaac ctgatcgatg gcaccagcac cgccacctac gacatggtat
      901 cgtcgctgga tcgtgtgggc tcgaccgtca acgtgtcgaa gatccaggtg gatcgccagg
      961 atctttcgat ggccggcgcg gttgccgcga ccttcggcgg aacagcggtc accgatacgt
     1021 ctatcatcaa caatggcggg accgcggccg gaactgccga cactgtcggc ggtggcagtg
     1081 tccagaccat caagatcgcc tcggtcggct cgggctacag ctatcggctg acgctcgatg
     1141 acagtgcaaa ccagaacgtc ctgggctcac ggaccttcga ctatgtcgcg aagcccagcg
     1201 acagcaccag cgacattgcc aacgcgctgg gccaggctct gcagaataat ctgatggcca
     1261 acgggatcac ccaatacagc gtgacccggg tcggcgacga aatccgcctg accaacaacc
     1321 ttgctgccgg cgtcggcaac gatatcgacg tgaccgcggt gaccgcgacg ggcggcacgc
     1381 ccgcctcggg cgggggcatg gccgatctgg caggcttcga cgtgaccagc gatgccggcg
     1441 ccgccgacgc gctgaccaag gtcgaaggtc tgctcagcac cgcgatcgac gcggctgcgg
     1501 ctctgggttc ggcgcagaac cggatcgaaa cccagaacga cttcgtcgga acgctgaccg
     1561 atctgatgaa gaccggcatc ggttcgcttg tcgatgccga catggaagag gcatcggctc
     1621 ggctgcaggc actgcaaacc caacagcagc ttggcatcca ggcattgtcg atcgccaatc
     1681 aggcgccctc gtcgatcctg gccctgttcc gctgatccgg gcttgatccg cttccggggc
     1741 gcccgcgggc gccccggccc cacaccaccc agccataccg ggatccaaga cattgaatgc
     1801 gttgacttca cagtccgaat acggttacgg cgcgcccaac ctgcgcccgg cccgagaact
     1861 cgaatacgac gccttttcac gggtgacgcg catgatgcgc caatcccagg caccaggatg
     1921 cgagacgggc atgatcgcag ccattcacaa gaacaaggaa ttgtggatga tactggctgc
     1981 ggacctggcc gacccgggca acggcctgcc cgacgctttg aaggcgcagc ttctgtcgct
     2041 tgcgcggttt tcgttgcgtc actccgatcg cgttctcgcc ggcaacgcga caagcgcggt
     2101 gctgatcgac gtcaatatct cgatcatgaa gggcctgcgc ggcgaggtaa gggcatgagc
     2161 ggccttgtcc tcaagctggg ccccggtgag cgtgtgctga tcaacggcgc cgtcatcgag
     2221 aatggcgaga agcggtcgaa gatctcgatc aagacgccga acgtgaacgt gttgcggttg
     2281 aaggatgcga ttcatcccga caatgccagg acacctgtgt cgcgcgcctg ctatatcgcg
     2341 cagctgatgc tgtccggcga tgccgcgccg gaggaggggc ggcggcaatt gctggtctcg
     2401 atcgaggcgc tgagccaggt gttcgatgat cgtgacagcc gccttgttct tgccgaggcg
     2461 accgaccatg cgctggccgg cgcgccctat ccggcgatgc gaaagctgcg cgagttgttg
     2521 ccgcgagaag cgcggctttt cgcggcgcgc ccgaattgag gtcccgatga caaacgctgc
     2581 gatcaatctg ggcatcggcg gcatcgcggg atggcgcatc ctgcaacgca ccgaggcgag
     2641 tcaggtgcag gcgatcgcgc aggatccggt cgttcagcgc tcgacggcgt attttcgcga
     2701 gaatactgct tcgggcatca cggccgagga tctggtcggc aattaccggc tgctcagcgt
     2761 cgcgctgggc gcctttggtc tggaagacga tttgccgaac aaggcctttc tccgcaagat
     2821 tctggaatcc gatgtcggcg accagacatc gctggtcaat cgtctcagcg acaagcgcta
     2881 tcttcggctg gcccaggcga tggggatgga ggaaggaggg aacgcttccg ccaatctggg
     2941 cgaacgcata tccgaagcct atctcgaacg cgaattcgaa cgtcgcgtgg gcgaaggtga
     3001 cgaatcgctg cgcctggcgc tgaatgcgcg gcgcgaactg gaatccatga gggaacgcac
     3061 atcctccaac aacaccttgt ggtatgaagt cctgggcaac ccgccgttgc gcgaagtatt
     3121 cgaaaaggcg ttcggtttcg gcagcgatta cggaaagctc tcggtcgatc gacagctgga
     3181 ggaattcacc aaggcttcag aacgctatct tggaagcgcg gatttcaagg atattgccag
     3241 cgatgccggg atcgatcgct tggtcacatc ctacctggcg cgctcgcaga tcaccacgac
     3301 ctttgcccag aaccgctaca gcaccgcgct gacgcttctg acatcctgac gccggattcg
     3361 ccccttcgaa acgcgccgct cttcggcgca tttcgccggt tcttgcgaac ttgcatcgcc
     3421 aaaggctctg ctctggtcta cacggacgct cggtgcgcga cagcccttgg cgtctgcaag
     3481 cctgtctcgc cggcgaccga ggccgccacg cgcccttgca catgagacgc gcttggctat
     3541 aaccccggac gatttgcgcc gatcccagac agcccggagg cttgcatgcc gaaaagaacc
     3601 gatatcaagt cgatcctgat catcggggcc gggcccatcg tcattggtca ggcctgcgaa
     3661 ttcgactatt ccggcgccca ggcctgcaag gcgctgcgcg aggaaggtta tcgcgtgatc
     3721 ctggtcaact ccaatcccgc cacgatcatg accgatccgg aaatggccga tgcgacctat
     3781 atcgaaccga tcacgccggc cgtggtcgaa aagatcatcg ccaaggaacg gcccgatgcg
     3841 ctgctgccga cgatgggcgg gcagaccggg ctgaacaccg cgctggcgct ggccgatagc
     3901 ggcgcgttga accgctacgg ggtcgaactg atcggcgcgc agcgttcggc catcgaaatg
     3961 gccgaggacc gcaagctgtt ccgcgaggcg atggaccgga tcgggctgga aaatccgcgt
     4021 gccacgatca tcgccgcccc gaaactggca aatggcagat acgacatcgc cgccggcgtc
     4081 gcccaggcgg tcgaggcgct ggcggatatc ggcctgcccg cgatcatccg cccggcctat
     4141 acgctgggcg gcacgggcgg cggcgtggcc tataaccgcg acgattatga aggcatcgtg
     4201 cgcgcggggc ttgacgcctc gcccgttgca caggtgctga tca
//
LOCUS       DTVW01001130            2036 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2371747, whole
            genome shotgun sequence.
ACCESSION   DTVW01001130 DTVW01000000
VERSION     DTVW01001130.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2036)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2036)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2036
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2371747"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..819)
                     /locus_tag="EYO87_14945"
     CDS             complement(<1..819)
                     /locus_tag="EYO87_14945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011049101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HIC67264.1"
                     /translation="MKDWLRASAMEQGRAIMAGLLDPIDQTEAYLEAAKAHPDGRRIY
                     ARLTEARARSEAVAAHDRAKDELRHGLLDGVAISWKDNIDSGGTVTEAGSKLLEGRVP
                     RKDAVVLSRVAREGLVCLGKTHMTELAFSGLGLNPVTATPPNALDPALAPGGSSSGAA
                     VSVALGLAAAAVGSDTGGSIRVPAAWNGLVGFKPTHDAVPEKGVVPLCRKFDVVGPIA
                     RSVEDCAGLLALMAGDRAADLEGATVSGLRLMVLDGLPFDQAEEGPVTAFEDALQ"
     gene            complement(834..1010)
                     /locus_tag="EYO87_14950"
     CDS             complement(834..1010)
                     /locus_tag="EYO87_14950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010391895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1674 domain-containing protein"
                     /protein_id="HIC67265.1"
                     /translation="MSDRPDLPPAARRALAEAARRREEAAKKPPLPKEHGGRDGAEPV
                     RFGDYEKNGIAVDF"
     gene            1081..>2036
                     /locus_tag="EYO87_14955"
     CDS             1081..>2036
                     /locus_tag="EYO87_14955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HIC67266.1"
                     /translation="MAKPGTDGARKGALRLLQGVRDGLSLADQAGALAALPPADQARA
                     GRLAAEVLRHRDRADAVLALHVTRKPAPPVADVLRLATVEMLELGGAAHGVVDAAVSL
                     SRGLGQRGQAASGMVNAVLRKVSRHQGWGDLPPQRLPGWLRDPVVAAWGEDAARTIEA
                     AHQTGAPLDLTLKPGTTFEGGLALPTGSVRLHVPAQVSALPGFAEGDWWVQDAAAALP
                     VRLLDPQPGERIADLCAAPGGKTLQLAAAGAQVTAIDISAARLKRLAQNLARCGLAAD
                     LVRADALDWRPETAPDAILLDAPCSATGTIRRHPDLPFRRDGS"
BASE COUNT          281 a          748 c          709 g          298 t
ORIGIN      
        1 ctgcagcgcg tcctcgaagg cggtgaccgg gccttcctcg gcctgatcga agggcaaccc
       61 gtccagcacc atcaggcgca gcccgctgac cgtcgcgccc tccagatcgg cggcgcggtc
      121 gcccgccatc agcgccagca atccggcgca atcctcgacg ctgcgcgcga tcgggccgac
      181 cacgtcgaac ttgcggcaca acggcaccac gcccttttcc ggcaccgcgt catgggtggg
      241 cttgaacccg accagcccgt tccacgccgc gggcacccga atcgagccgc ctgtatccga
      301 tccgaccgcc gccgccgcca gcccaagggc caccgagacc gcggcacccg atgacgaccc
      361 gccgggcgcc agcgcaggat ccagcgcatt gggcggagtc gccgtgaccg gattcagccc
      421 cagacccgaa aaggccagtt cggtcatgtg tgtcttgccc agacagacca ggccctcgcg
      481 cgcgacgcgc gacagcacca ccgcatcctt gcgcggcacc cggccctcca gcagtttcga
      541 tccggcctcg gtcacggtgc cgccgctgtc gatattgtcc ttccagctga tcgccacccc
      601 gtccagcagg ccgtggcgca attcgtcctt ggcacggtca tgggcggcga cggcctcgga
      661 gcgggcgcgc gcctcggtca gccgtgcata gatgcgcctg ccgtccggat gggccttcgc
      721 cgcctccaga taggcttcgg tctggtcgat cggatccagc aggccggcca tgatcgcccg
      781 gccctgttcc atcgctgagg cgcgcagcca gtccttcatt cggaagtccc cattcaaaaa
      841 tcgacggcga tgccgttctt ctcgtaatcg ccgaaccgca ccggctccgc gccgtcccgg
      901 ccgccatgtt ccttgggcag gggcggcttt ttcgcggcct cctcgcggcg gcgggccgcc
      961 tcggccagcg cgcgccgcgc ggcgggggga aggtctggac gatcgctcat ggaaacctct
     1021 gccgaatggg attatgggtc gcgtcactct gtcagaaaca tctaggcgaa ggaaagcggt
     1081 ttggcaaagc cgggaacgga tggggcgcgc aagggcgcgc tgcggctgct gcaaggcgtg
     1141 cgcgacgggc tgtcgctggc ggatcaggct ggcgcgctgg ccgccctgcc tcctgccgat
     1201 caggcccgcg ccgggcgcct ggcggccgag gtcctgcgtc atcgggatcg cgccgatgcc
     1261 gttctggcgc tgcatgtcac gcgaaagccc gcaccgccgg tcgccgatgt cctgcggctg
     1321 gcgacggtcg agatgctgga actgggcggc gcggcccatg gcgtggtcga tgcggcggtg
     1381 tcgctgagcc gcggcctggg ccagcgcgga caggcggcct cgggcatggt gaatgccgtg
     1441 ctgcgcaagg tatcccggca tcagggctgg ggcgatctgc cgccgcagcg cctgcccggc
     1501 tggctgcgcg atccggtcgt ggccgcatgg ggcgaggacg cggcccggac gatcgaggcg
     1561 gcacatcaaa ccggtgcgcc gctggacctg accctgaaac ccggcacgac gttcgagggc
     1621 ggcctggcgc tgccgacggg atcggtgcgg ctgcacgtcc cggcgcaggt ttcggccctg
     1681 cccggattcg ccgagggcga ctggtgggtg caggacgccg ccgccgccct gcccgtgcgc
     1741 ctgctggatc cccagccggg cgaacggatc gccgatctct gcgccgcgcc gggcggcaag
     1801 acactgcaac tggccgccgc cggtgcgcag gtcaccgcaa tcgatatcag cgcggcgcgg
     1861 ttgaagcggt tggcgcagaa ccttgcccgc tgcgggctgg cggccgatct ggtccgcgcc
     1921 gatgcgctgg actggcggcc cgagaccgcg cccgacgcga tcctgctgga cgcgccctgt
     1981 tccgcgacgg gcacgatccg ccgccatccc gacctgccct tccgccgcga cggatc
//
LOCUS       DTVW01001131            2361 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2374467, whole
            genome shotgun sequence.
ACCESSION   DTVW01001131 DTVW01000000
VERSION     DTVW01001131.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2361)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2361)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2361
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2374467"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(102..959)
                     /locus_tag="EYO87_14960"
     CDS             complement(102..959)
                     /locus_tag="EYO87_14960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017927702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HIC67267.1"
                     /translation="MRQPSDRQPSSRLTTQRPLAGIVLKCASVAVFTVMAALVKATAD
                     KSLGVPPGQQVFFRSFFAIPVILAWLALRQEIGVGLRTFRPLGHVYRGIIGTAAMGLN
                     FWALSLLSFPEATAIGYAAPLLVVVFAAMFLGEDVRLFRLGMVGMGLAGVLIVLSPQL
                     NMSGAGDYRNQLGAVVALGGAFCAALAQIFVRRLVQEERTSAIVFWFSVTSAVLGLST
                     LPFGWVAPDARTLALLITTGILGGFGQIFLTSAYRFADASLIAPFEYVSMILAIAIVI
                     VIAPRSTPA"
     gene            1168..2313
                     /locus_tag="EYO87_14965"
     CDS             1168..2313
                     /locus_tag="EYO87_14965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010392714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase"
                     /protein_id="HIC67268.1"
                     /translation="MRAFLLRLVALLSLSAPVQAFETNAQTAWVYDVATGTVLMEKNA
                     DQQIPPASMSKLMTIYMLFEALREGRVQMDTRLPVSTNARQMQGSTMFLNEQDRPTVD
                     ELIKGIIVLSGNDACVVVAEGLSGTEAAFARQMTQKGKEIGLTNSVFTNSSGWPDPDH
                     LMTARDLGTLAVRLIRDFPELYKNFAIREFGFDGRAPANRFNRNPLLSLGIGADGLKT
                     GHTQEAGYGLVGSAVQNGRRVVFVITGLSGETARAEEAERIVNWSFRQFTMKKLVPAG
                     ETVVEAPVWLGTQDRLGLTTNEGVNVLIPAGAQDSVKVEAVYDSPIPAPIAKGDEVGR
                     LVVTVPGAKDAVTPLIAAQDVPAAGFMGRMKGAVTRLGNKAVQAAGL"
BASE COUNT          459 a          747 c          797 g          358 t
ORIGIN      
        1 ccggacgaac accccagtcg cgatcctgct gtcggccggg cctcggctac cctagcggca
       61 gccccgagcg agggccagag ggagtggaca atcagaccgg attaggccgg ggtgcttctt
      121 ggggcgatta cgataacgat ggcgatggcc aggatcatcg agacatattc gaagggcgcg
      181 atcagcgagg catcggcaaa gcgataggcc gaggtcagaa agatttgccc gaacccgccc
      241 agaatgccgg tcgtgatcag cagcgccagc gtccgggcat ccggcgccac ccagccgaag
      301 ggcagcgtgg acaatcccag caccgccgag gtgaccgaga accagaagac gatggccgag
      361 gtgcgttctt cctgcaccag ccggcgcacg aagatctgcg ccagcgcggc acagaaggcg
      421 ccgccaagcg ccacgacggc gcccaactgg tttcggtaat cgcccgcccc ggacatgttg
      481 agttgcggcg acagcacgat cagcacgccg gcaagtccca tcccgaccat gcccaggcgg
      541 aacaggcgca cgtcctcgcc cagaaacatc gcggcgaaga cgacgaccag cagcggcgcg
      601 gcatagccga tggcggtcgc ctcgggaaag gacaacagcg acagcgccca gaaattcagc
      661 cccatggcgg cggtgccgat gatgccgcga tagacatggc ccaagggccg aaaggtgcgc
      721 aggcccacgc cgatctcctg gcgcaaggcc agccaggcca gaatcaccgg aatggcaaaa
      781 aacgaccgga agaagacctg ctggccgggc ggcacgccga ggctcttgtc cgcggttgcc
      841 ttgaccagcg ccgccatcac cgtgaaaacc gcgacgctgg cgcatttcag gacaatccct
      901 gccagcggac gctgggtcgt caggcgtgac gagggctgac gatcggaagg ctggcgcatg
      961 atcgcatatc cgtgacgggg gccatgtgtc gctaggacgc gcggcggcca aggtcaagcg
     1021 gcggcgacgt gggccgcggg cggcggcggc gcgactgccg ttcctcgcgg cgccgcgttc
     1081 actttatccg tcccgcgcca ttcagccgcg ttgcggcatg gcgaggcatg atgtaaccat
     1141 cttgcgcaaa caggcaaagg aatccttatg cgtgcatttc tgctgcggtt ggtcgccctg
     1201 ctgtctcttt cggcgccggt gcaggcgttc gagacgaatg cgcagacggc atgggtctat
     1261 gacgtcgcca cgggcaccgt gctgatggaa aagaatgccg accagcagat cccgccggca
     1321 tcgatgtcga agctgatgac catctacatg ctgttcgaag ccctgcgcga aggccgggtg
     1381 cagatggata cgcggctgcc ggtctcgacc aatgcgcggc agatgcaggg ctcgaccatg
     1441 ttcctcaatg aacaggatcg cccgacggtg gacgaactga tcaagggcat catcgtgctg
     1501 tcgggcaacg acgcttgcgt cgtggtggcc gagggacttt ccggaaccga agcggccttt
     1561 gcccgtcaga tgacccagaa gggcaaggag atcggattga ccaattcggt cttcaccaat
     1621 tcctcgggct ggccggaccc ggatcacctg atgacggcgc gcgatcttgg cacgctcgcg
     1681 gttcggctga tccgcgattt tcccgagctc tacaagaatt tcgcgatcag ggaattcggc
     1741 tttgacggcc gtgcgccggc caaccgcttc aaccgcaacc cgctgctgag ccttggcatc
     1801 ggtgccgacg ggctgaagac cggccacacg caagaggccg gatacggcct tgtcggttcg
     1861 gccgtgcaga acgggcgccg ggtggtgttc gtgatcaccg gcctgtccgg cgagaccgcc
     1921 cgcgccgaag aggccgagcg gatcgtgaac tggtccttcc gccagttcac gatgaagaag
     1981 cttgttcccg caggcgagac ggtggtcgag gcccccgtct ggctcggaac ccaggaccgg
     2041 ctgggtctga ccaccaatga gggcgtgaat gtgctgatcc ctgcgggtgc gcaggacagc
     2101 gtcaaggtcg aggcggtcta tgattcgccc attccggcgc ccatcgccaa gggcgacgaa
     2161 gtgggccggc tggtcgtcac cgtgcccggc gcaaaggatg ccgtgacacc gctgatcgcc
     2221 gcgcaggacg tgcccgccgc cgggttcatg ggccggatga agggcgccgt gacccggctg
     2281 ggcaacaagg cggtccaggc cgccggcctc tgagccatgt tcatcagctt cgaggggatc
     2341 gacggctgcg gcaagtcaac g
//
LOCUS       DTVW01001132            1416 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2374726, whole
            genome shotgun sequence.
ACCESSION   DTVW01001132 DTVW01000000
VERSION     DTVW01001132.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1416)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1416)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1416
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2374726"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            99..1127
                     /locus_tag="EYO87_14970"
     CDS             99..1127
                     /locus_tag="EYO87_14970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015497404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HIC67269.1"
                     /translation="MEEVTIIGVDLAKNVFQLHGAAADGSVLFRKKLSRLQFARFMAD
                     HPACEVAMEACPSAHHWARELSAYGHSVRLIAPHYVKPFIKRQKNDAADAEAIAEAAT
                     RPTMRFVEPKTEEQQARAVAFRAREQIVKQRTEAINALRAHLYEFGHVAPEGVGYIPR
                     LAKVVDDPGSGLPDLARDICRMVLEQIDLLSSRLTAVSAKLAAASRAAAIPRQLQTMP
                     GVGPITALAVETFAPPMDQFRRGRDFAAWLGLVPRQHSSGGKQRLGKTSKMGQRDIRR
                     LLVTGAMAVIRWALRRGAPQNPWIERMLERKPPMVAAFALANKMARGIWAMLTRGESY
                     RGPVLIDA"
BASE COUNT          278 a          427 c          467 g          244 t
ORIGIN      
        1 gccactggcg gagatggggt ggatgccgct ctcccctgac ggcatcgcga tgtgccaaac
       61 tcgtggtgtc gaaacacaag ctgaaggaga gggcatccat ggaagaagtt accatcatcg
      121 gcgtcgatct ggcaaagaac gtgttccagc tgcacggggc tgcggcggac gggtcggtcc
      181 tgttccgcaa gaagctgtct cgcctgcagt ttgcacggtt catggcggat catcctgcct
      241 gcgaggtggc gatggaggcg tgtcccagcg cgcaccattg ggcgcgggaa ttgtccgcct
      301 acgggcacag cgttcggctg attgcgccgc actacgtcaa gccgttcatc aagcgtcaga
      361 aaaacgacgc cgccgacgcg gaggcaatcg cggaggcggc cacgcgtccg accatgcggt
      421 tcgtcgaacc caagaccgaa gagcagcagg cccgggcggt ggcgtttcgc gctcgcgagc
      481 agatcgtgaa gcaacggacc gaggcgatca acgccctgcg cgcgcacctc tatgaattcg
      541 ggcacgtcgc gccggaaggg gtcggataca tcccgcggct ggcgaaggtg gtcgatgatc
      601 cgggttcggg cctgcctgac ctggcgcgag acatctgccg catggttctg gaacagatcg
      661 acctcttgtc gtcccgcctc accgcagttt cggcaaagct cgccgccgcg tccagggcgg
      721 ccgccatacc acggcagtta cagaccatgc cgggtgtcgg cccgatcacc gcgctcgcag
      781 tcgaaacttt cgcgccgccg atggaccagt tccggcgtgg ccgcgatttt gccgcctggc
      841 tcgggttggt gccacggcaa cattcttctg gcggaaaaca gaggctgggg aaaacatcga
      901 agatggggca gcgggacatc cggcgattgc ttgtcaccgg cgcgatggcg gtcatccgct
      961 gggccctgcg gcgtggcgca ccgcaaaatc cgtggattga gcgcatgttg gaacgtaagc
     1021 caccgatggt cgcggccttc gcactggcca acaagatggc gcggggcatc tgggcgatgc
     1081 tgacacgcgg cgaaagctat cgcggtccgg tgctgatcga cgcctgatcg ggcatcgaac
     1141 gggcactcgg gccaccgagt tgtgaggaag acatgaaccg aatgggcaca tgatcgacat
     1201 gatccgggtt gggcaaacca gaaaccttct cagagcttcg agctcgctgt tggagatttg
     1261 gccccggtcc gcgcatcacc atcccggcca gcggcatcta tcgggccgcg ctaacaggcc
     1321 tgacaagagt ccgcactcga tcacatgtct aaggttcaga aattccttgc aaatgagggc
     1381 ggcatccaca agagaaggtt ggatatcagg cccatc
//
LOCUS       DTVW01001133            1666 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2375598, whole
            genome shotgun sequence.
ACCESSION   DTVW01001133 DTVW01000000
VERSION     DTVW01001133.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1666)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1666)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1666
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2375598"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..283
                     /locus_tag="EYO87_14975"
     CDS             <1..283
                     /locus_tag="EYO87_14975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010392336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HIC67270.1"
                     /translation="HGGSPASVMDTSDPAFAAAKSALSEEWGREAAFIGAGGSIPVAG
                     DFKHILGMDSLLIGFGRDDDRIHSPNEKYDVESFAKGARSWARILAALR"
     gene            complement(596..1222)
                     /locus_tag="EYO87_14980"
     CDS             complement(596..1222)
                     /locus_tag="EYO87_14980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HIC67271.1"
                     /translation="MHAALLPLAALALLSACATTTSDKAERAKQAEAQARQMSLAQRP
                     PMRWGQRSGADAWTRATLTALDREGVKVLSRVPSDIDAFCPNYAQLGAPGRKAFWAGL
                     LSAVAKHESTYNPKASGGGGKWIGLMQIAPATWRNYNCDGNIRNGADNMSCAVRIMSR
                     QVARDNAVANDGSGWRGVARDWAPMRNPEKRADIAAWTSSQSYCTPRG"
     gene            1505..>1666
                     /gene="gatB"
                     /locus_tag="EYO87_14985"
     CDS             1505..>1666
                     /gene="gatB"
                     /locus_tag="EYO87_14985"
                     /EC_number="6.3.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998141.1"
                     /note="allows the formation of correctly charged
                     Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation
                     of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms
                     which lack either or both of asparaginyl-tRNA or
                     glutaminyl-tRNA synthetases; reaction takes place in the
                     presence of glutamine and ATP through an activated
                     phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     GatCAB subunit B"
                     /protein_id="HIC67272.1"
                     /translation="MLDHLSFTAPQPKVIAGARGDWELVIGLEVHAQIASKAKLFSGA
                     STEFGAEPNS"
BASE COUNT          275 a          585 c          529 g          277 t
ORIGIN      
        1 ccacggcggc agcccggcca gcgtcatgga cacctcggat cccgccttcg cggccgccaa
       61 atccgcgctg agcgaggaat gggggcgcga ggccgccttt atcggcgccg gcggctcgat
      121 tcccgtcgca ggtgatttca agcatattct gggcatggat tccctgctga tcggctttgg
      181 ccgcgacgat gaccggatcc attccccgaa cgagaaatac gacgtcgaaa gcttcgccaa
      241 aggcgcgcga tcctgggcgc gcatccttgc ggccctgcga taggcgggcg gcacgggggc
      301 gctgcccccc tcggccccag ggggcctcac cccccgaggt atttgaaaag agggcgaggg
      361 gcgattaacg acaaattaag caattgcgga caagactgcg aatcgcggta caggcggagg
      421 cgccgatgac cgcaagagag cgaggcgctc cggtttcccg ccaagccccc tgagccggca
      481 gccggagcga cctttcttcc gtctcgttct ctttccaatc gcctttggcg ccatcggcgg
      541 tccttggcac cggtcttccc ggcagcgccg cgcaggccga cctgaaacgc cgcttctatc
      601 cccgtggcgt gcaatagctc tggctgctgg tccaggcggc tatatcggcg cgcttctcgg
      661 ggttgcgcat cggcgcccag tcgcgcgcca cgccgcgcca gccgctgccg tcattggcca
      721 ccgcattgtc gcgcgcgacc tgtcgcgaca tgatccggac ggcgcaggac atgttgtcgg
      781 ccccgttgcg gatattgccg tcgcaattgt aattgcgcca ggtcgcgggc gcgatctgca
      841 tcaggccgat ccacttgccg ccgccgccac tggctttcgg gttataggtg ctttcatgct
      901 tggccaccgc cgacagcaga cccgcccaga aggccttgcg gcccggcgcg ccaagctggg
      961 cgtaattggg gcagaaggcg tcgatgtccg agggcacgcg cgacagcacc ttcaccccct
     1021 cgcgatccaa agcggtcagc gtcgccctgg tccaggcatc cgcgcccgac cgctgacccc
     1081 accgcatcgg cggcctttgc gccagcgaca tctgccgggc ctgcgcctcg gcctgcttcg
     1141 cccgttcggc cttgtcgctc gtcgtggtcg cacaggcgct cagcaaggca agagcggcca
     1201 ggggcagaag cgcagcgtgc atcgggatcc tctctggaag gtttcgtcgc ttccggatta
     1261 gccatgcgtg caattcccgc aagcatcgcg gaatccttcg gcgaaatccc gcccggccac
     1321 gcccgcggcg cgacgaaaat ccgccgatcg accatgccgg ggcggccttc ttgacctgtc
     1381 acacaaagac gtgtcgcagg gcaggcgggg tgcgcgcgtc gggcgtgacg caggccccca
     1441 gtgacaagcg ccctctgctg ccctagaaca cccgccgaga cgccatttgc cgacgaggat
     1501 cccgatgctg gaccacctga gcttcaccgc cccccaacca aaggtcatcg ccggggcgag
     1561 gggcgattgg gaactggtca tcgggctgga agtccacgcc cagatcgcca gcaaggccaa
     1621 gcttttttcc ggcgcatcga ccgaattcgg cgccgagccg aattca
//
LOCUS       DTVW01001134            1355 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2375990, whole
            genome shotgun sequence.
ACCESSION   DTVW01001134 DTVW01000000
VERSION     DTVW01001134.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1355)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1355)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1355
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2375990"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..350
                     /locus_tag="EYO87_14990"
     CDS             <1..350
                     /locus_tag="EYO87_14990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018431184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="IclR family transcriptional regulator"
                     /protein_id="HIC67273.1"
                     /translation="RSLLARMTVAEIAELYAGYDGLNDLLTRLSAIRAQGFSYSSQEA
                     TPGVDAIAIAVANPATDEAVSLCIVYPHAVVEDADRDEMLSALAKGAARIADELGDSA
                     FASPVTPQKGKIA"
     gene            347..>1355
                     /locus_tag="EYO87_14995"
     CDS             347..>1355
                     /locus_tag="EYO87_14995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006938001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase family protein"
                     /protein_id="HIC67274.1"
                     /translation="MTQSRSRWRVGFDIGGTFTDFVLYDSETSSVTLHKRLTTPHDPS
                     EAALLGLDELLALRSISHADVSEIVHGTTLVTNAVIERKGAPVGLITTRGFRDILEMG
                     TEQRYDIYDLFVAFPDPIVSRDLRLEVDERMTAGGEVATPLDETAVRKAAEHLVSQGC
                     EAIAIVFLHSYANSDHEQRAAAIVREAFPDLAVSISKDVVAEMGEYQRNVTTCANAFV
                     QPLMHRYLTKLEQELRGKGFEGPLRLMHSAGGLVSVETARDFPIRLLESGPAGGGLAT
                     ALFGEKAGLKDVISFDMGGTTAKACMIEDGRAEIAPMMEAARVHRFTKGSGLPIKAPV
                     IE"
BASE COUNT          250 a          402 c          435 g          268 t
ORIGIN      
        1 gccggtcgct gctggcgcgg atgaccgttg cagagattgc cgagctttat gcgggctatg
       61 acgggctgaa cgacctgttg acccgtctgt ccgccatccg cgcgcaaggc ttttcttatt
      121 ccagccaaga ggcgacaccg ggcgtcgatg ccattgccat tgcagtcgcc aatccggcga
      181 ccgacgaggc ggtgagcctc tgcatcgttt atccccacgc ggtggtcgaa gacgccgacc
      241 gcgacgagat gttgtccgcg cttgcaaagg gtgcagcccg cattgcggac gaactgggcg
      301 acagcgcatt cgcgtccccg gtgacaccac agaaaggaaa gatcgcatga cccagtccag
      361 atcgcgttgg cgcgtcgggt tcgacatcgg tgggacattc accgatttcg ttctctacga
      421 ttccgaaacc tcatcggtca ccttgcacaa gcgtctgaca accccgcacg atccgtccga
      481 agcggcgctt ttggggctgg acgaattgtt ggcgcttcgg tcgatcagcc atgccgatgt
      541 atcggaaatc gtgcacggca ccacgcttgt caccaacgct gtgatcgaac gcaaaggtgc
      601 gcccgtgggt ctgatcacga cgcgcgggtt tcgcgacatt ctggagatgg ggaccgaaca
      661 gcgctacgat atctacgacc tgttcgtcgc gttcccagat cctatcgtca gccgcgatct
      721 gcggctcgag gtcgatgagc gcatgaccgc aggtggcgag gttgccacgc cgcttgatga
      781 gactgccgtg cgcaaggccg ccgagcatct tgtgtcgcag ggttgcgaag cgattgccat
      841 tgtcttcctg cattcctacg ccaattccga ccacgaacaa cgggccgccg cgattgtgcg
      901 cgaggcgttc ccggatctgg cggtgtcaat ttccaaggat gtcgtggccg agatgggcga
      961 ataccagcgc aatgtgacca cctgtgccaa tgcctttgtc cagccgttga tgcaccgcta
     1021 cctgaccaag ctggaacagg aattgcgcgg caagggcttt gagggcccgc tgcggctcat
     1081 gcattctgcg ggtggcttgg tgtcggtgga aacggcccgc gatttcccga tccggctgct
     1141 ggaaagcggc ccggcggggg gtggtcttgc cactgcgctc ttcggcgaaa aggccgggtt
     1201 gaaagacgtg atttcattcg acatgggcgg cacgacggcc aaggcctgca tgatcgagga
     1261 tggccgcgcc gagattgcgc cgatgatgga agcagcgcgc gtgcatcgct ttaccaaggg
     1321 gtcgggcctg ccgatcaagg cgccggtgat cgaga
//
LOCUS       DTVW01001135            3129 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2376075, whole
            genome shotgun sequence.
ACCESSION   DTVW01001135 DTVW01000000
VERSION     DTVW01001135.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3129)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3129)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3129
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2376075"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..271
                     /locus_tag="EYO87_15000"
     CDS             <1..271
                     /locus_tag="EYO87_15000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011750270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="rod shape-determining protein RodA"
                     /protein_id="HIC67275.1"
                     /translation="AVSLLVLYTLIVGFCLHSALTNRDRFASLITIGISGTFFLYFAI
                     NMATVMGLIPAKGSPLPLISYGGTSLMILMLGFGLVQSAHVHRSR"
     gene            276..1184
                     /locus_tag="EYO87_15005"
     CDS             276..1184
                     /locus_tag="EYO87_15005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011750271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glyoxylate/hydroxypyruvate reductase A"
                     /protein_id="HIC67276.1"
                     /translation="MRVLFAARPEAWQAWAPALREACPEMDLDRGGEPASFDAIIYAP
                     GGEIEDLSPYGNARLVQSLWAGVERIVTNPTLTQPLARMVDPGLARGMAEFCTGWAMR
                     AHLGMDRYAQDGTWRNDVVAPLAPQRGVTILGLGELGRATAAMLGAIGFRLAGFSASG
                     RPVEGVEVFDADHLAAALGRAEILINLLPDTARTRDLLDDDHLAMLPRGAWIINPGRG
                     TAIVDAALIAALDRGDLGHAVLDVFRTEPLPGGHPFWSHPGVTVTPHIAAETRPETAA
                     PVVAENLRRAMSGRPILNLVDRDRGY"
     gene            complement(1199..1930)
                     /locus_tag="EYO87_15010"
     CDS             complement(1199..1930)
                     /locus_tag="EYO87_15010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010393894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2062 domain-containing protein"
                     /protein_id="HIC67277.1"
                     /translation="MFKRRKPRSYGQIASDMIYPRGGWRRAGAYVWFRLRRLPDQPHR
                     IGRGVASGVFVSFTPLFGFHFLSAAGCAWLIGGNVLAALLATFVGNPITFPFIAVVAV
                     SLGRRLLGMGGELSPQLIFGEFARASGEMWHNIRSLFGPERAHWGNLVDFFQQVYLPY
                     LVGGLILGLIAAIATHYLSVPVIRAYHWRRAKKMAERIARVRKQGEIVTTAPDLAPSR
                     DSAAPAGHAARPDHPPEDGDPPRSI"
     gene            complement(1995..2978)
                     /locus_tag="EYO87_15015"
                     /pseudo
     CDS             complement(1995..2978)
                     /locus_tag="EYO87_15015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_351719.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional (p)ppGpp
                     synthetase/guanosine-3',5'-bis(diphosphate)
                     3'-pyrophosphohydrolase"
BASE COUNT          520 a         1038 c         1036 g          535 t
ORIGIN      
        1 cgcggtctcg ctgctggtgc tgtatacgct gatcgtgggc ttctgcctgc attcggcgct
       61 gaccaaccgc gaccgctttg ccagcctgat caccatcggc atctcgggca cgttctttct
      121 gtatttcgcc atcaacatgg cgacggtgat gggtctgatc ccggccaagg gttcccccct
      181 gccgctgatc agctatggtg gcacctcgct gatgatcctg atgctgggct tcggcctggt
      241 gcaatccgcc catgttcacc gatcgaggta gccagatgcg cgttctcttt gccgcccgtc
      301 ccgaggcgtg gcaggcctgg gccccggccc tgcgcgaagc ctgtcccgaa atggatctgg
      361 acaggggcgg cgaaccggcc agcttcgacg ccatcatcta cgcgccgggc ggcgagatcg
      421 aggatctgtc gccctatgga aatgcacggc tggtccagag cctgtgggcc ggggtcgagc
      481 ggatcgtcac caacccgacc ctgacccagc cgctggcgcg gatggtcgat ccgggcctgg
      541 cgcggggcat ggcggaattc tgcaccggct gggcgatgcg ggcgcatctg gggatggacc
      601 gctatgcaca ggacggcacc tggcgcaacg atgtcgtcgc accgctggcg ccccagcggg
      661 gcgtgaccat cctgggcctc ggagagctgg gccgtgccac cgccgcgatg ctgggcgcga
      721 tcggctttcg gctggcgggc ttcagcgcct cgggccgccc ggtcgaaggc gtcgaggtct
      781 ttgacgcgga ccatctggct gcggccctgg gccgggccga aatcctgatc aacctgctgc
      841 ccgacaccgc gcggacgcgg gatctgctgg atgatgatca cctggccatg ctgccgcgcg
      901 gggcctggat catcaatccc ggccggggca cggccatcgt ggacgccgcg ctgatcgccg
      961 cgctggatcg aggcgatctg ggacatgcgg tgctggatgt cttccgcacc gagccgctgc
     1021 ccggcggcca cccgttctgg tcccatcccg gcgtgaccgt cacgccccat atcgccgccg
     1081 agacgcggcc cgaaaccgcg gccccggtgg tcgccgaaaa cctgcgccgc gccatgtccg
     1141 ggcgacccat attgaacctc gtggaccgcg accggggata ctgaggcggt ttccgccgtc
     1201 agatgctccg gggcggatcg ccatcctccg gcgggtgatc ggggcgggcg gcgtgtccgg
     1261 caggcgccgc ggaatcgcgg ctgggtgcca gatccggggc ggtggtgacg atttcgccct
     1321 gcttgcgcac ccgcgcgatc cgctcggcca tcttcttggc gcgccgccag tgataggcgc
     1381 gaatcacggg gacgctgagg tagtgggtcg cgatggccgc gatcagaccc agaatcaggc
     1441 cgcccacgag atagggcaga tagacctgct ggaagaaatc gaccagattg ccccaatgcg
     1501 cgcgttcagg cccgaaaagc gaccggatat tgtgccacat ctcgccgctt gcgcgggcga
     1561 attcgccgaa gatcagttgc ggagacaact cgccgcccat ccccagcaat cggcgtccca
     1621 ggctgacggc cacgacggcg atgaagggaa aggtgatcgg attgccgaca aaggtcgcca
     1681 gcagcgcggc cagcacattg ccgccgatca gccaggcaca gcccgccgcc gacaggaaat
     1741 gaaaaccgaa aagcggagtg aaggaaacga agacccccga cgccacgccg cgcccgatcc
     1801 ggtgcggctg gtcgggcaga cggcgcaggc ggaaccagac ataggcaccc gcgcgccgcc
     1861 agccgccgcg cggatagatc atgtcgctgg cgatctgccc atagctgcgt ggcttgcggc
     1921 gcttgaacac cccggcctac cctatcccaa tcctgtcctg ccgggcaaga cctacccgga
     1981 tcggccccgc ttgcctaggg tttcagcgcc ggatcgcgga tgcgtgcgac ctgggccacg
     2041 tcgctttcgg tctccagcac cgtcagcaga ttgtgcagat gttcgcgatc gcgcaattcc
     2101 acctcgatct cgatgcgata gaaatccggc ttgcggtcga tgaattcgag gttcgagata
     2161 ttggccccct gcgacccgat gaggctgcaa atccggccca gcacgcccgc atcgtggcgg
     2221 atcgtcagat ccagcagcgt cgaataggcc gcaggatggc gcccctcgcg ccagtgcagg
     2281 tcgatccagc ggtcggggct gtcctcgaat tcggcaagga cggggcagtc gatggcatgg
     2341 atgaccacgc ccgtgccgcg ataggtgatg cccacgatcc gttcgcccgg cagcgggttg
     2401 cagcagggcg cgcgggtgaa gttggcatcg gcctccagcc cggcgaaggg gcgggcgccg
     2461 tcgatttcgt cctgatggcc cgcgagttcg ggatagagaa ccgccagaac ctccttggcg
     2521 gaattctcgg cgctgccgat ccgcgccagc aattcctccg catcggccat gcccatctgc
     2581 cgcgcggcgg tgcgcagcgt cttgtccgtg gccttgcgcc cgacatgttc gaaactgacg
     2641 cggaccagtt cgcggcccag ccggatgaag cggtcgcggt cctcttcgcg cagggaccga
     2701 cggattgccg ccttggcccg gccggtcacg acgatatcca gccatgtcgc ctgcgggcgc
     2761 tgtcccgagg ccgcgatgat ctcgaccgac tggccgttct tcagccgggt ccacagcggc
     2821 acccggatcc cgtccacctt ggcgccgaca caggaattgc ccacgcgggt gtggatcgca
     2881 taggcaaaat cgatcggcgt cgcgcctttc ggcaactgga tcacgtcacc cttgggcgtg
     2941 aagcagaaga cctgatcctg atacatctcc agcttgaccc gccgtggctc gcacatgcgc
     3001 tcaattggtt tcaaatagaa cacgtgctac ggactatagg aactgtttac tgatttgcag
     3061 gagtgtggtt gccggctgga taagacgatc aatgatggta ttcttcagga gttccacatt
     3121 gtggggcgc
//
LOCUS       DTVW01001136            1581 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2377741, whole
            genome shotgun sequence.
ACCESSION   DTVW01001136 DTVW01000000
VERSION     DTVW01001136.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1581)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1581)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1581
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2377741"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>1581
                     /locus_tag="EYO87_15020"
     CDS             <1..>1581
                     /locus_tag="EYO87_15020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="double-strand break repair helicase AddA"
                     /protein_id="HIC67278.1"
                     /translation="RRVQDARPQMTALQAAQKTLALHRFAHAFTTRLAGRKTAHGWLD
                     FDDLIRRAALLLEQSSMAQWVLWRLDGGIDHILVDEAQDTSPEQWRVIRRLTDEFTSG
                     AGAHDRPRTLFVVGDPKQSIYSFQGADIAVFEEMRDRFDRDFRAVRQPMQQRGLRHSF
                     RSSPAILSVVDAVFQGEAAQGLGVPPEHIAFRADLPGRVDIWPPLPEPETPEEGDWTR
                     PVDAPAENAADRVLARAIAGRIRAMLGGPIMDVRNGQPRPVGPGDIQILVQRRAGLFD
                     DLIRELKAANLPVAGADRLKLAAELAVRDITATLAVLATPEDSLSLAAALRSPLFGLS
                     EDDLYRLAAGRGRAHLWQRLRASDHRTAREVLADLMAQADRLRPYDLISRLLIRHGGR
                     MALLARLGPEAEDGIDELLSQAMAYEQAETPSLTGFLVWLASDEVQVKRQLPGGSGGL
                     IRVMTVHGAKGLESPIVILPETRKRRADGRGRIVRLDGMPAWKGAAPDRPDALTIAVA
                     EQERRQDEERRRLLYVAMT"
BASE COUNT          241 a          527 c          580 g          233 t
ORIGIN      
        1 gcggcgggtg caggacgccc ggccgcaaat gaccgccctg caggccgcgc agaagacgct
       61 ggccctgcac cgctttgccc atgccttcac cacccgcctg gcgggccgca agacggcgca
      121 tggctggctg gatttcgacg acctcatccg gcgcgccgcg ctgctgctgg aacaatccag
      181 catggcgcaa tgggtgctgt ggcggctgga tggcgggatc gaccatatcc ttgtggatga
      241 agcgcaggat accagtcccg aacaatggcg cgtgatccgg cggctgaccg acgaattcac
      301 cagcggcgca ggcgcgcatg accggccccg gaccctgttc gtcgtaggcg atccgaaaca
      361 gtcgatctat tcgttccagg gcgcggatat cgcggtcttc gaggaaatgc gcgaccggtt
      421 cgaccgtgat ttccgtgccg tccggcagcc gatgcaacag cgcgggctgc gccattcctt
      481 ccgctcgtcg cccgccatcc tgtcggtggt ggacgcggtc tttcagggcg aggcagcgca
      541 ggggctgggc gtgccgcccg aacatatcgc cttccgcgcc gatctgccgg gacgggtgga
      601 catctggccg ccgctgcccg aaccggaaac gcccgaggaa ggcgactgga cccggcccgt
      661 ggatgcgcct gcggaaaatg ccgccgacag ggtgctggcc cgcgccatcg caggccggat
      721 ccgcgcgatg ctgggtggcc cgatcatgga tgtcaggaac ggccagccgc gcccggtcgg
      781 gccgggcgac atccagatcc tggtgcagcg ccgggcggga ctgttcgacg acctgatccg
      841 cgaattgaag gcggcgaacc tgcccgtcgc cggggccgac cggctgaagc tggcggccga
      901 gctggcggtg cgcgacatca ctgccacgct ggcggttctg gccacgcccg aggacagcct
      961 gtcgctggcc gcggccctgc gctcgcccct gttcgggctg tccgaggacg atctctaccg
     1021 actggcggcg gggcgcggcc gggcgcatct gtggcagagg ctgcgcgcct ccgaccaccg
     1081 gaccgcgcgc gaggtgctgg ccgacctgat ggcgcaggcg gaccggctgc ggccctatga
     1141 cctgatctcg cgcctgctga tccgtcatgg cgggcggatg gcattgctgg cccggctggg
     1201 ccccgaggcc gaggacggga tcgacgaatt gctgtcgcag gccatggcct atgaacaggc
     1261 cgagacgccc tcgctgaccg ggttcctggt ctggctggcc agcgacgagg tgcaggtcaa
     1321 acggcaattg ccgggcggca gcggcggcct gatccgggtg atgacggtgc atggcgccaa
     1381 gggtctggaa agcccgatcg tgattttgcc ggaaacgcgc aagcgacgcg ccgatgggcg
     1441 cgggcgcatc gtgcggctgg acgggatgcc tgcgtggaag ggcgccgcgc cggaccggcc
     1501 cgatgcactg accatcgcgg tcgccgaaca ggaacgccgg caggacgagg aacggcggcg
     1561 gctgctttac gtcgccatga c
//
LOCUS       DTVW01001137            1456 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2377816, whole
            genome shotgun sequence.
ACCESSION   DTVW01001137 DTVW01000000
VERSION     DTVW01001137.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1456)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1456)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1456
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2377816"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..804
                     /locus_tag="EYO87_15025"
     CDS             <1..804
                     /locus_tag="EYO87_15025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009503526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HIC67279.1"
                     /translation="QIRALEESLGTTLFHRHARGLILTEQGELLFEATSSMARKLDGA
                     SARIRDSEEHVFGELKVTTTVGFGTLWLAPRLVKLYENFPDLKIDLILEERVLDLPMR
                     EADLAIRMKEPSQSDLIRRRLLNIRMRLYATQEYLDHAGIPDSIEDLTSHRLICQKPD
                     QPQVAAGARLIQTVMAQNITSTLTVNNYFGVLQSVLANVGIGVLPDYLTADHDRLVRV
                     LPDTESGEVPVFLAYPEELRQTRRVAVFRDFVLQEIQAYRRRQSEALSA"
     gene            1105..1413
                     /locus_tag="EYO87_15030"
                     /pseudo
     CDS             1105..1413
                     /locus_tag="EYO87_15030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011569350.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase II"
BASE COUNT          281 a          468 c          418 g          289 t
ORIGIN      
        1 cagattcgcg cgctggagga atcgctgggc acgaccctgt tccaccgtca cgcgcgcggc
       61 ctgatcctga ccgagcaggg cgaacttctg ttcgaggcga cgtcatcgat ggcgcgcaag
      121 ctggacggtg cctcggcccg gattcgcgac agcgaggaac atgtcttcgg cgaattgaag
      181 gtcaccacca cggtcggttt cggcacgctg tggctggccc cgcgcctggt caagctttac
      241 gaaaactttc ccgatctgaa aatcgacctg atcctcgagg agcgggttct ggatctgccc
      301 atgcgcgaag ccgacctggc catccgcatg aaagagccaa gccagtccga cctgatccgg
      361 cgcaggctgc tgaacattcg catgaggctg tatgccacgc aggaatatct ggaccacgcc
      421 ggtatccccg acagcatcga ggatctgacc agtcaccggc tgatctgcca gaagccggat
      481 cagccccagg tggccgccgg cgcccgcctg atccagacgg tcatggccca gaacatcacc
      541 tcgaccctga cggtgaacaa ctatttcggc gtcctgcaaa gtgttcttgc gaatgtcggc
      601 atcggcgtcc tgccggatta cctgaccgct gatcacgatc gtctcgtgcg ggttctgccc
      661 gataccgaat cgggcgaggt tccggtcttt ctggcctatc ccgaagaact gcgtcagacg
      721 cgccgcgtcg cggtcttccg cgatttcgtg ctgcaggaga ttcaggccta tcgccgccgg
      781 caaagcgagg cgctcagcgc ctgagcgtcc gcacccacac cgatctctac aactttcgat
      841 tgtagccatt cggcaactgc atgtccgcta tgctgcgggt gcggcatgaa aagacttgat
      901 ccattcacgg actgcacata gatcgtgctg cgaaggcgat gaccagccta atcgctgatc
      961 accttcaacc tccctgttgg acttgggccg ggccttgtgc ccggcttctt ttttgccctg
     1021 ccgccggccg tgacgcgcgg ccctttccat accccgcgtc tggccataaa aggcgcctga
     1081 ctccacgcgc aggaagggcc ggacatgcag gaaccgacga tcaccgccga tctgatcgcc
     1141 gcgcacgggc tgaagcccga cgaatacgac cgcatcctgt cgatcatcgg ccgcgcgccc
     1201 agtttcacgg aactgggtat cttcagcgcc atgtggaacg aacattgttc ctacaagtcc
     1261 tcgaagacat ggctgcgcac gctgcccacg gacggaccgc aggtgatttg cgggccgggc
     1321 gagaatgcag gcgtggtcga tatcggcgac gggcaggccg tggtcttcaa gatggaaagc
     1381 cacaatcatc ccagctatat cgaaccgcat cagttctttt gtttcgtttt tcattaaccg
     1441 gtgcctctag cttaac
//
LOCUS       DTVW01001138            3622 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2377819, whole
            genome shotgun sequence.
ACCESSION   DTVW01001138 DTVW01000000
VERSION     DTVW01001138.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3622)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3622)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3622
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2377819"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(121..1428)
                     /locus_tag="EYO87_15035"
     CDS             complement(121..1428)
                     /locus_tag="EYO87_15035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009504572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease"
                     /protein_id="HIC67280.1"
                     /translation="MSFFQIGLCGIVSVILLVLLRVPIAVALGIVSFFGFWAMLGSGA
                     AFGLLTAVPYDFAAHWTLSSIPMFLLMGYVCYQTDITRGIFKAARVWLSFLPGGLAVA
                     SVGGAALFSAAAGSSLACAAAMGRIAVPEMLKRDYDPGLSTAVVAAAGTMGSLIPPSI
                     LLIIYGIFAEVAISKLFLAAIVPGVLTMLGYWAVIIVRVWINPALAPSLDESATWSER
                     LEALSETWPVILLVVGVFGGLFTGIFTPTQAGAVGAALSFVIAAARGTLNWKVSRIAL
                     MDTAKMTAAIFIIAVGANLFSRFLAISGIPEAMTDLVIDMGASYVMLVFGTAVIFCLL
                     GMILDPLGILLLTLPILLPIYEANHISLIWLGVLATKLVEMALITPPVGLNVFVIKGI
                     VGDAVPISLIFKGVLWFLAADVVVLIIMVAFPELIMFLPELGN"
     gene            complement(1439..1960)
                     /locus_tag="EYO87_15040"
     CDS             complement(1439..1960)
                     /locus_tag="EYO87_15040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009504571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease"
                     /protein_id="HIC67281.1"
                     /translation="METVIARLGRVSRIITYIATALAALMMVHVTLDVILSQFIAEPL
                     PGTVDYVSYYYMVGLVFLPLPFVEYTNEHIKVDLIHDLLPTGARTALDMLALALSAVF
                     YGLLTWQTWIDAVEKYLIGEQSMGMAAVTVWPGRFCLPLGAGLMVLLLLAKLIQRPFT
                     DAGMAGPNHDMYE"
     gene            complement(2002..2778)
                     /locus_tag="EYO87_15045"
     CDS             complement(2002..2778)
                     /locus_tag="EYO87_15045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009504570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase"
                     /protein_id="HIC67282.1"
                     /translation="MTSDITVEHSEGLAVVSLNRPDKLNALTLDMRVELLDAFRDIQT
                     DPRIRAVLLRAEGRAFCAGADISTMGKDDVWGDRARLYRAHQMILSIFNCEKPVVAAV
                     RGPAVGIGLSMALACDVILLSETARFGQVFRKIGLAPDGGAAFFLQNLIGRQRATDLA
                     FSARMVPADEALSLGLASQVHPDDALDRAALDYATDLAAGPTFALAGTKRLMRAAMQP
                     SLESFLETEAIIQGQIIKSADHAEGIDAFLSKRKPVFRGV"
     gene            complement(2807..>3622)
                     /locus_tag="EYO87_15050"
     CDS             complement(2807..>3622)
                     /locus_tag="EYO87_15050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009504569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
                     /protein_id="HIC67283.1"
                     /translation="AAMSASLEPASDPQPEAGSDATAVTTSLRPDGDGFVLNGGKIFT
                     TFGDRADYLLVYARFCESKGARGIGTVLVHRKSPGVSVHILEQKMGARGCNECEIHFD
                     DVRVPSENVVTEGLAGNSSGFVRPLGVYNATRVGMGILALGVAEGAFDLARDYMKTRR
                     QFGKALSEMQGLQWMMSDMKVQIEAARSLCYTALSLIDRGQPDPTLSSIAKVQATEMA
                     QRVTHDAMQMFGGYGYFGSLPLERMVRDVRMLTITGGTTQIHKNGIARALFTD"
BASE COUNT          792 a         1176 c         1042 g          612 t
ORIGIN      
        1 cgccgctaga acggtcgtcg ccgccagcgc ggcaaacgca ttggtcagtt tcatgtggtc
       61 tcctcctctt tttcaagacc ccgctattgc gcggggttcg tcacggccgg gatggccaaa
      121 tcagttgccg agctctggca ggaacatgat cagttcggga aaggcgacca tgatgatcag
      181 gaccaccaca tccgcagcca aaaaccacaa aacacccttg aaaatcagtg aaatcgggac
      241 cgcatcaccg acgatgccct tgatcacgaa cacgttcagc cccaccggtg gggtgatcag
      301 agccatctcg accagcttgg ttgcaagcac gcccagccag atcaggctga tatggttcgc
      361 ctcgtagatc ggcagaagga tcggcagcgt cagcagcagg atgcccagcg gatcgaggat
      421 catgcccagc agacaaaaga tcacggccgt gccgaaaacc agcatcacat agctggcccc
      481 catatcaatc accaggtcgg tcatcgcttc ggggataccg ctgatcgcca gaaacctcga
      541 aaacaggttg gcaccgaccg cgatgatgaa gatcgccgca gtcatttttg cagtgtccat
      601 cagcgcgatc ctggaaactt tccagttcag ggtgccgcgc gccgccgcaa tcacgaagga
      661 caacgccgcc ccgacagccc cggcctgcgt gggtgtgaat atcccggtga acagaccgcc
      721 gaaaacgccc accaccagca agatcacggg ccatgtctcg ctcagggcct ccagccgttc
      781 ggaccatgtc gcgctttcgt cgagcgacgg cgcgagcgcg ggattgatcc acacacgaac
      841 gatgatcacg gcccagtacc ccagcatcgt cagtacgccc ggcacgatcg cggccagaaa
      901 cagcttgctg atcgcgacct cggcaaaaat accgtagatg atcagaagga tgctcggcgg
      961 gatgagcgac cccatggtgc cggctgcggc aaccacggcg gtactcagcc cgggatcgta
     1021 gtcgcgcttc agcatttccg gcaccgcgat ccggcccatt gccgcggcgc aggccaggct
     1081 ggagccggcc gccgccgaaa acagcgccgc gccgcccacg ctggcgaccg ccagcccgcc
     1141 cggcaggaat gacagccaga cccgggcggc cttgaagatc ccgcgcgtga tgtcggtctg
     1201 gtaacagacg tatcccatca acaggaacat cgggatcgaa ctgagggtcc agtgcgcggc
     1261 aaaatcatag ggcaccgccg tcagcaggcc gaaagccgcg ccgcttccca gcatcgccca
     1321 gaacccgaag aaggacacga tacccagcgc gaccgcgatc ggaacgcgca gcaagaccag
     1381 caggatgaca gaaacgatgc cgcaaaggcc gatctggaaa aagctcaccg ttccactcct
     1441 attcgtacat gtcgtgattg gggccggcca tgccagcgtc ggtgaaaggc ctctggatca
     1501 gcttggccag caagagcaga accatcagcc ccgcaccaag aggcagacag aagcgaccgg
     1561 gccagacggt caccgccgcc atgcccatgg attgctcgcc gatgaggtat ttttcgacgg
     1621 catcgatcca ggtctgccag gtgagcagcc cgtagaacac cgcagacagc gccagagcca
     1681 gcatgtcgag agcggtcctc gcccccgtcg ggagcagatc gtggatcagg tcgaccttga
     1741 tgtgctcgtt ggtgtattcg acgaagggaa gcggcagaaa gaccagcccg accatgtaat
     1801 aatacgacac gtaatccacc gtgcccggca ggggctcggc gatgaactgg ctcaggatga
     1861 catcgagcgt gacgtggacc atcatcaggg ccgccagggc agtcgcaata taggtgataa
     1921 tccgcgacac cctgccaagt cgtgcaatga ctgtttccat cactatctct tccctgtcgt
     1981 aaaaagggcc aatccgcttg gtcatacgcc acggaaaacc ggttttctct tgctcagaaa
     2041 ggcgtcgatg ccttcggcgt gatccgcgct cttgatgatt tgcccctgaa tgatggcttc
     2101 tgtttcaaga aagctctcca gagacggttg catcgcggcg cgcatcagcc gcttggtacc
     2161 ggccagggca aaggttggcc ccgcggccag gtctgtcgca tagtccaggg ccgcccggtc
     2221 gagggcatca tcgggatgaa cctggcttgc caatcccagg ctcagggctt catccgccgg
     2281 caccatccgc gctgagaagg caaggtccgt cgcacgttgc cgaccgatca gattctgaag
     2341 gaaaaacgcc gcgccgccat cgggggccag cccgatcttg cgaaaaacct gaccgaatct
     2401 tgccgtctcg gagagcagga taacgtcgca ggcgagcgcc atgctcagac cgatcccgac
     2461 cgccggaccg cgcaccgcgg caaccacagg cttctcgcaa ttgaatatgg aaaggatcat
     2521 ctggtgcgcc ctgtacaagc gcgcccgatc accccagaca tcgtccttgc ccatggtcga
     2581 aatatccgca cccgcacaaa aagcgcggcc ctcggcccgc agtaatacgg cgcgaatccg
     2641 cgggtcagtt tggatatcgc gaaacgcgtc caggagttcg acgcgcatgt cgagggtcag
     2701 cgcattcagc ttgtcgggcc ggttcaacga cacgacggcc agaccttctg agtgttccac
     2761 agtgatatcg cttgtcatga ccacccctcc ctttggcgaa gattcgtcag tcagtgaaca
     2821 gcgcccgagc aatcccgttc ttatgtatct gggtcgttcc cccggtgatc gtcagcatcc
     2881 gcacatccct caccatccgc tccaacggaa gcgaaccgaa atagccgtag ccaccgaaca
     2941 tctgcatggc gtcatgggtg acgcgctgtg ccatttcggt ggcctgaacc ttggcgatcg
     3001 aagacaatgt tggatcgggc tggccgcggt cgatcagcga cagcgccgta taacacaacg
     3061 accgcgcggc ctcgatctgc accttcatgt ccgacatcat ccattgcagc ccctgcatct
     3121 cggacagcgc cttgccgaat tgccggcggg tcttcatgta gtcgcgtgca aggtcgaacg
     3181 ccccctcggc gacaccaagc gccagtatcc ccatgccgac gcgcgtggcg ttatagacac
     3241 ccagcgggcg gacaaagccg ctggagttgc cggccagccc ttcggtcacg acgttttcgg
     3301 acggcacccg cacatcgtcg aaatggatct cgcattcgtt gcagccgcgc gcgcccatct
     3361 tctgttcaag aatatggacc gaaacgccgg ggcttttgcg gtgcaccaaa acggttccga
     3421 tgcctcgcgc gcctttgctt tcgcagaacc gagcatagac cagaaggtaa tcggccctgt
     3481 cgccgaaagt ggtaaagatc ttgccgccgt tcagcacaaa cccgtccccg tccgggcgca
     3541 gcgatgtcgt caccgcggtg gcgtccgacc cggcctcggg ctgcggatcg gacgcgggtt
     3601 cgagcgaggc gctcatagcc gc
//
LOCUS       DTVW01001139            1043 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2377877, whole
            genome shotgun sequence.
ACCESSION   DTVW01001139 DTVW01000000
VERSION     DTVW01001139.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1043)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1043)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1043
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2377877"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..926
                     /gene="zwf"
                     /locus_tag="EYO87_15055"
     CDS             <1..926
                     /gene="zwf"
                     /locus_tag="EYO87_15055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glucose-6-phosphate dehydrogenase"
                     /protein_id="HIC67284.1"
                     /translation="HYLGKETVQNLMAVRFANILFEPLWNAQYVDHVQITVAETVGVA
                     GRGGYYDRSGAIRDMVQNHMMQLLCLIAMEPPYHFDPDAVRDEKLKVIRALEPVEPSE
                     IVRGQYQAQGKDGGYVDDAENPDSRTESYVAMKVRISNWRWQGTPFYLRTGKKLRART
                     SEIAITFKEPPHSIFDETGAPKANELVIRLQPNEGMNLKVMIKEPGPGGMRLVQVPLD
                     MSFAEALGPEGAEMPDAYERLIMDVIRGNQTLFMRGDEVEAAWAWTDPIIAAWEDSKR
                     RPEPYDAGSSGPEEALRLMHRDNRRWREIRS"
     gene            923..>1043
                     /locus_tag="EYO87_15060"
     CDS             923..>1043
                     /locus_tag="EYO87_15060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphogluconolactonase"
                     /protein_id="HIC67285.1"
                     /translation="MSMEFKEYPDREMLALSLADRLASQLSQHLRAHEAASLCV"
BASE COUNT          207 a          319 c          346 g          171 t
ORIGIN      
        1 accattatct gggcaaggaa acggtgcaga acctgatggc cgtccggttc gccaacatcc
       61 tgttcgaacc cttgtggaac gcgcaatatg tcgatcacgt ccagatcacc gtggccgaga
      121 ccgtgggcgt tgccgggcgc ggcggctatt acgaccgatc cggcgcgatc cgggacatgg
      181 tccagaacca catgatgcag cttctgtgtc tgatcgcgat ggagccgccc taccatttcg
      241 accccgatgc cgtgcgcgac gagaagctga aggtgatccg cgcgctggag cctgtcgagc
      301 cgtccgagat cgtgcgcggc cagtatcagg cacagggcaa ggatggcggc tatgtcgatg
      361 acgcggaaaa tcccgattcg cgcaccgaaa gctatgtcgc gatgaaggtc cgcatctcga
      421 actggcgctg gcagggcacg cccttctatc tgcgcaccgg caagaagctg cgcgcccgga
      481 ccagcgagat cgcgatcacc ttcaaggagc cgccgcattc gatctttgac gagaccggcg
      541 cgcccaaggc gaacgagctt gtcatccggc tgcaaccgaa cgagggtatg aacctgaagg
      601 tgatgatcaa ggaaccgggg ccgggcggga tgcgtctggt gcaggtgccg ctggacatgt
      661 cctttgccga ggcgcttggc cccgaagggg ccgagatgcc cgacgcctac gaacggttga
      721 tcatggacgt gatccggggc aaccagaccc tgttcatgcg cggtgacgag gtcgaggccg
      781 cctgggcctg gaccgatccg atcatcgccg cgtgggagga cagcaagcgc aggcccgaac
      841 cctatgacgc gggatcctcg gggccggaag aagcgttgcg gctgatgcat cgcgacaacc
      901 gaaggtggag ggaaatccgg tcatgagcat ggagttcaag gaatatcccg accgcgagat
      961 gctggccctg tcgctggccg accggctggc ctcgcaactg tcccagcatc tgcgcgccca
     1021 tgaggccgcc agcctctgcg tgc
//
LOCUS       DTVW01001140            2207 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2380339, whole
            genome shotgun sequence.
ACCESSION   DTVW01001140 DTVW01000000
VERSION     DTVW01001140.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2207)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2207)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2207
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2380339"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..369
                     /locus_tag="EYO87_15065"
     CDS             <1..369
                     /locus_tag="EYO87_15065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphogluconate dehydratase"
                     /protein_id="HIC67286.1"
                     /translation="PRANGMPELHSLTPTLAVLQDRGLRVALVTDGRMSGASGKVPAA
                     IHISPEASVGGPLSRVHDGDMIRLDATMGTIDCLAEDFDNRKPAAFDPGPSSQGMGRE
                     MFAFFRANACDATEGAACVV"
     gene            complement(553..1014)
                     /locus_tag="EYO87_15070"
     CDS             complement(553..1014)
                     /locus_tag="EYO87_15070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009573919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low molecular weight phosphatase family protein"
                     /protein_id="HIC67287.1"
                     /translation="MSQDKIPHSILFCCDHNSVRSPMAEGMMKKFYGRAAYVQSAGVR
                     GGMDVDGFAISVCDEIGVVIANHRSRSFDEMQDWGDDLGGFDLIVALSPASQRLALEM
                     TRLYHLDIEYWPIMDPTGLAEGREARLAAYRQTRDQIRDRMIRRFGPPQIG"
     gene            complement(1019..1498)
                     /locus_tag="EYO87_15075"
     CDS             complement(1019..1498)
                     /locus_tag="EYO87_15075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013068266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0262 family protein"
                     /protein_id="HIC67288.1"
                     /translation="MSRITRIDIDDSAIAPATPEMEQERRVAIFDLIEDNSFVVPGRD
                     GLPVPEGPYVLQLCIREGRLVFDLATEDHRPVAEFHLSLGPFRQVVKDYFQICQSYFD
                     AVKKLPTAQIEAIDMARRGIHNEGARTLQERLQGKADLDIDTARRLFTLICALVPQA"
     gene            complement(1495..>2207)
                     /gene="hisD"
                     /locus_tag="EYO87_15080"
     CDS             complement(1495..>2207)
                     /gene="hisD"
                     /locus_tag="EYO87_15080"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013068267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HIC67289.1"
                     /translation="TIRPVDKITGPGNAFVAAAKKQVFGRVGIDMIAGPSEVLIIAEG
                     AQNPDWLALDLLAQAEHDADAQSILITTDPGLAHAVAGAVDRLLPTLPRAGIAGASWR
                     DYGTIIIARDLGEAADLSNRIAPEHLELCVDEPEALAERCIHAGAIFLGAHTPEAVGD
                     YVSGPNHVLPTARSARFSSGLSVLDFLKRTTMARLTPGALAAIGPAAVRLAAAEGLHA
                     HGASVEARLALLNERDEA"
BASE COUNT          379 a          743 c          712 g          373 t
ORIGIN      
        1 ccgcgcgcca acggcatgcc cgaactgcat tcgctgacgc cgacgctggc cgtgttgcag
       61 gatcgcgggc tgagggtcgc gctggtcacg gatgggcgca tgtcgggcgc gtcgggcaag
      121 gtgcccgccg cgatccatat ctcgcccgaa gcctcggtcg gcgggccgct gtcgcgggtc
      181 catgacggcg acatgatccg gctggatgcg acgatgggca ccatcgactg cctggcagag
      241 gatttcgaca atcgcaaacc cgcagccttc gaccccggcc ccagcagtca ggggatgggc
      301 cgcgagatgt tcgccttctt ccgcgccaat gcctgtgacg cgaccgaagg ggccgcctgc
      361 gtcgtctgag gcagagggcg ccaccggttc ctccgcgtcc cgcagggtgc ggcgcgactg
      421 ttcgccgaaa ttcagcgcag aactcggcgg cggtcgggat cacgcccagg atttcggacc
      481 gatccgaggc gatgccaagg acgcgatcgc gcccggcctg cgacctgaca cagcgccggc
      541 aaagccatcc attcatccga tctgcggcgg accgaaacgc cggatcatcc ggtcgcggat
      601 ctggtcgcgc gtctggcgat aagcggccag cctggcttcg cgcccctctg ccagcccggt
      661 cggatccatg atcggccagt attcgatatc cagatgatac agccgcgtca tttccagcgc
      721 cagcctctgg ctggccggag acagggcgac gatcagatcg aacccgccaa gatcgtcgcc
      781 ccaatcctgc atctcgtcga aactgcggct gcgatgattg gcgatcacga ccccgatctc
      841 gtcgcagacg ctgatcgcga agccgtccac atccatcccg cccctcaccc cggccgattg
      901 gacataggcg gcgcggccat agaatttctt catcatcccc tcggccatgg gcgaacggac
      961 ggaattgtgg tcgcagcaga acaggatcga atgcgggatc ttgtcctgcg acatcggatc
     1021 aggcctgcgg gaccagtgcg caaatcagcg tgaacagccg ccgcgcggtg tcgatgtcca
     1081 gatcggcctt gccctgaaga cgttcctgca aggtccgcgc gccctcgtta tggatgccgc
     1141 gacgggccat gtcgatggcc tcgatctgcg ccgtgggcag tttcttgacc gcgtcgaaat
     1201 agctttggca gatctggaag taatccttga ccacctgccg gaatggtccc agcgacaggt
     1261 gaaattcggc caccggtcga tgatcttcgg tggccagatc gaagaccagc cggccttcgc
     1321 ggatgcacaa ttgcagcaca taagggcctt cgggcaccgg caagccgtcc cggcccggca
     1381 ccacgaagct gttatcctcg atcagatcga agatcgcgac gcggcgttcc tgctccatct
     1441 cgggcgtcgc gggcgcgatg gccgagtcgt cgatgtcgat ccgtgtgatc cggctcatgc
     1501 ctcgtccctc tcattcagca gcgccagccg cgcctcgacg gatgcgccat gggcgtgcag
     1561 gccctcggcg gcggccagcc tgaccgcggc cgggccgatt gccgccagcg cgccgggcgt
     1621 cagccgcgcc atcgtcgtgc gtttcaggaa atccagcacc gaaagcccgg acgagaaccg
     1681 ggccgagcgt gcggtcggca gaacgtgatt cgggccgctg acataatcgc ccaccgcctc
     1741 gggcgtatgc gcgccaagga agatcgcgcc ggcatggatg catctttcgg ccagggcctc
     1801 gggttcatcg acgcagagtt ccagatgttc cggggcgatg cggttggaca ggtcggccgc
     1861 ctcgcccaga tcgcgcgcga tgatgatggt gccatagtcg cgccagcttg cacccgcgat
     1921 tcccgcgcgc ggcaaggtcg gcagcaatcg gtcaacggcg ccggcaacgg catgggccag
     1981 ccccggatcg gtcgtgatca ggatcgattg cgcatccgcg tcatgttccg cctgggccag
     2041 cagatccagc gccagccagt cggggttctg cgccccttcg gcgatgatca acacttcgga
     2101 cgggcctgcg atcatgtcga tgcccacacg gccaaagacc tgtttcttgg ccgcagcgac
     2161 aaaggcattg ccggggccgg tgatcttgtc caccgggcgg atcgtcc
//
LOCUS       DTVW01001141            1472 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2382142, whole
            genome shotgun sequence.
ACCESSION   DTVW01001141 DTVW01000000
VERSION     DTVW01001141.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1472)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1472)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1472
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2382142"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(491..1048)
                     /locus_tag="EYO87_15085"
     CDS             complement(491..1048)
                     /locus_tag="EYO87_15085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HIC67290.1"
                     /translation="MTGGGVIVRPASHDDDDAIWAILKPVYRAGQTYCIPRDITRDAA
                     LADWFAPPFTVFVAEIGGRILGTSHVGANRPAGGSHVANASFATDPAARGRGVARALV
                     ENAKIWAGRTGFAAMQFNFVVSSNADAVHLWQTSGFKIVGRLPGAFIHPQLGPVDAYV
                     MFHDLCGQGLAGDQGAAAKTPADSR"
     gene            complement(1045..>1472)
                     /locus_tag="EYO87_15090"
     CDS             complement(1045..>1472)
                     /locus_tag="EYO87_15090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999008.1"
                     /note="hydrolyzes proteins to small peptides; with the
                     ATPase subunits ClpA or ClpX, ClpP degrades specific
                     substrates; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-dependent Clp protease proteolytic subunit"
                     /protein_id="HIC67291.1"
                     /translation="DDPINMLISSPGGHVESGDMIHDVIKFIRPTVRTIGSGWVASAG
                     ALIFVGADRENRFCLPNTRFLIHQPSGGIGGTSSDMMIQAEQVRLMRDRLNQIFADAT
                     GQPLERIEKDTHRDFWLNTQEALDYGLLARVIRSVDELS"
BASE COUNT          259 a          475 c          506 g          232 t
ORIGIN      
        1 acaacccgat gcgggccctg ttggcgggat cggacacggc gctgagcgtt gcctggggcg
       61 ggcggccctc gtggctgctg cacgggatgg cgctgaacga gacgatcggt caggcacaga
      121 tgcgcacggt gaacaatgga aattaccggt ccggcggtct tgcctcgcgc gaatacgggg
      181 tcaccgggca atatgactgg atcaacccgg tctgggtgaa cctgatcggc gacccgacgc
      241 tgcggccctt tccgcagcgc ccggcgaccg gattcaccgc ccgccgcgcg ggcgacgacg
      301 tgcggctggg ctggtcgctg cccgatgacg cggaatcggc ggtgctgtac cgggccgaac
      361 gccgcgaggg cccctatgac gtgatcgccg aggatctcgg cggcaccgat ttcaccgacc
      421 ggaacgcgcc gccggccggc tggtacatgc tgcgcgccaa ggggctgacc cgggtcaatg
      481 caggttcggt ctatcggctg tcggcaggcg tcttcgcggc ggcgccctga tcacccgcaa
      541 gaccctggcc gcaaagatcg tgaaacatca cgtaggcgtc gacgggacca agctgcggat
      601 gaatgaaggc gcccggcagg cggccaacga tcttgaaacc ggatgtctgc cacagatgca
      661 ccgcgtccgc gttcgaggag acgacgaaat tgaactgcat cgcggcaaat ccggtccgtc
      721 cggcccagat cttggcattc tcgaccaggg ctcgggcgac gcccctgccc cgcgccgcag
      781 gatcggtcgc gaacgaggca ttggccacat gcgacccgcc ggcgggccgg ttcgcgccga
      841 catggctggt gcccaggatg cggccgccga tctcggccac gaagacggtg aagggtggcg
      901 cgaaccagtc ggccaaagcc gcgtcacggg tgatgtcgcg cgggatgcaa taggtctggc
      961 ccgcacgata gaccggcttc aggatcgccc agatggcgtc gtcgtcgtca tggctggcgg
     1021 ggcggacaat caccccgccg ccggtcatga caattcatcc acgctgcgga tgaccctggc
     1081 cagaaggccg taatccagcg cctcttgcgt gttcagccag aagtcgcggt gggtgtcctt
     1141 ctcgatccgt tccagaggct ggccggtcgc atcggcaaag atctggttca gccggtcgcg
     1201 catcaggcgg acctgttcgg cctggatcat catgtcggac gaggtgccgc cgatcccgcc
     1261 cgagggctgg tggatcagaa agcgcgtatt gggaaggcag aagcggtttt cccggtccgc
     1321 gccgacaaag atcagcgcgc ccgcgctggc cacccagccc gaaccgatgg tgcgcaccgt
     1381 cgggcggatg aacttgatca cgtcatggat catgtcgccc gattccacat gcccgccggg
     1441 cgaggaaatc aacatgttga tcggatcgtc gc
//
LOCUS       DTVW01001142            1393 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2383151, whole
            genome shotgun sequence.
ACCESSION   DTVW01001142 DTVW01000000
VERSION     DTVW01001142.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1393)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1393)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1393
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2383151"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..867)
                     /locus_tag="EYO87_15095"
     CDS             complement(<1..867)
                     /locus_tag="EYO87_15095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020039629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HIC67292.1"
                     /translation="MRLDIEDLEDRPSDQVPAIAERLQALIPTIYNHRCSVGEPGGFL
                     QRVRSGTWAGHMVEHVAIELQNLVGFSVGYGKTVDSYDPGIYNVVYRYRDEASGIAAG
                     EAAVQIVRKLYDGEDVDLTPIIDHLKEVRDANALGPSTGSIVNAARDRNIPAYNLTEG
                     TSYTQLGHGIKQRRFQATVTDASGIIGHSIADDKEWTKQILADAGVPVPRGQVCHSFE
                     EAQAAADWIGWPVVTKPLSGNHGRGVTTDIASVEDLRSGYDAAVARARDDHGGVIVEN
                     YIKGEDHRMLVIG"
     gene            complement(920..>1393)
                     /locus_tag="EYO87_15100"
     CDS             complement(920..>1393)
                     /locus_tag="EYO87_15100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020039630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyanophycinase"
                     /protein_id="HIC67293.1"
                     /translation="VIAGTSAGAACQSQTMVYGGAANDSLRKGAVKMTAGFGLVAGVI
                     IDTHFLERGRFSRLMEVGATNPEYLGIGLGEDAAVLFEEDVIHAFGPGHVILVDSSQV
                     TGSNVFSLADGEAVSVNNVIMHALVDGCGYSLTDRRVLGHDELRAKSLEHRIAYS"
BASE COUNT          258 a          459 c          402 g          274 t
ORIGIN      
        1 gccgatcacc agcatccggt gatcctcgcc cttgatatag ttttcgacga tgacaccgcc
       61 gtgatcgtcg cgggcacgcg cgaccgcggc atcatagcct gatctcaggt cctccacgct
      121 ggcgatatcg gtcgtgacgc cgcgtccgtg attgcccgac agcggcttgg tgacgaccgg
      181 ccagccgatc cagtcagccg ccgcctgcgc ctcttcgaag gaatggcaga cctgtccgcg
      241 cggcaccggc acaccggcat ctgccaggat ctgcttggtc cattccttgt cgtcggcgat
      301 cgaatgcccg atgattcccg aggcgtcggt caccgtggcc tgaaaccggc gctgcttgat
      361 gccgtggccc agctgggtat agctggtgcc ttcggtcagg ttgtaggcgg gaatgttgcg
      421 atccctggcg gcgttgacga tggatccggt cgacggcccc aaggcgttcg cgtcacgcac
      481 ctctttcagg tggtcgatga tcggcgtcag atcgacatcc tcgccgtcgt aaagctttcg
      541 aacgatctgc accgccgcct cgccggccgc gatgccgctt gcttcgtcgc gatagcggta
      601 gacgacattg tagatgcccg gatcatagct gtccacggtc ttgccgtaac ccaccgagaa
      661 gccgacaagg ttctgcaact cgatggcgac atgctcgacc atgtgcccag cccaggtgcc
      721 gctgcgcacc cgttgcagaa aaccgcccgg ctctccgacc gaacagcgat gattgtaaat
      781 ggtggggatc agcgcctgaa gcctttcggc gatcgccggc acctggtcgc ttggccggtc
      841 ttccaggtcc tcgatgtcca gccgcatgta gatggcttga taacggctgt aataattcgg
      901 tccgcgcaac gcgcgatgtt caagaatatg caatcctgtg ctccaggctc ttggccctga
      961 gctcatcgtg tcccaggact cgtcggtctg tcagactgta tccacagcca tcgaccagcg
     1021 cgtgcatgat gacgttattg acgctgaccg cctcgccgtc cgcgagactg aagacattcg
     1081 accctgtaac ctgggaactg tcaacgagga tcacgtgacc gggcccgaat gcatggatca
     1141 catcctcttc aaacaggacc gccgcatcct cgcccaagcc gatgcccaga tattcgggat
     1201 tggtcgcgcc gacctccatc agccgcgaga aacgcccgcg ttcgagaaaa tgggtatcga
     1261 taatgacccc cgccaccaga ccgaagccgg cagtcatctt gaccgcaccc ttgcgcaggg
     1321 aatcattggc agcaccgcca tagaccatgg tctgcgactg gcaggcagcg cccgcgctgg
     1381 tccccgcgat cac
//
LOCUS       DTVW01001143            1537 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2386029, whole
            genome shotgun sequence.
ACCESSION   DTVW01001143 DTVW01000000
VERSION     DTVW01001143.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1537)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1537)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1537
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2386029"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..189)
                     /gene="gltA"
                     /locus_tag="EYO87_15105"
     CDS             complement(<1..189)
                     /gene="gltA"
                     /locus_tag="EYO87_15105"
                     /EC_number="2.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005795494.1"
                     /note="type II enzyme; in Escherichia coli this enzyme
                     forms a trimer of dimers which is allosterically inhibited
                     by NADH and competitively inhibited by
                     alpha-ketoglutarate; allosteric inhibition is lost when
                     Cys206 is chemically modified which also affects hexamer
                     formation; forms oxaloacetate and acetyl-CoA and water
                     from citrate and coenzyme A; functions in TCA cycle,
                     glyoxylate cycle and respiration; enzyme from Helicobacter
                     pylori is not inhibited by NADH; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate (Si)-synthase"
                     /protein_id="HIC67294.1"
                     /translation="MAETKTAKLLIDNSDYELPILSPTEGPDVLDIRKLYGEAGVFTY
                     DPGFTSTASCDSTITFIDG"
     gene            complement(267..>1537)
                     /locus_tag="EYO87_15110"
     CDS             complement(267..>1537)
                     /locus_tag="EYO87_15110"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012178477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HIC67295.1"
                     /translation="RIEDTDRARSTPEATDAILKGLEWLGLDWDGEPLSQFARKDRHA
                     EVARDMLARGAAYRCYSTPDEIAAWREAHPREPFKSPWRDATDLPDAAYAIRLKAPQT
                     GETVIEDAVQGPVRVANDQLDDMVLLRSDGTPTYMLAVVVDDHDMGVTHVIRGDDHLT
                     NAARQIQIFDAMGWKRPVFAHIPLIHGEDGKKLSKRHGAVGLHEFATLGYPAGAMRNY
                     LARLGWSHGDDELFDDAQARHWFDLSGIGRAPARLDFRKLEHVSGHHIGAMEDDVLMQ
                     ALGDYLADTGAAPLSARHQERLRPVLPALKQKARTLPQLLEQGHFALIDRPVRMDDKA
                     TGMLDPVSRGMLKSLTAALQHASWQRDELEKAAKAVAEENGVGLGKLAAPLRASLAGR
                     TATPSVFDMMMALGRDETLARLQDQTELAG"
BASE COUNT          256 a          516 c          486 g          279 t
ORIGIN      
        1 gccgtcgatg aaggtgatcg tggaatcgca gcttgcggtc gaggtgaagc ccggatcata
       61 ggtgaaaacg cccgcctcgc catacagctt gcggatgtcc agaacgtccg gcccctcggt
      121 cggggacagg atgggcagtt cgtaatcgga attgtcgatc agcaatttgg cggtctttgt
      181 ctcggccatc caaaagtcct ttccggcttg gccgggtcgt ccgcgcgcga atattcggaa
      241 gacaacccgg aatgtgaaag cagggatcag cctgccaatt cggtctggtc ctgaagccgg
      301 gccagcgttt cgtcgcggcc tagcgccatc atcatgtcga acacgctggg ggtcgcagtc
      361 cggccggcca gagaagcgcg caggggcgcc gccagcttgc ccaacccgac gccgttttcc
      421 tcggcgacag ccttggccgc cttctccagc tcgtctcgct gccagctagc atgctgcagc
      481 gcggcagtca atgatttcag cataccacgg gataccgggt ccagcatccc ggtcgccttg
      541 tcatccatcc ggaccgggcg gtcgatcagc gcaaagtgcc cctgttccag caattgcggc
      601 agggtccggg ccttttgctt cagagccggc aggaccggtc gcagccgctc ctggtggcgc
      661 gcgctcagcg gggcggcgcc ggtatcggcc agataatccc caagcgcctg catcaggacg
      721 tcatcctcca tcgcgccgat atgatggccg ctgacatgtt ccagctttct gaaatccagc
      781 cgggcgggcg cgcgcccgat cccggacaga tcgaaccagt gccgtgcctg cgcgtcatcg
      841 aacaactcgt catcgccatg gctccagccc agacgcgcca ggtaattgcg catcgccccg
      901 gccggatagc cgagcgtcgc gaattcgtgc aggccaaccg cgccgtggcg tttcgacagt
      961 ttcttgccat cctcgccatg gatcagcggg atgtgggcga aaaccggccg cttccagccc
     1021 atcgcgtcga agatctggat ctggcgggcg gcgttggtca ggtgatcgtc gccccggatc
     1081 acatgggtca cgcccatgtc gtgatcatcc accacgaccg ccagcatgta ggtcggggtt
     1141 ccgtcgctgc gcaacagcac catgtcgtcc agctgatcat tggccacgcg gaccgggccc
     1201 tgcacggcgt cctcgatcac cgtctcgccg gtctgcggag ccttgaggcg gatcgcatag
     1261 gcagcatccg gcaggtcggt cgcgtcgcgc cacgggctct tgaaaggctc gcgcggatgc
     1321 gcctcgcgcc aggcggcgat ctcgtcgggg gtggaatagc acctgtaggc cgcgccacgc
     1381 gccagcatgt cacgcgcaac ctcggcatgg cggtccttgc gggcaaactg gctgagcggt
     1441 tcgccatccc agtccaggcc cagccattcc agccccttca gaatcgcgtc cgtcgcctcg
     1501 ggggtggatc gcgcgcggtc ggtatcctcg atccgca
//
LOCUS       DTVW01001144            1836 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2386357, whole
            genome shotgun sequence.
ACCESSION   DTVW01001144 DTVW01000000
VERSION     DTVW01001144.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1836)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1836)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1836
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2386357"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1080
                     /locus_tag="EYO87_15115"
     CDS             <1..1080
                     /locus_tag="EYO87_15115"
                     /EC_number="2.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013069145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acyltransferase"
                     /protein_id="HIC67296.1"
                     /translation="AAKAALERAGLPPEKIGTTVFGNVINTEPRDMYLSRVAAIEAGV
                     PDTSPAMNVNRLCGSGVQAIVSATQVLMLGEADFALAGGAECMSRAPYILPQLRFGQK
                     MGDAGATDMLTGTLTCPFGTGHMGVTAENIAREQQISRQDQDAFALESQNRAARAIAE
                     GRFKREIVPVEIGGRKGPIIFDTDEHPKATSMEKLAALPPAFAKAGSVTAGNASGIND
                     GAAAIVLAREGAASAQGLTPRARILGFATAGVRPDVMGYGPIPAVELLCSRNGLKIED
                     FDVIESNEAFAAQALAVNRGLGLDPEKVNPNGGAVALGHPVGATGVILAVKALYELDR
                     VNGRRALITMCIGGGQGIALAFEKI"
     gene            1110..>1836
                     /locus_tag="EYO87_15120"
     CDS             1110..>1836
                     /locus_tag="EYO87_15120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009561373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HIC67297.1"
                     /translation="MKVQNLAAIVTGGGSGLGEATALALAEAGAKVAILDFNEDAALA
                     VASRIGGIGIRCDVSDEKSVATALLAAANANGAAHILVNCAGVAPARKILGRDGAMPL
                     DEYRRVIDTNLVGTFNVLKQFAETASARDALDTGERGVIVNTASVAAYEGQIGQSAYA
                     SSKAGVVGLTITAAREFARDGIRVCTIAPGIFETAMLRGLPEAAQESLGQSVPFPSRL
                     GRPEEFAALVLHIVQNEMLNGETI"
BASE COUNT          396 a          508 c          576 g          356 t
ORIGIN      
        1 gccgcaaagg ccgcgcttga gcgtgctggt cttccaccgg agaagatcgg aacaacggta
       61 ttcggcaatg tcatcaatac cgagccgcgc gacatgtatc tgtcgcgcgt cgccgcaata
      121 gaggccggcg tgcccgacac cagcccggca atgaacgtca accgtctttg tggcagcggg
      181 gtgcaggcga tcgtatcggc cacgcaggtc ctgatgctgg gtgaggcaga ttttgcactc
      241 gctggtggag ccgaatgtat gagccgcgcg ccttatatcc tgccgcaact ccgctttggc
      301 caaaagatgg gtgacgcggg cgcgactgac atgctgaccg gcacgctgac atgccccttt
      361 ggcaccggac atatgggcgt gacggccgaa aacatcgccc gcgaacagca aatcagccgg
      421 caagatcagg acgctttcgc actggaaagc cagaaccgcg ccgcacgcgc tatcgcggaa
      481 ggcagattca agcgcgaaat cgtcccggtc gagatcggtg gtcgcaaggg accaatcatc
      541 ttcgataccg acgagcaccc gaaggcgacc agcatggaaa aacttgctgc cctgccgcct
      601 gcatttgcca aggccgggtc agtcacggct ggcaacgcct cgggcattaa tgacggtgcc
      661 gcagccattg tgctggcgcg tgaaggcgcg gcaagtgctc aaggcctgac gccccgggcc
      721 cgcatcctcg gtttcgcaac cgcaggcgtt cggcccgatg tgatgggtta tggaccaatt
      781 ccggcggttg agctgctgtg cagtcgaaat ggtctcaaga ttgaagattt cgatgtaatt
      841 gaatccaacg aggctttcgc agcgcaggca ttggcagtga accgtggcct gggtctggac
      901 ccggaaaagg tcaatccgaa cggtggggca gttgcgttgg gacatcccgt cggtgcaacc
      961 ggcgtgatcc ttgcagtaaa ggcgctatac gaattggatc gggtcaatgg cagacgcgca
     1021 ctgatcacaa tgtgcatcgg cggaggtcag gggatagcgc tcgcgtttga aaagatctga
     1081 ctacgacagg aattaggagg agaccaaaga tgaaggtaca aaacctcgca gctattgtga
     1141 ccggcggcgg gtcaggtctg ggtgaagcga cagcgcttgc cttggctgag gcgggagcaa
     1201 aggttgccat cctcgatttc aacgaagatg cggcactcgc cgttgcttcc aggattggcg
     1261 gcatcggcat caggtgtgat gtttccgatg agaaaagcgt agccactgcg ctgctggccg
     1321 ctgctaatgc caatggagcg gctcacattc tggtaaactg tgctggagtt gcgcccgccc
     1381 gcaagattct cggtcgtgac ggcgcgatgc cattggacga gtatcgccgc gtaatcgaca
     1441 cgaacctggt tggaacattc aatgtcctta agcagttcgc tgaaactgcc agcgccagag
     1501 acgctctaga tactggagag cgcggtgtca tcgtgaatac ggcctcggtt gctgcctacg
     1561 aaggtcagat cgggcaatcc gcctatgcat cttcgaaggc cggcgttgtc gggctgacaa
     1621 tcaccgcggc ccgcgaattt gcccgtgatg gcatcagggt ttgcacgatc gcaccaggga
     1681 ttttcgaaac cgcaatgttg cggggactgc ccgaagccgc gcaagagagc ctcggtcaat
     1741 ctgttccatt tccctcacgc cttgggcgcc cggaggaatt tgcggcactg gtcctccata
     1801 ttgttcagaa cgagatgttg aatggagaga ccatac
//
LOCUS       DTVW01001145            2561 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2386465, whole
            genome shotgun sequence.
ACCESSION   DTVW01001145 DTVW01000000
VERSION     DTVW01001145.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2561)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2561)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2561
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2386465"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..178)
                     /locus_tag="EYO87_15125"
     CDS             complement(<1..178)
                     /locus_tag="EYO87_15125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HIC67298.1"
                     /translation="MAGFHGKPCWYELTTSKGNLAAAGDFYGAVLGWSIRDAGMDDFS
                     YHLASAGDDRVAGLM"
     gene            complement(189..905)
                     /locus_tag="EYO87_15130"
     CDS             complement(189..905)
                     /locus_tag="EYO87_15130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009175416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1428 domain-containing protein"
                     /protein_id="HIC67299.1"
                     /translation="MTYFWGFVQAVPTANKDAYTEHAQQAWPIFRKLGALRAVECWGE
                     DIPKGRQTDFYRATQCKEDETPVFSWIEWPDKATADKAGAQMQDHPDFQAMPPMPFDG
                     MRMFWGGFVPVYSFGASKPGSYVQGFVLAVPEKNKDAYVRMASSAEQMFRDKGATHMV
                     ENWGDDVPHGKVTDFYRAADAKEGETPVFSWIEWPDRATADKAAKEMEAEMAGADMGD
                     MPFDGMRMFWGGFVPVMDKS"
     gene            992..1684
                     /locus_tag="EYO87_15135"
     CDS             992..1684
                     /locus_tag="EYO87_15135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HIC67300.1"
                     /translation="MTTDGRTPRIRYDEGCLAAHALNVVGDRWALLIVREMLLGPKRF
                     QALRRGLPGITAAVMTQRLAQLAEAGVVAHDATLGIYALTESGRALLPVLQAMCRWGA
                     AHPGHDPRRFISPTALMISMTAMIDSTAAQGRDVAAAFVMPREGFVQRLSGDGVLRPE
                     VAPAPIGDFVLEGDGNRLAMAVYGPAPLADLSARGVIGLRGDADAAQRFVDLFRLRDG
                     RDRDQPGRAESS"
     gene            1827..>2561
                     /locus_tag="EYO87_15140"
     CDS             1827..>2561
                     /locus_tag="EYO87_15140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013066237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III PLP-dependent enzyme"
                     /protein_id="HIC67301.1"
                     /translation="MGEMKTVWDNPAEIIRNLQPEHPLMVFAPTVLQSRARTFLAGFP
                     GLVTYAVKSNPDEAVIQTLVSAGIRGFDVASPFEIDLIGRVAPRTARHYHNPVRARHE
                     IAHAVEAGIRAWSVDSLSELEKLFALVPAEIDGKGVEISPRFKLPVLGAAYDFGSKFG
                     ATPDLAAELLGQVARRGYVPSLTFHPGTQCVDPIAWESYISVAKEICDMAGVRAQRLN
                     VGGGFPSHRVIGVEPDLQSIFTEIADT"
BASE COUNT          431 a          830 c          806 g          494 t
ORIGIN      
        1 ccatcagccc cgccacccgg tcgtcccccg cgctggcgag gtgataggaa aagtcgtcca
       61 tgcccgcgtc ccggatcgac cagcccagaa ccgcgccgta gaaatctccg gcggcggcaa
      121 ggttgccctt gctggtggtc agttcatacc agcaaggctt tccatgaaat ccggccatct
      181 gctcctcctc agcttttgtc catgacgggc acgaagccgc cccagaacat gcgcattccg
      241 tcaaagggca tgtcgcccat gtccgcgccg gccatttcgg cctccatttc tttcgcggcc
      301 ttgtcggcgg tggccctgtc gggccattcg atccaggaaa agaccggtgt ctcgccctcc
      361 ttcgcgtcgg cggcacggta gaagtcggtc accttgccat gcggcacgtc gtcgccccag
      421 ttctcgacca tgtgggtcgc acccttgtcg cggaacatct gctcggcgct gctggccatc
      481 ctgacatagg catccttgtt tttctcgggg acggccagaa cgaagccctg gacatagctg
      541 ccgggcttcg acgcgccgaa gctgtagaca ggcacgaagc cgccccagaa catccgcatt
      601 ccgtcgaaag gcatcggcgg catggcctga aaatcaggat gatcctgcat ctgcgcccct
      661 gccttgtcgg ctgtggcctt gtcgggccac tcgatccagg aaaagaccgg ggtctcgtcc
      721 tccttgcact gggtcgcacg atagaaatcg gtctgcctgc ccttcggaat gtcttcgccc
      781 cagcattcga ccgcgcgcaa ggcgcccaac ttcctgaaga tcggccatgc ctgttgcgca
      841 tgttcggtat aggcgtcctt gttcgcggtc ggtaccgcct gaacgaaacc ccagaaatac
      901 gtcattttcc cctccatttc ggcgcgacga cgcgcccgcg aatcgcattc tgcgtcttgt
      961 ggtattaaaa aacaacttat agtatcaaga aatgactacc gacggccgaa ctccgcgcat
     1021 ccgatatgac gagggatgcc ttgccgccca cgcgctgaat gtcgtgggcg atcgctgggc
     1081 gctgctgatc gtccgcgaga tgctgctggg cccgaagcgc ttccaggccc tgcgccgtgg
     1141 cctgcccggg atcacggcgg cggtgatgac gcagaggctg gcacaactgg ccgaggctgg
     1201 ggtggtcgcg cacgacgcga cactgggcat ctatgcgctg accgaaagcg gacgggcgct
     1261 gctgccggtg ttgcaggcga tgtgccgctg gggtgcggcc catcccggcc acgatccgcg
     1321 gcgtttcatc agcccaaccg cgctgatgat ctcgatgacg gcgatgatcg atagcacggc
     1381 cgcgcaaggg cgcgatgtcg cggcggcgtt cgtcatgccg cgcgagggtt tcgtgcagcg
     1441 cctgtcgggc gatggtgtcc tgcgccccga ggtcgcgcct gcgcccattg gcgatttcgt
     1501 gcttgaaggg gatggcaacc ggctggcgat ggcggtctat ggtcccgcgc ccctggccga
     1561 tctgtccgcg cgcggcgtga tcggactgcg cggcgacgcc gatgcggcac agcgtttcgt
     1621 ggatctgttc cggttgcgcg acggtcgtga ccgcgatcaa ccggggcgcg cggaatcttc
     1681 gtgaaatcgt tgccggtttc gggctatgga ccgccgaaat ccgcgattcg cgcccttttc
     1741 cccgtgaaac tggaacagca aggtgccgat tggggttttc cacgcggccc tggccgaacc
     1801 gaacgatacg cgaaaggatc ccgccgatgg gagaaatgaa gacagtctgg gacaatccgg
     1861 ccgagatcat ccgcaatctt cagcccgaac atccgctgat ggtgttcgcc ccgaccgtgc
     1921 ttcaaagccg cgcccggacc tttctggcag gctttccggg attggtgacc tatgccgtca
     1981 agtcgaaccc cgacgaggcc gtgatccaga cccttgtcag cgccgggatc aggggattcg
     2041 acgtggcatc tcctttcgag atcgacctga tcggccgtgt cgcaccccgc accgcgcgcc
     2101 attaccacaa ccccgtccgc gcccggcacg agatcgccca tgcggtagag gccgggatca
     2161 gggcatggtc ggtggacagc ctcagcgaac tggaaaagct gttcgccctg gtgcctgccg
     2221 agatcgatgg caagggggtc gagatttcgc cccgcttcaa gctgccggtt ctgggcgcgg
     2281 cctatgattt cggctcgaag ttcggcgcga cgccggatct ggcggccgag ttgctggggc
     2341 aggtggcccg tcgcggctat gtgccctcgc tgaccttcca tccgggcacg caatgcgtcg
     2401 atccgattgc ctgggaaagc tatatcagcg tggcgaagga aatctgcgac atggcgggcg
     2461 tccgggcgca acggctgaat gtcggcggcg gtttcccctc gcatcgggtc attggcgtcg
     2521 agcccgacct gcaatccatc tttacggaga tcgccgatac g
//
LOCUS       DTVW01001146            1269 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2386731, whole
            genome shotgun sequence.
ACCESSION   DTVW01001146 DTVW01000000
VERSION     DTVW01001146.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1269)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1269)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1269
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2386731"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1049
                     /locus_tag="EYO87_15145"
     CDS             <1..1049
                     /locus_tag="EYO87_15145"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011749947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="CTP synthase"
                     /protein_id="HIC67302.1"
                     /translation="IGLAPDVLVCRSEHPIPEKERAKIALFCNVRPDAVIPAYDLKTI
                     YEAPLAYHRAGLDRAVLDAFRISPAPRPDLSKWEDVMDRLDNAEGRVNIAVVGKYTQL
                     EDAYKSIAEALTHGGMANRVRVRADWVDSEKLEGEGAHLLDGYHGIIVPGGFGERGTE
                     GMIAAAKYAREKDVPYLGICLGMQMAVIEAARNLADMPDAGSEEFDHEAGKTRFTPVV
                     YHLKEWIQGNYTVQRKVGDDKGGTMRLGAYTAILAEGSKISQIYGGAREMEDRHRHRY
                     EVDATFREALEAAGLSFSGMSPDGKLPEVIEYPDHPWFIGVQSHPELKSKPFAPAPLF
                     AGFVRAAMEEGRLV"
BASE COUNT          243 a          402 c          404 g          220 t
ORIGIN      
        1 cgatcggtct tgcgccggac gtgctggtct gccggtccga acacccgatc ccggaaaagg
       61 aacgcgccaa gatcgcgctg ttctgcaatg tgcgtcccga tgccgtaatc ccggcctatg
      121 acctgaaaac catctacgaa gcgcccttgg cctatcaccg ggcgggtctg gaccgcgccg
      181 tgctggacgc gttccggatc agccccgcgc cccgccccga cctgtcgaaa tgggaagacg
      241 tgatggaccg gctggacaat gccgagggcc gcgtcaacat cgccgtcgtg ggcaaataca
      301 cgcagctcga agacgcctac aagtccatcg ccgaggcgct gacccatggc ggcatggcca
      361 accgcgtccg cgtcagggcc gattgggtgg acagcgaaaa gctggagggc gaaggcgcgc
      421 atctgctgga cggctatcac gggatcatcg tgccgggcgg cttcggcgag cggggcaccg
      481 agggcatgat cgcggcggcg aaatacgccc gcgagaagga cgtgccctat ctgggcatct
      541 gtctggggat gcagatggct gtgatcgagg ccgcgcgcaa tctggccgac atgccggacg
      601 cgggttccga ggaattcgac cacgaggcgg gcaagacgcg cttcacgccg gtggtctatc
      661 acctgaaaga atggattcag gggaactata ccgtgcagcg caaggtcggc gacgacaagg
      721 gcggcacgat gcggctgggc gcctataccg caatcctggc cgaaggatcg aagatcagcc
      781 agatctatgg cggcgcgcgc gagatggagg accggcaccg ccaccgctat gaggtggacg
      841 cgaccttccg cgaggcgctg gaggcggcgg gcctgtcctt ctcgggcatg tcaccggacg
      901 gcaagcttcc cgaggtgatc gagtatcccg accacccctg gttcatcggc gttcagtcgc
      961 atccggaact gaaatccaag ccctttgctc cggcgcctct gtttgcgggc ttcgttcgcg
     1021 cggcgatgga agaagggcgg ctggtttagc ggccacctct tccactcata aacgatgtgc
     1081 tatctctcca cttcgagcgt gcggccatca agatagccat tcagccacgc tccgcgatta
     1141 taattcccgg ggccagatcc cgattccgcg tgcagttcga caacaacagt ccgcggcatt
     1201 tccaaccgat actctactcc ggccactgct acaggcacgt tgatcatctg gccgtttctg
     1261 attctcgcc
//
LOCUS       DTVW01001147            2344 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2388377, whole
            genome shotgun sequence.
ACCESSION   DTVW01001147 DTVW01000000
VERSION     DTVW01001147.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2344)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2344)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2344
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2388377"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            241..1083
                     /locus_tag="EYO87_15150"
     CDS             241..1083
                     /locus_tag="EYO87_15150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009825770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HIC67303.1"
                     /translation="MAKIFFPRSKDAAGRGPGGLREVHRQRRFASLRAIMALVLREMA
                     NSYGSSPGGYLWAIAEPVGGIMLLTLIFSLGFRTPPMGTNFAIFYATGVIPFIGFLSV
                     SGRIAQSIKSSRALLDYPAVTFMDALLAKVFFNVITQLLVAYIVFSFIVTTQETRTDP
                     QVIGIALAFLMVFTIAIGVGTVNCFLFTAFPWWQQIWSIVTRPLFLLSAIFFIYDDVP
                     DAMQKWIWYNPLVHVVGQMRRSFYPSYPGDYISYLYVFGVGLVLILVGLAFLQRYHRD
                     LINS"
     gene            complement(1158..2177)
                     /gene="choV"
                     /locus_tag="EYO87_15155"
     CDS             complement(1158..2177)
                     /gene="choV"
                     /locus_tag="EYO87_15155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008330586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="choline ABC transporter ATP-binding protein"
                     /protein_id="HIC67304.1"
                     /translation="MTDETPNAVEFDKVSIVFGDRPEAALPLMDEGQDRGPIKEKTGQ
                     VLGVHDCSVNVRQGEILVLMGLSGSGKSTLLRAVNALNHVCRGEVRVWDGSGMISVTG
                     AGRRSLRDIRLRHVAMVFQQFGLLPWRTVRENVGLGLELAGMSVKQRRDKVDRQLETV
                     GLSDWADRKVGELSGGMQQRVGLARAFATDAPILLMDEPFSALDPLIRARLQDELLEL
                     QAKTQRTIIFVSHDLDEAFKLGNRIALMEGGRIVQIGTAREIIANPVNDYVADFVAHM
                     NPLGVLTASDVAQPGEAQGTPVPRDMPVRDVMNLLAQTTALPVEGGGCVTRDGVLARL
                     IDPRG"
     gene            complement(2174..>2344)
                     /locus_tag="EYO87_15160"
     CDS             complement(2174..>2344)
                     /locus_tag="EYO87_15160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010139631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="choline ABC transporter permease subunit"
                     /protein_id="HIC67305.1"
                     /translation="SLSMVVIAALVGASGLGVPVVRALNSVNTSLGFESGFVIVVVAI
                     LLDRMLRMEGRK"
BASE COUNT          377 a          814 c          706 g          447 t
ORIGIN      
        1 gcgggccgct gatggtcggc tccgcgctgc aggaaggcgg gcctgtcgcc gtcctctgcc
       61 tgcgccgagg ggggctcgac cggctggccg gatcgcgggg tcttttctgg ggcggacatg
      121 gctgctcact cccgcctgtc ggttgaactg tcgccgggtg tcatacataa agagaccgcg
      181 ctatgccagc gccgatcctg ttgcgggatc gtcttctcca acggcagcga gccgcaggcc
      241 atggccaaga ttttctttcc gcgaagcaag gacgcagcgg ggcgtggccc cggcggcctg
      301 cgcgaggtgc acagacagcg ccgcttcgcc agcctgcgcg ccatcatggc gctggtgctg
      361 cgcgagatgg ccaattccta tggcagttcg cccggcggtt atctgtgggc catcgccgag
      421 cctgtcggcg gcatcatgct gctgacgctg atcttctcgc tggggttccg gacgccgccg
      481 atgggaacca atttcgcgat cttctacgcc accggcgtga tccccttcat cggcttcctc
      541 tcggtctcgg gccggatcgc gcagtcgatc aagtcctcgc gtgcgcttct ggattatccg
      601 gccgtgacct tcatggacgc gctgctggcc aaggtgttct tcaatgtcat cacgcagttg
      661 ctggtcgcct atatcgtctt cagcttcatc gtgacgacgc aagagacccg caccgatcca
      721 caggtcatcg ggatcgcgct ggccttcctt atggtcttca cgatcgccat cggagtgggc
      781 acggtgaact gcttcctgtt cacggccttt ccgtggtggc aacagatctg gtccatcgtc
      841 acccggccgc tgttcctgct gtcggccatc ttcttcatct atgacgatgt gccggacgcg
      901 atgcagaaat ggatctggta caatccgctg gtccatgtcg tcggccagat gcggcgttct
      961 ttctacccgt cctatccggg cgactacatc agttatctct atgtgttcgg agtcggcctg
     1021 gtcctgattc tggtcggtct ggcatttctg caacgctatc accgcgatct gatcaacagt
     1081 tgacggcaca ggcctgacca gggccgactg ccagccgcgg agggtccgcg gcggaaaggc
     1141 cgcctgcgcc gcgcgcctca gccgcgcggg tcgatcagcc gggccagcac gccgtctcgg
     1201 gtgacgcagc cgccaccctc gaccggcagc gcggtcgtct gcgccagcag attcatcacg
     1261 tcgcgcaccg gcatgtcgcg cggcaccggc gtgccctggg cctcgcccgg ctgcgccacg
     1321 tccgatgcgg tcagcacgcc cagcgggttc atgtgcgcca cgaaatcggc cacataatcg
     1381 ttgaccgggt tggcgatgat ctcgcgcgcg gtgccgatct ggacgatgcg gccgccctcc
     1441 atcagcgcga tccggttgcc cagcttgaag gcctcgtcca gatcatggct gacgaagatg
     1501 atggtgcgct gcgtcttggc ctgcaattcc agcaattcat cctgcaaccg cgcgcggatc
     1561 agcggatcca gcgcgctgaa aggctcgtcc atcagcagga tcggcgcatc ggtggcgaag
     1621 gcgcgggcca gacccacgcg ctgctgcatt ccacccgaca attcgcccac cttgcggtcg
     1681 gcccagtccg aaagacccac ggtttcaagc tgtcggtcca ccttgtcccg gcgctgcttg
     1741 acggacatgc cggccagttc cagccccagc ccgacattct cgcgcacggt gcgccagggc
     1801 agcaggccga attgctgaaa caccatcgcg acatggcgca gccggatatc gcgcaaggac
     1861 cgtcgccccg cgccggtgac cgagatcatg cccgacccgt cccagacccg gacctcgccg
     1921 cggcagacat ggttcaacgc attgaccgcg cgcagcaggg tggatttgcc cgaacccgac
     1981 agtcccatca gtaccagaat ctcgccctgg cggacattca cgctgcaatc gtgcacgccc
     2041 agaacctgcc cggtcttttc cttgatcggg ccacggtcct gcccctcatc catcagcggc
     2101 agggcggctt ccggcctgtc gccgaagacg atgctgacct tgtcgaattc gacggcattc
     2161 ggtgtctcgt cggtcatttc cgcccctcca tgcgcagcat ccggtccagc aggatcgcga
     2221 cgaccacgat cacgaagccc gattcgaaac ccagcgacgt attgacgctg ttcagcgccc
     2281 tgaccaccgg cacgcccagc cccgatgcgc ccaccagagc cgcgatcacc accatcgaca
     2341 gcga
//
LOCUS       DTVW01001148            1396 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2388713, whole
            genome shotgun sequence.
ACCESSION   DTVW01001148 DTVW01000000
VERSION     DTVW01001148.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1396)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1396)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1396
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2388713"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..897)
                     /locus_tag="EYO87_15165"
     CDS             complement(<1..897)
                     /locus_tag="EYO87_15165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017928472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C4-dicarboxylate ABC transporter
                     substrate-binding protein"
                     /protein_id="HIC67306.1"
                     /translation="MSRFFSGAICALGLTAGAASAQTTLFFGEAGPNRGARAEAITYF
                     VDQVSELSGGDLTFDVQWGGALFKAGAARGGIADGIADAGTIIGVYFPQEMAGYGIAD
                     LPINNPDAWVGMKATDELMRTNEQVQQNLAEQNLVYIGTFTTSAVNIGCKGATIRSVD
                     DISGLKVRGVGAYGKAFADVGANLVSMSIYDAYQGLDSGLIDCSQGYSYVVPALQWQE
                     VIDSYTLLNWGQVGALGIFMNKDMFDSLTEEQQGVLMEAGGMIPDELGRILSTDNEEA
                     VAMMKEKGIEVVELPDEERQKLI"
     gene            complement(1220..1325)
                     /locus_tag="EYO87_15170"
                     /pseudo
     CDS             complement(1220..1325)
                     /locus_tag="EYO87_15170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011102826.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
BASE COUNT          263 a          442 c          408 g          283 t
ORIGIN      
        1 gatcagcttc tgacgttcct cgtcgggcag ttcgaccacc tcgatgccct tctccttcat
       61 catcgccacc gcctcttcgt tgtcggtgct gaggatccgg ccaagctcat cggggatcat
      121 gccgccggct tccatcagga cgccctgctg ctcttcggta agggagtcga acatgtcctt
      181 gttcatgaag atgcccaggg cgccgacctg gccccagttt agcagggtat agctgtcgat
      241 cacctcctgc cactgcagcg ccggcacgac gtagctgtag ccctgagagc agtcgatcag
      301 tccggaatcc aggccctgat aggcgtcgta gatcgacatc gacaccaggt tggcgcccac
      361 gtcggcgaag gccttgccat aggcgcccac gccgcggacc ttgaggccgg aaatgtcgtc
      421 cacgctccgg atcgtggccc ccttgcagcc gatattgacc gccgatgtcg tgaacgtgcc
      481 gatatagacc aggttctgtt cggccaggtt ctgctgcacc tgttcgttcg tgcgcatcag
      541 ctcgtcggtc gctttcatgc cgacccaggc atcggggttg ttgatcggca ggtcggcgat
      601 gccgtagccg gccatctcct gcgggaaata caccccgatg atagtcccgg catccgcgat
      661 accgtccgcg atgccgccgc gcgccgcacc ggccttgaac agcgctccgc cccactgaac
      721 gtcaaaggtc agatcgccgc ccgaaagctc ggagacctga tcgacgaaat aggtgatggc
      781 ctctgcccgc gcgccgcgat tcgggcccgc ctctccgaag aacagcgtgg tctgggccga
      841 cgcggccccc gccgtgagac cgagcgcaca gatcgcgccg gaaaaaaatc tggacatggt
      901 gttctctctg actgtcatgg ctccaattct gcatagcaga atttcgttct gctaattaga
      961 atactaggcg ggccatgcac ctttagcaac cctgcgtcac gcccgttgca atgctctgcg
     1021 gagccgaaga tatcaggtca ccgcggcctt gttgcgtaaa agcgctgaag gccgagtgcc
     1081 ccctttcttc cgttgaggtc agccgatggg ccgcgtgacg gggattccaa gggcggtgta
     1141 gcggatgagg attatgatgc cacacgactc tgttgcgcag ttcggctgtt cggcgaggtt
     1201 cccctatctc cggacagact tatcccacga cctcagtgac aggtatgccg agcgcggtgt
     1261 agccgttcag gacggcttat gcggatctgg agttcagcga cctgacggtc gaagtccctc
     1321 tgaaccgcac cgggtttgcc ggaggctcca actcatgagc aggatggagc atcatgacaa
     1381 agacaacaaa caagta
//
LOCUS       DTVW01001149            1748 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2388889, whole
            genome shotgun sequence.
ACCESSION   DTVW01001149 DTVW01000000
VERSION     DTVW01001149.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1748)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1748)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1748
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2388889"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(116..487)
                     /locus_tag="EYO87_15175"
     CDS             complement(116..487)
                     /locus_tag="EYO87_15175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67307.1"
                     /translation="MTDEIVETGAPAPGEQSSGWADALPALVLLVLGLAGLATATILT
                     STVPGQYLILARPGTATGAILDMVYRARGGIVGFGGLPGIALAASDDPGFAEAVRAEG
                     AWIVLPSPKLLGCFGPPGRDL"
     gene            829..1239
                     /locus_tag="EYO87_15180"
     CDS             829..1239
                     /locus_tag="EYO87_15180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007427898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HIC67308.1"
                     /translation="MFRRYPLLIALSVGLALATSVGAQQTNADTLKIYFQTGSAGISS
                     DGRGTLDQAARLFRDGNPIVMIVAGGADTVGKPDYNLRLSIRRAQAVADGLVERGIPV
                     DRLQVLGRGTSELAVETDDGIAKRENRVVEISWR"
     gene            1187..>1748
                     /locus_tag="EYO87_15185"
     CDS             1187..>1748
                     /locus_tag="EYO87_15185"
                     /inference="COORDINATES: protein motif:HMM:PF08238.10"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sel1 repeat family protein"
                     /protein_id="HIC67309.1"
                     /translation="MTASPNEKIALSKFLGDRGCQSVWAGALSLSLGLALSAGADPLG
                     DGQQAFEARDFARADAVWQAAADEGSAEAMVRLGLLRDLGLGGPRDAAAALALYLKAA
                     RLGLAEAQFNAAVLLDSGDGVARDPRAAAGWYGRAAANGHVRARYNLGLILAAGDGVP
                     RNADLARYWLEDVGGDLPAAADRLANL"
BASE COUNT          293 a          540 c          617 g          298 t
ORIGIN      
        1 accgacatga ccttgttcca tgccgccgcc gcgcccagca ccggcacatg cgcccacagc
       61 agccagacca gaagcgcgcc gaaacgttcg cgcaagcgat gaatttcggc gttcatcaca
      121 gatctcttcc ggggggaccg aaacagccca gcagcttggg cgagggcaga acgatccagg
      181 cgccttcggc acggacggcc tccgcgaaac ccggatcgtc tgatgcggca agggctattc
      241 cgggaagtcc gccgaagccc acgatgccgc cgcgcgcgcg atagaccatg tccaggatcg
      301 ccccggtcgc cgtcccgggt cgtgccagga tcagatattg cccgggaacg gtgctggtca
      361 gaatggtggc cgtcgccagt cctgccagcc ccagcaccag caggaccaga gcgggcaggg
      421 catcggccca accgctgctc tgttcgccgg gggcgggtgc cccggtttcc acgatttcat
      481 ccgtcactgc ccacccattc gcgctgccga gacttgcaat gtttgcacac tagcgcaggg
      541 gggctgtccg atccgttaat ggctggccgg aaaaccatga aagtttgtcg cgcttcggac
      601 gggcgcggcg gcgcggtcgt cgcgccccgg ttgcgatcgg acgggcggcg gcgcgattcg
      661 cgcgcgcgac cggcgggttt cgctcagaag gcgaggcgca agggatcggt tctctgcaag
      721 atagaaatga acagcgaaaa gccgcggaaa cccggccgaa caccaaatct tgtaaggaca
      781 tcggccatgt ggggattagg cttgcggggt caggtgaaag gtagcttcat gttcagacga
      841 tatcccctct tgattgctct cagcgtcggc ctggcgcttg caacctccgt cggcgctcag
      901 cagacgaatg cagacacatt gaagatttat tttcagaccg gcagcgccgg catctcctcc
      961 gatgggcgcg gcacgcttga tcaggcggcg cgcctgttcc gggacggcaa ccccatcgtc
     1021 atgatcgtgg ccgggggggc ggatacggtc ggcaagcccg attacaatct tcgcctgtcg
     1081 atccggcgcg cgcaggccgt ggccgacggc ctggtggaaa gaggcattcc cgtcgatcgg
     1141 ttgcaggtcc tgggacgcgg cacgagcgaa ttggccgtcg agaccgatga cggcatcgcc
     1201 aaacgagaaa atcgcgttgt cgaaatttct tggcgataga ggctgccagt cggtctgggc
     1261 cggtgcgctg tctctatccc ttggcctggc gctgtccgcc ggggcggatc cgcttggaga
     1321 tggccagcag gctttcgagg ctcgcgactt cgcccgcgcc gatgcggtgt ggcaagccgc
     1381 ggcggacgag ggttcggccg aggcgatggt gcggctgggg ctgttgcgcg atctgggcct
     1441 gggcgggccg cgcgatgccg ccgccgcgct ggctctgtat ctgaaggccg ccagacttgg
     1501 actggccgag gcgcaattca acgcggcggt gctgctggat tccggcgacg gcgtggcgcg
     1561 cgatccccgg gcggcagcgg gttggtatgg tcgggccgcg gcgaacgggc atgtcagggc
     1621 acgctataac ctggggctta tccttgctgc gggtgacggg gtgccgagga acgcggatct
     1681 tgcccgctac tggctggagg atgtgggcgg cgacctgccg gcggcggcgg atcggctggc
     1741 aaatctgg
//
LOCUS       DTVW01001150            2562 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2390807, whole
            genome shotgun sequence.
ACCESSION   DTVW01001150 DTVW01000000
VERSION     DTVW01001150.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2562)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2562)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2562
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2390807"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..288)
                     /gene="rpsP"
                     /locus_tag="EYO87_15190"
     CDS             complement(<1..288)
                     /gene="rpsP"
                     /locus_tag="EYO87_15190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019296654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
                     /protein_id="HIC67310.1"
                     /translation="MAVKIRLARGGSKKRPHYAIVVADTRKPRDGRFLEKLGTYNPLL
                     PKDSEDRVKMDMERVQHWLDHGAQPTDRVARFLESAGVRDKADRKNMKKAEP"
     gene            complement(334..630)
                     /locus_tag="EYO87_15195"
     CDS             complement(334..630)
                     /locus_tag="EYO87_15195"
                     /EC_number="5.4.99.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005849985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate mutase"
                     /protein_id="HIC67311.1"
                     /translation="MSDTATRAAELLKDHRASIDRLDAILVYTLAERFKHTQSVGRLK
                     ARHDLPPSDPDREAAQIERLERLAREADLDPEFARKFLNFVIAEVIRHHETLQS"
     gene            complement(627..1175)
                     /locus_tag="EYO87_15200"
     CDS             complement(627..1175)
                     /locus_tag="EYO87_15200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_354136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HIC67312.1"
                     /translation="MIRLSPAPTLRTERLVLRAPVAADWPFWRDFAASDRSRFIRPAD
                     FDDGKAWRAFGHVIGHWVMRGWGSFIFTRQDDDSPLGMTGPWYPETWPEPEIGWTLWS
                     REAEGKGFACEAATAARDHAFGSLGWKTAVSYIDPQNARSIALAERLGATLDKTARGP
                     DFDTPCLVYRHPCPSPREGHAA"
     gene            complement(1172..>2562)
                     /locus_tag="EYO87_15205"
     CDS             complement(1172..>2562)
                     /locus_tag="EYO87_15205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018000117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HIC67313.1"
                     /translation="ALLEADVSLPVARSFVKSITAKATGSAVTKSVTPGQQVVKIVHD
                     ELIRVLQGEDAPEALRIDNPPAPILMVGLQGSGKTTTTAKLAKRLKDREKKRVLMASL
                     DTNRPAAMEQLAILGQQIGVDTLPIVPGQTAVQIAQRAKQQASLGGYDVYMLDTAGRL
                     HIDQVLMDEVQAVRDIAAPRETLLVVDGLTGQDAVNVATEFDGKVGVSGVVLTRMDGD
                     GRGGAALSMRAVTGKPIRFVGLGEKMDALEAFDAQRIAGRILGMGDIVALVEKAQEVL
                     EVEQAERMMKRFQKGLFNMNDLKGQLEQMQKMGGMQSIMGMMPGMQKMARQAEAAGMD
                     DTAMRRQVALINSMTKKERANPALLQASRKKRIAAGAGLDVAELNRLLKMQRQMADTM
                     KKIGKMGKGGMLKQAMRAMTGKGGGLPEMGDVDPARMAEATKLLQDPKGLGGDLSKAG
                     LPGGFGGMFGKK"
BASE COUNT          376 a          861 c          821 g          504 t
ORIGIN      
        1 cggctcggcc tttttcatgt tcttgcggtc ggccttgtcg cgaacgccgg ccgattccag
       61 aaaacgggcc acacgatcgg tcggctgggc gccatgatcc agccagtgct gaacgcgctc
      121 catgtccatc ttcacgcgat cctcgctgtc tttcggcagc agcgggttat aggtgcccag
      181 cttttccaga aagcggccgt cgcgcggctt gcgcgtatcg gcgacgacga tggcgtagtg
      241 ggggcgcttc ttggaaccac cacgggcgag acggatcttg acggccattc gagtttctcc
      301 tttgaaatgg ctggtttcgc tgcgtttcgc agcctaggat tgaagggttt cgtggtgccg
      361 gatcacttcg gcgatcacga agttcaggaa tttgcgcgcg aattccgggt ccagatcggc
      421 ttcgcgcgcg aggcgttcca gccgctcgat ctgggccgcc tcacggtcgg gatcggacgg
      481 aggaaggtcg tgccgggcct tgaggcggcc gacggactgg gtgtgcttga acctttcggc
      541 cagcgtatag acaaggatcg cgtccagccg gtcgatgctg gcgcgatggt ccttcagcag
      601 ttccgccgca cgggttgcgg tatcactcat gcggcatgtc cttcacgagg ggacgggcag
      661 ggatggcgat agaccaggca cggcgtgtcg aaatccggcc cccgcgcggt cttgtccagc
      721 gtcgcgccca gtctttcggc cagcgcgatc gagcgtgcgt tctgcggatc gatataactg
      781 acggcggtct tccagccgag gctgccgaag gcgtggtcgc gggcggccgt ggcggcttcg
      841 caggcaaagc ccttgccctc ggcttcgcgc gaccagagtg tccagccgat ttccggttcg
      901 ggccatgttt cgggatacca gggaccggtc attcccagcg ggctgtcgtc atcctgacgg
      961 gtgaagatga acgatcccca gccgcgcatg acccagtggc cgatgacatg gccaaaggcc
     1021 cgccatgcct tgccatcgtc gaaatcggcc gggcggatga accgcgaccg gtcgctggcc
     1081 gcgaaatcgc gccagaacgg ccagtcggcg gccacgggcg cgcgcagcac cagccgttcg
     1141 gtcctcaggg tcggagcagg ggagagccgg atcatttctt gccgaacatg ccgccgaagc
     1201 cgccgggcag gccggccttg gacagatcgc cgcccagacc cttgggatcc tgcagcagct
     1261 tcgtcgcctc ggccatcctg gcgggatcga catcgcccat ctcgggcagg ccgccgccct
     1321 tgcccgtcat tgcgcgcatc gcctgtttca gcatcccgcc cttgcccatc ttgccgattt
     1381 tcttcatcgt atcggccatt tggcgctgca tcttcagaag acggttcagc tcggccacgt
     1441 ccagcccggc gccggccgcg atgcgcttct tgcgactggc ctgcaacagc gcgggattgg
     1501 cgcgttcctt cttggtcatg gaattgatca gcgccacctg acggcgcatt gcggtgtcgt
     1561 ccatgcccgc cgcctcggcc tgcctggcca tcttctgcat gccgggcatc atgcccatga
     1621 tcgactgcat cccgcccatc ttctgcatct gttcaagctg gcccttgagg tcgttcatgt
     1681 tgaacaggcc cttctggaac cgcttcatca tgcgttcggc ctgttcgacc tccagcacct
     1741 cctgcgcctt ctcgaccagc gccacgatgt cgcccatgcc gagaatgcgg ccggcgattc
     1801 gctgcgcgtc gaacgcctcg agcgcgtcca tcttttcgcc aaggccgacg aagcggatcg
     1861 gcttgccggt gacggcgcgc atcgacagcg ccgcgccgcc gcgtccatcg ccgtccatcc
     1921 gggtcagcac cacgcccgag acgccgacct tgccgtcgaa ttcggtcgcc acgttcaccg
     1981 cgtcctgacc ggtcaggcca tcgacgacca gcagggtttc gcgcggagcg gcgatgtcgc
     2041 ggacggcctg cacctcgtcc atcagcacct ggtcgatatg cagtcggccg gcggtgtcca
     2101 gcatgtagac gtcatagccg cccaggctgg cctgctgttt cgcgcgctgc gcgatctgca
     2161 ccgccgtctg gccgggcacg atcggcagcg tatcgacgcc gatctgctgg cccagaatcg
     2221 caagctgctc catcgcggcg gggcggttgg tgtcgaggct ggccatcagc acgcgcttct
     2281 tctcgcggtc cttcaggcgc ttggccagct ttgccgtggt cgtggtcttg cccgagcctt
     2341 gcagcccgac catcaggatc ggcgccggcg ggttgtcgat gcgcagcgcc tcgggcgcgt
     2401 cctcgccctg cagcaccctg atcaattcgt catggacgat cttgacgacc tgctggccgg
     2461 gcgtgacgga tttcgtcact gccgagccgg tcgccttggc ggtgatcgat ttcacgaagc
     2521 tgcgcgcgac cggcagcgag acgtcggctt ccagcagcgc ga
//
LOCUS       DTVW01001151            1068 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2392303, whole
            genome shotgun sequence.
ACCESSION   DTVW01001151 DTVW01000000
VERSION     DTVW01001151.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1068)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1068)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1068
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2392303"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            177..938
                     /locus_tag="EYO87_15210"
     CDS             177..938
                     /locus_tag="EYO87_15210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008027660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HIC67314.1"
                     /translation="MAMNIRQMEILEIARASGRVGVEELAERFDVTLQTIRRDLGELA
                     DHGMLDRIHGGAVMRSGVSNIGYAERRRMHEDAKAAIARACAARIPDNSSIIINLGTT
                     TEDVARELLGHRNLTVITNNMNVANILVGNDSCEIVVAGGALRRSDGGLVGDLTTEFM
                     AQFKPDYAIIGASALDADGDLLDFDMAEVRVSRAIAGLARKCFLVTDISKLERSAPVR
                     IISMSDLDTVFVDRPLPDALMRKCGEWQTAVVIAC"
BASE COUNT          200 a          331 c          345 g          192 t
ORIGIN      
        1 gatgccgccg ccgatgatga aaaggtcggt gatctccggc atgaggctcc tcccaaagcc
       61 gggtcaggtg atcacggctt cgtgcaaact gtcaacggga attttcgcgg atgcgcgatt
      121 tactttcgta ttgacaagaa gcgcacatca tctttccgta aacgaaagag ggggtcgtgg
      181 ccatgaacat tcgccagatg gagatcctgg agatcgctcg tgcgtccggc cgcgtcggcg
      241 tcgaggaact ggccgaacgt ttcgacgtga ccttgcagac cattcgccgc gatctgggcg
      301 aactggccga tcacgggatg ctggaccgga tccatggcgg cgcggtcatg cgcagcggcg
      361 tcagcaatat cggctatgcc gagcggcggc ggatgcacga ggatgcgaaa gccgccattg
      421 cccgggcctg cgcggcgcgg attcccgaca attcctcgat catcatcaat ctcggcacca
      481 cgaccgagga cgttgcccgc gaattgctgg gtcatcgcaa cctgaccgtc atcaccaaca
      541 acatgaacgt tgccaatatc ctcgtcggca acgacagttg cgaaatcgtg gtcgcgggcg
      601 gggcgctgcg gcgcagcgac ggggggctgg tcggcgatct gacaaccgaa ttcatggccc
      661 agttcaaacc cgactacgcc atcatcggcg cctcggcgct ggatgccgat ggcgatcttc
      721 tggatttcga catggccgag gtccgggtca gccgcgccat cgccgggctg gcccggaaat
      781 gttttctggt gaccgatatc agcaagctgg aacgatccgc gccggtgcga atcatctcga
      841 tgtccgatct tgacacggtc ttcgtggatc ggcccctgcc cgatgcgctg atgcggaaat
      901 gcggggaatg gcagacggcc gtggtgatcg cctgctagtc gcgatcggcc agcagccggc
      961 caagcgcctg caggtcccgc gcgccggcct ggtccagcaa cgtctccagc gcccggaaat
     1021 gccggatgac ggcgtgcccg gtctgggtca gcaccgcgcc gccgccgc
//
LOCUS       DTVW01001152            1207 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2393920, whole
            genome shotgun sequence.
ACCESSION   DTVW01001152 DTVW01000000
VERSION     DTVW01001152.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1207)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1207)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1207
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2393920"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..289)
                     /locus_tag="EYO87_15215"
     CDS             complement(<1..289)
                     /locus_tag="EYO87_15215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012643532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--glyoxylate aminotransferase family
                     protein"
                     /protein_id="HIC67315.1"
                     /translation="MPHLRPEIDPEGLEEFSVVFTDRSLNHMSQRFQQVMRDLSATLR
                     QVYGADQIAIVPGGGTYAMESVARQFGRDAHALILRNGWFSYRWSQIFEAGG"
     gene            437..1147
                     /locus_tag="EYO87_15220"
     CDS             437..1147
                     /locus_tag="EYO87_15220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011747715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 glutamine amidotransferase"
                     /protein_id="HIC67316.1"
                     /translation="MRIGILQCGQSPAQLKDELGDYPDMFVRLLDGRGFTFRTWHVEG
                     MEFPADVHEAEGWLLTGSRHGAYEDHDFIPPLEDFIRQAHSAGVPMVGICFGHQIIAQ
                     ALGGKVVKHPDGWAVGAQDYDFGGKPVTLNAWHQDQVVSRPEGAEVAGRSDFCRNAAL
                     IYGDRAFTVQAHPEFDDAFVQGLMDTRARGVVPQDLLDRAAARMGQARDASGIADRIE
                     AFFKQPRALARGDERGVA"
BASE COUNT          198 a          389 c          419 g          201 t
ORIGIN      
        1 acccccccgc ctcgaatatc tggctccagc gatagctgaa ccagccgttg cggaggatca
       61 gcgcatgagc atcgcggccg aactgacggg cgaccgattc catcgcatag gtgccgccgc
      121 cgggcacgat ggcgatttgg tccgcgccat agacctggcg cagggtcgcg gacaggtcgc
      181 gcatcacctg ctggaacctt tgcgacatgt ggttcagcga gcggtcggtg aaaacgaccg
      241 agaattcctc gagcccctcg gggtcgatct cggggcgcag atgaggcatg gcggttctcc
      301 ctgtggtgcg gcgccacact agatccggcc ggcgcgctgc gaaagaccgc caaagggctg
      361 gcgaccgccg cgcccccttg cggttccccc tgcgccgaga ctaggcttcc gccataggca
      421 acatcgcagg attttcatgc gtatcggcat acttcaatgc ggccagtcgc ccgcgcagtt
      481 gaaggacgaa ctgggcgatt atcccgacat gttcgtccgt ctgctggacg ggcgcggctt
      541 taccttccgg acctggcatg tcgaggggat ggagtttccc gcggacgttc acgaggccga
      601 aggctggctt ctgaccggct cgcgccacgg ggcctacgag gatcacgact tcattccacc
      661 gctggaggat ttcatccggc aggcccattc ggcgggcgtg ccgatggtcg gcatctgttt
      721 cggccaccag atcatcgcgc aggccctggg cggcaaggtc gtcaaacatc ccgacggctg
      781 ggccgtgggc gcgcaggatt acgatttcgg cggcaagccc gtgacactga acgcctggca
      841 tcaggatcag gtggtcagcc ggcccgaggg ggccgaggtc gccggccgca gcgatttctg
      901 ccggaacgcg gcgctgatct atggcgaccg cgccttcacc gtgcaggccc atcccgaatt
      961 cgacgacgct ttcgtgcagg gcctgatgga cacgcgcgcg aggggcgtgg ttccgcagga
     1021 tctgctggac cgcgccgccg cgcgcatggg gcaggcccgc gatgcatccg gcatcgccga
     1081 ccggatcgag gcgttcttca agcagccaag ggccctggcg cgcggcgatg agcggggggt
     1141 ggcatgagcg actggatcgg caaggtgccg caggccgcgc gcgactacat ggcgggtctg
     1201 cggctgg
//
LOCUS       DTVW01001153            1049 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2393928, whole
            genome shotgun sequence.
ACCESSION   DTVW01001153 DTVW01000000
VERSION     DTVW01001153.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1049)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1049)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1049
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2393928"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..358)
                     /locus_tag="EYO87_15225"
     CDS             complement(<1..358)
                     /locus_tag="EYO87_15225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="catalyzes the formation of histidinol phosphate and
                     2-oxoglutarate from glutamate and imidazole
                     acetol-phosphate; Derived by automated computational
                     analysis using gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HIC67317.1"
                     /translation="MRPKPFAPIPASLPATVPFIGPETLQRRRGAAFDARLGANENGF
                     GPSPAAIAAMRDEAARAWQYGDSTSHDLRHALADHHAVPAESVTVGEGIDGLLGNLAR
                     LMIDRGDVAAGVAPVLA"
     gene            complement(399..536)
                     /gene="cydX"
                     /locus_tag="EYO87_15230"
     CDS             complement(399..536)
                     /gene="cydX"
                     /locus_tag="EYO87_15230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009521531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome bd-I oxidase subunit CydX"
                     /protein_id="HIC67318.1"
                     /translation="MWYFAWILGLPLAAMFAVVNAMWLELQEDRALFEVRRNHDSVDE
                     D"
     gene            complement(548..>1049)
                     /gene="cydB"
                     /locus_tag="EYO87_15235"
     CDS             complement(548..>1049)
                     /gene="cydB"
                     /locus_tag="EYO87_15235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008032318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cytochrome d ubiquinol oxidase subunit II"
                     /protein_id="HIC67319.1"
                     /translation="AGYALAGLWLAFFIDGYALVNPPDPNGASNPLASTVSRSGSWLS
                     AYADRPWIAIAPAMGFLGTFMAMRALRSGGQYSPLGWSKMAIFGMISSVGLTMFPFLL
                     PSSTSPDSSLTIWDASSSHQTLFVMLVATVIFLPLILAYTAWVYRVLWGKVTEDDVSD
                     PERHSY"
BASE COUNT          198 a          345 c          357 g          149 t
ORIGIN      
        1 ccgcaaggac gggggctacc ccagcggcca catcgccccg gtcgatcatc aggcgggcga
       61 gattgcccag aagtccgtcg atcccctcgc ccaccgtcac gctttcggcc ggaacggcgt
      121 gatgatcggc cagcgcgtgc cgcagatcgt ggctggtcga atcgccgtat tgccaggccc
      181 gcgcggcctc gtcccgcatg gcggcgatgg cggcggggct ggggccgaag ccgttctcgt
      241 tcgcgcccag ccgggcatcg aaggcggcgc cgcgccgacg ctgcaacgtc tcggggccga
      301 tgaagggcac ggtcgcgggc agggatgcgg ggatcggggc gaagggcttg ggtctcatga
      361 ggccgagact tggcgcattc gccgcgatcc cgcaagtctc agtcttcgtc gacgctgtcg
      421 tggttgcggc ggacctcgaa aagggcgcgg tcctcttgca gttccagcca catcgcgttg
      481 acgacggcaa acatcgccgc cagcggcagg ccgaggatcc aggcgaaata ccacatgggc
      541 ggtttcctca atagctgtga cgttcggggt ccgagacgtc gtcttccgtc accttgcccc
      601 acaggacccg atagacccag gcggtatagg ccaggatcag cggcagaaag atcaccgtcg
      661 ccaccagcat cacgaacagg gtctgatgcg aggacgaggc atcccagatc gtcagcgacg
      721 aatcgggact ggtgctggag ggcagaagga acgggaacat cgtcagcccg accgaggaaa
      781 tcatcccgaa gatcgccatc ttggaccagc ccagcggcga atattgcccg cccgaacgca
      841 gcgcccgcat cgccatgaag gtgcccagaa aacccatcgc cggggcgatc gcgatccatg
      901 gacggtcggc ataggccgaa agccagcttc ccgaccggct gacggtcgag gccagcgggt
      961 tcgaggcgcc gttcgggtcc ggcgggttca ccagggcata gccgtcgatg aagaaggcca
     1021 gccacagccc ggccagcgca tagcccgcc
//
LOCUS       DTVW01001154            1505 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2394090, whole
            genome shotgun sequence.
ACCESSION   DTVW01001154 DTVW01000000
VERSION     DTVW01001154.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1505)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1505)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1505
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2394090"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..796)
                     /locus_tag="EYO87_15240"
     CDS             complement(<1..796)
                     /locus_tag="EYO87_15240"
                     /inference="COORDINATES: protein motif:HMM:PF00924.16"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel"
                     /protein_id="HIC67320.1"
                     /translation="MDQVSPDMINAAQGFWARIVLFFEIMLVPTRLYQLVAVAALLIV
                     SWLLARVASRFFTDWLRHQANWPKWRLRLGLLIDRRMTLIVFMILAWAVALVMREITW
                     PSRSQLIALAATIATAWVAIFFLARVIRNRFLRRIVSWAAWIWVTLYLLDLIQPAANF
                     LDTLAITIGDLRLSALVVLKALAVTGLMIAGARILSRLITGRLSRNEDISPTMRVLTA
                     KLLQVVLFSLAVIVGLKAVGFDLTGLAVFSGAVGVGLGFGLQKVVSN"
     gene            1059..>1505
                     /locus_tag="EYO87_15245"
     CDS             1059..>1505
                     /locus_tag="EYO87_15245"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008035642.1"
                     /note="dehydratase component, catalyzes the isomerization
                     between 2-isopropylmalate and 3-isopropylmalate; Derived
                     by automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase large subunit"
                     /protein_id="HIC67321.1"
                     /translation="MTEHAAAPRTLYDKIWDAHLVDRQEDGTCLLYIDRHLVHEVTSP
                     QAFEGLRMTGRSVRAPGRTIAVPDHNVPTTLDRENGIDNEESRIQVDALDRNAREFGV
                     IYYPVNDIRQGIVHIVGPEQGWTLPGMTVVCGDSHTATHGAFGALAH"
BASE COUNT          318 a          534 c          446 g          207 t
ORIGIN      
        1 ggttcgacac gaccttttgc agaccgaagc ccaggccgac gccgaccgcg ccggaaaaga
       61 ctgcgaggcc ggtcagatcg aagccgaccg ccttcagccc gacgatgacg gccagactga
      121 acagcaccac ctgcaaaagc ttggctgtca gcacccgcat cgtgggcgag atgtcctcgt
      181 tccgcgacaa ccgcccggtg atcaggcgcg acaggatccg cgccccggcg atcatcagcc
      241 cggtgaccgc cagcgccttc agcaccacca gcgccgacaa ccgcagatcg ccgatggtga
      301 tagcaagagt gtcgaggaaa ttcgccgccg gctggatcag gtccagcagg tacagcgtca
      361 cccagatcca cgcggcccag ctgacgatgc ggcgcagaaa gcgattgcgg atcacgcgcg
      421 ccagaaagaa gatcgcgacc caggccgtcg cgatggtcgc ggccagcgcg atcagctggc
      481 tgcgcgacgg ccaggtgatc tctcgcatca ccagcgccac ggcccaggcc aggatcatga
      541 acacgatcag cgtcatccgc cggtcgatca gaaggcccag ccgcaatcgc catttcggcc
      601 agtttgcctg gtggcgcaac cagtcggtga aaaacctcga cgcgacacgg gccagaagcc
      661 acgagacaat cagcagggcc gccaccgcga caagctgata gagccgtgtc gggaccagca
      721 tgatctcgaa gaacaggacg atcctcgccc agaaaccctg cgcggcgttg atcatgtcgg
      781 gactgacctg gtccatgcgc gatcctcctg cgctcgatta gaccgatgca cagacggtcc
      841 ggcaaggcct gcgatattgc gtcaacgccg caagcgtcct aaaagatcag ccatgcccgg
      901 gttcatctat ttcgacatcc acgaccgcgc gcgcctgccc tcgcgctttt tcggcgagac
      961 gctttgcgtg acggcccgac tgtgaccggc ggcggatccc ccgccgcagc cacgccatgt
     1021 cgcgccctga accgccccgt agccgaaagc ccaagccaat gaccgaacat gccgcagcac
     1081 cgcgcaccct ctatgacaag atctgggacg cccatctggt cgaccgtcag gaagacggca
     1141 cctgtctgct gtatatcgac cgacatctgg tccacgaggt gaccagcccg caggccttcg
     1201 aaggtctgcg catgacgggc cgcagcgtgc gcgcgcccgg acgcaccatc gccgtgcccg
     1261 atcacaacgt gcccacgacg ctggaccgcg aaaacggcat cgacaacgag gagagccgga
     1321 tccaggtcga cgcgctggac cggaatgcac gcgaattcgg cgtgatctac tacccggtca
     1381 acgacatccg ccagggaatc gtccatatcg tcggccccga acagggctgg accctgcccg
     1441 gcatgaccgt cgtctgcggc gacagccaca ccgccaccca tggcgccttc ggggcgctgg
     1501 cccac
//
LOCUS       DTVW01001155            1779 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2396327, whole
            genome shotgun sequence.
ACCESSION   DTVW01001155 DTVW01000000
VERSION     DTVW01001155.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1779)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1779)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1779
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2396327"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..764)
                     /locus_tag="EYO87_15250"
     CDS             complement(<1..764)
                     /locus_tag="EYO87_15250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010395471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="choline dehydrogenase"
                     /protein_id="HIC67322.1"
                     /translation="MQDFGDYDFIVIGAGSAGCVLANRLSANPRNRVLLLEAGGHDNR
                     FWVHVPMGYLHAMGNPGLDWCYRTEPEPGLNGRRLNYPRGRVLGGCSSINGMIYMRGQ
                     ATDYDRWRQAGNPGWGWDDVLPCFRRSERHYGPADDHHGDRGEMRVAQQRLRWPILEA
                     VAEAAQEMGLPACADFNRGDNEGVGYFPVTQRRGLRWNARKAFLDPVRGRPNLRIETD
                     AQVRRLTFAGRRAAGVIFTQGGRQRLARVRSEIVLAA"
     gene            949..1596
                     /locus_tag="EYO87_15255"
     CDS             949..1596
                     /locus_tag="EYO87_15255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012177627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25/general stress protein
                     Ctc"
                     /protein_id="HIC67323.1"
                     /translation="MAKEIPDLVAEARAGTGKGAARQARREGKVPGIVYGDHKEPVAV
                     AFEFNNLLTKLRAGRFMSTLWNLKVDGQDDVRVICRAVQKDIVKDLPIHIDFMRLRRT
                     SKVNLFIPVEFVGHENCPGLRKGGTLVTVRPEVELVVTAGDIPDHITVDLSGLEVGDG
                     IHIHDVTLPAGATPTIERNFAIANIAAPSALRSSDDADEKADEAESTEETAEAEE"
BASE COUNT          305 a          623 c          577 g          274 t
ORIGIN      
        1 gccgccagca cgatctcgga cctgacccgg gcaaggcgct gccggccgcc ctgggtgaag
       61 atcacgcccg ccgcgcggcg gcccgcgaag gtcaggcgcc gcacctgggc gtcggtctcg
      121 atccgcaggt tgggccggcc ccgcaccggg tccagaaacg ccttgcgtgc gttccatcgc
      181 aggccgcgcc tctgggtgac ggggaaataa cccacgcctt cgttgtcgcc acgattgaaa
      241 tccgcgcagg cgggcagccc catctcttgc gcggcctcgg ccacggcttc caggatcggc
      301 catcgcagcc gctgctgcgc gacccgcatc tcgccccggt cgccgtgatg gtcgtcggcg
      361 gggccgtagt gacgttcgct gcggcgaaaa cagggcaaca cgtcgtccca gccccagccg
      421 gggttgcccg cctgccgcca gcggtcgtaa tcggtggcct gcccgcgcat gtagatcatg
      481 ccgttgatcg aggaacagcc gcccagaacc cgaccgcgcg gatagttcag gcggcggccg
      541 ttcagtcccg gctcgggttc ggtccggtag caccagtcga gacccggatt gcccatcgca
      601 tgaagatagc ccatcggcac atggacccag aagcggttgt catgaccgcc cgcctccagc
      661 agcaggacgc ggtttcgcgg attggcggac aggcggttgg ccagcacgca gcccgcagat
      721 cccgcgccga tgacgatgaa atcgtagtcg ccgaaatcct gcatcccctc ctccttccgc
      781 cgcaacgcta gcggccggcc ggccagccgg caagcaaacc gcgaggcccg cgcgcgcagc
      841 ggcgattgcc cccttcacat cccggccggc ctgcgctata ggcccggctc tgtcgccatg
      901 cacccttgga ggatggcggc gtcaacaact gttacaggaa tggatatcat ggccaaagag
      961 atcccggatc tggtggccga ggcacgcgcg gggacaggca agggggccgc ccgccaagct
     1021 cgccgcgaag gcaaggtgcc cggcatcgtg tatggagacc acaaggaacc ggtcgccgtc
     1081 gcgttcgaat tcaacaatct gctgaccaag ctgcgtgccg gtcgcttcat gtccacgctg
     1141 tggaacctga aggtcgatgg tcaggacgac gtgcgcgtca tctgccgcgc cgtgcagaag
     1201 gacatcgtga aggatctgcc gatccatatc gacttcatgc gcctgcgccg cacctcgaag
     1261 gtgaacctgt tcatcccggt cgaattcgtc ggccacgaga actgccccgg cctgcgcaag
     1321 ggcggcacgc tggtgacggt gcgccccgag gtcgaactgg tcgtgaccgc gggtgatatc
     1381 cccgatcaca tcaccgtcga tctgtcgggt ctggaagtcg gtgacggcat ccatatccac
     1441 gatgtcacgc tgccggccgg cgcgacgccg acgatcgaac gcaacttcgc catcgccaac
     1501 atcgccgcgc cgtcagcgct gcgttccagc gatgatgcgg acgagaaagc cgacgaggcc
     1561 gaaagcaccg aagagactgc cgaagccgaa gaatgatcgc ccggcctctt gcggggcccg
     1621 gttgatgcag gggggcggtg ccgctggcgc cgcccttttc ttttcggcca tccgctgcta
     1681 gcagatgcgc cattccgccc gacccagagg tgcctcatgc agcccgttca catcatcggc
     1741 gccggcctgg ccggatccga ggccgcctgg caggcggcc
//
LOCUS       DTVW01001156            1056 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2400496, whole
            genome shotgun sequence.
ACCESSION   DTVW01001156 DTVW01000000
VERSION     DTVW01001156.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1056)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1056)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1056
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2400496"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(14..>1056)
                     /locus_tag="EYO87_15260"
     CDS             complement(14..>1056)
                     /locus_tag="EYO87_15260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009826919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SufD family Fe-S cluster assembly protein"
                     /protein_id="HIC67324.1"
                     /translation="VFVDGIFDADASDDLALDGIEIASLSQADGSGEHWAADLYGSLE
                     SAGQKPVARPFAALNTAAAKDGVLIRVTGRPSRPIHLIYRRRDEAADATWHHLVRVEA
                     GAEATLLETGMAGARTNGVIEADLARGARLHHVAARRVGHEAVGLSHIFARVAAEAQF
                     KSFTLSVNGTLMRHEGVIEFVGDDAVAHIAAAVLGDGKSGRFHHDDTIFITHGAERCE
                     SRQVFKKVLKNGAVGVFQGKILVRPGAQKTDGYQISQALLLDERSQFLAKPELEIYAD
                     DVVCSHGSTTGAIDEEAMFYLRSRGVPKDRAIVFLVLSFLADALQEVEDDGLRGQIND
                     RLEAWLTRHATQ"
BASE COUNT          190 a          380 c          309 g          177 t
ORIGIN      
        1 atgccgccgc gcctcattgc gtcgcgtgcc gggtcagcca cgcttccagc cgatcgttga
       61 tctggccgcg caacccgtca tcctcgacct cctgcaacgc atcggccaga aacgacagga
      121 ccagaaatac gatggcacga tccttcggca ccccgcgcga gcgcagatag aacatcgcct
      181 cctcgtcgat cgcaccggtc gtcgatccat gcgagcagac aacgtcgtcg gcatagattt
      241 caagctcggg cttggccagg aactgactgc gttcgtccag cagcagcgcc tggctgatct
      301 ggtatccatc ggtcttctgc gcgccgggcc tgaccagaat cttgccctgg aaaacgccca
      361 cggcgccgtt cttcagcacc ttcttgaaga cctggcggct ttcgcagcgc tcggccccgt
      421 gggtgatgaa gatggtgtcg tcatgatgga accggccgct tttgccatcg cccagaaccg
      481 ccgcggcgat atgggcgacc gcatcgtcac cgacgaactc gatcacgccc tcgtgccgca
      541 tcagcgttcc attgaccgac agggtaaagc tcttgaactg cgcctcggcc gccacgcggg
      601 caaagatatg tgacagaccc acggcctcgt gacccacgcg ccgggcggcg acatgatgca
      661 gccgcgcgcc ccgggccaga tcggcctcga tcacgccatt cgtgcgcgcg ccggccatgc
      721 cggtttccag cagcgtcgcc tcggcacccg cttcgacacg gacaaggtga tgccaggtcg
      781 cgtcggccgc ctcgtccctg cggcgataga tcagatggat cggacgtgac ggccttccgg
      841 tcacgcgaat cagcacgccg tctttcgccg ccgccgtatt cagcgccgca aagggacgcg
      901 cgacgggctt ctgcccggcc gattccaggc tgccatagag gtcggccgcc caatgctcgc
      961 ccgacccgtc agcctgcgac agcgacgcga tctcgatccc gtccagcgcc agatcgtccg
     1021 aggcatcggc gtcaaagatc ccgtccacga aaacga
//
LOCUS       DTVW01001157            3620 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2401116, whole
            genome shotgun sequence.
ACCESSION   DTVW01001157 DTVW01000000
VERSION     DTVW01001157.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3620)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3620)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3620
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2401116"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(71..1036)
                     /locus_tag="EYO87_15265"
     CDS             complement(71..1036)
                     /locus_tag="EYO87_15265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017140179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YVTN family beta-propeller repeat protein"
                     /protein_id="HIC67325.1"
                     /translation="MRYLPTLVLCLAAAPAMANRVFVTNEKSNDVTVLDSDTQEVIGT
                     YPVGNRPRGITISPDGTKLYVCASDDDLVRVFDPETMEELYTLPSGPDPELFVLHPSG
                     NPLYIANEDDNLVTVIDTQTRKVLAEIPVGVEPEGMGVSPDGRVVINTSETTNMAHFI
                     DTESFQIFANVLVDSRPRFAEYNRDGTKLYVSAEIGGTVSVIDPSTQQIIDKIGFEIP
                     GVLPEAIQPVGVRVTDDGSRVFVALGPANRVAVIDGKSDEVRDYLLVGQRVWQMAFTP
                     DQKYLFTTNGNSNDVSIIDVAREKVVKSIPVGQQPWGVVIAPGPH"
     gene            complement(1047..2237)
                     /locus_tag="EYO87_15270"
     CDS             complement(1047..2237)
                     /locus_tag="EYO87_15270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011746376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     substrate-binding protein"
                     /protein_id="HIC67326.1"
                     /translation="MIRAITGFLVAVVLLATPVWAQRAADPMLIRAAVLRVDAQTLRP
                     ISRLELPTADLGFAGARLAIEDNDTTGRFMGQDFEAQEVATGPDGANAALDSLIGAGI
                     AFIVVLADDQTTLALADRAGDRATILNARARGDALRGADCRANIIHVAPSHAMIADAL
                     AQFLMWKNWPRWFLVEGSHPADTDLADAYRRAASKFGAKIVETRVYEDTGGARRTDSG
                     HVQVQKQMPVFTQRAPAYDVMIAADDSDVFAPYLPYQTWDPRPVAGSAGLVPRTWHPA
                     MEAWGASQFQNRFEELAGRPMREVDYQTWLALRMIGEAATRTGSADPAVLRDFLLSDR
                     FEVAGFKGQKLTIRDWDQQLRQPILLTTGDLMASVSPQGQYLHQVSQLDTLGIDRPET
                     ECSF"
     gene            complement(2425..2958)
                     /locus_tag="EYO87_15275"
     CDS             complement(2425..2958)
                     /locus_tag="EYO87_15275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011908954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent catabolism-associated CXXCW motif
                     protein"
                     /protein_id="HIC67327.1"
                     /translation="MTRWAMALLLAFAASASAEVPEPEGYRGAPYGAPVPASLQGAEV
                     IDAARAIDLHDQGAAFIDVYPRTRKPQDLPEGTIWQEPRHDTIPGAIWLWDTGYERLS
                     PDEEARLRNGLASASGGDRSAPLVIFCRADCWMSWNAAKRAVAMGYDAVKWFPGGTDE
                     WQQASDADLVAAVPVTP"
     gene            complement(2955..>3620)
                     /locus_tag="EYO87_15280"
     CDS             complement(2955..>3620)
                     /locus_tag="EYO87_15280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinoprotein dehydrogenase-associated putative
                     ABC transporter substrate-binding protein"
                     /protein_id="HIC67328.1"
                     /translation="FENRLAEKFGEWLGKPVSYTWFPSGIGFITKTLRAGTCDVVMGY
                     AQGDELVQNTNHYYTSVFGIVTRKDSDLASVDRLTDPALKDRPLGVVAGSPPATIMAR
                     AGLAKNMHGADLFVDRRVKDPVGDLLQGVRDGTYDAAVLWGPLAGPRVKDDPDLQFTP
                     LLKETTGPKMAYRITMGVRQGEQEWKRELNSLIRRRQDEINQVLHEAGVPLVDDYGKE
                     LLP"
BASE COUNT          591 a         1192 c         1171 g          666 t
ORIGIN      
        1 cccaggccat caggatcgcc aacaggcggg tcggattcgg cttcattctc tgcctttcct
       61 tttctctggg ctaatgcggg ccgggcgcga tcaccacgcc ccagggctgc tgacccacgg
      121 gaatggactt gacgaccttt tccctggcca catcgatgat cgagacgtcg ttggagttgc
      181 cgttcgtggt gaacaggtat ttctggtccg gcgtgaaggc catctgccag acacgctggc
      241 cgaccagcag gtaatcccgc acctcgtcgg acttgccgtc gatcacggcc acgcggttgg
      301 cggggccaag cgccacgaag accctgctgc cgtcatcggt gacgcggacg ccgaccggct
      361 ggatcgcttc gggcagcaca ccgggaatct cgaatccgat cttgtcgatg atctgctggg
      421 tggacgggtc gatgacgctg accgtgccgc cgatctcggc gctgacataa agcttggttc
      481 cgtcgcgatt gtattcggca aagcgcgggc ggctgtccac cagcacattg gcaaagatct
      541 gaaagctttc ggtgtcgatg aaatgcgcca tgttggtggt ttcggaggtg ttgatcacca
      601 ccctcccgtc cgggctgacg cccatcccct cgggctcgac cccgaccggg atctcggcca
      661 gcaccttgcg ggtttgcgta tcgatcaccg tgaccaggtt gtcgtcctcg ttggcgatgt
      721 aaagcgggtt gcccgacggg tgcagaacga acagttccgg gtccggcccc gacggcagcg
      781 tatacaattc ctccatcgtc tcggggtcga agacccggac cagatcgtcg tccgaggcgc
      841 agacatacaa tttcgtgcca tcggggctga tggtgatgcc gcgcgggcgg ttgccgaccg
      901 gataggtgcc gatcacctcc tgcgtgtcgc tgtccagcac cgtgacgtcg ttgctttttt
      961 cgttggtgac aaacacgcgg ttggccatcg ccggggctgc ggccaggcac aggacgaggg
     1021 tcggaagata tcgcatggcg cctctttcag aacgaacatt cggtttcggg acggtcgatg
     1081 cccagggtat cgagctggct gacctggtga aggtattgac cctgcgggct gaccgaggcc
     1141 atcagatcgc cggtggtcag caggatcggc tggcgcagct gctgatccca gtcgcggatg
     1201 gtcagcttct gccccttgaa gccggcgacc tcgaagcggt cggacagcag gaagtcgcgc
     1261 agaaccgccg gatcggccga gccggtgcgc gtcgccgcct cgccgatcat gcgcagtgcc
     1321 agccatgtct ggtaatcgac ctcgcgcatg gggcggcctg ccagttcctc gaaccggttc
     1381 tggaactggc tcgcgcccca ggcctccatc gcgggatgcc aggttcgcgg caccagcccg
     1441 gcggatccgg cgacaggccg cggatcccag gtctgatagg gcagataggg ggcgaagaca
     1501 tccgaatcgt cggccgcgat catcacgtca taggccggcg cccgctgggt gaagaccggc
     1561 atctgctttt gcacctgcac atgcccggaa tcggtgcgcc ttgcaccgcc ggtatcttca
     1621 tagacacgag tttcgacgat ctttgcaccg aatttcgagg ccgcgcgccg gtaggcgtcg
     1681 gccagatcgg tatcggcggg atggctgccc tcgaccagga accagcgcgg ccagttcttc
     1741 cacatcagga actgcgccag ggcgtcggcg atcatcgcat ggctgggcgc gacatggatg
     1801 atgttcgccc ggcaatccgc gccgcgcagg gcgtcgccgc gcgcgcgggc gttcaaaatc
     1861 gtcgccctgt ctccggcccg gtcggccagt gccagcgtgg tctggtcgtc ggccagcacg
     1921 acgatgaagg caatgccggc gccgatcagg ctgtccagcg ccgcattcgc cccgtcgggg
     1981 ccggttgcga cctcttgggc ttcgaaatcc tgacccatga agcgaccggt cgtgtcatta
     2041 tcctcgatcg ccagccgcgc gcccgcaaaa cccaggtcgg ccgtcggcag ttccagccgc
     2101 gagatcgggc gcagcgtctg cgcatcgaca cgcagcacgg cggcgcggat cagcatcgga
     2161 tcggccgccc gctgcgccca caccggtgtc gccagcagca cgaccgcgac cagaaaaccc
     2221 gtgattgccc tgatcatgct ccgctctccc cggatcatcg tgggcgcagg gcagcgtttg
     2281 ggcaagcctg tttatcttcc cgccggcacc gggaacttat ggctaagcct ttggtcctat
     2341 gccttttgtc cgagggcgcg gcgtctgccg cccgcgccgt ccccgacgcc gccacgcgcg
     2401 ggatgatcga tcgtttcggc gtcgtcacgg cgtgacagga acggccgcga cgagatcggc
     2461 atccgaagcc tgttgccatt catcggttcc gcccgggaac catttcaccg cgtcatagcc
     2521 catggccacg gcgcgtttgg cggcattcca gctcatccag caatcggccc ggcagaagat
     2581 caccagcggc gcggatctgt cgccgcccga ggcgctggcc aggccgttcc tcagccgcgc
     2641 ttcctcgtcc ggggaaaggc gttcatagcc ggtatcccaa agccagatcg caccggggat
     2701 ggtgtcgtgg cgcggctcct gccaaatggt gccttcgggc agatcctggg gtttgcgggt
     2761 ccggggatag acgtcgatga aggccgcgcc ctggtcgtgc aggtcgatcg cgcgggcggc
     2821 atcgataacc tcggcgccct gaaggctggc gggaacgggt gccccatagg gggcgccgcg
     2881 atagccttcg ggttcgggaa cctcggcgct ggccgaagcg gcgaaagcca gcaacagcgc
     2941 catcgcccag cgtgtcatgg cagcagttcc ttgccgtaat cgtccaccag aggcacgccc
     3001 gcctcgtgca gcacctgatt gatctcgtcc tgacgacggc ggatcaggct gttcagttcg
     3061 cgcttccatt cctgttctcc ctgacgcacg cccatcgtga tccggtaggc catcttcggg
     3121 ccggtggttt ccttcagcaa cggggtgaat tgcagatcgg gatcgtcctt gacgcgcggc
     3181 ccggccagcg gcccccacag cacggcggcg tcataggtgc cgtcgcggac gccttgcagc
     3241 aggtcaccga ccggatcctt gaccctgcga tccacgaaca gatcggcgcc gtgcatgttc
     3301 ttggccagcc ccgcccgcgc catgatcgtg gcggggggcg agcccgcgac gacacccagc
     3361 ggccgatcct tcagtgccgg gtcggtcaga cgatcgaccg aggccagatc gctgtccttg
     3421 cgggtcacga tgccgaagac cgaggtgtag taatggttcg tgttctgcac cagctcatcg
     3481 ccctgcgcat agcccatcac cacgtcgcag gttccggcgc gcagcgtctt ggtgatgaag
     3541 ccgatgcccg agggaaacca ggtatagctt accggcttgc ccagccattc gccgaatttc
     3601 tcggccagcc ggttctcgaa
//
LOCUS       DTVW01001158            1650 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2403899, whole
            genome shotgun sequence.
ACCESSION   DTVW01001158 DTVW01000000
VERSION     DTVW01001158.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1650)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1650)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1650
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2403899"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..268
                     /locus_tag="EYO87_15285"
     CDS             <1..268
                     /locus_tag="EYO87_15285"
                     /inference="COORDINATES: protein motif:HMM:PF03466.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HIC67329.1"
                     /translation="EIDILPTMLAFVERGLGSTILPLVSVINQVREGRLIARPIVRRT
                     IDRTLVLMTPLNRPGSRLISNFAEFLTAEVHAMVAAGQWPGTTL"
BASE COUNT          348 a          541 c          550 g          211 t
ORIGIN      
        1 cgagatcgac atcctgccga ccatgctcgc cttcgtcgag cgcgggcttg gcagcaccat
       61 cctgccgctt gtgagcgtga tcaatcaggt gcgtgagggg cggctcatcg cgcggccaat
      121 tgtccggcgc acgattgacc ggaccctcgt gctgatgacg cctctgaacc gacccggctc
      181 gcgtctgatc agcaattttg cagagttcct gacagcggaa gtgcacgcca tggtggcagc
      241 cgggcaatgg ccgggcacaa cgctttgagc atccggcaat gccctctggg catgtcggca
      301 ggcggactta tgcccggggc gaatttcttg cggccctaaa tcgcaccgca gcacatcagg
      361 acggtaagga acagcgccca agtcaggaag atggccaggc aatagggccc attccagacg
      421 agcccgatcc tgctggtgct gcggcccatg atcgtggcgg cgatgaccaa cgtggtgatg
      481 aacggcgaca ggccgatcac cgccgtccag ccgccagtga tggcgagcgc gatcgcggtg
      541 ttgcttaggc ccgggaccgc cagctgcgcg gcgatcgacc caaagacaga ggctgagacg
      601 atcggattca cgccgcagag cgccatcacc accgtcagca ggctcagccc caatgtaaga
      661 gacagcggac ccagtcccag tgcgacgatg gccgcccgga gatcctgggt tggcagcaga
      721 gccagcagca gcaccggcag gaacccggct gccgcaaaga cgccaacctc ggctccaagg
      781 tcggaaagac gggcccatgt ggcgcgggtt gccgcgccga ccccggcgga cgcctgcccc
      841 atggcccggc gtccggcgga tgcggcccag agcagggcgt agacaggaac ggcacagatc
      901 agggcttgct gaaagctgag gggcgtcagc tcatgtgcgg cgaaaacgct caccccgagt
      961 gccagcacat gcgccacgag agtcaccgcg ccgcgccagc tgccaggcgg cgggctcgga
     1021 cggggcagac caagccgacg gaagcggcgc ccgtcaagcc ggtcgaggct ccagccgatg
     1081 gcgacgaaaa caaaggacat ggcaaagcca acggggccaa agtccatata ggacacgccc
     1141 ggcaacgcga tcaggatggc gtttgtcgca aagccgaagg gcgaccagag cgaaatcatc
     1201 gaaaagcccc ggatcaccgc cagtgtcatg cgccgcagcc gcgcctcacg cgcctctgcg
     1261 ggcagatggg ccgcggcttt ggtggtcatt gcgcgtttgg caagatcgag cagcagcgcg
     1321 aggccgccga aattgatcag cacgccgaaa agatgcccgc caagggtcat cgcaagatag
     1381 cggcgagacg tgggctggtt ggtgacatag gccccggcct gcagcacctc cggcgcgatc
     1441 gctgctgccg agcgcaaagt gcccagcatc gcgatcagcg cagacagaaa gaccatccgg
     1501 tccgcggcct gccacaggac ctcggcggca acgccttgcc ggagagccag cgcaaggaca
     1561 gcgaccgaca gcaggatcgg cacccaggtg ccggttctga actgacgcca tgccagaagc
     1621 aggaacagcg ccagcgccgc cgcgccgagc
//
LOCUS       DTVW01001159            1033 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2405206, whole
            genome shotgun sequence.
ACCESSION   DTVW01001159 DTVW01000000
VERSION     DTVW01001159.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1033)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1033)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1033
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2405206"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..492)
                     /locus_tag="EYO87_15290"
     CDS             complement(<1..492)
                     /locus_tag="EYO87_15290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018391544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF58 domain-containing protein"
                     /protein_id="HIC67330.1"
                     /translation="MDLREIRAYVAGDDPRRLDPAATARTGQPHVRSLHEDRDDTTLL
                     VADFRAPMLWGTGAALRSVRAARLLARAGWLAARRGGSVAVLSVSGAGLAEMPSATGE
                     AQMAAIARLLAHQHDRALAEPGAPGLTEALSHAARLAPAGGRVVLATLPGGWLQAEAA
                     LTGL"
     gene            complement(639..962)
                     /locus_tag="EYO87_15295"
                     /pseudo
     CDS             complement(639..962)
                     /locus_tag="EYO87_15295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018001436.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
BASE COUNT          148 a          416 c          352 g          117 t
ORIGIN      
        1 cagcccggtc agcgccgcct cggcctgcaa ccagccgccc ggcagagtcg ccagcaccac
       61 gcgcccgccg gcgggcgcca gccgggcggc atgggacagc gcttcggtca ggccgggcgc
      121 gcccggttcg gccagcgcgc gatcgtgctg atgcgccagc aatcgcgcga tcgcggccat
      181 ctgcgcctcg cccgtggcgg acggcatctc ggccagtccc gcacccgaga ccgacaggac
      241 cgcgaccgag ccgccgcgcc gcgccgcaag ccatccggcc cgcgccagca gccgcgcggc
      301 gcggaccgat cgcaaggccg cgccggtgcc ccacagcatc ggcgcgcgga aatcggcgac
      361 cagcagggtg gtgtcgtcgc gatcctcgtg caggctgcgc acatgcggct ggccggtgcg
      421 cgctgtcgcc gccgggtcca gccggcgcgg atcgtccccc gcgacatagg cgcggatctc
      481 gcgcagatcc atgccgctgc cgggcagtcg cgccgccacc gctccggtcc gccgggtggc
      541 aggacgctgt ctttcggggg ccgtcgcttc gtcgcgcagg gccagcagtt cggccgcttg
      601 cagccggatc cccgcgacat cgggcaagcc ggccggaact accacggtcg caccgcggct
      661 agcgcatcgg caacgaggga ccgcctgctt cgcccttcgc tgacagcctg ccacgcaggc
      721 accatccggt gcgacagtgc atctgcggcc agcgcctcgg catcctcggg caagccgtga
      781 tcgcggccat gcagccaggc acgcgcgcgc acccctgccg ccagcgccag cgaaccacgc
      841 ggcgataccg gatgttcaac ccattccgcc accgcgccgc cgggtcgcgt cgccatgacc
      901 agccggacga tgaaatcctt cagcgccgga gccagatgca cccgcgagac gcggtcacgc
      961 gcccgcgcca gatccttggc cgtgacgaca ttcggaacgt cagagggcgg cgccatgccc
     1021 tcggcctcga cca
//
LOCUS       DTVW01001160            1730 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2405338, whole
            genome shotgun sequence.
ACCESSION   DTVW01001160 DTVW01000000
VERSION     DTVW01001160.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1730)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1730)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1730
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2405338"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            348..1607
                     /locus_tag="EYO87_15300"
     CDS             348..1607
                     /locus_tag="EYO87_15300"
                     /inference="COORDINATES: protein motif:HMM:PF02515.15"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HIC67331.1"
                     /translation="MFQMLDGVRVVELGHILLAPYATQFLGDFGADVIKVEAPEGDYY
                     RRLGASRVPGMTAQWMAVNRNKRSIALDLKSPEGRAALLEMLSQADIVVHNMRVPAIE
                     RLGLGYDAVREVNPRIVYCAAIGFGQDGPYADLPAFDDLIQARSGLAEANGRNAGAPA
                     FVPMVAADKITGLALGQAMLAGLFRQRTTGEGCYIETPMFETMISVMLSQHFNGAAFR
                     PPEGGFGYARVMSPFRKPAQTSDGFIAHGIYKFDQWQRFLRAVGRDDVADGPMMTDAA
                     TAQRHFPELYELVVTHILPQRTTAEWQALFDALDIPNAPVMAMEDLPDDPHVRAVGLI
                     EDYDHPQQGPMRRVRSPYTMRGVEMGPDLPAPALGAQGTAILEEFGFSPERVAQLIKA
                     GVVVQPEQDSSVNDGLTGAVPRSGDQP"
BASE COUNT          312 a          551 c          542 g          325 t
ORIGIN      
        1 gaccacgatc agcatgatca ccgccagtgc gacacaggcc agcgccgcaa acccggtctc
       61 tagcacggcc agcccccgcg aaacggccaa caggccgcgc gcgccccccc ttttcttcgg
      121 cggttccatt gcggccaccc cccccctttt ttttggcgct atttcgggcc atttccatcg
      181 gcgatttcca cgccggaaac gagccgcctt agcctcattg tggcgccaaa cttagcaagg
      241 cccccttgca tgtcaacgct ccccgtgcaa aaaaactagc aatacagtct tttagtcttt
      301 tgtagcgtgc ggtcggtgca gccgatccgg tgccgggggg gggaatcatg tttcaaatgc
      361 tcgacggggt gcgcgtggta gagctgggcc atattctcct ggccccctac gccacccagt
      421 tcctgggcga tttcggcgct gatgtgatca aggtcgaagc gccggaaggc gactattatc
      481 ggcgcctcgg cgcctcgcgc gtgccgggta tgaccgctca gtggatggcg gtgaaccgga
      541 acaaacgcag cattgcgctt gatctcaaat cccccgaagg gcgtgcggcg ctgctggaga
      601 tgctgagtca ggcggacatc gtggttcaca atatgcgagt gcctgcgatc gagcggctgg
      661 gtcttggata tgacgccgtg cgggaggtca atccgcgcat cgtctactgc gccgcgatcg
      721 ggttcgggca ggacgggccc tatgccgact tgcccgcctt cgatgacctg attcaggccc
      781 ggtcgggtct ggccgaggcc aacgggcgca acgcaggtgc ccccgccttt gtgccgatgg
      841 tggccgccga caagatcacc gggctggcgc tgggtcaggc gatgctggcc ggcctgttcc
      901 ggcagcgcac caccggcgaa gggtgctaca tcgaaacgcc gatgttcgaa acgatgatat
      961 cggtgatgtt gagccagcat ttcaacgggg cggccttccg gcctccggaa ggcgggttcg
     1021 gctatgcgcg ggtcatgagt ccattccgca aaccagcgca aaccagcgac ggtttcatcg
     1081 cgcacgggat ctacaaattc gatcaatggc agcggtttct gcgtgctgtg ggtcgcgacg
     1141 acgtggccga cggccccatg atgaccgacg cggcgaccgc acagcggcat tttcccgaac
     1201 tctatgaact tgttgtaacg catatcctgc cgcagcggac caccgcagag tggcaggcgc
     1261 tgttcgatgc cctcgatatt cccaatgccc cagtgatggc gatggaggac ctgcccgacg
     1321 atccgcatgt ccgcgccgtt ggcctgatag aagattatga ccatccccag caggggccga
     1381 tgcgccgggt ccgaagccct tatacgatgc gcggcgtcga gatgggcccc gatcttccgg
     1441 cacctgccct tggcgcacag ggcacggcga tcctggaaga gttcggcttc tcaccggaaa
     1501 gggttgctca actgataaag gccggtgtcg ttgtgcaacc cgagcaggac tcgtcggtaa
     1561 acgacggtct gacaggagcg gtgcctcggt ccggcgacca gccttgagcg gcacccggac
     1621 caccggcgtc ggccactgtc cccgcccgga ggaaggctcg gccagggaac tgcttcggca
     1681 gcgtgacggc atccccttgt atctcaagct cgcaagcctg tttcgcgaaa
//
LOCUS       DTVW01001161            1701 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2409319, whole
            genome shotgun sequence.
ACCESSION   DTVW01001161 DTVW01000000
VERSION     DTVW01001161.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1701)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1701)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1701
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2409319"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..518
                     /locus_tag="EYO87_15305"
     CDS             <1..518
                     /locus_tag="EYO87_15305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009502871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MoxR family ATPase"
                     /protein_id="HIC67332.1"
                     /translation="TVLLIDEIDKADIEFPNDLLQELDRMEFHVYETGQTIRARHRPV
                     VVITSNNEKELPDAFLRRCFFHYIRFPDAATLEAIVAVHHPGLKPALLREALNQFFEL
                     REAPGLKKKPSTSELLDWLKLILAEDLTPADLKREPGEILPRLHGALLKNEQDVALFE
                     KLAFMARRQGR"
     gene            583..1038
                     /locus_tag="EYO87_15310"
     CDS             583..1038
                     /locus_tag="EYO87_15310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008235074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HIC67333.1"
                     /translation="MTSIDVRPLMAGDKTAWQQLYAGYHAFYQRPDLPQSFFDIAFGR
                     LLSGDDRDFRGLVAQTDGTLLGLVHYVFHPHLWQREGVCYLQDLFTDPAARGRGVGRA
                     LINAVYDAADQAGVPGVYWMTQEFNYAGRTLYDRVGTRTPFIKYSRPST"
     gene            complement(1092..>1701)
                     /locus_tag="EYO87_15315"
     CDS             complement(1092..>1701)
                     /locus_tag="EYO87_15315"
                     /inference="COORDINATES: protein motif:HMM:PF04402.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF541 domain-containing protein"
                     /protein_id="HIC67334.1"
                     /translation="VGAGANQISGIEFTREDGADAEDQARREAVRDARHKAEVLAEAA
                     GLELGPVLILRDSGAPSGPPRPMMRAAAAEADIPVQAGEVSMSAQVEMEFALRGPEAD
                     CGGMKGGGKGKGDRAGRDRGLPEGHPQVAPGDRVTSPPDPADGAAPADGAAPSQSGSP
                     AAGDMPAPMGTDTGAPAPDEPIAPMGGDRLPDDADESPTPAN"
BASE COUNT          265 a          570 c          570 g          296 t
ORIGIN      
        1 gcaccgtcct gctgatcgac gagatcgaca aggccgatat cgaatttccg aacgacctgt
       61 tgcaggaact ggaccggatg gagtttcacg tttacgagac cggtcagacc atccgcgccc
      121 ggcaccggcc cgttgtcgtg atcacctcga acaacgagaa agagcttccc gacgcctttc
      181 tgcggcgctg cttctttcac tatatccgct ttcccgatgc ggcgacgctg gaagccatcg
      241 tcgcggtgca tcatcccggc ctgaagccgg cgctgctgcg agaggcgctg aaccagttct
      301 tcgagttgcg cgaagcgccg gggctgaaga agaaaccgtc gaccagcgaa ttgctggact
      361 ggctgaagct gatcctggcc gaggatctga cgcccgcgga tctgaagcgc gagccgggcg
      421 agatactgcc tcggttgcac ggcgcgctgc tgaaaaacga acaggacgtg gcgctgtttg
      481 aaaagctggc cttcatggcg cggcgccagg gacgctgagc atccgcgaat cgttgccgcg
      541 cgcggcgatt tgcgggaaga atggcagcag ggagaaatgg caatgacctc gatcgacgtc
      601 cggccgctga tggcagggga caagacggcg tggcaacagc tctacgccgg ctatcacgcc
      661 ttctaccagc ggccggatct gccgcaatcc ttcttcgaca tcgctttcgg gcgcctgcta
      721 tcgggcgacg accgggattt tcgcggcctg gtggcgcaga cggacgggac gctgctgggg
      781 ctggtccact acgtcttcca tccgcatctg tggcaacggg aaggagtctg ctatttgcag
      841 gatctgttca ccgatccggc ggcgcgcggg cgcggtgtgg gccgggcgct gatcaatgcc
      901 gtctatgatg cggccgatca ggccggcgtg cccggcgtct actggatgac gcaagagttc
      961 aattacgcgg gccgcacgct ttatgatcgt gtcggcacgc gaacgccctt catcaaatac
     1021 agccggccat ccacctagca aagcccgcag gtccgcgcgc cgggcctttg ccggcggcgc
     1081 gggtccatgg gtcagttcgc cggggtcggg ctttcatccg cgtcgtccgg cagcctgtcc
     1141 ccgcccattg gggcaatggg ttcgtccggg gcgggcgcgc cggtatcggt gcccatcggc
     1201 gcaggcatgt cgcccgccgc gggcgacccg gattgcgaag gcgcagcgcc atcggccggc
     1261 gcggcgccat cggccggatc cggcgggctc gtgacccgat cgcccggtgc gacctgggga
     1321 tggccttcgg gcaagccccg atccctgccg gccctgtcac ccttgccctt gccgccgcct
     1381 ttcatgccgc cgcaatcggc ctctggtccc ctcagcgcga attccatctc gacctgggcg
     1441 gacatggaaa cctcgccggc ctgaaccggg atatcggcct cggcggcggc ggcccgcatc
     1501 atcgggcgcg gtgggcccga cggggcgccg ctgtcgcgca ggatcagcac cggccccagt
     1561 tccaggccgg ccgcctcggc caggacctcg gccttgtggc gggcgtccct gaccgcctcg
     1621 cggcgggcct gatcctcggc atcggcaccg tcttcgcggg tgaattcgat accgctgatc
     1681 tggttcgccc cggcgccgac a
//
LOCUS       DTVW01001162            1026 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_241229, whole
            genome shotgun sequence.
ACCESSION   DTVW01001162 DTVW01000000
VERSION     DTVW01001162.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1026)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1026)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1026
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_241229"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            120..920
                     /locus_tag="EYO87_15320"
     CDS             120..920
                     /locus_tag="EYO87_15320"
                     /EC_number="1.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_004141589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroline-5-carboxylate reductase"
                     /protein_id="HIC67335.1"
                     /translation="MTKILLIGCGNMGHALLSAWQAMPTPPQVSIVDPTEALRDRAAK
                     TGARTFASAAEVPRDLEPDLVILAVKPQVIGKVLPDYAHLDACFLSIAAGTTLASLQR
                     GLDDKAIIRCMPNTPAAIGKGVFGIFANARVTPAQNRMVRDVLEPCGIVLEVGSDEDI
                     DRITAISGSGPAYLFHFIEALAQAGRRIGLTDDVALAAARGTVFGAASLAEGADEDAG
                     QLRRNVTSPNGTTAAALEVLMGTDRMADLLTEAAEAAFGRAKALAATE"
BASE COUNT          185 a          336 c          336 g          169 t
ORIGIN      
        1 tcaactcttt tccagacttg cagaaatggc gcgccctgtc caagcccgcg catccgcttt
       61 gacgccggca agaatttcgg ccagcatcgc ggcggaaccg aaacgacgag ggccagaaga
      121 tgacaaagat cctgctgatc ggctgtggaa atatgggcca tgcgctgctg tctgcctggc
      181 aggccatgcc gaccccgccc caggtcagca tcgtcgatcc gaccgaggcg ttgcgcgacc
      241 gggcggcgaa aaccggcgcg cggacctttg cctcggcagc cgaggtgccg cgcgatctgg
      301 aacccgatct ggtcatcctt gcggtcaagc cgcaggtcat cggcaaggtc ttgcccgatt
      361 acgcgcatct cgacgcctgc tttctgtcga tcgccgcagg cacgacgctg gcgagcctgc
      421 agcgcggtct ggacgacaag gccatcatcc gctgcatgcc gaacacgccg gccgcgatcg
      481 gcaagggcgt gttcggcatc ttcgccaatg cgcgtgtcac cccggcccag aaccgcatgg
      541 ttcgcgacgt gctggaaccc tgcgggatcg tgctggaggt cggatccgat gaggatatcg
      601 accggatcac cgcgatttcg ggttcgggcc cggcctatct gtttcacttt atcgaggctc
      661 tggcccaggc ggggcgccgg atcggcctga ccgatgacgt ggcgctggcc gccgcgcgcg
      721 gcaccgtctt cggcgcggct tcgctggccg agggcgcgga cgaggatgca ggccagttgc
      781 gcaggaacgt caccagccca aacggcacca cggccgcggc attggaagtg ctgatgggca
      841 cggatcgcat ggccgacctt ctgaccgagg cggccgaggc cgcgttcggc cgcgcaaagg
      901 cccttgccgc cacagaatag cgcacagccg acgaaggcgg ggtaatctca tcgaaggatt
      961 gaaagtggtg cccggaggcg gattcgaacc accgacacgc ggattttcaa tccgctgctc
     1021 taccaa
//
LOCUS       DTVW01001163            1719 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2413750, whole
            genome shotgun sequence.
ACCESSION   DTVW01001163 DTVW01000000
VERSION     DTVW01001163.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1719)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1719)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1719
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2413750"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            269..562
                     /locus_tag="EYO87_15325"
     CDS             269..562
                     /locus_tag="EYO87_15325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020038368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HIC67336.1"
                     /translation="MCQIFAGQDPERYESETRSLRLNGQSTSIRLERAFWRILDDIAA
                     REGVSTPAFISKLHAEVLELHGEARNFTSLLRCACTIHLGEDQQLGQTAIAAE"
     gene            650..1045
                     /locus_tag="EYO87_15330"
     CDS             650..1045
                     /locus_tag="EYO87_15330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008883624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactoylglutathione lyase"
                     /protein_id="HIC67337.1"
                     /translation="MAKYIHSMIRVLDEERSVDFYRRCFGLEVADRLDFDDFTLVYLS
                     NGESETELELTVNKGRTEAYDLGDGYGHVAFSVEDVDALHARLQAEGFAPRKLVDFAP
                     GNEVIARFFFVADPDGYQIEVLKRAGRFR"
     gene            1102..1623
                     /locus_tag="EYO87_15335"
     CDS             1102..1623
                     /locus_tag="EYO87_15335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Twin-arginine translocation pathway signal"
                     /protein_id="HIC67338.1"
                     /translation="MSQLSKHGLTRRALLSRAAAAGTLAVAGAGFIAAPDAAWAVEVG
                     KISEHEMATLLQMARDIYPHDRIGDRFYAIAVKSHDSDDQKQMVAEGVAALDAAAKEA
                     GFDDYLSAGWEADRVAILKTIEDTPFFQTVRGGLVTGLYNQKEIWPIFGYEGESYSQG
                     GYINRGFDDIDWL"
BASE COUNT          318 a          511 c          579 g          311 t
ORIGIN      
        1 atcgagtgat cgcgcaactg cgcgcccgcg cagcaagcca acatgaaagg cccgccccgg
       61 aaagggcggg ccttttgcct gatttcctgg cgcggtcttg caggggtgat cgtgaggacc
      121 ggttcttcct tgtccgccag atcggcagtc tcagcctgag gaccgcgacc tttgccgatc
      181 atcgcgtgat ccccgcgatc gcatcttgtt gacgtgatcg cgcttccggc gcaaactcgg
      241 tttcccatca ccagccggga tcaagccgat gtgccagatc ttcgcggggc aggaccccga
      301 acgctatgaa tccgagaccc gcagcctgcg gttgaacggg caatccacct cgatccgcct
      361 ggaacgggcc ttctggcgga tcctcgacga catcgccgcg cgtgaggggg tgagcacgcc
      421 ggctttcatt tccaagcttc acgccgaggt tctggaactg catggcgagg cccggaactt
      481 tacctctttg ctgcgctgcg cctgcaccat ccacctgggc gaggatcagc agctgggtca
      541 gaccgccatc gcggccgaat aaatacgtcc gtagtaaccc gttactaccc acgcccgcgt
      601 tccgccttct agtcttgtcc catgatggac gaactgggga gaggccggca tggcgaaata
      661 tatccattcg atgatccggg ttctggacga ggaacgctcg gtcgatttct accggcgctg
      721 cttcgggctg gaggtcgcgg accggctgga tttcgacgat ttcacgctgg tctacctgtc
      781 gaacggcgaa agcgaaacgg aactggaact gaccgtcaac aagggccgga ccgaggccta
      841 cgacctgggc gacggctatg gccatgtggc cttctcggtc gaggatgtgg acgcgctgca
      901 cgcgcggctg caggccgagg ggttcgcgcc gcgcaagctg gtcgatttcg cgcccggcaa
      961 cgaggtgatc gcacggttct tctttgtcgc ggatccggat ggctatcaga tcgaggttct
     1021 gaagcgggct ggccgcttca ggtgattgaa cgggcggccg gaggagggcc gccgcaggag
     1081 gaaagtgagg gaggaggaat catgtctcaa ctcagcaagc acgggctgac ccggcgggcg
     1141 ctgttgtcgc gggcggcggc ggccggcacg ctggcggtgg cgggcgcggg tttcatcgcc
     1201 gcgcccgacg ccgcctgggc ggtcgaggtc ggcaagatca gcgaacacga gatggccacg
     1261 ctgttgcaga tggcgcgcga catctatccg catgacagga tcggcgatcg attctacgcc
     1321 atcgccgtca agtcccatga cagcgacgat cagaaacaga tggtcgccga aggcgtcgcc
     1381 gcgctggacg ccgcggcgaa agaggccggt ttcgacgatt atctttcggc aggatgggaa
     1441 gcggaccggg tcgcgatcct gaagaccatc gaggatacgc ccttcttcca gaccgtgcgc
     1501 ggggggttgg tgaccgggtt gtataaccag aaagagatct ggccgatctt cggctacgag
     1561 ggcgaatcct attcccaggg cggctatatc aaccgcggct tcgacgacat cgactggctg
     1621 tgaggggaga gacaatcatg gcagaagcag cgaaattcga tctgaacgac gacggcgtcg
     1681 tggtcatcgt cggcaccggc gccggcggcg gggtgctgg
//
LOCUS       DTVW01001164            1337 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2414671, whole
            genome shotgun sequence.
ACCESSION   DTVW01001164 DTVW01000000
VERSION     DTVW01001164.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1337)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1337)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1337
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2414671"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..519
                     /gene="gltA"
                     /locus_tag="EYO87_15340"
     CDS             <1..519
                     /gene="gltA"
                     /locus_tag="EYO87_15340"
                     /EC_number="2.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352045.1"
                     /note="type II enzyme; in Escherichia coli this enzyme
                     forms a trimer of dimers which is allosterically inhibited
                     by NADH and competitively inhibited by
                     alpha-ketoglutarate; allosteric inhibition is lost when
                     Cys206 is chemically modified which also affects hexamer
                     formation; forms oxaloacetate and acetyl-CoA and water
                     from citrate and coenzyme A; functions in TCA cycle,
                     glyoxylate cycle and respiration; enzyme from Helicobacter
                     pylori is not inhibited by NADH; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate (Si)-synthase"
                     /protein_id="HIC67339.1"
                     /translation="ACLWGPAHGGANQACLEMLKQIGTVDKIPEYIARAKDKDDPFRL
                     MGFGHRVYKNFDPRATVMKESADEVLDLLGIQNNPTLQVAKELEKIALEDEYFVSKKL
                     YPNVDFYSGIILSAMGFPTSMFTPIFALSRTVGWIAQWKEMISDPQNKIGRPRQLYVG
                     ADRRDYVGLDDR"
     gene            584..958
                     /locus_tag="EYO87_15345"
     CDS             584..958
                     /locus_tag="EYO87_15345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011749951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1284 domain-containing protein"
                     /protein_id="HIC67340.1"
                     /translation="MLCAIGWQGKGYSPDFTRNMDRIVVQRLRADPATEVVFTQGADA
                     ICGPCPSRRGTGCRMQTRIDGLDRRHAEALGIAPGQRMPWSEAQRRASELLPADLDRI
                     CAGCRWLDLGLCKAALAALRRG"
BASE COUNT          222 a          444 c          448 g          223 t
ORIGIN      
        1 gcctgcctgt gggggcccgc ccatggcggc gcgaaccagg cctgcctgga aatgctgaaa
       61 cagatcggca ccgtggacaa gatccccgaa tacattgccc gcgccaagga caaggacgat
      121 ccgttccgcc tgatgggctt tggccatcgg gtctacaaga acttcgaccc ccgcgcgacg
      181 gtgatgaagg aatcggcgga cgaggttctg gaccttctgg gcatccagaa caatccgacc
      241 cttcaggtcg ccaaggaact ggagaagatc gcgctggagg acgaatactt cgtctcgaag
      301 aagctgtatc cgaacgtcga tttctattcg ggcatcatcc tgtccgcgat gggctttccc
      361 acctcgatgt tcacgccgat cttcgcgctg tcgcggaccg tcggctggat cgcccaatgg
      421 aaagagatga tcagcgatcc gcagaacaag atcggtcggc cgcgccagct ttatgtcggt
      481 gcggaccggc gggactacgt cggtcttgac gaccgctgag ccctgccagg acaacgaacg
      541 gccccggagc ggatccgggg ccgtttcgct gcgcccgcat catgtgctgt gcgcgatcgg
      601 ctggcagggc aagggctatt cgccggattt cacgcggaac atggaccgca tcgtggtgca
      661 gcgacttcgt gccgatcccg cgaccgaggt cgtcttcacc cagggcgcgg atgcgatctg
      721 cggaccctgt ccctcgcgcc gcgggaccgg ttgccggatg cagaccagga tcgacgggct
      781 ggaccggcgc cacgcagaag ccctgggcat cgcgccgggt cagcgtatgc cctggtccga
      841 ggcgcagcgc cgcgcatcgg aactgctgcc cgctgatctg gaccggatct gcgccggttg
      901 ccgctggctg gaccttggcc tgtgcaaggc ggcgctggcg gccttgcggc gcggatgaca
      961 gccaaagccg ccgcgcggcc gcgacgtggc tggatcggtg accgggcgct tgcgacttcc
     1021 aggcgattac cacccattcg cggccggtgc acacatggcc gcgtcgcagc ccctcgaccg
     1081 agccggaata acgaaacccc gcctgaatgg cggggcttgt cagcaatcgc ccgcgggccg
     1141 ggacgcgatg tcaattgccg ccgaggatgc cgttcagggc gcggctgaga gcgtcgtctg
     1201 aattggccga ggtcgagctg cccggcgttt gtggcgcgct gccgcccacc tcggtcgggg
     1261 ccgcgccaat gattcggccg cgctgctggc tactgccctc gacgctgttc atcacgcccg
     1321 ccagcgccgc cgccagc
//
LOCUS       DTVW01001165            1358 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2417685, whole
            genome shotgun sequence.
ACCESSION   DTVW01001165 DTVW01000000
VERSION     DTVW01001165.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1358)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1358)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1358
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2417685"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..185)
                     /locus_tag="EYO87_15350"
     CDS             complement(<1..185)
                     /locus_tag="EYO87_15350"
                     /EC_number="2.3.1.9"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Catalyzes the synthesis of acetoacetyl coenzyme A
                     from two molecules of acetyl coenzyme A. It can also act
                     as a thiolase, catalyzing the reverse reaction and
                     generating two-carbon units from the four-carbon product
                     of fatty acid oxidation; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acetyltransferase"
                     /protein_id="HIC67341.1"
                     /translation="MTMRDIFVLGCARTPMGGLQGALAESSAPELGGVAIRAALNRAD
                     RAAGDPDALFMGCVLPAG"
     gene            275..604
                     /locus_tag="EYO87_15355"
     CDS             275..604
                     /locus_tag="EYO87_15355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013963700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-sigma factor antagonist"
                     /protein_id="HIC67342.1"
                     /translation="MLDAVDHGGEMRVRVTGSRIDAAIATRFKDKLREIALRNRKPVV
                     MDMSAVDFMDSSGLGAVIAVRKAMPENLPLILQGLTPNVERVFRLTRMDSVFEIRPAA
                     TEGPETT"
     gene            601..1095
                     /locus_tag="EYO87_15360"
     CDS             601..1095
                     /locus_tag="EYO87_15360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011747159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HIC67343.1"
                     /translation="MTPTQRQNAEVKGGGRVRTQPMFHQVLSARPDSVRGALMDVRRR
                     FAGEVSDDTLGRLELVLAEVMNNVAEHAATEAGGTVRRTLPQIHLCIVRHESGLACAI
                     TDNGISVPADCLLPRDLPRNDVADLPEGGFGWYLIQDLTQALCYYREQQRNFLAFSVP
                     FAEV"
     gene            complement(1164..>1358)
                     /gene="hspQ"
                     /locus_tag="EYO87_15365"
     CDS             complement(1164..>1358)
                     /gene="hspQ"
                     /locus_tag="EYO87_15365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009158392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heat shock protein HspQ"
                     /protein_id="HIC67344.1"
                     /translation="DARPAKNQPFYHLYAETEATYYVAYVSEQNLEADASGEPLDHPD
                     VMEMFSDFADGSYRLAAQLN"
BASE COUNT          252 a          419 c          443 g          244 t
ORIGIN      
        1 ccggcgggca gcacgcagcc catgaacagc gcatcgggat cgccggccgc gcggtccgcc
       61 cggttcagcg ccgcgcgaat ggcgacgccg cccagttcgg gggcgctgga ctcggccagc
      121 gcgccttgca gacctcccat gggcgtgcgc gcgcatccca gaacgaaaat gtctcgcatt
      181 gtcacgatct ctcccggctc gacctgttcc cgcttaccgg atcgtaacca tttgcgtcta
      241 gtcgtgagag ggaaaacaag agggaatcgg gatcatgctg gacgctgtcg accatggtgg
      301 ggaaatgagg gtcagggtca ccggcagtcg catcgacgcc gcgatcgcca ccaggttcaa
      361 ggacaagctg cgcgagatcg cgctgcgcaa ccgcaagccg gttgtaatgg atatgagtgc
      421 cgttgatttc atggacagtt cgggccttgg tgccgtaatc gcggtgcgca aggcgatgcc
      481 cgaaaacctg ccgctgatcc ttcaggggct gacgcccaat gtcgaacggg tgttccgtct
      541 gacacggatg gattcggttt tcgagatccg gccggccgcc acggagggac cggagaccac
      601 atgaccccga cccagcggca gaacgccgaa gtgaaaggag ggggccgggt gcggacacaa
      661 ccgatgtttc atcaggtgct gtccgcccgc cccgacagcg tgcgcggcgc gttgatggat
      721 gtgcgccgcc gcttcgccgg cgaggtcagc gatgatacgc tgggccggct ggaactggtt
      781 ctggccgagg tgatgaacaa tgtcgccgaa catgctgcga cagaggccgg gggaacggtt
      841 cgcagaacct tgccgcagat ccatctctgc atcgtccggc acgaatccgg gctggcctgc
      901 gcgatcaccg ataacggcat ctccgttccc gccgattgcc tgctgccgcg cgacctgccg
      961 cgaaacgatg tcgccgatct gcccgagggc ggcttcggct ggtatctgat ccaggatctg
     1021 acacaggctc tttgctatta ccgcgaacag cagcgaaatt tcctggcctt cagcgtgccc
     1081 tttgccgagg tttgagccat tgccggaccg gccgcggaat gcgcgatcgt gatcgccagc
     1141 gctgcagaag gcgccctgcg gcctcagttc agttgcgcgg caaggcgata gctgccatca
     1201 gcgaaatcgc tgaacatctc catcacatcg ggatggtcca gcggctcgcc agaggcatcg
     1261 gcctctaggt tctgctcgga cacataggca acgtaatagg ttgcctcggt ttcggcataa
     1321 aggtgataga agggctggtt cttggccggc cgcgcatc
//
LOCUS       DTVW01001166            3119 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2419261, whole
            genome shotgun sequence.
ACCESSION   DTVW01001166 DTVW01000000
VERSION     DTVW01001166.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3119)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3119)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3119
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2419261"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..685
                     /locus_tag="EYO87_15370"
     CDS             <1..685
                     /locus_tag="EYO87_15370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HIC67345.1"
                     /translation="SPPSWPAGDDPRPPRLGDLVMRILRLVPDLPRLRISSIDSIEAD
                     ENLMLAIATEPRLMPHLHLSLQAGDDMILKRMKRRHLRDDAIRFCQEARRLRPGMVFG
                     ADIIAGFPTETEAMFENSLRLVEECGLTFLHVFPYSARKGTPAARMPAVKGPVIRDRA
                     ARLRAVGEAALLRHLEAETGQMRRVLTEGPRLGRTEGFAEVAFTADQPEGALLDARIT
                     GHDGQRLVA"
     gene            815..1735
                     /locus_tag="EYO87_15375"
     CDS             815..1735
                     /locus_tag="EYO87_15375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020038841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histone deacetylase family protein"
                     /protein_id="HIC67346.1"
                     /translation="MTTALYLHPAAGDHVTPPGHPERAARTRAVMAALEELDLDRREA
                     PEADPADLLRCHPQTYLDRIEAALPAEGFRMLDADTQLSPGSLGAALRAAGGACAAVD
                     AVLADDVSHAFVAMRPPGHHAERETPMGFCLFGNVAIAARRALDHHGLQRVAVLDFDV
                     HHGNGTQDLLWDEPRAFFATSQQMPLWPGSGAASERGAHGQIMNVPLPPGSGGEIARP
                     AWDSILVRALEFAPQLVIVSAGFDAHRDDPLAGLVWDESDFTAITRAICKMAATAGAP
                     VVSCLEGGYDLAALARSVRAHVEVLMEAAG"
     gene            1732..1968
                     /locus_tag="EYO87_15380"
     CDS             1732..1968
                     /locus_tag="EYO87_15380"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_022706021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HIC67347.1"
                     /translation="MSEIETLSFEEAMRELEATVGKLETGEASLEESIALYERGASLR
                     AHCEKRLREAEERVEKITLSASGQPGGTEPVEGM"
     gene            1968..2831
                     /locus_tag="EYO87_15385"
     CDS             1968..2831
                     /locus_tag="EYO87_15385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HIC67348.1"
                     /translation="MLSRLDEVKAQVQTALDAALADLPAGELRDAMAYATVGGKRIRA
                     FLVMESARLHGVGDEAALPVAAAVEALHAYSLVHDDLPAMDDDDLRRGMPTCHVQWSE
                     ATAILAGDALQALAFGLLGADRIGNGDARLRLIAGLADAAGARGMVWGQALDIAAESA
                     VQPLNLKAIKRLQRAKTGALIRFSACAGPLIAAEDTTALDDYAGALGLAFQIVDDILD
                     VTGDEDVTGKRVGKDQAAGKATFPSLLGLQGARDEARRYVLKAEAALEPYGDAAGNLR
                     DLARFVIERDT"
     gene            2856..>3119
                     /locus_tag="EYO87_15390"
     CDS             2856..>3119
                     /locus_tag="EYO87_15390"
                     /EC_number="2.2.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_354219.1"
                     /note="catalyzes the formation of 1-deoxy-D-xylulose
                     5-phosphate from pyruvate and D-glyceraldehyde
                     3-phosphate; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase"
                     /protein_id="HIC67349.1"
                     /translation="MTDRPLTPILDRVVSPADMKTLSDRELRQLADELRSETIGAVSV
                     TGGHLGAGLGVVELTVALHAVFDSPRDKIIWDVGHQCYPHKILT"
BASE COUNT          465 a         1005 c         1140 g          509 t
ORIGIN      
        1 cagcccgccg agctggccgg ccggggatga cccccgcccg ccgcgtctgg gcgatctggt
       61 gatgcggatc ctgcggctgg tgccggacct gccgcgcctg cggatatcct cgatcgattc
      121 gatcgaggcg gacgagaacc tgatgctggc catcgcgacc gagccgcggc tgatgccgca
      181 cctgcacctg tcgctgcagg cgggcgacga catgatcctg aagcggatga agcgccgcca
      241 cctgcgcgat gacgcgatcc ggttctgcca ggaggcgcgg cggctgcggc ccggcatggt
      301 ctttggcgcc gacatcatcg cgggcttccc gaccgagacc gaggcgatgt tcgaaaactc
      361 gttgcgcctg gtcgaggaat gcggcctgac cttcctgcac gtctttccct attcggcgcg
      421 caagggcaca cccgcggcgc ggatgcccgc ggtgaagggc ccggtgatcc gcgaccgcgc
      481 ggcccggctg cgcgcggtgg gcgaggcggc cctgctgcgg catctggagg ccgagacggg
      541 acagatgcgt cgcgtgctga ccgaaggccc ccgcctgggc cggaccgagg gattcgccga
      601 ggtggccttt accgcggacc agcccgaggg ggccttgctg gatgcgcgga tcaccggcca
      661 tgacgggcag cggctggtgg cctgacgggc gacttggggc aaccgccggg gcgctgcccc
      721 ggaccccgag gtatttggaa agagtgcaag cggatcgccg gcttgaagct ttcggcgggt
      781 gggcctagcg tggcgcggtg atcgaggagg tgccatgacg accgcgctct atttacatcc
      841 ggccgccggg gaccatgtca ccccgcccgg ccatcccgag cgggcggcgc ggacccgagc
      901 ggtcatggcc gcgctggagg agctggatct ggaccgccgc gaggcacctg aggccgatcc
      961 cgccgatctt cttcgctgtc atccccagac ctacctggac cggatcgagg ccgccctgcc
     1021 cgccgagggg tttcggatgc tggacgccga cacgcaattg tcacccggca gcctgggcgc
     1081 tgccttgcgt gccgctggtg gcgcctgcgc ggcggtcgat gcggtgctgg ccgatgacgt
     1141 aagccatgcc ttcgtggcga tgcgcccgcc cggacaccat gccgagcgtg agacgccgat
     1201 gggcttctgc ctgttcggga atgtggccat tgctgccagg cgggcgctgg atcaccacgg
     1261 tttgcagcgt gtcgcggttc tggatttcga cgtgcaccac ggcaacggca cgcaggatct
     1321 gctatgggac gagccgcgcg ccttttttgc gaccagccag cagatgccat tgtggccggg
     1381 cagcggggcc gcctcggaac gcggcgcgca tgggcagatc atgaacgtgc ctctgccgcc
     1441 cggctctggc ggcgagatcg cccgtcctgc ctgggattcg atcctggtcc gcgcgctgga
     1501 gttcgccccg caactggtca tcgtctcggc cgggttcgat gcccatcgcg acgatcctct
     1561 ggccgggctg gtctgggacg agagcgattt taccgcgatc acgcgcgcga tctgcaagat
     1621 ggccgcgacc gccggcgccc cggtggtatc ctgcctggaa ggcggctatg atctggcggc
     1681 tttggcgcgt tcggttcgcg cccatgtcga ggtgctgatg gaggccgcag gatgagcgag
     1741 atcgagacgc tgagcttcga ggaggcgatg cgcgaactgg aggccaccgt cggcaagctg
     1801 gagacgggtg aggcctcgct ggaggaatcg atcgcgctgt atgaacgcgg ggcgagcctg
     1861 cgcgcgcatt gcgaaaagcg tctgcgcgag gccgaggaac gggtcgagaa gatcactctg
     1921 tccgccagtg gccagcccgg tggcacggaa cccgtcgagg gcatgtgatg ctgtccagac
     1981 tggacgaggt caaggcgcag gttcagaccg cgctggatgc cgcgctggcc gatctgcccg
     2041 ccggcgaatt gcgcgacgcg atggcctatg cgaccgtggg cggcaagcgg atccgcgcct
     2101 ttctggtcat ggaatcggcg cggctgcacg gcgtcggtga cgaggccgcg ctgccggtcg
     2161 cggcggcggt cgaagcgctg cacgcctatt cgctggtcca tgacgacctg cccgcgatgg
     2221 atgatgacga cctgcgccgg gggatgccca cctgccatgt gcaatggtcc gaggcgacgg
     2281 cgatccttgc aggcgacgcc ttgcaggcgc tggctttcgg cctgctgggc gctgaccgta
     2341 tcgggaatgg cgatgcccgg ctgcggctga tcgcggggct ggccgatgcg gccggcgcgc
     2401 gcggcatggt ctggggacag gccctggaca tcgctgccga aagcgccgtc cagccgctga
     2461 atctgaaggc gatcaagcgg ttgcagcggg ccaagaccgg tgccttgatc cggttttcgg
     2521 cctgcgccgg accgctgatc gcggccgagg acacgaccgc gctggacgat tatgccggcg
     2581 ccctcgggct ggccttccag atcgtcgatg acattctcga tgtgacgggt gacgaggatg
     2641 tgaccggcaa gcgggttggc aaggatcagg cggcgggaaa agccaccttc ccgtcgctgc
     2701 tgggcctgca gggcgccagg gatgaggccc gccgctatgt cctgaaggcc gaggccgcgc
     2761 tggaacccta tggcgatgcg gccggaaact tgcgcgacct ggcgcgtttc gttatcgagc
     2821 gcgatacctg aagccgcccg cccggagggc ccgccatgac cgacagaccg ctgacgccga
     2881 tccttgaccg tgtcgtttcg cccgccgaca tgaagaccct gtcggatcgc gagttgaggc
     2941 aactggctga tgaattgcgg tccgaaacga tcggcgccgt cagcgtgacc ggcgggcatc
     3001 tgggcgcggg tctgggcgtc gtcgaactga cggtggcgct tcacgccgtc ttcgacagcc
     3061 cgcgcgacaa gatcatctgg gatgtggggc atcaatgcta tccccacaag atcctgacc
//
LOCUS       DTVW01001167            6784 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2420694, whole
            genome shotgun sequence.
ACCESSION   DTVW01001167 DTVW01000000
VERSION     DTVW01001167.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 6784)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6784)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6784
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2420694"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..727)
                     /locus_tag="EYO87_15395"
     CDS             complement(<1..727)
                     /locus_tag="EYO87_15395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011751296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family transcriptional regulator"
                     /protein_id="HIC67350.1"
                     /translation="MNRKKVTLAEVARVAGVSRATVSLVVRKSPLVADHTREKVEKVM
                     ADLDYVRDIGAARLRNNSSRTVGVIVPNLVNSFFTEFLSGVEQVMGEDDRVVLLANSQ
                     DDPVRQNDILQRFRGHGVDGVILCPAEGTDPDLPLRLRHRGVPVVQALREVGEGITDY
                     AGADYLEGVRLAIRHLVGGGHHRIAFLSVAAQTSAREERLRGFAAALGETGASSAGIV
                     EAELTWEGAAQSAAAMLALKTRPT"
     gene            1320..2300
                     /locus_tag="EYO87_15400"
     CDS             1320..2300
                     /locus_tag="EYO87_15400"
                     /inference="COORDINATES: protein motif:HMM:PF02397.14"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar transferase"
                     /protein_id="HIC67351.1"
                     /translation="MSSVIGFRDTWPFGYRLYNVAVATLLLVALSPTILLLAFLLLIT
                     QGPNILYFGPRMGKNQRPFQIIKFRTLCPKRARAITADRTLPADANIETRLGKILREV
                     RLDELPQLVNIIRGDMNICGPRPVRPEIAAIESRRIKGYEKRFDVRPGLIGPTQACFG
                     HGASKRIRARMNNLAVNRPVNIAAELSLLVRIGSSILHRIGKKSVKFAKRFSTGKTSA
                     FKDIYLSDIVQNKPSLVHRIDMSSLSVRGVDLPSDGHLAIRLHSGALRRARVKLTQSG
                     APGIFNYKPVNEVDAFVIERYALGRVIIPPRVAWSIESRQPELAGQEAGI"
     gene            2306..3838
                     /locus_tag="EYO87_15405"
     CDS             2306..3838
                     /locus_tag="EYO87_15405"
                     /inference="COORDINATES: protein motif:HMM:PF03023.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67352.1"
                     /translation="MTAMTQARRKSLLGSGSAQFAGQFLGLLLAILVSHLIARRMGVG
                     PQADAFLLGRRLITAVTEALNQIVVAVFIPLIAAQAAAGAGIWHIIMRSGGGALLAGT
                     ALAAIFIAGAPWIVASVAPQFDAQTAALATRVMRILSLALPATVATVALAAYCNVREQ
                     FGGAAASRQLPRAAVAAALLLGTGGLAELAAGAYTFGAVLVTGMLLLMALRLSRTAPI
                     QTGIRRSGSVSRRAAAAVVLAGGAMVVLWLETAFAAWTGPGGVAMLEYSQRLGALLGN
                     TLAMALTLVVFADLSRRSAAGETRELDARFNIAVWAGISLMLPVTVGVVVNAPGIIEL
                     VLGYGAFEAAEIRAEVVTLTRWMAVAPLGALVVRMLYVRVLADDTLPVVRIALVATIA
                     DMVIRAVLFRILVPWLGLTGIPLSLVITPIGPVLIIALWLRRQNVFLDLRPASISRPL
                     MATSLTASLAIAAGAWLGPLLSQWTALDGKSAALSGLLVSGLAGSAVLGVAVTAFRVR
                     LR"
     gene            complement(3844..4749)
                     /locus_tag="EYO87_15410"
     CDS             complement(3844..4749)
                     /locus_tag="EYO87_15410"
                     /inference="COORDINATES: protein motif:HMM:PF00685.25"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase"
                     /protein_id="HIC67353.1"
                     /translation="MPADPASGKRAVFVLGLQRSGTTWVANMLHGSGSVAAVAAEDHR
                     GVHESLFFSHFARAFTPLSNRDTCAAFRAAFVSSDYWLLGGLPDETLDDIMSSAKDHA
                     AVFEAMMDAVADRQQAPLWLEKSPHHTLLARALAQRFPAARFVCVIRDSRTLIASRLS
                     AYGRSPRKGPGRLVDIVRGALANALHTRYLRRFAADDPRAHLVQYDALAADPDGGRAA
                     LVRALDLPVSPDALVSRFAANTSHDRDPSTRRLSRTDRAAVALGDALGRILPIALLGG
                     IERKRRQARGADWPDWVWKRSGFRP"
     gene            complement(4739..5881)
                     /locus_tag="EYO87_15415"
     CDS             complement(4739..5881)
                     /locus_tag="EYO87_15415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011910334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HIC67354.1"
                     /translation="MTVLFWASAIALFYSLFGYGMLLLALSRLRPRRTPPAGPGDPPN
                     VSFLVAAYNEAPVIADKVENTLALNTGGADIELIVVSDGSADETAEIVRKVDDPRITV
                     LEPGRVGKAQALAQGLKCCTGDIVVFSDANAILEKNSLTAMLRHYADPEVGGVCGQIT
                     VEGKSGGIGFAESLFWRYDQQLKHAESRLGGAISAQGSVYSLRRALVRPPAPGCTDDF
                     VISVGAVAQGYRLVFEPDASTVENVTENVGNEMRRRIRSSERGWRSLLQNAGLMNPLR
                     HGWYAWQLFSHKLMRRLNPFFLILLFVSNLALMGQNLFYLATGLFQIAFYGVAAAGLV
                     WPHLRRNKLVALPAFFTFAHIALLIGILRCLFGRQSVLWTPSRDAG"
     gene            complement(5878..>6784)
                     /locus_tag="EYO87_15420"
     CDS             complement(5878..>6784)
                     /locus_tag="EYO87_15420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011910335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="colanic acid biosynthesis glycosyltransferase
                     WcaL"
                     /protein_id="HIC67355.1"
                     /translation="AALFPKAVALGRWCRTNGVQHIHAEFAGHPANAALIASRLAGTE
                     FSFSAHANDIFVSQALLPEKARKAAFVRSISAYNIRWLTRLAGFPADKLRLIRCGVVR
                     ETLDAPAPNPPATDGLRILYVGSLIRKKGVAHLLDALALLPADMRWQARIVGGGDLAK
                     ALQTQAADLGLSEKVRFDGPQPAEIVAEAYRDSHVLVVPSIPGENGRVEGIPVVLMEA
                     MAHGRAVVASNLSGIPELVEPGRTGWLTPPGDAPAIAAALGEIARNWDDAAAIAHAGR
                     GRIADEYLIEENAAALAREMERSCR"
BASE COUNT         1262 a         2126 c         2124 g         1272 t
ORIGIN      
        1 ccgtcggcct ggtcttcagc gccagcatcg ccgccgccga ttgcgcggcc ccttcccagg
       61 tcagttcggc ttcgacgatc cccgccgacg aggccccggt ttcgcccagc gcggccgcaa
      121 aaccgcgcag acgctcttct cgcgccgatg tctgcgcggc caccgacaga aaggctatcc
      181 ggtgatgtcc cccgccgacc aggtgccgga tcgccaggcg cacgccctcg aggtagtccg
      241 cgccggcata atccgtgatc ccttcgccga cctcccgcaa ggcctgcacc acgggcacgc
      301 cgcgatgccg caggcgcaaa ggcagatccg gatcggtgcc ttcggccgga cacaggatca
      361 cgccatcgac gccatgaccc cgaaacctct gcaggatgtc gttctgacgc accggatcgt
      421 cctggctgtt ggccagaaga acgaccctgt catcctcgcc catgacctgt tcgacccccg
      481 acaggaattc ggtgaagaag gaattgacga ggttcggcac gatgacaccc acggtgcggc
      541 tgctgttgtt gcgcagcctc gcggccccga tatcgcggac atagtcgaga tcggccatga
      601 ccttctcgac cttttcgcgc gtatgatcgg cgaccagcgg cgatttccgc accaccagcg
      661 agaccgtcgc ccgtgaaacg cccgccaccc gcgcgacctc ggccaatgtg accttcttgc
      721 ggttcatgct gcgccctcct gtttgccctt tcatagcgaa atccagaaga tgcgacaggc
      781 tcggtcaacg tcaccaactc gcagattggc gcacagggcg cagcgacgtc ttgggaaccg
      841 atgaacggcg tgaccaactt tttcgaaacg cccgggtcac ggcttcaact tgcggttggc
      901 agaatcgaca atcccggggg tgatgccggt cgtggcccag ggtcgagcga atcagcaact
      961 gcatttgctt gggattacct caacccacgg aggaaatatg tttttaaatt aatcttaaag
     1021 aagagcctcc ggcacttgcc ttgccagaaa cttttctgcc acgaaatgga cgacgctact
     1081 ggcgccgtcc acccaagacc gttgcctgaa tttcacctat ccctaactga atgaatattt
     1141 taatttccga aatccttgtc catctctttc tggaagagga gaggcctgcg ctgatcggcg
     1201 ctttttcgcg gtcctcgggt agcaagaaag cgggtttcag ccgttcacgt ggagttgact
     1261 tagcgccctc ccagcctgca agatcagaaa gataaaaatt tagcggtatc gaggttatta
     1321 tgagttccgt gattggcttt cgcgatacgt ggccgtttgg ttatcgcctc tataatgttg
     1381 ccgttgcgac cctccttctg gttgcactca gcccgacaat tctacttctg gccttcctgc
     1441 tcttgataac ccagggtccg aatatccttt atttcgggcc gcggatggga aagaatcaac
     1501 gcccgttcca gatcatcaag ttccggaccc tgtgcccgaa gcgcgcgcgg gcgatcaccg
     1561 cagatcgcac cctgcccgcc gatgcgaata tcgaaactcg acttggaaag attctgcgcg
     1621 aggtccggct ggacgagctt ccgcagcttg tgaatatcat tcgtggcgac atgaatatct
     1681 gcggaccgcg ccccgtgcgc cccgagatcg cggcgatcga gagtcggcgc atcaagggat
     1741 acgagaagcg gttcgacgtt cggcccgggc tgatcggtcc gacccaggcg tgcttcggtc
     1801 acggcgccag caagcggata cgcgcgcgaa tgaacaatct ggctgtcaat cgtccggtga
     1861 atattgcagc cgagctttcg ctgctggtcc ggatcggaag ctccatcctg catcggatcg
     1921 ggaagaaatc ggtgaaattc gcgaaaagat tttccaccgg gaagacctcg gcgttcaagg
     1981 acatctatct ttctgatatc gtgcagaaca agccgtcgct cgttcatcgc atcgatatgt
     2041 cgtcattgtc ggtgaggggg gttgacctgc catcggatgg gcatttggcg atccgcctgc
     2101 attccggcgc cttgcgccgg gcgcgcgtaa agttgacaca gtccggagcg ccgggaattt
     2161 tcaactacaa gcccgtcaac gaagtcgacg catttgtcat tgaacggtat gctctgggca
     2221 gggtgatcat tccgcctcgc gtggcctggt caatcgagtc gaggcagccc gaactggccg
     2281 gacaggaagc aggcatataa atccgatgac agcgatgacg caggcccggc gcaagtctct
     2341 cttgggttcg ggcagcgcgc agtttgccgg ccagtttctg ggattgttgc tggcgattct
     2401 ggtgtctcac ctgattgcgc gccgcatggg cgtcggtccg caggccgacg ccttccttct
     2461 ggggcggcgc ctgatcaccg ccgtgaccga ggcgctcaac cagatcgtcg tggccgtttt
     2521 cattccgctg atcgcggcgc aggccgccgc cggcgccggg atctggcata tcatcatgcg
     2581 atcggggggc ggtgccttgc tggcgggcac ggcactggct gcgatcttca ttgccggggc
     2641 gccatggatc gtcgcatcgg tcgcgccaca attcgatgcc caaaccgcgg cactggcgac
     2701 gcgcgtcatg cgaattctgt cactggcatt gccggcgacc gtcgctactg tcgcgctggc
     2761 cgcctattgc aatgtccgcg agcagttcgg aggcgctgcg gcgtcgcggc aattgccccg
     2821 tgccgccgtg gcggcggccc ttcttctggg cacaggcggt ctcgcggagc tggcggcagg
     2881 cgcctatacg ttcggggcgg tcctggttac cggaatgctt cttctgatgg ctctgcggct
     2941 aagccgcaca gcgcccatac agaccggcat ccgccgttcc ggttcggtct cacggcgtgc
     3001 cgccgccgcc gtcgtgcttg cgggcggcgc aatggtggtg ctgtggctgg aaacggcgtt
     3061 cgccgcgtgg accggccccg gcggggttgc catgctggaa tattcgcaac gtctgggcgc
     3121 gctgttgggc aatacactgg ccatggcgct gaccttggtc gtcttcgccg atctgtcgcg
     3181 gcgcagcgcc gcaggagaga cccgggaact ggatgcgcgg ttcaacattg cggtctgggc
     3241 aggcatctcg ctgatgttgc cggtgacggt gggtgtggtg gtgaacgccc ccggtatcat
     3301 tgaactggtg ctgggctacg gcgcgttcga agccgccgaa atccgggccg aagtcgtgac
     3361 actgacacgc tggatggcgg ttgcgcccct cggcgcgctg gtcgtgcgga tgttgtatgt
     3421 ccgggtgctg gcagacgaca cgcttcccgt cgtgcgcatc gcgctggtcg ccacgatcgc
     3481 ggatatggtg atccgcgccg tgcttttccg gatcctggtg ccttggctgg gactgaccgg
     3541 aattccgctg tcgctggtga tcaccccgat cgggcccgtc ctgataatcg cgctgtggct
     3601 gaggcggcaa aacgtgttcc ttgacctgcg tccggccagc atcagtcgcc cgttgatggc
     3661 cacctcgctg acggcaagcc tggcgatcgc ggccggcgca tggcttggcc ccctattgtc
     3721 gcaatggact gccttggacg gcaaaagcgc ggccctgtcc ggcttgctgg tttcgggtct
     3781 ggcgggatcg gcggtgcttg gcgtcgcggt cacggcgttt cgcgtccggc tgcgttgacg
     3841 ccatcagggt ctgaacccac tgcgcttcca gacccaatcc ggccagtcgg cgccgcgggc
     3901 ctgccgccgc ttgcgttcga tcccgccaag aagggcaatg ggcagaattc ggcccaatgc
     3961 gtccccaagc gccacggcgg cgcggtcggt gcgggacaga cgtcgggtcg aagggtcgcg
     4021 atcatggctg gtattggccg caaaacggct gacaagcgcg tcaggtgaca ccggaagatc
     4081 gagcgcccgg accagcgccg cccgcccccc gtcgggatcg gcggcgagcg catcgtattg
     4141 gaccagatgc gcgcgcgggt catcagccgc aaagcggcgc agatagcggg tatgaagtgc
     4201 attggcgagt gcgcctcgca cgatatcgac caaccgccct ggtcccttcc gtggactgcg
     4261 cccataggcc gaaagccgtg acgcgatcag ggtgcggctg tcccggatga cgcagacaaa
     4321 ccgcgcggcg ggaaaacgtt gcgcaagggc ccgcgcgagc agggtgtgat ggggcgactt
     4381 ttccagccac agcggcgcct gctgacgatc ggcaacggca tccatcatcg cctcgaatac
     4441 cgcagcgtgg tccttggccg atgacatgat gtcatcaagg gtttcatcgg gcagcccgcc
     4501 cagcagccag taatcggatg acacaaaggc cgcgcggaag gccgcgcatg tatcgcgatt
     4561 cgaaagcggc gtgaaggcgc gggcaaaatg ggaaaagaaa aggctttcat gaacgccgcg
     4621 atgatcctcg gccgcaacgg ccgcgacaga tcccgaaccg tgcagcatgt tggccaccca
     4681 ggtcgtgccc gagcgctgaa gccccagcac gaaaacggcg cgctttcccg aggcggggtc
     4741 agccggcatc gcgcgatggc gtccacaaga cgctttgtct gccgaaaaga cagcgcagga
     4801 ttcctatcag caacgcgatg tgagcgaagg tgaagaaggc aggcaaagcc accagcttgt
     4861 tgcggcgaag atgcggccag acaagtccgg ccgccgcgac cccgtaaaag gcgatctgaa
     4921 aaagtccggt cgcaagataa aagaggtttt gacccatcag agccaggttc gaaacgaaca
     4981 gcaggatcag gaaaaaaggg ttcagccttc gcatcagctt gtgcgagaaa agctgccatg
     5041 cataccagcc gtggcgcagt ggattcatca ggccggcgtt ttgcagcagg ctgcgccagc
     5101 cccgttcgct ggaacggatg cgccgacgca tctcgttgcc gacattctcg gtgacgttct
     5161 cgacggtgct ggcatcgggt tcgaaaacca ggcgatagcc ctgcgcgacg gcgccgaccg
     5221 atatgacgaa atcgtcggtg catcccggcg ccggcggacg gacaagtgcg cgacgcagcg
     5281 aatagaccga gccctgcgcc gagatggccc cgcccaggcg cgactcagcg tgtttgagct
     5341 gttgatcata gcgccagaaa aggctttcgg caaaaccgat accgcccgat ttgccctcga
     5401 ccgtgatctg tccgcacacg ccgccgacct cggggtctgc gtagtggcgc agcatcgcgg
     5461 tcagggaatt cttttcaaga attgcgttgg catccgaaaa gacgacgatg tcgccggtgc
     5521 agcatttcag tccttgggca agcgcctgcg ccttgcccac acgaccgggt tcaagcaccg
     5581 tgattcgggg gtcgtccacc ttgcgcacga tctcggcggt ttcgtccgcc gaaccatcag
     5641 agacgacgat caactcgatg tccgccccgc ctgtgttcag cgcaagagta ttctcgacct
     5701 tgtcggcaat caccggcgcc tcgttatagg cggccaccag gaagctgaca ttcggcgggt
     5761 ccccaggacc ggcgggcggg gttcgtcttg ggcgaagccg cgacagggcc agaagaagca
     5821 tcccatagcc gaagagactg taaaacaacg caatcgcaga agcccagaac aagactgtca
     5881 tcggcaagaa cgctccattt cccgcgcaag ggccgcggcg ttttcctcga tcagatattc
     5941 gtccgcgatt cggccacgcc cggcatgggc gatggcggcg gcatcatccc agttccgggc
     6001 aatctcgccc agcgccgcgg cgatcgccgg cgcatcgccc ggtggggtaa gccaaccggt
     6061 ccggccgggt tcgacaagtt cgggaatgcc cgaaaggttg ctggcaacga ccgcccggcc
     6121 atgcgccatc gcctccatca ggacaaccgg aatcccctct accctgccat tctctccggg
     6181 gatcgacggc accacgagca catgggaatc gcgataggcc tctgccacga tctcggcggg
     6241 ttgcgggccg tcgaaccgaa ccttttcgga cagcccaaga tccgcggcct gggtttgcag
     6301 tgccttggcc agatcgccgc caccgacgat gcgggcctgc cagcgcatat ctgccggaag
     6361 cagcgcgagg gcgtccagaa gatgcgcgac gccctttttc ctgatcagcg atcctacata
     6421 aagaattcgc aacccgtcgg ttgcaggcgg gttcggcgct ggcgcatcca gcgtctcgcg
     6481 aacgacgccg cagcggatca gacgcaactt gtcggccgga aacccggcca gtctggtcag
     6541 ccagcgaatg ttataggcgc ttatggaccg gacgaacgcg gcttttcgcg ccttttcggg
     6601 caaaagcgcc tgcgatacga aaatgtcgtt ggcatgggcc gaaaagctga attctgttcc
     6661 cgcaagccgg gatgcgatca gtgcggcatt cgcggggtgg ccggcaaatt ccgcgtgaat
     6721 atgctggact ccgttcgttc ggcaccatcg gccaagcgcg accgccttgg gaaacagagc
     6781 cgcc
//
LOCUS       DTVW01001168            1420 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2423878, whole
            genome shotgun sequence.
ACCESSION   DTVW01001168 DTVW01000000
VERSION     DTVW01001168.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1420)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1420)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1420
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2423878"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..142
                     /locus_tag="EYO87_15425"
     CDS             <1..142
                     /locus_tag="EYO87_15425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007529732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HIC67356.1"
                     /translation="QLGQTYQALCSAGKPAKVALTAVMRKLLILANALIRDDRKWAET
                     AP"
     gene            complement(164..910)
                     /locus_tag="EYO87_15430"
     CDS             complement(164..910)
                     /locus_tag="EYO87_15430"
                     /inference="COORDINATES: protein motif:HMM:PF03938.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpH family outer membrane protein"
                     /protein_id="HIC67357.1"
                     /translation="MRGRARPVVLLAALFLGMAWAGGASAQDPAPSVPAQPIAPVDRI
                     APADGAGAEGGMPTRTIETPPDSPQMVAAPILTVDQNTLFTGSAWGRRTQSVLEEEGG
                     KIAAENERLAAQLSDEEAALTSRRETLDPAEFRKQAEAFDERATRVRRERAQAVQALN
                     DWAEADRSAFYRAALPVMGEMMQDRRAVAVLDRRTVFVSLDAIDITADLVLRLDERLG
                     DGAGQVPLPSAQGDGQAPAAEIPQPPAAAD"
     gene            complement(910..>1420)
                     /locus_tag="EYO87_15435"
     CDS             complement(910..>1420)
                     /locus_tag="EYO87_15435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011750233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamA"
                     /protein_id="HIC67358.1"
                     /translation="VTSTALAGVESNAWREEVTLRAEVEAGGVYSYGDYSSWILDRFR
                     GGGKVRGFEPNGIGPRDLSAPNQDALGGKYYWAARAEAQFPLGLPEEYGITGGLFADI
                     GSVWGLDTRTGSDGSEVDDSMRVRAAIGASVFWTTPIGPLRFNFSKAVRKEDYDKDQN
                     FDLTISTRF"
BASE COUNT          233 a          503 c          463 g          221 t
ORIGIN      
        1 gcagctcggc cagacctatc aggcgctctg cagcgcggga aagccggcga aagtcgcgct
       61 caccgccgtc atgcgcaagc tcctgatcct cgcaaacgcc ctgatcaggg atgaccgaaa
      121 atgggccgaa accgcccctt gatcaaaacg gataaattct gcatcaatcc gcggcggcgg
      181 gcggctgcgg gatttcggcg gccggtgcct ggccatcgcc ctgcgctgac ggcaacggca
      241 cctgtccggc accgtcgccc agcctctcgt ccagccgcaa caccagatcg gcggtaatgt
      301 cgatggcgtc gagcgagacg aagacggtgc ggcggtccag aacggccacc gcgcggcgat
      361 cctgcatcat ctcgcccatg accggcagcg cggcgcgata gaaggcgctg cggtccgcct
      421 cggcccaatc gttcagcgcc tgcaccgcct gtgcgcgttc gcgccggacc cgcgtggcgc
      481 gttcgtcgaa cgcctcggcc tgcttgcgaa actcggccgg atccagcgtt tcgcgacggc
      541 tggtcaacgc cgcctcttca tcggataact gcgcggccag cctttcgttc tcggcggcga
      601 tcttgccgcc ctcctcttcc aggacggatt gcgtgcgacg gccccaggcc gagccggtga
      661 acaaggtgtt ctgatccacg gtcaggatcg gcgcagccac catctgcggc gaatccggcg
      721 gcgtctcgat ggtgcgcgtc ggcatcccgc cttccgcacc ggccccgtcg gccggggcga
      781 tccggtccac gggtgcgatg ggctgggcgg gcacggaggg cgccggatcc tgcgctgatg
      841 cgcccccggc ccatgccatg cccagaaaca gggccgccag caggacgaca gggcgcgccc
      901 gtccccgcat cagaaccggg tcgagatggt caggtcgaaa ttctgatcct tgtcgtaatc
      961 ctctttgcga accgccttgg agaagttgaa ccgcaagggg ccgatcgggg tggtccagaa
     1021 gacagaggcg ccgatggcgg cgcgaacccg catactgtcg tcgacttcgg acccgtcgct
     1081 gccggtcctt gtgtccagcc cccagaccga gccgatatcg gcaaaaaggc cgcccgtgat
     1141 gccgtattcc tcgggcaggc ccagcgggaa ctgcgcttcg gcgcgcgcgg cccagtaata
     1201 cttgccgccg agcgcgtcct gattcggggc cgacaggtca cgcggaccga tgccgttcgg
     1261 ctcgaagccg cgcaccttgc cgccgccgcg gaaccggtcc agaatccagg acgagtaatc
     1321 gccatagctg tagacaccgc cggcctcgac ctcggcgcgg agggtgacct cctcgcgcca
     1381 ggcattgctt tccacaccgg ccagcgcggt gctggtgacc
//
LOCUS       DTVW01001169            2334 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2424002, whole
            genome shotgun sequence.
ACCESSION   DTVW01001169 DTVW01000000
VERSION     DTVW01001169.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2334)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2334)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2334
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2424002"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(177..500)
                     /locus_tag="EYO87_15440"
     CDS             complement(177..500)
                     /locus_tag="EYO87_15440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009828663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HIC67359.1"
                     /translation="MRDFVDGSAFNFEQGQRARKLFAAVVLAALDDAIADDKKYGNGP
                     EQIARWARSRDGREVLSCAGIDPNERVVKGLMDFVSKGVRTSVALSREESERRMAAEA
                     EAEAA"
     gene            861..1424
                     /gene="efp"
                     /locus_tag="EYO87_15445"
     CDS             861..1424
                     /gene="efp"
                     /locus_tag="EYO87_15445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019954463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HIC67360.1"
                     /translation="MPKINGNEIRPGNVLEHDGGLWAAVKVNHVKPGKGGAFAQVELK
                     NLRDGRKLNERFRSEDKVERVRLDQKDQQFLYEMDGKLVFMDSQTFEQTELDAELLGD
                     RRPFLQDGMTATIEYYGDEALSVSIPQKVVCKVAETEPVVKGQTAANSYKPAMLDNGV
                     RIMIPPFVGEGEDIVVNTEVFEYSERA"
     gene            complement(1537..>2334)
                     /gene="dinB"
                     /locus_tag="EYO87_15450"
     CDS             complement(1537..>2334)
                     /gene="dinB"
                     /locus_tag="EYO87_15450"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase IV"
                     /protein_id="HIC67361.1"
                     /translation="ADYTPLIEPLSLDEAYLDVTDHLWPGQTATQVAREIRARIREAT
                     ALTASAGVSYNKFLAKLASDQNKPDGLCVITPDRGPDFVLALPVGKFHGIGPATAGKM
                     RAMGIETGADLRAQDLDFLTRRFGKSGRYYWNISRGIDHRQVRSDRIRKSVGAENTYF
                     TDLMDLAQAHDALAPLAGKVWRHVSRHGLRGRTVTLKVKFSDFQQITRARTLPRAVGS
                     EAEMLSIARELAGAVLPDPRGARLLGITLSGFDRDEDRDPVQLDLFG"
BASE COUNT          428 a          783 c          725 g          398 t
ORIGIN      
        1 cgccggtcgc cggcccggcc ctgtcctgca cgccggatac agcgctggaa ccggctgcgc
       61 cggccaccag ccgtcgcacc cggtccgcag gaaaatggaa aacccccgca gatggcgggg
      121 gccttgttac cgatccgtgc ggtttcagtc ttgtctgcga gcgatccgca gaggggtcac
      181 gccgcctcgg cctcggcctc ggcggccatg cgccgttcgc tttcctcgcg cgacagcgcc
      241 accgaggtcc ggacgccctt cgagacgaag tccatcaatc ccttgacgac ccgctcgttc
      301 gggtcgatcc cggcgcagga cagaacctcg cgtccgtcgc gcgaacgcgc ccaccgggcg
      361 atctgctcgg ggccgttgcc gtatttcttg tcatctgcaa tggcgtcatc caaagcagcc
      421 agaaccaccg ccgcaaacag cttgcgggca cgctggccct gctcgaaatt gaaagccgag
      481 ccgtcaacaa aatcgcgcat atcgttcgtc catttcctct ggcccgatga taccaccgag
      541 gcccttgcgg gaagactctg ggtcaaccct tcgttttttc ttccgtttct ccgacggtgc
      601 cgtttggctt agaccatcct gaccccgatt cgatattact tcgactgcat gacagccatg
      661 cgtagcctgc aaggcgggca aaaacacgca aaatttcgac ggcccgccgg tcggcggcgg
      721 ccttccgcca cggatatcag cttgacaacg cccgcatacc gttccggttg ccagccacgg
      781 cctgtcccga tataggggcg cttcaacgcc attcaacgtc tggacggcgc gaacctctca
      841 tcatccgtca agagaatccc atgcccaaga tcaacggcaa cgaaatccgg cccggcaatg
      901 tgctggaaca tgacggcggc ctctgggccg ccgtgaaggt caatcacgtc aagccgggaa
      961 agggcggcgc cttcgcccag gtcgagttga aaaatcttcg cgacggccgc aagctgaacg
     1021 aacgtttccg cagcgaggac aaggtcgagc gtgtccggct ggaccagaaa gatcagcaat
     1081 tcctgtatga aatggacggc aagctggtct tcatggacag ccagaccttc gagcagaccg
     1141 aactggacgc cgaattgctg ggcgatcgtc gccccttcct gcaggacggc atgaccgcga
     1201 ccatcgaata ttacggcgac gaggcgcttt cggtctcgat cccgcagaag gtcgtctgca
     1261 aggtcgccga gaccgagccg gtggtgaagg gccagaccgc cgccaacagc tacaagcccg
     1321 cgatgctgga caacggcgtt cgcatcatga tcccgccctt cgtgggcgag ggcgaggata
     1381 tcgtggtgaa taccgaggtc ttcgaataca gcgaacgggc ctgacgcgcg ccacgtcctg
     1441 accgggtgaa gatcggactt cccgggccct gtccggcagg atggcgcgcc ctgtcggagg
     1501 gtcgggacgc cgcccggcgc ggtggcatgc cgatttctac ccgaacaggt ccagctgcac
     1561 cggatcgcga tcttcgtcac gatcgaaacc cgacagcgtg atccccaaca gccgggcgcc
     1621 gcgcggatcg ggcaggacag cgccggccag ttcgcgggcg atggacagca tctcggcctc
     1681 ggatcccacg gcgcgcggca gggtccgcgc ccgtgtgatc tgctgaaaat ccgaaaactt
     1741 gaccttcagc gtcaccgtcc gtccccgcaa gccatggcgg ctgacatggc gccagacctt
     1801 accggccagg ggcgccagtg cgtcatgcgc ctgggccagg tccatcaggt cggtgaaata
     1861 ggtgttttcg gccccgacgg attttcggat gcggtcggac cggacctgcc ggtgatcgat
     1921 gccgcgcgag atgttccagt aatagcgccc cgacttgccg aaacgccggg tcaggaaatc
     1981 aaggtcctgc gcccgcagat cggcgccggt ctcgatcccc atcgcgcgca tcttgcccgc
     2041 cgtcgccggg ccgatgccgt gaaacttgcc caccggcagg gccagcacga aatccggtcc
     2101 ccgatcgggc gtgatcacac aaagcccgtc gggcttgttc tggtccgagg ccagcttggc
     2161 cagaaacttg ttgtagctga ccccggcgct ggcggtcagc gcggttgcct cgcggatgcg
     2221 ggcgcggatc tcgcgggcca cctgcgtcgc cgtctggccg ggccagaggt ggtcggtcac
     2281 gtccagatag gcctcgtcca gcgacagggg ctcgatcagc ggcgtgtaat cggc
//
LOCUS       DTVW01001170            2283 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2424432, whole
            genome shotgun sequence.
ACCESSION   DTVW01001170 DTVW01000000
VERSION     DTVW01001170.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2283)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2283)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2283
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2424432"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..365)
                     /locus_tag="EYO87_15455"
     CDS             complement(<1..365)
                     /locus_tag="EYO87_15455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide export protein"
                     /protein_id="HIC67362.1"
                     /translation="MTVPFSPAAAMRLVLVAALTLLSACALPRSGPTKGEIYAGSVER
                     GGNANVVYVNDQVTRAANFVPTYGFSSGFRNAGQVGADEIRPGDVLGLSIWENVDDGL
                     LTSLGSSSTNLQEIQVDSAG"
     gene            complement(416..1801)
                     /locus_tag="EYO87_15460"
     CDS             complement(416..1801)
                     /locus_tag="EYO87_15460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013068774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule biosynthesis protein CapA"
                     /protein_id="HIC67363.1"
                     /translation="MFHNPLDHSDSDPSQAGLPAMEERVFLLLQGPHGPFFNRLGHLL
                     RQAGATVWRCGFNAGDEFFWDDKDHFIRHEATIQDWPAHLNRILVEKNVTDLVLYGDV
                     RPIHAIARSAAHQEALRFHVFEEGYLRPYWISYERGGSNGSSPLLEISLSQMRAALRD
                     TSAEIHRPPAHWGDMRHHKFYGALYHFLVLAANRRYRRYAGHRAITVRQEFRLNLQRL
                     MLMPAYNLKRALRWRRIKLSGQPYSLVLLQLEHDSNFLGHSPFRRNSEFVETVIAEFA
                     RSAPRHHHLILKAHPLEDGRARNRHAIRDSAASHGLTERVHYLRGGKLADLMAHARSI
                     VTVNSTAAQQALWRGIPVKALGCAVYQKTGITSDQTLADFFKAPRAPDPHAYRIFRDY
                     LLQTSQVPGGFYSRRSRAHALRLVADMMLAPLDPYETLADGHVTHRQQITDPVAWIPC
                     SCGPGARQTLD"
     gene            1994..>2283
                     /locus_tag="EYO87_15465"
     CDS             1994..>2283
                     /locus_tag="EYO87_15465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018000449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin synthase"
                     /protein_id="HIC67364.1"
                     /translation="MFTGIITDMGEVRVVEMRGDMRARIGCGYDMAGVDLGASIACDG
                     VCLTVIAKGADWFDVDISAETLSKTNIGANGWAVGKRLNLERALKVGDELGG"
BASE COUNT          419 a          662 c          785 g          417 t
ORIGIN      
        1 cccgcgctgt cgacctgaat ttcctggagg ttggttgaac ttgatcccag cgatgtcaga
       61 agcccgtcat cgacgttttc ccagatcgac aggcccagca catcgcccgg ccggatctcg
      121 tccgcgccga cctggcccgc attcctgaag ccgctcgaaa agccgtaggt cggaacgaaa
      181 ttcgcggcgc gggtgacctg atcgttgaca tagaccacat tggcattgcc gccccgctcg
      241 accgagcctg cgtaaatctc gcccttggtg gggccggacc gtggcagggc gcaggcggac
      301 agcagcgtca gggccgcaac caagaccagc cgcatggcgg cggcgggtga gaatgggact
      361 gtcacctcga atactcctgt cttgctcgtc ccggcccttg ttgtccggtt tgcagttaat
      421 ctagcgtctg ccgggcccct gggccacaag aacaggggat ccatgccacc ggatcggtga
      481 tttgctgccg atgtgtcaca tgtccatcgg ccagtgtctc gtaagggtca aggggggcca
      541 gcatcatatc ggccaccagc cgcaatgcgt gggcgcgcga gcggcgcgaa tagaagccgc
      601 cgggtacctg gctggtctgc aacagatagt cgcggaagat gcggtaggcg tgcggatccg
      661 gggcacgcgg cgccttgaag aagtcggcca gggtctggtc cgaagtgatc ccggtcttct
      721 gatagaccgc gcatccaagc gccttgaccg gaatgccgcg ccaaagcgcc tgctgcgcgg
      781 ctgtcgaatt cacggtcacg atggaccgcg catgggccat cagatcggcc agcttgccgc
      841 cgcgcagata atggacccgt tccgtcagcc cgtgactggc cgcggaatcg cggatcgcgt
      901 ggcgattgcg cgcgcggccg tcctccagcg gatgggcctt taagatcagg tggtggtgac
      961 gtggcgccga gcgggcgaat tccgcgatga ccgtctcgac gaattcggaa ttcctgcgaa
     1021 agggcgaatg accgagaaag ttcgaatcgt gttcgagctg cagcagaacc agcgaatagg
     1081 gctgacccga cagcttgatc cgccgccatc gaagcgcgcg tttgaggttg taggccggca
     1141 tcagcatcag cctttgcagg ttcagccgga attcctgccg gacggtgatc gcgcggtggc
     1201 cggcatagcg gcgatagcgc cggttcgccg ccagaaccag gaaatgatac agcgcgccat
     1261 agaacttgtg atgacgcatg tcgccccaat gcgcaggcgg gcggtggatt tccgcggagg
     1321 tgtcgcgcag ggccgcgcgc atctgcgaca gtgaaatttc caggagcggc gaggatccgt
     1381 tcgagccgcc gcgttcatag ctgatccagt agggccgcag atagccctcc tcgaagacgt
     1441 gaaaacgcag ggcctcctga tgggcggcgc tgcgggcgat ggcgtggatc ggccgcacgt
     1501 cgccgtaaag cacgagatcg gtgacgttct tctcgaccag gatgcggttc agatgggcag
     1561 gccagtcctg aatggtcgct tcgtggcgga tgaagtgatc cttgtcgtcc cagaaaaatt
     1621 cgtcgccggc gttgaaacca cagcgccaca ccgtcgcgcc cgcctgccgc aacaggtgcc
     1681 cgaggcggtt gaagaagggt ccatgcggtc cttgcagcag cagaaacacc ctttcttcca
     1741 tcgcgggaag accggcttgc gatgggtcgc tgtctgaatg gtcaagaggg ttgtgaaaca
     1801 tcggccggca aagtgacaag gtgcaattgc cggacagttt gcacgttcgg gtggtatttt
     1861 ccacgatttt gtcgcgtcag gaggaccggc cggcgtcgcg tcgcgccaga ttcgggcggt
     1921 gggcgatcgg cccatgcctt gcgcggcgtg ggccgatcgc ctaggtcatt gcgcgtgcac
     1981 agggggcttg gcgatgttca cgggcatcat cacggatatg ggcgaggttc gcgtggtcga
     2041 gatgcgcggc gacatgcgcg cgcggatcgg ctgcggctat gacatggcgg gcgtcgatct
     2101 gggtgcctcg atcgcctgcg acggggtttg tctgacggtg atcgccaagg gcgccgactg
     2161 gttcgatgtg gatatttcgg ccgagacgct gtcgaaaacg aatatcggcg cgaatggctg
     2221 ggcggtcggc aaacggctga atctggaacg ggcgctgaag gtgggcgacg aactgggcgg
     2281 cca
//
LOCUS       DTVW01001171            3336 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2424762, whole
            genome shotgun sequence.
ACCESSION   DTVW01001171 DTVW01000000
VERSION     DTVW01001171.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3336)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3336)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3336
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2424762"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            366..818
                     /locus_tag="EYO87_15470"
     CDS             366..818
                     /locus_tag="EYO87_15470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009827337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67365.1"
                     /translation="MGNHLFRSGKHGRRGDRYRDAGRGGHGDDRSGFGDIAPARGPRI
                     AGAVLLGGLIVWSLLALGLWALVDPVLAWAAGMTGSATDLGVGFARWFGLGREASALR
                     DAANVDGLVGWAIGPVHVLAKAGLILIWLAGAAALVVLPAILRRRSRW"
     gene            complement(898..2013)
                     /locus_tag="EYO87_15475"
     CDS             complement(898..2013)
                     /locus_tag="EYO87_15475"
                     /inference="COORDINATES: protein motif:HMM:PF09678.8"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase assembly protein"
                     /protein_id="HIC67366.1"
                     /translation="MPIPAPRTARLRPIRPRVLLPVAALTMPSVALAHGGEGLSAAED
                     WTAWNLTPEISGPILLILAVYLRGAWRRRSVTGPVPALRHVLFGGGILALFLSLQSPV
                     DPMGERLFLAHQIQHLLLRMVGPMLVVLSRPQGLLIAGLPEFLRKWLVAPLMTDGAVS
                     GLYRRLTGPVTAFVIFLLSLYFWQIPPIHNAALLDPAIHWTMHLTMLAGGLVFFAMIF
                     DRRDLPSDPSHFLRVVLLFAAIVSNILLGAITVFKTSILYTAYDIEGRLFGIAPLTDE
                     TAGGFILWVPGSMMLVIAILVVVFDWNRTEGKRLRRGRDMAGPVRGPVSSGGDYGRRP
                     ARAATAANNRLGLLLGLGVLTIFGLILGTGIFILSVG"
     gene            complement(2023..3021)
                     /locus_tag="EYO87_15480"
     CDS             complement(2023..3021)
                     /locus_tag="EYO87_15480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009815494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase assembly protein"
                     /protein_id="HIC67367.1"
                     /translation="MNVAILDPLGPSLSPVALAVLGGVAWLYLRGMGRPRIVGEQVGP
                     VRHGLFAAGMLLLALAFEGPLAGAGQSLFLAHQVQHLVIRLLGPLLFILAYPGPVLRA
                     GLPRPVRRWLGRRKDHPAAQSAARALSRVGTSFVLLVASLYVWQVPVLHNAAVAMPPL
                     ALVAHLGMTLAGLNFFAVTLDRRSPPEGAPHGKRLLALVGVIVSNILLGSLTTMKEMV
                     LYPAYDAAGRLWDFAPMADEATGGYTIWVPSSFVILAAIILAFNGWNRTEVRRWNARH
                     NWSGSNSAALEFPETAYELRLKVAESNRRMGRTLALISVAMFATVIITGATIIYAF"
BASE COUNT          612 a         1106 c         1134 g          484 t
ORIGIN      
        1 gatcatcggc gccgccatcg ggctgttcat cgtgccgcgc acctggatct tgctgaaagg
       61 cgcgctcaac atcctgatgg agggaacgcc cgcccatgtc gataccgagt tgctgcgccg
      121 gcggctggcg gaaattccgg ccgtgaccgg ggtgcacgac ctgcatgtct ggaccctgac
      181 ctcgggcctc gacgcgatga gttgtcatct ggtcgtggac gacccggccc gcggcagcga
      241 tgtgcttgcc gcggcccgca aggcgatgaa agaggacttc gccatcaccc acaccacgat
      301 ccaggtcgag gacgccgagg cggccgagac cgaggatccg agccatatgt gaggacagag
      361 gcagcatggg aaaccatctc tttcgatccg ggaaacacgg gcgccgcggg gaccgatatc
      421 gcgatgccgg caggggcggc cacggcgacg accgcagcgg cttcggcgac atcgccccgg
      481 cgcgcggccc gcgcatcgct ggcgcggtcc ttctgggcgg gctgatcgtc tggagccttc
      541 tcgcgcttgg cctctgggcg ctggtcgatc cggtcctggc ctgggccgcg ggcatgaccg
      601 gctccgccac cgatcttggc gtcggtttcg cgcgctggtt cggccttggc cgcgaggctt
      661 cggcgttgcg cgacgcggcg aatgtcgatg ggctggtcgg ctgggcgata ggcccggtcc
      721 atgtcctggc caaggctggc ctgatcctca tctggctcgc cggggcggcc gcgctggtcg
      781 tgctgccggc gatcctgcgt cgccgatccc gctggtgaca tgcactgaac gacgctgatc
      841 cccgccgccg attgcggccc cgcgcgcgcg cccgtccggc gtttttcgac caggctgtca
      901 gccgaccgac aggatgaaga tacccgtgcc gaggatcagt ccgaatatcg tcagcacccc
      961 gaggcccaga agcagaccca gacggttgtt tgccgccgtc gccgcgcggg ccggtcttct
     1021 tccataatcg ccgccggacg aaaccggacc ccggaccggt ccggccatgt cccgacctcg
     1081 ccgcagccgc tttccctccg tccggttcca gtcgaagacg acaaccagta tggcgatcac
     1141 cagcatcatg ctgcccggca cccagaggat aaagccgccg gcggtctcgt cggtcaaggg
     1201 cgcgatgccg aaaagccgcc cctcgatgtc gtaggcggtg tagaggatgc tggtcttgaa
     1261 aaccgtgatc gcgccgagaa gaatgttcga cacgatcgcc gcgaacagca gcacgacacg
     1321 cagaaagtgc gacgggtcag agggcaggtc gcgccggtcg aagatcatcg cgaagaacac
     1381 cagcccgccc gccagcatcg tcagatgcat cgtccagtgg atcgccggat caagcagggc
     1441 ggcgttgtgg atcggcggaa tctgccagaa atagagcgat agaagaaaga tcacgaatgc
     1501 cgtgaccggg ccggtcagac ggcggtaaag tcccgagacc gcgccgtcgg tcatcagcgg
     1561 cgctaccagc cacttgcgca ggaattccgg caggcccgcg atcagcaggc cctgaggacg
     1621 cgacagaacg accagcatcg gccccaccat ccgaagcaaa agatgctgga tctgatgggc
     1681 gagaaacaac cgttcgccca tcggatcgac cggcgattgc agcgacagga acagcgccag
     1741 gattccaccc ccgaaaagga catgccgcag ggccgggacc ggtcctgtaa cggaacggcg
     1801 gcgccacgcg ccgcgcaggt agaccgccag gatcagcagg atcggaccgc tgatttcggg
     1861 ggtgaggttc caggccgtcc agtcttcggc ggccgaaagg ccttcgccgc catgagccag
     1921 cgcgacggaa ggcatggtca gggccgcaac aggcagcaag acgcggggcc ggatcggacg
     1981 aagccgggcg gttcggggtg cagggatcgg catcttggtc tcttagaagg cgtagatgat
     2041 tgtcgcgccg gtaatgatca cggtggcgaa catcgcgacc gaaatcagcg ccagcgtgcg
     2101 acccatgcgg cggtttgact cggccacctt cagtcgcaat tcatacgcgg tttcgggaaa
     2161 ttcgagcgcg gccgagttcg atccgctcca gttgtgccgc gcgttccagc gtcggacctc
     2221 ggtccggttc cagccgttga aggccaggat gatggccgcc aggatgacga aggacgaggg
     2281 aacccagatc gtgtaacccc cggtcgcctc gtcggccatt ggcgcgaaat cccacagccg
     2341 tccggcggcg tcatatgcgg gatagagcac catctccttc atcgtggtga gcgagccgag
     2401 caggatgttc gagacgatga caccgaccag cgccagaagc cgctttccgt ggggtgcgcc
     2461 ctcgggcggg ctgcgccggt cgagcgtgac ggcaaagaag ttcagacccg ccagcgtcat
     2521 gccgagatgc gccacaagcg ccagcggcgg catggcgacc gccgcgttgt gcagcaccgg
     2581 cacctgccag acatagagcg acgcgaccag caggacgaag ctcgtgccga cgcgggacag
     2641 ggctcgcgct gcgctctgtg ccgcgggatg gtctttgcgc cgcccgagcc agcggcgaac
     2701 cggccggggc agacccgccc gcaggaccgg cccgggatag gccaggatga acagcaacgg
     2761 ccccagcagc cggatgacca gatgctgaac ctgatgcgcc aggaaaaggc tttgccccgc
     2821 gcccgccagc ggcccttcga aggccagggc caacagcagc attccggccg cgaacaggcc
     2881 gtgccggacc ggtccgacct gttcgccgac gatgcggggc cggcccatgc cgcgcagata
     2941 gagccacgcg acgccgccaa gaacggcaag cgcgaccgga gacaggctcg gtcctagcgg
     3001 gtcgaggatc gcgacgttca tgcggtgacc cggtccgggc cgaccgcacc ggcgacggat
     3061 cgccgaaaac cgccagccgt cagcggccgg gggattcgat gcgtgtccct gtctctgggg
     3121 tccgaccgtc ggcggcttgc agtttcaaag atcattgcgc acgcgcgacc cggattgcag
     3181 ggatgggagg cacggacccg tgggctgcgg tcgagccccg ccagaaccat gccgccagca
     3241 tcgcgcctta tgcatcagtg ggctccagcc gccacagcat ccgcaggacg cttgcgtccg
     3301 tatctcgatg accaggcgcc tcatgggcaa gggccc
//
LOCUS       DTVW01001172            4206 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2425276, whole
            genome shotgun sequence.
ACCESSION   DTVW01001172 DTVW01000000
VERSION     DTVW01001172.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 4206)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4206)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4206
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2425276"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..446
                     /locus_tag="EYO87_15485"
     CDS             <1..446
                     /locus_tag="EYO87_15485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018301881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HIC67368.1"
                     /translation="PDMFWGLVVSFGIGNLILLVLNLPLIGIWVSMLRIPFRWLYPAI
                     VVFVCLGVYSVRGSSFDIAAVAVIGAIGYLLAMARFNPALLLLGFVLGPLIETNLRRA
                     MLIGRGDPMVFLQRPISAVFVVATVALIAASLWGAWRRFRSRTAA"
     gene            complement(424..1329)
                     /gene="cobD"
                     /locus_tag="EYO87_15490"
     CDS             complement(424..1329)
                     /gene="cobD"
                     /locus_tag="EYO87_15490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011749867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin biosynthesis protein CobD"
                     /protein_id="HIC67369.1"
                     /translation="MTPLIALTALALDVAIGWPDALFRRIGHPVSWLGRLIAALDRRW
                     NRGRAGMARGAAAALVVIAAAVIPALILQGLLGPLVAGLLAWPLVAARSLHHHLRAVA
                     RPLAAGDLQGARRATAKIVGRDVSRADAPALARASIESLAENASDGVVAPLFWAAVAG
                     LPGIAAYKAINTLDSMIGHRTPRHAEFGRFAARLDDAANWAPARLTALLFTCVAGGTA
                     WRTARRDARAHRSPNAGWPEAAMAGALGLRLSGPRIYGGRVAEEPWLNGAGRDPVAAD
                     IARALAICRRALWLGAGLLTLLSAI"
     gene            complement(1326..1865)
                     /locus_tag="EYO87_15495"
     CDS             complement(1326..1865)
                     /locus_tag="EYO87_15495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018633431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HIC67370.1"
                     /translation="MATLMILRHAPPMTGGKLAGRSDVDADCSDTAAFAWMRARLGTP
                     AAVLSSPARRCRQTAHALGLSPRFMAALWEQDYGAWEGLDYARLPDLGPLTPAELSRH
                     RPDGGESFQDMAARVLPKLKALDEDTLIVGHAGTVRAGLSLVVGHAALSFHVAPLSLT
                     ILRRSGGDWSVEAVNITPP"
     gene            2031..3191
                     /locus_tag="EYO87_15500"
     CDS             2031..3191
                     /locus_tag="EYO87_15500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010396278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isovaleryl-CoA dehydrogenase"
                     /protein_id="HIC67371.1"
                     /translation="MFTQGMEFDLGEDVNALRDMVHRWAQDRVRPLAAATDRDNAFPS
                     DLWTEMGDLGLLGITVPEEWGGAGLGYLAHVVAVEEIARASASISLSYGAHSNLCVNQ
                     IKLNGSDDQRAKYLPALCSGRAVGALAMSEEGAGSDVVGMKLRAEKKNDRYVLNGNKY
                     WITNAPDAQILVVYAKTDPDAGSRGITAFIVERGMKGFDTGPHFDKLGMRGSNTGELI
                     FEDCEIPFENVLGEEGRGVRVLMSGLDYERLVLSGIGTGIMAACLDEVMPYVKERRQF
                     GQPIGSFQLMQGKIADMYVALNTARAYVYEVAKACDSGRVTRQDAAGAVLYASEQAMA
                     QAHQAVQALGGAGFLNDSTVSRLFRDAKLMEIGAGTSEIRRMLIGRELMALA"
     gene            3250..3732
                     /locus_tag="EYO87_15505"
     CDS             3250..3732
                     /locus_tag="EYO87_15505"
                     /inference="COORDINATES: protein motif:HMM:PF07007.10"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1311 domain-containing protein"
                     /protein_id="HIC67372.1"
                     /translation="MKNLPAILSCLLLPSLLVPAPLLAQEARIDTAVVAACFDATEPG
                     DIQPDCIGKAATACSKAHEQPETTLAISQCMMAENTAWDDLLNREYKKTRSQMSDQPG
                     LADTLLAAQRAWIAFRDAECTLAYDRYGGGSMRVIAAADCQMRQTARRTFELRDMQGF
                     "
     gene            3734..>4206
                     /locus_tag="EYO87_15510"
     CDS             3734..>4206
                     /locus_tag="EYO87_15510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013067236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylcrotonoyl-CoA carboxylase"
                     /protein_id="HIC67373.1"
                     /translation="MKLKSAALTGSDAFRANREAHLALLSDVRQAAEAAAAGGGDKAM
                     QRHVDRGKMPPRERVANLLDPGSPFLEIAAMAAHGLYDGAAPGAGVIAGIGRVQGQDV
                     MVVANDATVKGGTYYPMSVKKHLRAQEIAEECHLPCLYLVDSGGANLPNQDEVFP"
BASE COUNT          692 a         1401 c         1456 g          657 t
ORIGIN      
        1 ggccggacat gttctggggc ctcgtggtca gcttcggtat cggcaacctg atcctgctgg
       61 tgctgaacct gccgctgatc gggatctggg tttcgatgct gcggatcccg ttccgctggc
      121 tttatccggc catcgtggtc ttcgtctgcc ttggggtcta ttcggtgcgc ggatcgagct
      181 tcgacatcgc cgccgtcgcg gtgatcgggg cgatcggcta tctgctggcc atggcgcgat
      241 tcaacccggc cctgctgctg ctgggcttcg tcctcggccc gctgatcgag accaatctgc
      301 gccgcgccat gctgatcggg cgcggcgatc cgatggtgtt cctgcaacgc ccgatctcgg
      361 ccgtcttcgt ggtggcgacg gtggcgctga tcgcagcctc gctgtggggc gcgtggaggc
      421 ggttcagatc gcggacagca gcgtaagcag ccccgccccc agccacagcg cgcggcggca
      481 gatcgccagc gcccgtgcga tatcggccgc gaccggatcg cgtcccgcgc cgttcagcca
      541 gggttcctcc gcaacccggc cgccatagat gcgtggcccc gatagccgca ggccaagcgc
      601 gccggccatc gccgcctcgg gccagcccgc attgggcgaa cgatgcgcgc gcgcatcgcg
      661 ccgtgccgtc cgccacgccg tgccgccggc cacgcaggtg aacaacagcg ccgtcaggcg
      721 cgccggcgcc cagttggccg catcgtccag ccgcgcggcg aagcgcccga attcggcatg
      781 gcgcggcgtc cggtgcccga tcatcgaatc cagcgtgttg atcgccttgt aggccgcgat
      841 ccccggcagc ccggcaacag ccgcccagaa cagcggagcc accaccccgt ccgaggcgtt
      901 ttcggccagg ctttcgatac tggcgcgggc cagggcgggt gcgtcggcgc ggctcacgtc
      961 gcggccgacg atcttcgcgg tggcgcggcg cgcgccctga agatcgcctg cggccagggg
     1021 ccgcgcgaca gcacgaagat gatggtgcag ggatcgcgcc gcgaccagcg gccaggcaag
     1081 gaggcccgca acgaggggcc ccagcaggcc ttgcaggatc agcgccggga tgacggcggc
     1141 cgcgatcacc accagcgccg ccgcggcgcc ccgcgccatc cccgcgcggc cccggttcca
     1201 gcgccggtcc agcgccgcga tcagccggcc cagccagctt accggatgac cgatgcggcg
     1261 gaacagggcg tcgggccatc cgattgccac atccagcgcc agcgcggtca gggcgatcag
     1321 cggagtcatg gcggggtgat gttgacggcc tcgaccgacc agtccccgcc ggaccggcgc
     1381 aggatcgtca gcgacagcgg ggcgacatgg aacgacagcg ccgcatggcc caccaccagc
     1441 gacagcccgg cccgcacggt cccggcgtga ccgacgatca gcgtgtcctc gtccagcgcc
     1501 ttcagctttg gcaggacgcg ggcagccatg tcctgaaagc tctcgccgcc gtcgggccgg
     1561 tggcgggaca gttcggcagg cgtcagcggc cccagatcag gcaggcgggc atagtccagc
     1621 ccctcccatg cgccgtaatc ctgttcccac agcgccgcca tgaaccgggg gctcaggcca
     1681 agcgcatgtg ccgtctgccg gcatcgtcgc gccgggctgg acagcaccgc ggccggcgtg
     1741 ccgagacggg cgcgcatcca cgcgaatgcc gccgtgtccg aacaatcggc gtccacgtcg
     1801 ctgcgaccgg ccagcttgcc acctgtcatc ggcggcgcat gacgcaggat catcaatgtc
     1861 gccatcggcc cctcgtccgg ctttgcggcg caccatgtcg cctgcgcgtg gcaagggcaa
     1921 gccgtcccgg ttgacccgtc gcgtcttccg gcgcaggctt gttgacgggc agggggccgt
     1981 ggcttagaac gccacgaaat gaacacctgt tcaataatgg gagagggccg atgttcacgc
     2041 agggcatgga gttcgatctg ggcgaggacg tgaacgccct gcgcgacatg gttcatcgct
     2101 gggcgcagga tcgcgtcagg ccgctggcgg ccgccacaga ccgcgacaat gcctttccca
     2161 gcgacctgtg gaccgagatg ggggatctgg gcctgctggg catcaccgtg cccgaagaat
     2221 ggggcggcgc cgggctgggc tatctggccc atgtcgtggc ggtcgaagaa atcgcccgcg
     2281 cctcggcctc gatcagcctg tcctacggcg cccattccaa cctctgcgtg aaccagatca
     2341 agctgaatgg cagcgacgat cagcgcgcga aatacctgcc cgccctgtgc agcggcaggg
     2401 ccgtgggcgc gctggccatg tccgaggagg gcgcgggcag cgatgtcgtc gggatgaagc
     2461 tgcgggccga gaagaagaac gaccgctatg tgctgaacgg caacaagtac tggatcacca
     2521 acgcgcccga tgcgcaaatt ctggtggtct atgccaagac cgacccggat gcgggcagcc
     2581 gtggcatcac cgccttcatc gtcgagcggg ggatgaaggg atttgacacc ggaccgcatt
     2641 tcgacaagct gggaatgcgc ggctcgaaca ccggcgaact gatcttcgag gattgcgaga
     2701 tccctttcga gaatgtgctg ggagaggaag gccggggcgt gcgcgtgctg atgtcggggc
     2761 tggactatga acgtcttgtc ctgtccggca tcggcaccgg gatcatggcg gcctgtctgg
     2821 acgaggtgat gccctatgtg aaagagcgcc ggcaattcgg ccagcccatc ggttccttcc
     2881 agctgatgca gggcaagatc gccgatatgt atgtcgcgct gaataccgcg cgtgcctatg
     2941 tctacgaggt cgcgaaagcc tgcgattcgg gccgggtcac gcggcaggac gcggccggcg
     3001 ccgtgcttta cgccagcgaa caggcgatgg cgcaggcgca tcaggcggtg caggcgcttg
     3061 gcggggcggg atttctcaac gacagcaccg tcagccgcct gttccgcgac gccaagctga
     3121 tggagatcgg tgccggcacc agcgagatcc gccggatgct gatcggccgc gaattgatgg
     3181 cactggcatg aggggcgcga ggcccgttcc ggggatggcc tgccggagcg acgggacgcg
     3241 ggagggacca tgaagaactt gcctgcaatt ctttcgtgtc tgctgctgcc aagtctgctt
     3301 gttccggcgc ccctgctggc gcaggaggcc aggatcgaca cggccgtggt cgcggcctgt
     3361 ttcgacgcca ccgaacccgg cgacatccag cccgactgca tcggcaaggc cgcgacggcc
     3421 tgttcgaaag cccatgaaca gcccgagacg acgctggcca tcagccagtg catgatggcc
     3481 gagaacaccg cctgggacga tcttctgaat cgcgaataca agaagacccg ctcgcagatg
     3541 agcgaccagc ccggcctggc cgatacgctg ctggcggcgc aaagggcctg gattgcgttt
     3601 cgcgacgccg agtgcacgct ggcctatgat cgatatggcg gcggctcgat gcgggtgatc
     3661 gcggcggccg attgccagat gcgtcaaacc gcgcgccgca ccttcgagtt gcgcgacatg
     3721 cagggattct aggatgaagc tgaaatccgc agccctgacc ggatcggatg ccttccgcgc
     3781 caatcgcgag gcgcatctgg cgctgttgtc cgatgtccgc caggccgccg aggctgccgc
     3841 cgcagggggt ggcgacaagg cgatgcagcg tcacgtcgat cgcggcaaga tgccgccgcg
     3901 cgagcgggtg gcgaacctgc tggatccggg atctccgttt ctggagatcg ccgccatggc
     3961 cgcgcatgga ttatatgacg gcgcggcccc cggcgccggc gtgatcgcgg gcatcggccg
     4021 cgtccagggg caggacgtga tggtggtggc caatgacgcg accgtcaagg gcggcaccta
     4081 ttacccgatg agcgtgaaga aacaccttcg cgcccaggaa atcgccgagg aatgtcatct
     4141 gccatgcctc tatctcgtcg attcgggcgg tgccaacctg cccaaccagg acgaggtctt
     4201 tcccga
//
LOCUS       DTVW01001173            2770 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2425951, whole
            genome shotgun sequence.
ACCESSION   DTVW01001173 DTVW01000000
VERSION     DTVW01001173.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2770)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2770)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2770
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2425951"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1167
                     /gene="serA"
                     /locus_tag="EYO87_15515"
     CDS             <1..1167
                     /gene="serA"
                     /locus_tag="EYO87_15515"
                     /EC_number="1.1.1.95"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_354433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate dehydrogenase"
                     /protein_id="HIC67374.1"
                     /translation="NKTLGVIGAGNIGSIVIDRALGLHMKVLAYDPFLSEERATEIGV
                     TKVDLDDLLGRSDFITFHVPLTDKTRNILSRDAIGKLKKGVRIINCARGGLVDEEALA
                     EALKDGRVAGAAFDVFAVEPATESPLFNLPNVVVTPHLGASTTEAQENVALQVAEQMS
                     DYLLTGAVQNALNMPSVTAEEATVMGPWIRLAAHLGAFVGQMTDEPIKAINVLYDGAV
                     ASMNLNALNASAIAGVMKATNPDVNPVSAPVIAKERGIRVSTTRQDKGGVFEGYVKLT
                     VVTEQRERSIAGTVFSDGKPRFIQIRGINIDAEIGEHMLYTRNKDVPGVIGALGMTLG
                     DLGVNIANFTLGRSTGGEDAIAILYLDEPISDQALAALHKTGKFLQARRLHFEV"
     gene            1240..1971
                     /locus_tag="EYO87_15520"
     CDS             1240..1971
                     /locus_tag="EYO87_15520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010395615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine protein phosphatase"
                     /protein_id="HIC67375.1"
                     /translation="MTLYVVGDIHGHPELLRAAHERIFSDGGKHALIAHVGDLVDRGP
                     DSRGAVEYLMRGRDAGRNWVVTRGNHDRFLPIFLSDPAWVDPGLASGRTWIAHSGLGA
                     AATLASYGVDPTLSGDRLLTEARRAVPDAHARFLSSLPLWFLHPEALVVHAGIRPGID
                     LQDQAEQDLVWIRKDFLDSDADHGPLIVHGHTAIDTATHYGNRLNIDGGAAYGRPLCA
                     VAIEAGQVHLLTDDGRVPLLPQAAS"
     gene            1968..2438
                     /locus_tag="EYO87_15525"
     CDS             1968..2438
                     /locus_tag="EYO87_15525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007426169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CREA protein"
                     /protein_id="HIC67376.1"
                     /translation="MIARLLALSLLIPAATAAEEIGKIGVDWIGNDIVIEAIRDPEVG
                     GVTCHLAYFDRSMLDRLSQGNWFEDPSNSAIECARTGPIDLSGIQRGKGGEDVFREGR
                     SLVFKSLRVKRIYDEENRVLIYLAHANELTDGSAKMAISTVPLLDEDRDPLPPE"
     gene            2575..>2770
                     /gene="hspQ"
                     /locus_tag="EYO87_15530"
     CDS             2575..>2770
                     /gene="hspQ"
                     /locus_tag="EYO87_15530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009463428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heat shock protein HspQ"
                     /protein_id="HIC67377.1"
                     /translation="MQSYHRVAKFGLGQVVRHRHRPFRGVIFDVDPEFANTQEWYDSI
                     PEDARPAKNQPFYHLYAETEA"
BASE COUNT          499 a          871 c          911 g          489 t
ORIGIN      
        1 aacaagaccc tgggcgtgat cggcgcgggc aatatcgggt ccatcgtcat cgatcgcgcg
       61 cttgggctgc acatgaaggt gctggcctat gacccctttc tgtccgagga acgcgcgacc
      121 gagatcggcg tgaccaaggt cgatctggac gatcttctgg gcaggtcgga tttcatcacc
      181 tttcacgtgc cactgaccga caagaccagg aacatcctgt cgcgagacgc catcggcaag
      241 ctgaagaagg gcgtccggat catcaattgc gcgcgcggcg ggctggtcga tgaagaggcg
      301 ctggccgaag cgttgaagga cggccgcgtg gccggtgcgg ccttcgacgt cttcgcggtc
      361 gagcccgcca ccgaaagccc gctgttcaac ctgcccaatg tcgtcgtgac cccgcatctg
      421 ggtgcatcga ccaccgaggc gcaggaaaac gtggcgctgc aggtggccga acagatgtcg
      481 gactacctgt tgaccggggc ggtgcagaac gcgctgaaca tgccttcggt caccgccgag
      541 gaggccaccg tgatgggccc gtggatcagg ctggccgccc atctgggcgc cttcgtgggc
      601 cagatgacgg atgagccgat caaggcgatc aacgtgcttt atgacggggc ggtggcctcg
      661 atgaacctga acgcgctgaa cgcttcggct atcgccgggg tgatgaaggc caccaatccg
      721 gacgtgaatc cggtctcggc cccggtgatc gcgaaggagc gcggcatccg ggtctcgacc
      781 acgcggcagg acaagggcgg cgttttcgag ggctatgtca agctgaccgt cgtcaccgag
      841 cagcgcgagc gatcgatcgc aggcaccgtc ttcagcgacg gaaagccgcg cttcatccag
      901 atccgcggca tcaacatcga tgccgagatc ggcgaacaca tgctatatac ccgcaacaag
      961 gacgtgccgg gcgtcatcgg cgcgcttggc atgacgctgg gcgatctggg ggtcaacatc
     1021 gccaatttca cgctgggacg ttcgaccggg ggcgaggatg cgatcgcgat cctgtatctg
     1081 gacgaaccga tcagcgacca ggccctggcg gccctgcata agaccggcaa gttcctgcag
     1141 gcccgccgtt tgcatttcga ggtctgaacc ttgcgccgcg cgcccttgac gggcgcgcgg
     1201 cgatctgacc ggatgcagga acaaggaacg cccgccgcca tgacccttta cgtcgtcgga
     1261 gacattcacg gccacccgga gctgctgcgc gccgcgcatg aacggatttt cagcgatggc
     1321 ggcaagcacg cgctgatcgc ccatgtcggc gacctggtcg atcggggccc ggattcgcgc
     1381 ggcgcggtgg aatatctgat gcgggggcgc gacgcgggac gcaactgggt ggtcacgcgc
     1441 ggcaatcacg accgcttcct gccgatcttc ctgtccgatc ccgcctgggt cgatccgggg
     1501 ctggcctcgg gccggacctg gatcgcgcat agcgggctgg gcgcggccgc gacgctggca
     1561 tcctatggcg tcgatccgac gctttccggc gaccggttgc tgaccgaggc acgccgcgcg
     1621 gtgcccgatg cgcacgcccg attcctgtcc tcgctgccct tgtggttcct gcatcccgag
     1681 gcactggtcg tccatgccgg catccgaccg ggcatcgatc ttcaggatca ggccgaacag
     1741 gatctggtct ggatccgcaa ggattttctg gacagcgacg ctgatcacgg gccgttgatc
     1801 gtgcatggcc ataccgccat cgacacggca acccattacg gaaatcgcct gaatatcgac
     1861 ggcggcgcgg cctatggtcg gccgctttgc gcggtcgcga tcgaggccgg gcaggtgcat
     1921 cttctgaccg acgacggccg ggtgccgctg ctgccgcagg ccgcgtcatg atcgcgcgcc
     1981 tgcttgccct gtcactgctg atccccgcgg ccacggccgc ggaggagatc ggcaagatcg
     2041 gcgtggactg gatcggcaac gatatcgtga tcgaggcgat ccgcgatccc gaggttggcg
     2101 gcgtcacctg ccatctggcc tatttcgacc gttcgatgct ggaccggctg agccagggca
     2161 actggttcga ggatccctcg aacagcgcca tcgaatgcgc gcggacagga cccatcgacc
     2221 tgagcgggat ccagcgcgga aagggcggcg aggatgtgtt ccgcgagggc cgctcgctgg
     2281 ttttcaagtc cttgcgcgtc aagcggatct atgacgagga gaaccgcgtg ctgatctacc
     2341 tggcccacgc caatgaactg accgatggtt cggcaaaaat ggcgatctcg accgtgccgc
     2401 tgctggacga ggatcgggat ccgttgccgc cggaataggc agggcgccgg cgtttctgcc
     2461 cggtcttgcc ttcggatcat gcaaatgctg ccgatccggt ggacagaatc gcccgacggg
     2521 attagaaggc gcgacatccg ctctctgccg gcaggaacat ggaaggcgac agccatgcag
     2581 tcatatcacc gcgtcgcgaa attcggtttg ggccaggttg tccgccatcg tcatcgtccg
     2641 tttcgcggcg tcatcttcga cgtcgatccc gaattcgcca atacgcagga atggtatgat
     2701 tccattcccg aagatgcgcg gccggccaag aaccagccct tctatcacct ttatgccgaa
     2761 accgaggcaa
//
LOCUS       DTVW01001174            1956 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2427136, whole
            genome shotgun sequence.
ACCESSION   DTVW01001174 DTVW01000000
VERSION     DTVW01001174.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1956)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1956)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1956
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2427136"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..817
                     /gene="moeB"
                     /locus_tag="EYO87_15535"
     CDS             <1..817
                     /gene="moeB"
                     /locus_tag="EYO87_15535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="molybdopterin-synthase adenylyltransferase MoeB"
                     /protein_id="HIC67378.1"
                     /translation="PLDAPAPLDAPAPLNAPAPDDDIGDAELERYARHIVLREIGGPG
                     QMRLRAARVLVVGAGGLGAPVCLYLAAAGVGRITLADDDRVSLSNLQRQVIFRSDQRG
                     QGKVQAAAAAMTALNPHVAVTPLPRRITQEDTTLFADHDLIVDGTDSFAAREAINRAA
                     TAARIPLVSGAIAQWEGQVTLYDPARGGPCLTCLFPAAPAPGLAPACAEAGVVGALPG
                     VIGSLMALEAIKAITGAGDALRGRMLIFDGLHGETRTIRTARRKDCPVCKDAR"
     gene            complement(876..1223)
                     /locus_tag="EYO87_15540"
     CDS             complement(876..1223)
                     /locus_tag="EYO87_15540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006939528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HIC67379.1"
                     /translation="MIAVIFEVEPRGDAERADYLDIAAAMRSLVEEIDGFISVERFQS
                     LTNPGKMLSLSFFRDEAAIEQWRKLARHRAAQEAGRHRLFADYRLRIAHVIRDYGMNA
                     RDQAPEDSRAANG"
     gene            1329..>1956
                     /locus_tag="EYO87_15545"
     CDS             1329..>1956
                     /locus_tag="EYO87_15545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase M3"
                     /protein_id="HIC67380.1"
                     /translation="MNPELTRWTGPQGLPRFDLIGDSDFAPAFDRELAAASAAMEAIA
                     ANPDPADFANTVAAMETAEDGLNRLLSIFYTLSSTDSNPAREALQRDFAPRLAAYNSR
                     TSMDPRLYARVSTVAASAQDLAPEDRRITELALRDLTRSGAGLQGADRDRMAAIRARM
                     AVLTTDFSQNVLADERDYVLPVPDHGLGGLPDWLVRAMRAAARERGLAG"
BASE COUNT          288 a          692 c          664 g          312 t
ORIGIN      
        1 ccccttggac gcccccgccc ccttggacgc ccccgccccc ttgaacgccc ccgccccgga
       61 cgacgatatc ggcgacgccg agcttgaacg ctatgcccgc cacatcgtcc tgcgcgagat
      121 cggcgggccg ggtcagatgc ggctgcgtgc ggcgcgggtg ctggtcgtcg gtgcgggcgg
      181 attgggcgcg ccggtctgtc tttatctcgc ggcggcgggc gtggggcgga tcacgctggc
      241 cgatgatgat cgcgtcagcc tgtcgaacct gcaacgccag gtgatctttc gcagcgatca
      301 gcgcgggcag ggcaaggtgc aggccgccgc cgcagccatg acggcactga acccgcatgt
      361 cgccgtcacg ccgctgccgc gccgcatcac gcaagaagac accacccttt tcgcggacca
      421 tgacctgatc gtcgacggca ccgacagctt cgccgcgcgc gaggcgatca accgggccgc
      481 gaccgctgcg cggatcccgc tggtctcggg cgccatcgcg caatgggaag gccaggtcac
      541 gctttacgat cccgcgcgcg gcggcccctg cctgacctgc cttttccccg cagcacccgc
      601 gcccggactt gcccccgcct gcgccgaggc cggcgtggtc ggcgcgctgc ccggcgtgat
      661 cggcagcctg atggcgctgg aggcgatcaa ggccatcacc ggtgcgggcg atgcgctgcg
      721 cggccggatg ctgatcttcg acggacttca tggcgagacc cggacgatcc gcacggcgcg
      781 ccgcaaggat tgcccggtct gcaaggatgc gcgctgagat ttcggtgcga tccgggccgt
      841 cccggcgccg gaatcgcggc ggcccggcca gacccctatc cgttcgcggc ccggctgtcc
      901 tctggcgcct ggtcgcgcgc gttcatgccg taatctcgga tcacatgcgc gatccgcagc
      961 cgataatcgg cgaacagcct gtgtctgccg gcctcttgcg cggcgcgatg ccgcgcaagc
     1021 ttgcgccatt gctcgatcgc cgcctcgtcg cggaagaatg acagcgacag catcttgccc
     1081 ggattggtca ggctctggaa acgttcgacc gagatgaagc cgtcgatctc ctcgaccagc
     1141 gatcgcatcg cggcggcgat gtccagataa tcggcgcgtt cagcatcgcc cctgggttcg
     1201 acctcgaaga tgacggcgat catggcggac tcctgcctgg ggttgcaggg cagcataggc
     1261 cggctggcgc gggtctggaa gtccggcggt ccctgaccta gggttcgctc cagcacagga
     1321 ggtccgcgat gaatcccgaa ctgacccgct ggacaggccc ccagggcttg ccgcgtttcg
     1381 acctgatcgg ggattccgat ttcgctccgg ccttcgaccg cgaactggcc gccgccagcg
     1441 cggcgatgga ggcgatcgcg gccaatcccg atcccgccga tttcgccaat accgtcgccg
     1501 cgatggagac ggcggaagat gggctaaacc ggctactgtc catcttctac acgctttcct
     1561 cgacagattc gaaccccgcg cgagaggcgc tgcaacgcga tttcgcaccg cgtctggccg
     1621 cgtataacag ccgcaccagc atggatccgc gcctctatgc gcgggtcagc accgtggccg
     1681 cgagcgcgca ggatctggcc cccgaggacc ggcgcatcac cgaactggcc ttgcgcgacc
     1741 tgacccggtc tggtgccggg ctgcagggcg cggaccgcga ccggatggcg gcgatccggg
     1801 cgcggatggc ggtgctgacg acggattttt cccagaatgt gctggccgac gaacgcgact
     1861 acgtgctgcc ggtgcccgat cacggccttg gcggtctgcc ggactggctg gtccgggcaa
     1921 tgcgcgcggc agccagagag cgcggccttg ccgggc
//
LOCUS       DTVW01001175            1343 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2427382, whole
            genome shotgun sequence.
ACCESSION   DTVW01001175 DTVW01000000
VERSION     DTVW01001175.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1343)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1343)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1343
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2427382"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            182..>1343
                     /locus_tag="EYO87_15550"
     CDS             182..>1343
                     /locus_tag="EYO87_15550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010399956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I poly(R)-hydroxyalkanoic acid synthase"
                     /protein_id="HIC67381.1"
                     /translation="MASNRGSTGKDVTQRKGIRATSGKTGTSKGSADAKETRKPAAAE
                     PRKRAKSADAATAKSVAAARPATARKAAKPAASSKDQPRKTAKASPAEARLEDAASTR
                     SSEAGATPRSPGAMPPPPGATPEKMLEALAMGVDAPNAQRLAENIERIEALGNRLMNA
                     FSGRSLPNPGVEAPGPDLLLTAANAWMKSWTEQPARVIEQQVNYWGETLKHYAKANIA
                     LASGNLSAPEDDSPADKRFANPLWRSHPYFNFFKRQYQINASAMREAADRLDMPDQVA
                     RRRIGWLTDQIIDMMAPTNFLATNPDALEKAVETEGESLVKGLENLVRDVEMNGGEMV
                     VSLADRDAFTVGENIGTAEGRVVHRTPLLELIQYTPTTDKVHEIPLLIFPPWI"
BASE COUNT          265 a          435 c          438 g          205 t
ORIGIN      
        1 tctccatcgc gtcgtaggat acgacgccct tcagtccctt ggtcggcatg ttagccaccc
       61 ttttctgcgt tgcggcgcag tgcgggcccg gccgaggtcg gctgaggctc tgatctggcg
      121 gctttacgct gtgcctgcgc tgcgcgtatc attaccctct ttctaggggg gatgtcgtct
      181 catggcaagc aacagaggct cgacgggcaa agatgttacg caacggaagg gcattcgggc
      241 aacatctgga aagaccggca cgtcgaaggg ttcggcggat gcgaaggaga caaggaagcc
      301 tgccgccgcg gaaccgcgca aacgggccaa gtccgccgat gccgcgactg cgaaatcggt
      361 ggcggcggca cggcccgcaa ccgcccgcaa ggccgcaaag ccggccgctt cgtcgaaaga
      421 ccaaccgcgc aagaccgcga aagccagccc ggccgaggcc cggctggagg acgcggcctc
      481 gacccgttcg agcgaggcag gggccacgcc ccgatccccc ggcgccatgc cgccgccccc
      541 tggcgccacg cccgaaaaga tgctcgaggc gctggccatg ggcgtcgatg cacccaacgc
      601 gcagcggctg gccgagaata tcgagcggat cgaggctttg ggaaaccggc tgatgaacgc
      661 cttttcgggc cgcagcctgc ccaatcctgg cgtcgaggcg ccgggccccg atctgctgct
      721 gaccgccgcc aacgcctgga tgaagtcatg gacggaacag cccgcgcggg tgatcgaaca
      781 gcaggtgaat tactggggcg agacgctgaa acactatgcc aaggccaata tcgcgctggc
      841 cagtggcaat ctgagcgcgc ccgaggatga cagccccgcc gacaagcgtt tcgccaatcc
      901 gctgtggcgc agtcatccct atttcaactt cttcaagcgt cagtatcaga tcaatgccag
      961 cgccatgcgc gaggcggcgg acaggctgga catgcccgat caggtggcac ggcggcgcat
     1021 cggctggctg accgaccaga tcatcgacat gatggcgccg acgaatttcc tggccaccaa
     1081 tcccgacgca ctggaaaagg ccgtcgagac cgagggcgaa agccttgtga agggcctgga
     1141 gaacctggtg cgcgacgtcg agatgaacgg tggcgagatg gtcgtctcgc tggccgatcg
     1201 cgatgccttc accgtcggcg agaatatcgg caccgccgaa ggtcgcgtgg tgcatcggac
     1261 gccgctgctg gaactgatcc agtacacccc gacgaccgac aaggtgcacg agatcccgct
     1321 gctgatcttt ccgccctgga tca
//
LOCUS       DTVW01001176            1275 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2427445, whole
            genome shotgun sequence.
ACCESSION   DTVW01001176 DTVW01000000
VERSION     DTVW01001176.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1275)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1275)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1275
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2427445"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            282..842
                     /locus_tag="EYO87_15555"
     CDS             282..842
                     /locus_tag="EYO87_15555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67382.1"
                     /translation="MAAIRFSRMRGLGRVQWIAAAAALSAVAIYLLVLRQLDHRAAAY
                     LEGLRETDPTTYLTDLREVRGYDAFLTEYARLEGFDEFRPQPPGFLIGRWTMRDDMLR
                     LTRGQAPKSCTDPATFEYGLFISARAEIVSLPVAYRLSGSTVEMRMAGDRTLPIRLIA
                     YGARLDHLEFTPPGETRPVHAYLCGR"
BASE COUNT          208 a          419 c          436 g          212 t
ORIGIN      
        1 agcaggatcg cgcccaggcc cgtgacgatg ccgatgccga tggccagaaa ggaaagcgaa
       61 atcaacgaga cattgcgggt gtcgttgttc agtccgggca ggtcggtcgt ggcggtatcg
      121 gtcatggctc tcggtggcgg ttgtggtcgc ggccggcgac ctgtaggaat gccgcgggcc
      181 gggtccgggc cattcgcagc gccttctctg ctatgccttt gcctgcccgg atgcaaaccg
      241 taagcagcat ccggcccgcg aagcagtgga agggacagga catggccgcg atcagattca
      301 gccggatgcg cggacttggc cgtgtccagt ggatcgccgc cgcagccgcc ctgtcggccg
      361 tcgcgatcta tctgctggtg ctgcggcaac tggatcaccg cgccgcggcc tatctggagg
      421 ggctgcgcga gaccgatccg acaacctatc tgaccgatct tcgcgaggtt cggggatatg
      481 acgcctttct gaccgaatat gcgcgtctgg aagggttcga cgaatttcgc ccgcagccgc
      541 ccggcttcct gatcggtcgc tggaccatgc gcgacgacat gctgagactg acccgcgggc
      601 aggcgccgaa atcctgcacc gacccggcca ccttcgaata cgggcttttc atcagcgcgc
      661 gcgccgaaat cgtatccctg cccgtcgcat atcgcctgtc gggaagcacg gtcgagatgc
      721 ggatggccgg ggatcggacg ctgccgatcc ggctgatcgc ctatggcgcg cggctggacc
      781 atctggagtt cacgccgccg ggcgagaccc ggccggttca tgcctatctc tgcggacgct
      841 gaccctcacg gatccgcaag catgcgcggc aggctctggc gcagcagcgt catgccgccg
      901 ggccgccagc ccatcgccgc cagggccgcg caatccggca cgttcagcaa cgacgcatcc
      961 gcgcgatggg gcaggggatg gcggctggac gtcagatccc gcacctcggc cagcagatcg
     1021 cggcggtcaa ggaccagatc ggacgcattg acgctggcgg gtggggtctc ttgtgtcaga
     1081 agcagcagca tcgcgcaggc cagatcccgg ccgtgcaatt cggtcgcgac gcgcggcgtg
     1141 attgcgcgac ctgccagata gtcgcggatc agtccgcgcc atttctgcgc cgggccgggc
     1201 ccatagatgc ctgtcgcccg gatcgaggtc gcccgaagct gcggtctcag ccggcgcaga
     1261 tgcgcctcgg ccagc
//
LOCUS       DTVW01001177            1075 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2427773, whole
            genome shotgun sequence.
ACCESSION   DTVW01001177 DTVW01000000
VERSION     DTVW01001177.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1075)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1075)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1075
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2427773"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..359)
                     /locus_tag="EYO87_15560"
     CDS             complement(<1..359)
                     /locus_tag="EYO87_15560"
                     /inference="COORDINATES: protein motif:HMM:PF09339.8"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IclR family transcriptional regulator"
                     /protein_id="HIC67383.1"
                     /translation="MYVNKEVKSAGRVLDLIAYLANCREPVGLARVSRDMSLPGSSLH
                     ALLHTLVARGHVHQGTDGRFVLVEESRHGFPFRRNENALVHAAMPVMMRLRDHSDETV
                     ILSILTAGGEIRRLSKVV"
     gene            458..>1075
                     /locus_tag="EYO87_15565"
     CDS             458..>1075
                     /locus_tag="EYO87_15565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009492491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase"
                     /protein_id="HIC67384.1"
                     /translation="MAGDSTDPWTWPEETWRRKAGQAAAGRSLRPETWKDGATWAVAL
                     SFDSDHETFELRNGGNSVGRMSQGAYGARRGIERILRVLDRASVPASFFMPAVAGLLH
                     PDEVQAVTGAGHEMAIHSWIHEMNSRLDHATERELSLRAADALERLTGTRPVGMRTAS
                     WDFSPHTLSIIREMGLLYDSSLMADDDPYEILDGDEATGIVEVPVE"
BASE COUNT          207 a          327 c          354 g          187 t
ORIGIN      
        1 acgactttcg acagccgcct gatttcgccg cccgccgtca ggatcgacag gatcaccgtc
       61 tcgtcgctgt gatcgcgcag tcgcatcatc acgggcatcg ctgcatggac aagcgcgttc
      121 tcgttgcggc gaaacggaaa accgtgccgg ctttcctcga ccagaacgaa ccggccgtcg
      181 gtgccctgat ggacatgacc gcgcgcgaca agcgtgtgaa gaagtgcgtg caagctgctg
      241 ccgggcagcg acatgtcacg cgaaacccgt gccaggccga caggctcccg gcaatttgcg
      301 agataggcga tgaggtccag gacccgaccg gcgcttttca cttccttatt cacatacatg
      361 aatgaaaccg cgatttagcc gcttgtccag atcccagtcg gggctagggt cgaagtcagg
      421 atgaatgcgc cgaagcgccc tgtgacggga gatggcaatg gccggagatt cgaccgatcc
      481 ctggacctgg cccgaggaaa cctggcgccg gaaggcaggt caggcggccg ccgggcggtc
      541 actgcggccc gaaacgtgga aagacggcgc gacatgggcc gtcgcattgt ctttcgacag
      601 cgatcacgag acgttcgaat tgcgcaacgg cggaaattcg gtcggtcgca tgtcgcaggg
      661 cgcctatggc gcaaggcgag gcatcgaacg gatcctgcgc gtgctggatc gggcctcggt
      721 cccggcatcc ttcttcatgc cggccgttgc cggcctgctg catcccgacg aggtgcaggc
      781 agtcaccggt gccgggcacg aaatggcgat ccacagctgg atccacgaga tgaactcccg
      841 actcgatcat gcgaccgagc gagagctgtc gctgcgcgcg gccgacgcgc tggaacggct
      901 gacgggaacg cggcctgtcg gaatgcggac ggcgtcgtgg gatttcagtc cccataccct
      961 gtcgatcatc cgcgagatgg gtttgctcta tgattcctcg ctgatggccg atgacgaccc
     1021 ctacgagatc ctggatggcg atgaggcgac cgggatcgtc gaggttccgg tggaa
//
LOCUS       DTVW01001178            1131 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2428133, whole
            genome shotgun sequence.
ACCESSION   DTVW01001178 DTVW01000000
VERSION     DTVW01001178.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1131)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1131)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1131
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2428133"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(1..324)
                     /locus_tag="EYO87_15570"
                     /pseudo
     CDS             complement(1..324)
                     /locus_tag="EYO87_15570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011907123.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            518..>1131
                     /locus_tag="EYO87_15575"
     CDS             518..>1131
                     /locus_tag="EYO87_15575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008126080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HIC67385.1"
                     /translation="MSRPKGDLSRRLYLSDTILDGDSTIFHAINRGKESIALDLKNIA
                     DLGGAETLISRADVVIQNFRPGVIERLGLAWEDVRKFAPHVVYGSVSGSGPDGPWACY
                     PGQDLLAQARSGVMWLNGDEGQGPVPFGLAVADMFAGANLVQGILAALVRRGMGGTGA
                     HVETSLLESMVDFQFEMLATHLNDGGRPPRRSEYRSAHAGLAAP"
BASE COUNT          194 a          327 c          372 g          238 t
ORIGIN      
        1 atctgtcagg ctctgatgtc cggatcttgc agatgtattc gtatggcgtg agaccgccga
       61 gggtcttgag cctgcgcgcg aagctgtaag ccgccatgaa gtccgtcaga tgtgctcgga
      121 actggtcgtg gctgtcgtca tggaagcgtt tgacgttcgg cggggaaacg atcccccgga
      181 tcttttcctg ttccgcttca ccctccttga tcgtgcggtt catccgctcg acctgacccc
      241 gtttgcaccg cagatcatgt caaagcgcat cggacgggag taaatggtat tcctgttccg
      301 aggctgctct gcgaactgaa tgccgtagca tgttgggaat gatgcgctgt tgaaggtcat
      361 ggccgcctgc gcagccccca aaattgcgca gcaggcggcc ataaccgggc ctcgggcctc
      421 tatgatggtt ttgcgaacca caccacaaag gagaccgcca tggccaaggt tgagcatagt
      481 tcggatgccc gtgtcctggt aggcatcgac cgcatagatg tcgcggccga agggcgatct
      541 gtcgcgcagg ctctatctct ccgacacgat tctcgacggc gacagcacca tctttcacgc
      601 catcaatcgt ggcaaggaaa gcattgcgct ggatctcaag aacatcgccg atctgggggg
      661 cgctgaaacg ctgatctcgc gcgctgatgt ggtgatccag aacttccggc ccggcgtgat
      721 cgaacggctt ggcttggctt gggaggatgt tcgcaaattc gcgccccatg tagtctatgg
      781 ctcggtctcg ggttccggcc cggatggacc ttgggcgtgc tatccggggc aggacctgct
      841 ggcgcaggcg cgctcgggcg tgatgtggct gaacggcgat gaggggcaag gcccggtgcc
      901 tttcgggctg gcggtggcgg atatgttcgc gggggctaat ctggtgcagg gaatcctcgc
      961 cgcgctggtg cgccggggca tgggcggaac gggcgcccat gtcgagacca gcctgctgga
     1021 aagcatggtc gatttccagt tcgagatgct ggccacccat ctcaacgatg gcggccgccc
     1081 gccgcgccgg tcggaatacc gttcggccca tgccgggctg gccgcgcctt a
//
LOCUS       DTVW01001179            1053 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2430709, whole
            genome shotgun sequence.
ACCESSION   DTVW01001179 DTVW01000000
VERSION     DTVW01001179.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1053)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1053)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1053
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2430709"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..535)
                     /locus_tag="EYO87_15580"
     CDS             complement(<1..535)
                     /locus_tag="EYO87_15580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011750101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67386.1"
                     /translation="MKWQGRRGSSNIEDRRSMGATGAGGIGVVGTLVVLAVGYFFGVD
                     ITPVIRQIDQSQNQTQQGRQGSVPLTQEDQRWGDFVSVVLADTEEVWAGILPEQAGMD
                     YRNPTLVLYGGVVQSACGGASAAMGPFYCPNDQKVYLDTDFFNLMAQKMGAGGDFAYA
                     YVIAHEVGHHVQNLVGTL"
     gene            708..>1053
                     /locus_tag="EYO87_15585"
     CDS             708..>1053
                     /locus_tag="EYO87_15585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HIC67387.1"
                     /translation="MLRRLYDWTMGLSAHRHAMTALFGVSFIESSVFPIPPDVLMIPM
                     VLARRSKAMAVALIATAGSVLGAMLGYWIGAALMDSLGQAVLAAYGKQDAYAQLAARF
                     ADYGGWAVLFAAL"
BASE COUNT          165 a          344 c          338 g          206 t
ORIGIN      
        1 acagcgtgcc cacaagattc tgcacgtggt ggccgacctc gtgggcgatc acataggcat
       61 aggcgaaatc gccgcccgcg cccatcttct gcgccatcag attgaagaaa tcggtgtcca
      121 gataaacctt ctggtcgttc gggcaataaa acggccccat tgccgccgag gcgccgccgc
      181 aggccgattg caccacgccc ccgtaaagca cgagggtcgg gttgcggtaa tccatgccgg
      241 cctgttcggg aagaatgccg gcccagacct cttcggtatc ggccagcacg accgaaacga
      301 aatcgcccca gcgttgatcc tcttgcgtca gcggcacgct gccttggcgc ccctgctggg
      361 tttggttctg gctctggtct atctggcgga tcacaggggt gatatcgacg ccgaagaaat
      421 atcccacggc cagcacgacc agcgttccca cgacgccgat gccgccggcc ccggtcgcgc
      481 ccatgctgcg ccgatcctcg atattgctgc tgccgcgcct gccttgccat ttcatccgac
      541 ggtttcctcc gaggatctgc ggtcccttgt gccgaacgcc gcttaccccg cccggttccc
      601 ggctttcgcg ccgtgcggac ggtcgcgggg cacgcgagcg gcgcggaagt gacttgacgc
      661 cgcgcgcccg gcagaggatg caacgtttcg atccgaaggg gaatgcaatg ctgcgcaggc
      721 tatacgactg gaccatgggg ctttcggccc atcgccatgc gatgaccgcc cttttcggcg
      781 tcagtttcat cgaaagctcg gtctttccga ttccgccgga tgtgctgatg atcccgatgg
      841 ttctggcgcg tcgctcgaag gcgatggccg tcgcgctgat cgcgaccgcc gggtcggtgc
      901 tgggcgcgat gctgggctac tggatcggcg cggcgctgat ggacagcctg ggtcaggcgg
      961 ttctggccgc ctatggcaag caggatgcct atgcccagct tgccgcgcgc tttgcggatt
     1021 atggcggctg ggcggtgctg ttcgcggcgc tga
//
LOCUS       DTVW01001180            4699 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2431189, whole
            genome shotgun sequence.
ACCESSION   DTVW01001180 DTVW01000000
VERSION     DTVW01001180.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 4699)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4699)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4699
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2431189"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..147)
                     /locus_tag="EYO87_15590"
     CDS             complement(<1..147)
                     /locus_tag="EYO87_15590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017524780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HIC67388.1"
                     /translation="MDTRCSLRDISIFVAAYEERSFTAAAERENATQSGVSQHMRNLE
                     YMLGV"
     gene            502..1389
                     /locus_tag="EYO87_15595"
     CDS             502..1389
                     /locus_tag="EYO87_15595"
                     /inference="COORDINATES: protein motif:HMM:PF03446.13"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HIC67389.1"
                     /translation="MPHRIGFIGLGVLGNAIARNIVASGSDVLAHDMSMAARKTALAD
                     GLALATDLAEVGGRCDLVFTCLPNGAAMHAVCTELAETGGVGGQLVVDLSTLSIADKE
                     TARDILMRAGRRLLDCPISGNRIMALDRKLTAFCSGERDDYDTVRGTLLTFCRKEHYV
                     GAFGNGSKMKFCGNILNLVHNTVAAEAMVLAIKSGLDPQLFHEVISGSGSSSAMFEVR
                     GKLMAENDYAREGMNFSVPLKDSRIISDHAVSVGMPIPLYQAALQFYHAAAAQGLAHL
                     DAAAVCRVMERNANCERPA"
     gene            1432..2319
                     /locus_tag="EYO87_15600"
     CDS             1432..2319
                     /locus_tag="EYO87_15600"
                     /inference="COORDINATES: protein motif:HMM:PF03547.16"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AEC family transporter"
                     /protein_id="HIC67390.1"
                     /translation="MLPAILAVTAPLFVIIGLGYLWARFKMPFDARTIGALVLQVGTP
                     CLIFSTLTGTGAALSEMGKMVLAAILVIAASSALGALVLRIAGQPLNTYLLVAMHGNS
                     GNMGLPLASMAFGAEGLTLGIVYFTVVAISQNTLGHVVSAGRFDPRAFLRQPVVHASV
                     ITVFVLLSGVTVPGWIARTTELLAGIVIPTMLILLGVSLSRLTVADLKLAAAMSVMRF
                     GVGAVAGVGLILALDLGGAEAGVVWMMATMPAAVVSVIFAERYGHSPEKVAGTIVVST
                     VGTLAGLPLIVWIAMVLAA"
     gene            2342..2935
                     /locus_tag="EYO87_15605"
     CDS             2342..2935
                     /locus_tag="EYO87_15605"
                     /inference="COORDINATES: protein motif:HMM:PF07331.9"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter TctB
                     family protein"
                     /protein_id="HIC67391.1"
                     /translation="MERELARTGGVMARLNFNSAVALAVVALGILIWVLVPYQVAEPP
                     SFFGRSSVGISPKLFPQLIAIGMIFIGACYFYASLSMQQINGFSGLPVSAYVNLAVVL
                     AAMLAYVALLRPLGYVATSMGVATAISFYYGSRNLVGIGLTGIAAPLAIYYLFTRFLS
                     VSLPPFPWGQDSFLFHSQKMMVAARATAERKTFGHLS"
     gene            complement(2866..3635)
                     /locus_tag="EYO87_15610"
                     /pseudo
     CDS             complement(2866..3635)
                     /locus_tag="EYO87_15610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611976.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
     gene            3664..>4699
                     /locus_tag="EYO87_15615"
     CDS             3664..>4699
                     /locus_tag="EYO87_15615"
                     /inference="COORDINATES: protein motif:HMM:PF01970.14"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C4-dicarboxylate ABC transporter permease"
                     /protein_id="HIC67392.1"
                     /translation="MQRADDQWVLTLGMTMFDMLTEATLMLMRLDVLFMISGGLVLGM
                     LVGALPGFTTVMAMAIVLPISFFLEPILGIPFLIGVYKGGIFGGSIPAILVNIPGTGA
                     SMATTLDGPAMTRKGQSRKALEIALVASAVGDFLSSFGTILVIGLIAMIALMIGPPEI
                     SAILLLSLLIIVVSSTGSFLKGMVMLLIGMFLATIGQDPVGAMARFDFGFYPLQAGID
                     LLPLIIGLFAIPEILFAIEHRRASVVDPSHTKAQGEPLRWHELMTCRRTILRSTAIGG
                     FIGMVPGVGQVVAAFMGYSAAQSASSHPETFGKGDIEGVAAPEAANNAVNGPTMVPLL
                     TLGIPGDNITA"
BASE COUNT          773 a         1429 c         1484 g         1013 t
ORIGIN      
        1 cacgccaagc atgtattcca gattccgcat atgctgcgac acgcccgatt gcgtggcgtt
       61 ctcgcgctcg gccgcggcgg tgaaggatcg ttcctcatag gccgcgacga agatcgatat
      121 gtccctcagg ctgcatcgcg tatccattct tcatctcctc ctcttgtggt gcttgcggac
      181 cggaacggcc ccctctcact tgccatcagg ttttcagatt gtctccagtg agcattgtga
      241 tgtctcacgc aagtgaagca cgttagaaat atctaaaggt ccgggattcg ttcggcaagt
      301 ctgatggtgt ttcatgctgc tccacttgat gaaatcagag gtgaaagccc gttctagccg
      361 ccagcttgac aggatgagga cgccatttga tatttcaggt gcgcgacgaa aatgcgtttc
      421 cgcgcaagat cgggccccgc ggaatgtcgg aatgcgggcg atccagggcc gcagggaacc
      481 gaagggtgag gggaggcaac cgtgccgcac aggatcggtt tcatagggct tggcgtgctg
      541 ggcaacgcca tcgcacgcaa catcgtcgcg agcggatcag atgtgctggc tcatgacatg
      601 tcgatggcgg cccggaaaac ggcgctggcc gacggcctgg cgctggccac ggatctcgcc
      661 gaggtcggcg ggcggtgcga tctcgtcttc acctgtctgc cgaatggcgc cgcgatgcat
      721 gcggtttgca ccgaacttgc cgaaaccggc ggggtcggcg gccaactggt tgtcgatctg
      781 agcacgcttt ccatcgccga caaggagacg gcgcgcgaca ttctgatgcg cgcgggacgg
      841 cgccttctgg attgtccgat cagcggcaac cggatcatgg cgctggacag gaagctgacg
      901 gcattttgca gtggtgagcg cgacgattat gacacggtgc gcgggacgct gctgaccttc
      961 tgccgaaaag aacattatgt cggcgccttc ggcaacggct cgaagatgaa attctgcggc
     1021 aatatcctta acctggttca caataccgtc gcagccgagg cgatggtgct ggcgatcaag
     1081 tccggcctgg acccgcaatt gttccacgag gtcatcagcg gtagtggatc cagctcggcc
     1141 atgttcgagg tgcgtggcaa gctgatggcc gagaacgact atgcccggga aggcatgaat
     1201 ttctcggtgc cgctgaagga ctcgcgcatc atttccgatc acgcggtcag cgtcggaatg
     1261 ccgattccgc tgtatcaggc cgccttgcag ttctaccacg ccgccgccgc gcagggattg
     1321 gcgcatctgg acgccgcggc ggtctgccgc gtgatggaac gcaacgccaa ttgcgagcgc
     1381 ccggcatgaa tgcggcgcaa cctgcctatc gagtgatgga gatgccacgc cttgcttcct
     1441 gcgatcctgg cggtcaccgc gccgctcttc gtcatcatcg gccttggcta tctctgggcg
     1501 cgcttcaaga tgcccttcga cgcgcggacg atcggcgcac tggtgctaca ggtcggcacg
     1561 ccctgcctga tcttctcgac cctgaccggg accggggcgg ccttgtcgga gatgggcaag
     1621 atggtgctgg cggcgattct ggtcatcgcc gcatcgagtg cgttgggggc cttggtgctt
     1681 cgcatcgctg ggcaaccgct caacacctat ctgctggtgg cgatgcatgg caattcgggc
     1741 aacatgggcc tgccgcttgc ttccatggcc ttcggcgccg aagggctgac gctgggcatc
     1801 gtgtatttca ccgtcgtggc aatctctcag aacacgcttg gacatgtcgt cagcgccggc
     1861 cgcttcgacc cgagggcgtt tctgcgccag ccggtggtcc atgccagcgt gatcaccgtc
     1921 ttcgttctgc tcagcggtgt cacggtgccg ggctggattg ccaggaccac ggaactgctg
     1981 gccggaatcg tcattccgac catgctgatc ctgctcggtg tctcgctttc gcggctgacg
     2041 gtcgcggatc tgaagctggc cgcggcaatg tcagtgatgc gtttcggcgt gggggcggtt
     2101 gccggcgtcg ggctgatcct tgcgctggat ctcggcggag ccgaggccgg ggtggtctgg
     2161 atgatggcca ccatgccggc ggcggtggtc agcgtgatct ttgccgaacg ctacggccat
     2221 tcccccgaaa aggtggccgg cacgatcgtc gtctcgacgg tgggaacgct ggcgggcctg
     2281 ccgctgatcg tctggatcgc gatggtactg gcagcatgac gcaaggagga aggacaaccg
     2341 gatggaacgc gaactagcgc ggacgggcgg cgttatggcg cggctcaatt tcaactccgc
     2401 ggtggcgctt gcggtcgtgg cgcttggaat cctgatatgg gttctggtgc cgtatcaggt
     2461 cgccgaaccg ccaagcttct tcggacgcag cagcgtcggg atcagtccca agctgtttcc
     2521 gcaactgatc gccatcggca tgatcttcat cggcgcatgc tatttctatg ccagcctgtc
     2581 gatgcagcag atcaacgggt tcagcggcct tcccgtctcg gcctatgtca acctcgcggt
     2641 ggtgctggcg gctatgctgg cctatgtcgc gcttctgcgt ccgctgggct acgtcgccac
     2701 cagcatgggc gtggcaacgg ccatctcgtt ctattacggc tcgcgcaatc tggtcggcat
     2761 cggattgacc gggatcgccg cacctctggc catctattat ctctttaccc ggtttctcag
     2821 cgtctcgctg ccaccatttc cctggggtca ggactcgttc ttgtttcata gccagaagat
     2881 gatggttgcg gcgagggcga cggcggagag gaagaccttt ggacatctgt cgtagcgggt
     2941 ggcgacgcgt cgccagtcct tgagccttcc gaacatgatc tcgatccggt tgcggcgttt
     3001 gtagcggcgc ttgtcgtgct tgattggttt tccgcgagac ttccggccgg ggatgcaggg
     3061 ctttatcccc ttgtctttca acgcttccct gaaccagtca gcgtcataac cgcggtcggc
     3121 cagcagccaa tccgcctctg gcaggctgcc caggagggcc gctgcaccgg tgtaatcgct
     3181 gacctggcct gcggtcatga agaaccggat cgggcggcca tcggcatcgg ctacggcatg
     3241 cagcttggtg ttcatgccgc ccttggttcg accgatcaga cggccccttt gatcgcctgg
     3301 cccccctttt ccgatcgcag gctggtcgcc gtgcggtggg ctttgagata ggtcgcatcg
     3361 atcatcaccg tcttcggcac agcggcctcg gaggccagac caaccatcat ccgggcgaat
     3421 acgcccttgt cgctccaccg cttccaacgg ttgtagaggg tcttcgctgg gccatactcc
     3481 ttcggtgcat cgcgccacct caacccattg cgattgatga agataatgcc gctcaatacc
     3541 cgtcgatcat cgacgcgcgg cttgccatgg ctcttgggga agaagggctg cagtcgcgac
     3601 atctgcgcct cgctcagcca gaaaaggttg ctcatcgatc agtctccttg cggaggctga
     3661 atcatgcagc gagctgatga tcaatgggtc ctgaccctgg ggatgacgat gttcgacatg
     3721 ctgaccgaag cgacgctgat gctgatgcgt ctcgatgtgc ttttcatgat ctccggcggc
     3781 ctcgtcctgg gaatgctggt cggcgcgctg cccgggttca ccacggtcat ggcgatggcg
     3841 atcgttctgc cgatctcgtt ctttctggag ccgatcctgg gcattccgtt tctcatcggc
     3901 gtctacaagg gcggcatctt cggcggcagc attcctgcga tcctggtgaa cattccgggc
     3961 accggtgcct cgatggcgac cacgctggac gggccggcca tgacccgcaa gggacagtcc
     4021 cgcaaggcgc tggaaatcgc gctggtcgcc tctgccgtgg gtgatttcct gtcgtctttc
     4081 ggcaccatcc tggtgatcgg cctgatcgcg atgatcgccc tgatgatcgg cccgcccgaa
     4141 atctcggcga ttcttctgct gagtctgctg atcatcgtgg tttccagcac gggcagtttt
     4201 ctcaagggca tggtcatgct gctgatcggc atgttcctgg ccacgatcgg ccaggacccg
     4261 gtgggcgcga tggcgcgctt cgatttcggc ttctatccgc tgcaggccgg catcgacctg
     4321 ttacccctga tcatcggcct gttcgccatc cccgagatcc ttttcgccat cgaacatcgc
     4381 cgcgccagcg tcgtcgatcc aagccatacc aaggcccagg gagagccttt gcgctggcac
     4441 gaactgatga catgccgacg cacgatcctg cgctctaccg cgattggcgg tttcatcggc
     4501 atggttccgg gcgtcggcca ggtggtggcg gccttcatgg gctattcggc cgcccagagc
     4561 gcgtcgtcgc atcccgaaac cttcggcaag ggcgatatcg agggtgtggc cgccccggaa
     4621 gccgcgaaca acgcggtgaa cggcccgacc atggtgccgc tgctgacgct gggcatcccg
     4681 ggcgacaaca ttaccgcca
//
LOCUS       DTVW01001181            1062 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2432476, whole
            genome shotgun sequence.
ACCESSION   DTVW01001181 DTVW01000000
VERSION     DTVW01001181.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1062)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1062)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1062
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2432476"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            33..242
                     /locus_tag="EYO87_15620"
     CDS             33..242
                     /locus_tag="EYO87_15620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67393.1"
                     /translation="MVPWSRAVRAIASATGTAPLGPLRTTFMLKGIYPMAIDHVLIPR
                     GWAGRGGTRPRLGSDHRGVLTRIGP"
     gene            501..893
                     /gene="sdhC"
                     /locus_tag="EYO87_15625"
     CDS             501..893
                     /gene="sdhC"
                     /locus_tag="EYO87_15625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011746912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase, cytochrome b556
                     subunit"
                     /protein_id="HIC67394.1"
                     /translation="MADVNRGNRPLSPHLQVYRLPIAAIASIMTRITGHALVAGIVLL
                     VWWLVAAVASPGAFAAADWVMRSWIGFIVMTGSAWALWFHALSGVRHLFYDAGYGLEI
                     DEAKRNSWVIIVGSVVMTLISLILFFIG"
     gene            906..>1062
                     /locus_tag="EYO87_15630"
     CDS             906..>1062
                     /locus_tag="EYO87_15630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011746913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase"
                     /protein_id="HIC67395.1"
                     /translation="MRYITPRKAAEGLGSAHSGTAHHWAMTVSACALVLLTPAFMLVV
                     GSAIGLPR"
BASE COUNT          163 a          342 c          366 g          191 t
ORIGIN      
        1 cgcagccggc actggtcgga ggagatttca acatggttcc ttggtcccgc gcggtccgcg
       61 cgatcgcatc cgcgaccggc acggcgccgc tcggcccgct gcgcacgacg ttcatgctga
      121 aagggatcta tccgatggcg atcgaccatg tgctgatccc gcggggctgg gcgggccgcg
      181 gcgggacacg gccgcgattg ggctcggatc atcgcggtgt gctgacgcgg atcgggccgt
      241 gacaggcgcc aggccgggct gtgcggccgg gaagcgggca ggtggcgcca atgcgagaca
      301 ttgcggcatt cctgctgtga tcacgcaggc cgtggccgtg atcacaaacc gcgaattcga
      361 cttcttttcc accgaagctc tggtaactgc ggatgacagg tggcacaaac gcggtcagta
      421 acggcaccaa tcgccagccc gtgcggccag ccatcgcgcc cgcgccgggt ctgacagaac
      481 cgacaaagga gggccgcatc atggccgatg tgaaccgggg caaccggccg ctttcccccc
      541 atcttcaggt ctacaggctg cccatcgcgg cgatcgcctc gatcatgacg cgcatcaccg
      601 ggcacgccct tgtcgcgggg atcgtgctgc tggtctggtg gctggtggcc gccgtcgcca
      661 gcccgggcgc gtttgccgcc gccgattggg tgatgcggtc gtggatcggc ttcatcgtga
      721 tgacgggatc ggcctgggcg ctgtggtttc acgcgctgtc gggtgtgcgc cacctgttct
      781 acgatgccgg ttacgggctg gaaatcgacg aggcgaaaag aaattcctgg gtgatcatcg
      841 tggggtcggt cgtgatgacg ctgatctcgc tgatcctgtt cttcatcggc tgaccgaggg
      901 caaccatgcg ctacatcacc ccccgcaagg ccgccgaagg tcttggcagc gcccatagcg
      961 gcaccgcaca tcactgggcc atgacggtca gcgcctgtgc gctggtcctg ctgaccccgg
     1021 ccttcatgct ggtggtcggc agcgcgatcg gcctgccgcg cg
//
LOCUS       DTVW01001182            1167 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2433143, whole
            genome shotgun sequence.
ACCESSION   DTVW01001182 DTVW01000000
VERSION     DTVW01001182.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1167)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1167)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1167
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2433143"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..126)
                     /locus_tag="EYO87_15635"
     CDS             complement(<1..126)
                     /locus_tag="EYO87_15635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005796531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HIC67396.1"
                     /translation="MIREFSASDILFIASAARWTLILSAIAFLGGAIGGLGIALAR"
     gene            complement(126..794)
                     /locus_tag="EYO87_15640"
     CDS             complement(126..794)
                     /locus_tag="EYO87_15640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005796532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HIC67397.1"
                     /translation="MYQFNFQPVFENLDLLLYGALLTVRLSLAAMVLGLAVSVMGAVG
                     KTSGIRPLRWLIDVYVEVIRNTPFLVQIFFIFFGLPAIGISMSPNTAALVALVINVGA
                     YGTEIIRAGIESIPRGQIEAGRALGLTPVQIFRYVVVKPALRNIYPSLTSQFIYLMLT
                     SSVVSVISANDLASAGADLNARTFASFEIYLVLTVMYFLLALGFSTLFATIRRVFFTY
                     PASR"
     gene            complement(862..>1167)
                     /locus_tag="EYO87_15645"
     CDS             complement(862..>1167)
                     /locus_tag="EYO87_15645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010396957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family transcriptional regulator"
                     /protein_id="HIC67398.1"
                     /translation="LALKTRPTAVLCFNDVLAAGLMLGLRRAGCEPGRDLAVVGLDDL
                     PLARLTYPPLTSVAMQPDCIGVRAGHLLARRLAQADAPVQRSVILPRLMIRGSSHRD"
BASE COUNT          266 a          369 c          365 g          167 t
ORIGIN      
        1 ccgggccagc gcgatgccca gcccgccgat ggcgccgcca agaaacgcaa tggccgaaag
       61 gatcagggtc cagcgtgccg ccgaggcgat gaacaggatg tcagaggccg agaattcgcg
      121 gatcatcagc ggctcgcagg ataggtgaag aacacgcggc ggatcgtggc aaacagcgtc
      181 gaaaagccaa gggccagcag aaaatacatg accgtcagaa ccagatagat ctcgaaactt
      241 gcgaaggtcc gcgcgttcag atcggccccc gccgaggcca gatcattggc cgagatgacc
      301 gagaccacgc tggaggtcag catcaggtag atgaattggc tggtcagaga gggataaatg
      361 ttccgcagcg ccggctttac caccacatac ctgaagatct gcaccggggt caggcccagg
      421 gcccggcccg cctcgatctg gccgcgcggg atcgattcga tgccggcgcg aatgatctcg
      481 gtcccgtagg caccgacatt gatgaccagg gcgaccagcg ccgcggtgtt gggcgacatg
      541 ctgatgccga tggccggcag gccgaagaag atgaagaaga tctggacaag gaagggcgtg
      601 ttgcgaatga cctcgacata gacgtcgatg agccagcgca gcggccggat gccggatgtc
      661 ttgccaaccg cacccatcac cgacacggcc agccccagca ccatcgccgc cagcgacaaa
      721 cgcaccgtca gcagcgcccc gtaaagcagc aggtcgaggt tctcgaagac gggctggaag
      781 ttgaactgat acatctgctc tcccctgccg atgtgccgct tcccattgtt tagaacgatc
      841 taaaatccgt gcggaggaaa gtcaatcacg atggctgctt cctcttatca tcagcctcgg
      901 cagaatcacg gaccgctgaa ccggcgcatc cgcctgggcc aggcggcggg ccagcaagtg
      961 gccggccctg acaccaatgc agtccggctg catggcaacg ctggtcaagg gtggataggt
     1021 caaccgggcc agaggcagat cgtccagccc caccaccgcg agatcgcggc ccggttcgca
     1081 ccccgcgcgg cgcaggccca gcatcagacc cgccgccagc acgtcgttga aacacagcac
     1141 tgccgtcggc ctggtcttca gcgccag
//
LOCUS       DTVW01001183            1051 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2433707, whole
            genome shotgun sequence.
ACCESSION   DTVW01001183 DTVW01000000
VERSION     DTVW01001183.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1051)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1051)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1051
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2433707"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1051)
                     /locus_tag="EYO87_15650"
     CDS             complement(<1..>1051)
                     /locus_tag="EYO87_15650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_354664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HIC67399.1"
                     /translation="GCTRMVQGGYNVALGHGDTVERHFMDTIVGGKWLPDQDMARRLC
                     EQAVVRVRELENEIGCFFDRVADGSLHHKAFAGQTADRTVHKGDLTGIEIINRLMEQV
                     LARPIEKLQEHRAVGLIPTKDGSALAGVLFIDMRSGKFRFVRARTVLMATGGGPTMYK
                     YHTPSGDKTMDGLAMALRAGLPLRDMEMVQFHPTGLLAGDHTKMTGTVLEEGLRGAGG
                     HLLNGNDHRFMYDYDTRGERSTRDVVSRGIYSEMRKNNSSPNGGVFISMAHLGPDIVA
                     KKFKGMVQRCADSGFDLAGGKVEVVPTAHYFMGGVVVDVDTRTAMEGLYVAGEDAGGA
                     HGSNRLGGNGVANSTV"
BASE COUNT          184 a          368 c          301 g          198 t
ORIGIN      
        1 acggtcgaat tggcgacgcc atttccgccc agcctgttcg atccatgcgc cccgcccgca
       61 tcctcgccgg cgacatacag cccttccatg gccgtgcggg tatcgacatc gacaacgacg
      121 ccgcccatga aataatgcgc ggtcggcacc acctccacct tgccgccggc aagatcgaag
      181 cccgaatcgg cgcagcgctg gaccatgccc ttgaacttct tcgcaacgat gtcggggcca
      241 agatgcgcca tcgagatgaa caccccgcca ttgggcgatg aattgttctt gcgcatctcc
      301 gaatagatgc cgcggctgac cacgtcgcgg gtcgagcgtt cgccgcgggt gtcataatcg
      361 tacatgaacc ggtgatcgtt gccgttcagc agatgcccgc ccgcgccgcg caacccttct
      421 tccagaacgg tgccggtcat cttggtatgg tcgccggcca gcagcccggt cggatggaac
      481 tgaaccatct ccatgtcgcg cagcggcagc cccgcgcgca gcgccattgc aagcccgtcc
      541 atcgtcttgt cgcccgaggg cgtgtggtat ttgtacatgg tggggccgcc acccgttgcc
      601 atcagcaccg tcctggcgcg gacaaagcgg aactttccgc tgcgcatgtc gatgaacagg
      661 accccggcga gggccgagcc atccttggtc gggatcagtc cgacggcgcg atgctcctga
      721 agcttttcga tcgggcgggc cagaacctgt tccatcagcc ggttgatgat ctcgatcccg
      781 gtcagatcgc ccttgtgcac cgtgcgatcg gccgtctgtc ccgcgaacgc cttgtgatgc
      841 agcgagccgt ccgcgacccg gtcgaagaag cagccgattt cgttttccag ttcgcggaca
      901 cgcacaaccg cctgttcgca cagccgcctt gccatgtcct gatccggcag ccacttgccc
      961 ccgacgatcg tatccatgaa gtgccgctcg accgtgtcac catgtcccag ggccacattg
     1021 tagccaccct gaaccatgcg cgtgcagccg c
//
LOCUS       DTVW01001184            2486 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2434759, whole
            genome shotgun sequence.
ACCESSION   DTVW01001184 DTVW01000000
VERSION     DTVW01001184.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2486)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2486)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2486
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2434759"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..134)
                     /gene="glyA"
                     /locus_tag="EYO87_15655"
     CDS             complement(<1..134)
                     /gene="glyA"
                     /locus_tag="EYO87_15655"
                     /EC_number="2.1.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009160766.1"
                     /note="catalyzes the reaction of glycine with
                     5,10-methylenetetrahydrofolate to form L-serine and
                     tetrahydrofolate; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HIC67400.1"
                     /translation="MNAPTRESGFFTDDLASSDPEIAKAIRQELGRQRDEIELIASEN
                     "
     gene            314..1075
                     /locus_tag="EYO87_15660"
     CDS             314..1075
                     /locus_tag="EYO87_15660"
                     /EC_number="2.7.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020038432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD kinase"
                     /protein_id="HIC67401.1"
                     /translation="MTPRIHFTASQAGPAQAALATLGARYGDAPLERAQVVVALGGDG
                     FMLQTLHATEGRDLPVYGMNRGTVGFLMNGFAEEGLPERLAAAEETVINPLHMRATCA
                     DGSIHEALAINEISLLREGPQAAKLRIHVDVKMRMEELVCDGALLATPAGSTAYNYSA
                     HGPILPIDSEVLALTAIAPFRPRRWRGALLPKTARIAIEVLSPERRPVMADADSRSVR
                     HVVWVQIRSAAEIRHRVLFDSGHGLEERLIREQFV"
     gene            complement(1094..1711)
                     /locus_tag="EYO87_15665"
     CDS             complement(1094..1711)
                     /locus_tag="EYO87_15665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010138934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HIC67402.1"
                     /translation="MQVSSTPMRPDRRNVLALIAGGAALIPLRPALALSADAAQAMIQ
                     KTVSEVYAVINSGQPPAQLYRQFEAIFARRADVDIIARTVLGPAARQAGPAQYAAYEQ
                     AFQGYMGRKYGKRFREFVGGRVEVGAARPLKSYFAVRSTAYLNGRAPMEVEWHVSDKG
                     GGIRFFNIIIEGVNMLASERSEMSAMLAQNRGDLAALTAALRQAG"
     gene            complement(1680..2474)
                     /locus_tag="EYO87_15670"
     CDS             complement(1680..2474)
                     /locus_tag="EYO87_15670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018000014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VacJ family lipoprotein"
                     /protein_id="HIC67403.1"
                     /translation="MADELLALIAEVALAGCAASPRIQDGIVINDPYEAQNRRVHDFN
                     KALDARVVGPVARLAFSGAGDPAGAGRAKPVDLVINMGSNLSLPGKVLNQLLQGRPGP
                     AVQNTFRFSVNSTLGILGLFDPAGRDFNLPERDTDFGETLAVWGVPEGAYLELPVLGP
                     STQRDTAGKLVDALIDPLGQVLNRDELALGFGLRLGSKAGERARFGDTVDSVLQGSAD
                     SYAQTRLIYLMHRRYEIGQQEATIDPYDDSQAAAGADAGFIDPYAP"
BASE COUNT          401 a          841 c          839 g          405 t
ORIGIN      
        1 atgttttccg atgcgatcag ctcgatctcg tcgcgctgcc ggcccagttc ctgacggatc
       61 gccttcgcga tctcggggtc gctgctggcc agatcatcgg tgaaaaaacc ggattcgcgg
      121 gtgggggcgt tcatcagtct cgcgtccttt gcatggctga ggggcggcgg gaatggcgct
      181 gtcttatcgc atggccagac ctgcggaaag tgtcaaaacg accgcgcgcg gacccgctgc
      241 gacctgcgct gcggggcttg tcaacggctc ggccgcggcc gatgctgcgc ccgcacgagg
      301 ggacggaacg cggatgacgc cacgaattca tttcaccgcc agccaggccg ggccggccca
      361 ggcggcactg gcgacgctgg gcgcgcgcta tggcgacgca ccgctggagc gggcgcaggt
      421 ggtggtggcg cttggcggcg acggcttcat gttgcagacc cttcacgcca ccgagggccg
      481 cgacctgccc gtctatggca tgaaccgcgg cacggtcggc ttcctgatga acggattcgc
      541 cgaagagggt ctgcccgaac ggctggcggc ggccgaggaa accgtcatca acccgctgca
      601 catgcgcgcc acttgcgccg acggatcgat ccacgaggcg ctggccatca atgagatcag
      661 cctgctgcgc gagggtccgc aggcggcgaa gctgcggatt cacgtcgatg tcaagatgcg
      721 gatggaggaa ctggtctgcg acggcgcgct gctggcgacg ccggcgggtt ccaccgccta
      781 caattactcg gcccacggcc cgatcctgcc catcgattcc gaggttctgg cgctgaccgc
      841 catcgccccc ttccgtcccc gccgctggcg cggcgcgctg ctgcccaaga cagcgcgaat
      901 cgcgatcgag gttctcagcc ccgaacgccg cccggtcatg gcagacgccg attcacgatc
      961 ggtccgtcac gtcgtctggg tccagatccg cagcgccgca gagatccggc accgggttct
     1021 gttcgacagc ggtcacggac tggaggaacg cctgatccgc gagcagttcg tctgacggca
     1081 agggccgggc gggctatccg gcctgtcgca gggcggcggt cagcgccgcg aggtcgcccc
     1141 tgttctgcgc cagcatcgcg gacatttcgg accgttcgct ggccagcatg ttcacgccct
     1201 cgatgatgat gttgaaaaag cggatgccgc cgcccttgtc cgagacgtgc cattccacct
     1261 ccatcggcgc gcggccgttg agataggcag tcgagcggac cgcgaaatag cttttcagcg
     1321 ggcgtgccgc ccccacctcg acccggccgc cgacgaattc gcgaaaccgc ttgccgtatt
     1381 ttcggcccat atagccctgg aaagcctgct cgtaggcggc gtattgcgcc gggccggcct
     1441 gacgcgcggc agggcccagc acggtgcggg cgatgatgtc cacatcggcg cggcgcgcga
     1501 agatcgcctc gaactggcga tacaattgcg ccggcggctg gccgctgttg atgacggcat
     1561 agacctcgga cacggtcttc tggatcatcg cctgggcggc gtcggcactc agcgccagcg
     1621 ccggacgcag cggaatcagc gccgcgccac ccgcgatcag cgccaggacg ttgcgtcggt
     1681 cagggcgcat aggggtcgat gaaacctgca tccgcgccgg ccgccgcctg gctgtcgtca
     1741 taggggtcaa tggtcgcctc ctgttgtccg atctcgtagc ggcgatgcat caggtagatc
     1801 agccgcgtct gcgcatagct atcagcactg ccttgcaata cgctatccac cgtgtctccg
     1861 aaacgggccc gctcaccggc ttttgagccg aggcgcagcc cgaagcccag cgcaagttcg
     1921 tcccggttca gcacctggcc cagcgggtcg atcagcgcat cgaccagctt gcccgccgtg
     1981 tcgcgctgcg tcgaggggcc aaggaccggc aattccagat acgcgccctc gggaacgccc
     2041 cagacggcca gtgtctcgcc aaagtcggtg tcgcgttcgg gcaggttgaa atcgcggccg
     2101 gcggggtcga aaaggcccag gatccccagg gtggaattga ccgagaaccg gaaggtgttc
     2161 tgcacggccg ggccgggtcg cccctgaagc agctgattca agaccttgcc cggcagcgac
     2221 aggttcgagc ccatgttgat gaccagatcg acgggcttgg cgcggcccgc gccggccgga
     2281 tccccggcgc ccgagaacgc cagcctcgcc acaggcccga ccacgcgggc atccagcgcc
     2341 ttgttgaaat catggacccg gcggttctgc gcctcgtagg ggtcgttgat cacgattccg
     2401 tcctggatcc ggggcgaggc ggcgcatccg gccagcgcga cctccgcgat cagggcgagt
     2461 agctcatcgg ccaccggggc gggctc
//
LOCUS       DTVW01001185            1319 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2435667, whole
            genome shotgun sequence.
ACCESSION   DTVW01001185 DTVW01000000
VERSION     DTVW01001185.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1319)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1319)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1319
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2435667"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(103..516)
                     /locus_tag="EYO87_15675"
     CDS             complement(103..516)
                     /locus_tag="EYO87_15675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008031069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine kinase"
                     /protein_id="HIC67404.1"
                     /translation="MTQMHATTVALRGRGLLILGPSGSGKSTLALQLMAVGARLVADD
                     RTDLTAQGDDVVASCPAALVGTIEARGVGLLAAPPHGPVRLSLVVDLAQEGVARLPDC
                     TTYPLLGRALPLVPGPYRSHLYAALRQYLLFGRRQ"
     gene            724..>1319
                     /locus_tag="EYO87_15680"
     CDS             724..>1319
                     /locus_tag="EYO87_15680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010394022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxykinase (ATP)"
                     /protein_id="HIC67405.1"
                     /translation="MTTRVNPKCRLEDQGIEGLGRVYYNLPEPALITEAVVRGEGRLG
                     LGGAFLVSTGAHTGRSPKDKFVVRTPDVEDSIWWDNNAAMAPDAFDRLHHDMLAHMQG
                     RDYFVQDLFAGADPDLRLDVRVITELAWHGLFIRHLLRRPEAAELDGFTPEFTIINCP
                     GFTAGPDRHGCRGGTVIALNLHKKLILIGGTAYAGENK"
BASE COUNT          230 a          443 c          407 g          239 t
ORIGIN      
        1 caccagaacc agcctctgcg cgtcggctgt ccgggggccg tcgcggtctt ccgccagatc
       61 gagatcctca gccatcgggt gtcagacttc ctttccgtcg cgtcattgcc gccgtccgaa
      121 cagcagatac tgccgcaatg cagcataaag atgcgatcga tagggccccg gcacaagtgg
      181 caaggccctg ccaagcagcg gataggtcgt gcagtctggc aagcgtgcca cgccctcctg
      241 cgccagatcg acgaccagcg acagccggac gggaccatgc ggcggggccg ccagcagccc
      301 cacgccgcgt gcctcgatcg tgccgaccag cgcggcgggg cagcttgcca cgacatcatc
      361 cccctgcgcc gtcagatcgg tccggtcgtc ggccaccagt cgcgctccga cggccatcag
      421 ttgcagcgcc agcgtggatt ttccgctgcc ggacggcccc aggatcagca gcccccgccc
      481 tctcagggcc acggtcgtgg cgtgcatctg cgtcattcga atcactcctc tccgtcattc
      541 tggctcggaa agggttaatt ttccgtcccc ggtcctgcat attctgcatt gttggcgata
      601 acattttgcg tttgcgctaa ccgtttgcgc tcgcgtcttt tccgctttcg accgcgtgct
      661 atagccggtc agaacggcgt cacgaaagcg tcgcggatca aggaaaagca ggagcgtcca
      721 aagatgacca cgcgcgtcaa tccgaaatgc cggctggagg atcagggtat cgaggggctt
      781 gggagggttt actacaacct gccggaaccg gcgctgatca ccgaggcggt cgtgcgcggc
      841 gaaggccgcc tgggccttgg cggcgcgttc ctggtctcga ccggggctca taccggacgt
      901 tcgcccaagg acaagttcgt ggtccgcacc cccgatgtcg aggactcgat ctggtgggac
      961 aacaacgcgg cgatggcgcc tgacgccttc gaccggctgc accatgacat gctggcccat
     1021 atgcaggggc gcgattattt cgtgcaggat ctgttcgccg gcgccgatcc cgatctgcgt
     1081 ctggatgttc gggtgatcac cgaactggcg tggcacgggc tgttcatccg ccacctgctg
     1141 cgtcgccccg aggcagcgga actggacggc ttcacgcccg aattcaccat catcaactgc
     1201 cccggcttca ccgccggccc cgatcggcat ggctgccgcg gcggcacggt gatcgcgctg
     1261 aaccttcaca agaaactgat cctgatcggc ggcaccgcct atgcgggcga gaacaagaa
//
LOCUS       DTVW01001186            2265 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2435941, whole
            genome shotgun sequence.
ACCESSION   DTVW01001186 DTVW01000000
VERSION     DTVW01001186.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2265)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2265)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2265
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2435941"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..989)
                     /locus_tag="EYO87_15685"
     CDS             complement(<1..989)
                     /locus_tag="EYO87_15685"
                     /inference="COORDINATES: protein motif:HMM:PF13231.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67406.1"
                     /translation="MRPSIWSATLLFALTVLTLILLRPLTPIDETRYVAAAWEMYQGG
                     SALVPHLNGALYAQKPPLLFWLIDLVWLMGGVSTLGARLVAPAFAVAAVALTGLLARR
                     LWPGDPARAARAALILAVSPVFLLFGSTTMFDSILTVATLWAMLAMLWAWRRPDRWTP
                     FLALGAAIALGVYAKGPVILIHVLPVALTAPLWAGRELPAWRWYRGVGLSILTALALV
                     ALWLVPALILGGEEYRTEVLWRQSAGRVVSSFAHQRPFWFFLAMLPLFLWPFGWTLPG
                     LRALRPSALTGSAPGRFLSIWFIGTLLAFSLISGKQTHYLLPELPALALLLSGA"
     gene            complement(986..1258)
                     /locus_tag="EYO87_15690"
     CDS             complement(986..1258)
                     /locus_tag="EYO87_15690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016855784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67407.1"
                     /translation="MIWLAVGLLGQALFSARFLVQWLASERKRQSIIPVAFWWLSLCG
                     GATLLAYALWRRDPVFILGQGMGLFVYTRNLILIRRHVRSLAEAGA"
     gene            1428..2081
                     /locus_tag="EYO87_15695"
     CDS             1428..2081
                     /locus_tag="EYO87_15695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013066395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HIC67408.1"
                     /translation="MRILLVEDGPDLADAVVRFLRGGAHAVDHAASLSEARDALDVAV
                     YDAIVLDLALPDGSGLRLLRDIRASGNRVPVIIASAHDQISDRIEGLDSGADDYVVKP
                     FDLGELDARLRAHARRADGDPAVQLRLGDLRIDRGAARLFRDEGEIRLTSREWALFDA
                     LLASRGRVMSRRALEERLYSFGDEIEGNAVEVYVSRLRAKLGARLIETRRGLGYLIP"
     gene            2078..>2265
                     /locus_tag="EYO87_15700"
     CDS             2078..>2265
                     /locus_tag="EYO87_15700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67409.1"
                     /translation="MRRGWSLRGRLVRRLVLGVSLGWLCGMALTMLFLSREMTEFMDD
                     ILRDSARVVLATGGDFAAA"
BASE COUNT          403 a          778 c          756 g          328 t
ORIGIN      
        1 gcccccgaca gaagcagcgc cagcgcgggc agttccggca gcagataatg cgtctgcttg
       61 ccgctgatca gggaaaacgc cagcagcgtg ccaatgaacc agatcgacag gaatcgaccc
      121 ggcgcgcttc cggtcagcgc cgatggacgc agcgcccgca atcccggcag cgtccagccg
      181 aagggccaca ggaacagggg cagcatggcc aggaagaacc agaacggccg ctggtgcgca
      241 aaggacgaca ccacccgccc cgcgctctgc cgccacagga cctcggttcg gtattcctcg
      301 ccgcccagga tcagcgccgg caccaaccac agcgccacaa gcgcaagcgc cgtcaggatc
      361 gacagcccga caccgcgata ccagcgccag gccggcagtt cccgcccggc ccagagcggc
      421 gcggtcagcg cgaccggcag gacatggatc aggatcaccg gtcccttggc atagacccca
      481 agcgcaatgg ccgcgccgag cgcgaggaac ggggtccagc ggtccggcct tcgccatgcc
      541 caaagcatcg ccagcatcgc ccacagcgtc gccaccgtca gaatcgaatc gaacatcgtg
      601 gtcgagccga acagcagaaa caccggcgag accgccagga tcagcgccgc ccgggccgcc
      661 cgcgccggat ctccgggcca caggcgccgt gccagcagcc cggtcagcgc caccgccgcc
      721 accgcgaagg ccggcgcgac cagccgcgcg cccagcgtcg agacaccgcc catcagccag
      781 accagatcga tcagccagaa cagcagcggc ggcttctgcg catagagcgc cccgttcaga
      841 tgcggcacca gcgccgatcc gccctgatac atctcccagg cggcggcgac gtagcgcgtc
      901 tcgtcgatcg gcgtcagcgg gcgcagcagg atcagcgtca gaaccgtcag cgcgaacagc
      961 agcgtcgcgg accagatgga aggtctcatg caccggcctc ggcgagactg cggacatggc
     1021 ggcggatcag gatcaggttg cgggtataga cgaacagccc catgccctgc ccgagaatga
     1081 agacaggatc gcgccgccac agcgcatagg ccagcagcgt ggcaccgccg cacagcgaca
     1141 gccaccagaa ggccacgggg atgatgcttt gacgtttgcg ctcgctggcc agccactgga
     1201 ccaggaagcg tgccgaaaac agcgcctgcc ccagcagccc cacggcaagc cagatcatgt
     1261 tgacgttcag ttgcaaaatg aattcctgcc tttttggcgt tcgcggtagg taggcaacct
     1321 tgctccttcc ttacagccgc gcgcttttct tctgacccct cgattgatat tggaccggaa
     1381 tgcccgccat atcaatccgg ccgggcaatg aatgaaacga ggggctcatg cggattctgc
     1441 tggtcgagga cgggccggat cttgccgatg cggtggtgcg gttcctgcgc ggcggcgccc
     1501 atgccgtcga tcacgccgcc tccctgtccg aggcccgcga tgcgctggac gtggccgtat
     1561 atgacgcgat cgtgctggat ctggccctgc cggacggatc cggattgcgg cttctgcgcg
     1621 acatcagggc gtcgggcaac cgggtgccgg tgatcatcgc cagcgcccat gaccagatca
     1681 gcgaccggat cgaggggctg gattcgggcg ccgacgatta tgtcgtcaag cccttcgatc
     1741 tgggcgagct ggacgcccgc ctgcgcgcac atgcccgccg cgccgacggc gatccggcgg
     1801 tgcagctgcg cctgggcgat ctgcgcatcg accgcggcgc cgcccggctg ttccgcgacg
     1861 agggcgaaat tcgcctgacc tcgcgggaat gggcgctgtt cgatgcgctt ctggcctcgc
     1921 gcgggcgggt catgtcgcgg cgggcgctgg aggaacggct gtattccttt ggcgacgaga
     1981 tcgagggcaa cgccgttgag gtctatgttt cgcgcctgcg cgccaagctg ggtgcgcggc
     2041 tgatcgagac ccggcgcggc ctgggctatc tgatcccgtg aggcgcggct ggtccctgcg
     2101 cgggcgtctg gtccgccggc tggttctggg cgtcagcctg ggatggctgt gcgggatggc
     2161 gctgacgatg ctgttcctgt cccgcgagat gaccgagttc atggacgata tcctgcgcga
     2221 ttccgcccgg gtcgttctgg cgacgggcgg cgatttcgcg gccgc
//
LOCUS       DTVW01001187            1072 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2435958, whole
            genome shotgun sequence.
ACCESSION   DTVW01001187 DTVW01000000
VERSION     DTVW01001187.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1072)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1072)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1072
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2435958"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..305)
                     /locus_tag="EYO87_15705"
     CDS             complement(<1..305)
                     /locus_tag="EYO87_15705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67410.1"
                     /translation="MPQFDGLISFLDSRSFGSIWFWLALVGMWSATGRNVIGVPVEVL
                     AAARRASVRDASEEGLAAITLLDWLSLTLPRWQLGRREGAIVSGVTTFLLTSLAILG"
     gene            408..>1072
                     /locus_tag="EYO87_15710"
     CDS             408..>1072
                     /locus_tag="EYO87_15710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010396047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HIC67411.1"
                     /translation="MASPIIAPFPASRLRRLRRTPGLRAMVAETNLTSANLIWPIFVT
                     EVAGAEGEIASMPGVERLTLDGARRAAERAARLGIPAICIFPHSDQDLKTESCERAWD
                     PDNIGNRAIRAVKEAVPDLAVMTDIALDPYNANGHDGIVVDGEILNDETVEALVRMAL
                     VQAEAGADILGPSDMMDGRIRALRTALEAQGHKNVAILSYAAKFASAFYGPFRDAVGA
                     TGRL"
BASE COUNT          196 a          374 c          349 g          153 t
ORIGIN      
        1 aagcccagaa tggccagcga agtcagcaga aacgtggtca cgcccgacac gatcgcgccc
       61 tcgcgcctgc caagctgcca tcgcggcagg gtcagcgaca gccagtccag cagcgtgatc
      121 gcggccagcc cttcttcgga ggcatcgcgg accgaagcgc gacgggcagc ggccagcacc
      181 tcgaccggga cgccgatcac gttgcggccg gtggccgacc acatcccgac cagagccagc
      241 cagaaccaga tggacccgaa agagcggctg tcgagaaagc tgatcaatcc gtcgaattgc
      301 ggcacgtccg cgccttcctt gtccttggct gcgcgcgacc ttagaacggg cgcgcgggaa
      361 gggaaagcag ttgcctttcc cggccgccgc cgcgaaagga ccccgccatg gccagcccga
      421 tcatcgcccc cttccccgct tcgcgcctgc gccgcctgcg ccgaacgccc ggccttcgcg
      481 ccatggtcgc cgagaccaac ctgacatccg ccaacctgat ctggccgatc ttcgtcaccg
      541 aggtcgccgg cgccgagggc gagatcgcat ccatgcccgg ggtcgagcgg ctgacactgg
      601 acggcgcgcg gcgcgcggcg gaacgcgccg cccgcctggg cattccggcg atctgcatct
      661 ttccccattc ggatcaggac ctgaagacgg aaagctgcga acgcgcctgg gatcccgaca
      721 atatcggcaa ccgcgcgatc cgcgcggtca aggaggcggt acccgatctt gccgtgatga
      781 ccgatatcgc actggatcct tataacgcca atggccatga cggcatcgtc gtggatggcg
      841 agatcctgaa cgacgaaacg gtcgaggcgc tggtcaggat ggcactggtc caggccgagg
      901 ccggggccga catcctgggt ccttcagaca tgatggacgg ccggatccgc gcgctgcgca
      961 cggcgctgga ggcgcagggc cacaagaacg tggcgatcct gtcctatgcg gcgaaattcg
     1021 ccagcgcctt ctatggtccg ttccgcgatg cggtgggcgc cacgggacgg ct
//
LOCUS       DTVW01001188            5660 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2436626, whole
            genome shotgun sequence.
ACCESSION   DTVW01001188 DTVW01000000
VERSION     DTVW01001188.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 5660)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5660)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5660
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2436626"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..182
                     /locus_tag="EYO87_15715"
     CDS             <1..182
                     /locus_tag="EYO87_15715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67412.1"
                     /translation="EVPAILQRGERVLSRREAQDYGKGVTVNINARDAESFRQSRTQI
                     AADIARAVSLGRRGL"
     gene            211..837
                     /locus_tag="EYO87_15720"
     CDS             211..837
                     /locus_tag="EYO87_15720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013654516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02217 family protein"
                     /protein_id="HIC67413.1"
                     /translation="MAFHEVRFPDTISRGARGGPERRTQIVELASGDEERNASWASSR
                     RRYDVSYGIRRADDLAAVVAFFEARNGRLYGFRFKDWADHRSCLPSQAPSSMDQQISI
                     GDGMTTAFQLVKRYPSGGQSWTRAITKTVAGTVQIALNDVAQPSGWSVDHKTGVVRFD
                     TAPSDGIAITAGFEFDVPVRFDSDVLDVTLDIERLGSITSIPLLEIRR"
     gene            834..1718
                     /locus_tag="EYO87_15725"
     CDS             834..1718
                     /locus_tag="EYO87_15725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2163 domain-containing protein"
                     /protein_id="HIC67414.1"
                     /translation="MKNIPPALQTHLDSGTTTLAWCWRITRADGTSFGFTDHDRALVF
                     DGTEFEPESGLTASEIRSGADLSVDAQDAAGALRSDRITEADILDGRWDNAEVELWRV
                     NWQAPGQRVLMRRGAIGQIRRGRHAFVAEIRSMSHILGQTVGRTFQASCDATLGDARC
                     GIDLEDPAFRGTGTVIDGLRDRAFTASGLGGFQAGWFRFGTLTWTSGPNAGRRAEVLA
                     HDRSDSVAVLTLLEAPIRPIGTGNGFTVHAGCDKRIATCGQKFGNVVNFRGFPHIPGQ
                     DTILRYASQDSGHDGGVL"
     gene            1742..2185
                     /locus_tag="EYO87_15730"
     CDS             1742..2185
                     /locus_tag="EYO87_15730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase"
                     /protein_id="HIC67415.1"
                     /translation="MDRVIAADPDSVIAAARSWLGTPYHDQASLRGVGCDCLGLARGV
                     WRELVGDEPSPIPPYSRDWGETGCREVLADGARRMMIELPVADAGPGALVLFRMRTGA
                     IAKHVGILTTPYRFIHAYERLGVIEEPLTSTWRRRIAFAFLFPSI"
     gene            2197..>5660
                     /locus_tag="EYO87_15735"
     CDS             2197..>5660
                     /locus_tag="EYO87_15735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011910624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67416.1"
                     /translation="MATLVLASVGATIGGGFGGAILGFSGAAIGGTIGSTIGAAVDSW
                     IVSSLAPAQRIEGARLDNLRITASTEGAVIPRVFGRMRMGGNITWATDFREETKTNRQ
                     GGGKGGGPKVETTEYLYYASFAVALAEGELTGIGRIWADGKPLDISGITWRWYPGSET
                     QEPDPFIAATMGAKATPAYRGTAYVVFEDLPLNDYGNRLPQLSFEVFRPLADPDTAEG
                     LTRAVTLIPASGEFTYATEAIRKGGHGDSTAENLNATPGSPDMIVALDRLQAMAPKVE
                     SVSLVVAWFGNDLRCGHCAIRPGVEVAEKASSPKTWSVNGIARADAHLVSRDFEDRPV
                     YGGTPADFAVVQAIREMKVRGLRVTFYPFILMDVPPGNALPDTYSGHAAGTGQPAFPW
                     RGRITCSPAAGQAGSVDKMSAAGDQVDAFFGNASVGDFTVIGDEVRWAGDPGDHGLRR
                     MVLHYAHLCAAAGGVDAFLIGSEMRGLTTIRATGNSYPAVAAFRALAADVRSILGPGR
                     KISYAADWSEYFGHQPSDGSGDVHFHLDPLWADESIDFIGIDNYLPLSDWRDGFDHLD
                     ARDGWPAIHDRAYLQSNIAGGEGFDWFYASGADRAAQVRTPITDGAHGKPWVFRPKDI
                     LGWWSNRHFDRPGGVEAGTPTAWVPQSKPIRFTELGCPAIDRGTNQPNVFYDPKSSES
                     FVPYHSRGWRDDAIQRAYLEATYLFWGKASNNPVSAITGQRMVEVSECAAWTWDARPY
                     PFFPALGDVWTDGANWRLGHWLTGRLGAVSLAALVRHLCLRAGLLESRIDVSGLWGAA
                     EGYAITALESPRASITTLARHFGFDAVESAGTIRFVMRGRAPVATIAHDDLVAGNTDG
                     EPIELTRAQETELPQALKWQVARADEDYDAALVEASRITVDTSRIASESFPMAVPPEE
                     AERRCRRALQEAWAGRESAVFRLPPSRLTLDPTDVIALTHDGRTEQFRLIAVADAEAR
                     GVEAVRQDREAYDLPPGAERPATLPRAVTFGPPEVILLDLPQLRDDIPAHQPLIAATA
                     KPWPGALAVYRSPGEDGFELVTTVRRRANLGRLAADLWAGSTSRFDMGNVLILDLASG
                     QVDSVSDLALFGGANALAVESALGRWEIVQAGHAELIAPGRYRLRRLLRGQRGTEQAM
                     GMPTPAGAR"
BASE COUNT          911 a         1890 c         1877 g          982 t
ORIGIN      
        1 acgaggtgcc ggccatcctg caacgcggcg agcgcgtcct ctcccgccgc gaggcgcagg
       61 attacggcaa gggcgtcacg gtcaacatca acgcccgcga cgccgagagt tttaggcaat
      121 cccgcaccca aatcgcggcc gatatcgccc gcgccgtttc gctcggtcgg cgcggcctct
      181 gacacatccc tcacgaaagg aacgcgcagg atggcattcc acgaggtccg gtttccggac
      241 acgatcagcc gcggcgcgcg cggcgggccg gaacggcgca cccagatcgt cgaactggcc
      301 tcaggcgacg aggagcgcaa tgccagctgg gccagttcgc gccgccgcta cgacgtcagc
      361 tatggcatcc gtcgcgccga cgatctggcg gcggtggtcg cgttcttcga ggcgcggaac
      421 ggacggcttt atggcttccg cttcaaggac tgggccgatc atcggtcctg cctgccttcg
      481 caggcgccgt cgtcaatgga tcagcagatt agcataggcg atggcatgac gaccgcgttt
      541 cagttggtga agcgctatcc ctccggaggg caaagctgga cccgggcgat taccaagacg
      601 gtcgcaggca cggtccagat cgccctgaac gacgtggcgc aacccagcgg ctggtcggtc
      661 gatcacaaga ccggcgtcgt caggttcgac accgcaccat ccgacggcat cgccatcacg
      721 gcgggtttcg aattcgacgt gccggtccgt ttcgacagcg acgtgctgga cgtcacgctg
      781 gatatcgagc ggctgggctc catcacttcc attcccctgc tggagatccg gcgatgaaga
      841 atatcccgcc tgccttgcag acccatctcg acagcggcac cacgaccttg gcctggtgct
      901 ggcgcatcac ccgcgccgat ggcacgtctt tcggcttcac cgatcacgac cgggcgctgg
      961 tgttcgacgg cacggagttc gaaccggaaa gcgggctgac cgccagcgag atccgctccg
     1021 gtgccgatct ctcggtcgat gcgcaggacg cagccggcgc gctgcgctcg gaccggatca
     1081 ccgaggccga tattctcgat ggacgctggg acaatgccga ggtggagctc tggcgggtca
     1141 actggcaggc gcccggacag cgcgtgctga tgcggcgcgg cgccatcggt cagatccggc
     1201 gcggacggca tgccttcgtg gccgagatcc gctcgatgtc ccatatcctc ggccagacgg
     1261 tcgggcggac atttcaggcc agttgcgatg cgacgctcgg cgatgcccgc tgcgggatcg
     1321 atcttgagga tccggctttt cgcggcaccg gcaccgtcat cgacgggcta cgcgaccggg
     1381 ctttcaccgc ctccggcctt ggagggtttc aggcgggttg gttccgcttc ggaacactca
     1441 cctggacatc cggtcccaat gccgggcggc gggcggaagt cctggcccat gaccgcagcg
     1501 atagcgtggc ggtgctgaca ttgttggagg cgccgatccg ccccatcggc acgggcaatg
     1561 gcttcaccgt ccatgccggc tgcgacaagc gcatcgcgac ctgcggccag aagtttggca
     1621 atgtggtgaa cttccggggt tttccgcaca tccccggcca ggacacgatc ctgcgctatg
     1681 ccagccagga tagcggtcat gacgggggcg tgctgtgacg cggccgcaat ccgccaccga
     1741 tctggatcgc gtcattgccg cagatcccga cagcgtcatc gccgccgcac gcagctggct
     1801 tggcacgccc taccacgatc aggccagctt gcgtggtgtc ggctgcgact gcctcgggct
     1861 ggcgcgcggc gtctggcgcg aactcgtggg cgatgagccc tctccgatcc cgccctatag
     1921 ccgagattgg ggcgagacgg gctgccgtga ggtgctggcg gacggcgcgc gacggatgat
     1981 gatcgagctg ccggtcgccg atgccgggcc gggcgccctc gtcctgttcc gcatgaggac
     2041 gggcgctatc gccaagcatg tcggcatcct gaccacaccg taccgcttca tccacgccta
     2101 tgagcggctg ggcgtgatcg aagaaccact gacctccact tggcgccgcc gcatcgcctt
     2161 cgcctttctc ttccccagca tctgagattt cgtcacatgg caacccttgt tctggcttct
     2221 gtcggcgcca cgattggcgg cggcttcggg ggcgcgattc tcggtttttc cggtgcggcc
     2281 atcggcggca cgatcggatc gaccatcggc gcggccgtgg acagctggat cgtatcctcg
     2341 ctcgccccgg cccagcgcat cgagggcgcc cggctcgaca atctgcgcat caccgcctca
     2401 accgaaggcg cggtcatccc gcgcgtcttc gggcgaatgc gcatgggcgg gaatatcact
     2461 tgggccacgg atttccgcga agagaccaaa accaaccgtc agggcggcgg caagggcggc
     2521 gggccgaagg tcgagacgac cgaatatctc tattatgcgt ctttcgccgt ggcgctggcc
     2581 gagggcgagc ttaccggcat cgggcgcatc tgggcggatg gcaagccgct cgacatctcc
     2641 ggaatcacct ggcgctggta tccgggcagc gagacgcagg aaccggaccc gttcatcgcc
     2701 gccaccatgg gtgccaaggc cacccccgcg tatcgcggca ccgcctatgt cgtcttcgag
     2761 gatctgccgc tgaacgatta cggcaatcgc ctgccacagc tctccttcga ggtctttcgc
     2821 ccccttgccg atccggacac ggccgagggt ctgacccgcg ccgtgaccct gatcccggcc
     2881 tcgggcgagt tcacctatgc caccgaagca atccgcaagg gcggccatgg cgacagcacg
     2941 gccgagaacc tgaacgccac cccgggcagc ccggacatga tcgtggcgct ggaccggttg
     3001 caggccatgg ccccaaaggt cgagagtgtc agtctggtcg tggcctggtt cggcaacgat
     3061 ctgcgctgtg gccattgcgc catccggcct ggggtcgagg tagccgagaa ggccagcagc
     3121 cccaagacat ggtccgtaaa tggcatcgcc cgtgccgatg cccatctcgt cagccgcgat
     3181 ttcgaagacc gcccagtcta tggcggcacg ccagcagatt tcgcggtggt gcaggcgatc
     3241 cgggagatga aggtgcgcgg gctgcgcgtt accttctatc cgttcattct gatggacgtg
     3301 ccgcccggca atgcgctgcc ggatacctat tcgggccatg ctgcgggaac tggccagccc
     3361 gcctttccat ggcgcgggcg gatcacctgt tcgcccgccg ccggtcaggc gggcagcgtc
     3421 gacaagatgt cggctgccgg ggatcaggtt gatgccttct tcggcaacgc cagtgtcggc
     3481 gatttcaccg tcatcggcga cgaggtccgc tgggcgggcg atccgggtga tcatgggctg
     3541 cggcgcatgg tgctacatta cgcccatctc tgcgcggcgg cgggtggcgt ggacgctttc
     3601 ctcatcggat cggagatgcg cgggctgacc acgatccggg caaccgggaa cagctacccg
     3661 gccgtcgcgg cattccgggc gctggccgca gatgtccgat ccatcctcgg gcccggcagg
     3721 aagatcagct atgccgccga ctggtcggaa tatttcggcc atcaaccaag cgatggcagc
     3781 ggtgatgtcc atttccacct cgatccgctc tgggcggacg aaagcatcga tttcatcggc
     3841 atcgacaatt acctgccgct gtcggattgg cgcgacggct tcgatcatct ggacgcccga
     3901 gacggctggc ccgccatcca tgaccgagcc tatctgcaat ccaacattgc gggcggcgaa
     3961 gggttcgact ggttctatgc ctcaggggct gatcgggccg cgcaggttcg gactccgatc
     4021 acggacggcg cgcatggaaa gccttgggtc ttccgcccca aagatatttt gggctggtgg
     4081 tcgaaccggc atttcgaccg gccgggcggg gtcgaggctg gtacaccgac ggcatgggtg
     4141 ccgcagtcca aaccgatccg cttcactgag ctcggctgcc cggccatcga ccgcggcacc
     4201 aatcagccca acgtcttcta cgatcccaaa tcctcggaaa gcttcgtgcc gtaccattcg
     4261 cgcggctggc gcgacgatgc cattcagcga gcctatctgg aagcgacata cctgttctgg
     4321 ggcaaggcat cgaacaaccc ggtttctgcg atcaccggcc agcgcatggt cgaggtctcg
     4381 gaatgcgcgg catggacctg ggatgcccgc ccctatccct tctttccggc gctgggcgat
     4441 gtctggacag atggcgccaa ctggcggctc gggcattggc tgaccgggcg gctgggcgcg
     4501 gtctcgctgg ccgctctcgt ccgccatctc tgcctgcgcg ccgggctgct ggaatcccgc
     4561 atcgatgtct ccggcctctg gggcgcggcc gagggctatg ccatcaccgc gctggaaagc
     4621 ccgcgcgcat ccatcaccac gctggcgcgg catttcggct tcgatgcggt cgagagtgcg
     4681 ggcaccatcc gatttgtgat gcgcggccgg gcaccggttg ccaccatcgc ccatgacgat
     4741 cttgtcgcgg gcaacaccga tggcgaaccc atcgagctga ctcgcgccca agagacggag
     4801 ctgccgcagg cgctgaagtg gcaggtggcc cgggccgacg aggattacga tgcggcgctg
     4861 gtcgaggcgt cccgcatcac cgtcgacacc agccgcatcg cctccgagag ttttccgatg
     4921 gcggtgccgc cggaagaggc cgagcgccgc tgccgccggg ccctgcagga agcctgggcg
     4981 ggccgcgaaa gcgcggtgtt tcgactaccg ccctcgcggc tgacgctgga cccgaccgat
     5041 gtcattgcgc tcacccacga tgggcgcaca gagcagttcc gcctgatcgc cgtggccgat
     5101 gcagaagcac gtggcgtgga ggctgtgcgc caggaccggg aagcctatga tctgccgccc
     5161 ggtgccgagc gaccggccac cctgccccgc gctgtgacct tcgggccgcc ggaggtcatt
     5221 ctgctcgacc tgccccagct gcgggacgat atccctgcgc atcagccgct gatcgcagcc
     5281 acggcaaagc catggcccgg cgcgctggcc gtctatcgca gccccggcga ggatgggttc
     5341 gaacttgtga cgacagttcg ccgcagggcc aatctcgggc gtctggccgc cgatctctgg
     5401 gccggttcga catcgcgctt tgacatgggc aatgtcctga tccttgatct cgccagcggt
     5461 caggtggaca gcgtcagcga tctggcgctt tttggtggcg ccaacgcgct ggcggtggaa
     5521 tccgcactgg ggcgctggga gatcgttcag gcgggccatg ccgagttgat cgcgccgggg
     5581 cgatatcgat tgaggcggct gttgcgcggc cagcgcggca ccgaacaggc catggggatg
     5641 cccaccccgg ccggggcgcg
//
LOCUS       DTVW01001189            3691 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2436788, whole
            genome shotgun sequence.
ACCESSION   DTVW01001189 DTVW01000000
VERSION     DTVW01001189.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3691)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3691)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3691
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2436788"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..482)
                     /locus_tag="EYO87_15740"
     CDS             complement(<1..482)
                     /locus_tag="EYO87_15740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011749186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication protein"
                     /protein_id="HIC67417.1"
                     /translation="MSRKRRMFEIEMPEDNDPAETFPAGKADRPAPAAPRRGPMAAAI
                     TETAESSRDRARIAAGIRAENDALAQEHVRLKRAGLITDLIPLEAIDTHKLIRDRAKG
                     GDFELAELVASIRDIGLSNPIRVEPAAEGRYELIQGWRRLSAYRALLEETGDAETWGR
                     "
     gene            complement(479..1783)
                     /locus_tag="EYO87_15745"
     CDS             complement(479..1783)
                     /locus_tag="EYO87_15745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007803648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome partitioning protein ParA"
                     /protein_id="HIC67418.1"
                     /translation="MYTHDDLARLQSQSLKMQGWIRRQTFSPELEKTLRRFSSWEVAD
                     LIFRINQSTFRGKLAADPNLPLGEVEEDGRQRWFSLDEINELRRRIRVGKKSLLPPRP
                     AGKRAFRAAIANFKGGAGKSTVALHFAHAAALDGYRILVVDFDPQATLSHSMGLTDIG
                     EDHTVWGIMARDLERETDRMNAASAGAESGTALPHRKLPASIRDMGLGSLRPSDFIKP
                     TAWSTIDIVPSCANAAFVEFASAQYRHLNPEWTFFGAVSRFLDALADDAYDLILFDCP
                     PAIGYQSMNAVFAADMLYIPSGPGYWEYDSTTSFIGQLAEALEDLSHGFEDFPTGKIA
                     LPKAFADVRFLMTRFEPSNDLHRAMFDAFGQVFGDRMARHPIEMTRAVEQSGRFLSSI
                     YEIDYREMTRGTWRRARASFDQAYEEFRTHVLTAWEQLETAA"
     gene            2254..2952
                     /locus_tag="EYO87_15750"
     CDS             2254..2952
                     /locus_tag="EYO87_15750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018000633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67419.1"
                     /translation="MQVIRPVGREAAARKYDLLSAMMAHALAGDQNRQRLVLRLMALI
                     TTRYNWQRDELTMGQREMARLWCVDERTVKRDMARLRALGWVVVKRQGVRGRVSVLGL
                     DLDRIMLDTRPVWDHIGPDFVERAGGAKAGDPLPAGDPHDETVVPFRRGRTAPAGDLW
                     GRARQILAAEDPALFQAWLAGLADGGVEAGCLILTAPSRFHATYVRTHLLGRLQMAVR
                     RADASVAQVRVLAG"
     gene            3167..>3691
                     /locus_tag="EYO87_15755"
     CDS             3167..>3691
                     /locus_tag="EYO87_15755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008885420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HIC67420.1"
                     /translation="MTTPSKPSKGKVTASASHRAYDMLRDRLLRFKFMPNQKINENLL
                     ADELRISRTPLREALNRLAAEGLLVSSGRGLSIPGLEPEVVFDLFEARLEIECATVRM
                     ACERATDADLARMSDFLELSMAESPDASVDRLIELDLHFHDTIAKLAGNKVLRQTLCN
                     LNDRIHLIRWIAMEG"
BASE COUNT          616 a         1138 c         1306 g          631 t
ORIGIN      
        1 atccggcccc aggtctcggc gtcgccggtt tcctccagca gcgcgcgata ggccgacagg
       61 cggcgccagc cctggatcag ttcatagcgc ccctcggccg ccggctcgac ccggatcgga
      121 ttcgacaggc cgatatcgcg gatcgaggcg accagttcgg ccagttcgaa atcacccccc
      181 ttggcccggt cgcggatcag cttgtgggtg tcgatcgcct ccagcgggat caggtcggtg
      241 atcaggccgg cgcgtttcag ccgcacatgt tcctgggcca gcgcatcgtt ttcggcccgg
      301 atcccggccg cgatgcgggc gcggtcgcgg ctggattcgg cggtctcggt gatggcggcg
      361 gccatcggcc cgcggcgcgg cgcggcgggg gccggcctat ccgccttccc cgcggggaag
      421 gtctcggccg ggtcgttgtc ctcgggcatc tcgatctcga acatgcggcg tttgcggctc
      481 atgcggcggt ctccaactgc tcccaggcgg tcagcacatg ggttctgaat tcctcgtagg
      541 cctggtcgaa actggcccgc gcgcggcgcc aggtgccgcg cgtcatctcg cgataatcga
      601 tttcgtagat cgagctgaga aagcgccccg attgttcgac ggcgcgggtc atctcgatcg
      661 ggtgacgcgc catccggtcg ccgaagacct ggccgaaggc gtcgaacatg gcgcggtgca
      721 ggtcgttcga gggctcgaac cgggtcatca ggaaacggac atcggcaaag gccttgggca
      781 gcgcgatctt ccccgtgggg aagtcctcga agccgtgcga caggtcttcc agcgcctcgg
      841 ccagctggcc gatgaagctg gtcgtgctgt catattccca gtatccgggg cccgacggga
      901 tatagagcat gtcggccgcg aagaccgcgt tcatcgactg atagccgatc gcgggcgggc
      961 aatcgaacag gatcaggtca taggcatcat cggccagcgc atccagaaag cgcgacaccg
     1021 cgccgaagaa ggtccattcc gggttcaggt gccgatactg ggcgctggcg aattcgacga
     1081 aggcggcatt ggcgcaactg ggcacgatgt cgatcgtgga ccaggccgtg ggcttgatga
     1141 agtcggacgg ccgcagcgag cccaggccca tgtcgcggat cgaggccggc agcttgcgat
     1201 ggggcagggc ggtccccgat tcggcgccgg ccgaggccgc gttcatgcgg tcggtctcgc
     1261 gttccaggtc gcgcgccatg atgccccaga cggtgtgatc ctcgccgata tcggtcaggc
     1321 ccatggaatg ggacagggtg gcctgcgggt cgaaatccac gaccaggatg cgatagccgt
     1381 ccagcgccgc cgcatgggcg aagtgcagcg ccacggtgga cttgccggca ccgcccttga
     1441 aattggcgat ggcggcgcgg aaggcgcgct tgccggccgg gcgcggcggc agcagggatt
     1501 tcttgcccac ccggatgcgg cggcgcaatt cgttgatctc gtccaggctg aaccagcgct
     1561 ggcgcccgtc ctcctcgact tccccgaggg gaaggttcgg gtcggcggcc agcttgccgc
     1621 ggaaggtgga ctggttgatg cggaagatca gatcggccac ctcccagctg gagaaccggc
     1681 gcagggtctt ttccagctcg gggctgaagg tctgccggcg gatccagccc tgcatcttca
     1741 gcgactggct ttgcagccgc gcaaggtcgt cgtgggtata catgttgtgc ctgtctgtcc
     1801 ggacgcaaat cactgtcagt tccgctttta cgccggattt gcgcttttgg caaaaggcat
     1861 ttcttctggg gccggagttt agcgcaaacc cgcccccgtt gcgcgaatcg gccggtcggc
     1921 gtgcgttgcg ccttgcgccg cgcgcgcaac ggattggggg acggcgcgcg gcgcaacacc
     1981 agcgattggg ggacatcccg gccggattgc gggacattca gggcgtcccc caataccaag
     2041 tcctaccatt ctttctgttc gaaacagggc cggaaaggca acggatgatg aagatgcttg
     2101 acagaatcgg aaatgcggac gcaaatacgg caaggatggc gaaaagcgtt tgcggtgaca
     2161 caagatcatc ggatcatgtc cggaccaacc ggacccgacg catcgcccga gaggcgcgaa
     2221 tcaggccggg cgaaccggcg ggcgagggca gcgatgcagg tgatacgtcc cgttggccgc
     2281 gaggcggcgg cgaggaaata cgatcttctt tccgcgatga tggcccatgc gctggccggc
     2341 gatcagaacc ggcagcggct ggtgctgcgg ctgatggcgc tgatcaccac ccgatataac
     2401 tggcagcgcg acgaactgac catgggccag cgcgagatgg cgcggctgtg gtgcgtggat
     2461 gaacgcaccg tcaagcgcga catggcgcgg ctgcgcgcgc ttggctgggt ggtggtcaag
     2521 cggcagggcg tgcgcggccg ggtttcggtg ctggggctgg atctggaccg gatcatgctg
     2581 gatacgcgcc cggtctggga ccatatcggg ccggatttcg tcgaaagggc agggggcgcg
     2641 aaggcgggcg atcccttgcc ggccggcgat ccgcatgacg agacggtggt gccgttccgg
     2701 cgcggccgga cggcgccggc gggtgatctg tggggcaggg cgcggcaaat cctggcggcc
     2761 gaggatccgg ccctgttcca ggcctggctg gcggggctgg ccgatggcgg ggtcgaggcc
     2821 ggatgcctga tcctgaccgc gcccagccgc tttcacgcga cctatgtgcg cacgcatctg
     2881 ctgggccggt tgcagatggc ggtgcgccgc gccgatgcct cggtcgcaca ggtgcgggtg
     2941 ctggccgggt aggggcaccg gcgcggcagc ctatcgacaa gcagggcggg tcaatttagg
     3001 tctcggcttt tagggatcgt cgggggaccg gttcgccacg ggcgatgacc gggggccggc
     3061 caggtccgcg cttcggaccg acacagagac gccgcgatgg atcatcctgc ctgttccgcg
     3121 atcggcagaa gacatcagat gaccgccaga tgcgaggggc gccgccatga ccacacccag
     3181 caagccgtcg aaaggcaagg tcacggcctc ggcatcgcat cgcgcctatg acatgctgcg
     3241 cgaccggctt ttgcgtttca agttcatgcc gaaccagaag ataaacgaaa atctgctggc
     3301 cgacgagctg aggatcagcc ggacgccgtt gcgcgaagcc ctgaaccgcc tcgcggccga
     3361 ggggctgttg gtcagcagcg gccgcggtct ttccattccc ggcctggagc cggaggtcgt
     3421 tttcgacctg ttcgaggcgc ggctggaaat cgaatgcgcc acggtccgaa tggcctgcga
     3481 acgcgccacg gacgcggacc ttgcccgcat gtccgatttt ctcgaattga gcatggcgga
     3541 atcgcccgat gcgtcggttg acaggctgat cgagctggat ctgcattttc acgacaccat
     3601 cgccaagctg gcgggcaaca aggtgctgcg acagaccctc tgcaacctca acgaccgtat
     3661 tcaccttatc cgctggatcg ccatggaagg c
//
LOCUS       DTVW01001190            2425 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2437258, whole
            genome shotgun sequence.
ACCESSION   DTVW01001190 DTVW01000000
VERSION     DTVW01001190.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2425)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2425)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2425
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2437258"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..336
                     /locus_tag="EYO87_15760"
     CDS             <1..336
                     /locus_tag="EYO87_15760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012333419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HIC67421.1"
                     /translation="LKERRRNMGNQLSGGEQQMLAIGRALMTNPHLVVLDEATEGLAP
                     LIRADIWACLARLRQEGEAILVVDKNVDALTKFADRHVVIEKGRVVWTGTTAEILATP
                     EVKDQFLHV"
     gene            356..802
                     /locus_tag="EYO87_15765"
     CDS             356..802
                     /locus_tag="EYO87_15765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008228977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HIC67422.1"
                     /translation="MIPGVTRSNTGIEDISWNILGQTYVPKQKSRSSMAWHATLPEGT
                     FVPPHIHPTQDEFIYVLEGRFDLLLNGVETYAEPGDLIRLPMGIPHGIFNKTDQTIKC
                     LFWVAPTRRLYDLFWALHNLGADANPADVVAISAKHEVDFLPPEEA"
     gene            807..2054
                     /locus_tag="EYO87_15770"
     CDS             807..2054
                     /locus_tag="EYO87_15770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018260108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavin-dependent oxidoreductase"
                     /protein_id="HIC67423.1"
                     /translation="MGILIAGAGIGGLTTALMLHARGLPVEIYEAAREVREVGVGVNI
                     LPHAIRELANLGLLDALDEVGVRTRKLTYLTRSGQEVWSELRGMHAGHEVPQFSIHRG
                     RLQKVLLDAVIARLGKPSLHTGRRLAGFMQDDGGVTAHFTDSVLGGDALSRRGEVLIC
                     ADGIHSAGRRRFYPDEGAPSWQGVVMWRGAADWPVWEDGESMAIGGGLGGKLVLYPIA
                     PAENGTQLMNWVVNVRIKDPAISTPPPDNWSRQVSLAEVLPHALRFHVPGTDIAGLVR
                     KTSAIYEYPMADRDPLPRWTFGRVTLLGDAAHPMYPVGSNGASQAILDARCLADALAQ
                     AEHPRAALWQYEKDRLPKTADVVRTNRVGGPERVIDQVEKRAPAGFKDIEQVLSFEER
                     KAIVGGYANMAGFSRVTSARRAP"
BASE COUNT          460 a          739 c          765 g          461 t
ORIGIN      
        1 ctcaaggaac gccgtcgcaa catgggcaac cagctttcgg gcggcgaaca gcagatgctg
       61 gcgattggtc gggcgctgat gaccaacccc cacctggttg tgctggacga ggcaaccgaa
      121 ggtcttgcgc cgttgatccg ggccgatatc tgggcatgcc tcgcacggct cagacaggag
      181 ggcgaggcaa ttctcgtggt cgacaagaac gtcgatgccc tgacgaagtt cgccgaccgc
      241 catgtggtga tcgagaaggg ccgcgtcgtc tggaccggca ccacggccga gatcctcgcg
      301 acaccggagg tcaaggatca gtttctccat gtctgaagca aaaggagcct cataaatgat
      361 acccggcgtc accagatcaa ataccggtat cgaagacata tcctggaaca ttctgggcca
      421 gacttatgtg ccaaagcaga agtcgcggtc ttccatggcc tggcatgcga ccctgccgga
      481 gggaaccttc gtgcctccgc acatccatcc gacccaggac gagttcatct acgtccttga
      541 aggtcggttc gatctccttc tgaacggcgt ggaaacctat gccgaaccgg gtgatctgat
      601 ccgcctgccc atgggcattc cgcacggaat cttcaacaag accgaccaga ccatcaaatg
      661 cctgttctgg gtggctccga cccgcaggct ctacgatctc ttctgggcgc tgcacaatct
      721 tggtgccgat gccaaccctg cagatgtggt tgcgatttcc gccaagcacg aggtcgattt
      781 cctcccaccc gaggaggctt gagcgaatgg gcatcctgat cgcgggcgcg gggatcggcg
      841 ggttgaccac cgccctgatg ctgcatgcac gcggccttcc agtcgagatt tacgaggccg
      901 cccgcgaggt ccgtgaggtt ggcgtcggcg tcaacatact cccccatgcc atccgcgaac
      961 tggccaacct gggcctgctc gacgcactcg atgaggtggg cgttcggacc cgcaagctga
     1021 cctacctgac aaggtcgggg caggaggtct ggagcgagtt gcgagggatg catgcaggcc
     1081 atgaggtgcc gcaattctcg atccaccgcg gccggttgca gaaggtcctc ctcgacgccg
     1141 tcatcgcgcg actgggcaag cccagcctcc acacgggccg ccggctggcc ggtttcatgc
     1201 aggacgatgg tggcgtgacc gcacatttta ccgatagcgt gctcggcggc gatgccctgt
     1261 cgcgtcgggg agaagtcctg atctgcgccg acggcatcca ttccgccgga cggcgaagat
     1321 tctatcccga cgagggagcg ccctcctggc agggcgtcgt gatgtggcgg ggtgcggcgg
     1381 attggccggt ctgggaggat ggcgagagca tggccatcgg tggcggcctc ggcggcaagc
     1441 tcgttctgta tccgatcgcg cctgcggaaa acggcacgca acttatgaac tgggtcgtca
     1501 acgtgcggat caaggatccg gcgatctcca ctccgccacc cgacaattgg tcgcgacagg
     1561 tgtcgctggc cgaggttctg ccgcatgcgc tgcgctttca cgtgccgggt acggatatcg
     1621 ccgggctggt ccggaagacg tcggcgatct acgaatatcc gatggcggat cgcgatccgc
     1681 tgccgcgctg gacattcggc cgggtcacgc ttctgggtga tgcggcgcat ccgatgtatc
     1741 cggtcggttc gaacggtgcg agccaggcca ttctcgacgc acgctgcctg gcagacgcgc
     1801 tggcccaagc ggagcatccg cgcgccgcgc tctggcaata cgaaaaagac cgactgccca
     1861 agacggcgga tgtcgtacgt accaacaggg tcggtgggcc cgagcgtgtc atcgatcagg
     1921 tcgaaaagcg ggcgccggcc gggttcaagg acattgaaca ggtactctct ttcgaggagc
     1981 gcaaggccat tgtgggcggc tatgccaaca tggccggctt ctccagggtc acctccgccc
     2041 gccgcgcgcc ctgaaggcaa ggctgctgtt tggtactgtc aagtgaacct ggcttgagtc
     2101 cggcagggcg gttttgttgc cgccgcacat gaccaagcgc tcgccctttc gctactgtca
     2161 ctgtacgcta gagcaggttt tatcaacccc gattcattga agggattcgc gagcacagtt
     2221 tgatgtgcga ttctcgcctc acgctatata tggaggcgag tatcatgtca cggggctatt
     2281 cgaaacagtc aatcctcgac acccacgagg cattcctctt gtccttggtc gaggcggagg
     2341 tcgacttccc cggacgcgaa gaaggtcatg cgcagcttca cgaacggtag ggcatcatcc
     2401 gggctacatg atttaccacg gcagc
//
LOCUS       DTVW01001191            2223 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2439187, whole
            genome shotgun sequence.
ACCESSION   DTVW01001191 DTVW01000000
VERSION     DTVW01001191.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2223)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2223)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2223
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2439187"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..426
                     /gene="clpA"
                     /locus_tag="EYO87_15775"
     CDS             <1..426
                     /gene="clpA"
                     /locus_tag="EYO87_15775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352348.1"
                     /note="ATPase and specificity subunit of the ClpA-ClpP ATP
                     dependent serine protease; directs protease to specific
                     substrates; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpA"
                     /protein_id="HIC67424.1"
                     /translation="KREGEDTAAIERTFTPEFRNRLDAVISFAPLSREVVVHVVEKFV
                     LQLEAQLMDRNVHIELTPEAADWLAEKGYDDQMGARPLGRVIQENIKKPLAEELLFGR
                     LMKGGVVRVKIEDDKPAFDITGPDAPRIGKSRTPLLTAD"
     gene            complement(591..>2223)
                     /locus_tag="EYO87_15780"
     CDS             complement(591..>2223)
                     /locus_tag="EYO87_15780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018000212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="penicillin-binding protein"
                     /protein_id="HIC67425.1"
                     /translation="QAAAAEALREALEQYDRGRGLWRGTGKTIPEDQLQDEATWRGAL
                     FATRVPRDIPGWRPAVVLEVGASDARIGIEGIEENQDGHWIVARDVQWARKLDGDSGR
                     PGPRAQVAGDLVSVGDVVLVRPMVSDSDGSFLRWTLRQVPEIEGGFMAMDVNTGRVMA
                     MQGGFSYQSSVFNRATQAMRQPGSSFKPFVYAAALDNNYTPATIVLDEPITLNTPEGL
                     WEPKNAGGRNFGPSPMRTGIEQSRNLMTIRIAQDIGMDRVAEYAERFGAYDRLKPFLA
                     NALGAQETTLFRMVAAYAMFANGGERVEPTLVDRVQDRRGRTIYRHDRRVCETCSREV
                     WPAGEGPVILSNRERVMDAVTAYQLTSMMQGVVKRGSGKGVNLPVPIAGKTGTTNDAK
                     DVWFIGFSSNIVAGCYLGYDQPRTLGANAFGGTLCVPVFNAFMRQAIKEFGGTDFKVP
                     PGGYWVKIDRFTGQRLPDSASGDNVIAEYFRDGTDPDWLSPVVISGFGDATPVLPWEA
                     GSGSRGATSITTSTGKRKVIPRSTDFGTMSSGGLY"
BASE COUNT          385 a          751 c          709 g          378 t
ORIGIN      
        1 aagcgcgaag gcgaggatac ggcggcgatc gagcgcacct tcacgccgga attccgcaac
       61 cgtctggacg ccgtgatcag cttcgcgccg ctgtcgcgcg aggtcgtggt ccatgtggtc
      121 gagaagttcg tgctgcaact ggaagcgcaa ctgatggacc gcaacgtcca tatcgaactg
      181 acccctgagg ccgccgactg gctggcggaa aagggctatg acgatcagat gggcgcgcgt
      241 ccgctgggcc gggtgattca ggagaacatc aagaagcctc tggccgagga attgctgttc
      301 ggacgcctga tgaaaggtgg cgtggtgcgg gtgaagatcg aagacgacaa gcccgccttc
      361 gacatcaccg gtcccgacgc gccgcgaatc ggcaaatcga ggactccgct tttgacggcg
      421 gactgacgcc aacccttgtt ctgacagccg accagaccgc cgggccatcg cccggcggtt
      481 ttttcgttgc cgatcccgga tgcctgggat gaacctgccc tgccccagcc tctgcgtccg
      541 ggcgcggcgc gacggccggg cccagggtct gcgcaacgcg cgcgacggtc tcagtaaagt
      601 ccgcccgagg acatggttcc gaaatcggtg cttcgcggaa tgaccttgcg cttgcccgtc
      661 gaggtggtga tggaggtcgc gccgcgcgag cctgatccgg cctcccacgg cagaaccggc
      721 gtcgcatcac caaatcccga aatcaccacc ggcgacagcc agtcgggatc ggtgccgtcg
      781 cggaaatatt cggcgatgac gttgtcgccc gaggcagaat cgggcaggcg ctgcccggtg
      841 aagcggtcga tctttaccca gtatccgccg gggggaacct tgaaatcggt gccgccgaat
      901 tccttgatgg cctgccgcat gaaggcattg aagaccggca cgcacagggt tccgccaaaa
      961 gcgttcgcgc ccagcgtgcg gggctggtcg taacccagat agcagccggc gacgatgttc
     1021 gaggaaaagc cgatgaacca gacgtccttg gcgtcgttgg tcgtgccggt cttgcccgcg
     1081 atcggcaccg gcaggttcac ccccttgccc gagccacgct tgaccacgcc ctgcatcatc
     1141 gaggtcagct gataggcggt aaccgcgtcc atcacccttt cgcggttcga taagatgacc
     1201 ggcccctctc cggcgggcca gacttcccgg ctgcaggtct cgcagacgcg ccggtcatgg
     1261 cgatagatcg tgcgtccgcg ccggtcctga acccggtcca ccagcgtcgg ttcgacccgc
     1321 tcgccgccat tggcgaacat cgcataggcc gcgaccatgc ggaacagcgt cgtctcctgc
     1381 gcgccaaggg cattggcgag aaagggcttc agccggtcat aggcgccgaa ccgttcggca
     1441 tattcggcga cgcggtccat gccgatatcc tgggcgatgc ggatcgtcat caggttgcgc
     1501 gattgctcga tcccggtccg catcggcgac ggcccgaagt ttcgcccgcc cgcgttcttg
     1561 ggctcccaca ggccctcggg cgtgttcagc gtgatcggtt cgtccagaac gatggtcgcg
     1621 ggggtgtagt tgttgtccag cgcggcggca tagacgaatg gcttgaaact ggatcccggc
     1681 tgccgcatcg cctgggtcgc ccggttgaat accgaagatt gataggaaaa tccgccctgc
     1741 atcgccatga cccgaccggt attgacatcc atcgccatga acccgccctc gatctcgggc
     1801 acctgtcgca gggtccagcg gaggaagctg ccgtcactgt ccgagaccat cggcctgacc
     1861 agcaccacat cgcccaccga aaccagatcg cccgcgacct gcgcgcgcgg tcccggcctg
     1921 ccgctgtcgc catccagctt gcgcgcccat tgcacgtccc tggcaacgat ccagtggccg
     1981 tcctgattct cctcgatgcc ctcgatgccg atccgcgcgt ccgaggcgcc cacctccagc
     2041 acgacggcgg gccgccagcc gggaatgtcg cgcggcacac gagtggcgaa cagcgcgccg
     2101 cgccaggtcg cctcgtcctg caactgatcc tcggggatgg tcttgccggt gccacgccac
     2161 aggccacgtc cgcgatcata ttgctccagc gcctcgcgca gtgcctcggc ggcggcggcc
     2221 tgc
//
LOCUS       DTVW01001192            3982 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2439205, whole
            genome shotgun sequence.
ACCESSION   DTVW01001192 DTVW01000000
VERSION     DTVW01001192.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3982)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3982)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3982
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2439205"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..650)
                     /locus_tag="EYO87_15785"
     CDS             complement(<1..650)
                     /locus_tag="EYO87_15785"
                     /inference="COORDINATES: protein motif:HMM:PF12704.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HIC67426.1"
                     /translation="MPPERRPDMFPLWIKGVLKHRLVQIALAYSGVAIAITLVALIGV
                     FSVISASTMTDRAVSQVVVDWQVQPRPGTDNAGIGAALAALPDLRTVQKVGYGDVSAL
                     SANTGGTVQTTGAAKVLGLDPGYRTDFPEQMRLLLGRYDGPLLAQQTAANLHAGIGDT
                     IIVKAAGGDVPVTIAGIVELPNADALFQTVGAPAGAGPTAPPDNVVILPMAQWTSL"
     gene            complement(640..2052)
                     /locus_tag="EYO87_15790"
     CDS             complement(640..2052)
                     /locus_tag="EYO87_15790"
                     /inference="COORDINATES: protein motif:HMM:PF00005.25"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIC67427.1"
                     /translation="MTLLVAEDLFRFYHVGDAEIRALKGVSLQVRAGEIVALTGPSGS
                     GKSTLLSCLCGLDDPDGGTVEIDGRRMTRRPEAEKAAIRFSLLGIMAQRDNLFAHLTV
                     AENVAFALSRRQGAELPEIGAILQSVGMNARAAAYPATLSGGEIARAGLAVALALDAA
                     LLVADEPTAEVDAQTERLILDMLVARSRAGRGALIATHSRAVEAIATRVLHLRDGRLS
                     ARPAPDGGQAVSPDAERAASPTLRAPLRSSARDNAALIEARHVSRIYHPGGDPVHAVE
                     DASMDLHRGARIAVTGPSGSGKSTLLKMLAGIERPSSGGLSWFGAAKPDMLRPRRIGV
                     VFQEPSLIASLTVRENVELPLQLASFLPARPHPGADDALRLLDLSDLADKLPDELSGG
                     QMQRVAFARALVTNPEIILADEPTGQLDQPTGRAVMQAVLKALDQADAALLMTTHDAA
                     LAATMPTRFHMDHGRLVNAA"
     gene            complement(2049..2651)
                     /locus_tag="EYO87_15795"
     CDS             complement(2049..2651)
                     /locus_tag="EYO87_15795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008522963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67428.1"
                     /translation="MNRRKNLVTTVLAASTIMASLAIPISSVAQGAPLAPRETAVAPE
                     TNPPGDIPDNQVFIDYTAPAGFSMQVPEGWSRSDTATGVSFADKYGTIDIATAKADKA
                     PTPQSIQQRQVPDLVAGGHAVEVTDVRAMTLPAGEAVALDYLSNSAINPVTNRQIRLE
                     NRRIYLFHAGQEAIVTFSAPAGADNVDAWKMMAESLRWPS"
     gene            complement(2935..3321)
                     /locus_tag="EYO87_15800"
     CDS             complement(2935..3321)
                     /locus_tag="EYO87_15800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014239883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1232 domain-containing protein"
                     /protein_id="HIC67429.1"
                     /translation="MEKPEILRRLRDWAGLVKRDVVALYLAARDPRVPWLAKVVAVGV
                     VTYALSPIDLIPDFIPVLGYLDDAILVPLGILLAVRLVPGDVMDDLRAKADRLAALPR
                     SRAGAIAVVVIWAAALAAIAWWFGPF"
     gene            complement(3451..>3982)
                     /locus_tag="EYO87_15805"
     CDS             complement(3451..>3982)
                     /locus_tag="EYO87_15805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018388036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF1003 domain-containing protein"
                     /protein_id="HIC67430.1"
                     /translation="RDYVERLLADERGELADLDRQVIASLEAGEPVSRNPENEAEDTY
                     TFGERLADGVAEFGGSWTFILSFLAVLIFWMLLNVLFLGARPFDPYPFILLNLVLSCL
                     AALQAPVIMMSQRRQEKKDRLRAENDYRVNLKSELEIRQLHEKIDHQLAHQWEKLVEL
                     QQIQIELLEENADGRR"
BASE COUNT          676 a         1288 c         1335 g          683 t
ORIGIN      
        1 aacaggctgg tccactgagc catcggcagg atgacgacgt tgtcgggcgg ggcggtcggc
       61 ccggccccgg cgggggcgcc gacggtctgg aacagcgcgt cggcattggg aagttcgacg
      121 atcccggcga tcgtcaccgg aacgtcgccg ccggcggcct tgacaatgat ggtgtcgccg
      181 atcccggcat gcaggttcgc ggccgtctgc tgggccagaa gcgggccgtc atagcggccc
      241 agaagcaggc gcatctgttc cgggaaatcc gtccggtagc cgggatccag ccccagcacc
      301 ttggccgccc cggtggtctg gaccgtgccg cccgtattcg cgctgagcgc cgagacatcg
      361 ccatagccga ccttctgcac cgtgcgaagg tcgggcaggg cggccaacgc cgccccgatc
      421 ccggcattgt ccgttccggg cctgggctgg acctgccagt ccacgacgac ctgcgacacc
      481 gcccgatcgg tcatcgtcga ggcgctgatg accgagaaga cgccgatcag cgcgaccagg
      541 gtgatggcga tcgcgacgcc cgaataggcc agggcgatct gcacgaggcg gtgcttgagc
      601 acgcctttga tccacagcgg gaacatgtcg ggcctccttt caggcggcat tcaccagtcg
      661 gccgtgatcc atgtggaacc gggtcggcat ggtggcggca agagccgcgt cgtgggtcgt
      721 catcagcagc gcggcatcag cctggtccag ggccttcagg acggcctgca tcaccgcgcg
      781 ccctgtcggc tggtcaagct gtccggtcgg ctcgtcggcc agaatgattt cgggattggt
      841 gacgagggcg cgggcaaagg cgacccgctg catctgcccg cccgacaatt cgtcgggcag
      901 cttgtcggcc agatcggaca gatccagcag gcgcagcgca tcatcggcgc ccggatgcgg
      961 gcgggcggga aggaacgacg ccaattgcag cggcagttcg acattctcgc gcacggtaag
     1021 cgacgcgatc aggctgggtt cctggaacac gacgccgatc cggcgggggc gcagcatgtc
     1081 gggtttggcc gcgccgaacc acgacaaccc gcccgagctt ggccgttcga tccccgccag
     1141 catcttcagc agagtggatt tgccgctgcc cgacgggccg gtgacggcga tccgggcgcc
     1201 ccggtgcagg tccatgctgg catcctcgac ggcatggacc ggatcgccgc cgggatgata
     1261 aatccggctt acatgccgcg cctcgatcag cgcggcattg tctctggcgg aggatcgcag
     1321 gggcgcgcgc aaggtcgggc tggccgcccg ctctgcatcg ggcgagaccg cctgaccgcc
     1381 atcgggcgcg gggcgcgcgg acagccgtcc gtcgcgcagg tgcaggacgc gcgtggcgat
     1441 ggcttcgacc gcgcggctat gcgttgcgat caacgccccg cgaccggcgc ggctgcgtgc
     1501 gaccagcatg tccaggatca gccgttcggt ctgtgcatcg acctctgcgg tcggctcgtc
     1561 cgccaccagc agggccgcat caagcgccag cgcgaccgcc agccccgcgc gcgcaatctc
     1621 gccccccgac agggtggcgg gataggcggc cgcgcgggcg ttcatgccga cggattgcag
     1681 gatggccccg atttcgggca gctccgcgcc ctgtctgcga gacagggcga aggcgacgtt
     1741 ttcggcgacc gtcagatgcg cgaacaggtt gtcgcgctgc gccatgatgc ccagcaacga
     1801 gaaccggatc gccgcctttt ccgcctcggg gcgccgggtc attcggcggc cgtcgatctc
     1861 gaccgtgccg ccatcggggt cgtccagccc gcacaggcag gagagcagcg tcgatttgcc
     1921 actgcccgaa ggaccggtga gggccacgat ctcgcccgcg cgaacttgca gactgacgcc
     1981 cttgagcgca cggatctcgg cgtcgccgac atggtagaac cggaacaggt cttcggcgac
     2041 aagcagggtc acgacggcca ccgcagcgat tccgccatca tcttccacgc atcgacgttg
     2101 tcggcgccgg cgggggccga aaaggtgacg attgcctcct gcccggcatg gaacagatag
     2161 atgcggcggt tttccagccg gatctgtcgg ttggtcaccg ggttgatcgc agagttcgac
     2221 agatagtcca gtgcgaccgc ttccccggcg ggcagcgtca tggcccggac atcggtcacc
     2281 tcgaccgcgt gcccgccggc gaccagatcg gggacctggc gctgctggat ggactgcggc
     2341 gtgggcgcct tgtcggcctt ggccgtggcg atgtcgatcg tgccgtattt gtcggcgaag
     2401 ctgacccccg tggcggtgtc gctgcgcgac cagccctcgg gcacctgcat cgagaaacct
     2461 gcgggcgcgg tataatcgat gaagacctga ttgtcgggaa tgtcgcccgg cggattggtc
     2521 tcgggggcga cggcggtctc gcgcggtgcc agcggcgcac cctgcgcgac gctgctgatc
     2581 gggatcgcca gcgacgccat gatggtgctt gccgcaagaa cggtcgtcac aaggtttttt
     2641 cgacggttca tcattctgtt tccttcttgc cggggcttgc ctggctgcgt cccggtttct
     2701 ctgcgcaacc attgaggaca ggttgaaacc gcagcgatga ccggaaactg tagcggccga
     2761 ttgccctttc gccgatgttt atagatcgcg gatctgcgcg ggatctgtcc gccatattgc
     2821 aaatttgtaa ggccgggctt ctgctcgccg cctgctttca gggcgctgcg ggccgggggc
     2881 tatcggcccc aggcgcatga tctgcaacgg aggaaatcac ccttggcgac ggttctagaa
     2941 ggggccgaac caccaggcga tggcagcaag ggcggcagcc cagatcacaa cgaccgcgat
     3001 tgcacccgcg cgacttctgg gcagggctgc cagtctgtcc gccttggccc tgagatcgtc
     3061 catcacgtca cccggcacca ggcggacagc cagcaaaatc ccaagcggaa cgaggatggc
     3121 atcgtcgaga tagcccagca ccggaataaa atccgggatc aggtctatcg gactgagtgc
     3181 ataggtgacg acgccgacgg cgacaacctt cgcaagccac ggaacacggg gatcgcgggc
     3241 cgccaggtag agcgccacga catcgcgctt taccagacca gcccagtccc gcaaccgcct
     3301 caggatctcg ggtttttcca tgcaattcct gcggcccggt tcggtaccgg ccttgaaaga
     3361 cgaagaacat gcccgcgcag ttcaaggtca atccctccgg atgatttgag cggcagcggt
     3421 tcaccgggat acagcgttga gcatccttta tcatcggcgg ccatcggcgt tttcctccag
     3481 cagttcgatc tggatctgct gcaattcgac cagcttttcc cattggtggg caagctgatg
     3541 gtcgatcttt tcgtgcaatt gccggatttc cagttcggat ttgaggttga cgcgataatc
     3601 gttctcggcc cgcagacggt cctttttctc ctgccggcgc tggctcatca tgatcaccgg
     3661 cgcctgaagg gcggccagac aggacaggac gaggttcagc aggatgaagg gatagggatc
     3721 gaacggcctg gcgccgagga acagaacgtt cagcagcatc cagaagatca gcacggccag
     3781 aaaggacagg atgaaggtcc agctgccgcc gaattcggcc acgccgtcgg caagcctctc
     3841 gccgaacgtg taggtgtcct ctgcctcgtt ctcggggttg cgcgataccg gttcgcccgc
     3901 ttcgaggctg gcgatcacct gccggtcaag atcggccagt tcgccgcgtt cgtcggccag
     3961 cagccgttcg acataatccc gt
//
LOCUS       DTVW01001193            2688 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2440646, whole
            genome shotgun sequence.
ACCESSION   DTVW01001193 DTVW01000000
VERSION     DTVW01001193.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2688)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2688)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2688
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2440646"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1374)
                     /locus_tag="EYO87_15810"
     CDS             complement(<1..1374)
                     /locus_tag="EYO87_15810"
                     /inference="COORDINATES: protein motif:HMM:PF00005.25"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HIC67431.1"
                     /translation="MTPLLTIATLFWRDQRRAILRGFALSAAVALSGIMLLALSGWFI
                     LAAGMAGLAGLGTVFDVFRPSAGIRFLAIARTGSRYGERLATHDATLKVLAGLRVRLL
                     DGLSRADFTLQSRLRGGQALNRLTADVDALDGLAIRLVFPLLALLIAALAVLTGLWLL
                     VAPSVALWVAGATFSGAVAVLAWAGKAAFGPSSEAEARRQALRSATVDHLRGRDWLAV
                     AGRLTAARETVLSQDRRARAAALAQARIEHRATAALQAAGAMTLAGTLWLAGRLAMQA
                     QITAPQAALAVFAALAMGELALALQRGIAELGRMRGAAARIAPLLEPRSAPAAPDVSG
                     PAGLALTCLAVAAAPGLPPVVTGLDLSVAPGETVALKGVSGRGKTSLLNAVAGLVPPV
                     QGEIRRGGTIGYLTQRPALVAGSLRDTLRMAAPAASETDLRAVLDCCRLDLPLDHVLG
                     EGGAGLSG"
     gene            complement(1371..2654)
                     /locus_tag="EYO87_15815"
     CDS             complement(1371..2654)
                     /locus_tag="EYO87_15815"
                     /inference="COORDINATES: protein motif:HMM:PF00005.25"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HIC67432.1"
                     /translation="MLVDKIEMLRPYLLRWHPVRARVAVMPLLILSVSTGLSWAAGLI
                     LAISGTVIPMFMALIGLAARDAAKRQMDEISDLNALMLDRIGALVDIRLLGARRAMLA
                     DFTLRADRLRARTMAVLRVAFLSGAVLELFAALGVAMMAVFVGFTLLGALDFGTWGRD
                     LGLAEAIFLLLMAPAYFQPLRDMAAAWHDRIAAQAVARDLLADAAVPVPAILGAGHAG
                     RALAGTVTTHGLVLRGHALPDLIIAPGEGVALTGPSGAGKSALLLAIAGLLPGYGALR
                     IDGVPLGQSNADDWRAALALIPQKPHFRDVSLREELTSGRPATPGAIADALRLADAQG
                     IVARLPDGLETRLGESGAGVSGGEARRLTIARAALRRPALILADEPTADLDDGTAEAV
                     IAGLLEMHRKGATLVVASHDARLIKALPRRIEVGR"
BASE COUNT          456 a         1022 c          914 g          296 t
ORIGIN      
        1 gcccgaaagc ccggcgccgc cctcgcccag aacgtgatcc agcggcagat cgagccggca
       61 gcaatccagc acggcgcgca gatccgtctc ggacgccgcg ggcgcggcca tccgcagcgt
      121 gtcccgcaga ctgccggcca cgagggcggg cctctgggtc aggtagccga tggttccccc
      181 gcgacggatt tcgccctgca cggggggaac cagccccgcg acagcgttca gaagactggt
      241 cttgccccgc ccgctgacgc ctttcagcgc gaccgtctcg cccggtgcga cagacaggtc
      301 cagcccggtc acgaccggcg gcagaccggg cgcggcggcc acggcaagac acgtcagggc
      361 cagcccggcc ggccccgaca cgtccggggc ggcgggcgcg gatcgcggtt ccagcagcgg
      421 cgcgatgcgg gcggcggcgc cgcgcatccg acccagttcg gcgatgccgc gctgcagcgc
      481 cagggccagt tcgcccatcg cgagggccgc gaaaaccgcc agggcggcct gcggggccgt
      541 gatctgcgcc tgcattgcca ggcgtcccgc cagccacaat gttcccgcca gcgtcatggc
      601 accggcggcc tgcaaggccg cggtggcgcg atgttcgatc cgcgcctgtg ccaaggccgc
      661 ggcgcgtgcc ctgcgatcct gcgacagaac ggtttcgcgc gcagcagtca gccggcccgc
      721 cacggccagc cagtcgcgac cgcgcaaatg atcgaccgtg gccgagcgca gcgcctgtcg
      781 tcgcgcttcg gcctcggacg agggaccgaa agccgccttg ccggcccatg ccagcaccgc
      841 gaccgcgccg gaaaaagtcg cccccgcgac ccacagcgcg accgagggtg cgaccagcag
      901 ccacagaccg gtgaggaccg caagcgccgc gatcagcagg gccagcagcg gaaagaccag
      961 ccggatcgcc aggccatcca gcgcatcgac atccgccgtc agccgattca gcgcctgccc
     1021 gcccctgagc cgcgattgca gcgtgaagtc ggcccgtgac agcccgtcca gcaaccgcac
     1081 ccgcaacccg gccagaacct tcagcgtggc gtcatgcgtg gccaggcgtt cgccgtatcg
     1141 gctgccggtg cgggcaatgg cgaggaaccg gatcccggcc gagggacgga acacgtcgaa
     1201 caccgtcccc agcccggcca gcccggccat gcccgcggcc aggatgaacc agcccgacag
     1261 cgccagaagc atgataccgc tgagagccac ggcggccgac agcgcgaagc cgcgcaggat
     1321 cgcgcggcgc tggtcgcgcc agaacagcgt cgcgatcgtc agcagcggtg tcatcgtcca
     1381 acctcgatcc ggcgcggcag cgccttgatg agccgcgcat catggctggc cacgaccagc
     1441 gtggcaccct tgcggtgcat ttccagaagc ccggcgatga cggcctcggc ggtgccatcg
     1501 tccagatcgg ccgtcggctc gtcggccagg atcagcgccg gcctgcgcag ggcggcgcgg
     1561 gcgatggtca gccgccgcgc ctcgccgccc gagacaccgg cgccgctttc ccccaggcgc
     1621 gtctccaacc cgtctggcaa acgcgcgaca atgccctggg cgtcggccag gcgcagcgca
     1681 tcggcgatgg caccgggagt tgcgggccgg ccggaggtca gttcctcccg caggcttaca
     1741 tcgcggaaat gcggcttttg cgggatcagc gccagtgccg cgcgccagtc gtcggcgttg
     1801 ctttgaccaa gcggcacccc gtcgatccgc agcgcgccat agcccggcaa cagcccggca
     1861 atcgccagca gaagcgccga tttgcccgcg cccgagggac cggtcagcgc caccccctcg
     1921 cccggcgcga tgatcaggtc gggcagcgca tggccgcgca gcaccagccc atgcgtggtg
     1981 acggtgccgg caagcgccct gcccgcatgg cccgcgccca gaatcgcggg cacgggcacg
     2041 gcggcatcgg ccagcagatc gcgggcgacg gcctgggccg cgatccggtc atgccaggcg
     2101 gcggccatgt cgcgcagggg ctgaaaatag gccggggcca tcagcagcag gaatatcgcc
     2161 tcggccagcc caagatcgcg gccccaggtg ccgaaatcca gcgcgcccag cagcgtgaag
     2221 cccacgaaga cggccatcat cgccacacca agcgccgcga acagttccag caccgcaccg
     2281 gacaggaagg cgacgcgcag gacggccatc gtgcgcgccc gcagccggtc ggcgcgcaac
     2341 gtgaaatccg ccagcatcgc ccgccgcgcg cccagcaggc ggatatccac cagcgcgccg
     2401 atccggtcca gcatcagcgc attcagatcc gagatctcgt ccatctgccg tttcgcggca
     2461 tcccgcgccg ccagaccgat cagcgccatg aacatcggga tcaccgtccc gctgatggcc
     2521 aggatcagcc ccgccgccca ggacaggccg gtgctgaccg acaggatcag caagggcatc
     2581 accgccacgc gggcacgaac cgggtgccag cgcagcagat agggtcgcag catctcgatc
     2641 ttgtccacca gcaaggcggc ggttgccgcg gacgagggcg cggcggcc
//
LOCUS       DTVW01001194            2581 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2442912, whole
            genome shotgun sequence.
ACCESSION   DTVW01001194 DTVW01000000
VERSION     DTVW01001194.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2581)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2581)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2581
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2442912"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..745
                     /gene="dapD"
                     /locus_tag="EYO87_15820"
     CDS             <1..745
                     /gene="dapD"
                     /locus_tag="EYO87_15820"
                     /EC_number="2.3.1.117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008282421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
                     N-succinyltransferase"
                     /protein_id="HIC67433.1"
                     /translation="VREAVEETLKALDSGALRVAERRGADWHVNQWAKKAVLLSFRLN
                     DMEQMSGGPQGGGWWDKVPSKFEGWGDNQWRAAGFRAVPGAIVRRSAFIGKGAVLMPS
                     FVNLGAHVGEGTMVDTWATVGSCAQIGRNVHLSGGVGIGGVLEPLQAGPTIIEDECFI
                     GARSEVVEGCIIREGSVLGMGVFIGQSTRIVDRETGNVMYGEVPAGSVVVAGSMPSKN
                     GVNLYCAVIVKRVDAKTRAKTSVNELLRD"
     gene            742..1191
                     /locus_tag="EYO87_15825"
     CDS             742..1191
                     /locus_tag="EYO87_15825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008758926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YaiI/YqxD family protein"
                     /protein_id="HIC67434.1"
                     /translation="MTLFIDADACPVKAEAERVATRLHVPMVLVCNGGLRMPAHPLVS
                     LKIVAEGPDEADRWIADQCGPGDVVVTSDLPLADRCLKAGAQVVRHDGEVLTASNIGP
                     RLASRDLMADIRAADPFHQGGGRTFGKADRARFLQSLDGLLVKALRR"
     gene            complement(1263..2189)
                     /locus_tag="EYO87_15830"
     CDS             complement(1263..2189)
                     /locus_tag="EYO87_15830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AEC family transporter"
                     /protein_id="HIC67435.1"
                     /translation="MLAVFLKTLPFFGLIGLGWMAARTRFFPEQAAAWLTKFVFFFAL
                     SAMLFRFAANLDLAALFDPRFVSAYLSGSALIWLTGFAVARARALPTPEAAMEAQCCM
                     IGNTGFLGVPMLVMLLGPQAVGPVLMVLVIDMLVFSTLITLIIHAARSGGLRLTTVLP
                     VLRGIVANPMILSMAAGLVWSGLRLPMPGPLDEFLVLLGAAATPGALFAIGASLAGRQ
                     ARRLAASGWLGFAKLVLHPSAVGIAAWLLGVQPFAAGVMIAAAALPVAGNVYILAQYF
                     GVAQQRVSAAILISTIGSIATFPLIMALTGQT"
     gene            complement(2189..>2581)
                     /locus_tag="EYO87_15835"
     CDS             complement(2189..>2581)
                     /locus_tag="EYO87_15835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018301057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HIC67436.1"
                     /translation="FYAGGGGDAWLAALEPVGTGPDKPHLTAAPWLIVVFAQRYGMRD
                     GQRHKHYYVPESVGIACGMLIAAIHHAGLVTLEHTPNPMKFLNHLCARPDSEKPVMIL
                     PVGLPADDATVPAAAKQKKALSEIMSVF"
BASE COUNT          455 a          819 c          914 g          393 t
ORIGIN      
        1 ggtgcgcgag gccgtcgagg aaacgctgaa ggcgctggat tcgggtgcgt tgcgcgtggc
       61 cgaaaggcgc ggcgccgact ggcatgtgaa ccaatgggcc aagaaggcgg tgctgctgtc
      121 ctttcgactg aacgacatgg aacagatgtc gggcgggccg cagggcggcg gctggtggga
      181 caaggtcccg tcgaaattcg agggctgggg cgacaatcaa tggcgcgcgg ccgggttccg
      241 cgcggttccg ggtgcgatcg tgcggcgcag cgccttcatc ggcaagggcg cggtgctgat
      301 gccttccttc gtcaacctgg gcgcgcatgt gggcgaggga accatggtcg atacctgggc
      361 cacggtcgga tcctgcgccc agatcggccg caacgtccac ctgtcgggcg gcgtcggaat
      421 cggcggcgtg ctggagccgt tgcaggccgg cccgaccatc atcgaggatg aatgtttcat
      481 cggcgcgcgt tccgaggtgg tcgagggttg catcatccgc gaaggctcgg tcctggggat
      541 gggcgtgttc atcggccagt cgaccaggat cgtcgatcgc gagacgggca atgtcatgta
      601 tggcgaggtg ccggccggtt cggtcgtcgt cgcggggtcc atgccttcga agaacggcgt
      661 gaacctgtat tgcgcggtca tcgtcaagcg ggtggatgcg aagacgcggg ccaagacctc
      721 ggtcaacgaa ttgctgcgcg attgacgctt ttcatcgacg ccgatgcctg cccggtcaag
      781 gccgaggccg aacgggtcgc gacccggctg cacgtgccga tggtgctggt ctgcaatggc
      841 gggctgcgga tgcccgccca tccgctggtc agcctgaaga tcgtggccga aggcccggac
      901 gaggcggacc ggtggattgc ggatcaatgc gggccgggcg atgtggtggt gacctcggat
      961 ctgccgctgg cggatcgctg cctcaaggcc ggggcacagg tcgtccggca tgacggcgag
     1021 gtactgacgg cgtcgaatat cgggccgcgc ctggccagcc gcgatctgat ggccgacatt
     1081 cgcgcggccg acccgtttca tcagggcgga ggccggactt tcggcaaggc ggaccgggca
     1141 cggttcctgc aatcgctgga cggcctgctg gtgaaggctc tgcgccgcta gcgggtgcgc
     1201 gcctgtttgt cgttcgctgc ctgtgccgcc tttcatggcc ggtgcagggc ggagccggtc
     1261 ggtcaggtct ggccggtcag ggccatgatc agcggaaagg tcgcgatgct gccgatggtc
     1321 gagatcagga tcgcggccga gacccgctgc tgcgccaccc cgaaatactg cgcaagaata
     1381 tagacattgc ccgccaccgg cagcgccgcg gcggcgatca tcacgcctgc ggcgaagggc
     1441 tggaccccca gcagccaggc cgcgattccc accgctgacg gatggagcac cagcttggcg
     1501 aaaccaagcc agcccgacgc cgccagtcgc cgcgcctgcc ggcccgcaag gctggcgccg
     1561 atggcaaaca gcgcgcccgg cgtcgccgcc gcgcccagca gaaccaggaa ttcgtccagc
     1621 ggtccaggca tgggcaggcg caggccggac cagaccagcc ccgccgccat cgacaggatc
     1681 atcggattgg ccacgatccc gcgcagcacg ggcagcacgg tcgtcagccg cagcccgccg
     1741 ctgcgcgcgg cgtggatgat cagcgtgatc agcgtcgaaa acaccagcat gtcgatgacc
     1801 agaaccatca gaaccggacc cacggcctgt ggacccagca gcatgaccag catcggcacg
     1861 cccagaaagc cggtattgcc gatcatgcag cattgcgcct ccatcgctgc ctcgggcgtg
     1921 ggcagcgctc gggcgcgggc caccgcgaag ccggtcagcc agatcagcgc cgagcccgac
     1981 agataggccg aaacgaagcg cggatcgaac agtgccgcca gatcgagatt cgccgcaaag
     2041 cggaacagca ttgccgacag ggcgaagaag aagacgaatt tcgtcagcca ggcggccgcc
     2101 tgttcgggga aaaagcgggt ccgggcggcc atccagccca gtccgatcag cccgaagaaa
     2161 ggcagcgtct tcaggaatac ggccagcatc agaagacgga catgatctcg gacagcgcct
     2221 tcttctgctt ggcggcggcc ggcaccgtcg catcatcggc gggcaggccc accggcagga
     2281 tcatcaccgg cttttcgctg tcgggccgag cgcatagatg attcaggaac ttcatcgggt
     2341 tgggcgtatg ctccagcgtt accaacccgg cgtgatggat cgcggcgatc agcatcccgc
     2401 aggcgatgcc gacgctttcg ggaacgtaat aatgcttgtg tcgctggccg tcgcgcatcc
     2461 cgtatcgctg ggcgaagacg acgatcagcc agggcgcggc ggtcagatgc ggcttgtcgg
     2521 gcccggttcc caccggctcc agcgccgcca gccaggcatc gccgccgccg ccggcataga
     2581 a
//
LOCUS       DTVW01001195            1071 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2445679, whole
            genome shotgun sequence.
ACCESSION   DTVW01001195 DTVW01000000
VERSION     DTVW01001195.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1071)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1071)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1071
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2445679"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..566)
                     /locus_tag="EYO87_15840"
     CDS             complement(<1..566)
                     /locus_tag="EYO87_15840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005853800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 3 protein"
                     /protein_id="HIC67437.1"
                     /translation="MAPNATILGGIAGTSLTTGERSFFRQADPWGFILFGRNVDDPDQ
                     LRRLTGDLREAVGRDAVITVDQEGGRVQRLRAPHWMEWPAPLDQAPAGPRAMWLRHYL
                     IGRELRDCGIDSDCAPTLDVAQPDTHPFLRNRCLGTDPQTVAELGRAAADGLLAAGVL
                     PVVKHMPGHGRAAADSHSDLPVVTAPLA"
     gene            complement(566..>1071)
                     /locus_tag="EYO87_15845"
     CDS             complement(566..>1071)
                     /locus_tag="EYO87_15845"
                     /inference="COORDINATES: protein motif:HMM:PF05036.11"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SPOR domain-containing protein"
                     /protein_id="HIC67438.1"
                     /translation="PVIEGSVNEALTDENGVPAQTDAINAALAQAQAAANLGAIVASP
                     RPAPRPRITRLASAGTMATDAAPAAPARRPAEPTAKPAVDTGSGPLVQLGAFDSNAIA
                     NGEWNRLSGKFGSLFSDKGQVIQKYDSNGRTFWRLRVAGFSSISDARQFCSAVKSGGT
                     DCIALSR"
BASE COUNT          162 a          362 c          387 g          160 t
ORIGIN      
        1 tcggccagtg gcgcggtgac cacgggcagg tcgctgtggc tgtcggcggc agccctgcca
       61 tgtccgggca tgtgtttcac aaccggcagc actccggcag ccagcaggcc atcggcggca
      121 gcgcggccca gttcggcgac ggtttgcgga tcggttccga gacagcggtt gcgcaggaag
      181 ggatgagtgt cgggctgcgc cacatccagc gtcggcgcgc aatccgaatc gatgccgcaa
      241 tcgcgcaatt cgcgcccgat caggtagtgt cgcagccaca tggcgcgcgg cccggccggg
      301 gcctgatcca gcggtgcggg ccattccatc caatgcggcg cccgcaggcg ctggacgcgg
      361 ccgccttcct gatcgacggt gatcaccgcg tcgcggccca cggcctcgcg cagatcaccg
      421 gtcaggcggc gcagctggtc agggtcgtcc acgttgcggc cgaacaggat gaagccccac
      481 ggatcggctt ggcggaaaaa ggaccgctcg cccgtcgtga ggctggtccc ggcgatgccg
      541 ccgaggatcg tcgcgttcgg cgccatcagc gcgacagcgc gatgcagtcc gtgccgcccg
      601 atttgaccgc cgaacagaat tggcgcgcat cgctgatcga ggaaaagcct gccacgcgca
      661 accgccagaa ggtgcggccg ttcgaatcgt atttctggat cacctgcccc ttgtccgaga
      721 acagcgagcc gaacttgccc gaaaggcggt tccattcgcc gttggcgatg gcattgctgt
      781 caaaggcgcc aagctggacc agcgggccgc tgccggtatc gacggccggc ttcgcggtcg
      841 gctcggccgg gcggcgggcc ggggccgccg gcgccgcgtc ggttgccatc gtgccggccg
      901 aggccagacg ggtgatgcgc gggcgcggag ccggacgggg cgaggccaca atggcgccaa
      961 gattggccgc ggcctgcgcc tgcgccagag ccgcgttgat cgcatcggtc tgcgcgggga
     1021 cgccgttctc gtcggtcagc gcctcgttga ccgatccctc gatcacgggc a
//
LOCUS       DTVW01001196            1030 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2446646, whole
            genome shotgun sequence.
ACCESSION   DTVW01001196 DTVW01000000
VERSION     DTVW01001196.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1030)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1030)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1030
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2446646"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..775)
                     /locus_tag="EYO87_15850"
     CDS             complement(<1..775)
                     /locus_tag="EYO87_15850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009504606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HIC67439.1"
                     /translation="MEFLAPVSLLLAGLLVVGMPIGFAMGIAGTVGLYLIGGLNLALG
                     ILSVAPYRNTASWLLTAIPLFILMAEILSASRISSDMFRAANRWVGHLPGGLAVATVF
                     TSAGFGAVSGSSTAATATMARTVAPEAEKYGYDRGMIVGTVAAAGTLSIMIPPSVVLM
                     VYGIITETSIGGLFIAGILPGLITALSFAGITMVWATLNRDLAPPVQSHGWRERFASL
                     RDIWPVVLLFVFVVAGIYSGAVTVTEAAAVGCFGAIMIAA"
     gene            complement(778..1029)
                     /locus_tag="EYO87_15855"
     CDS             complement(778..1029)
                     /locus_tag="EYO87_15855"
                     /inference="COORDINATES: protein motif:HMM:PF04290.10"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease subunit"
                     /protein_id="HIC67440.1"
                     /translation="MRAGFNVVLRLAAAAFFALICYGASREALKAWDFGYRTSGDIDA
                     PLVTTLVIAPIGCVLIVLRLLVNAAGDVQHLRGASDRIG"
BASE COUNT          249 a          339 c          311 g          131 t
ORIGIN      
        1 cggcggcaat catgatcgcg ccaaagcagc cgaccgcggc ggcttcggtc acggtgacag
       61 cgccagaata aatcccggcc acgacaaaga cgaacagcag aaccaccggc cagatgtcgc
      121 gcagtgacgc gaagcgctca cgccacccat ggctttgcac tggtggcgcc agatcgcggt
      181 tcagcgtcgc ccagaccatc gtgatcccgg caaagctgag cgcggtaatg agacccggca
      241 gaatgccggc aatgaacagc ccgccgatcg aggtttcggt gatgataccg taaaccatca
      301 gcacaaccga aggcgggatc atgatcgaca acgtcccggc ggccgcaacc gtgcctacga
      361 tcatgccgcg gtcatagcca tatttctcag cctcgggcgc gacggtgcgc gccatcgtgg
      421 ccgtcgccgc ggtggacgag cccgaaaccg ccccgaagcc tgcgctggta aagaccgtgg
      481 ccacggccag tccgccgggc aaatggccca cccacctgtt ggcggcgcgg aacatgtccg
      541 acgaaatccg actggccgac aggatctcgg ccatcaagat gaacaaggga atggcggtca
      601 acagccaaga ggcggtgttg cgatacgggg ccaccgacag gatgccgagc gccagattga
      661 gcccgccgat cagatacagg ccgacggtgc cggcgatgcc catcgcgaag cctatcggca
      721 tcccgacgac gagaagcccc gccagcaata gcgacacagg tgcaagaaat tccatactca
      781 gccaatccga tccgaagcgc cgcgaaggtg ctgaacgtca cccgccgcat ttacgagaag
      841 gcgcagaacg atcagcacgc agccaatcgg cgcaatcaca agcgtggtga cgagaggcgc
      901 gtcgatgtcg ccggatgtgc gatatccgaa gtcccacgcc ttaagcgcct cgcgcgaggc
      961 accgtaacag atcagcgcaa aaaacgcggc cgctgccaat cgcaagacga cattgaaacc
     1021 ggcccgcagc
//
LOCUS       DTVW01001197            1470 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2447267, whole
            genome shotgun sequence.
ACCESSION   DTVW01001197 DTVW01000000
VERSION     DTVW01001197.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1470)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1470)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1470
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2447267"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..269
                     /locus_tag="EYO87_15860"
     CDS             <1..269
                     /locus_tag="EYO87_15860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010393258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="cation-efflux pump"
                     /protein_id="HIC67441.1"
                     /translation="QDLMRVIRETIADRAEGAIEAHDLRTRQAGSATFIDFHLVVDGA
                     TSVSEAHQICDRIETALKAKLTEAQITIHVEPDNKAKHAGILVL"
     gene            complement(303..1088)
                     /gene="xth"
                     /locus_tag="EYO87_15865"
     CDS             complement(303..1088)
                     /gene="xth"
                     /locus_tag="EYO87_15865"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011747268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HIC67442.1"
                     /translation="MKIASFNINGVKARIGALTGWLAGADADVVVLQEIKSVDEGFPR
                     DHFEDLGWNVETHGQKGFNGVAILSKLPLEDVRRGLPGGEGDEQARYIEATVTGSEAV
                     RIAGLYLPNGNPAPGPKYDYKLAWMERLRLRAARFLAEEMPVVMLGDFNVIPEPRDAA
                     HPKNWVSDALFLPESRAALRRIVHQGWTDAIRIRDPWSARGPFTFWDYQAGAFDRDDG
                     IRIDHLLLSPQAADLLIETGVDREARAGEKPSDHVPVWVRLAA"
     gene            complement(1152..>1470)
                     /locus_tag="EYO87_15870"
     CDS             complement(1152..>1470)
                     /locus_tag="EYO87_15870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HIC67443.1"
                     /translation="QDLMEELAKIVRVIRKKDPSAPHNTLLVLDATTGQNALSQVETF
                     RRLADVSGLVMTKLDGTARGGVLVALADRFGLPIHAIGVGEQIDDLDAFDAGDFARAL
                     VGL"
BASE COUNT          268 a          500 c          458 g          244 t
ORIGIN      
        1 cgcaagatct gatgcgtgtc atccgcgaga cgatcgcgga tcgcgccgag ggtgcgatcg
       61 aggcccatga tctgcggacc cgccaggccg gatccgcgac cttcatcgac tttcatctgg
      121 tcgtggatgg tgcgaccagc gtgtccgagg cacaccagat ctgcgaccgg atcgaaacgg
      181 cgctgaaggc caaactgacc gaggcccaga tcaccatcca tgtcgaaccc gacaacaagg
      241 cgaaacatgc cggtatcctg gtgctctagg cgacgcgcgc cagccgcgcg ccggacgcgc
      301 ggtcaggcag ccagcctgac ccagaccggc acgtgatcgc tgggcttttc gcccgcccgc
      361 gcctcgcggt ccacacccgt ctcgatcagc aggtcggcag cctgcggcga cagcagcagg
      421 tggtcgatac ggatcccgtc gtcccggtcg aaggcgcccg cctgataatc ccagaaggta
      481 aaggggccgc gcgctgacca gggatcgcgg atgcggatgg catcggtcca gccctgatgg
      541 acgatccggc gcagggcggc gcggctttca ggcaggaaca gcgcgtcgct gacccagttt
      601 ttcggatgag cggcgtcgcg cggctcggga atgacattga aatcgcccag catcaccacc
      661 ggcatttcct ctgccagaaa acgggcggcg cgcaggcgca ggcgttccat ccaggccagc
      721 ttgtaatcgt atttcggtcc cggcgcagga ttgccgttgg gcagatacag gcccgcaatc
      781 ctgaccgcct cgctgcctgt caccgtcgct tcgatatagc gcgcctgttc gtcgccctcg
      841 ccgcccggca gtccgcggcg cacatcctcc agcggcagtt tggacaggat cgcaaccccg
      901 ttgaagccct tctggccgtg ggtttcgaca ttccagccca gatcctcgaa atggtcgcgc
      961 gggaaaccct cgtccacgga cttgatctct tgcaggacga cgacatcggc gtcggccccc
     1021 gccagccagc cggtcagcgc cccgatccgc gccttgacac cattgatgtt gaaggatgcg
     1081 atcttcatgg ccgcaatcta gatcaccgag gcgcaggtcc gcaaccagat gcggcgttcc
     1141 ggatccgtag cctaaaggcc gaccagggcg cgggcgaaat cccccgcatc gaaggcgtcg
     1201 agatcgtcga tctgctcgcc cacgccgatg gcgtgaatgg gcaggccgaa ccggtcggcc
     1261 agggcgacca gaacgccgcc ccgcgcggtt ccgtccagct tggtcatcac cagacccgag
     1321 acatcggcca gcctgcggaa tgtctcgacc tggctcagcg cattctgacc cgtggtcgca
     1381 tccagaacca gcagcgtgtt atgcggggcc gagggatcct ttttgcggat gacgcggacg
     1441 atcttggcca gttcctccat cagatcctga
//
LOCUS       DTVW01001198            7843 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2447732, whole
            genome shotgun sequence.
ACCESSION   DTVW01001198 DTVW01000000
VERSION     DTVW01001198.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 7843)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7843)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7843
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2447732"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            297..1463
                     /locus_tag="EYO87_15875"
                     /pseudo
     CDS             297..1463
                     /locus_tag="EYO87_15875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011911248.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family transposase"
     gene            1460..1822
                     /locus_tag="EYO87_15880"
     CDS             1460..1822
                     /locus_tag="EYO87_15880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011910612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid pRiA4b ORF-3 family protein"
                     /protein_id="HIC67444.1"
                     /translation="MTLIARLRIILNDVEPMPMRHIEVPLKIRLDRLHEVIQAAMGWT
                     DTHLYEFRVGDAGWGMPDPDGFYDGPMDAKKMTLEKLLDQTATRTIQYVYDFGDDWDH
                     SIRIERVSCSTGARRFCT"
     gene            complement(1927..2529)
                     /locus_tag="EYO87_15885"
     CDS             complement(1927..2529)
                     /locus_tag="EYO87_15885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011655389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMC-Scp complex subunit ScpB"
                     /protein_id="HIC67445.1"
                     /translation="MTVATRNRKAQGEGSAGFDRELEELPQELRWREWMGRIEAVLFA
                     SASPVGRDDLARVVGQGASVEMLIEDIQAELTGRPYELAQVAGGWMFRTKTQFADAIK
                     AAADHGEQTLAFTEMEMGVLCAIAYHQPIDRAGLADIFGKEVSRDLLARLRYNDLIAS
                     GPRSPRPGAPHTFVTTETFLVTFDLQSLRDLPELELGGPK"
     gene            complement(2526..3470)
                     /locus_tag="EYO87_15890"
     CDS             complement(2526..3470)
                     /locus_tag="EYO87_15890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011655388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1403 family protein"
                     /protein_id="HIC67446.1"
                     /translation="MTYQPTAISDDLSTLPQLPGWVTSGRVETLETVAFRSGAALMVL
                     DQLINDPRHGVPVKLFANRLALSAATATSKLEGRLAREADIRDAYHLTPPGEARGPDG
                     DLLAFWRDAVRLRADETGKIADLAGAEYAGVRLDGGLERARMHGPLDGGVAVLRDVLD
                     ADDRAERVACLLSDAVLARALNWKTVLPVTAQRLTKAVLRDLAADGQGAELAVQVRIL
                     ESIEEIVRMARELTRRAGALGAVAPKLRAKGSEAAVELFLTEDSVAPSSMLSPRIRGT
                     SIPMTDRAARRFCDRLVELGVARELTGRSTFRLYGIAP"
     gene            complement(3683..4699)
                     /locus_tag="EYO87_15895"
     CDS             complement(3683..4699)
                     /locus_tag="EYO87_15895"
                     /inference="COORDINATES: protein motif:HMM:PF06527.9"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67447.1"
                     /translation="MIGQGCMPVVFPPEVDERLSSWIARMAPFYAMTVPEFLAELGLS
                     GRDVFDLEWRLSEGEGARIEARTGLSPQVIQGMTFGELIPEARMLIRRNRYHCPMCPA
                     DVQSKSAALAWAFRCPVHGSDIQDTTGETLPVVLGAKRMATADAPAKVGAAVLDAWVQ
                     GHGLGNLGPAEILALLTTRHRRASPPSLSEQPRMSLETRRDYHEFLTTPIIRQALTVV
                     VPEYDEVAPVLTKPVRPGLFGLAQGSLLQAFALTVGIGRVVENPVDQAISILLKSDVD
                     GQARVRDALATWPLSLRRRISARLWRAQRDERERQSAAKSKKRRQSHECRLIQSHEHC
                     SRIS"
     gene            complement(4696..5160)
                     /locus_tag="EYO87_15900"
                     /pseudo
     CDS             complement(4696..5160)
                     /locus_tag="EYO87_15900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011910856.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(5160..6482)
                     /locus_tag="EYO87_15905"
                     /pseudo
     CDS             complement(5160..6482)
                     /locus_tag="EYO87_15905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011910855.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid replication initiator-like protein"
     gene            6636..7751
                     /locus_tag="EYO87_15910"
     CDS             6636..7751
                     /locus_tag="EYO87_15910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005859468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrase"
                     /protein_id="HIC67448.1"
                     /translation="MPSETEKSTPTPSGEPDDDRVDASDQEENDDIALPSHVAGSGTL
                     DRLVDTARDYARAAASENTLRAYAKDWAHFARWCRMKGAEPLPPSPEMIGLYLADLAS
                     GSGSSPSQSASRPLSVSTIDRRLSGLTWNYAQRGFILDRRNRHIATVLAGIKRKHARP
                     PVQKEAILAEDILAMVATLPYDLRGLRDRAILLLGYAGGLRRSEIVSLDVHKDDTPDS
                     GGWIEILEKGALLTLNAKTGWREVEIGRGSKDQTCPVRALEQWLHFAKIDFGPVFVGT
                     SRDGTRASETRLNNKHVARLIKRTVLDAGIRSELPEKDRLALFSGHSLRAGLASSAEV
                     DERYVQKQLGHASAEMTRRYQRRRDRFRVNLTKAAGL"
BASE COUNT         1521 a         2532 c         2334 g         1456 t
ORIGIN      
        1 caggaaagaa ggcttaagtg caatgacttg gtttatcgct gaactaaaaa aacatgtacc
       61 gatctggaaa tgggcactac tcactactgg tgaacgggtc cccagcgaat gtgtccattc
      121 agagtagtaa cagaagaaat taatcggcga ataaaacgct tttaattaca attataaata
      181 cgatttctat tgaaatttaa tttttgtaca aatacattgc tatgcccatt ttaagtgaat
      241 cttataaggg gtaccacata tctttcttta aataataccg cataccaaat atctaccagt
      301 ggaaggtgat ccagacggtc cgcgagaagt tcacctgccg ggcatgcgag aagatcagcc
      361 agccgccagc gccgttccat cccacgcccc gtggctgggc tgggcccaac ctgctggcga
      421 tgatcctgtt cgagaagttc ggccagcatc agccgctgaa caggcaagtc gagcgctacg
      481 ccaaggaagg tgtcgaggtc agcctgtcca ccctggctga ccaggtcggc gcctgcaccg
      541 ttgcgctgga gccgattcat gcgctgatca gggcccatgt cctggccgcc gagcggctgc
      601 acggcgacga caccacggtg ccgctcttgg cccggggcgg cacgaagacc gcgcggctct
      661 ggacctatgt ccgcgacgac cggcccttcg cgggcggtgc gccgccggcc gcgctgttct
      721 acttctcgcg cgatcgggag atggctcacc cgaaccggca tctcgccggg tggcggggca
      781 tccttcaagc cgatgcctat ggcggttaca acgacctcta tcgcggcgat cgtgatcccg
      841 gtccggccgg aagcgcgctc tgctggagcc atgcccggcg gaagttcttc gagcttgccg
      901 acatcaaggg caatgtccgc aagggcaagt ccgcccacga tatatctcct gtcgcactgg
      961 aggcggtggc aaggatcgat gcgatcttcg acatcgaacg ccagatcaac ggccatgatg
     1021 ccacgttccg gctcgaggcc aggcaccggt tgtcctgtcc cttggttgag gcattgcacg
     1081 cttggctgcg cgccgagcag ggcacgatgt cgaagcacaa tcctgtcgcc aaggcgatca
     1141 attacatgtt caagaaagac cgatgggagg ccttcacgcg cttcctcgag gatgggcggg
     1201 tctgcttgac gaacaacgcg gccgagagag cactccgcgg tgtggccctt ggccggaagt
     1261 catggctctt cgccggctcc gagcgcggcg gtgaccgcgc cgccttcatg tattcgctga
     1321 tcgtcactgc gaagatgaac gatgtcgacc ctcaggcctg gctcggcgac gtcctcgccc
     1381 ggctgcctgg cacgacagcc tcccgggtgc cggatctcct gccttggaat tggtccccga
     1441 cacggcaaag gatcgccgca tgaccctgat cgcccgcctc cggatcatct tgaacgacgt
     1501 cgagccaatg ccgatgcgcc acatcgaggt gccgctgaag atcaggctcg accggctgca
     1561 tgaggtcatc caagcggcca tgggctggac cgacacccat ctctacgagt tccgggtggg
     1621 ggatgccggt tggggcatgc ccgacccgga cgggttctac gacggcccca tggacgcgaa
     1681 gaaaatgact ttggaaaagc tgctcgacca gaccgccacc aggacgatcc agtatgtcta
     1741 cgacttcggt gatgactggg accacagcat ccggatcgag cgggtgtcct gttcgacggg
     1801 agcgcgtcgc ttttgcacgt agctcggacc attctgtgtc agagagagca ttcaggtaag
     1861 tctctgtgtg aaccggatgc gttgatggcg gaacaatgat tgcttcgatc gtgagtgcgc
     1921 tcgccttcac tttgggccac ccagttctaa ctctggcaag tcccgcaggc tctgcagatc
     1981 gaacgtcacc agaaacgtct ccgtcgtcac gaacgtatgc ggtgcgcccg gccgcggcga
     2041 ccgcggcccg ctggcgatca ggtcattgta gcgcagccgg gccagaagat cgcggctgac
     2101 ctccttgccg aagatgtccg ccagaccggc ccggtcgatc ggctggtgat aggcgattgc
     2161 acaaagcacc cccatctcca tctcggtgaa ggccaaggtc tgctcgccat gatcggcggc
     2221 ggccttgatc gcgtccgcga actgcgtctt ggtccggaac atccatccac ccgctacctg
     2281 ggccagctca tacgggcggc cggtcagttc ggcttggatg tcctcgatca gcatctcgac
     2341 cgacgccccc tgccccacca cgcgggccag gtcgtcgcga ccgaccggcg aggcactggc
     2401 gaacaatacc gcctcgatcc gccccatcca ttcgcgccag cgcagctcct gcggaagttc
     2461 ttcaagttcc cggtcgaacc cggcgctgcc ctccccttgc gccttgcggt tccgtgtcgc
     2521 gaccgtcatg gcgcgatccc atacagccgg aacgtcgacc gcccggtcag ctcgcgcgcg
     2581 actcccaact cgaccagccg gtcgcagaac cgccgggcag cgcggtccgt catcgggatc
     2641 gaggtaccgc gaatccgcgg tgacaacatc gacgacggcg ccacggagtc ctcggtcagg
     2701 aacagctcga ccgctgcctc cgatcctttc gcccgcagct tcggcgccac ggcgccaagc
     2761 gcgcctgctc gacgagtaag ctctcgcgcc attcggacga tctcttcgat gctctccaga
     2821 atccggacct gcactgccag ctcggccccc tgcccgtctg cggccagatc gcgcagaacc
     2881 gcctttgtca aacgctgcgc agtcacgggc agcacggtct tccagttcag agcccgtgcc
     2941 aggacggcat cagaaagcag gcaggcgacc cgctccgctc ggtcgtcggc gtcgagcacg
     3001 tcgcgtagga ccgccacgcc gccatccaac ggcccatgca tccgggcgcg ctccaatccc
     3061 ccatcaagcc ggacgcccgc gtactccgcg ccagccagat cagcgatctt gccagtttcg
     3121 tccgcccgca ggcgcacggc atctctccaa aacgccagca gatcaccatc tggcccccgc
     3181 gcttcgcctg gcggcgtcag atgataggcg tcgcggatat ccgcctcccg cgcgaggcgg
     3241 ccttccagtt tcgaggtcgc tgtcgccgcg ctcagcgcca gccggttggc gaacagtttc
     3301 acgggcacgc catgcctggg atcgttgatc agctggtcga gcaccatcag cgccgcgccc
     3361 gaccgaaagg ccacagtttc aagggtttcc acacgcccgg aggtgaccca gcccggcagc
     3421 tgcggtagtg tactcaggtc gtccgatatg gctgtcggct ggtatgtcat accacaagac
     3481 tatcccatgg cggcgctttt gtccacaatg tgatgtgaaa accgccccac attgccgttc
     3541 ggctttatgt ccaataagtt tgccttatcg gacacaacta gatatgctcg aaaacagttc
     3601 atgtcgcttt agtttcatgg gtggatgtcg gatgaccgga gttcatgaga ttcaagcact
     3661 tccctgaaaa acgaaccggg gttcatgaga ttctggagca gtgttcatga gactggatga
     3721 gtcggcattc gtgagactgg cggcgtttct tggactttgc agcgctctga cgctctctct
     3781 cgtcgcgctg agcacgccag agccgggctg agatgcgtct cctcaacgag agaggccatg
     3841 tcgcaagcgc gtcgcgaacc cgcgcctgac cgtccacgtc actcttcagc aagatggaga
     3901 tcgcctgatc gaccgggttt tcgacgaccc gaccgatccc caccgtcaat gcgaatgctt
     3961 gtaacaacga gccctgcgcg aggccaaaca agccggggcg cactggtttg gtcaggaccg
     4021 gcgcgacctc gtcatactcg ggaacgacaa ccgtcagcgc ttggcggatg atcggcgtgg
     4081 taagaaactc gtggtagtcg cggcgcgtct cgagcgacat gcgcggctgc tcggaaagag
     4141 acgggggcga ggctcggcgg tgtcgtgttg tcagaagggc caatatctcg gcaggcccaa
     4201 gattcccaag accgtgtccc tgaacccacg catcgagaac agcagccccg acctttgcag
     4261 gcgcgtccgc tgtcgccatc cgttttgcac ccagcacaac aggcagcgtc tcgcctgttg
     4321 tatcctgaat atctgaacca tggacaggac accgaaaagc ccacgcaaga gccgcggact
     4381 tgctctgcac gtcggcggga cacattgggc agtgataccg gttcctgcgg atcaacatcc
     4441 gggcctccgg tatcagttca ccgaacgtca tcccctgtat gacctggggc gaaagcccgg
     4501 ttcgggcctc aatccgagcc ccctcccctt ccgacagtcg ccattccaga tcgaacacat
     4561 cgcggccgga cagcccaagc tcggccagaa actccggtac tgtcatcgcg tagaatggcg
     4621 ccatgcgggc gatccaggag gacaggcgtt cgtcaacctc gggtgggaac accacaggca
     4681 tgcagccctg cccgatcaca ctggctctcc cagggcggct tgcaaccggt cgccgcccag
     4741 aatgtcacgc gagaggatgc gttcctctcc gctttcgatg gcggcgattg ccagctgaga
     4801 catgatggaa aatatccccg aggtgattcc gctggtcacc ttgatcaccc gtgagagcgc
     4861 cttctcatcg atctcgcttt cgcgtcggag cggcaggctg cggatcagcg tgctcatcag
     4921 cccggtgaaa tcggccccgt cctgccaggg cggcagggcg aaagcctcga accggcgcac
     4981 cagctggtca tcggtgcgca gcgcattgcg ggcctgggcg gtgccgacgc aaacgagagg
     5041 aacgcgcagc tcgttgccca gaaaccgcag catgttcagg aaccgtgcct gttcgcgtat
     5101 cgtgcccgcc tgcaggctgt ggatttcatc gatcaccagc atgtggggcc gcagttcggt
     5161 ggtcgcgcct cgatgatccc gttctcggtc agcacgaaga tgcgcgagag atcgcgcggg
     5221 tcgtatttca gtgtgtattt gcgggtttcc tggcccatca gccagcgcaa ctcgtccgac
     5281 caatagcgaa tatggaagag atgaaagcca tcgcgctgta agaccctctg ctccgagggc
     5341 aggaagtcga ccaggaactg gcgcagatcg gcgggcatgc ggagcttggg ttcgccggca
     5401 cacagccccc aggccgctga gggcgtagtt tccaaggcgc tgtggatgcg cgcgtggtag
     5461 gagccggtga tttcgagggc gagccaggtt tccagctccg caagcgtcat caccgcctcg
     5521 gcttccgcgt cgagagcgcc acgttcgaag atgttcgaga aatgcgatcc cggcagcagg
     5581 tggaccaccc ccatcattgt gccgatcagc cgctcgatat ggccgccata gcgcggtgtg
     5641 ccgggcgggc ggtaccgcag gtcgatctgg tactcggcgc aggcacgctc gaaggcgcgg
     5701 gcatggaatt ccgcgccgtt gtccacatag atcgccctgg ggataccatg ggcgggccag
     5761 tccgtattga tcccacgcgc cgccagccaa tgcgatttct ccatcaccgc atgggtcaga
     5821 cagagcgcga ctgaaagaag cgagggcggt tccagagaca ggtgaaaccc caaaatcatg
     5881 cggctgttta cgtcaatcgc caccgtcagc gtcggccggc caagcgggcg ccgtgagacc
     5941 ggatcgacga ccgtcacatc agccttggtg tgatcgatct ggacgatgtc gagcaggtgg
     6001 gccgcggtga gcgttccggg tgtggcaagg tggcggcgct cagccttgtc cttcccctcc
     6061 cgcctggcca tgagttttgc ctgatccttc agatccagcc agcgaccaag ccgccggatc
     6121 gagggtggtg tcagcccttt cgcctgacaa tcggctgcga cctcccgcca gaaccgggtc
     6181 ttggtcggtt tgcggcgggt ggcgtagaat tccctgaaat ggtgggccac gatcgcctcg
     6241 accgcagggt ccattggctg catgcctggc tttgggcctg acgaattcgg caacagcgca
     6301 ctggtccgcg cgtcgtcccg gaactgtttc gccaagcgga agaccgtcgc ccggctgaca
     6361 tccaactgcc gcatcgccca agaaacgtca ccttcggtga gctgttccgg cagctccgca
     6421 agaactcttg cgcgaaactc ggcttcttcc cagtcttggt caggcgcggg attatcggac
     6481 atgacttgaa cgacgcacgg atgctgtgta gtctcacgaa tagtgactca catccatgta
     6541 cagtctcatg aattccgact caatctcgaa atgaaaaacc ggcaaagcct tgaaaacaaa
     6601 tggaccgcag tctcaagaat tccggcagag cgacaatgcc ctcagagacc gagaaatcga
     6661 cgccaacgcc ctctggtgag cctgatgacg atcgcgtcga cgctagcgat caagaggaaa
     6721 acgatgacat cgccctgccc tcccatgtcg cgggttccgg cacgctcgat cgactggtgg
     6781 acaccgcccg agattacgcc cgcgccgcgg cttcagagaa cacgctgagg gcctatgcga
     6841 aagactgggc gcatttcgcg cgatggtgcc gaatgaaggg cgcggagcca ttgcccccct
     6901 ctcctgagat gatcgggctt tacctcgccg atctggcctc cgggtcaggc tcctcccctt
     6961 cgcagtcggc gtcccgaccc ctgtcggtca gcacgatcga ccgccgcctg tccggtctca
     7021 cctggaacta cgcgcagcgc gggttcattc tcgatcgcag gaaccggcac atcgcgacag
     7081 ttctggcggg catcaagcgc aagcacgcgc ggccgccagt ccagaaggaa gcgatcctgg
     7141 ccgaggacat cctcgcgatg gtggccaccc tgccctatga cctgcgcggg ctacgcgatc
     7201 gggcaatcct tctgcttgga tacgccggag gcctccgccg atccgaaatt gtcagcctgg
     7261 acgtgcacaa agacgataca ccggattccg gcggctggat cgaaatcctg gagaaaggcg
     7321 ccctcctgac cctcaacgcc aaaaccggtt ggcgcgaagt cgagatcggc cgcggctcca
     7381 aggatcagac ctgccctgtt cgtgcccttg agcaatggct gcacttcgcg aagatcgact
     7441 tcggcccggt cttcgtcgga acctcgcgtg atggcacacg ggcatccgaa acgcggctca
     7501 acaacaaaca tgtggctcga ctgatcaagc gcacggtcct cgacgccggc atccgatcag
     7561 agctgcccga aaaggatcgc ctcgccctct tctctggcca ctctctgcgc gccggtctcg
     7621 ccagttcggc cgaggtcgac gagcgctatg tccagaagca gctcggacac gcctcggccg
     7681 agatgacccg ccgctatcag cgccgccgcg accggttccg ggtgaacctg accaaggcag
     7741 ccggtctctg atcgcgcggt cattcggtcg tttattagtg ttatctaaaa ttgcaaatgg
     7801 cccgttttca tgcccctgat aggctatgcg cgcgtatcca cag
//
LOCUS       DTVW01001199            2226 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2448265, whole
            genome shotgun sequence.
ACCESSION   DTVW01001199 DTVW01000000
VERSION     DTVW01001199.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2226)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2226)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2226
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2448265"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1307
                     /locus_tag="EYO87_15915"
     CDS             <1..1307
                     /locus_tag="EYO87_15915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013654884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HIC67449.1"
                     /translation="DAAEAESYTHQVLDHQALLRPVVKASFRLHQGAVGAVIAKAIAI
                     ATSGQPGPVHVDVPIGVAENPGDEARAATIPPARPGLPDASSLARAQAALAGAMRPLM
                     IAGVDAVNEGAGPTIADFCRAHGVPLITSYKGKGLMDEADPLSLGGAGLSPRADRVLM
                     PLIAQADVIVMAGYDPIEMRAGWRDPWRPDQTAIEITPVARGHGMHRIDELLIGAIAP
                     TLAALRHDVATPRWPDGAPGQARRALERAFDPPPGWGPHRAFQRLRQLLPPETVVTAD
                     SGAHRILASQIWTCPAPRLMLQSSALCTMACALPLAAGAKLGRPDTPVLAILGDGGLE
                     MGAGDLASLRDLGLPVILCVLVDGSLSLIEMKQRASQRGNLGVDFAGRTDFPALARAF
                     GGHGAWIEDEDTLEVQTRAALDRDHFSLLALRIGPRAYDGAF"
     gene            complement(1289..>2226)
                     /locus_tag="EYO87_15920"
     CDS             complement(1289..>2226)
                     /locus_tag="EYO87_15920"
                     /inference="COORDINATES: protein motif:HMM:PF04143.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="YeeE/YedE family protein"
                     /protein_id="HIC67450.1"
                     /translation="LLALILPVSLTLIALGGASGWVVPVGVGFLAGAAIFGIGMALAG
                     SCASGTLFVAGGGNTRMLVTLAFFIAGSLLGTAHVPFWLSLPRLPSLSLPATFGTPGA
                     IAISLGLCAALAWLSRLPERGRPIPASRSVPPFRLLRGPWPAWFGALVLAIAALGMFL
                     SLHRPWGVTEAFALWGAKIYQALGFSVADWPYWSGGRRAQLTQPVLAHATSVTNLALI
                     AGAMAAASLAGRFRPVWTVSGREVATAALGGLAMGYGARLSSGCNIGALMGGVTSGSL
                     HGWVWAVAAFAGYALMLRWRLPGRRGDARVQNAPS"
BASE COUNT          355 a          812 c          793 g          266 t
ORIGIN      
        1 tcgatgccgc cgaggccgaa agctataccc atcaggtcct cgatcatcag gcgctgctgc
       61 gtccggtggt caaggccagc tttcgcctgc atcagggtgc ggtgggcgcg gtgatcgcca
      121 aggccatcgc catcgcgacc agcggccagc ccggcccggt tcatgtcgat gtgcccatcg
      181 gcgtggccga gaaccccggc gacgaggccc gagccgcaac gattccgccc gcccgccccg
      241 gcctgccgga tgcatcctcg ctggcgcggg cgcaggctgc gctggcgggg gcgatgcggc
      301 cgctgatgat cgccggggtc gatgcggtga acgaaggcgc gggcccgacc attgccgatt
      361 tctgccgcgc ccacggcgtg ccgctgatca ccagctacaa gggcaagggc ctgatggacg
      421 aggccgatcc gctgtcgctg ggcggggccg ggctgtcgcc gcgcgccgac cgggtgctga
      481 tgccgctgat cgcacaggcc gatgtgatcg tgatggccgg ctatgacccg atcgagatgc
      541 gggccggctg gcgcgacccc tggcggcccg accagaccgc gatcgagatc accccggtcg
      601 cgcgcggcca cgggatgcac cgcatcgacg aattgctgat cggtgccatc gcaccgacgc
      661 tggccgcgct gcgccacgac gtggccacgc cacgctggcc tgacggggcg ccgggacagg
      721 cgcgcagggc gctggagcgc gccttcgatc cgccgccggg ctgggggccg catcgggcgt
      781 tccaaaggct gcggcagctg ctgccacccg aaacggtggt gacggcggat tcgggcgcgc
      841 accggattct cgccagccag atctggacct gtccggcgcc gcggctgatg ctgcaatcca
      901 gcgcgctttg caccatggcc tgcgcgctgc cgctggcggc gggggcgaaa ctgggccggc
      961 cggatacgcc ggttctggcg atcctgggcg atggcgggct ggagatgggc gccggcgacc
     1021 tggccagcct gcgcgatctg ggcctgccgg tgatcctgtg cgtgctggtc gatggcagcc
     1081 tgtcgctgat cgagatgaaa cagcgcgcca gccagcgcgg caatctgggc gtcgatttcg
     1141 cgggccggac cgattttccg gcgctggccc gtgcctttgg cggccatggc gcctggatcg
     1201 aggacgaaga cacgctggag gtccagaccc gcgccgcgct ggaccgcgac catttcagcc
     1261 tgctggcgct gcggatcggg ccgcgcgcct atgacggcgc gttctgaacc cgcgcatcgc
     1321 cccgcctgcc cggcagccgc catcgcagca tcagcgcata gcccgcaaag gccgccaccg
     1381 cccaaaccca gccatgcagg ctgcccgagg tgacgccgcc catcagcgcg ccgatattgc
     1441 agcccgagga caaccgcgca ccatagccca tcgccagccc gcccagtgcc gcggtggcga
     1501 cctcccgccc cgagacggtc cagaccggac ggaaccgccc cgccagcgag gccgccgcca
     1561 tcgcccccgc gatcaatgcg agattggtga ccgatgtggc atgggccagc accggctgcg
     1621 tcagctgcgc gcgccgcccg cccgaccaat agggccagtc cgcgaccgaa aaccccaggg
     1681 cctgatagat cttggccccc cacagcgcga aagcctcggt cacgccccag ggccggtgca
     1741 ggctcagaaa catgcccagg gccgcgatgg ccaggaccag cgccccgaac caggccggcc
     1801 aggggcctcg cagcaggcgg aacggcggca cggaccgtga cgccgggatg gggcggccgc
     1861 gctcgggcag gcggctgagc caggccagcg cggcgcaaag gcccaggctg atggcaatgg
     1921 cgccgggggt gccgaaggtt gccggcagcg acaatgacgg caggcgcggc agcgacagcc
     1981 agaacggcac atgggcggtg cccagcagcg atccggcgat gaagaaggcc agagtcacga
     2041 gcatccgcgt attgccgccc cccgccacaa acagggtccc cgaggcgcag ctgcccgcca
     2101 gcgccatgcc gatgccgaag atcgcggccc ccgccaggaa cccgaccccg accggcacga
     2161 cccagcccga ggcgccgccg agggcaatca gcgtcaggct gaccggcagg atcagcgcca
     2221 gaagca
//
LOCUS       DTVW01001200            1785 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2448349, whole
            genome shotgun sequence.
ACCESSION   DTVW01001200 DTVW01000000
VERSION     DTVW01001200.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1785)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1785)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1785
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2448349"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..238
                     /locus_tag="EYO87_15925"
     CDS             <1..238
                     /locus_tag="EYO87_15925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018301413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="translational GTPase TypA"
                     /protein_id="HIC67451.1"
                     /translation="SRDNDLEVNPLKGKKLTNVRASGTDEAVRLTPPVRLSLEAAIAY
                     VNDDELVEVTPKTIRLRKRHLDPHERKRQARAEA"
     gene            454..1125
                     /locus_tag="EYO87_15930"
     CDS             454..1125
                     /locus_tag="EYO87_15930"
                     /inference="COORDINATES: protein motif:HMM:PF13305.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HIC67452.1"
                     /translation="MSKHQIIADGTSLHGRSIRAALDLLEESQSRRPTMAEIAELVGV
                     PAKDLHRIFPDDRSVLVAAAEQALVWLIDSSVKAVVQVDPDDSVAQFIALGETYIDWA
                     SANPSQFRLLQDERVLNAKATPQLSRYIDSMVDLMIRTLERARDAGRLKPDENIPLMA
                     LSSHAFVIGLGRMIVEGRLHDTLPDVPCFSAARIAKLALRDFVHRAARGSVPAGGSGN
                     QNIPA"
     gene            1408..1704
                     /locus_tag="EYO87_15935"
                     /pseudo
     CDS             1408..1704
                     /locus_tag="EYO87_15935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_351558.1"
                     /note="catalyzes the formation of L-homocysteine from
                     S-adenosyl-L-homocysteine; incomplete; partial in the
                     middle of a contig; missing C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylhomocysteinase"
     gene            complement(1671..1785)
                     /locus_tag="EYO87_15940"
                     /pseudo
     CDS             complement(1671..1785)
                     /locus_tag="EYO87_15940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012759568.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT          317 a          579 c          564 g          325 t
ORIGIN      
        1 cagccgcgac aacgacctgg aagtgaaccc gttgaagggc aagaagctga ccaatgtccg
       61 cgcctcgggc accgacgagg ccgtgcgcct gacaccgccc gtgcgcctgt cgctggaagc
      121 ggccattgcc tatgtcaatg atgacgaact ggtcgaggtc acgcccaaga cgatccggct
      181 gcgcaaacgc catctggatc cgcatgaacg caaacgccag gcccgtgcgg aggcctgacc
      241 atcgcggtga aatttcgcca tggaatcagg ctttccccta ggtaaaactg tctatttaga
      301 aggtttgcgg aaccgccttt ccgtgttagc ctgcccatac cggaattgtg tgttttccct
      361 gcaacacggc tttcggttcg gggcgattgc gctgcggtct tccgtgcggg ccgcgacctg
      421 cgccctgaat cacgcgaacg cgccgaggcg gacatgagca agcatcagat catcgccgac
      481 gggaccagtc ttcacggtcg ctcgatcagg gcggcccttg atctgctgga ggaaagccag
      541 tcgcgacgtc cgaccatggc cgagatcgcc gaactggtcg gcgtgccggc aaaggacctg
      601 catcgcatct ttcccgacga ccgttccgtg ctggtggccg ccgccgaaca ggcgctggta
      661 tggctgatcg attcgtcggt gaaggcggtc gttcaggtcg acccggacga ttccgtcgcc
      721 cagttcatcg cgcttggcga gacctatatc gactgggcca gcgccaaccc ttcgcaattc
      781 cgcctgctgc aggatgaacg tgttctcaat gccaaggcga cgccgcagct cagccgctat
      841 atcgattcga tggtggatct gatgatcagg accctcgaac gtgcgcgcga tgccggccgc
      901 ctgaaaccgg acgagaacat tccgctgatg gccctgtcct cgcacgcctt cgtcataggg
      961 cttggcagga tgatcgtcga ggggcggctg cacgacacgc tgccggacgt gccctgtttc
     1021 tcggcggccc ggatcgccaa actggcgctg cgtgactttg ttcatcgtgc cgcgcgcggc
     1081 agcgtacccg ccggcggctc cgggaatcag aacattcccg cgtgatcacg gtgacgtccg
     1141 ccgggtcacg gcaatccgat tgcgcttgga tctttcttca cgcttttcgg gcataataaa
     1201 ggcttgaacc cgacgggaag cgagcagcgc actgccgctt tccgggctgc ggcggatctg
     1261 gggttccgtc gcagcctttt ttgccgcagg ccggcccgcg cgaaggccca ggggatcggt
     1321 cctccacaga agggcgcggc ctctttcccc tgcaggctac ttgcgctatg ccctcggcaa
     1381 cccgcgatct gtgaaagcaa gaaccccgtg accgatcata tcatcaagga tatcgcgctg
     1441 gccgatttcg gccgcaagga actggacatc gcagaaaccg agatgcccgg cctgatggcg
     1501 ctgcgcgccg aatatggcga ggccaggcca ttggccgggg cgcggatcgc cggcagcctg
     1561 cacatgaccg tgcagaccgc cgtgctgatc gagacgctgg tggcgcttgg cgccgacgtg
     1621 cgctgggcat cgtgcaacat cttctcgacc caggaccacg ctgccgcggc catcgccgct
     1681 tcgggcacgc cggtggcggc gatggcggca gcggcgtgat cctgggtcga gaagatgttg
     1741 cacgatgccc agcggacctc ggccccaagc gccaccagcg tctcg
//
LOCUS       DTVW01001201            3334 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2448776, whole
            genome shotgun sequence.
ACCESSION   DTVW01001201 DTVW01000000
VERSION     DTVW01001201.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3334)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3334)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3334
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2448776"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..276)
                     /locus_tag="EYO87_15945"
     CDS             complement(<1..276)
                     /locus_tag="EYO87_15945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsQ"
                     /protein_id="HIC67453.1"
                     /translation="MSAVIDHRPQQRQLQPPPQPRQRRDPAPSRLQYRLERVWLKPLY
                     RRVIRVGVPAFLIAMTAGLWLSDQDRRAALGAGVAGLVDKVQSREEFQ"
     gene            complement(264..1199)
                     /locus_tag="EYO87_15950"
     CDS             complement(264..1199)
                     /locus_tag="EYO87_15950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011907750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HIC67454.1"
                     /translation="MAGKSSRTAHTVAVLMGGPSAEREVSLSSGRECAAALRVAGYDV
                     TEVELGPEPGAEIATRLNGLRPDVVFNALHGRWGEDGCAQGVLEWLDLPYTHSGVLAS
                     ALAMDKTRAKDAFRAAGLPVLESVIAERADVSARHVMPAPYVVKPNDEGSSVGVYIIA
                     SENNGPPALDDRMPARVMVETYAPGRELTTTVMGERALAVTEIFAEGWYDYDAKYRPG
                     GSRHEIPADLPADITEACLDYALRAHRALGCRGLSRSDFRWDDSRGRDGLYLLEVNTQ
                     PGMTPTSLAPEQAAHAGIDFPALMRWMVEDALCRP"
     gene            complement(1359..2291)
                     /gene="murB"
                     /locus_tag="EYO87_15955"
     CDS             complement(1359..2291)
                     /gene="murB"
                     /locus_tag="EYO87_15955"
                     /EC_number="1.3.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011750716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate dehydrogenase"
                     /protein_id="HIC67455.1"
                     /translation="MSLDLPTPRGALTPNRPLDGLTWLRVGGPAEWLFQPADPQDLAE
                     FLVVLDPGIGVFPIGVGSNLIVRDGGIRGVVIRLGRAFNAIDIDGDIVTAGAAALDAH
                     VARRAAESGLDLTFLRTIPGSIGGAVRMNAGCYGSYVADHLIDARAVTREGRQVTLTP
                     ADLGFAYRHADLPDGWILTDARFRADRADPDALHQKMADQIARRDLAQPTRDRSAGST
                     FRNPAGFSSTGRADDSHELKAWTLIDRAGLRGHSWGGAQMSEKHPNFLLNTGGATAAE
                     LETLGELVRRRVREDSGHDLQWEVMRVGEPLPET"
     gene            complement(2481..>3334)
                     /locus_tag="EYO87_15960"
     CDS             complement(2481..>3334)
                     /locus_tag="EYO87_15960"
                     /inference="COORDINATES: protein motif:HMM:PF07731.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="copper oxidase"
                     /protein_id="HIC67456.1"
                     /translation="TMTMPMSGMDQDDMPMDLNDISFDAFLVNDRDLSDPEVIRVDRG
                     APVRLRVINAASSTNFWIDLGAVRGRLVAVDGMPVRPIIGRRFELTMAQRVDIEIDIP
                     DAALALPILAQREGDTARTGLILATQGARIDRISSQADRTAPPVLLDLERKLLAETPL
                     QKRTVDRTLSCDLTGSMEPYVWGINGKTFENRAPLEVKQGERVEIVIRNRTMMSHPMH
                     LHGHHFQVVGIGPARLSGAMRDTVLVPAMESVTIAFDADNPGNWPFHCHNLYHMQAGM
                     MTALRYL"
BASE COUNT          566 a         1140 c         1069 g          559 t
ORIGIN      
        1 ctgaaattcc tcgcggctct gcaccttgtc caccagcccg gcgacgccgg cgccaagcgc
       61 ggcgcggcga tcctggtccg acagccacag gcccgccgtc atcgcgatca ggaatgccgg
      121 cacacccacc cggatcaccc ggcgataaag cggcttcagc cacacccgct ccagccggta
      181 ttgcaaccgc gacggcgcgg gatcgcgcct ttgccggggc tgcggcggcg gctgcaattg
      241 ccgctgctgc ggacgatgat cgatcacggc cgacacagcg catcctccac catccaccgc
      301 atcagggcgg gaaaatcgat gccggcatgg gccgcctgtt ccggcgccag cgaggtcggc
      361 gtcatgccgg gctgggtatt gacctccaac agatacagcc cgtcgcggcc gcggctgtca
      421 tcccagcgga aatccgaccg gctgaggccg cgacagccaa gcgcgcgatg cgcccgcaag
      481 gcgtaatcga ggcaggcttc ggtgatgtcg gcgggcagat cggccggaat ttcgtggcgc
      541 gagccgccgg ggcggtattt cgcatcgtaa tcataccagc cctcggcgaa gatctcggtc
      601 acggccagcg cgcgctcgcc catcaccgtg gtcgtcaatt cgcggcccgg tgcataagtt
      661 tcgaccatca cccgtgccgg catcctgtcg tccagcgcgg gtgggccatt gttttccgac
      721 gcgataatat agacaccgac gctggaaccc tcgtcattcg gcttgacgac atagggggca
      781 ggcatgacgt ggcgggcgct gacatcggcg cgttcggcga tcacgctttc cagaaccggc
      841 aggccggcgg cgcggaacgc atccttggcc cgcgtcttgt ccatcgccag ggccgaagcc
      901 agcacgccgg aatgggtata gggcaggtcc agccattcca gaacgccttg tgcgcagcca
      961 tcctcgcccc agcggccatg caaggcattg aagacgacat cgggccgcag gccattcagc
     1021 cgcgtggcga tctccgcccc cggttccggc ccgagctcga cctcggttac atcatagccc
     1081 gccacccgca acgccgccgc gcattcgcga cccgatgaca gcgacacctc gcgctcggcc
     1141 gagggtccgc ccatcagaac ggctacggtg tgggctgtcc tgctcgactt gcccgccacg
     1201 cttctgcctc ttgagcccgg ttgatccggg cctgtcttga tcggcgcggt cggattcttc
     1261 ccgatcttgc gccatgtccg gacaggatag ccgcaaagca cccgccgcaa aagacaaatt
     1321 tcgcgtttct cgtcagaatg ttcgcttggg ctatggtgtc aggtttccgg cagcggctcg
     1381 cccacgcgca tgacttccca ttgcagatcg tggccgctgt cctcgcgaac gcggcggcgc
     1441 accagttcgc ccagggtttc aagctctgcc gccgtggcgc cgccggtgtt cagcaggaaa
     1501 ttgggatgtt tctcggacat ttgcgccccg ccccagctat gcccgcgcag gcccgcccga
     1561 tcgatcagcg tccacgcctt caattcgtgg ctgtcatcgg cgcggccggt cgagctgaaa
     1621 ccggccggat tgcgaaacgt cgatccggcg ctgcggtcgc gggtcggctg ggccagatcg
     1681 cgcctggcga tctggtcggc catcttctga tgcagcgcgt cgggatcggc ccggtcggcg
     1741 cgaaagcgcg catccgtcag gatccagcca tcgggcagat ctgcatgacg ataggcaaag
     1801 cccagatccg cgggcgtcag cgtgacctgg cggccctcgc gggtgacggc acgggcatcg
     1861 atcaggtgat cggcgacata gctgccatag caaccggcat tcatgcgaac cgcacccccg
     1921 atactgccgg gaatggtgcg caggaaggtc agatccagcc cggattccgc cgcccggcgg
     1981 gcgacatggg catccagcgc ggcggcgccc gcggtcacga tgtcgccgtc gatgtcgatg
     2041 gcattgaacg cccggccgag acggatcacc accccgcgaa tgccgccgtc gcggacgatc
     2101 agattgctgc cgacgccgat cggaaagacc ccgatgcccg gatccaggac aaccaggaat
     2161 tccgccagat cctggggatc ggcgggctgg aacagccatt cggcggggcc gccgacgcgc
     2221 agccatgtca gcccgtccag aggacggttc ggcgtcagcg cgccgcgcgg agtgggaaga
     2281 tcgaggctca tggcaaggct ggtagccagc gcgcgccatg gcgtcaatat cggcccgcga
     2341 atgcccttgc atccgcgact ccggccgggc ggcggatcga cgcctggttc aggatcgcgt
     2401 tcggatacgg tcctgccgca acgggatccg ggtcgccgcg gcccagggca cgcacctgca
     2461 gcctcgcccg tgccggtccg tcagagatat cgcagggccg tcatcattcc cgcctgcatg
     2521 tgatacaggt tgtggcagtg aaacggccag ttccccggat tgtcggcgtc aaaggcgatc
     2581 gtcacggatt ccatcgccgg aaccagcacc gtgtcacgca tggcacccga cagtctcgcg
     2641 ggtccgatgc ccacgacctg gaagtgatga ccgtgcagat gcatcgggtg cgacatcatc
     2701 gtgcggttgc ggatgacgat ttcgacccgt tcgccctgct tcacctccag cggcgcgcgg
     2761 ttctcgaacg tctttccatt gatgccccag acatagggct ccatgctgcc ggtcagatcg
     2821 caggaaagcg tccggtcgac ggtgcgcttt tgcagaggtg tctcagccag aagcttgcgt
     2881 tccagatcga gaagcaccgg gggcgcggtc cggtccgcct gcgacgagat ccggtctatc
     2941 ctggcgcctt gcgtcgcgag gatcagcccc gtccgcgccg tgtcgccttc gcgttgcgcc
     3001 aggatcggca gagccagcgc cgcgtcggga atatcgattt cgatgtcgac gcgctgcgcc
     3061 atcgtcagtt cgaagcgccg cccgatgatg ggcctgaccg gcatcccgtc cacggcgacc
     3121 agtctgcccc gaaccgcgcc gagatcgatc cagaaattgg tcgatgacgc cgcgttgatg
     3181 acccgcagcc ggaccggtgc gccgcgatcg acgcggatca cctcggggtc tgacagatcc
     3241 cgatcgttga caaggaaagc gtcgaaggag atgtcgttca gatccatcgg catgtcgtcc
     3301 tgatccatgc cggacatcgg catcgtcatc gtca
//
LOCUS       DTVW01001202            2612 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2449326, whole
            genome shotgun sequence.
ACCESSION   DTVW01001202 DTVW01000000
VERSION     DTVW01001202.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2612)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2612)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2612
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2449326"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1098
                     /locus_tag="EYO87_15965"
     CDS             <1..1098
                     /locus_tag="EYO87_15965"
                     /inference="COORDINATES: protein motif:HMM:PF00070.25"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HIC67457.1"
                     /translation="TVIGAGVAGLTAAVALARRGAVVTVLERSDGIREVGAGLQISPN
                     AMRVVEALDLGPALRDVSLRSRAVQLRDASGAPVLRLDLRRHRPMDDFRLIHRAGLIA
                     LLERAARDAGARIALGRNVEVPPQGPLVIGADGLHSQVRRVLNGREVPFFTRNTAWRA
                     VIRDPGGAPEAQVFMGPRRHLVSYPLTGGLRNIVAVQERDAWQAEGWSHPDDPAQLRA
                     AFASFGGPVPGWLGEVESVHIWGLFRHQVARCWQDGRLVLIGDAAHPTLPFMAQGAVM
                     AIEDAWILAACLDENPDQKSALARFETLRKPRASRVVAAANDNARNYHLTGARRVAAH
                     AALRLANRLAPDRMLARFDWLYDYDPTAGSA"
     gene            complement(1171..2514)
                     /locus_tag="EYO87_15970"
     CDS             complement(1171..2514)
                     /locus_tag="EYO87_15970"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_351913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HIC67458.1"
                     /translation="MSRGLFGTDGVRGRANTHPMTAEMALRLGAAAGRYFRRDGRNRH
                     RVVIGKDTRQSGYMLENALTAGLTSTGMNVLLLGPVPTPAVGFLTRSMRADLGIMISA
                     SHNPADDNGIKFFGPDGFKLSDEAEAEIEAIVAGEIEPAQPNNIGRARRVDDGRGRYV
                     EYAKTTFPAGQRLDGLKVVVDCANGAAYRAAPEVLWELGAEVIPLGVDPDGRNINAGV
                     GSTHPEACAAAVLDHGADLGISLDGDADRVAIIDETGRLADGDQIMALLASRWAAQGR
                     LRGGALVATVMSNLGLEHFLSGHALKLERTRVGDRYVVEKMREGGFNLGGEQSGHIVM
                     TDYATTGDGLIAAMQFLAAMSEIGDSASALAAQFDPVPQLLKNVRYAAGADPLSAEAV
                     RAVIAQAEARLAGSGRVLIRKSGTEPLIRVMAEAENEDMLREVVDGIVAAVERAA"
BASE COUNT          377 a          946 c          857 g          432 t
ORIGIN      
        1 accgtcatcg gggcgggcgt cgccgggctg acggcagccg tcgcgctggc gcggcgcggc
       61 gccgtggtga cggtgctgga acgcagcgac gggatccgag aggtcggggc ggggctgcag
      121 atctcgccca atgcgatgcg ggtggtcgag gcgctggatc tgggtccggc gctgcgcgac
      181 gtctcgttgc gcagccgggc cgtgcagttg cgcgatgcgt cgggcgcgcc ggtccttcgc
      241 ctcgatctgc ggcgccaccg tccgatggac gatttccggc tgattcaccg cgccggcctg
      301 atcgcgctgc tggagcgggc ggcgcgcgat gccggggccc gtatcgcgct tggccggaat
      361 gtcgaagtcc caccccaggg gccgctggtc atcggcgccg acggtctgca cagccaggtc
      421 cgcagggtgc tgaacggccg cgaagtgcct ttctttacaa ggaacaccgc atggcgcgcg
      481 gtgatccgcg atcccggcgg cgcaccagag gcgcaggtct tcatggggcc gcgccgccac
      541 ctcgtcagct atccgctgac aggaggcctg cgcaatatcg tcgccgtcca ggaacgcgat
      601 gcatggcagg ccgaaggctg gtcccatccc gacgatccgg cgcaactgcg cgcggccttc
      661 gccagcttcg gcggcccggt gccgggctgg ctgggcgagg tcgaatcggt ccatatctgg
      721 ggcctcttcc ggcatcaggt cgcccgctgc tggcaggatg gcaggctggt cctgatcggc
      781 gacgcggccc acccgacgct gcccttcatg gcccagggag cggtcatggc catcgaggat
      841 gcctggatcc ttgccgcctg cctggacgag aatcccgacc agaaatcggc ccttgcccgc
      901 ttcgaaaccc tgcgcaaacc ccgcgccagc cgggtcgtcg cggccgccaa tgacaatgcg
      961 cgaaactacc atctgaccgg ggccaggcgc gtcgcggccc atgccgccct gcgtctcgca
     1021 aaccgcctcg cgcccgatcg gatgctggcc cgcttcgact ggctctatga ctacgatccc
     1081 acggcaggat cggcctgacc tcgccctctt tccaaatacc tcgcgggggt ccgggggcgc
     1141 gaagcccccg gccgtcgcgg gacgcaggaa tcaggccgcc ctttcgaccg ccgccacgat
     1201 cccgtccacg acctcgcgca gcatatcctc gttttcggcc tctgccatga cccggatcag
     1261 cggttcggtg cccgatttgc ggatcagcac gcggccagac ccggcaagcc gcgcctcggc
     1321 ctgggcaatg acggcgcgga cggcctcggc cgacaggggg tcggcgcccg cggcgtatcg
     1381 cacgttcttc agcagttgcg gcaccggatc gaattgtgcc gcaagcgcgc tggcgctgtc
     1441 gccgatctcg gacatcgcgg ccagaaactg catcgccgcg atcagcccat cgccggttgt
     1501 ggcatagtcg gtcatcacga tatggcccga ttgctcgccg cccaggttga agccgccctc
     1561 gcgcatcttt tcgaccacgt agcgatcgcc gacacgggtc cgttccagct tcagggcatg
     1621 acccgacagg aaatgctcca gccccagatt ggacatgacg gtggcgacca gcgccccgcc
     1681 gcgcagccgg ccctgcgccg cccagcggga tgccagcagc gccatgatct gatcgccatc
     1741 ggccaagcgc ccggtctcgt cgatgatcgc cacccggtcg gcatcgccat cgaggctgat
     1801 ccccagatct gcgccatggt ccagcaccgc ggcggcgcag gcttcgggat gggtgctgcc
     1861 gacgccggca ttgatgttgc ggccgtcggg atcgacgccc agcgggatca cctcggcgcc
     1921 cagttcccac aagacctcgg gcgccgcccg ataggccgcg ccattggcgc aatcgacgac
     1981 gaccttcagc ccgtccagcc gctgcccggc cgggaaggtg gtcttggcat attcgacata
     2041 gcgcccgcga ccgtcatcga cccgcctggc gcggccgatg ttgttcggct gcgccggttc
     2101 gatctcgcct gcgacgatgg cctcgatctc tgcctcggcc tcgtcggaca gcttgaagcc
     2161 gtcggggccg aagaacttga tcccgttgtc atcggccggg ttgtggctgg ccgagatcat
     2221 gatccccaga tccgcccgca tcgaccgggt caggaaaccc accgccggcg tcggcaccgg
     2281 acccagcagc aatacgttca tgccggtgct ggtcaatccc gccgtcagcg cgttttccag
     2341 catgtagccc gattgccgcg tgtccttgcc gatcaccacc cggtgccggt tgcgcccgtc
     2401 gcggcggaaa tatcgcccgg ctgcggcacc cagccgcagc gccatctcgg cggtcatcgg
     2461 atgggtattg gcgcgtccgc gcaccccgtc cgttccgaat aatcctctgc tcattcctct
     2521 gccttttcgt tctggtcaag agcccgccac aggcgcagcc cctgatctgt gcccgccacg
     2581 tcatgcacgc ggtggatctg gatgccctgc gc
//
LOCUS       DTVW01001203            1173 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2449643, whole
            genome shotgun sequence.
ACCESSION   DTVW01001203 DTVW01000000
VERSION     DTVW01001203.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1173)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1173)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1173
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2449643"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..841)
                     /locus_tag="EYO87_15975"
     CDS             complement(<1..841)
                     /locus_tag="EYO87_15975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009803500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-dependent synthetase"
                     /protein_id="HIC67459.1"
                     /translation="MFQPGSDIQRTSTLTSFLKGCGIDSYEELVRRSNEDPDWFWGQI
                     IDHAGIRFARPYSRLRDISEGPESIRWAVGSTLNLTETCLDARIADGLGDKVAIDWVG
                     EDGSRRRWTYSDLTAEASRVASALATRGVRPGQAVGIYMPMIPEIEAALLGIARLGAV
                     AVPLFSGFAPHAIVSRLNDADAVAVLTADATPRRGKPVWMEATLAQALTDVPSVHTVI
                     SLRRFGDAVADPARDLDWTETVGRASPEFAAVPVSADDTFLIAYTSGTTGRPKGVGHT
                     HLGV"
     gene            complement(955..>1173)
                     /locus_tag="EYO87_15980"
     CDS             complement(955..>1173)
                     /locus_tag="EYO87_15980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009803499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HIC67460.1"
                     /translation="VAPGPTDTPLFAQVAEGEAGQKIAEGLKRAIPMKRLAQPTDYPG
                     IICFLSSDDAGFITGQVISVSGGLSMHG"
BASE COUNT          233 a          371 c          370 g          199 t
ORIGIN      
        1 gcacgcccaa atgggtatgc ccgacaccct tgggccgccc ggtggtgccc gatgtatagg
       61 cgatgagaaa ggtgtcatcg gcactgacgg gaacggcggc aaactccgga ctggcgcggc
      121 ccactgtttc ggtccagtcc agatcgcggg ccggatcggc caccgcatcg ccgaaccgtc
      181 gcaggctgat cacggtatga accgatggta cgtcggtcaa agcctgggca agggtcgctt
      241 ccatccagac cggcttgcct cgccggggtg tggcatccgc cgtcaacacc gccacggcat
      301 ccgcgtcgtt caggcgcgat acgatggcat ggggcgcaaa accggaaaac agcggcaccg
      361 caaccgcgcc cagccgggca atacccagaa gcgcggcctc gatttcgggg atcatcggca
      421 tatagatgcc caccgcctga ccgggcctta caccgcgcgt ggcaagggcc gaggcgacgc
      481 gggaggcttc ggcggtaagg tcggaatagg tccagcggcg gcggcttccg tcttcgccga
      541 cccagtcgat tgcgaccttg tcgcccaggc catcggcaat tcgggcgtca agacaggttt
      601 ccgtcagatt caaagtactc ccgacggccc accggatcga ttcgggccct tcggagatat
      661 ctcgcaaccg gctgtagggc cgcgcgaacc gtatcccggc atggtcaatg atctggcccc
      721 agaaccagtc tgggtcttca ttcgaacggc ggacgagttc ctcgtaactg tcaatgccgc
      781 agcccttcag aaatgaggtc agcgtgcttg tccgctggat gtcagagcct ggctgaaaca
      841 ttcgcaacct ttctagaatg aaaaagggcc gcacataagg cgcggccagt cggggaggta
      901 actcttggca cggtatggca gcagcgcctt gagtccggcg ctgctgccag cgttttaacc
      961 gtgcatggac aggccgcccg aaaccgaaat cacctggccg gtaatgaacc ctgcgtcgtc
     1021 cgacgacagg aagcagatga tgccagggta atccgtcggc tgcgcaagac gcttcatcgg
     1081 aatcgcccgc ttgagacctt cggcgatctt ttgaccggcc tcgccctcgg caacctgagc
     1141 aaacagcggc gtatcggtcg ggccgggggc gac
//
LOCUS       DTVW01001204            5810 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2450075, whole
            genome shotgun sequence.
ACCESSION   DTVW01001204 DTVW01000000
VERSION     DTVW01001204.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 5810)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5810)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5810
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2450075"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            406..1590
                     /locus_tag="EYO87_15985"
     CDS             406..1590
                     /locus_tag="EYO87_15985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005848960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite oxidase"
                     /protein_id="HIC67461.1"
                     /translation="MKVIQNVKRRHFLIGSAGAFGAAAVGGPAIGQDNGTALPDYVAW
                     KDADDLIVHSKQTLETKRAAQGAELITPSTDLYIRNNLPAPSEDIVADRDAWEIEIDG
                     VANPGTMTVGQLKTLAVETVVCVLQCSGNGRAFFDHETSGTQWSVGAAGNVVWTGVPV
                     RAVIDAMGGASDGAVYLTGTGGEDIPEGVPKETLQVERSVPKAAMDQAILAWEMNGEP
                     LPLAHGGPVRLVIPGYYGVNNVKYLKRLALTTEESPAKIQQTGYRVRPVGEKGDPSQP
                     SMYEMSVKSWITGPLMDAATGKVQIHGVAMGGVSDLEKVEVSTDGGQSWTDAQFLGPD
                     LGRYAWRPFVLITELSEGTQTLASRATAKDGTSQPETFPPNERGYGNNGWRVHAVDVT
                     VS"
     gene            1647..2042
                     /locus_tag="EYO87_15990"
     CDS             1647..2042
                     /locus_tag="EYO87_15990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009824386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HIC67462.1"
                     /translation="MTTSTTPVLGAAFLALAAGPALAEADLEAGRTIFTETAQPSCAV
                     CHALSDAGSEAEIGPNLDQFKPTAAQVRAAVTSGIGVMPAFADMLTAGQIDTVAAYVA
                     QVTGGAEGAAQPAMEGQTSSGAVAPATPD"
     gene            complement(2039..2779)
                     /locus_tag="EYO87_15995"
     CDS             complement(2039..2779)
                     /locus_tag="EYO87_15995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67463.1"
                     /translation="MNELADSDWTLINAYHDGELGQAEARDLESRMARDPALVRALNQ
                     VRHVSASLAALRPESRAEVFRRDFAAANARRFPRRWLAGAAAAAAVAVAIVFGSGFLA
                     EPTPIRIHAAFMDQSFAVGDRDLRTIAGKDPWGVPDLSGANLVPVAVASFEAGQVTHY
                     AGRNGCRLSYFRGSFRIGDDDRAAGQQVASWTTNADLRHMVVATGMDRARFDAVVAYL
                     QQVTRQGATESVLASLTQATRNASACLG"
     gene            complement(2776..3279)
                     /locus_tag="EYO87_16000"
     CDS             complement(2776..3279)
                     /locus_tag="EYO87_16000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009824384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HIC67464.1"
                     /translation="MAQLTQIEILLPELRAYAVAICTSRSDAEDLVQDAVERGLRSDR
                     RPARLDQLRPWMFRTIRNLHYDELRKRRVRREYLEAEKRLSEEAGTADAARDALTRLA
                     FEKLPPETREVLCLVDIMGLTYAEAARVMDVPPGTVMSRISRARRALLMIVEGAQVVE
                     SGAGRKT"
     gene            complement(3370..3978)
                     /locus_tag="EYO87_16005"
     CDS             complement(3370..3978)
                     /locus_tag="EYO87_16005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010392473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septation protein IspZ"
                     /protein_id="HIC67465.1"
                     /translation="MKEPNPLVKSALELGPLLLFFGVFMWNRGGTVSLWGQDYTALVF
                     ATLIFIPVLAIATLIQWRLSGRLAPMQVVTLVLVVIFGGLSVWLNDPRFFKMKPTIIY
                     LLFAAILGYSLVARRNWLQAVLSEALPMDALGWRKLTMRMMLLFLGLALANEFVWRMM
                     SETSWVYFKTFGLPLILFVFLIANAGLYRAHAVESEKDDEQG"
     gene            complement(4001..4900)
                     /locus_tag="EYO87_16010"
     CDS             complement(4001..4900)
                     /locus_tag="EYO87_16010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011568159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug transporter"
                     /protein_id="HIC67466.1"
                     /translation="MSEWIIQIAGTPEGARLASVLALGAAFLHALFGSLQKGRHDPWI
                     SRAAIDLSYGIMALPIALFVVPWPDPGLWPVLFGAMGIHVFYKIAQALTYTRGAYTVV
                     YPVVRGTGPLFAVIAAGVVFGEHFNAVQWLGVGLLVGGIFGLAAYNRSRLVLGRETLG
                     PALAWAVVTGGFVALYTTYDAWGIRLAANPFTFLAWFFVLDSFFMPIWNLRRLIALTA
                     PEVPALAMRGIFGALVAFASFGAIMLATRIDDVGRAAVLRETSTVFAALVGWLVLGEK
                     VGVARAILMAVIASGALVVEFAS"
     gene            complement(4946..>5810)
                     /locus_tag="EYO87_16015"
     CDS             complement(4946..>5810)
                     /locus_tag="EYO87_16015"
                     /inference="COORDINATES: protein motif:HMM:PF06764.9"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF1223 domain-containing protein"
                     /protein_id="HIC67467.1"
                     /translation="AAGQAQEGGPGGAGNDLSAPVISAPDDPGRAAPGALSRDDFLSG
                     GGFNSFAASEAPPTDSFLPPSLPVVVELFTAQGCSTCPPADAMLEKMAAMPGVLPLSF
                     NVDYWDYLGWTDSFASPDFTRRQEGYARASGEHALYTPQIIVDGRDTAVAPGPAQLMA
                     MIDENRISPAMLSVQRESGDDGERIELTPLSDLGGPVVVVLVRYAPNRAVEVTAGENS
                     GRVVSYTNVVLSISKLAKWDGTAPLRLNVRPDESGPQDFPPDTRHVLLVQRGIGPDEL
                     PGPILAAIKLD"
BASE COUNT         1087 a         1981 c         1852 g          890 t
ORIGIN      
        1 cctgccggcg gggtcacgcc ccggcctcgg cagcggcgac gcgggccaag ctccgcgaac
       61 ggcgccgcaa tcgggatccc gaacgctctc acccgcttct ctcctccggc agtcacatca
      121 tcacattgct tgattgtccg ttcgtgttca atcgtttcga ccccaggatc gcaccgtccg
      181 ggcaaggacg cgcgcgcccc ggccgagccc ggcaaatggc ccggcaatcg gggcggatga
      241 ccgggcacag cccgcgaccg ttttcaccgg caggctcgat cggcagcctg cttcggccgg
      301 tttattccgc gcaagctgga ataatacgca gccctggcac gtctcttggt tacggggctg
      361 tcgcataccg tggtgccgcg gctccgaacc acgggaggaa agccaatgaa agtgattcag
      421 aacgtgaaac gccgccactt cctgatcgga tcggcgggcg cctttggcgc cgcggccgtc
      481 ggtggaccgg ccatcggtca ggacaacggg accgcgcttc ccgattacgt cgcctggaag
      541 gatgccgacg atctgatcgt ccattccaag cagacgctgg agacgaagcg cgcagcccag
      601 ggggcggaac tgatcacgcc cagcacggat ctctatatcc gcaacaacct gccggccccg
      661 tccgaagaca ttgtcgccga ccgcgatgcc tgggagatcg agatcgacgg cgtcgccaat
      721 ccgggcacga tgacggtcgg ccagttgaag acgctggcgg tcgagacggt ggtctgcgtt
      781 ctgcaatgtt cgggcaacgg acgcgccttt ttcgatcacg agaccagtgg cacgcaatgg
      841 tcggtcggtg cggcgggcaa tgtcgtctgg acgggcgtgc cggtgcgcgc ggtcatcgac
      901 gccatgggcg gcgccagcga cggcgcggtc tatctgaccg gcacgggcgg cgaagacatt
      961 cccgagggcg tcccgaagga gacgcttcag gtcgagcgtt cggttccgaa ggccgcgatg
     1021 gatcaggcga tcctggcctg ggaaatgaac ggcgagccgc tgcccctggc gcatggtggc
     1081 ccggtgcggc ttgtgattcc gggctattac ggcgtcaaca acgtcaagta tctcaagcgg
     1141 ctcgccctga cgaccgagga atcgccggcc aagatccagc agaccggcta tcgcgtccgc
     1201 cccgttggcg agaagggcga tccctcgcag ccctcgatgt acgaaatgag cgtcaagtcc
     1261 tggatcaccg ggccgctgat ggacgccgcc accggaaagg tgcagatcca tggcgtcgcc
     1321 atgggcggcg tcagcgatct ggagaaggtc gaggtctcga ccgacggcgg ccagagctgg
     1381 accgatgcgc agtttctcgg gccggacctg ggtcgctatg cctggcggcc cttcgtgctg
     1441 atcaccgagc tttcggaggg aacgcagact ctggcaagcc gggcgacggc gaaggacggg
     1501 accagccagc ccgagacgtt cccgcccaac gagcgtggct acggcaataa cggctggcgc
     1561 gtccatgccg tcgatgtgac cgtcagctag gattcccggc cggcggacca tcccgccggc
     1621 tcgaccgccc caccaggagc catcacatga ccacatccac gacgccggtt cttggcgccg
     1681 ctttccttgc gcttgccgcc ggcccggcac tcgccgaggc cgatctggag gccgggcgca
     1741 ccatcttcac cgaaaccgcg cagccctcat gcgctgtctg tcacgcgctg agcgatgccg
     1801 gatccgaagc cgagatcggc ccgaacctgg accagttcaa accgaccgcc gcgcaggtcc
     1861 gcgccgccgt caccagcgga atcggcgtca tgccggcatt cgccgatatg ctgaccgcgg
     1921 gccagatcga caccgtcgcc gcctatgtgg cccaggtgac cggcggggcc gagggcgcgg
     1981 cacagcccgc aatggagggg caaacctcct caggcgcggt cgcacccgcc acgccggact
     2041 agccgaggca agcgcttgcg ttccgggtcg cttgcgtcag cgatgccagg acgctctcgg
     2101 tggccccctg ccgcgtcacc tgctgaagat aggcgacgac cgcgtcgaat ctggcgcggt
     2161 ccattcccgt ggcgacgacc atgtggcgca gatccgcatt cgtcgtccat gacgccacct
     2221 gctggccggc ggcacgatca tcgtcaccga tcctgaatga cccgcggaaa taggacaggc
     2281 gacatccgtt ccggcccgcg taatgcgtca cctgccctgc ctcgaagctt gcgacggcga
     2341 ccggcaccag gttggcaccc gaaagatccg gcacgcccca cggatccttc ccggcgatcg
     2401 tgcgaagatc gcggtcgccg acagcgaagc tctggtccat gaacgcggca tgaatccgga
     2461 tcggcgtcgg ttcggccagg aatccggacc cgaagacgat cgcaacagcg acagccgccg
     2521 cggccgcagc gcccgccagc caccttcgcg gaaaccgcct ggcattggcc gcagcgaagt
     2581 cgcgacggaa tacctcggcc cgcgattcgg gccgcagcgc cgcaaggctg gccgagacat
     2641 ggcgcacctg gttcagggcc cggacaaggg ccggatcccg cgccattcgc gattccagat
     2701 cacgcgcctc ggcctggccc aattcgccgt catggtaggc gttgatcaaa gtccagtcgc
     2761 tgtcggccaa ttcgttcatg tcttccgccc tgctccgctt tccaccactt gggcgccttc
     2821 cacgatcatc agaagcgccc gccgcgcccg gctgatccgg ctcatcaccg tgccgggcgg
     2881 cacatccatc acccttgccg cctcggcgta tgtcagcccc atgatgtcca cgagacacag
     2941 cacctcccgc gtctcgggcg gcagtttttc gaaggccagc cttgtcagcg catcgcgcgc
     3001 ggcatccgcg gttcccgctt cttcggatag acgtttctcc gcctccaaat attcccgacg
     3061 cacacgtctt ttcctgagtt cgtcgtagtg caggttcctg atcgtgcgga acatccaggg
     3121 ccgaagctgg tccaggcgcg ccggccggcg atccgaacgc agaccacgct cgaccgcgtc
     3181 ctggacaaga tcctcggcat cgctgcgcga ggtgcagatc gcgacggcat aggcccgaag
     3241 ttcgggaagc aggatctcga tctgcgtcag ttgggccatg atcctgtcta accgatccgg
     3301 gaatccgcta aaagacattc gaccgggggt cgatcgccgc gcggcgatcg agacagtcgc
     3361 gtgcggggct cagccctgct cgtcgtcctt ttcgctctcc accgcatgcg cgcgatagag
     3421 accggcattg gcgatcagga agacgaacag gatcagcggc aggccgaagg tcttgaaata
     3481 gacccaggat gtttcggaca tcatgcgcca gacgaactcg ttggccagcg cgagaccgag
     3541 gaacagcagc atcatgcgca tggtcagctt gcgccagccc agggcatcca tcggcagcgc
     3601 ctcggacagg accgcctgca accagttgcg ccgcgcgacc aggctgtagc ccaggatcgc
     3661 ggcgaagagc agatagatga tggtgggctt catcttgaaa aagcgtgggt cgttcagcca
     3721 gaccgacagc cccccgaaga tcaccaccag aaccagcgtc acgacctgca tgggcgcaag
     3781 cctgccgctg agacgccact ggatcagggt cgcgatggca agaaccggaa tgaagatcag
     3841 cgtggcaaag accagcgccg tgtaatcctg tccccacagg ctgacggttc cgccgcggtt
     3901 ccacatgaag acgccgaaaa acagaagcag cggccccagt tccagcgccg atttcactaa
     3961 gggattcggt tccttcatca tcttcctttc ggcgccacga tcaggacgcg aattccacca
     4021 ccaaagcgcc cgaagcgatc accgccatca ggatcgcgcg cgcgacgccc accttttcgc
     4081 ccagcacgag ccagccgaca agggccgcga agacggtcga ggtttctcgc agcaccgcgg
     4141 cgcggccgac atcgtcgatg cgggtggcca gcatgatcgc gccgaaactg gcgaaggcaa
     4201 ccagggcgcc gaaaattccc cgcatggcca aagcgggaac ctcgggcgcg gtcagcgcga
     4261 tcaggcggcg caggttccag atcggcatga agaacgaatc cagcacgaag aaccaggcca
     4321 gaaaggtgaa gggattggcc gccagcctga tgccccaggc gtcataggtc gtataaagcg
     4381 cgacaaagcc gcccgtgacc acggcccagg ccagcgcggg gcccagcgtc tcgcgaccca
     4441 gaaccaggcg cgatcggtta taggccgcaa ggccgaagat gccgccgacc agcagcccga
     4501 caccaagcca ttgcaccgcg ttgaaatgct cgccaaagac aacccccgcg gcgattaccg
     4561 cgaaaagcgg gccggtcccg cgcaccaccg gatagacgac cgtataggcg ccccgcgtat
     4621 aggtcagcgc ctgcgcgatc ttgtagaaga catggatccc catggccccg aacagcaccg
     4681 gccacagccc cggatccggc cagggaacca cgaacagcgc gatgggcaga gccatgatcc
     4741 cgtagctgag gtcgatcgcc gcacggctga tccagggatc gtgccggccc ttttgcaggg
     4801 acccgaacag cgcgtgcaga aaggccgcgc caagcgccag aaccgatgcc agccgcgcgc
     4861 cttcgggcgt tcccgcgatc tggatgatcc attcgctcat ggtccgctga tgcgaaattt
     4921 ttgcacgccg cgcaagttgt cgcggtcagt ccagcttgat cgccgcgaga atggggccgg
     4981 gcagttcgtc ggggccgatg ccgcgctgga ccagcaggac atgcctggta tcgggcggaa
     5041 aatcctgggg gccgctttcg tccggcctga cattcaggcg caagggcgcc gtgccgtccc
     5101 atttggccag cttgctgatc gacagcacga cattggtata gctgaccacg cggccgctgt
     5161 tctcgcccgc cgtcacctcg accgcgcgat tgggcgcata gcggaccaga accaccacca
     5221 ccgggccgcc caggtccgat agcggcgtca gttcgatcct ttcgccatca tccccgcttt
     5281 cgcgctgcac gctgagcatc gccggagaga tccggttctc gtcgatcatc gccatcagct
     5341 gcgcgggacc gggggcgact gcggtgtcgc ggccgtccac gatgatctgc ggcgtgtaaa
     5401 gcgcgtgttc gcccgaggcc cgggcatagc cttcctggcg gcgggtgaag tcggggctgg
     5461 cgaagctgtc ggtccagccc agataatccc agtaatcgac gttgaacgaa agcggcagaa
     5521 cgcccggcat ggcggccatc ttttccagca tcgcgtcggc gggcggacag gtcgaacagc
     5581 cctgcgcggt gaaaagctcg accaccaccg gcagcgaggg cggaaggaaa ctgtccgtcg
     5641 gcggcgcctc ggatgcggcg aaactgttga agccgccgcc ggacaggaaa tcgtcccggc
     5701 tcagcgcgcc gggcgccgcc cggcccggat catcgggcgc ggaaatgacg ggcgcggaca
     5761 gatcatttcc cgcgccgccc ggcccgcctt cctgggcctg accggcggca
//
LOCUS       DTVW01001205            2702 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2450207, whole
            genome shotgun sequence.
ACCESSION   DTVW01001205 DTVW01000000
VERSION     DTVW01001205.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2702)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2702)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2702
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2450207"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..363)
                     /locus_tag="EYO87_16020"
     CDS             complement(<1..363)
                     /locus_tag="EYO87_16020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009573216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF924 domain-containing protein"
                     /protein_id="HIC67468.1"
                     /translation="MKTAQDIHDFWFSDQMRSHWFKKSDQIDRRIIQLFGETYEAAHG
                     GRLDHWMRHPQGALALVIVLDQFPRNMFRGSGRSFESNDLALRHAGAALDHGFDQQVE
                     ATARQFFYLPFMHSEDLQD"
     gene            complement(437..1198)
                     /locus_tag="EYO87_16025"
     CDS             complement(437..1198)
                     /locus_tag="EYO87_16025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HIC67469.1"
                     /translation="MTKRGIDHVALTVRDLPGMADFYQAVIGLAPLGGDGETRRLGAG
                     GRLLLELRADPAAKPRDPRHAGLFHTAFLLPGRADLARWLRHAESTGTRLSGASDHGV
                     SEALYLDDPEGNGIEIYRDRPADQWNRDGDRIGMFTRRLDLDDLAGVADGPWRGAPED
                     SLVGHVHLQVGELPPAEDFMRGDLGLNRTFEAPGGAWYGWDGYHHHLACNVWNSRAAG
                     HRDPAMAGLAEVVLADPARSGAVMTDPWGTRFRVV"
     gene            complement(1195..1815)
                     /gene="mobA"
                     /locus_tag="EYO87_16030"
     CDS             complement(1195..1815)
                     /gene="mobA"
                     /locus_tag="EYO87_16030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011746382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor guanylyltransferase MobA"
                     /protein_id="HIC67470.1"
                     /translation="MERFPAIILAGGRATRMGGGDKPLLDLGGRPMLAHVIVRLSRQC
                     GPLALNANGDPARFAAFGLPVLADDLPGFPGPLAGILAGMEWAAAVGAASVVSVAADT
                     PFFPADLATRLARARTDAGPVIAATQDASGALADHPTFGLWPVALRDPLRRFLKAGQR
                     RLRDFAARHDAGRAVWKTAAIDPFFNINTPEDLARARAGPGERSSG"
     gene            1981..2667
                     /locus_tag="EYO87_16035"
     CDS             1981..2667
                     /locus_tag="EYO87_16035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009571037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HIC67471.1"
                     /translation="MSDLGSSLAALPPIGLIRDGGWTMWLIAALSVATLAVILWKLWA
                     LWRLGVWGGRHSRRALELWMQGRHAEALAAVRNRPSARARVAQAAIGTSLDPAIGEKA
                     AREETTRIARQTLYRAREGLRALELIATIAPLLGLLGTVLGMIAAFQVLQSSGNRADP
                     ADLAGGIWEALLTTAAGMAVAIPAGVALSWFESVADRLQADLEDLATRIFVRRPAPGR
                     PAARLFEAAE"
BASE COUNT          419 a          949 c          916 g          418 t
ORIGIN      
        1 atcctgcaga tcctcgctgt gcatgaaggg caggtagaag aactgccgcg cggtcgcctc
       61 cacctgctga tcgaaaccat gatccagcgc ggcgcccgca tgccgcagcg ccagatcgtt
      121 gctttcaaag ctgcgccccg atccgcggaa catgttgcgc gggaactggt ccagcacgat
      181 gacaagggcc agagccccct gcggatgccg catccagtgg tccagccggc cgccatgcgc
      241 cgcctcgtag gtttcgccga aaagctggat gatccggcgg tcgatctggt ccgacttctt
      301 gaaccagtgg ctgcgcatct ggtccgagaa ccagaaatcg tggatatcct gagcggtctt
      361 gatcgccatc gccgggccct tccgtcgcat atttcgcctt gctcagcctc ggtcctgcgc
      421 tgccgggttg caagcgtcag acgacgcgaa agcgcgtacc ccagggatcg gtcatcaccg
      481 cgcccgaacg cgccggatcg gccagcacca cctcggccag tccggccatc gccggatcgc
      541 ggtggccggc ggcgcggctg ttccagacat tgcaggccag atgatggtga tagccgtccc
      601 agccatacca ggccccgccc ggagcctcga atgtccggtt cagccccaga tcgccccgca
      661 tgaaatcctc tgccggcggc agttcgccca cctgcaaatg gacatggccg acaaggctgt
      721 cttcgggcgc cccccgccac ggcccgtccg ccacgccggc cagatcgtcc agatccagcc
      781 ggcgggtgaa catcccgatc cggtcgccgt cgcgattcca ttggtccgcg ggacgatcgc
      841 gatagatttc gatgccgttg ccctcggggt catccagata cagcgcctcg ctgacgccat
      901 gatcgctggc cccgctcaac cgtgttccgg tgctttccgc gtgacgcaac cagcgcgcca
      961 gatcggcgcg gccgggcagc aggaaggcgg tatgaaacag ccccgcatgg cgcggatcgc
     1021 gcggtttcgc ggccggatcg gcgcgcagtt ccagcagcag ccgcccgccc gcgcccagcc
     1081 ggcgggtttc gccgtcgccg cccagcggcg caaggccgat gaccgcctgg taaaaatccg
     1141 ccatgccggg caggtcgcgc acggtcagcg cgacatgatc gattccgcgt ttcgtcatcc
     1201 ggagctcctt tcgccggggc cggcgcgggc ccgcgccaga tcctcgggtg tgttgatgtt
     1261 gaagaaggga tcgatcgcgg ccgttttcca gaccgcgcgt ccggcatcgt gacgcgcagc
     1321 gaaatcgcgc agccgccgtt gtcccgcctt caggaaccgg cgcaggggat cgcgcagcgc
     1381 gacgggccag aggccgaagg tcggatgatc ggccagcgcg cccgaggcat cttgcgtggc
     1441 ggcgatgacc ggcccggcat ccgtccgcgc gcgcgccagg cgcgtggcca gatccgcggg
     1501 aaagaagggg gtgtcggcgg cgacgctgac cacgctggcc gccccgacgg ccgccgccca
     1561 ttccatcccc gccaggatcc ccgccagcgg accgggaaat ccgggcaggt catcggccag
     1621 aaccggcagg ccgaacgcgg cgaatcgcgc cggatcgcca ttggcgttca gcgccagcgg
     1681 accgcattgc cgcgacagcc gcacgatgac atgggccagc atcggccgac cgcccagatc
     1741 cagcagcggc ttgtcgccgc cgcccatccg ggtggcgcgg cctccggcca ggatgatcgc
     1801 gggaaaacgc tccatcgcgt aagcctgccc gcagccatga gccgctgcaa gaccccgccg
     1861 atgcgcgcgc cgcattactt gacaaattta gtcgaaaacc ctagcgcgac ttgaaaggcc
     1921 agtgttccgc ttgccccgcg caggttttcc gccaatcctg ccccgaaccg gagttgagtc
     1981 atgtccgatc taggatcgag ccttgccgcg ctgccgccga tcggcctgat ccgcgatggc
     2041 ggctggacga tgtggctgat cgcggcgctg tcggtcgcca cgctggcggt gatcctgtgg
     2101 aagctgtggg cgctgtggcg tctgggcgtc tggggcggcc gccattcgcg ccgggcgctg
     2161 gaattgtgga tgcagggccg ccatgccgag gctttggccg cggtgaggaa tcgcccctcg
     2221 gcgcgcgcgc gcgtggcgca ggcggcgata ggcacctcgc tggatccggc catcggcgaa
     2281 aaggccgcgc gcgaagaaac cacccgcatt gcccgccaga ccctgtatcg cgcgcgcgag
     2341 ggattgcggg cgctggaact gatcgcgacc atcgcgccgc ttctgggtct gctgggcacg
     2401 gtgctgggca tgatcgcggc cttccaggtg ctgcaaagct cgggcaaccg agccgatccc
     2461 gcggatctgg cgggcggcat ctgggaggcg ctgctgacca ccgccgccgg catggccgtg
     2521 gcgattccgg cgggcgtggc gctgagctgg ttcgaatcgg tggccgaccg gttgcaggcc
     2581 gatctcgagg atctggcgac gcggatcttc gtgcgtaggc cggcacccgg ccgccccgcc
     2641 gcccggctgt tcgaggcggc ggaatgaccg gcggcttcga tttcgggccg cgccggcatc
     2701 ca
//
LOCUS       DTVW01001206            1346 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2450720, whole
            genome shotgun sequence.
ACCESSION   DTVW01001206 DTVW01000000
VERSION     DTVW01001206.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1346)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1346)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1346
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2450720"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..365
                     /locus_tag="EYO87_16040"
     CDS             <1..365
                     /locus_tag="EYO87_16040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012180008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67472.1"
                     /translation="GGIRCEKSTNYLLSQGVENVFHLRGGILKYLEDVPEPDSLWRGE
                     CFVFDRRVSLGHGLKQGRYGLCHACRRPLAPGDRARPDYEEGVSCHRCADEYDDADRA
                     RFRERQRQFDLARHRNAG"
     gene            468..848
                     /locus_tag="EYO87_16045"
     CDS             468..848
                     /locus_tag="EYO87_16045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009806115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family membrane protein"
                     /protein_id="HIC67473.1"
                     /translation="MSERAIGDLLDLLGRLLIAVLFAGGAIQKLTDPAAVQQLLDLAG
                     LPGVLVWPLAAMNLAAALGLLLGPKVTWWALLLAAYCIATSWFHWQLRADPWQVTIVV
                     KNWSIAGGLLILAANGPRRFVIWR"
     gene            complement(855..>1346)
                     /locus_tag="EYO87_16050"
     CDS             complement(855..>1346)
                     /locus_tag="EYO87_16050"
                     /EC_number="1.1.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999645.1"
                     /note="NADP-dependent; catalyzes the oxidative
                     decarboxylation of malate to form pyruvate; decarboxylates
                     oxaloacetate; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent malic enzyme"
                     /protein_id="HIC67474.1"
                     /translation="LIGDTLVHEWPEAEDLADIATRGAHVARGLGLDPRVAFLSFSNF
                     GYPISERAIKMAEAPEVLDARGVDFEYEGEMTVDVALNMDAAARYPFIRLTGPANVLV
                     VPARHSASISVKLMQEMAGATVIGPILTGVPKPIQICSTNSTVNDILNMAAIAAGGLG
                     QTR"
BASE COUNT          211 a          436 c          456 g          243 t
ORIGIN      
        1 ccggcggcat ccgctgcgag aaatccacga attacctgct gtcccagggc gtcgagaatg
       61 tcttccacct caggggcggt atcctgaaat atctcgaaga cgtgcccgag cctgacagcc
      121 tgtggcgcgg cgaatgtttc gtcttcgacc ggcgcgtcag cctgggccac ggcctgaagc
      181 aggggcgata cggattgtgc cacgcctgcc gccgcccgct ggcgcccggc gaccgcgcaa
      241 ggccggacta cgaggaaggc gtctcgtgcc atcgctgcgc ggatgaatat gacgacgccg
      301 accgcgcgcg attccgcgaa cgccagcggc aattcgatct ggcacgccac aggaacgcgg
      361 gatgagccgc tgttcccttt tccggcaatc gctggcagcc attggcatac cgggaattgc
      421 ggacgaccgg atcgttgacc cggacccgct gcgggcaggg cgctgagatg tcggaacgcg
      481 cgatcggtga tcttctggat cttctgggcc ggttgctgat cgcggtcctt ttcgcgggcg
      541 gggcgatcca gaaactgacc gatccggcgg ccgtccagca attgctggat ctcgcggggt
      601 tgccgggcgt tctggtctgg ccgctggcgg cgatgaatct ggccgcggcc cttggtctgt
      661 tgctggggcc gaaggtgacc tggtgggcgc tgctgcttgc cgcctattgc atcgcgacaa
      721 gctggttcca ctggcagttg cgggccgatc cctggcaggt gacgatcgtg gtcaagaact
      781 ggtccatcgc gggcgggctg ctgatcctgg cggccaacgg tccacgccgc ttcgtgatct
      841 ggcgatagcg cggctcagcg cgtctggccc agcccgccgg cggcgatggc agccatgttc
      901 aggatgtcgt tcacggtcga gttggtggaa cagatctgga tcggcttcgg cacgcctgtc
      961 aggatcggcc cgatcaccgt cgcgcccgcc atttcctgca tcagcttgac gctgatcgag
     1021 gccgaatgcc gcgccggcac gaccagcaca ttcgcgggtc cggtcaggcg gatgaacgga
     1081 tagcgcgcgg cggcatccat gttcagcgcc acgtccacgg tcatctcgcc ctcgtattcg
     1141 aaatcgacgc cgcgtgcgtc cagcacctcg ggcgcctcgg ccatcttgat cgcgcgttcg
     1201 ctgatcggat agccgaaatt cgagaaggac aggaaggcca cgcgcggatc gaggcccagc
     1261 ccccgcgcca catgcgcgcc gcgggtggcg atatcggcca ggtcctcggc ctcgggccat
     1321 tcatggacca gcgtgtcgcc gatcag
//
LOCUS       DTVW01001207            1214 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2453107, whole
            genome shotgun sequence.
ACCESSION   DTVW01001207 DTVW01000000
VERSION     DTVW01001207.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1214)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1214)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1214
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2453107"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..405)
                     /locus_tag="EYO87_16055"
     CDS             complement(<1..405)
                     /locus_tag="EYO87_16055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020039630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyanophycinase"
                     /protein_id="HIC67475.1"
                     /translation="MSMPTTHGTKGPLVAIGGAEDKTSRADILRRVLAVSGKTAPVVG
                     VITTASSTPGEVFESYRTAFSAIGAGEVVDIRIRERQDAASDDIVGMIRRSDVIFISG
                     GDQMRLTNILGATAALEAIRARHAEGAVIAGTS"
     gene            580..>1214
                     /locus_tag="EYO87_16060"
     CDS             580..>1214
                     /locus_tag="EYO87_16060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008229642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-aspartyl-peptidase"
                     /protein_id="HIC67476.1"
                     /translation="MSETARARGFSLAIHGGAGVMPRDSMTPDREARLHAALTRVLDA
                     GEAVLSRDGSALDAVTAAVCMLEDEPLFNAGRGAVFTRDGRQEMDAAVMDGRDRSAGA
                     VAGIFGPRNPILAARAVLEHTDHVLMIGDGALAVARAAGLEFCTEDHFFTQDRHDALQ
                     ETLKMEQQGRLDDDPARRHGTVGAVARDRHGALAAATSTGGMTAKRSGRVG"
BASE COUNT          207 a          405 c          402 g          200 t
ORIGIN      
        1 gctggtcccc gcgatcaccg cgccctcggc atggcgggcc cgaatcgcct ccaatgcggc
       61 agtcgcgccc agaatattcg tcagccgcat ctggtcgccg ccagaaatga agatgacgtc
      121 cgaacgccga atcatcccga cgatatcatc cgacgccgca tcctggcgtt cgcggatccg
      181 gatatccacg acctcgcccg cgccgatcgc ggaaaacgcg gtgcgatacg attcgaacac
      241 ctcgcccgga gtgctgctgg cggtcgtgat cacaccgacc accggcgccg tctttcccga
      301 aacggccagc acgcggcgca ggatatctgc gcgcgaggtc ttgtcttccg cccccccgat
      361 cgcgacaagc ggccccttgg tgccatgggt ggtgggcatg ctcatcgact gcgctccgtt
      421 cctcatgaat ggacgttatc ttgtatgtcg gtgtatcacc agcttgccaa tcgacagacc
      481 gtctcgcatt catgcgatgc cgttccgccg atccttgaca tgaaatggtt gatgcgaggt
      541 taggcgaacg ctcatccagc aatgcggagg ccatgtttca tgtccgagac agcgagggcg
      601 cggggattca gtcttgcgat ccacgggggc gcgggggtca tgccgcgcga cagcatgacg
      661 cccgaccgcg aggcgcggct tcatgcggcg ctgacgcgcg tgctggacgc gggcgaagcc
      721 gtgttgtcgc gcgatggcag cgcgcttgac gcggtgacgg cagcggtctg catgctggag
      781 gacgaaccgc tgttcaacgc gggccggggc gccgtcttta cccgcgacgg caggcaagag
      841 atggatgccg ccgtgatgga cggccgcgac cgcagcgcgg gcgccgtcgc cggcatcttc
      901 gggccgagga accccatcct tgccgcgcgc gccgttctgg aacacaccga tcacgtcctc
      961 atgatcggcg atggcgccct tgccgtggcg cgggcggccg ggcttgaatt ctgtaccgaa
     1021 gaccacttct tcacgcaaga tcgccatgac gccctgcaag agacgttgaa gatggagcaa
     1081 cagggcaggc tcgacgacga tcccgcgcgc cgccacggga ctgtcggcgc agtggcccgc
     1141 gatcggcatg gcgcgctggc cgcggcgacc tcgaccggcg gcatgacggc aaagcgatcg
     1201 ggccgcgtcg gcga
//
LOCUS       DTVW01001208            1351 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2455850, whole
            genome shotgun sequence.
ACCESSION   DTVW01001208 DTVW01000000
VERSION     DTVW01001208.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1351)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1351)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1351
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2455850"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..588
                     /locus_tag="EYO87_16065"
     CDS             <1..588
                     /locus_tag="EYO87_16065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007255791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HIC67477.1"
                     /translation="MVETAAILNQADDHALVILDEIGRGTATWDGLSIAWAVMEHLHE
                     VNRCRALFATHYHEMTALSAKLEGVENATVAVREWEGEVIFLHEVRKGAADRSYGVQV
                     ARLAGLPASVVDRARAVLDALESGEREGAARPAALIEELPLFRAVPPAPAPAPSRPKH
                     DPLDARLRDIHPDALSPREALDLIYELKALTGERA"
     gene            585..>1351
                     /gene="aroC"
                     /locus_tag="EYO87_16070"
     CDS             585..>1351
                     /gene="aroC"
                     /locus_tag="EYO87_16070"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008883334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HIC67478.1"
                     /translation="MSYNTFGREFRFTTWGESHGPALGATVDGTPPGVALDETFIQQF
                     LDRRRPGTSKHTTQRRESDQVRILSGTFEGRTTGTPIQLMIENTDQRSKDYGQIATSF
                     RPGHADITYHQKYGLRDYRGGGRSSARETAARVAAGGVARAVLAQLLPDLRIIGYMVQ
                     MGAMHLDRGRFDAAAIRENPFFLPDATAVDAWSDYLDTVRKDQNSVGAAVEVMIRGCP
                     PGLGAPVYAKLDTDLAAAMMSINAVKGVEIGEGMAAAA"
BASE COUNT          225 a          438 c          476 g          212 t
ORIGIN      
        1 atggtcgaga ccgccgcgat tctcaatcag gccgacgatc atgcgctggt gatcctggac
       61 gagatcgggc gcgggacggc gacctgggac gggctttcca tcgcctgggc ggtgatggag
      121 catctgcacg aggtcaatcg ctgccgggcg ctgttcgcga cccattacca cgagatgacc
      181 gcgctgagcg ccaagctgga gggggtcgag aacgccaccg tcgctgtgcg cgaatgggag
      241 ggcgaggtga tctttctgca cgaggtccgc aagggtgcgg ccgaccgcag ctatggcgtc
      301 caggtggcgc ggctggcggg gttgccggct tcggtcgtgg accgcgcgcg cgcggtcctg
      361 gacgccctgg aatcgggcga acgcgagggg gcggcgcggc ctgccgcgct gatcgaggaa
      421 ctgccgctgt ttcgcgccgt gccgcccgcg ccggcacctg cgccgtcgag gccgaagcac
      481 gatccgctgg atgcgcggct gcgcgacatc catcccgatg cgctgagccc gcgcgaagcc
      541 ctggacctga tctatgaact gaaagccctg accggagaac gagcatgagc tataacacct
      601 tcggccgcga attccggttc accacctggg gcgaaagtca cggtccggcc cttggcgcga
      661 cggtggacgg cacgcccccc ggcgtggccc tggacgagac cttcatccag caattcctgg
      721 atcgccgccg ccccggaacg tcgaaacaca cgacccagcg gcgcgagtcc gatcaggtcc
      781 gtatcctgtc gggcaccttc gagggccgca cgaccggcac gccgatccag ctgatgatcg
      841 agaataccga tcaacgcagc aaggattacg gtcagatcgc caccagcttt cgccccggcc
      901 atgccgacat cacctatcat cagaaatacg gtctgcgcga ttatcgcggt ggcggtcgct
      961 ccagcgcgcg cgagacggcg gcgcgggtgg cggcgggcgg cgtggcgcgg gcggttctgg
     1021 cgcagctgct gcccgatctg cggatcatcg gctacatggt gcagatgggc gcgatgcatc
     1081 tggatcgcgg ccggttcgac gccgccgcca tcagggaaaa tccgttcttc ctgcccgacg
     1141 cgacggccgt cgatgcctgg agcgattatc tcgacaccgt ccgcaaggat cagaacagtg
     1201 tcggtgcggc ggtcgaggtg atgatccgcg gctgtccgcc ggggctgggc gcgccggtct
     1261 atgcgaaact ggacaccgat ctggccgccg cgatgatgtc gatcaacgcc gtcaagggcg
     1321 tcgagatcgg cgaaggcatg gctgcggctg c
//
LOCUS       DTVW01001209            1512 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2456790, whole
            genome shotgun sequence.
ACCESSION   DTVW01001209 DTVW01000000
VERSION     DTVW01001209.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1512)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1512)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1512
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2456790"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..788)
                     /locus_tag="EYO87_16075"
     CDS             complement(<1..788)
                     /locus_tag="EYO87_16075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019995757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase"
                     /protein_id="HIC67479.1"
                     /translation="MPLTLSLNTNPLVNRFAEPDDLIDTVARDLRIRDLQLTHEFINP
                     SWPAPVIRRLTRAMGAALQRTGVRVTSGMTGPYGRLNHFGHPDRDVRRHYVDWFKTFA
                     DIIADLGGKSIGTQFAILTYRDHDDPARREDLIRIAIECWAEVAEHGRAAGLDYIFWE
                     PMSVGREFGHTIAECLVLQDRLSAAGMAIPMWMMADIDHGDVTSADPRDHDPYAWARA
                     VPKVSPIIHIKQSLMDKGGHRPFTADFNARGRIQPGPLLAALARG"
     gene            complement(798..>1512)
                     /locus_tag="EYO87_16080"
     CDS             complement(798..>1512)
                     /locus_tag="EYO87_16080"
                     /EC_number="1.1.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018001170.1"
                     /note="in Escherichia coli this homodimeric enzyme is
                     expressed under aerobic conditions; anaerobic expression
                     is repressed by the arcAB system; converts
                     sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy
                     acetone phosphate and ubiquinol-8; associates with the
                     cytoplasmic membrane; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycerol-3-phosphate dehydrogenase"
                     /protein_id="HIC67480.1"
                     /translation="EGDKALIGTTDIAYEGRPEDVTADQSEIEYLLAAVNRYFKEKLR
                     PQDVLHSFSGVRPLFDDGQGNPSAVTRDYVFDLDQTGGAPLMNIFGGKITTFRELAER
                     GMHKLKDIFPQMGPDWTESAPLPGGEIANADYESFVQLLRELYPWAPRDLLLHYGRLY
                     GARTRDVIGGAFGLDDLGRHFGGQFYEAEARYLVAREWARRPEDILRRRTKHYLHLTE
                     DQQRAFADWFDTADLARAA"
BASE COUNT          247 a          481 c          508 g          276 t
ORIGIN      
        1 ccccgggcca gggccgccag cagcggtccg ggctggatcc gtccgcgtgc gttgaaatcg
       61 gcggtgaagg gccggtggcc gcccttgtcc atcagcgatt gcttgatgtg gatgatcggg
      121 ctgaccttcg gcacggcccg cgcccaggca tagggatcat gatcgcgggg atcggcgctg
      181 gtcacgtcgc catgatcgat atcggccatc atccacatcg ggatcgccat cccggctgcc
      241 gacagccggt cctgcaggac caggcattcc gcgatcgtgt gaccgaattc gcgccccacg
      301 ctcatcggtt cccagaagat gtaatccagt ccggccgccc tgccatgttc ggcgacctcg
      361 gcccagcatt cgatggcgat ccggatcaga tcctcgcggc gcgccggatc gtcatggtcg
      421 cgataggtga ggatcgcgaa ttgcgtgccg atggatttgc cgcccagatc ggcgatgatg
      481 tcggcgaagg tcttgaacca gtccacgtaa tggcgccgca cgtcgcgatc gggatggccg
      541 aaatggttga gccgcccgta tggtccggtc atgccgctgg tgacccggac acccgtgcgc
      601 tgcagtgccg cgcccatcgc ccgcgtcagg cggcggatga cgggcgcggg ccatgaaggg
      661 ttgatgaatt cgtgggtcag ttgcagatcg cggatgcgca gatcgcgcgc cacggtgtcg
      721 atcaggtcat cgggctcggc aaagcggttg accagcggat tggtgttcag cgacagggtc
      781 agcggcatga tccgtcctta cgcggcccga gccaggtcgg cggtgtcgaa ccagtccgcg
      841 aaggcgcgct gctggtcctc ggtcaggtgc aggtaatgct tggtgcggcg gcgcaggatg
      901 tcctcgggcc gccgggccca ttccctggcc accagatagc gtgcctcggc ctcgtagaac
      961 tggccaccga aatgccggcc cagatcgtcg agaccgaagg cgccgccgat cacgtccctt
     1021 gtccgcgcac cgtagaggcg gccgtaatgc agcagcagat cccgcggcgc ccaggggtaa
     1081 agctctcgca gcagctggac gaagctttcg taatcggcgt tggcgatctc gccgcccggc
     1141 aagggtgcgg actcggtcca gtcgggaccc atctgcggaa aaatgtcctt cagcttgtgc
     1201 atcccgcgct ctgccagttc gcggaaggtg gtgatcttgc cgccgaaaat gttcatcagc
     1261 ggcgcgccgc cggtctggtc gaggtcgaag acgtaatcgc gcgtcaccgc agagggattg
     1321 ccctgcccgt catcgaacag cggccgcacg cccgaaaagc tgtgcagcac gtcctgaggt
     1381 cgcagctttt ccttgaaata gcggttcacg gcggccagca ggtattcgat ctcggattgg
     1441 tccgcggtca cgtcctcggg ccggccctca taggcgatgt cggtcgttcc gatcagtgcc
     1501 ttgtcgccct cg
//
LOCUS       DTVW01001210            2150 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2458121, whole
            genome shotgun sequence.
ACCESSION   DTVW01001210 DTVW01000000
VERSION     DTVW01001210.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2150)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2150)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2150
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2458121"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            99..458
                     /locus_tag="EYO87_16085"
                     /pseudo
     CDS             99..458
                     /locus_tag="EYO87_16085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020056749.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter substrate-binding
                     protein"
     gene            646..1464
                     /locus_tag="EYO87_16090"
     CDS             646..1464
                     /locus_tag="EYO87_16090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008552779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HIC67481.1"
                     /translation="MFLVYVIIPIGQSIRISFFDWDGLSPKVWTGLSNYAELWGDPAF
                     YTSLKNNVIWLVLYMLAIPAGLAIALFLNQTVRGIRIYKSLFFFPFVISQVVVGLIFS
                     WFYAPGFGLFFEMTKWFGGEGVAVLANPDTVTYGIIAAGLWPQIAYCMILYLTGLNAV
                     APDQIEAARLDGAKGLKMLWYVVLPQLRPATFIAVVVTVIGALRSFDLVSIMTDGGPF
                     GSSRVLSFYMYEQALSEYGYRMGYGAAIAVVLFAIMMIFISGFIWKMWRDEKGL"
     gene            1466..>2150
                     /locus_tag="EYO87_16095"
     CDS             1466..>2150
                     /locus_tag="EYO87_16095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006724379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HIC67482.1"
                     /translation="MFPRPVQSMSPAARTTYQIALPVMLILWLLPLLGVALTSVRPSS
                     DLAQGNYFGVPSYLAFSNYLDVFRNSPFASYMLNSFRVTIPTVIGAVALSCLTGYALA
                     VYRFRGNLIVFFLFVAGNFVPFQILMVPVRDLTVTMGLYNTITGLALFHIAFQTGFCT
                     LFMRNFIKALPRELIEAARVEGVSEWQIFWHVVLPLVRPAIAALSVLVFTFIWNDYFW
                     ATVLTTGAGT"
BASE COUNT          328 a          688 c          673 g          461 t
ORIGIN      
        1 tgtggatcgt gtcggtcggc gcctcttcgg cacgcgggat gcccggcgtg atctcgggaa
       61 agtccatgaa gcccagcgtc tcgtccgtca tcccgcgtgc cgaagaggcg ccgaccgaca
      121 cgatccacat cccggcaggc gccaagaacg tcgaggatgc caagaaattc ctggcctatg
      181 tggcgcgcgc cgatgtgcag accgcgatga acgaaacgct gggccagttg ccgatcaacg
      241 tcaattcgac cgtgggggac gatccgttcc tgaaacaggg cttcgaggtg ctgtccaccg
      301 ccgagggcgg catcgcccag ttcttcgacc gcgacgcgcc agcgcagatg gccaaggccg
      361 ggatggaggg attccaggaa ttcatggcct atcccgaccg tctggacgcg atcctggaac
      421 ggctcgaatc ggtccgccag cgcgtctaca agaactgatc ttgcgcgtgg cgggcggttc
      481 ccggaaccgg gtgccgcccg cctttccccc cttcctgatc cgaggagtgc gacgatgacc
      541 gtctcgcccg ccgccgcgct gccgccaaat ggcccgcccg cgccgcgccg ccgcaggctg
      601 gggcgcaagc tggcgccctg gctgttcctg gcccccggcg cgatcatgtt cctggtctat
      661 gtcatcatcc cgatcggcca gtcgatccgg atctcgttct tcgactggga cgggctcagc
      721 ccgaaggtct ggacggggct ttccaactat gccgagctgt ggggcgatcc ggccttctac
      781 accagcctca agaacaacgt gatctggctg gtcctgtaca tgctggcgat cccggccggc
      841 ctggccattg cgctgtttct gaaccagacc gtgcgcggca tccgcatcta caaatcgctg
      901 ttcttctttc ccttcgtgat ttcgcaggtc gtggtcggcc tgatcttctc gtggttctac
      961 gcgcccggtt tcgggctgtt cttcgagatg acgaaatggt tcggcggcga gggcgtggcg
     1021 gtgcttgcca accccgatac cgtgacctac ggcatcatcg ccgcaggtct ttggccgcag
     1081 atcgcctatt gcatgatcct gtatctgacc ggcctgaacg cggtcgcccc cgaccagatc
     1141 gaggccgccc ggctggacgg cgccaagggg ctgaagatgc tgtggtacgt ggtgctgccg
     1201 cagcttcggc cagcgacctt catcgccgtc gtggtgaccg tcatcggcgc cctgcgcagc
     1261 ttcgatctgg tgtcgatcat gactgatggc ggaccgttcg gatcgtcgcg ggtgctgtcc
     1321 ttctacatgt atgaacaggc gctgtcggaa tacggctatc gcatgggata cggcgcggcc
     1381 atcgcggtgg tcctgttcgc gatcatgatg atcttcatct cgggcttcat ctggaagatg
     1441 tggcgcgacg aaaaggggct ttgagatgtt tcccagaccc gtccagtcca tgagcccggc
     1501 cgcgcggacc acctaccaga tcgcactgcc ggtgatgctg atcctgtggc ttctgccgct
     1561 gctgggcgtg gccctgacct cggtccgtcc ctcaagcgat ctggcgcagg gcaattattt
     1621 cggggtgccg tcctacctgg cgttttcgaa ctatctcgac gtgttccgca attcgccctt
     1681 cgccagctac atgctgaatt ctttccgggt gacgatcccg acggtgatcg gggcggtggc
     1741 gctgtcctgc ctgaccggct atgcgctggc ggtctacagg ttcaggggca acctgatcgt
     1801 cttcttcctc ttcgtggcgg gcaatttcgt gcccttccag atcctgatgg ttccggtgcg
     1861 cgacctgacg gtgacgatgg gattatacaa taccattacc gggctggcgc tgttccacat
     1921 tgccttccag accgggttct gcacgctgtt catgcgcaat ttcatcaagg cgctgccgcg
     1981 cgaactgatc gaggccgccc gcgtcgaggg cgtcagcgaa tggcagatct tctggcatgt
     2041 cgtgctgccg ctggtgcggc ccgccatcgc ggccctgtcg gtgctggtct tcaccttcat
     2101 ctggaacgat tatttctggg caacggtgct gacgaccggg gccggcaccg
//
LOCUS       DTVW01001211            2089 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_2460955, whole
            genome shotgun sequence.
ACCESSION   DTVW01001211 DTVW01000000
VERSION     DTVW01001211.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2089)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2089)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2089
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_2460955"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            1..993
                     /locus_tag="EYO87_16100"
                     /pseudo
     CDS             1..993
                     /locus_tag="EYO87_16100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009506870.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="integrase"
     gene            complement(1095..1877)
                     /locus_tag="EYO87_16105"
     CDS             complement(1095..1877)
                     /locus_tag="EYO87_16105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014330258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HIC67483.1"
                     /translation="MLIHPTLGQMATLGLTGMADAWKALAEQDPGQALERNEWLGLML
                     DREAATRADKRFANRLRNAKMRFPNACIEDVDFAVSRGLDRRQILALAQGDWIKAREQ
                     IILTGQTGTGKTWLACAFAHQAARFDHTVSYVRMPRLFEDMAMARLDGRFPRLVDKLA
                     RVQLLVLDDWGTHGLTDQQRLDLLELFEERYQRRSTIITAQLPVSGWHDMIGEPTIAD
                     AILDRIVHNAHRIELKGDSMRRKDRNATLTSAENTEIIRTET"
BASE COUNT          334 a          636 c          712 g          407 t
ORIGIN      
        1 gcgcgccgcg accggctttt cgttgcggaa cagggattgc cgcatgcgga gcgccgccgc
       61 cggcaacggc agcgactggc gcgctatttc cggtcccgcg cgcggcaggg tcggggcgtg
      121 ccggtctggg caagcccgcc caacggttcc gcatccgtcg atccggtaag cggggagctt
      181 ctgcccgtcg tcaacgtgca gcttctgcat cttcacgtag gggtcgatgc cgccagggag
      241 ccggcgatgc atctcgctct cgccggcggc gcgtccgatc tcatcgctgc cgccatcgcg
      301 gatatcggga tcgaacccgg cggcatggat acgccgatct cggtcgatgc cgatctcggc
      361 cggccatggc ggctccgctt cgatgccaaa tccctcgtcc tggaagagcg catgctgcag
      421 gcagcggctt atgtggtctg cgcctatctg accggtatgc gcgattgtga ggtgcaggcg
      481 atgcgccggg gatgcctgac gcttgcgcgc agcgaggacg gcaccgtgtc acgacaccgc
      541 gtccgttcca ccgcctacaa gggaaagggg gcccggggag cgccggcaga gtgggtgacc
      601 atcgagcccg tcgccgatgc gatcggggtg ctcgaacagt tgacccggcg cgcggctgtt
      661 gcccatggtc tcgatacgct ctggcctgtg ctgtcagtga cgcgaagtag caaaccgcac
      721 gtctccgccg agatcgtgcg ccagatcaac gcctatcgtg accacctgaa caggctgttc
      781 gggacggaag aggcgcccgc cataccgccc gggccggacg gcaagccctg gcggatcacg
      841 acccgccagt ttcgtcgcac gatcgcatgg cacatcgcaa accgtccttt cggaacggtg
      901 gccggcatga tccagtacaa gcatgcatcc gtcgccgcgt tcgaaggcta cgcgggtagc
      961 agcgcctcgg gtttccgcgc cgaggtcgag gcgctgcgga tttcagaaat accggacagc
     1021 aattacgcta atttccggac agccgtttca gtaattcccg gacagctcgg gcacggctga
     1081 tcatctgcct gcgatcatgt ttcggttcgg atgatttcgg tgttttcggc ggaggtcaag
     1141 gtcgcgttcc gatcctttct gcgcatgctg tctcccttga gttcgatgcg gtgtgcgttg
     1201 tggacgatcc ggtcgaggat ggcgtcggcg atggtgggtt cgccgatcat gtcatgccat
     1261 ccggacacgg gcagctgggc ggtgattatg gtggaccgac gctgatagcg ctcctcgaag
     1321 agctcgagca gatcgaggcg ctgttggtcg gtcaggccat gcgtgcccca atcatccagc
     1381 accagcagct gcacgcgtgc cagcttgtcg acgagacggg gaaagcgtcc atcgaggcgt
     1441 gccatggcca tgtcttcgaa cagccgcggc atgcggacat aggacacggt gtgatcgaaa
     1501 cgcgccgcct gatgggcgaa ggcgcaggcg agccatgtct tgccggtgcc ggtctgtccg
     1561 gtgaggatga tctgttccct ggccttgatc cagtcgcctt gtgcgagcgc aaggatctga
     1621 cggcggtcga gtccgcggct gactgcgaaa tccacgtctt cgatgcaggc gttggggaag
     1681 cgcatttttg cgttgcggag cctgttggca aagcgcttgt cagcgcgggt tgcggcttcc
     1741 cggtcgagca tgaggccaag ccattcattg cgctcaagtg cctggccggg atcctgttcg
     1801 gccaaggcct tccaggcgtc tgccatgcct gtaaggccaa gcgtggccat ctggcccagg
     1861 gtgggatgta tcagcatctg tttgtccttt ccggggttac tggtagtagc cggggccacg
     1921 aatattgtcg tggaccggcg tgggggtgac cgggtccggc ggcttgggcg ctccatccag
     1981 accggtgatc aggatggagc gcaccgaggt atagttgacg gtgccgatcg tcagggcgcg
     2041 ttcgcaggcc gcttccagcc tgtccgcccc gaattgtcgc tgcaggcca
//
LOCUS       DTVW01001212            7802 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_246850, whole
            genome shotgun sequence.
ACCESSION   DTVW01001212 DTVW01000000
VERSION     DTVW01001212.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 7802)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7802)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7802
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_246850"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..565
                     /locus_tag="EYO87_16110"
     CDS             <1..565
                     /locus_tag="EYO87_16110"
                     /inference="COORDINATES: protein motif:HMM:PF03466.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HIC67484.1"
                     /translation="GGEMSLWQPLLLDWIRRLRAECPDIALRVQVDAPGTLIDQVAAG
                     LVEAVVIHAPPQRPGLRIDLLADDRLVLASTDPAADPANGQTLVGADWGPDFSQGFVS
                     GFPAFQGAGVTFDPGPLAADYILAAGGSGYFRQRDIAPHLASGALHLVPDAPQFPYPV
                     CAVSSSQADPDLLGPALSHLRKVAPSG"
     gene            611..1531
                     /locus_tag="EYO87_16115"
     CDS             611..1531
                     /locus_tag="EYO87_16115"
                     /inference="COORDINATES: protein motif:HMM:PF06411.9"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67485.1"
                     /translation="MAPQAGNGSRPRPCFLAEMISRAVAASSLSAAFRLTKASGTAAL
                     GAGFPRWLKFSRRRKSIMPMKIRIAATTAICALSANMALAQSESASKQTTGKEQSPDS
                     VTCADITAMDTALVPGTLYYIAGYKKGSDAGMSAGQGGGQSAAAGASGATGSASGDSS
                     ATTAADGSTVTSDANTSANSAMDKPASDAATAADGSAITSDANTSANSGSSGAASDTT
                     MATDSSATAAGADASASASGGGQSGGGMSADAGGSQAGSAGGDVAIMRVSGMFEIPVE
                     EVITACTDTPEMKAADAIEQKRGSAGSMSN"
     gene            1981..2406
                     /locus_tag="EYO87_16120"
                     /pseudo
     CDS             1981..2406
                     /locus_tag="EYO87_16120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005852018.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            2511..2909
                     /locus_tag="EYO87_16125"
     CDS             2511..2909
                     /locus_tag="EYO87_16125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005852019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage holin family protein"
                     /protein_id="HIC67486.1"
                     /translation="MSTEPNKSASGLLNDALSHVSSLVRNEVDLARAEINENVNNAGA
                     AIGLIIGALVVALTALNVLSAALVAALTEAGIPGGWSALIVGVVFAIIAYVMLKKGKD
                     NLKLSSLAPSRTAKNVKRDARAVKEAYDDQ"
     gene            2899..4092
                     /locus_tag="EYO87_16130"
     CDS             2899..4092
                     /locus_tag="EYO87_16130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007120127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3618 domain-containing protein"
                     /protein_id="HIC67487.1"
                     /translation="MTNETRSPKEIERDIERERAGLTNTLSDLQDRFSIESLARQVSD
                     QVREHGGDIGRSVSDAVKRNPLALALTGAGLAWLMLSDRSGGHDHAARDARHGRFDDD
                     DKDGRYGRRHGHDARSGVADDHRSRPVTGTGRFARPENTPSWARDHDSDGLGLSSRAE
                     YTAPDAAGNASEAASGAGGSGRGPGASVADTTRRAAGSVTDTLKGAADGVADTGRAVA
                     DSARAAATSASDRAAAMRARLAEGTEALSEEARDRVIAARESAIEARDASLRYARQGR
                     DMAVDIFEEQPLIAGALALAVGAAIGAALPRSRTEDRYLGEQSDRLMEEAERLYAEEK
                     EKLGKVAEAATDEARKIAQETRDEVDSAAKSAIDKAKSSGERIAGAAETEAEKQNLGD
                     VQNRS"
     gene            4163..5113
                     /locus_tag="EYO87_16135"
     CDS             4163..5113
                     /locus_tag="EYO87_16135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007120128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihY/virulence factor BrkB family protein"
                     /protein_id="HIC67488.1"
                     /translation="MTRGRNADTPAEIPAAGWKDIALRVKDELVSDHVGLLAAGVAFY
                     ALLAIFPAITALMALAGMVLDPAQVTAQLATLTQMIPRQAAQIILDQAVAVAGSQDAG
                     LGIAFLIGLLLAIYSASKGMSSLMEGLNVAYDEDEDRGFIRKTLWTLGLTVFLIVGLL
                     LGLLAALAVPVALDLVALPGWLKTVLALSRWILLAIMTIIGLAVLYRYGPSRDDAEWR
                     WLTPGAIAACVIWILASIAFSLYVGNFGSYNQTFGSMAGVIILLMWLWISAFIVLLGA
                     ELNAEIEAQTAADSTVGPDEPMGARDAEKADHLGSAKGRT"
     gene            complement(5279..6400)
                     /locus_tag="EYO87_16140"
     CDS             complement(5279..6400)
                     /locus_tag="EYO87_16140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008229308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PHB depolymerase family esterase"
                     /protein_id="HIC67489.1"
                     /translation="MTDDASSAMRRASDLVRAGNPIAATEMIQAALRGTAASAMSRPG
                     PVPETLRAAEDVAPFGKGRGLRKTLAELAARARPGGGVGGAPAPEPVLPRGARFDHGS
                     FTCPAGERAYRLYIPDLRARRPAGLVMMLHGCTQSPADFANGTGMNRIADAHDLIVVY
                     PGQSRGANMQSCWNWFAPSDQERGSGEPAILAGLAVQIRQDHDIPEDRIFVAGLSAGG
                     AMAVILGRAYPDVFTHVGVHSGLPYKAARDVQSAFAAMGGSLRQTSGAPLRPLPTIVF
                     HGAADATVNAANGQRIVDEAGAAGAELRDSGTMGGRRYIRDTVLAPNGQPILEHWRID
                     GLGHAWSGGDATGSYADPAGPDASAEMVRFFLDATGTVS"
     gene            complement(6424..6840)
                     /locus_tag="EYO87_16145"
     CDS             complement(6424..6840)
                     /locus_tag="EYO87_16145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009504060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CopG family transcriptional regulator"
                     /protein_id="HIC67490.1"
                     /translation="MGNVTQIGQRMPENEKITINMGFVDLGRIDLLVQEGFYSNRSDF
                     IRTAIRKQLDTHGDAVARSIERHTMELGLRDYSAADLKAARDAHEILHIKVVGLVRIA
                     SDVTPELALATIGSIDVLGAFQASPEVKKALGSRIR"
     gene            7103..>7802
                     /locus_tag="EYO87_16150"
     CDS             7103..>7802
                     /locus_tag="EYO87_16150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009814471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase/fumarate reductase
                     iron-sulfur subunit"
                     /protein_id="HIC67491.1"
                     /translation="MKVSVWRGDHEGGEFQIFDVPAQDSQTVLDVVAWIQQNDDPTLS
                     YRFACRVGMCGSCAMMVNGQPRWTCRTHVKKVLKDNCIEIGPLRNLPVIKDLAADMDP
                     FFEKWVKAEGVFHPSKTRNDQIEEIDPASVQRVKADAGIECINCSVCYASCDTVAGNP
                     DFLGPAALNRAWTLYNDSRDAGSRKILDAVSGAGGCHNCHSMGSCAHFCPNGLNPMDA
                     IAGLKRATAAAFFRR"
BASE COUNT         1401 a         2492 c         2596 g         1313 t
ORIGIN      
        1 cggcggcgag atgagcctct ggcagccgct gctgctggac tggatccggc ggctcagggc
       61 cgaatgcccc gacatcgcgc tcagggtcca ggtcgatgcg cccggaacgc tgatcgacca
      121 ggtggccgcg ggtcttgtcg aagcggtggt gatccatgcg ccgccgcaac ggcccggcct
      181 gcgcatcgat ctgctggcgg atgacaggct ggttctggcc agcaccgacc cggccgccga
      241 ccccgccaac gggcagaccc tggtgggcgc cgattggggc ccggattttt cgcagggctt
      301 cgtttccggc tttcccgcgt ttcagggcgc cggcgtgacg ttcgatcccg gcccgcttgc
      361 cgccgattat attttggcgg ccgggggctc gggctatttc cgccagcgcg acatcgcgcc
      421 ccatctcgcc tcgggcgcac tgcaccttgt cccggacgcg ccgcaattcc cctatccggt
      481 ttgcgcggtc agttcgtcgc aggccgaccc cgacctgctg ggccctgccc tgtcccatct
      541 ccggaaggtc gcgccctctg gttgatccct tgcccgcagt ccacgatgtg ggttcaacgc
      601 cgggccggac atggcgccgc aggctggcaa cggatcacgt ccgcgccctt gtttcctggc
      661 cgaaatgatt tcgcgggcgg tcgctgccag cagcctctcc gccgcgttcc gattaacaaa
      721 agcttcagga accgccgcct tgggcgccgg gtttccccga tggttgaaat tcagccggag
      781 gaggaaatca atcatgccaa tgaaaatcag gatcgcagcg accaccgcca tctgcgcctt
      841 gtcggcgaat atggcactgg ctcagtccga atctgcgagc aaacagacca cgggcaaaga
      901 acaaagcccg gattccgtga cctgcgcgga cattactgcc atggacacgg cgctggttcc
      961 gggcaccctg tattatatcg ccgggtacaa gaaaggcagc gatgcaggaa tgtcggccgg
     1021 tcaaggcggc ggccagtcgg ctgcggcggg ggcgtcaggc gcgacagggt ccgcatccgg
     1081 cgacagttct gcgacgactg cggccgatgg cagcaccgtg acaagcgatg ccaacacctc
     1141 tgccaacagc gccatggaca agccggcatc ggatgccgcg accgcggccg atggcagcgc
     1201 gatcacgagc gatgcgaaca cctctgccaa cagcggctcc agcggggcgg cgtcggacac
     1261 gacgatggcc actgacagca gcgcgaccgc ggcaggtgcg gatgcctcgg catcggcgtc
     1321 tggtggcgga caatcgggcg gcggaatgtc cgccgatgcc ggcggcagcc aggctggcag
     1381 cgccggtggc gacgtcgcca tcatgcgcgt cagcggaatg ttcgagatcc cggtcgagga
     1441 ggtcattacg gcgtgcaccg acaccccgga aatgaaggcc gccgacgcga tcgaacagaa
     1501 gcgcggctct gcgggttcga tgtcgaactg acgacgacca ggctcagacg ccagacaagg
     1561 gttcggcggc gtggaagcgt tcatgccgcc ggaccaacgg gcgatcccgg ttttcccgcg
     1621 aaagccctgt tgcgaatttc atgagtgttc gggctgcacc tctgtggatt tctggccggc
     1681 acacccggcc cctcggaacg actatccctg actgccgcgg gcggaaacgt cgccacgtgg
     1741 tcatggatcg gcatgtgatc gggggattcg cgcgaaacgc cggcacagag ggcggcccgc
     1801 aagttcgatg aagcccggca aggatgtcat gggtgcgacc cgtacttgtc gcaccgcagc
     1861 acgggcgggc tgaccgcgcg gcgcgggcaa ggtggcctgg accgtgaccg cctcgctgat
     1921 ccgtggccgt cccattctcg cggtctgcaa gcggatcgcg caacttgaaa ggatttagct
     1981 gtgacgaata ctgaccaaca gaagccgact gcgcaccagg acacgacgag cagggccaag
     2041 tcggctgcga gctcggcgtc ggaagaggtg aaggagcggg cgcaggatgt ggccgggaag
     2101 gtttcccacg aagcgacacg gcaggccgac aaggccaagg gcgcgttggc gggcgaggtg
     2161 aaggatgtcg cctccgcgct gcggaccgcg gccgatgaga tgcgtgacgg atcgcctcag
     2221 gaacgcacct tcagccagat cgcggacggg ctggccgatg cctcggaagc catgcgaaac
     2281 aaggatttgg gcgaggtcgt cggaaccctc aacgactttg cgcggcgcaa tccgttggct
     2341 ttcctggggg gcgcggcact ccttgggttt gcagcgaccc ggttcgccaa ggcgtcaggc
     2401 agcaggccat cacagcccgc caacccctcg ttggctggca tgtccggccc cgcagccgcc
     2461 gatccgctgc aaagcccggc ccccgtcacg acagcgaaag gaacaccagc atgagcaccg
     2521 aaccgaacaa gtccgccagc ggcttgctga acgacgcatt gtcccatgtc agcagcctgg
     2581 ttcgcaacga ggtcgatctg gcccgtgcgg aaatcaacga aaacgtcaac aatgccggcg
     2641 ccgccatcgg cttgatcatc ggcgccctcg tggtggcgct gaccgctctc aacgtgttgt
     2701 ctgccgccct tgtcgccgcc ctgaccgagg ccgggatccc cggcggctgg tcggcgctga
     2761 tcgtcggggt cgtcttcgcg atcatcgcct acgtgatgct caagaagggc aaggacaacc
     2821 tgaaactcag cagtctcgcc cccagcagga ccgcgaagaa cgtcaagcgc gacgcgcgcg
     2881 ccgtgaagga ggcctatgat gaccaatgag acccgttccc ccaaagagat cgaacgcgat
     2941 atcgaacgcg aacgcgccgg tctgaccaat acgctgtcgg acctgcaaga caggttttcg
     3001 atcgaaagcc tcgcgcggca ggtaagtgat caggtccgcg agcatggcgg cgatatcggc
     3061 cgttccgtat cggacgcggt gaagcgcaat ccgctggcat tggcgctgac cggggccggc
     3121 ctcgcctggc tcatgctgag cgacagaagc ggcgggcacg accatgccgc ccgcgatgcg
     3181 cgccatggcc ggttcgatga tgacgacaag gacggccggt atggccgccg gcacggtcac
     3241 gatgcgcgta gcggtgtcgc ggatgatcac aggtcccggc ccgtgaccgg gacgggacgt
     3301 ttcgcgcggc ccgaaaacac cccctcctgg gcgcgagacc atgacagtga cggacttggc
     3361 ctgtcatcgc gggcagaata caccgccccg gacgccgccg ggaatgcctc ggaggcggcg
     3421 tccggggccg ggggatcggg gcgcggccct ggcgcctctg tcgcggatac caccagacgc
     3481 gcggccggat cggtcacgga tacgctcaag ggtgccgccg atggggtggc ggataccggc
     3541 cgcgcggttg ccgacagcgc gcgcgctgcg gcgaccagcg catcggatcg cgcggcagcc
     3601 atgcgggcgc ggctggccga gggcaccgag gccctgtccg aggaagcacg cgatcgcgtg
     3661 atcgccgcgc gtgaaagcgc gatcgaggca cgcgatgcgt cgctgcgata tgcccgtcaa
     3721 ggccgcgaca tggccgtcga tatcttcgag gaacagccgc tcatcgcggg tgcgcttgcc
     3781 cttgccgtcg gcgccgccat cggtgcggca ctgccgcgca gccggaccga ggaccgttat
     3841 ctgggcgaac agagcgatcg attgatggaa gaggccgaac gtctttacgc cgaggagaaa
     3901 gagaaactcg gcaaggtcgc tgaggccgcg accgacgaag ccagaaagat cgcgcaagaa
     3961 acccgggacg aggtggacag cgcggcgaaa tcggcgatcg acaaggccaa gtcctcgggc
     4021 gagcggatcg cgggcgcagc cgaaaccgag gccgagaagc agaacctggg cgatgtccag
     4081 aacaggtcgt gatcgaaaaa cgccatgaaa cctgccggtc cgcgcatccc gtgcgggccg
     4141 gattcagcaa aagaggcatc gcatgacccg tggcagaaac gccgacaccc cggcggagat
     4201 tcccgcggca ggatggaagg acatcgccct tcgcgtgaag gacgaactgg tctcggatca
     4261 cgttggcctc cttgccgcgg gcgtcgcatt ctacgccttg ctggcgatct ttccggctat
     4321 cacggcgctg atggcgctgg cgggcatggt gcttgaccct gcccaggtga ccgcgcagct
     4381 tgcgacgctg acccagatga tccccaggca ggccgcgcag atcatcctcg atcaggcggt
     4441 cgccgtcgcg ggatcgcagg atgcgggcct ggggatcgcg ttcctgatcg gcctgttgct
     4501 tgcgatctat tccgcgtcca agggaatgag cagcctgatg gaagggctga acgtcgccta
     4561 tgatgaagac gaggatcgcg gattcatccg caagaccctg tggacccttg gcctgacggt
     4621 gtttctgatc gtcggcctgc tgctggggct tctcgcggcg ctggcggtgc cggtcgcgct
     4681 ggatcttgtc gccctgccgg gctggctgaa aacggtgctg gccttgtcgc gctggatcct
     4741 gcttgcgatc atgacgataa tcgggcttgc ggttctttac cgatatggtc cgtcgcgcga
     4801 tgacgcggaa tggcgatggc tgacgcccgg cgcgatcgcg gcctgcgtga tctggatcct
     4861 cgcatcgatc gccttctctc tctacgtcgg caatttcggc agctacaacc agaccttcgg
     4921 cagcatggcg ggcgtcatca tcctgctgat gtggttgtgg atttcggcct tcatcgtcct
     4981 gctcggagcc gagttgaacg ccgagatcga ggcccagacc gccgccgact cgaccgtcgg
     5041 cccggacgaa ccgatgggtg cgcgcgatgc ggaaaaggcc gatcatcttg gttccgcgaa
     5101 aggccggacc tgacccgacg tcgccgcggc cgggacgatg cgcacaggcc ggccggagac
     5161 cccggcaggc tgcgtcgcgt ggcctggggc ggcagtttcc gaccttgccg ccatccggcc
     5221 ccttgtcgga ccgaaggtgg ttttggccgc gacggagcat gtcgggaagg aggtcatgtc
     5281 atgaaaccgt cccggtcgcg tcaagaaaga accgcaccat ttccgcgctt gcgtcggggc
     5341 cggccggatc ggcataggag ccggtcgcat cgccgcccga ccaggcgtgg cccagcccgt
     5401 cgatgcgcca atgttcaagg atcggctgac cgttcggggc cagcacagta tcacggatat
     5461 agcggcgacc gcccatcgtg ccgctatcgc gcagctcggc cccggcggcg cccgcctcgt
     5521 ccacgatccg ctgtccgttg gccgcgttga cggtggcgtc cgccgcaccg tgaaacacga
     5581 tcgtcggcag cgggcggagg ggtgcgccag aagtctggcg caagctgccg cccatcgccg
     5641 cgaaggcgga ttgcacgtcg cgggccgcct tgtagggcag accggaatgc acccccacat
     5701 gagtgaacac atccgggtag gcccgtccga ggatcaccgc catcgcaccg ccggccgaca
     5761 atccggcaac gaaaatcctg tcctcgggga tgtcgtgatc ctgacggatc tgaaccgcca
     5821 gaccggcgag gatcgcgggt tctccgcttc cgcgttcctg atcggacggc gcgaaccagt
     5881 tccagcacga ttgcatgttc gccccacgcg actggccggg atagaccacg atcaggtcat
     5941 gggcatcggc gatccggttc atcccggtgc cattcgcgaa atccgcaggc gattgggtgc
     6001 aaccgtgcag catcatcacc agaccggcag ggcgccgcgc tcgcaggtcg ggaatgtaga
     6061 gacggtatgc ccgctctccc gccgggcagg tgaaactgcc atggtcgaag cgggcacccc
     6121 tgggcagcac cggctcgggt gcgggcgcac cgcccacccc gccgcccggc cgtgctcggg
     6181 cggccagttc ggccagggtc ttgcgcaaac cccggccctt gccgaagggc gcgacatctt
     6241 ctgccgcgcg cagcgtttcc ggaaccggcc ccggtcgcga catggcggac gcggccgtgc
     6301 cgcgcaaggc ggcctggatc atttccgtgg cagcgatcgg gtttccggcg cgcacaaggt
     6361 cactggcccg gcgcatcgcc gagcttgcat cgtctgtcat ctctgttttt ccttgattgg
     6421 gggtcagcgg atacgcgacc caagtgcctt cttgacctca gggctggcct gaaaggcccc
     6481 cagcacgtcg atggacccga tcgtcgcgag ggcgagttcc ggcgtcacgt cggatgcgat
     6541 ccgcacgagg ccgacgacct tgatatgcag tatttcatgc gcatcgcgcg cggccttcag
     6601 atcggctgcg ctgtagtcgc gcaggccaag ctccatcgta tgccgttcga tcgatctggc
     6661 caccgcgtcg ccatgcgtgt ccaactgctt gcggatcgcc gtgcgaatga agtcgctgcg
     6721 attggaatag aatccttcct gcacgagcag gtcgatcctg ccgagatcca cgaatcccat
     6781 attgatggtg atcttctcgt tctcgggcat cctttggccg atctgcgtga cgttgcccat
     6841 cttccattct ccatctgtat ggatggtata tggatgtatt caaggaaagc gcaaggggct
     6901 tgttccggat attcggcgca ggccaccggc gatcgggtga tgcgacagag gtgccccgcc
     6961 cgaatatgtc agctaaacta acacgattgt atagtaattg tcgctttttg taactttcat
     7021 ttaaacgtat gcatcgttgg aaagagatga acatcacgca agcagacaag gatccggcac
     7081 cgtgtcttcg accgataccc gtatgaaggt ttccgtttgg cgcggcgacc atgaaggtgg
     7141 cgaattccag atctttgacg ttcccgcgca agacagccag accgtgctgg atgtcgtggc
     7201 gtggatccag cagaacgacg atcccacgct gtcataccgt tttgcatgtc gcgtcggaat
     7261 gtgcggatcc tgcgcgatga tggtgaacgg ccagccgcgc tggacctgtc gcacgcatgt
     7321 caagaaggtg ctgaaggaca attgcatcga gatcgggccg ctgcgcaatc tgccggtcat
     7381 caaggatctc gcggccgaca tggacccgtt tttcgagaaa tgggtcaagg cggaaggcgt
     7441 gttccacccg tcgaagaccc gcaacgacca gatcgaggag atcgacccgg cgagcgttca
     7501 gcgggtaaag gccgatgccg ggatcgaatg catcaactgc tcggtctgct atgcgtcatg
     7561 cgataccgtg gccgggaatc ccgatttcct cggtcccgcg gcgctgaatc gtgcctggac
     7621 gctctacaac gattccaggg atgcgggttc gcgcaaaatc cttgatgcgg tcagcggcgc
     7681 cggtggctgc cacaactgtc actcgatggg aagttgcgcg catttctgcc ccaacggact
     7741 gaatccgatg gacgcgatcg ccgggctgaa gcgggcgacc gccgccgcgt tcttcaggcg
     7801 ga
//
LOCUS       DTVW01001213            5724 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_248173, whole
            genome shotgun sequence.
ACCESSION   DTVW01001213 DTVW01000000
VERSION     DTVW01001213.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 5724)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5724)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5724
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_248173"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..474)
                     /locus_tag="EYO87_16155"
     CDS             complement(<1..474)
                     /locus_tag="EYO87_16155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010398284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug ABC transporter permease"
                     /protein_id="HIC67492.1"
                     /translation="MGVRRFGRVNWLGFRTLATREVMRFMAVWQQTIFAPLMTAALFV
                     LVFALALGRGRSEIMGLPYLEFLGPGILMMTVIQNAFANTSSSITSAKVQGNIVDTLM
                     PPLSAGEMLAGYLAGSVVRAGLVALVIGTGMVIVTGAGIAHPAWAATFVLLAALLL"
     gene            625..1209
                     /locus_tag="EYO87_16160"
     CDS             625..1209
                     /locus_tag="EYO87_16160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GcrA cell cycle regulator"
                     /protein_id="HIC67493.1"
                     /translation="MSWTDDRVETLKRMWGEGQSASAIAKELGGVTRNAVIGKVHRLG
                     LSNRIDEAEPAPATAEPDRKAEKKPAAPRPEPVPEPAEARAEPADEPSTQPAYTPQPR
                     RTIVPAGQPLPPQPSANEISPEALASVREVEKKARRLTLMELTERTCKWPIGDPATEK
                     FWFCGLPAQAGKPYCEAHVGVAFQPMSSRRDRRR"
     gene            complement(1407..2447)
                     /locus_tag="EYO87_16165"
     CDS             complement(1407..2447)
                     /locus_tag="EYO87_16165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005851856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel family protein"
                     /protein_id="HIC67494.1"
                     /translation="MDQLGAIGTNFGGLVEKLQSWINGFISLIPNLIAASVLFLVAWL
                     VSVLVTWSIRKTLVRHDRPALANVGGSLVGWAIIVLGFLLAMTVVLPSLKPGDMLAGL
                     GIGSVAIGFAFKDILQNMLSGILILLQRPFKVGDQIEAGGHEGTVEDIQTRATMIRTY
                     DNRRVVIPNSQVYTNSVVVNTAYDKRRSDYDVGIGYADDWDRARAVILEAVSVVEGVA
                     DEPAAEALPWGIDESQLTMRVRWWTDPVRTNVVHTQARVIQAISTALDEAAIDMPYPT
                     NVVLLHDQTEETDGTRGAQREGWPAGDKPPQSRQKVEMKARARRDRAMAPPRSGHEDG
                     DSGAAPEDGDAI"
     gene            2616..2960
                     /locus_tag="EYO87_16170"
     CDS             2616..2960
                     /locus_tag="EYO87_16170"
                     /inference="COORDINATES: protein motif:HMM:PF09864.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67495.1"
                     /translation="MPRPALFLLLVLAAPAQAAPALSLPLGEDAEVVPARYICDDGGT
                     IAVQYVNAGPNRLALLRLDGEERLFVNVISASGARYVAGEYEWWIKGDQASLRNAMRD
                     GDARSCRTRDGA"
     gene            complement(2957..3919)
                     /gene="nudC"
                     /locus_tag="EYO87_16175"
     CDS             complement(2957..3919)
                     /gene="nudC"
                     /locus_tag="EYO87_16175"
                     /EC_number="3.6.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008027168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) diphosphatase"
                     /protein_id="HIC67496.1"
                     /translation="MIPESEVTFAGSFLDRADRLRGDGAGIARMLSRTDTLVLPFWRG
                     KPLFDLTPTGPRLAWLPASDDLVADCPEPLVFMGLDMAGTAHFAADVSYLAPPDHPPA
                     EFIDRHTLDLSQTRKFIDLRAIMAEIDHRDAGIAAAAKGIFEWRLTHGFCARCGARNR
                     VSHAGWRFECPACGRQHFPRTDPVVIMLVLDGDRVLLGRQSLWPERMYSLLAGFVEPG
                     ETVEEAVRREVMEEAGITVGAVRYVTSQPWPFPASLMIGCVARAESRAITLDPTELED
                     AIWVPRNQIAEALEGRHDRIAPARKGAVAQVILRAWVQGQIEPI"
     gene            4362..>5724
                     /locus_tag="EYO87_16180"
     CDS             4362..>5724
                     /locus_tag="EYO87_16180"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HIC67497.1"
                     /translation="MARHLITSALPYINGIKHLGNLVGSQLPADLYARYLRARGHEVM
                     FICATDEHGTPAELAAAKTGEPVARYCARMHRIQADLARGFGLSFDHYGRSSSDRNRR
                     LTQHFAGKLADNGYIREVAEKQVYSIDDGRFLPDRYIEGTCPNCGYDKARGDQCENCT
                     KQLDPTDLIEPRSAISGSTNLEVRETKHLYLRQSALKGEIAEWIDSKKDWPILTTSIA
                     RKWLNDGDGLQDRGITRDLSWGVPVKRGDQDWPGMEGKVFYVWFDAPIEYIAATAEWA
                     DANDRTEAEWRAWWRTDEGADDVTYTQFMGKDNVPFHTLSFPVTQIGAGEPWKMVDYI
                     KSFNYLTYDGGQFSTSQGRGVFMDHALDILPADYWRWWLLSHAPESGDSEFTWENFQQ
                     SVNKDLADVLGNFVSRVTKFCRAKFGEAVPGGGSFGQPEQNLIAALTTRLRAYEDAMS
                     RMEV"
BASE COUNT         1030 a         2003 c         1817 g          874 t
ORIGIN      
        1 cagcagcagc gccgccagca ggacgaaggt cgcggcccag gccggatggg cgatcccggc
       61 accggtgacg atcaccatcc cggtgccgat gaccagcgcc accagccccg cccgcacgac
      121 cgaaccggcc agatagcccg ccagcatctc gcccgccgac aagggcggca tcagcgtatc
      181 gacgatattt ccctgcacct tggccgaggt gatcgaggac gaggtattgg cgaaggcatt
      241 ctggatcacc gtcatcatca ggatgccggg gcccagaaat tccagatagg gcagccccat
      301 gatctcgctc cggccgcggc ccagggccag cgcgaagacc aggacgaaca gcgccgccgt
      361 catcagcggc gcaaagatcg tctgctgcca gaccgccatg aatcgcatca cttcgcgggt
      421 cgccagagtg cgaaaaccca gccagttgac acgcccgaaa cggcgcacgc ccatggcggg
      481 ccgggtggtc atcatgtcct tgggcatcgc gcggtccttg aattccggtc tgccggggtc
      541 taaatctcgg catcccgttt gtgacgggac caaccggatg tttcaagatg gggtggcggg
      601 ccggacccgc ccggaaaggc agtcatgtcc tggaccgatg atcgtgtcga gacgctcaag
      661 cgcatgtggg gcgagggcca gtcggccagc gccatcgcca aggaactggg cggcgtcacg
      721 cgcaacgcgg tgatcggcaa ggtccatcgc ctcgggctgt cgaaccgcat cgacgaggcc
      781 gagcccgccc cggccaccgc cgagcccgac aggaaggccg agaaaaagcc cgccgcgccc
      841 cggcccgaac cggtgccgga acccgcagag gcaagggccg aaccggccga tgaaccctcg
      901 acccagcccg cctatacgcc gcagccgcgc cgcaccatcg tgccggccgg ccagcccctg
      961 ccgccgcagc cctcggccaa cgagatcagc cccgaggcgc tggcctcggt ccgcgaggtc
     1021 gaaaagaagg cccgcaggct gaccctgatg gaattgaccg agcggacctg caaatggccg
     1081 atcggcgatc ccgcgaccga gaaattctgg ttctgcggcc tgcccgccca ggccggcaaa
     1141 ccctattgcg aggcgcatgt cggcgttgcc ttccagccga tgagctcgcg ccgggatcgg
     1201 cgtcgctgaa gccaggccgg cccggataat cccgttccgg ctgggtgact tgatcggccc
     1261 ttccccgatc gacgggcttt cccagaaacg ccgatccacg gcaaggacgg ttttttccga
     1321 tccctggcgc ggcgctcgca tcccctgtcg ctgcgcggcg gcacttcgcg gtggcagacg
     1381 cccacgccgc aagcgattct gacggctcag atggcgtcgc cgtcttccgg cgcggcgccg
     1441 ctgtcaccat cctcatgtcc gcttcgtggc ggtgccatcg cgcggtcgcg ccttgcgcgg
     1501 gccttcatct cgaccttctg ccgggattgc ggcggcttgt ccccggcggg ccagccctcg
     1561 cgctgcgcgc ctcgcgtgcc gtccgtttcc tcggtctggt cgtgcagcag cacgacgttg
     1621 gtcggatagg gcatgtcgat ggcggcctcg tccaacgcgg tcgaaatcgc ctgaatgacc
     1681 cgcgcctgcg tatgaaccac gttggtgcgg accggatcgg tccaccagcg cacccgcatc
     1741 gtcagctggc tttcgtcgat tccccagggc agggcttcgg cggcgggttc gtcagcgaca
     1801 ccctcgacaa ccgaaaccgc ctcgaggatc acggccctgg cgcggtccca gtcgtcggca
     1861 tagccgattc ccacatcgta atccgaccgc cgcttgtcat aggccgtgtt gacgaccacc
     1921 gaattcgtat agacctgcga attgggaatg acgacgcggc gattgtcata ggtccggatc
     1981 atcgtggcgc gggtctggat atcctcgacc gtgccttcgt gaccgcccgc ctcgatctgg
     2041 tcgccgacct tgaaagggcg ctgcagcagg atcaggatgc ccgacagcat gttttgcagg
     2101 atgtccttga aggcaaaacc gatcgcgaca gaaccgatgc caagcccggc cagcatgtcg
     2161 ccgggtttca gcgagggcag caccaccgtc atcgccagca gaaagcccag cacgatgatc
     2221 gcccagccga ccagcgagcc gccgacattg gccagcgccg ggcggtcgtg gcggaccagc
     2281 gtcttgcgga tcgaccaggt caccaggacc gagacaagcc aggccacgag aaacaggacg
     2341 ctggcggcga tcaggttcgg aatcagcgag atgaaaccgt tgatccagct ttgcagcttt
     2401 tcgacgagac caccgaaatt cgtgccgatc gcacccagtt gatccatccg ccccgccgcc
     2461 ccgttcattc ttctgccctg gataaagcgg atcgggacgg ctctggttcc cgaccctgcc
     2521 cggcccgcgc ggcgaccgac cggacgcaat ccgcaccgct tgcccgcccg gccaaagcag
     2581 gacaccatcc ccgaaccgga agaacggagt ccgccatgcc ccgccccgca ttgtttctgc
     2641 tgctggttct tgccgccccg gcgcaggcgg caccggcctt gtccctgccc ctgggcgagg
     2701 acgccgaagt cgttccagcc cgctatatct gcgacgatgg cggcacgatc gcggtgcaat
     2761 atgtcaatgc cggacccaac cgcctcgccc tgctgcgcct cgacggcgag gaacgtctgt
     2821 tcgtcaacgt catatcggcc tcgggcgcgc gctatgtcgc gggcgaatac gaatggtgga
     2881 tcaagggcga ccaggccagc ctgcgcaacg ccatgcggga cggcgacgcc cggagctgca
     2941 ggacccgcga tggcgcctag atcggctcga tctgcccttg cacccaggca cgcaggatga
     3001 cctgcgccac cgcccccttg cgggccggcg cgatccggtc gtggcggccc tccagcgcct
     3061 cggcgatctg gttccgggga acccagatcg cgtcctccag ttcggtcgga tccagtgtga
     3121 tcgcgcggct ctcggcgcgc gccacgcagc cgatcatcag cgaggccgga aagggccagg
     3181 gctgcgaggt gacatagcgc accgcgccca ccgtgatccc ggcctcctcc atcacctcgc
     3241 ggcgcaccgc ctcctcgacc gtctcgcccg gctcgacaaa gcccgccagc agcgaataca
     3301 tccgctcggg ccacagcgac tgacgaccca gaagaacccg gtcgccgtcc agaaccagca
     3361 tgatcaccac cggatcggtg cgcgggaaat gctgccgacc gcaggcgggg cactcgaacc
     3421 gccagccggc atggctgaca cgattgcggg cgccgcaacg ggcgcagaag ccatgcgtca
     3481 gccgccattc gaagatgccc ttggcggccg ccgcgatccc ggcatcgcga tggtcgatct
     3541 cggccatgat cgcgcgcagg tcgatgaatt tccgcgtctg cgacagatcc agagtgtggc
     3601 ggtcgatgaa ttcggcaggc ggatggtcgg gcggcgccag atatgagaca tcggcggcga
     3661 aatgcgcggt cccggccata tccaggccca tgaacaccag cggttcggga caatccgcga
     3721 ccagatcatc gctcgccggc agccaggcga ggcgcggccc ggtcggtgtc aggtcgaaca
     3781 gcggcttgcc acgccagaac ggcagcacca gggtatcggt gcgcgacagc atccgggcga
     3841 tcccggcgcc atcgccgcgc agccggtcgg cgcgatccag aaaactgccg gcaaaggtga
     3901 cttcggattc ggggatcatg gcgcgaccct gcaccctgcg gatgcgcccc gcaagaacac
     3961 agtcgcgacg cgcccggccc gccacgcagg gcgatcggga aggcggggcg ggccagaccc
     4021 ggcccggtcg ctgccgctgg gccgaatgcg cgcgttccgc gcgcgacggc gccggcagca
     4081 gatcttgcgc gccttcgaac gacacccgcg caaggcgccc gtcatgcccg catgtccgcc
     4141 cctgtgccgg aaccgcgtgc aacgccgcag gcggtgcatc cgctgtgtac gccctgtgca
     4201 ccgcctgtgc gcgctctgag cggtgcggca ccccgcgaat gctggccggt tcgcgccatc
     4261 gccgcgcaac gccctgccgg tgaccgggct gccgcgctcg ccgctttcaa tcgtcctgca
     4321 acggggctag atacggcgcc gactgacaag gacgcaaccc catggcccgc catctcatca
     4381 cctctgcact gccctatatc aacggtatca agcatctggg caatctcgtc ggatcgcagc
     4441 tgcccgccga tctctatgcc cgctatctgc gtgcgcgcgg ccacgaggtg atgttcatct
     4501 gcgccaccga cgaacacggc acgccggccg aactggccgc cgccaagacg ggcgagccgg
     4561 tcgcccggta ttgcgcccgg atgcaccgga tccaggcgga tctggccagg ggcttcggcc
     4621 tcagcttcga tcattacggt cgctcctcca gcgaccggaa ccgacgcctg acacagcatt
     4681 tcgcgggcaa gctggccgat aacggctata tccgcgaagt cgcggaaaaa caggtctatt
     4741 ccatcgatga cggccgcttc ctgcccgacc gctatatcga gggtacctgc cccaattgcg
     4801 gctatgacaa ggcccgtggc gaccagtgcg agaactgcac caagcagctt gatccgaccg
     4861 acctgatcga gccgcgcagc gccatcagcg gcagcaccaa tctggaagtg cgcgagacca
     4921 agcacctcta tctgcgccaa tccgcgctga agggcgagat tgccgaatgg atcgacagca
     4981 agaaggactg gccgatcctg acgacctcga ttgccaggaa atggctgaac gacggcgacg
     5041 ggttgcagga tcgcggtatc acccgcgacc tgtcatgggg cgtgccggtc aagcgcggcg
     5101 atcaggactg gccgggtatg gagggcaagg tcttctatgt ctggttcgac gcccccatcg
     5161 aatatatcgc cgcgactgcc gaatgggccg atgccaatga tcgcaccgag gccgagtggc
     5221 gcgcctggtg gcgcaccgac gagggcgccg acgacgtgac ctatacccag ttcatgggca
     5281 aggataacgt gcctttccac actctcagct ttccggtgac ccagatcggc gcgggtgagc
     5341 cgtggaagat ggtcgactat atcaagtcgt tcaattacct gacctatgac ggcggacagt
     5401 tctcgaccag ccagggccgg ggcgtcttca tggatcacgc actggacatc ctgccggccg
     5461 attactggcg ctggtggctg ctgtcccatg cccccgaatc cggcgacagc gaattcacct
     5521 gggagaattt ccagcaatcg gtgaacaagg atctggccga cgtgctgggc aatttcgtca
     5581 gccgcgtgac caagttctgt cgggcaaagt tcggcgaggc ggttcccgga ggcggcagct
     5641 ttggccagcc cgaacagaac ctgatcgccg cgctgaccac gcgcctgcgc gcctacgagg
     5701 acgccatgtc acgcatggag gtcc
//
LOCUS       DTVW01001214            1799 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_251950, whole
            genome shotgun sequence.
ACCESSION   DTVW01001214 DTVW01000000
VERSION     DTVW01001214.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1799)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1799)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1799
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_251950"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..776
                     /locus_tag="EYO87_16185"
     CDS             <1..776
                     /locus_tag="EYO87_16185"
                     /inference="COORDINATES: protein motif:HMM:PF01041.15"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="pyridoxamine 5-phosphate oxidase"
                     /protein_id="HIC67498.1"
                     /translation="LLGNPARLDRLRAICDRHDLLLIEDNCESMGASLDGRAAGAWGD
                     LGTFSSFFSHHICTMEGGMVVTNDRKMHHNLICLRAHGWTRGLPDDTHLPVDPDPFQR
                     QFRFVLPGYNLRPLEMEGATGTEQLRKLPEFVEERRRNAAIFGKAFADHPDLDIQAET
                     GMSSWFGFAMILKNRLAGRRGALVAALTQGGIESRPVVAGNFLNNPVIAKLDHSVAGP
                     IVAADRIDRDGLFTGNHHYPIPDQIARLREIVDRVAGQA"
     gene            773..>1799
                     /gene="gmd"
                     /locus_tag="EYO87_16190"
     CDS             773..>1799
                     /gene="gmd"
                     /locus_tag="EYO87_16190"
                     /EC_number="4.2.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006199483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HIC67499.1"
                     /translation="MTRRAFITGITGQDGAYLADLLLEKGYEVHGLKRRSSSFNTARI
                     DHLSIDPHRNRRFHLHYGDMTDGSALIRTLAEIRPDEIYNLAAQSHVRVSFDMPEYTA
                     NADAIGPLRLLEAMRLLNLAGTRFYQASTSELYGKAAEVPQTETTPFHPRSPYGAAKL
                     YAYWITVNYREAYGLFASNGILFNHESPVRGETFVTRKITRAVAALQMGLQDCLYLGN
                     LDALRDWGHARDYAEGMWRILQHDRADDFVLATGRTHSVRDFCEAAFAETGTRLEWRG
                     AGLDETGHDAATGRCLIRIDPTYFRPAEVDVLQGDAAKARRQIGWEPKVSFDQLVDMM
                     VEADLELA"
BASE COUNT          323 a          601 c          566 g          309 t
ORIGIN      
        1 acctgctggg caatccggcg cggctggacc ggctgcgcgc catctgcgac cgccacgacc
       61 tgctgctcat cgaggataat tgcgaatcca tgggcgcgtc gctggacggg cgggcggccg
      121 gggcatgggg ggatctgggc acgttttcca gcttcttctc gcatcatatc tgcacgatgg
      181 aaggcggcat ggtcgtcacc aatgatcgca agatgcacca caacctgatc tgcctgcgtg
      241 cccatggctg gacccgcggc ctgcccgacg acacccatct gccggtcgat ccagacccgt
      301 tccagcgtca gttccgcttc gtgctgcccg gctataacct gcgcccgctg gagatggagg
      361 gggcgacggg aaccgaacag ttacgcaagc tgccggaatt cgtcgaggaa cggcgccgca
      421 acgccgcgat cttcgggaag gctttcgcgg accatcccga tctggatatc caggccgaaa
      481 ccggcatgtc gtcgtggttc ggcttcgcga tgatcctgaa gaatcggctg gcgggccgtc
      541 gtggcgccct tgtcgccgcg ctgacccagg gcgggatcga aagccgcccc gtcgtcgccg
      601 gaaatttcct gaacaatccc gtcatcgcca agctggatca cagcgtcgcg ggaccgattg
      661 tcgcggccga tcgcattgac cgcgacggct tgttcaccgg caaccaccat tacccgatcc
      721 ccgaccagat cgcgcgcctg cgcgagatcg tggaccgcgt cgcgggacag gcatgacgag
      781 acgcgccttc atcaccggga tcaccgggca ggacggggcc tatctggccg atctgctgct
      841 ggaaaagggc tacgaggttc acgggctcaa gcgccggtca tccagcttca ataccgcgcg
      901 aatcgaccat ctgtcgatcg acccgcaccg caaccggcgc tttcatctgc attacggcga
      961 catgaccgat ggcagcgcgc tgatccgcac cctggcggaa atccggccgg acgagatcta
     1021 caacctcgcc gcccaatccc atgtccgcgt cagtttcgac atgccggaat acaccgccaa
     1081 tgccgatgcc atcggccctc tgcgtctgct ggaggcgatg cgattgctga acctggccgg
     1141 aacgcgcttc tatcaggcct cgacatccga gctgtacggc aaggcggccg aggtgccgca
     1201 gaccgagacg acgccgtttc atccgcgctc gccctatggc gcggccaagc tttatgccta
     1261 ctggatcacg gtgaattacc gcgaggccta tggcctgttt gcgtccaacg gcatcctgtt
     1321 caaccatgaa agcccggtcc ggggcgaaac cttcgtgacg cgcaagatca cccgcgcggt
     1381 ggccgccttg cagatgggac ttcaggattg tctctatctg ggcaatctgg acgccctgcg
     1441 cgactggggt cacgcacgag actatgccga gggcatgtgg cggatcctgc aacacgacag
     1501 ggccgatgat ttcgttctgg ccacgggccg gacccacagc gtccgcgatt tctgcgaggc
     1561 ggcctttgcc gagaccggca cccggctgga atggcgcggc gcggggctgg acgagaccgg
     1621 gcacgacgcg gccacggggc gctgcctgat ccgcatcgac ccgacctatt tccgccccgc
     1681 cgaggtggac gtcctgcaag gcgacgccgc caaggcccgc cgccaaattg gctgggagcc
     1741 gaaggtcagt ttcgaccaac tcgtggacat gatggtcgag gccgaccttg aactggccg
//
LOCUS       DTVW01001215            2316 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_254586, whole
            genome shotgun sequence.
ACCESSION   DTVW01001215 DTVW01000000
VERSION     DTVW01001215.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2316)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2316)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2316
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_254586"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..118)
                     /locus_tag="EYO87_16195"
     CDS             complement(<1..118)
                     /locus_tag="EYO87_16195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_888393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HIC67500.1"
                     /translation="MTGTAPLSGLRVLDLTELLPGPYATQQLAEMGAEVIKVE"
     gene            complement(115..933)
                     /locus_tag="EYO87_16200"
     CDS             complement(115..933)
                     /locus_tag="EYO87_16200"
                     /EC_number="4.1.3.34"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009504611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citryl-CoA lyase"
                     /protein_id="HIC67501.1"
                     /translation="MTVKTDIGFTTRDRIYVRGRDLADEILGKMDFVDMIYFTATGKE
                     PDARTRAMTNAIIVTATDHGLTPSAIAARMTILGAPESLQGAVAAGLLGAGNHFLGTM
                     QNAAAFTRDEIGELSDSDDDAAYAARAQEAVRAFRAARRIVPGLGHPIHVDGDPRTPV
                     LRRIAGENGFDGRHWRFMAAVEAAAREEYGRLLPINAAGAVGATVSDMGLAPIWARAF
                     ALIGRSAGLLAHLMEELENPQGQKIWDMILEQDDSAECAGIADPDRADSTGEQK"
     gene            complement(930..>2316)
                     /locus_tag="EYO87_16205"
     CDS             complement(930..>2316)
                     /locus_tag="EYO87_16205"
                     /inference="COORDINATES: protein
                     motif:HMM:PF13549.4,HMM:PF13607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="CoA-binding protein"
                     /protein_id="HIC67502.1"
                     /translation="ARAGKPVVAMKVGKSDYGVAATRSHTAALAGSAAVTSALFRQHG
                     IVEVEDLDELIDTVALFERVGIAPRRGICVYSFSGGTAALAADMVGSAGLILSELAPG
                     TRAGLRALAPSYAAVDNPVDLTTQVFTQDKLNRDCLSLVARDPATDVVLLPIPADYGP
                     ITDRSADDMVALAPDSPALLLPVWMSGHRAAGYATLNAAGLAPFRSLGKAVTALKRLI
                     WRGDWSPSGTSTLALPAFPPGELDEAAAKAVLADLGLTVPEGRVVTSARQAGEAARGI
                     GFPVVLKALVPGLLHKTEAGAVAVGLMDEQALAAAWGAMMTSLSAQGHRLERALVERM
                     EQGPGVEVMAGLHRDPVFGPVVSFGLGGVMVEALSDVTHRAAPFGRDEALAMIDEIRG
                     RALLGPLRGRPGADLGALADLLVILAALGARGDIAEMDLNPVRAGPAGATVLDAVILR
                     APTEIEGKARQ"
BASE COUNT          379 a          828 c          762 g          347 t
ORIGIN      
        1 gttcgacctt gatgacctcg gcccccatct cggccagttg ctgcgttgca tagggcccag
       61 gcagaagctc ggtcagatcg agaacgcgaa gccccgaaag cggtgcagtg ccggtcattt
      121 ttgctctcct gtgctgtctg cgcggtccgg gtcggcaatc ccggcgcatt ccgccgagtc
      181 gtcctgttcc aggatcatgt cccagatctt ctgaccctgc ggattttcga gctcttccat
      241 cagatgcgcc agaagcccgg cggatcggcc aatcagggcg aaggcccgcg cccagatcgg
      301 ggcaagcccc atgtccgaaa cggtggcccc gaccgcgccg gcggcgttga tgggcagcag
      361 acgtccatat tcctcgcggg cggcggcctc gacggccgcc atgaagcgcc agtgccgccc
      421 gtcgaaccca ttctcgccgg cgatccggcg caggaccggc gtgcgggggt cgccgtcgac
      481 atggatcgga tgaccgaggc ctggcacgat ccggcgcgcc gcgcgaaagg cgcgcacggc
      541 ctcttgcgcg cgggcggcat aggctgcgtc gtcgtcgctg tcggacagct cgccgatctc
      601 gtcgcgggta aaggccgcgg cgttctgcat ggtgccgaga aaatggttcc ccgcgcccag
      661 caagcccgcg gccaccgcac cctgaagcga ttccggcgcg ccgagaatgg tcatccgcgc
      721 ggcgatggcg ctgggggtaa ggccgtgatc ggtggcggtg acgatgatcg cgttggtcat
      781 cgcgcgggtg cgggcatccg gctctttccc cgtggcggtg aaatagatca tgtcgacgaa
      841 atccatcttg cccaggatct catcggccag atcgcgcccg cgcacataga tgcggtcgcg
      901 ggtggtgaaa ccgatgtccg tctttaccgt cattgccttg cctttccttc tatctcggtc
      961 ggagcgcgca ggatcaccgc gtcaagcacc gtcgcacccg ccggaccggc gcgcaccgga
     1021 ttgagatcca tctccgcgat gtcgccgcgc gcacccaggg cggccaggat cacgagaaga
     1081 tcggccagcg cgcccagatc ggcgccgggg cggccgcgca gcggacccag cagtgcgcgt
     1141 ccgcggatct cgtcgatcat cgccagcgcc tcgtcccgcc caaagggcgc ggcgcggtgc
     1201 gtgacgtcag aaagcgcctc gaccatcacg ccgccgaggc cgaagctcac caccgggccg
     1261 aacaccggat cgcggtgcag tcccgccatc acctcgacgc ccggcccctg ttccatgcgc
     1321 tcaaccagag cgcgctccag cctgtgcccc tgtgctgaaa gcgatgtcat catcgcgccc
     1381 caggccgccg ccagcgcctg ctcatccatc agcccgacgg ccacggcccc ggcttcggtc
     1441 ttgtgcagaa gaccgggcac cagcgccttg agcaccaccg gaaagccgat cccgcgcgcc
     1501 gcctcgcctg cctgtctggc actggtcacg acccgtcctt cgggcacggt cagacccagg
     1561 tcggccagca ccgccttggc ggcagcctcg tcaagctcgc cgggcggaaa tgcgggtaga
     1621 gcaagcgtgg aggtccccga ggggctccag tcgccgcgcc agatcagccg cttcaacgcc
     1681 gtcactgcct tgccgaggct gcgaaaaggc gccagccctg ccgcgttcag cgtggcatag
     1741 ccagcggcgc gatgcccgct catccagacc ggcaggagca gagccgggct gtccggcgcc
     1801 agcgcgacca tgtcgtcggc ggaccggtcg gtgatcgggc cgtagtcggc gggaatcggc
     1861 agaagcacaa catcggtggc cgggtcccgc gccaccagcg acaggcaatc gcggttgagc
     1921 ttgtcttggg tgaagacctg ggtggtcagg tccaccgggt tatcgaccgc cgcataagac
     1981 ggggccagcg cacgcaaccc cgcgcgggtg ccgggggcca gttcggacag gatcagcccg
     2041 gcgctgccca ccatatcggc ggccagcgcc gctgtgccac ccgagaagga atagacgcag
     2101 atcccccgcc gcggggcgat gccgacgcgc tcgaacagcg ccaccgtatc gatcaattcg
     2161 tccagatcct ccacctcgac gatgccatgc tggcgaaaca gtgccgaggt gaccgccgcc
     2221 gatccggcaa gcgcggcggt gtgcgaacgg gtggcagcaa cgccatagtc cgacttgccc
     2281 accttcatcg ccaccaccgg cttgccggcg cgagca
//
LOCUS       DTVW01001216            1113 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_254668, whole
            genome shotgun sequence.
ACCESSION   DTVW01001216 DTVW01000000
VERSION     DTVW01001216.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1113)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1113)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1113
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_254668"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..721)
                     /locus_tag="EYO87_16210"
     CDS             complement(<1..721)
                     /locus_tag="EYO87_16210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018250674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HIC67503.1"
                     /translation="MLRRAVLGSAVLLAASLASSTGGRATGPARKSVPIVSRPGVWQA
                     PAGGRQELLWAATVPLAKPDSGNASEETGNGSAIVGGRMWHWAGSITRPTMTVFRPRG
                     RNTGTAMLVLPGGGFTVVAMDLEGTEICDWAVRQGITCAVLKYRVPQAWPVVNGRQQR
                     PKVLLGLEDAQRAMGLLRVRATRYGIDPHRIGVIGFSAGAYLAAAVSNTEARTYPIAD
                     AADRQSPRPDFAVIAYTARMLD"
     gene            906..>1113
                     /locus_tag="EYO87_16215"
     CDS             906..>1113
                     /locus_tag="EYO87_16215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017979598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HIC67504.1"
                     /translation="MATIAIYSSKGGVGKTTLAVNLAYCAATLSKRRTALWDLDPQAA
                     SSWVLGRDPAGDQARALFTKDTKVA"
BASE COUNT          183 a          429 c          341 g          160 t
ORIGIN      
        1 cgtcgagcat gcgcgcggta taggcgatca ccgcaaagtc ggggcgcggc gattggcgat
       61 cggcggcatc ggcgatggga taggtccgcg cctcggtatt gctcaccgcc gcggccagat
      121 aggcgccggc cgaaaagccg atgacgccta tgcgatgcgg atcgatgcca tagcgcgtcg
      181 cccgcacgcg cagcagcccc atcgcgcgct gcgcatcctc cagccccaac aacaccttgg
      241 gccgctgctg ccgcccgttc accaccggcc atgcttgcgg cacgcggtat ttcagcaccg
      301 cgcaggtgat cccctgccgc accgcccaat cgcagatttc ggtcccctcc aggtccatcg
      361 cgacgacggt gaagccgccg cccggcagca ccagcatggc cgtgcccgtg ttgcgccccc
      421 gcggccggaa caccgtcatc gtcggccgcg tgatcgatcc cgcccaatgc cacatccgcc
      481 cgccgacgat cgccgaaccg ttgccggttt cttccgacgc attgccgctg tccggcttgg
      541 cgagcggaac ggtggccgcc cataatagct cctgccgccc acccgccggc gcctgccata
      601 cgccgggccg cgaaacgatc ggcacgcttt tacgcgccgg cccggttgcc cgcccacctg
      661 tcgacgatgc aagcgacgcg gcaagcagga ccgcagaccc aaggacggca cggcgcagca
      721 tatcgaactc ccgatcccga aagcgacgca gcgcatcgcc acccgatgcc gccccgcctt
      781 gcgtccggcc cgtatcgggc ggcctcgcgc ccgacaaagc acctttgctc gggccagccc
      841 ccagtttccc tcatggcgcg gatggcgcat tgccccatcg ggtccagaac ggtacgatcc
      901 cacccatggc aacgatcgcg atctacagtt cgaagggcgg cgtcggcaaa accacgctgg
      961 ccgtcaatct ggcctattgc gccgccaccc tgtcgaagcg gcgcaccgcc ttgtgggacc
     1021 tcgatcccca ggcggcgagc agctgggtgc tgggccgcga tcccgcgggt gatcaggcgc
     1081 gcgcgttgtt caccaaggac accaaggtcg cgc
//
LOCUS       DTVW01001217            1770 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_259847, whole
            genome shotgun sequence.
ACCESSION   DTVW01001217 DTVW01000000
VERSION     DTVW01001217.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1770)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1770)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1770
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_259847"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..390)
                     /locus_tag="EYO87_16220"
     CDS             complement(<1..390)
                     /locus_tag="EYO87_16220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009815656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit A"
                     /protein_id="HIC67505.1"
                     /translation="MSDEVPNDPDQNLQAEPLSRAIGERYLTYALSTIMNRALPDARD
                     GLKPVHRRILYAMRELRLAPNGAFRKSAKITGDVMGNYHPHGDAAIYDAMARLAQDFA
                     MRYPLVDGQGNFGNIDGDNPAAARYTEA"
     gene            complement(478..843)
                     /locus_tag="EYO87_16225"
     CDS             complement(478..843)
                     /locus_tag="EYO87_16225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008551286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67506.1"
                     /translation="MFRMRRLLLLFVLMPGVALANSPRVVGIEAMSQDGTWRFDVAVE
                     HADEGWDHYADAWQILGADDTVLGTRELVHPHVDEQPFTRSLSGVNLPQDLTQVRIRA
                     HDSVHGWGEAVTFDLPDQP"
     gene            1024..1707
                     /locus_tag="EYO87_16230"
     CDS             1024..1707
                     /locus_tag="EYO87_16230"
                     /inference="COORDINATES: protein motif:HMM:PF08239.9"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67507.1"
                     /translation="MTAGCGESRNACRPRGGVAPFAGSADRQKWERAPRIGRSGGGSF
                     IGAAQEVIRKQGRDMVRLGVFLVVTLIGLYLVMLVFGSGDLRAGRDGPQPRAIAPEKP
                     DPRAEARRDPAPRPAPEVVEAAAQTPQKVQEFPGPPLQPSPEYAGRTPQDPAQAPPGT
                     QGPVFYVTGNRVNFRAGPSTGDRVIGSLSQGAAVEVLGPTDDAWINIRDSDGRVGYMS
                     AQFLSQARP"
BASE COUNT          288 a          584 c          589 g          309 t
ORIGIN      
        1 cgcctcggta tagcgcgcgg cggccgggtt gtcgccgtcg atattgccga aattgccctg
       61 tccgtccacc aaaggatagc gcatggcgaa atcctgggcc agccgcgcca tggcgtcgta
      121 gatcgccgca tcgccgtggg ggtggtaatt gcccatcacg tcgccggtga tcttggccga
      181 ttttcggaag gcaccgttgg gcgccagcct gagttcgcgc atcgcataga gaatgcggcg
      241 atgcaccggc ttcagtccgt cgcgcgcatc gggcagcgcg cggttcatga tcgtggacag
      301 cgcgtaggtc agatagcgtt cgccgatcgc ccggctgagc ggttcggcct gaaggttctg
      361 gtcgggatcg ttcggcactt cgtcggacat gacggatgga taggccgagc cgcgctgccg
      421 gtccagacga aaagcgcagg aaacgggcgc ggaaagcccg gcccgcggcg cctcatctca
      481 aggctgatcg ggcagatcga aggtcaccgc ctcgccccag ccatggacgc tgtcatgggc
      541 gcggatccgc acctgtgtca ggtcttgcgg caggtttacc ccgctcagcg agcgggtgaa
      601 gggctgttca tccacatgcg gatggaccag ttcccgcgtt cccagaacgg tatcgtccgc
      661 gccaaggatc tgccacgcat cggcataatg gtcccagcct tcgtcggcat gttcgaccgc
      721 gacatcgaac cgccacgttc cgtcctggct catggcctcg attccgacca cgcgcggcga
      781 attcgccagc gccacgccgg gcatcagcac aaacagcaaa agcaatcgtc gcatccggaa
      841 catttccttt tcatctcgac gccgtaagcg gaatcaggac cgtcccatcg acgcggcttc
      901 cgcaaccata gcaggccggt ccgcaaatgc tgagagcgac ggcgttcacg atcccttgcg
      961 gccccgcccc ttgcgccccc gccccttgcg gccccgcccc ttgcaacccg gcacgaacgt
     1021 tccatgacgg caggatgcgg tgaatcgcgg aacgcttgcc gcccgcgggg cggggttgcg
     1081 cccttcgccg gctctgcgga tcggcaaaaa tgggaacggg cgcctcgaat cgggcgttcg
     1141 ggtggcggat cgtttatcgg ggccgcgcaa gaggtcatcc ggaaacaggg tagggatatg
     1201 gtcagacttg gtgtgttctt ggtggtgacg ctgatcgggc tgtatctggt catgctggtc
     1261 tttggttcgg gcgatctgcg tgcggggcgc gacgggccgc agccccgggc aatcgcgccc
     1321 gaaaagcccg atcctcgggc cgaggcgcgc agggatcccg ctccccggcc cgcccccgag
     1381 gtcgtcgagg cagccgcgca gaccccgcag aaggtgcagg aatttcccgg cccgccgctg
     1441 caaccttcgc ccgaatatgc gggacggaca ccacaggatc cggcgcaggc cccgcccggc
     1501 acgcaggggc cggtcttcta tgtcacgggc aaccgggtga atttccgcgc cggtccctcg
     1561 accggcgacc gggtgatcgg gtcgctttcg caaggggcgg cggtcgaagt cctgggtccg
     1621 accgatgacg cctggatcaa cattcgcgat tccgacggcc gcgtcggcta tatgtccgcg
     1681 cagtttctca gtcaggcgcg gccctgatca tggcgggacg ggtgctgatc accggctgtt
     1741 cgtccggcat cggtctggat gccgcgcgtc
//
LOCUS       DTVW01001218            2050 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_266649, whole
            genome shotgun sequence.
ACCESSION   DTVW01001218 DTVW01000000
VERSION     DTVW01001218.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2050)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2050)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2050
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_266649"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(305..583)
                     /locus_tag="EYO87_16235"
     CDS             complement(305..583)
                     /locus_tag="EYO87_16235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67508.1"
                     /translation="MSGRQDHHRETIEGGGRIVVMMALIIASAIATALVLGLTGASWG
                     MIVLGYVLGGWVGLILGVPVLLLAGRCGKRTARRGAGTTRKPLRDGAE"
BASE COUNT          339 a          671 c          714 g          326 t
ORIGIN      
        1 tcatcgccca ggacgcgccc tgcaccgcca tcgccgtggc ggtgacgaaa gagccggtca
       61 ggatcagcag aagcagggca gggagcatgg catcggtcgc ggtcggaaca gggaccccgc
      121 cgatcatagg cggcccgagc cgcggcccga agcgcgcttt gcgcagcatt ttaatcgaaa
      181 tgttcccgat cgggtccgga accggggcct tgggcggcga agcgggccgg cagcgcgggc
      241 tttcagggac cggggaccgc gtgggggcgg cccgcgccgg ccgggcgaaa cggcgcccgg
      301 catgtcattc cgccccgtcg cgcaggggct tgcgggtggt ccctgcaccc ctccgcgccg
      361 tccgcttgcc gcagcgcccg gccagaagca ggaccggaac gcccaggatc aggccgaccc
      421 agccgcccag cacatagcca agcacgatca ttccccagga ggcccccgtc aggcccagaa
      481 ccagggcggt tgcgatcgcg ctcgcgatga tcagcgccat catcacgacg attctgccgc
      541 cgccttcgat tgtttcacga tgatgatcct gccggccgct catgcgccac agcataggaa
      601 agacggcaaa caacttaaag ttgttattgc cgctggcgcg accttttcac gtgggtgtca
      661 ggccgggatg gcatgggccg ggtcagggca ggaaatcgaa actgcggttg atgcccagaa
      721 acaggcgttc atcgtcgttg cggctgccat ccccgctttt gccgcggacc atggtatagc
      781 cggcattcag cgacagatcc gcggtcagcg cgcggctgta atcgatgctg atggcgaagg
      841 ttttggcatt cagggcatcg cccgactgca cctggctttc gcgatagcgg atcgacccgg
      901 acaggctgga aatctcgtcg aactggcggg aataggcggc ctcgaaattc gtgttgatcg
      961 cctcgttgcc gtcattgtcc accaccggca cgcggctgag cgaggccgtg atgtcggaga
     1021 ccggccccag atcgcgcgca tatccggcct ggaagatcgg gtcgatgctg ccggcaaacc
     1081 gcgtcgcgcc cagggcgaag gacagatcgt atcgcggcgt ccggatgctg cggcccagca
     1141 gcagatcctc gcgccggccg gcggtgtcgg gttcggatga aaaggccagg gtatattcgc
     1201 cggccggccg cgccaggctg ccgttcagcc gcagcgccac gccccgggcg cgcctggaca
     1261 ggccggtatc gcgctcgacg cggcggatat cggtccaggt cgtctccaga tccaggttgg
     1321 cggccttgct gacctgcaac gaggcccccg cccccaattg cgagatacgg ctgtcggtgc
     1381 cgccgccggc actgtcggtg cgatcggccc cggcgacgat ccgggcccgg atcagcggtg
     1441 tgggttccag atagatccgg ccggcgaggc tgccggtgcg gctgtcgacc agatccggat
     1501 cggtggtgcc gctataggcg cggcggctgt attcaagact gaattcgccg cccagcttgg
     1561 cctggctgcc gaaggcatag cccagccggg cgctggtcgt ggtgacgctt cccggatcca
     1621 gcgtcaccag cgtgccggta tcctggtcga agaaaatctc gcggtccaga tcggtctcgc
     1681 gatagttcag ccccgcctcc agcgaggcat tgcgggcgaa gcggcgatag gacaggcgtg
     1741 cctgccggtc gccgaagccg atgaagttcg tctgcttcgg gtcgccctcg gtcagcggca
     1801 gcgacaagcc cagatccagg gtctgggacc gggtggcgcg gcggaaggtc agatccagcg
     1861 gcgtgacgcc gatcacatcg ccattgtcca gcgccagctg ctggccgatg ctgaaccggg
     1921 cgatggcagc cggctgatcg tcggtctggg cattggccgc cgccgtcggc agcagcgcca
     1981 gcaggaacag cggcgcggcg ctgcggatca ggccgggtcg tgccgtgccg tgccgtggct
     2041 tcattcgaaa
//
LOCUS       DTVW01001219            1703 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_270178, whole
            genome shotgun sequence.
ACCESSION   DTVW01001219 DTVW01000000
VERSION     DTVW01001219.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1703)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1703)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1703
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_270178"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..480)
                     /locus_tag="EYO87_16240"
     CDS             complement(<1..480)
                     /locus_tag="EYO87_16240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hydratase"
                     /protein_id="HIC67509.1"
                     /translation="MTVSAFDVASAAELLLKARGQGSPVAVTAPEPADRTAARQVQEA
                     VMAGLCDPGGVWKMALLGGVTREAAILPRALLHETGTRPILPGHAAIEVETALILDRD
                     PGPRPTLDAIAEIRLAFEFVASRLRGNCAPLWKMADSFSSAGIVMGEPIGGWRDGLPD
                     "
     gene            complement(552..671)
                     /locus_tag="EYO87_16245"
                     /pseudo
     CDS             complement(552..671)
                     /locus_tag="EYO87_16245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010396971.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sugar kinase"
     gene            complement(674..1593)
                     /locus_tag="EYO87_16250"
                     /pseudo
     CDS             complement(674..1593)
                     /locus_tag="EYO87_16250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005796528.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxyacid dehydrogenase"
     gene            complement(1590..>1703)
                     /gene="glnQ"
                     /locus_tag="EYO87_16255"
     CDS             complement(1590..>1703)
                     /gene="glnQ"
                     /locus_tag="EYO87_16255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005796529.1"
                     /note="similar to ATP-binding component of ABC
                     transporters; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine ABC transporter ATP-binding protein
                     GlnQ"
                     /protein_id="HIC67510.1"
                     /translation="DRVIFMDKGVIVEENAPNEFFGNPQNERLQTFLGQIA"
BASE COUNT          286 a          610 c          554 g          253 t
ORIGIN      
        1 atcgggcagc ccgtcgcgcc agccgccgat cggttcaccc atcacgatgc cggccgagct
       61 gaaactgtcg gccatcttcc agagaggtgc gcagttcccc cggagacgcg aggcgacgaa
      121 ctcgaacgcc agacgaattt cggcaatggc gtcgagcgtc ggccttgggc cgggatcacg
      181 gtcgaggatc agcgccgttt cgacctcgat cgcggcatgg ccgggcagga tcggcctggt
      241 cccggtttcg tgcaacaagg cgcgcggcag aatcgcggcc tcgcgggtga cgccgccaag
      301 cagcgccatc ttccagacgc cgccgggatc gcaaagccct gccatcaccg cctcttgcac
      361 ctggcgggcc gccgtgcgat cggccggttc gggcgccgtg acggcaacgg gtgacccctg
      421 cccgcgtgcc ttcagaagaa gttcggcggc cgaggccacg tcgaaagcgg ataccgtcat
      481 gctgttgccc tctgttccgg gaaaagggcg cccaggcagg acggatagcg gacctgatcc
      541 cgcgcgcttg gccgcgcaag atggatcgcg gtgttcaacg tgtctccgcc cgcgcgcggg
      601 tcgaaggtcg agggcgcatc cggacacgcc gagtattcga ccagcggccc tccgatgcag
      661 agagagcgca tggtcatgtc gcgtatggcg tcggcagcgg ccggccggcg acatgggcgg
      721 gatgttgtcc agcaccagtt gcgccatcgc gcgccgcgcc tcggcggtgg ccgagccgac
      781 atgcggcgtc agcacacaat tcggcgcgtc cagcagcgcc cgcggcacgc atggctcgtc
      841 gtcgaagaca tccagtcccg ccccggcaat gaccctttcg gacaatgccc gcgccagcgt
      901 ctcggcatcc acgaccgggc cgcgcgcgac attgacgacg atcccttcgg atccaagcgc
      961 cgccagcacg tcggcatcga ccagaccgcg cgtcccggcg ccccccgccg ccgtcacgaa
     1021 caggacatcg caatcgcgcg ccaactgccg cgcgtcaggg cgaaaggtat cgggcgcgcc
     1081 gggcttttcc gcgcgtgcgg tatagaaaac ctgcatcccc attccgcgca gcagatcggc
     1141 cagcctgcgc ccgatccgcc catagcccag gatcccggcc cggcgttcca gcacggagct
     1201 gccaagcgca agcttggcac ccgcagccca ggttccggcg cgcaggaagc gatcgccctc
     1261 ggcgatgcgc cgaccgcagg ccaacgccag cgccagcgcc atctcggcca cggccagcga
     1321 cagcacgtcg ggcgtggtcg tcacggcaat gccgcggcgc tgcgcctcgg tcagatcgac
     1381 agcatcgact ccgaccccgt tcaccgcgat caggcgcaga cggggcaatt tcgccatctg
     1441 cgtggccgac agcccgatat tgcctgccgt caggacgatt tcggcatcgc ccgccacgtc
     1501 gatgtcgtgc acgacatcgt aatccgcgcg cagcctttcg gccatgtcct gcggcttcag
     1561 atcggccagc gccagaacgg gggggcggct catgcgatct ggcccaggaa ggtctgcaag
     1621 cgttcgttct gtggattgcc gaagaattca ttgggcgcgt tttcctcgac gatgacgccc
     1681 ttgtccatga agatcacccg gtc
//
LOCUS       DTVW01001220            1956 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_270361, whole
            genome shotgun sequence.
ACCESSION   DTVW01001220 DTVW01000000
VERSION     DTVW01001220.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1956)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1956)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1956
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_270361"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..428)
                     /locus_tag="EYO87_16260"
     CDS             complement(<1..428)
                     /locus_tag="EYO87_16260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007815266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HIC67511.1"
                     /translation="MIIKPYDLTDAVTYHIGTFPPSALDYEVLLGPLEEAAASLARYD
                     TKMSGMVNSELFLAPLRRQDAVTSSRMEGTISTIEELYRLEAEEDAGSTDPYREARND
                     DVETYLYSRALRNAQQALAEGAPLGEHLIRTAHQQLLSFGR"
     gene            complement(718..1098)
                     /locus_tag="EYO87_16265"
     CDS             complement(718..1098)
                     /locus_tag="EYO87_16265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011910680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XRE family transcriptional regulator"
                     /protein_id="HIC67512.1"
                     /translation="MRIKMGTSVPKMGTTVHLDADQAAYRKAIADTLRRELGPTHQAI
                     KTVMRWTGASERTAKYWLSGERGPSGEHLIRLAQHSDAVLITILTMAERLSEKPRQHR
                     CAGCPARDLVLQNLGQEWKLSEGS"
     gene            1276..>1956
                     /locus_tag="EYO87_16270"
     CDS             1276..>1956
                     /locus_tag="EYO87_16270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009519802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HIC67513.1"
                     /translation="MRRAAEYVRMSTDHQKYSTENQSDAIRKYAEERGFELVRSYADA
                     GKSGLRIEGREALQQLIQDVQDGTADFEVILVYDVSRWGRFQDADESAYYEYICRRAN
                     KQVEYCAEQFENDGGPVATIVKSVKRAMAGEYSRELSNKVFIGQCRLIERGFRQGGAA
                     GFGLRRVLLDERGEVKAELKRGEHKSLQTDRVILVPGPDAEVRTVRWIYSRFLKHGRS
                     ESEIAAELN"
BASE COUNT          392 a          567 c          619 g          378 t
ORIGIN      
        1 cgtccaaagg acagcagctg ttggtgggcg gtccggatca ggtgttcgcc aagcggggcg
       61 ccctcggcga gggcctgctg ggcattccgc agtgcgcggg agtaaaggta ggtctcgacg
      121 tcgtcgttgc gcgcttcccg gtaggggtcg gtgctacccg catcttcctc ggcctccagc
      181 cggtacagtt cctcgatggt cgagatcgtc ccctccatcc tggaagacgt taccgcgtcc
      241 tggcgacgca ggggggcgag gaacaactcg ctgttcacca tgcctgacat cttggtgtcg
      301 taccgcgcga gggaggcggc tgcctcctcg agcggtccga gcagcacctc gtagtcgagg
      361 gcggacgggg gaaaggtgcc gatgtgatag gtgacggcat ccgtaagatc gtaaggcttg
      421 atgatcatag ttgtgccgat tctgtcatca acggggtttg acgccagcct agtcacgaca
      481 agtgcgcttg gcaacagaat atggctccat tctgacatca aggggcgttg tcgccagcag
      541 tctgccgtca aaccagattg gtgacagaga ttggcagcaa aatggtatca aagaatgatc
      601 ccctgtcatt cgccgcaact catgcggaga atgggggttc taatctccgc atgaacattg
      661 tggcggcttg tttcctgaac gaccgggcgg ggtggcgtcc ggccgctcca ttgcgtgtca
      721 ggaaccctcg gacaatttcc attcctgtcc gaggttctgc aacaccaggt cgcgcgcggg
      781 gcaaccggca catctgtgct gccgcggctt ctccgacagt cgctcggcca tggtcaggat
      841 ggtgatcaac accgcatcgg aatgctgcgc gagccggatc agatgctccc cgctcggccc
      901 gcgttcgcca gacaaccagt acttggccgt ccgttcactc gctccggtcc agcgcatcac
      961 tgtcttgatg gcctgatgtg tgggccccag ttcgcgccgc agggtgtcgg caatggcctt
     1021 gcgataggcg gcctgatccg cgtccaggtg cacagttgtg cccattttcg gcacagatgt
     1081 gcccatcttg atccgcatcg cggcgtcctc ctccggtaaa cctgtgggga agacaacaca
     1141 gcggcagatt ccattttgcg ccccagccaa taccccgggt ccgaccagac ggagacgcct
     1201 gcatgaactg atctggagac gggaatggca ggcagagagc caccctcaac aaaagaaccg
     1261 gcgaactctc cgccaatgcg ccgtgcggcc gaatatgtcc gcatgtccac ggaccatcag
     1321 aaatactcga cggaaaacca gtcggatgcg atccgcaaat acgcggagga acgcggcttt
     1381 gaattggtcc gttcctatgc tgatgctgga aagagtggtt tgaggatcga ggggcgcgaa
     1441 gcgctgcaac agttgatcca ggatgtgcag gacggcaccg cggatttcga ggtgatcctt
     1501 gtctatgacg tcagccggtg gggccggttt caggatgccg atgaatccgc ctattacgaa
     1561 tacatctgcc gtcgcgcaaa caagcaggtc gaatactgcg ccgagcaatt cgaaaatgac
     1621 ggcggcccgg ttgccacgat cgtcaagagc gtcaagcgcg cgatggcggg agaatacagc
     1681 cgggaacttt ccaacaaagt cttcatcggg cagtgccgcc tgatcgaacg cggcttccgt
     1741 cagggcggcg cggcgggttt tggccttcgc cgtgtcctgc ttgacgaacg cggtgaggtg
     1801 aaggccgagc tgaagcgtgg tgagcacaag agcttgcaga cagaccgggt gatcctggtt
     1861 cccgggccag acgccgaggt aagaaccgtc cgctggatct acagccggtt cctcaagcac
     1921 ggccgttcgg aaagcgaaat cgcggccgaa ctgaac
//
LOCUS       DTVW01001221            1370 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_272656, whole
            genome shotgun sequence.
ACCESSION   DTVW01001221 DTVW01000000
VERSION     DTVW01001221.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1370)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1370)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1370
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_272656"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            21..905
                     /locus_tag="EYO87_16275"
     CDS             21..905
                     /locus_tag="EYO87_16275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009505903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HIC67514.1"
                     /translation="MEGNEARQFENSAQGVRALQKWLDTMDVTRIVYEATGPYHRRLE
                     TALSGKFPLVKVNPLQARRFAQAVGTHAKTDAVDARCLARMGAALGLEPDEPVSENLR
                     DLRDLQTARAALIKERGRLRNRRLILTSALLKRQTNARLTLVERQLGELDAEIARRIA
                     EDTTSARKRDILSSIPGIGQIAAAAILTFFPEIGTLGRKQAGSLAGLVPHNRESGQWK
                     GKSFISGGRKPLRDALYMPALVGMRFNRDLKAKYLQLREAGKPAKIALVALMRKLIEI
                     ANALVKADRFWAEKPACA"
     gene            complement(1034..1331)
                     /locus_tag="EYO87_16280"
                     /pseudo
     CDS             complement(1034..1331)
                     /locus_tag="EYO87_16280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007792467.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS256 family transposase"
BASE COUNT          255 a          457 c          430 g          228 t
ORIGIN      
        1 cccacctcga tgcaatcgat ctggagggga atgaggcgag gcagttcgag aattcggcac
       61 agggtgtgcg cgccctgcag aaatggctgg acacaatgga cgtgacgcgc atcgtgtacg
      121 aggcgacagg gccttatcat cgtcggctgg agacggctct ctcgggcaag ttcccgctcg
      181 tgaaggtcaa ccctctgcag gcgcggcgct tcgcgcaggc cgtcggaacg catgccaaga
      241 ccgatgcggt ggatgcccgc tgtctggcgc gcatgggggc cgcgttgggc ctggaacccg
      301 acgagcccgt ttcggaaaac ttgcgcgatc ttcgtgactt gcagacggca cgagccgcgc
      361 tgatcaagga gcggggccgt ctgcgcaatc gccgcctgat cctgaccagt gccctgctga
      421 agcgtcagac gaatgcacgc ctcaccctgg tcgaacggca gctcggcgaa ctcgacgccg
      481 agatcgcacg gcgcattgcc gaggacacga cgagcgcacg caagcgcgac atcctcagct
      541 cgatccccgg aatcgggcag attgccgccg ctgccattct caccttcttc ccggaaatcg
      601 gcacgctggg ccgaaagcag gccgggagtc tggccgggct ggttccacat aacagggagt
      661 cgggccaatg gaagggcaag tccttcatca gcggcggacg aaagccgctg cgcgatgcgc
      721 tctacatgcc tgctctcgtc ggcatgcggt tcaaccggga tctcaaggcc aagtatctgc
      781 agctgcgcga agccggaaaa cccgcgaaaa tcgcgctcgt cgcgctcatg cggaagctga
      841 tcgagatcgc gaacgccctg gtcaaagccg accgcttctg ggccgagaaa cccgcttgcg
      901 catgacggat actcaatagc cgcaatcacc cgaccgcgaa ggtcgccgct caggctcctc
      961 gtcatcttcg ccccctggca aatcaccggc gtcagtgaat cggacaaacc gaccgcgtga
     1021 atcccaaaac cgactctgcg gcgcgccgag gctcaaggaa cgacgggaag tagctgcccg
     1081 tgcgcaactt cgggatgcgc agctccacgt tcccggcgcg agtctgccgt cgacggatac
     1141 gtcgaccggt cgcggtcgcc gttcctctgc gccaggcgtt cggggctctt ctcgcgatag
     1201 gcggcgccgg tctggccgcc cacctcgcgt tccatcagcc gcccggcggc gaagccgatc
     1261 atctcgcgca gcagatccgc atcgccgatc ttctctacga gctctctcag gtccatcacg
     1321 ggtttggtca tcggggtcat ccctcggttc aggttggccg tcgcaacccg
//
LOCUS       DTVW01001222            1618 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_276012, whole
            genome shotgun sequence.
ACCESSION   DTVW01001222 DTVW01000000
VERSION     DTVW01001222.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1618)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1618)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1618
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_276012"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..568)
                     /locus_tag="EYO87_16285"
     CDS             complement(<1..568)
                     /locus_tag="EYO87_16285"
                     /inference="COORDINATES: protein motif:HMM:PF00389.28"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-2-hydroxyacid dehydrogenase family protein"
                     /protein_id="HIC67515.1"
                     /translation="MKVHILDDWYDSLRGLPSFGLLAGHEVTIWTDRAADDEVLARRL
                     SDADAVVLFRDRTAVTASLAARLQGGPRLIAMRGQHGHVNADALTRAGILFCARKARD
                     GASRSTAELTMGLVIAGLRYLPDQIASARAGHWQGAAPLGRNVAGQRLGLYGYGGIAK
                     LVAGFARAMGMEVRFWASDQGRDRAAADG"
     gene            complement(565..>1618)
                     /locus_tag="EYO87_16290"
     CDS             complement(565..>1618)
                     /locus_tag="EYO87_16290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HIC67516.1"
                     /translation="LGAADADAAAPCRDLGDRIGALMATTLPARGLFHGDAFSLGIAG
                     GFSTALARSLFAEADLVLAFGCSLTQHNLDKGKLFPKARIVQIDTAPRAVSQGMVAAE
                     RHLRSDARLAAQALARRASPRQGWRSADLADAIATTPADTATFPAQPGLLDPRDVVSV
                     LDKVLPMDWQMVNSSGHCSFFFAQMDRPWDRFLTIREFGAIGNGIAYAMGVAAARPGE
                     RIVLLDGDGSVLMHIQELETLRRHGLDILICVLNDGAYGSEIHKLRHEGLSDAGAVFG
                     RTDLAAIARGFGIAGYRVDDLSALPGIVERFAARRGPMLIDVPVSDMVASPVIRRAHP
                     DGHSGTEHPVAIEAFL"
BASE COUNT          281 a          572 c          543 g          222 t
ORIGIN      
        1 cgccatcggc ggcggcgcgg tcgcggccct gatcggatgc ccagaaccgc acttccatgc
       61 ccattgcgcg ggcaaagccc gcaaccagtt tcgcgatccc gccatagccg taaagcccca
      121 gtctctggcc cgcgacgttg cggcccagcg gcgcggcgcc ctgccaatgc ccggcccggg
      181 ccgaggcgat ctggtcgggc agataacgca gccccgcgat caccagcccc atggtcagtt
      241 ccgccgtgga tcgcgatgcc ccgtcgcgtg cctttcgggc gcagaacagg atgccggcgc
      301 gggtcagcgc atcggcattg acatggccat gctgcccccg catcgcgatc agccggggac
      361 cgccctgcag ccgggcggcc agagaggcgg tcaccgccgt ccggtcgcga aacagcacga
      421 ccgcatcggc atccgacagg cgccgggcca gaacctcgtc atcggcggcg cggtcggtcc
      481 agatcgtgac ctcgtggccg gccagcagcc cgaacgaggg caagccgcgc aggctgtcat
      541 accagtcgtc aagaatatgg accttcacag gaatgcctcg atcgcgacag ggtgttcggt
      601 tccgctatgg ccgtcgggat gggcgcgccg gatgaccggc gatgccacca tgtcggatac
      661 cggaacgtcg atcagcatcg gtccgcgccg ggcggcaaac cgctcgacga tgccgggcag
      721 cgccgacagg tcgtcgacac ggtatcccgc gatgccgaaa ccgcgcgcta tcgcggccag
      781 atcggtccgg ccgaagaccg cgccggcatc cgacagaccc tcgtggcgca gcttgtggat
      841 ctcggatccg taggcaccgt cgttcagcac gcagatcagg atatccaggc cgtggcggcg
      901 gagtgtctcc aactcctgaa tgtgcatcag caccgatccg tccccgtcga gcaggacgat
      961 cctttcgccc ggccgcgcgg cggcaacgcc catcgcatag gcgatgccgt tgccgatcgc
     1021 gccgaattcg cggatggtca gaaagcggtc ccagggccga tccatctgcg cgaagaagaa
     1081 cgaacaatgg cccgatgaat tgaccatctg ccagtccatc ggcaacacct tgtccagcac
     1141 cgagaccaca tcgcgcggat ccagcaggcc cggctgggcc gggaatgtcg cggtatcggc
     1201 cggcgtcgtc gcgatggcat cggccaagtc cgcgctgcgc cagccctgcc gtggcgaggc
     1261 gcggcgcgcc agcgcctgcg ccgccagccg cgcatccgat cgcagatgcc gttcggcagc
     1321 caccatgccc tgactgaccg cgcggggcgc ggtgtcgatc tgcacgatgc gggccttggg
     1381 gaacagcttg cccttgtcca ggttgtgctg ggtcaggctg catccgaaag ccaggaccag
     1441 atcggcctcg gcaaacagcg atcgggccag cgcggtcgag aagccgcccg caatgcccag
     1501 cgagaaggca tcgccgtgaa acaggccgcg cgcgggcagg gtcgtggcca tcagcgcgcc
     1561 gatccggtcg cccagatcgc ggcagggtgc ggcggcatcg gcatcggcgg caccaaga
//
LOCUS       DTVW01001223            1321 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_284079, whole
            genome shotgun sequence.
ACCESSION   DTVW01001223 DTVW01000000
VERSION     DTVW01001223.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1321)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1321)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1321
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_284079"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..168
                     /locus_tag="EYO87_16295"
     CDS             <1..168
                     /locus_tag="EYO87_16295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010391857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="paraquat-inducible membrane protein A"
                     /protein_id="HIC67517.1"
                     /translation="AILSALVQLGFVASIHPGPAAASFALSVAFTMLSAQSFDPRLIW
                     RGLPLRSRTED"
     gene            190..>1321
                     /locus_tag="EYO87_16300"
     CDS             190..>1321
                     /locus_tag="EYO87_16300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MCE family protein"
                     /protein_id="HIC67518.1"
                     /translation="MSDTPPPKPASPVRKTAVRAAQAGVNVIWLVPIIALVVTLAIAW
                     NAFAERGSLIEVEFADATGVTPGETVLRFREITVGQVESVSFTPDLSKVIVQIRVDKD
                     VAPYIDADADFWIVRPQVTAQGVTRLDTVLTGSFIEGYWDAQVAQPQTRFVGLVRPPL
                     IREDAKGTWVRLTTDNADGLTEGAPILFHGLEAGRMENLRLDESGQKVIVDAFIEAPY
                     DERLTTQTVFWDTSGFSLSLGTSGLAFNVNSLSSLLQGGVAFDTLVSGGQPIGRDQVY
                     AIQADEDAARNAVFTGEDDNLLRLSILVGDSVRGLQTGAEVQYEGLRVGQVTDLAIDV
                     SKDPSGTTAVRQRVNIAISPARMGLPDGTTADQTLAFLQDAVA"
BASE COUNT          214 a          427 c          440 g          240 t
ORIGIN      
        1 gcgatcctgt cggcgctggt gcagcttggt tttgtcgcct cgatccatcc cggtcctgcc
       61 gctgcgtctt tcgcgctgtc tgttgcgttt acaatgcttt ccgcgcaaag tttcgatcca
      121 agactgatct ggcgcggatt gccgctgcgc agccggaccg aagactgacg ggcagggaag
      181 caacagggaa tgagtgatac gccgccgccg aaaccggcct ctccggtgcg caagaccgcg
      241 gtccgtgcgg cgcaggccgg cgtgaacgtg atctggctgg tgccgatcat cgcgctggtg
      301 gtcacgctgg ccatcgcctg gaatgccttt gccgaacgcg gtagcctgat cgaggtcgaa
      361 ttcgccgatg ccaccggcgt gacccccggc gagacggtcc tgcgctttcg cgagatcacc
      421 gtcgggcagg tggaatccgt cagttttacc cctgacttgt cgaaggtcat cgtccagatt
      481 cgcgtggaca aggacgtggc accctatatc gacgccgatg ccgacttctg gatcgtgcgc
      541 ccgcaggtca ccgcgcaggg ggtgacgcgg ctcgacacgg ttctgaccgg ctcgttcatc
      601 gagggatact gggatgcgca ggtcgctcag ccgcagaccc gtttcgtggg cctggtccgg
      661 ccgccgctga tccgcgagga cgccaagggc acctgggtcc ggctgacgac cgacaatgcc
      721 gacgggctga ccgagggcgc gccgatcctt ttccacgggc tcgaggccgg tcgcatggaa
      781 aacctgcggc tggacgaaag cggtcagaag gtgatcgtgg acgccttcat cgaggccccg
      841 tatgacgaaa ggctgacgac ccagaccgta ttctgggaca cttccggctt ttcgctgtcg
      901 ctgggaacca gcggactggc cttcaacgtc aattcgctgt cctcgctgtt gcagggcggg
      961 gttgccttcg acactctggt cagtggaggc cagccgatcg ggcgcgacca ggtctatgcg
     1021 atccaggccg atgaggacgc ggcgcgcaat gccgtgttca ccggcgagga cgacaacctg
     1081 ctgcggctga gcatcctcgt gggcgattcc gtgcgcgggc tgcagaccgg cgccgaggtc
     1141 cagtacgaag gtctccgcgt cggccaggtc accgatctgg ccatcgatgt cagcaaggat
     1201 ccctcgggca cgaccgccgt gcgccagcgc gtcaatatcg ccatctcgcc ggcgcggatg
     1261 ggcctgcccg acggcaccac cgccgaccag acgctggcct tcctgcagga cgccgtggcc
     1321 a
//
LOCUS       DTVW01001224            2439 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_290119, whole
            genome shotgun sequence.
ACCESSION   DTVW01001224 DTVW01000000
VERSION     DTVW01001224.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2439)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2439)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2439
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_290119"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..374)
                     /gene="rplK"
                     /locus_tag="EYO87_16305"
     CDS             complement(<1..374)
                     /gene="rplK"
                     /locus_tag="EYO87_16305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010398993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="HIC67519.1"
                     /translation="MAKKVVGQLKLQIKAGQANPSPPVGPALGQRGINIMAFCKEFNA
                     RTQEMEQGSPVPVVITYYADKSFTFETKTPPASFLLKKAAGLKPVGKRNRPKGSDKPG
                     RASAGTVTVKQVREIAEAKMKDL"
     gene            complement(481..1017)
                     /gene="nusG"
                     /locus_tag="EYO87_16310"
     CDS             complement(481..1017)
                     /gene="nusG"
                     /locus_tag="EYO87_16310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_351750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusG"
                     /protein_id="HIC67520.1"
                     /translation="MAKRWYSVSVLSNFEKKVAEAIRQSVSEKGLEDEIDEVLVPTEQ
                     VIEIRRGKKVTSERRFMPGYVLVHMDMSDRTYHLVNSINRVTGFLGAQGKPMPMRDDE
                     VNMMLNRTGEGEPVAPRNLIRFDVGEKVNVTDGPFEGFSGMVEEVDEAASRIKVMVSI
                     FGRPTPVELEFTQVAKTA"
     gene            complement(1191..1688)
                     /gene="secE"
                     /locus_tag="EYO87_16315"
     CDS             complement(1191..1688)
                     /gene="secE"
                     /locus_tag="EYO87_16315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009805836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecE"
                     /protein_id="HIC67521.1"
                     /translation="MVGCGLSRLSGCDRAFRHDAGPAPDRAPGAGIASARRRRCRPAR
                     GHPGRRPAARRRLRRGLRAIGGDDEGHIPVALGCVLAGLKRRRIGDTSAAENPKEPFV
                     ANPVQFINQVRAEAAKITWPTRREVITTTIMVMIMAALTSVFFFLVDLIIRFGLTQGL
                     QAISG"
BASE COUNT          433 a          832 c          746 g          428 t
ORIGIN      
        1 aggtccttca tcttggcctc ggcgatctcg cgcacctgct tgacggtcac ggtgccggcg
       61 ctcgcgcgac cgggcttgtc cgaacctttc gggcggttgc gcttgcccac cggcttcagt
      121 ccggcggcct tcttcagcag aaacgaggcc ggcggcgtct tcgtctcgaa ggtgaaggat
      181 ttgtcggcat aataggtgat caccacggga accggcgagc cctgttccat ttcctgcgtg
      241 cgagcgttga actctttgca gaatgccatg atgttgatgc cgcgttggcc caatgcggga
      301 ccgacgggcg gggacgggtt cgcctgaccc gccttgattt gcagcttaag ctgcccgacg
      361 actttcttgg ccatctggcc ttctccttat catcacgccc cgtccctgat tggacatccg
      421 gggccctgac ttagcggttc ggcggcgcgc cccaagggga agacagcctc ccgcgaccaa
      481 tcacgcggtc ttggcgacct gcgtgaattc cagctcgacc ggcgtgggcc ggccgaagat
      541 cgacaccatg accttgatgc gcgaggcggc ctcgtcgacc tcctcgacca ttcccgaaaa
      601 cccctcgaag ggaccatcgg tcacgttcac cttttcgccc acatcaaagc ggatcaggtt
      661 gcgcggggcg accggttcgc cctcgcccgt gcggttcagc atcatgttca cctcgtcgtc
      721 gcgcatcggc atcggcttgc cctgcgcgcc gaggaaaccg gtgacccggt tgatcgaatt
      781 gaccaggtga taggtgcgat cagacatgtc catgtgaacc aggacatagc ccggcatgaa
      841 gcggcgttcc gatgtaacct tcttgccgcg ccgaatctcg atcacctgtt cggtggggac
      901 cagaacctcg tcaatctcgt cctcaagccc cttttcggac accgactggc gaatcgcctc
      961 ggcgaccttc ttttcgaagt tcgacaggac actgaccgaa taccaacgct ttgccatgtc
     1021 tcgatcgacc cctgttcgtc ctgataggga atcgcgcggc cgggccggca actccttgaa
     1081 ttcctgatat gtccgccaaa attgaaatcg gcgtgcacgc gagttcgatg cacgccgtcg
     1141 ccggacagtc gggggccaat accgctgcgg ccccgaaaat gcaagcccga tcagccgctg
     1201 atcgcctgaa gcccctgggt caggccaaag cggatgatca gatcgaccag aaagaagaac
     1261 acgctggtca gcgcggccat gatcatgacc atgatcgtcg tcgtgatcac ctcacggcgg
     1321 gtgggccagg tgatcttcgc ggcttcggcg cggacctggt tgatgaactg gacgggattg
     1381 gccacgaacg gctccttcgg gttttcagcc gccgatgtat cgccgatgcg ccgccgtttc
     1441 aaccctgcaa ggacgcatcc gagggcgaca ggaatgtgac cttcgtcatc gccgccaatc
     1501 gcgcgcaatc ctcggcgtag tcgccgccgc gcggcaggtc ggcggccggg atggccgcgc
     1561 gcaggccggc atctccggcg ccgcgcggat gcgattccag cgcccggtgc gcgatctggc
     1621 gccggtcctg catcgtgtcg gaatgcgcga tcgcacccag ataatcgcga taggccgcag
     1681 ccgaccatcc gatcctgcgc ggcgccggat cgggaatcag ccgcgcggcc tgcggcccgg
     1741 ccattcgcgc cagcaccgac ggccgcaccg agcccaggtc ctcgtggcgc cagcagacca
     1801 ggctttcgac gcccgccacc gacagaagcc tgtccgccag atcggaccag cccaggcgtg
     1861 cgcaatccag ccccgccaga taatcgccga tccgcgcctg ccggcccatt cgcaattcct
     1921 cgccaaaggc cgaaatcagg aaatcggcgg gttcgcgcac ggccagaaac agcctgatgc
     1981 cagaaccgtc catcagcccg accaggtttt caagccgcgc ctgggcaagg ggataaagct
     2041 gcccccgggg cgcaaacagc cgtgccggcg tggtgtcgcc cagaatcagc tcatcggaca
     2101 gaatcagccg gccagccgat gcgctctcct gccgcagcgc cctggcggcc tgccgcgcct
     2161 tccatggcgt ccgcccgcaa tcgtccagca ggcgccgaag atcggtcgga ccggcgcgca
     2221 accggcgcgg ccccatccag ccgatcccct gacgcgccaa ttgcggcgcg gcacgatcga
     2281 aagcggtctg aagatgcgtg gttgcggtct tgtgcgcgcc cagatgaagg cagagattca
     2341 tcgcagccgc cgggcggtta ttccgacgac gggcctggca ggggcagggg gactcgaacc
     2401 cacgaccctc ggttttggag accgatgctc taccaactg
//
LOCUS       DTVW01001225            1222 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_29553, whole
            genome shotgun sequence.
ACCESSION   DTVW01001225 DTVW01000000
VERSION     DTVW01001225.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1222)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1222)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1222
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_29553"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..977
                     /locus_tag="EYO87_16320"
     CDS             <1..977
                     /locus_tag="EYO87_16320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_355284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="major capsid protein"
                     /protein_id="HIC67522.1"
                     /translation="EMTQAINILPNLYTRLAQIGLFRFEGVSQRSVIIEQYEGVLSLL
                     PSVPLGGPATVGTREGRSMRSFALPWIPHDDVVLPADIQGAPALGTFDAADPLVEVMN
                     RKLLLMRRKHAQTREYMEMNALRGIVKDGAGTTLYNYFTEFGLAQISVDFVLGTAGTN
                     VQGKVREVLRAIEDNLLGEAMTSVHALVSREFFDKLIAHPKTEEAYKFYASTGAQPLR
                     EDVRRNFPFGGILFEEYSGTVTLSTKATERLVPANEGIAFPLGTMDTFTTYGGPANLL
                     ETANTIGLPLYARQHLDEKGRWIDVMTEASILPVNKRPRLAVRIHSSN"
     gene            990..>1222
                     /locus_tag="EYO87_16325"
     CDS             990..>1222
                     /locus_tag="EYO87_16325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67523.1"
                     /translation="MSVFAAAMDRIFTHSSMAAPALWISAATSEERPIRIIRRAPDRV
                     TGFGAGRFVSDTTLVDVRVADLPAPRPGDVIVIG"
BASE COUNT          205 a          463 c          358 g          196 t
ORIGIN      
        1 ccgagatgac gcaggccatc aacatcctgc ccaacctcta cacgcgcctc gcccagatcg
       61 gcctcttccg cttcgaaggg gtcagccagc gctcggtcat catcgagcag tacgaaggcg
      121 tcctgagcct cctgccttcc gtccccctcg gcggacccgc cacggtcggc acccgcgagg
      181 ggcggtccat gcggtccttc gccttgccgt ggatcccgca tgacgacgtg gtcctgcctg
      241 ccgacatcca aggcgccccc gcgctgggca ccttcgacgc cgccgatccg cttgtcgagg
      301 tgatgaaccg caagctcctg ctgatgcggc gcaagcatgc ccagacccgc gagtacatgg
      361 agatgaacgc gctgcgcggc atcgtgaagg atggggccgg gacgaccctc tacaactact
      421 tcaccgaatt cggcctggcg cagatctcgg tcgacttcgt gctgggcacg gccggaacga
      481 acgtgcaggg caaggtgcgc gaagtgctgc gcgccatcga ggacaatctg ctgggcgaag
      541 ccatgacctc ggtccatgcc ctcgtcagcc gcgagttctt cgacaagctg atcgcccacc
      601 ccaagaccga agaggcctac aagttctatg cctcgaccgg cgcccagccc ctgcgcgagg
      661 atgtccgccg caacttcccc ttcggcggca tcctcttcga ggaatactcc ggcacggtca
      721 ccctctcgac caaggccact gaacggctgg tcccggcgaa cgaggggatc gctttcccgc
      781 tcggcacgat ggacaccttc accacctatg gcggcccggc gaacctcctg gaaaccgcca
      841 acaccatcgg cctgccgctc tacgcccgac agcatctcga cgagaagggc cgctggatcg
      901 acgtgatgac cgaggcctcg atcctgccgg tcaacaagcg gccgcgcctc gccgtccgga
      961 tccacagttc caactgacgg acgcagccca tgtccgtctt tgccgccgcc atggaccgca
     1021 tcttcaccca ttcctccatg gcggccccgg ccctctggat ctcggccgcc acctccgagg
     1081 aacgcccgat ccgcatcatc cgccgcgcgc ccgaccgcgt caccggcttt ggcgcgggcc
     1141 ggttcgtcag cgacacgacg ctggtggatg tgcgcgtggc cgacctgccc gccccgcgcc
     1201 cgggcgatgt gatcgtcatc gg
//
LOCUS       DTVW01001226            1044 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_309060, whole
            genome shotgun sequence.
ACCESSION   DTVW01001226 DTVW01000000
VERSION     DTVW01001226.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1044)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1044)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1044
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_309060"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..365)
                     /locus_tag="EYO87_16330"
     CDS             complement(<1..365)
                     /locus_tag="EYO87_16330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011692959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67524.1"
                     /translation="MLATGTQTTPLPDAPVTQETTAEWQEIALSVAPFLDGVQQELAG
                     QVAAFDPEIAPYAEYALANQGKQLRATLTGLAANCAGGWNNSAVKAAVIIEMVHLATL
                     LHDDIMDGAEFRRNRPTLAR"
     gene            complement(400..891)
                     /locus_tag="EYO87_16335"
     CDS             complement(400..891)
                     /locus_tag="EYO87_16335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015352091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase"
                     /protein_id="HIC67525.1"
                     /translation="MAALPFKAIAAMSLNRVIGSDNTIPWHLPEDFAWFKQTTMGHVL
                     VMGRKTFESIGRPLPGRETIVLTRRADSVSGVRTIGSLDALGQTDDLGDRTVFICGGA
                     QVYAQALGQCSDLFLSVVKREVEGDAFFPEFELMFDAGERLRESDDFDIIHYRRLGQA
                     GGD"
     gene            complement(895..>1044)
                     /locus_tag="EYO87_16340"
     CDS             complement(895..>1044)
                     /locus_tag="EYO87_16340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014033258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidylate synthase"
                     /protein_id="HIC67526.1"
                     /translation="AKLQLAREPRPLPKMVINPDVKDIYSFRFDDYELQNYDPHPSIK
                     APIAV"
BASE COUNT          193 a          335 c          327 g          189 t
ORIGIN      
        1 cgggcgagcg tcgggcggtt gcgccgaaac tcggcgccgt ccatgatgtc gtcgtgcagc
       61 agggtggcca ggtgcaccat ctcgatgatc accgcagcct tgacggcgga attgttccag
      121 ccgccggcgc aattcgccgc caggccagtc agcgtggcgc gcaactgctt gccctggttg
      181 gccagagcgt actccgcgta cggcgcgatc tccggatcga acgccgcgac ctgaccggcc
      241 aattcctgct gaaccccgtc gaggaacggc gccaccgaca gggcgatttc ttgccattcg
      301 gcggttgtct cctgagtgac gggggcgtcc ggaagcgggg tcgtctgggt tccggttgct
      361 aacattccgg gcaaaagcta ccgattggcc aaggccaagt caatcgccgc ccgcctggcc
      421 aagccggcgg tagtggatga tgtcgaagtc gtccgactcg cggagccgtt ccccggcgtc
      481 aaacatcagc tcgaactccg ggaaaaaggc gtcgccctcc acttcgcgct tcaccacgga
      541 gagaaacaga tcggaacatt ggccaagcgc ctgggcataa acctgcgcgc caccgcagat
      601 gaaaaccgtt cggtcgccga gatcgtccgt ttggccaagc gcgtcgagac tgccgatcgt
      661 gcggacgccg gagaccgagt cggcgcgtcg cgttagcacg atcgtttcgc ggcccggcaa
      721 cgggcgaccg atcgactcga acgtcttgcg ccccatcacc agcacgtgcc ccatcgttgt
      781 ctgcttgaac cacgcgaagt cctccggcaa atgccacggg atcgtgttgt cggagccgat
      841 cacccggttc agcgacatcg ccgcgatggc tttaaagggc agggcagcca tcattcaaac
      901 ggcgatcggc gccttgatcg acggatgcgg gtcgtagttt tgcaactcgt agtcgtcgaa
      961 gcgaaacgag taaatgtctt tcacatccgg attgatcacc atcttcggca gcggccttgg
     1021 ctcgcgcgcc agttgcagct tggc
//
LOCUS       DTVW01001227            3830 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_318969, whole
            genome shotgun sequence.
ACCESSION   DTVW01001227 DTVW01000000
VERSION     DTVW01001227.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3830)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3830)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3830
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_318969"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            136..618
                     /locus_tag="EYO87_16345"
     CDS             136..618
                     /locus_tag="EYO87_16345"
                     /inference="COORDINATES: protein motif:HMM:PF03724.14"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="META domain-containing protein"
                     /protein_id="HIC67527.1"
                     /translation="MSRPARRFALVGALTFAGVALAACAPATAPGGSAPGEDRGFIPG
                     GSYVLVGMDGKTVPLRNVTLVVEENRLSGQAPCNGYSATNNAELPAIALSPIVATKVA
                     CKDMKLETRFLSVLQQANSADFYGGVLRVKSPSTWLIFERGMRDTSGVSALEQARGTQ
                     "
     gene            complement(612..1361)
                     /gene="recO"
                     /locus_tag="EYO87_16350"
     CDS             complement(612..1361)
                     /gene="recO"
                     /locus_tag="EYO87_16350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011749112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecO"
                     /protein_id="HIC67528.1"
                     /translation="MEWQAEGTVLARRPHGESAVILDVLTARHGRHAGLVPGGVSRTR
                     AAMLQPGARLDLRWRARRDDQLGHFAVEPVRLRAGIMGDPLALAGLNAICALLVFALP
                     ERDPHPDLFFRTEALLDAIETGSDWGVAYLQWEMRLLDEMGFGLDLSSCAVTGATEGL
                     AYVSPRSGRAVSLAGAGEWADRLLPLPPLLGRTGDDRPEGRARGLTQGLAITGHFLRS
                     RIAAELVGRPLPAARDRLVTRLLPPPGGTDY"
     gene            complement(1371..1811)
                     /locus_tag="EYO87_16355"
     CDS             complement(1371..1811)
                     /locus_tag="EYO87_16355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009806790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HIC67529.1"
                     /translation="MTLPRQRVTLITLGVTDLDRSAAFYADWGWTPHPASQEGVLFFQ
                     MNGAVLALFGRSDLAADQGRPDADLGTGAITLAQNCSDDAETDAVFQAALAAGAGCLK
                     MPEKVFWGGYSGYFADPDGHVWEIATNPFWPLAEDGGLTLPQPG"
     gene            complement(1906..2823)
                     /gene="rarD"
                     /locus_tag="EYO87_16360"
     CDS             complement(1906..2823)
                     /gene="rarD"
                     /locus_tag="EYO87_16360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014876203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter RarD"
                     /protein_id="HIC67530.1"
                     /translation="MGRSSNIDSPQGFTYALAAYLSWGLLPIYMKALAHLPAIDVIAH
                     RILWSLPIAAAVLIWQRRTGDLGVALRDPRLLAMAGVTAVLISINWLTYVWAVGNGHA
                     LDAALGYYINPLFSVALGAALLGERLNRLKWIAIGLAFAAVVVLSMKAGRLPLTAVVL
                     TLSWGLYAYCKKSLPLGPNQGFTLEVMLLSPLALAWLVWRSAQGGAFFGTGTGLDMLL
                     LLGCGPVTAIPLLFYANGAKLLRLSTIGILQYITPTMIFLVAVLLFGESFGIARMIAF
                     PMIWIALAVYTLSLLREAGDRRRARLRGV"
     gene            complement(2915..3250)
                     /locus_tag="EYO87_16365"
     CDS             complement(2915..3250)
                     /locus_tag="EYO87_16365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011746764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1491 family protein"
                     /protein_id="HIC67531.1"
                     /translation="MPEPRLAAGIWVSAYLARLGLANIPAYVIAHGDDTAGAVLVKCV
                     RPDGSARLYAREWDFDTDTRPWQLTGEGPEARIDETIRRQRGFDPDLWVIEIESRDGR
                     TLLDEVGLD"
     gene            complement(3250..>3830)
                     /gene="era"
                     /locus_tag="EYO87_16370"
     CDS             complement(3250..>3830)
                     /gene="era"
                     /locus_tag="EYO87_16370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005793992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="GTPase Era"
                     /protein_id="HIC67532.1"
                     /translation="EVRTPVALIINKIDRVKAEALLALSQRLNAEFGFERTFMISAER
                     GHGCDDLRDWLATTLPAGPWLYPEDQIADLPMRMIAAEITREKLTLRLHEEIPYQLTV
                     ETEGWEEKKDGSARVDQVIYVARQGHKGIVLGKRGETIKAVGQAARAEMEEFMDRRVH
                     LFLQVRVRENWQDEAERYGEMGLDFRDGDPGR"
BASE COUNT          699 a         1322 c         1219 g          590 t
ORIGIN      
        1 ttcgagggcg cggccgaaat acaggcccag gtcatcgcga gacggctttt gaccccggcc
       61 gtttcaggct agacttcgga aaccaaagcg gtttcgaagc gttcgtttcc gattccggcc
      121 cgaaggagat cgcccatgtc ccgtcccgcc cgccgtttcg cccttgtcgg cgccctgaca
      181 ttcgccggtg tggcgcttgc cgcctgcgcg ccggccaccg cgcccggcgg gtccgcgccg
      241 ggcgaggatc gcggtttcat tcccggtggc agctatgtgc tggtcggcat ggatggcaag
      301 accgtgccgc tgcgcaacgt gacgctggtg gttgaagaga accggctctc cggccaggcg
      361 ccctgcaacg gctattcggc cacgaacaat gcggaattgc ccgcgattgc gctgtcgccg
      421 atcgtggcga cgaaggtggc ttgcaaggac atgaagctgg aaacccgttt cctttcggtg
      481 ctgcaacagg cgaattcggc cgatttctac ggcggcgtgc tgcgggtcaa gtctccttcg
      541 acctggctga tattcgaacg cgggatgcgc gacaccagcg gcgtcagcgc actggaacag
      601 gcacgcggca ctcagtaatc cgtgccaccc ggtggcggca gcaggcgcgt gacaagccgg
      661 tcgcgcgcgg cgggcagcgg ccgccccacc agttcggcgg caattcggct gcgcaggaag
      721 tgaccggtaa tggccaggcc ctgcgtcagc ccccgcgccc ggccttcggg ccggtcgtcg
      781 cccgtccggc ccagaagcgg cggcagcggc aacaaccggt cggcccattc ccccgcgccg
      841 gcaaggctga ccgcgcggcc cgaacgcggg ctgacatagg ccagcccctc ggtcgcgccg
      901 gtgaccgcgc aggatgacag gtccagcccg aaacccatct cgtcaagcag ccgcatctcc
      961 cattgcagat aagcgacgcc ccagtcagag ccggtttcga tcgcgtccag cagcgcctcg
     1021 gtccggaaga agagatcggg atggggatcg cgttcgggca gcgcgaagac cagcagcgcg
     1081 cagatcgcgt tcaggccggc cagcgccagc ggatcgccca tgatccccgc gcgcagccgc
     1141 accggctcga ccgcgaaatg gccaagctga tcgtcccggc gtgcccgcca gcgcagatcc
     1201 agccgcgccc ccggctgcag catcgccgcg cgcgtgcgcg agacgccgcc gggcacaaga
     1261 cccgcgtgcc gaccatgccg cgccgtcaac acgtcaagga tcaccgcgga ttcgccatgc
     1321 ggcctgcgcg ccagcaccgt gccctcggct tgccattcca tcgccccgtg tcagccgggc
     1381 tgcggcaggg tcagcccgcc atcttcggcc agcggccaga acggatttgt cgcgatttcc
     1441 cagacatggc cgtcgggatc ggcgaaatag ccggaatagc cgccccagaa caccttttcg
     1501 ggcattttca ggcagccggc cccggctgca agcgcggcct gaaagaccgc atccgtttcc
     1561 gcgtcatcac tgcaattctg cgccagcgtg atcgcgccgg ttcccagatc cgcatcgggg
     1621 cggccctgat cggcggcaag gtcggagcgt ccgaacagcg ccagaaccgc gccattcatc
     1681 tgaaagaaca ggacgccctc ttgcgaggcc ggatgcggcg tccagcccca atcggcataa
     1741 aaggccgccg accggtccag atcggtcacg ccaagcgtga tcagggtgac gcgctgtcgg
     1801 ggtaaggtca tggttctctc gcttggacaa ggtatcaggc tgtcacggcg ccggcgcatc
     1861 ggcaagaccc agggcaaggc cgcgtgcagg cggcgcaaga cgttttcaga cgcctcgcaa
     1921 ccgcgcgcgc cgcctgtcgc ccgcctcgcg cagcagcgac agggtataga ccgcaagcgc
     1981 gatccagatc atcgggaagg caatcatgcg cgcgatgcca aaggattccc cgaacagcag
     2041 gaccgcgaca agaaagatca tcgtcggcgt gatgtattgc aggataccga tggtggacag
     2101 gcgcagcagc ttggcgccgt tggcataaaa cagcagcggg atggcggtga ccggaccgca
     2161 gcccagcaaa agcaacatgt caaggcccgt gccggtgccg aagaacgccc cgccttgcgc
     2221 ggatcgccag accagccagg ccagggcaag cgggctcagc aacataacct ccagcgtgaa
     2281 gccctgattg ggacccagcg gcaggctttt cttgcaatag gcgtaaaggc cccagctgag
     2341 tgtcagcacc accgccgtca gtggcagccg cccggctttc atgctcagga ccacgaccgc
     2401 ggcgaaagcc agcccgatcg cgatccattt cagccggttc aaccgttcgc ccagcagcgc
     2461 cgcgccaagc gcgacgctga aaagcggatt gatgtaatag ccaagcgccg cgtcaagggc
     2521 atgaccgttt cccaccgccc agacataggt cagccagttg atcgagatca ggacagccgt
     2581 caccccggcc attgccagca gacgcggatc gcgcagcgcc acgcccagat ccccggtgcg
     2641 gcgctgccag atcagcaccg cggccgcaat gggcagggac cacaggatcc gatgcgcgat
     2701 cacgtcgatc gcgggcagat gcgccagcgc cttcatgtag atcggcagca ggccccagct
     2761 cagataggcg gccagcgcat aggtaaagcc ttgcggcgaa tcgatgttcg aggatctgcc
     2821 catgcgaatt gcatatgctg cagatcgcgg taacgccaga cgggaccgcg aggcggcccg
     2881 gttgcggacc cggcaaggca caggcgcgag ggcgtcagtc cagcccgacc tcgtccagca
     2941 gggttcttcc atcgcggctt tcgatttcga tcacccacag atcgggatcg aaaccgcgct
     3001 ggcggcggat ggtctcgtct atccgggcct cgggcccctc gccggtcaac tgccagggcc
     3061 gggtatcggt gtcgaagtcc cattcgcggg cgtaaagccg ggcgctgcca tccggacgga
     3121 cgcatttgac cagcaccgcg ccggcggtgt catcgccatg ggcaatcaca taggcgggga
     3181 tgttcgccag ccccagccgc gccagatagg cggataccca gatccccgcc gcaagcctgg
     3241 gctcgggcat cagcggcccg gatcgccgtc gcgaaaatcg aggcccatct cgccatagcg
     3301 ttcagcctcg tcctgccagt tctcgcggac gcggacctgc aggaacaggt gaacccggcg
     3361 atccatgaat tcctccatct cggcgcgggc cgcctgaccg accgccttga tcgtctcgcc
     3421 acgcttgccc agaacgatgc ccttgtgtcc ctgccgggcg acatagatca cctgatcgac
     3481 ccgcgcgctg ccgtccttct tctcctccca gccctcggtc tcgaccgtca actgataggg
     3541 aatttcctcg tgcaggcgca gggtcagctt ttcgcgcgtg atctcggccg cgatcatgcg
     3601 catcggcaga tcggcgatct ggtcctcggg atagagccac ggtccggcag gcagggtcgt
     3661 ggccagccag tcgcgaagat cgtcgcagcc atgtcccctt tcggccgaga tcatgaaggt
     3721 tcgttcaaag ccgaattccg cgttcagccg ctgcgacagg gccagcagcg cctcggcctt
     3781 gacccggtcg atcttgttga tgatcagtgc gaccggcgtc ctgacctcaa
//
LOCUS       DTVW01001228            1758 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_32213, whole
            genome shotgun sequence.
ACCESSION   DTVW01001228 DTVW01000000
VERSION     DTVW01001228.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1758)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1758)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1758
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_32213"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(100..1026)
                     /locus_tag="EYO87_16375"
     CDS             complement(100..1026)
                     /locus_tag="EYO87_16375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010393716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tol-pal system protein"
                     /protein_id="HIC67533.1"
                     /translation="MHRTLAAAGLAVLMALPLAARADQDPTLADLRAELSQVRAELQS
                     LRAQLVASGAAGFRAAGGDSAIDRMNAMETRLARLTDRTEQVQNRINGVLAESKRRMD
                     DLEFRLCEMDETCDLSALMTPDAQGEGGTGTPSALAPAAPADRGAGAAGKPATAAEQA
                     DFDAARQVMNSGDFARAAQMFGAVAEKHAGGPLTAEALFLRGAALDSAGDEHGAAAAW
                     LEGFAADPESPRAAESLLGIARVVANDDPTAACLYLAEIPARFPGTPPAVEAETRMSR
                     LACGANDLGGGDPGLSVEIDPEAMADMIEQQQ"
     gene            complement(1026..1562)
                     /gene="pal"
                     /locus_tag="EYO87_16380"
     CDS             complement(1026..1562)
                     /gene="pal"
                     /locus_tag="EYO87_16380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017927218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-associated lipoprotein Pal"
                     /protein_id="HIC67534.1"
                     /translation="MNIWMKAASAACLLLLGACTQPAPTPQQQVYDPYANNGAGAQYQ
                     GQLSGGTLGAEATADYFRTSVGDTVLFPAEQTTLTSDARATLSRQAQWLNRNTNFSAV
                     VQGHAEETGTREYNLALGARRASAVQEYLIAQGVEAGRIRTVSFGKERPLAVCSDEAC
                     YAKNRRAVTVVSDSGAGS"
     gene            complement(1596..>1758)
                     /gene="tolB"
                     /locus_tag="EYO87_16385"
     CDS             complement(1596..>1758)
                     /gene="tolB"
                     /locus_tag="EYO87_16385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999478.1"
                     /note="forms dimers; may be involved in cell envelope
                     integrity; interacts with outer membrane proteins and with
                     the C-terminal domain of inner membrane protein TolA;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Tol-Pal system protein TolB"
                     /protein_id="HIC67535.1"
                     /translation="TWAPNGRVVMFTRVTPGGNGQPRLHSVDITGRNMRPLNLDFAAS
                     DPSWGPLMP"
BASE COUNT          256 a          609 c          616 g          277 t
ORIGIN      
        1 accgccagcc cgatggcggg catgtcgccc gccagtcggt ccagcgtggc gcggatgcgg
       61 gcggctggat cggccgcggc cgatgtcacg gcgcgggact cattgttgct gctcgatcat
      121 gtcggccatt gcctcgggat cgatctcgac gctcaggccc ggatcgccgc cgcccagatc
      181 gttggcgccg caggccagcc tggacatgcg ggtttctgcc tcgaccgcgg gcggggtgcc
      241 tggaaagcgg gccggaatct cggccagata aagacaggcg gcggtcggat cgtcgttggc
      301 cacgacacgc gcgatgccca gcaggctttc ggccgcccgc gggctttcgg gatcggcggc
      361 gaagccttcc agccaggcgg cggccgcgcc atgctcatcg cccgcgctgt ccagcgccgc
      421 gccacgaagg aacagcgcct cggcggtcaa cggcccgccg gcatgttttt cggccactgc
      481 gccgaacatc tgggccgcgc gggcgaaatc gccgctgttc atgacctgcc gggcggcatc
      541 gaaatcggcc tgctcggccg ccgtggcggg cttgcccgcc gcgcctgcgc cgcgatcggc
      601 gggcgcggcc ggtgccagcg ccgagggcgt gccggtgccg ccctcgccct gcgcgtcggg
      661 cgtcatcagc gcggacagat cgcaggtctc gtccatctcg caaaggcgga attccagatc
      721 gtccatgcgc cgcttcgatt cggccagcac cccgttgatc cggttctgca cctgttcggt
      781 cctgtcggtc aaccgcgcca ggcgcgtttc catcgcgttc atgcggtcga tggccgaatc
      841 gccccctgcg gcccgaaacc cagccgcgcc cgacgcgaca agctgggcgc gaagcgactg
      901 cagctcggcg cgcacctggg acagttcggc gcgcagatcg gccagggtcg ggtcctgatc
      961 cgcccgggcg gcaagcggca gcgccatcag caccgccagg ccggctgcgg caagggtgcg
     1021 gtgcatcacg aaccggcccc gctgtcgctg accacggtca cggcgcgccg gttcttggca
     1081 tagcaggcct cgtccgaaca gaccgcgagc ggacgttcct tgccgaagct gacggtgcgg
     1141 atgcggccgg cctcgacgcc ttgcgcgatc aggtattcct gaactgcgct ggcgcggcgg
     1201 gcgccgagcg cgaggttgta ttcacgggtg ccggtttctt cggcatgacc ctgaaccacg
     1261 gccgaaaagt tggtgttccg gttcagccac tgcgcctgtc gcgacagcgt ggcgcgcgcg
     1321 tccgaggtca aggtcgtctg ttcggccggg aacagaaccg tgtcgccgac gctggtgcgg
     1381 aaataatccg ccgtcgcctc ggcgcccagc gttccacccg aaagctggcc ctgatactgc
     1441 gcgcccgccc cgttattggc atagggatca tagacctgct gctgcggtgt cggcgccggc
     1501 tgggtgcagg caccaagaag cagaaggcag gcggcagagg cggctttcat ccagatattc
     1561 atcgcgggca tcctccgggc ggcgtcgggc atggatcatg gcatcaacgg accccaagac
     1621 gggtccgagg cggcaaagtc aaggttcagc ggtcgcatgt tgcggcccgt gatatccacg
     1681 gaatgcagcc ggggctggcc gtttccgccc ggcgtcaccc gcgtgaacat cacgacgcgg
     1741 ccattggggg cccaggtc
//
LOCUS       DTVW01001229            1698 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_328403, whole
            genome shotgun sequence.
ACCESSION   DTVW01001229 DTVW01000000
VERSION     DTVW01001229.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1698)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1698)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1698
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_328403"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1125
                     /locus_tag="EYO87_16390"
     CDS             <1..1125
                     /locus_tag="EYO87_16390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007814098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS256 family transposase"
                     /protein_id="HIC67536.1"
                     /translation="AEEVLPDGRQRIVRHGYGPERSIQTGIGALDVRRPKVRDRAAGP
                     ADEKVRFSSAILPKWARRSRSLDALLPVLYLRGISTGDFREALSAILGAEAPNLSPGV
                     ISRLTGEWQQEHDRWQRRDLSARRYVYIWADGVYLQARMEPQAECMLVILGATPEGKK
                     ELVGFQIGVRESAQSWRELPVDIKARGLAVPPEIAVGDGAMGFWKALDEVFPGTRHQR
                     CWVHKIANVLNKFPKSMQPTVKADLREIWQAETRAKAKAAMDIFAEKYGIKYEKAVNC
                     LTKDRDALLAFYDFPADHWDHLRTGNPIESVFATVRHRTVRTKGALSQTTAKLMVFKL
                     VQTAAKTWRRLKGANQLPLVIEGVTFTDGVAENDTENRAA"
     gene            complement(1153..1311)
                     /locus_tag="EYO87_16395"
                     /pseudo
     CDS             complement(1153..1311)
                     /locus_tag="EYO87_16395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009819734.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
     gene            complement(1298..1543)
                     /locus_tag="EYO87_16400"
     CDS             complement(1298..1543)
                     /locus_tag="EYO87_16400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012187059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system ParD family
                     antitoxin"
                     /protein_id="HIC67537.1"
                     /translation="MGTMNISLPDPMKSWVEDQAKSGRYANSSDYVRDLIRRDRMRHD
                     AIAEIQAAVDAGIASGPAKSFDCNAFKARMHAKHAGK"
BASE COUNT          325 a          535 c          530 g          308 t
ORIGIN      
        1 gccgaagagg tcctgccgga tggccggcag cgtatcgtcc ggcatgggta tgggccggag
       61 cgaagcatcc agaccgggat cggcgcgctt gatgtgcgcc gcccgaaggt gcgagaccgc
      121 gcggccggac ctgctgacga gaaggtgcgg ttcagctccg ccatcctgcc gaaatgggcg
      181 cggcggtcgc gcagcctcga tgccctgctg ccagtcctct acctgcgcgg catttccacc
      241 ggcgacttcc gggaggcgct ctctgcgatc ttgggggcgg aggcgccaaa cctgtcgccg
      301 ggcgtaatct cgcgcctgac cggggaatgg cagcaggaac atgaccgctg gcagcgccgt
      361 gatctttcgg cgcggcggta tgtctacatc tgggcggacg gcgtctacct ccaggcccgg
      421 atggagccgc aggccgagtg catgctggtc attctgggcg ccacgcccga agggaagaag
      481 gaactggtcg gcttccagat cggcgttcgg gaaagcgcgc agagttggcg cgagttgccg
      541 gtcgacatca aggcccgcgg ccttgccgtc ccgccggaga tcgccgtggg agacggggcc
      601 atggggttct ggaaggcgct cgacgaggtc ttccccggca cgcgtcatca gcgctgttgg
      661 gtccacaaga tcgccaacgt gctgaacaag ttcccgaaat cgatgcagcc gacggtgaag
      721 gccgacctgc gcgagatatg gcaggccgag acccgcgcta aggccaaggc cgccatggac
      781 atcttcgccg agaaatatgg gatcaaatac gagaaggcgg taaactgcct gacaaaagac
      841 cgcgacgcgc tgctggcgtt ctatgacttc ccggccgacc attgggatca cctgcgcacg
      901 ggcaacccaa tcgaaagcgt cttcgccacc gtccggcaca ggaccgtccg aaccaagggg
      961 gcgctgtcgc aaacgacagc gaagctgatg gtgttcaagc tcgttcagac cgccgccaaa
     1021 acatggcgcc gcctgaaggg cgcgaaccag ttgcctttgg tcatcgaagg cgtcacattc
     1081 accgacggtg tcgccgagaa cgacaccgaa aaccgcgccg cgtgatcaag ccgcatcacc
     1141 cagatttcag catagctctg gataagctgc aagcaagtca aagagcgcga acaggccatc
     1201 tgcgtagcgc tcggcttgac tcatgtccca ttccgccgcg ccctggatcc aaatgtccgc
     1261 aagatcggct tccgctgcag gacggatggt ccatctgcta ttttccggca tgcttcgcgt
     1321 gcatccgggc cttgaacgcg ttgcagtcaa acgactttgc cgggccgctg gcgattccgg
     1381 catcaaccgc tgcctggatt tcagcgattg catcgtgccg catcctgtcg cgccggatca
     1441 ggtcacggac ataatcgctc gagttggcgt agcgtcccga cttcgcctga tcctcgaccc
     1501 aggacttcat cggatccggc agcgagatgt tcatggtgcc catggctgtc tccttcgcgg
     1561 cgaggatatg gcaagctttg ccatcaagca accgtctccc cctgccctgc tcggccaatc
     1621 cgtcgtttat tagtgttatc taaaattgca aatggcccgt tttcatgccc ctgataggct
     1681 atgcgcgcgt atccacag
//
LOCUS       DTVW01001230            1046 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_329827, whole
            genome shotgun sequence.
ACCESSION   DTVW01001230 DTVW01000000
VERSION     DTVW01001230.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1046)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1046)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1046
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_329827"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..249
                     /locus_tag="EYO87_16405"
     CDS             <1..249
                     /locus_tag="EYO87_16405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008890567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrite/sulfite reductase"
                     /protein_id="HIC67538.1"
                     /translation="IGLLGLEKNGEEFYQITLGGAADETASIGKIVGPGFSGAEVVDA
                     VETIIDTYLAVRRDDEKFIDTYRRVGNEPFKEKLYATR"
     gene            236..814
                     /locus_tag="EYO87_16410"
     CDS             236..814
                     /locus_tag="EYO87_16410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012109763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF934 domain-containing protein"
                     /protein_id="HIC67539.1"
                     /translation="MPLVKHHRLLDDPWVSVDDDAEIPDDKPIIVSLERWRAERDALI
                     HRGGPLGIRLAADQSSDDIADDLDRFEMVALHFPKFTDGRAHSTARLLRERHGFEGEV
                     RATGQVLRDQFLFMWRCGFDAFEVASTDALEAWHKAMGELSLSYQPAADDRIPAHALR
                     RRRARETAGAASRPGEPEHAPREACCAGDWAD"
BASE COUNT          184 a          348 c          338 g          176 t
ORIGIN      
        1 atcggcctgt tggggctgga gaagaacggc gaggagttct accagatcac cctcggcggc
       61 gcagcggatg agaccgcctc catcggcaag atcgtcggcc ccgggttctc cggcgccgag
      121 gtggtggatg cggtggagac catcatcgac acctatttgg cggtgcgccg ggacgacgag
      181 aaattcatcg atacctaccg ccgtgtcggc aacgagccgt tcaaggagaa gctctatgcc
      241 actcgttaaa caccaccggt tgttggacga cccctgggtg tccgtcgacg acgacgccga
      301 aattcccgac gacaagccca tcatcgtcag ccttgagcgc tggcgcgcag aacgcgatgc
      361 gctgatccac cggggcgggc cgctgggcat ccgcctcgcg gcggaccagt cctctgacga
      421 catcgcagac gatctggatc gcttcgagat ggtcgcgctc catttcccga aattcaccga
      481 cggccgcgcc cattccaccg cccgtctgtt gcgcgagcgg catgggttcg agggcgaggt
      541 ccgcgccacc ggtcaggtgc tgcgcgacca gttcctgttc atgtggcgct gcggattcga
      601 cgccttcgag gtggcaagca cggacgcgct ggaggcgtgg cacaaggcga tgggcgagct
      661 cagcctttcc tatcagccgg ccgccgacga ccgcatcccg gcccatgcgc tgcgccgccg
      721 ccgggcccgc gagaccgccg gtgcggcttc ccgccccggc gaaccggagc acgccccgcg
      781 cgaggcctgc tgcgccggcg actgggcgga ttagggcgtc agatcaaccg ccggtttcgt
      841 ggaatacggc ctatagcgga ttgcacggcc acctcagggt gcgccacata tgggacgccg
      901 gcgtattgtc gttgccgagc ccttcctcgg gctgcctgaa atgccggccg atgatgtcct
      961 cgaattcatc cagcgccacg accacatcgg gatcgaacga atagagatcg ttgacgcaga
     1021 tcatgcggcc cgacatgtac cattta
//
LOCUS       DTVW01001231            1180 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_335785, whole
            genome shotgun sequence.
ACCESSION   DTVW01001231 DTVW01000000
VERSION     DTVW01001231.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1180)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1180)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1180
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_335785"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..956
                     /gene="selD"
                     /locus_tag="EYO87_16415"
     CDS             <1..956
                     /gene="selD"
                     /locus_tag="EYO87_16415"
                     /EC_number="2.7.9.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009565137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="selenide, water dikinase SelD"
                     /protein_id="HIC67540.1"
                     /translation="QALVATTDFFMPIVDDPLDFGRIAATNAISDVYAMGATPIMALS
                     LVGMPIDRLSPETIARILEGGAMACRDAGIPIGGGHSIDSVEAIYGLVALGLVHPDHV
                     RRNTGAKPGDVVILGKPLGVGVFSAALKKEALSPKDYAMMIETVTRLNTPGPDLARLP
                     GVHAMTDVTGFGLAGHALEMARGSGCTLRLDWAAVPLLAGARDLAAGGFVTGASGRNW
                     ASYGGEVALPDGFAPEDRALISDPQTSGGLLVACAEAEADRVLAIFRDHGFAEAAVIG
                     RAEDGAGRLVLGQDGLRPFSGASTARSAPRRPGPAAAAWPD"
     gene            complement(877..>1180)
                     /locus_tag="EYO87_16420"
     CDS             complement(877..>1180)
                     /locus_tag="EYO87_16420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HIC67541.1"
                     /translation="LSNFFGALILLGLGWNFGFIGATTMLARAHRPEERGRVQGINDL
                     FVFGGVFLASLSSGGLMNCTGGSNEGGWYAVNLAMLPLLALAGGALIWLLMRPKTA"
BASE COUNT          192 a          384 c          414 g          190 t
ORIGIN      
        1 agcaggcact ggtggccacg accgatttct tcatgccgat cgtggacgat ccactggatt
       61 tcggccgcat cgccgcgacc aacgcgatca gcgatgtcta tgccatgggc gccaccccga
      121 tcatggccct gtcgctggtg ggaatgccga tcgacaggct gtcgcccgaa accatcgccc
      181 gcatcctcga aggcggcgcg atggcctgcc gcgatgcggg cattcccatc ggcggcggcc
      241 acagcattga ttcggtcgag gcgatctatg gcctggtggc gcttggcctg gtccatcccg
      301 atcatgtcag gcgcaacacg ggcgcgaaac cgggcgatgt ggtgatcctg ggcaagccgc
      361 tgggggttgg cgtcttctct gcggcgctga agaaagaggc cctgtcgcca aaggattacg
      421 caatgatgat cgaaaccgtc acgcggctga acacgcccgg tcccgatctg gcgcgattgc
      481 cgggcgttca tgcgatgacc gatgtgacgg ggttcgggct ggccggtcac gcgctggaaa
      541 tggcgcgcgg atcgggttgc acgctgcggc tggactgggc ggcggtgccg ctgctggcgg
      601 gcgcgcgcga tcttgccgcc ggcggcttcg tgaccggcgc ttcggggcgc aactgggcca
      661 gctatggtgg cgaggtcgcg ctgcccgacg gtttcgcacc cgaggatcgc gcgctgatat
      721 ccgatccgca gaccagcggc ggcctgctgg tcgcctgcgc cgaggccgag gcggaccggg
      781 ttctggccat cttccgcgat cacggctttg ccgaagcggc cgtgatcgga cgcgccgagg
      841 acggggccgg gcggctggtg ctgggccagg acggtctcag gccgttttcg ggcgcatcaa
      901 cagccagatc agcgccccgc cggccagggc cagcagcggc agcatggcca gattgaccgc
      961 ataccagccg ccctcgttcg agcctccggt gcagttcatc agtccgcccg aggacagcga
     1021 cgccagaaag acgccgccga agacgaacag gtcgttgatg ccctgcaccc ggccgcgttc
     1081 ctcggggcga tgtgcgcgcg ccagcatcgt ggtcgcgccg atgaagccga aattccagcc
     1141 aagtcccagc aggatcagcg cgccgaagaa attcgaaagc
//
LOCUS       DTVW01001232            1279 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_33767, whole
            genome shotgun sequence.
ACCESSION   DTVW01001232 DTVW01000000
VERSION     DTVW01001232.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1279)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1279)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1279
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_33767"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..330)
                     /locus_tag="EYO87_16425"
     CDS             complement(<1..330)
                     /locus_tag="EYO87_16425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011910253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HIC67542.1"
                     /translation="MKQAAPPDKGWRGSRQGWLDAAYEALIEGGIDAVKIQPLARRLG
                     LSRTSFYWFFGEREALMSALIAEWEARTTAPLVGASTEYAETQSEAMLNVLACFLTGM
                     FDAPLEFA"
     gene            479..>1279
                     /locus_tag="EYO87_16430"
     CDS             479..>1279
                     /locus_tag="EYO87_16430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_355191.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-methylproline demethylase"
                     /protein_id="HIC67543.1"
                     /translation="MSNDPLLRPYQLKHLTLRNRIMITSHEPAYPEDGMPKARYRAYH
                     VERAKAGVALTMTAGSASVSRDSPPAFNNILVWKDEVVGWMKQLVDECHDHGAAVMIQ
                     LTHLGRRTRWDTGDWLPVLAPSHEREAAHRAFPKRLEDWDMARVIGDFADAAERMKAA
                     GVDGVELEAYGHLLEQFWSPLTNDLEAPFGGNLDNRLRFAFDVIRAVRDRCGTDFIVG
                     LRYTGDQDLPGGMGKAEGLEVSRKLKDSGLVDFLNVIRGHIDTDPGLTD"
BASE COUNT          240 a          388 c          407 g          244 t
ORIGIN      
        1 ggcgaattcc agtggtgcgt cgaacatgcc ggtcaggaag caggccagca cgttcagcat
       61 cgcctcggat tgcgtttcgg catattcggt gctggccccg accagcggcg cggtggtccg
      121 cgcctcccac tcggcgatca gcgcggacat caatgcctcg cgttcaccga agaaccagta
      181 aaagctggtt cgcgacaggc ccagccgtct ggcgaggggc tggatcttga cggcatcgat
      241 gccgccctcg atcagcgcct cataggccgc atccagccag ccctggcgag agccgcgcca
      301 tcctttgtcg gggggggcag cctgtttcat ggcatcaagc tgtaagcgtt atcgcggcgg
      361 gcatcaagaa attgttcttt catgttgtcg caatgtccat aagtgaattc aaaattgaca
      421 ctcatgaaca attttgcgaa cttgcacccg gattttccat ccggaggaag gcaggacgat
      481 gtcgaacgat cccctcttgc ggccctatca gctgaagcac ctgacgcttc gcaaccggat
      541 catgatcacc agccacgaac cggcctatcc cgaggacgga atgcccaagg cccgctaccg
      601 cgcctatcat gtcgagcgcg cgaaggcggg ggtggcgctg acgatgacgg cgggttctgc
      661 ctcggtctcg cgcgacagcc cgccggcctt caacaatatc ctcgtctgga aggacgaggt
      721 cgtcggctgg atgaagcagt tggtcgatga atgtcacgat cacggtgcgg cggtgatgat
      781 ccagctgacc catctgggcc gtcgcacccg ctgggacacg ggcgactggt tgcccgtcct
      841 ggcacccagc catgaacgtg aagccgccca tcgcgccttt ccgaagcggt tggaagactg
      901 ggacatggcc cgtgtgatcg gcgattttgc ggatgcggcc gaacgcatga aggcggcggg
      961 cgtcgatggc gtcgaactgg aggcctatgg ccacctgctg gaacaattct ggtcgccgct
     1021 gaccaacgat ctggaagcgc cttttggcgg caatctggac aaccggctgc gctttgcctt
     1081 cgatgtgatc cgggcggtcc gcgatcgctg cgggacggat ttcatcgtcg ggctgcgcta
     1141 taccggcgac caggatttgc cgggcggcat gggcaaggcc gaggggctgg aggtttcgcg
     1201 caagctgaag gacagcggtc tggtcgattt cctgaacgtc atccgcggcc atatcgacac
     1261 cgatcccggc ctgaccgac
//
LOCUS       DTVW01001233            1622 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_343637, whole
            genome shotgun sequence.
ACCESSION   DTVW01001233 DTVW01000000
VERSION     DTVW01001233.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1622)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1622)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1622
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_343637"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            37..618
                     /locus_tag="EYO87_16435"
     CDS             37..618
                     /locus_tag="EYO87_16435"
                     /inference="COORDINATES: protein motif:HMM:PF14559.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HIC67544.1"
                     /translation="MPETQVRQFIEKLTGSAGSPLDQALEQAAALLESGDADTAHANY
                     QQILQQDLGNTAAHAGLARSLIAGGKPDEARDYLNELSDEMRTNGDIASVVSALELAS
                     DVGAGGDTAAFLEALERNPDDHQARFDLAMAQYGDGATIEAVDTLVEIVSRNLEWNDG
                     AARAQLLKIFEALGHTDPITVEGRRKLSAVLFS"
     gene            618..1292
                     /locus_tag="EYO87_16440"
     CDS             618..1292
                     /locus_tag="EYO87_16440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007005815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase S16"
                     /protein_id="HIC67545.1"
                     /translation="MPDPFAPGPFGIKFDALPDAISIFPLPGALLLPKGRLPLNIFEP
                     RYLAMIFDALGEGRLIGMVQTEAEHGGLVPEDAGLFGIGCAGRIVAFNETPDGRLLIT
                     LEGVCRYRIDEELADKNGYRRVRPDFSSFRADMDGGPPDLDRESFLALLRRYFDAKQL
                     KVDWASLEQTEDRLLIATLAMMCPFGLPEKQALLEAPDFAAITDVMQSLMTMAIQDTG
                     PSTSRH"
     gene            1312..1494
                     /locus_tag="EYO87_16445"
     CDS             1312..1494
                     /locus_tag="EYO87_16445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014103853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Trm112 family protein"
                     /protein_id="HIC67546.1"
                     /translation="MSNQDVDPKLLEILVCPMTKGPLRYDREARELVSEKAKLAYPIR
                     DGIPIMLVDEARKLDD"
BASE COUNT          317 a          495 c          499 g          311 t
ORIGIN      
        1 caagagggca agccggtcga cggtttcgcc ggcgccgtgc ccgagaccca ggtgcgccag
       61 tttatcgaga aactgaccgg gtccgccggt tcgcccctgg atcaggcgct ggaacaggcg
      121 gcggcgctgc tggaaagcgg cgacgccgac acggcgcatg ccaactatca gcagatattg
      181 cagcaggatc tcggcaatac cgccgcccat gccgggctgg cgcgtagctt aatcgccggc
      241 ggcaagccgg acgaggctcg cgattatcta aacgagctgt ccgatgaaat gcgcacaaac
      301 ggcgacatcg cttcggttgt ttcggctctg gaactggcca gcgacgttgg tgccggcggc
      361 gatacggccg cgtttttgga ggccttggaa cgcaatcccg atgatcatca ggcgcgcttc
      421 gatctggcca tggcccaata tggcgacggc gccaccatcg aggccgtcga taccctggtg
      481 gagatcgtca gccgtaatct ggaatggaac gatggcgccg cgcgcgccca gcttttgaaa
      541 atattcgaag ccctcggcca taccgatccg atcaccgtcg agggccggcg caagctttcg
      601 gcggtgctgt tctcctgatg cccgacccgt tcgcccctgg cccgttcggc attaaattcg
      661 acgcgttgcc ggatgcgatc agcatatttc ccttgccggg cgccctgttg ctgcccaagg
      721 gccgcttgcc cctcaatata ttcgagcccc gctacctggc gatgattttc gatgccctcg
      781 gcgagggccg gctgatcggc atggtgcaaa ccgaagccga gcatggcggc ttggtgccgg
      841 aagatgccgg cctgttcggc atcggttgcg ccgggcgcat cgtcgccttt aatgagaccc
      901 ccgacgggcg gctgctgatc accctcgaag gcgtctgccg ctaccgcatc gacgaagaac
      961 tggccgataa aaacggctac cggcgggtgc gcccggattt ttccagcttt cgcgcggaca
     1021 tggacggggg gccgccggat ctggaccggg aaagttttct ggcccttttg cgccgctatt
     1081 tcgacgccaa acaattgaag gtggattggg cgtccctgga acagaccgag gaccggttgc
     1141 tgatcgccac tctggccatg atgtgcccgt ttggattgcc ggaaaaacag gctttgctgg
     1201 aagcgcccga cttcgcggca atcaccgatg tgatgcaatc tctgatgacc atggccatcc
     1261 aggacaccgg accctctacc tctagacatt gaattggaat agagttcagc catgagcaat
     1321 caagatgtcg atcccaagct tttggaaatc ctggtctgcc cgatgaccaa ggggccgctc
     1381 cgctatgacc gggaagcaag ggaattggtt tccgaaaagg ccaagctggc ctatccgatc
     1441 cgcgacggta ttcccatcat gctggtcgac gaagcgcgca agctggacga ctaatctgct
     1501 cggctttcgg tgcccgccgg ctcgctgcca tagcggcgca tcatccagat caggatcacc
     1561 aacgccggaa gcgcaaggat agcggtaatg acgaagaatg tgatccagtc gacgcgctcg
     1621 gc
//
LOCUS       DTVW01001234            1246 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_347178, whole
            genome shotgun sequence.
ACCESSION   DTVW01001234 DTVW01000000
VERSION     DTVW01001234.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1246)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1246)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1246
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_347178"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(81..>1246)
                     /locus_tag="EYO87_16450"
     CDS             complement(81..>1246)
                     /locus_tag="EYO87_16450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011749070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="double-strand break repair protein AddB"
                     /protein_id="HIC67547.1"
                     /translation="LSRDMRAAAGLTLPERLIGLAAHDFQQAIGAETVILTRARRDAE
                     AETIPSRWLNRLTNLMAGLPERRGPEALAAMRDRGRVWLDLARAVTQPETAVPAAPRP
                     SPLPPAPAFADLPVTDVGLLIRDPYAVYAKRVLGLRPLPPLRPEPDAALRGQILHSIV
                     EALLKATPHSDPDPVALRADFLRITAQVLEDAVPWPAARAFWQARMERIADRIVADEV
                     SRRRDGSPVVIEHRGKVGLPALGFSLTAKPDRIDLLHDGRVMIYDYKSGTPPSEKQMA
                     RFDKQLILEAAMARRGGFDALGPAEVAGLRYIQLGGEGLTHDRAYSAESEAEAWHGFQ
                     RLIAAYLTGGTGFTAMNAPERTSYAGDYDHLARFGEWSLSDSAQPRKVGDHDG"
BASE COUNT          178 a          427 c          450 g          191 t
ORIGIN      
        1 gcgtcttgcc cgatccggca ttggccgtca gccaggtcga acaggcagga tcggcggcct
       61 cgatctggtt ccgcgtcgcg tcatccatcg tgatcgccca cctttcgggg ctgcgcggaa
      121 tccgacagcg accattcccc gaaccgtgca aggtggtcgt aatcgccggc atagctggtc
      181 cgttccgggg cattcatcgc ggtaaacccg gtcccgccgg tcaggtaggc cgcgatcagg
      241 cgctgaaagc catgccatgc ctcggcttcg gattcggcgc tataggcgcg gtcatgggtc
      301 agcccttcgc cgcccagctg gatatagcgc agaccggcca cctcggccgg cccaagcgcg
      361 tcgaagccgc cgcgccgggc cattgcggcc tccaggatca gttgcttgtc gaaccgcgcc
      421 atctgctttt cgctgggcgg agttccggat ttgtagtcgt agatcatcac ccgcccgtcg
      481 tgcagcaggt cgatccggtc gggcttggcc gtcaggctga agccaagcgc gggcaggccg
      541 accttgccgc gatgctcgat cacgacgggg ctgccgtcgc gacggcgcga tacctcgtcc
      601 gccacgatcc ggtcggcgat gcgttccatc cgggcctgcc agaaggcccg tgcggccggc
      661 cagggcaccg cgtcttccag cacctgcgca gtgatccgca ggaagtcggc gcgcagtgcg
      721 acagggtcag ggtcggaatg gggggtagct ttcagcaacg cctcgacgat gctgtgcagg
      781 atctgtccgc gcagggcggc atcgggttcg ggccgcagcg gcggcagcgg gcgcaggccc
      841 aggacccgct tggcatagac cgcatagggg tcgcggatca gcaggccgac atcggtgacg
      901 ggcaggtcgg caaaggccgg cgcgggcgga aggggcgagg gtcgcggcgc cgccgggacc
      961 gccgtttcgg gctgggtgac ggcgcgggcc aggtccagcc agacccgccc gcgatcgcgc
     1021 atcgcggcca gcgcctcggg gccgcggcgt tcgggcagcc ccgccatcag gttcgtcagc
     1081 cggttcagcc agcgcgaggg gatcgtctcg gcctcggcat cgcggcgggc gcgggtcagg
     1141 atgacggttt ccgccccgat cgcctgctgg aaatcatgcg cggccagccc gatcaggcgt
     1201 tccggcaggg tcaggcccgc cgccgcccgc atgtcgcgcg acagcc
//
LOCUS       DTVW01001235            1145 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_350352, whole
            genome shotgun sequence.
ACCESSION   DTVW01001235 DTVW01000000
VERSION     DTVW01001235.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1145)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1145)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1145
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_350352"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            1..909
                     /locus_tag="EYO87_16455"
     CDS             1..909
                     /locus_tag="EYO87_16455"
                     /inference="COORDINATES: protein motif:HMM:PF02781.14"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67548.1"
                     /translation="MDHYLGKEALLNLTYFRFGNRFLEPIWNREHVRSVQITMAEDFG
                     VEGRGAFYDEAGAIRDVMQNHMLQMIALLAMDPPAARDDESLRDAKVRVLRSMRPLAP
                     DDVVRGRYRGYLQEAGVHSDSRTETFAAIRFHIDSWRWAGVPFMVRVGKQMPVTATEV
                     LVDLRRPPQALFDDSATLDRNYFRFQFKPFTTISIGAMAKKAGEAMVGEQIEMIALHQ
                     EPDEMSAYERLIEDALLGQAGLFARVDEVESAWRIVDPILTANTHLYDYQPSTWGPLE
                     ARQLVVGHCAWHDPLSPVKMIPAGDP"
BASE COUNT          204 a          360 c          366 g          215 t
ORIGIN      
        1 atcgatcact acctcggcaa ggaggcgctg ctcaacctga cctacttccg cttcggaaac
       61 cggttcctcg agccgatctg gaaccgggaa catgtccgca gcgtgcagat caccatggcc
      121 gaggacttcg gcgtcgaggg tcgcggtgcc ttctacgacg aggccggcgc catccgggat
      181 gtcatgcaga atcacatgct tcagatgatc gcgctgctcg ccatggaccc gccggcggcc
      241 cgtgacgacg agtcgctgcg tgatgccaag gtgcgggtgc ttcgctcgat gcggccgctc
      301 gcgccggacg atgtcgtgcg aggccgatac cgcggttacc tgcaggaagc cggcgttcat
      361 tccgattcgc gcacagagac cttcgcagcc attcggtttc acattgactc gtggcgatgg
      421 gcgggggtac cgttcatggt ccgcgtcggc aagcaaatgc cggtgacggc gaccgaggtg
      481 ctggtcgacc tgcgtcgtcc gccgcaggcc ttgttcgacg acagcgccac tctcgatcga
      541 aactactttc gattccagtt caagccgttt acgaccattt caatcggtgc gatggcgaag
      601 aaggccggcg aagcgatggt cggcgagcag atcgagatga tcgccctgca ccaggaaccg
      661 gatgagatgt ccgcctatga gcggctcatc gaggacgcgc tgcttggcca ggcggggctg
      721 tttgcgcggg tagatgaagt cgaatcggcg tggcgcatcg ttgatccgat cctcacggcg
      781 aacacgcatc tgtacgatta ccagccatcg acctggggcc cgttggaggc gaggcaactc
      841 gtcgtcggcc actgcgcctg gcatgacccc ctttcgccgg tgaagatgat tccagcgggt
      901 gatccatgac gccgcttccg ggcccccgcg tactggccga cggcctgacg ctggagatac
      961 tgcaagacgc cgacgcagtc gccatccgag cggccagttg gatcgcaggc acgctgatcc
     1021 gcgtcggatc gtcccacgcg cgatgtgtgc tggccatcag cgggggccgt tcgccatggc
     1081 cgatgtttcg tcactggacc cctcatttta cgacggtgcc agcaccgcaa aacgatgcca
     1141 tatgc
//
LOCUS       DTVW01001236            1144 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_350878, whole
            genome shotgun sequence.
ACCESSION   DTVW01001236 DTVW01000000
VERSION     DTVW01001236.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1144)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1144)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1144
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_350878"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..326)
                     /locus_tag="EYO87_16460"
     CDS             complement(<1..326)
                     /locus_tag="EYO87_16460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_353478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine dehydrogenase"
                     /protein_id="HIC67549.1"
                     /translation="MSSPLRLGIAGLGTVGIGVVKIVQKHAELLGRRTGRAVTITAVS
                     ARDRMKNRDADLSAYRWEDDPTAVATADDVDVYVELVGGENGVARDSIEAALRAGKDV
                     VTANKAL"
     gene            complement(439..960)
                     /locus_tag="EYO87_16465"
     CDS             complement(439..960)
                     /locus_tag="EYO87_16465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67550.1"
                     /translation="MSLPRAPDRLSDEMALAIGHAVSGFGFLEEALKRAIFSLTRQGL
                     GEDATESALEKWLRRMEEIADDSLGTLIDSFVAATNRAGIEDRQALAGTLSELRLRRN
                     LLCHASWRPGDRPGYWHPTFINTRGERYPDDMNPQDVRDIHAATLQAARRIVSIMRAT
                     GIDGEWAGHRDED"
BASE COUNT          155 a          396 c          402 g          191 t
ORIGIN      
        1 agcgccttgt tggcggtgac gacatccttg cccgcgcgca gcgccgcctc gatgctgtct
       61 ctggcgacgc cattctcgcc gccgaccagt tcgacataaa cgtccacgtc atcggcggtg
      121 gcgacggctg tggggtcgtc ctcccagcga taggccgaca gatcggcgtc gcggttcttc
      181 atccggtcgc gcgcgctgac cgcggtgatc gtcaccgccc ggccggtccg gcggcccagc
      241 agttcggcat gtttctgcac gatcttgacg acaccgatcc cgacggtgcc cagcccggca
      301 atgcccaggc gcagggggga cgacatggaa gcctcttgtt gtcgcgattt cgcggcgtgt
      361 tagcgcggca ggggcggcgt tgcaacgcgg gaaagccgtt atcaccgcac gccggccggc
      421 gtggatcgcg acagggcctc aatcctcgtc ccgatggccg gcccattcgc cgtcgattcc
      481 ggtcgcgcgc atgatcgaca cgatccgccg cgcggcctgc agcgtcgcgg catggatgtc
      541 gcggacatcc tgcggattca tgtcgtccgg atagcgttcg ccgcgcgtgt tgatgaaggt
      601 gggatgccag tagcccggcc gatcgccggg ccgccaggag gcatggcaca gcaggttccg
      661 ccgcagccga agctcgctca gcgtcccggc cagcgcctgc ctgtcctcga tcccggcgcg
      721 gttcgtcgcg gcgacgaaac tgtcgatcag cgtgcccagc gaatcgtcgg cgatctcttc
      781 catccgccgc agccatttct ccagcgcgct ttcggtcgca tcctcgccca gtccctggcg
      841 tgtcaacgag aagatcgccc gtttcagcgc ctcttccaga aagccgaagc ccgagacggc
      901 gtggccgatg gccagggcca tctcgtcgga taatcgatcg ggcgcgcggg gcaggctcat
      961 gcgcccgttc tagcggggcc ggcgggggct gtctgccccc tccctgcggc ggaaagaaag
     1021 cctgccgtgg cgccgccggc tgcggcgggg gcgggcggtt cttgggccgc cggccgttgc
     1081 ggggcgcatt caggcggcac gggccgcgcg gatcaggcgc aggatatcgg cggcggcggc
     1141 gggg
//
LOCUS       DTVW01001237            1144 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_364789, whole
            genome shotgun sequence.
ACCESSION   DTVW01001237 DTVW01000000
VERSION     DTVW01001237.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1144)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1144)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1144
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_364789"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..654
                     /locus_tag="EYO87_16470"
     CDS             <1..654
                     /locus_tag="EYO87_16470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018431179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIC67551.1"
                     /translation="ENVEMPLLVSDVALRRARARAMEMLDRVGIPDAEARLDNYPHEF
                     SGGMRQRVLIAMALIGRPDLLIADEPTTALDVSVQAQILKLLKGTVADHDIGVILITH
                     NLGVVAQTCTHVAVMYAGNIVESGPVAKVIEDPAHPYTKALMAAIPTKHSRRGSLNGL
                     GGTVPNLIAPSPGCRFAPRCPLAVSDCSRALPPAVAVGRDHRAACIRVRENERLVHV"
     gene            647..>1144
                     /locus_tag="EYO87_16475"
     CDS             647..>1144
                     /locus_tag="EYO87_16475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006937996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIC67552.1"
                     /translation="MSEPILQIENVSKVYGARRSMFGHTSEVQALKDVSISVNKGESF
                     GLVGESGSGKTTLTRSILHLETPTSGRILFEGRDLAKLSAVELRRLRARVQIVFQDPY
                     ASLNPRMSVRDIVTEPMQVHQDSLGLDRRQRIDRAAELLSLVGLGAQHLTRYPHEFSG
                     GQRQRI"
BASE COUNT          206 a          342 c          390 g          206 t
ORIGIN      
        1 gagaacgtgg agatgccgct cctggtctcc gacgttgccc tgcgccgagc gagggcgagg
       61 gcgatggaga tgctggaccg ggtcggcata cccgatgccg aagcgcggct ggacaactat
      121 ccacatgaat tttccggcgg gatgcgccag cgtgtgctga tcgccatggc gctgatcggg
      181 cggcccgatc tgctgatcgc ggatgagccg acgaccgcgc tggatgtgtc ggtgcaggcg
      241 cagatcctca agctgctcaa gggtacggtg gcagatcacg acatcggcgt gatcctcatc
      301 acgcacaatc tgggcgtcgt ggcgcagacc tgcacccatg tcgctgtgat gtatgccggg
      361 aacatcgtcg aaagcgggcc ggtcgccaag gtgatcgaag atccggcgca tccttatacc
      421 aaggcactga tggcggcgat cccgaccaag cactctcgtc gcgggtcgct caacgggctg
      481 ggtgggacag tgccgaacct gatcgcgccg tcgccggggt gccgttttgc cccgcgctgt
      541 ccactggcgg tgtccgattg ctcccgcgcg cttcctccgg cggttgcagt ggggcgcgat
      601 caccgggcgg cctgcatccg ggtgagagaa aacgaaagac ttgtccatgt ctgagcccat
      661 ccttcagatc gagaacgtgt caaaggtcta cggagcccgg cgcagcatgt tcggccacac
      721 gtcggaggta caggcgctga aggatgtgtc gatctcggtg aacaagggcg aaagctttgg
      781 gctggtgggc gaaagcggat cgggcaagac aacgctcacg cggtcgatcc tgcatctgga
      841 aacccccact tccgggcgca tcctgttcga gggacgtgat ctggcgaaat tgtcagctgt
      901 cgagttgcga cgcttgcggg cgcgggtgca gatcgtgttt caggacccct acgcctcgct
      961 caatccgcgc atgtcggtgc gggacatcgt gacagaaccg atgcaggtgc atcaggacag
     1021 ccttggccta gaccggcggc aacgcatcga ccgcgcggcg gaactgttgt cgctggtcgg
     1081 actgggcgcg caacacctga cgcgctatcc gcacgagttt tcgggtggcc agcgccagcg
     1141 catc
//
LOCUS       DTVW01001238            1903 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_366193, whole
            genome shotgun sequence.
ACCESSION   DTVW01001238 DTVW01000000
VERSION     DTVW01001238.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1903)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1903)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1903
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_366193"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1679
                     /locus_tag="EYO87_16480"
     CDS             <1..1679
                     /locus_tag="EYO87_16480"
                     /inference="COORDINATES: protein motif:HMM:PF01370.19"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HIC67553.1"
                     /translation="IPEGASKLLTSYNPVSHLLAAYQNTYWYGQAISLEVLPWVTVLG
                     LGLIGLLGRYVFGGPRRNLADASRHRAGVRLVYLRAGAAEPDAAAVRLTPWRARFRDL
                     RGRDLVRMIVANWGLSRLERDRRIEEIARDSTVERLFDDYLAIYPDQALDQLAFAVAM
                     RSPAPAITLDGILDTLAPGFRVAAWEAMVRAAEQGRSIDIVCRQPVPPPDLAAGIFEI
                     IGPGGVVARGKIGPELALAYDRPVVLVADEIPVSAAGAQEISAFPAILVTGASSQIGQ
                     CVVHRLCQARRPVVALGRGRPRYSMNAHLRFIEGDLEKTGIAFPESLSSVVHIAGIWL
                     LPNHLDALHARGVRRIVCFSSTSIFVKQGSSNIGERDLVARMKAAEAEVAARCKVLGI
                     VWTVLRPTLVYGLGIDRNVSRAARFIRRFGVYPLASAATGMRQPVHADDLAAAALAAL
                     AAPAAAGRSYELGGGEVLNYREMIGRIFDALERRRRFLAIPGLEILAAVVGIVLRRPE
                     VTGEMVRRMRQDLVCDNGPAARDLYYRPRNFLAGGGADLGLDGIDSRTPR"
     gene            1692..>1903
                     /locus_tag="EYO87_16485"
     CDS             1692..>1903
                     /locus_tag="EYO87_16485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010658570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HIC67554.1"
                     /translation="MTDKTALITGVTGQDGAYLAELLLAKGYEVHGIKRRSSSFNTAR
                     VEHLYEDPHDSGVRFTMHYGDMTDAT"
BASE COUNT          306 a          586 c          651 g          360 t
ORIGIN      
        1 atatcccgga aggtgccagc aagctgctga caagctacaa tccggtatcc catcttcttg
       61 ccgcctatca aaacacctat tggtacgggc aggccatcag cctggaggtg ctgccctggg
      121 tgacggttct gggccttggc ttgatcgggc tgcttggccg ctacgtcttc ggcggtccgc
      181 gccgcaattt agccgacgcc agccgccatc gtgccggcgt caggctggtg tatttgcgcg
      241 ccggcgccgc cgaaccggac gcggcggcgg tgcggctgac gccatggcgc gcccgtttcc
      301 gggatcttcg ggggcgcgat ctggtccgga tgatcgtggc gaattgggga ttgagccggt
      361 tggagcggga ccgccgcatc gaggaaatcg cacgagacag cacggtcgaa cggctgttcg
      421 acgattatct cgccatctat cccgaccagg cgctcgacca gctcgctttt gccgtggcga
      481 tgcgctcgcc ggcaccggcc atcaccctgg acggcattct ggatacattg gcgccgggat
      541 tccgtgttgc ggcctgggag gcgatggtac gggctgccga acaggggcga agcatcgata
      601 tcgtctgccg gcagccggtt ccgccgccag atttggctgc cggtatcttt gaaatcattg
      661 gccccggcgg tgtcgttgca cgaggcaaaa tcggacccga actggcgctg gcctatgacc
      721 ggccagtggt gctggtggcg gacgagatcc cggtttcggc cgctggcgcg caggaaattt
      781 cggcctttcc ggccatcctg gtgaccggcg caagcagcca gatcgggcaa tgcgtggtgc
      841 accggctctg ccaggcgcgc cgtccggttg tcgcgctcgg ccgggggcgg cccagatatt
      901 cgatgaatgc gcatctgcgg ttcattgaag gggacctgga aaagaccggt atcgcgttcc
      961 cggaatcgct ttcctcggtc gtgcatatcg ccggaatctg gctgttgccg aaccatcttg
     1021 acgcgcttca tgcgcgtggg gtccgccgca tcgtctgttt cagctcgacg tcgatattcg
     1081 tcaaacaggg gtcgtcgaac atcggcgaac gcgatctggt ggcgcgcatg aaggcggcgg
     1141 aagccgaggt cgcggcacgc tgcaaggtgc tgggaatcgt ctggaccgtg ctgcggccga
     1201 cactagtcta cgggctcgga atcgaccgca acgtgtcgcg cgcggcccgg ttcatccggc
     1261 gcttcggcgt ttatccgctg gcgtcggcgg ctaccggcat gcgccagcca gtgcatgccg
     1321 acgacctcgc ggcggcggcg ctggccgcgc tggcagcacc tgcggcggcg ggccgcagct
     1381 atgagttggg cggcggcgaa gtgcttaatt accgggagat gatcgggcga attttcgatg
     1441 cgctggagcg ccggcggcgg ttcctcgcca ttcccggcct ggaaatcctt gccgccgtcg
     1501 tcggcatcgt attgcggcgc cccgaagtga ccggagagat ggtccggcgg atgcgtcagg
     1561 atctggtctg cgacaacggc ccggccgcgc gcgacctgta ctaccggccg cgaaatttcc
     1621 tcgccggcgg cggggcggat ttgggcctcg atggcattga cagccggacg ccgagataag
     1681 acattcgcgc gatgaccgac aaaaccgcgt tgattaccgg ggtgaccggc caggacggtg
     1741 cctatctggc ggaactcctg ctggccaagg gctatgaagt gcacggcatc aagcggcgct
     1801 cgtcgtcgtt caataccgcc agggttgaac atctgtacga ggacccgcat gattccggcg
     1861 tgcgtttcac catgcattac ggcgacatga ccgacgccac caa
//
LOCUS       DTVW01001239            1479 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_36758, whole
            genome shotgun sequence.
ACCESSION   DTVW01001239 DTVW01000000
VERSION     DTVW01001239.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1479)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1479)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1479
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_36758"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(42..563)
                     /locus_tag="EYO87_16490"
     CDS             complement(42..563)
                     /locus_tag="EYO87_16490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009175990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease subunit"
                     /protein_id="HIC67555.1"
                     /translation="MPLIRLIDSINEAVGRVVSVVAVLFAGIIIYDVVMRYVFGQPTR
                     WAFDLTKQLYGFYFILLGGYALRHQAHVRVDLVTARLRPALRRWVEIAGYIIFFLPFA
                     WVFARRSWDFAMTSWQQGEVTYGAVQLPVYPLKMAMFVAAVLLLLQGISEILKLALRK
                     TDDLQPMEPLDVR"
     gene            complement(628..1395)
                     /locus_tag="EYO87_16495"
     CDS             complement(628..1395)
                     /locus_tag="EYO87_16495"
                     /EC_number="4.2.1.17"
                     /inference="COORDINATES: protein motif:HMM:PF00378.18"
                     /note="Catalyzes the reversible hydration of unsaturated
                     fatty acyl-CoA to beta-hydroxyacyl-CoA; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase"
                     /protein_id="HIC67556.1"
                     /translation="MAEPILFQVDGAIATVTLNRPAARNAINAELNDAMTAAFDRIEA
                     DDDIRIAILAASGPAFSAGLDLRAFSEGKAGAILDGPFGFGGLARRMRKKPLIAAVAG
                     PALAGGFELALACDMIVAGPGARFGLPEPQRGLIAGAGGVFRLAARIPQARAAEILLS
                     ARAFDRDEAMELGLISLASADDPLPDARALAHRIVANAPLSVTATLALLNAARNRDEA
                     ELWRRNDSIFAPVAASADAKEGALAFAEKRPARWRGC"
BASE COUNT          298 a          491 c          465 g          225 t
ORIGIN      
        1 ggcccagcag cagcaggccg gacatgacca gcgcaatcgt ttcaccggac atccagcggc
       61 tccatcggtt gaagatcgtc ggtcttgcgc agggccagtt tcagaatttc gctgataccc
      121 tgcagcagca gcaggaccgc cgccacgaac atcgccatct tcagcggata gaccggcaat
      181 tgcacggcac catacgtcac ctctccctgt tgccacgagg tcatggcgaa atcccagctg
      241 cggcgggcaa aaacccaggc gaagggcagg aagaagatga tgtagcccgc aatctcgacc
      301 cagcggcgca gggcgggacg caagcgcgcc gtgaccagat cgacgcgcac atgggcctga
      361 tggcgaaggg catacccgcc aagcaagata aagtagaacc cgtagagttg cttggtcagg
      421 tcaaaggccc atcgcgtcgg ctgcccgaac acatagcgca tgacgacatc atagatgatg
      481 attcccgcaa acagcacggc cacgaccgat acgacgcggc caacagcctc gtttatcgag
      541 tcgataaggc ggatcagcgg catgtggtaa ttccccctgc gttgatgcgg tccgccggtt
      601 tcagggcgtc gcgcaattcg aaccctatca gcatccgcgc catctggcgg gccgtttttc
      661 ggcaaaggcc aaggcaccct ccttcgcatc ggccgaggcg gcgacgggcg cgaagatgct
      721 gtcattgcgg cgccacaatt ccgcctcgtc cctgttccgg gcggcattca gcaaagccag
      781 cgtcgcggtc acggacaagg gggcgttggc gacgatccga tgcgccaggg cccgcgcgtc
      841 gggcaacgga tcgtcagcgg atgcaaggct tatcagaccc agttccatcg cctcgtcccg
      901 atcgaaagcg cgcgcagaca agagaatctc ggcagcacgg gcttgcggga tgcgggcggc
      961 cagccgaaac acccctcccg cgcccgcgat caggccgcgc tgcggttccg gcaggccgaa
     1021 ccgcgccccc ggtccggcca cgatcatgtc gcaggccagt gccagttcga accctcccgc
     1081 cagcgccgga cccgccacgg cggcgatcag gggtttcttg cgcatccgcc gtgccagacc
     1141 accaaagccg aaaggcccgt ccagaatcgc gccggccttg ccttcggaaa aggcccgcag
     1201 atccaggccg gcagaaaagg ccggaccgct ggcagcgaga atcgcgatgc ggatatcgtc
     1261 atccgcctcg atccggtcaa aggctgcagt catcgcgtcg ttcagctccg cattgatcgc
     1321 attgcgggca gccgggcgat tcagcgtgac ggtggcgatg gcgccatcga cctggaacag
     1381 gatcggctca gccatcggcg ggctttgtcg cctgcgccga cagcgcggcg cgggcacgca
     1441 attcggcgcg gatgatcttg ccggtggtgg tcatcggca
//
LOCUS       DTVW01001240            1208 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_383823, whole
            genome shotgun sequence.
ACCESSION   DTVW01001240 DTVW01000000
VERSION     DTVW01001240.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1208)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1208)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1208
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_383823"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..713
                     /locus_tag="EYO87_16500"
     CDS             <1..713
                     /locus_tag="EYO87_16500"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014992622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HIC67557.1"
                     /translation="GTLDWLRPDAKSQLTLRYGADGRPEAIDAVVLSTQHNPEITLAD
                     LREAVIEEIIKPVLPAEWLSPETKYFINPTGKFVIGGPVGDCGLTGRKIIVDSYGGMA
                     RHGGGAFSGKDPSKVDRSAAYAGRWVAKNIVAAGLASRCEIQVSYAIGEARPTSISLN
                     TFGTETVPHERIVAALREVFDLRPFAIIRDLDLLHPIYRPTATYGHFGRDPHALAGAT
                     AFSWERTDRAEALKAALS"
     gene            complement(777..1148)
                     /locus_tag="EYO87_16505"
     CDS             complement(777..1148)
                     /locus_tag="EYO87_16505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012112171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67558.1"
                     /translation="MPPPPAAEAATGPGDPLLPAKLIYGLYAIGYAVAITTLVGVVYA
                     YIARGRHPVLDTHLTFQIRTFWISLLIAVLAVVTMVVGLGFLIWAFLAVWGVIRVLSG
                     FLLANDGKPVTGTKYWGMMAF"
BASE COUNT          222 a          398 c          403 g          185 t
ORIGIN      
        1 acggcacgct ggactggttg cgcccggacg ccaagtcgca gctgacgctg cgctatggtg
       61 cggacggccg gcccgaggcc atcgacgcgg tggtcctgtc cacccagcac aatcccgaaa
      121 tcaccctggc cgatctgcgc gaggcagtga tcgaggaaat catcaagccg gtcctgcccg
      181 ccgaatggct gtcgcccgaa accaagtatt tcatcaatcc gaccggtaaa ttcgtcatcg
      241 gcgggccggt cggcgattgc gggctgaccg ggcgcaagat catcgtggac agctatggcg
      301 gcatggcccg gcatggcggc ggcgcgttct cgggcaagga tcccagcaag gtggatcgct
      361 cggccgccta tgcgggacgc tgggtggcca agaacatcgt cgcagccggc ttggccagcc
      421 ggtgcgaaat tcaggtcagc tatgcgatcg gcgaagcgcg gcccacttcg atcagcctga
      481 acaccttcgg aaccgagacg gtgccgcacg agcggatcgt ggccgccctg cgcgaggtct
      541 tcgacctgcg ccccttcgcc atcatccgcg acctggacct gctgcatcca atctatcggc
      601 cgaccgcgac ctatggccat ttcggccgcg atccccatgc gctggccggg gcgacggcgt
      661 tttcctggga acggaccgac cgcgccgagg cgctgaaagc ggcgctgagc tgaccggccg
      721 gggcgctttg ccccggatgc cggacccgcc agccggggat gccgggtcgc gcgttctcag
      781 aacgccatca tgccccagta tttcgtgccg gtgaccggct tgccatcatt ggccagcaga
      841 aagcccgaca ggacgcgaat cacgccccag accgcaagaa aggcccagat caggaagccg
      901 aggcccacga ccatcgtgac gacggccagg accgcgatca gcaggctgat ccagaacgtc
      961 cggatctgga aggtcagatg cgtgtccaga accgggtgcc ggcccctggc gatataggca
     1021 taaaccaccc cgaccagtgt cgtgatcgct accgcatagc cgatggcgta aagcccatag
     1081 atcagtttcg cgggcagcaa cggatcgccg gggccggtcg cggcttcggc tgcgggcggg
     1141 ggtggcatat cggtcatgac ggggctccgt acaggttgcg ggcgcgatcc tcgaaggcgc
     1201 ggacgatg
//
LOCUS       DTVW01001241            2119 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_385143, whole
            genome shotgun sequence.
ACCESSION   DTVW01001241 DTVW01000000
VERSION     DTVW01001241.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2119)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2119)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2119
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_385143"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..424
                     /locus_tag="EYO87_16510"
     CDS             <1..424
                     /locus_tag="EYO87_16510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="beta-ACP synthase"
                     /protein_id="HIC67559.1"
                     /translation="VMPSAQGAERAITGALQDARLNPDQVGYINAHGTGTAANDKTEC
                     AAVAHAFGHHADRLMISSTKSMHGHVIGGTGAVEMLACIMALRDGVIAPTIGYQEPDP
                     ECALDVVPNEAREARVEAVLSNAFAFGGLNAVVALRRV"
     gene            complement(494..1243)
                     /locus_tag="EYO87_16515"
     CDS             complement(494..1243)
                     /locus_tag="EYO87_16515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011908078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="invasion associated locus B family protein"
                     /protein_id="HIC67560.1"
                     /translation="MLNKSSQALILALSVIAAPAFAQDAAAPAEATQPATSAPETTAA
                     PQAPATGETAPAADAATASQDNATPAAPADDGAPKAGSYYVKSTKQDWTIRCVKAQQG
                     KDPCELYQLMKDQNDNSVAEITVIPLKNGDVAAGATLVAPLETDLIEGLGFAVDDGKS
                     RGYPFSFCASVGCVSRMGFTDAELTALKRGNKAVVSLLPFGADPKKPVQLTLSLTGFT
                     AAFDELTDYASTPATSNGAAPAETESAPSGN"
     gene            1820..>2119
                     /locus_tag="EYO87_16520"
     CDS             1820..>2119
                     /locus_tag="EYO87_16520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010392276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF853 family protein"
                     /protein_id="HIC67561.1"
                     /translation="MTGVLDAEANTIFVGGGGPSYANPQSLLMKYANRHGMIAGATGT
                     GKTVTLQTLAESLSLAGVPVFLSDVKGDLAGLSQSGSAEARLHEAFSKRAGQIGLD"
BASE COUNT          360 a          681 c          692 g          386 t
ORIGIN      
        1 cgtcatgccc tcggcccagg gcgccgagcg cgcgatcacc ggtgccttgc aggatgcgcg
       61 cctgaatccc gatcaggtcg gctatatcaa tgcccatggc accggcactg cggccaatga
      121 caagaccgaa tgcgccgccg tcgcccatgc cttcggtcat cacgccgacc ggttgatgat
      181 ctcgtccacg aaatcgatgc atggccacgt gatcggcggc accggcgcgg tggaaatgct
      241 ggcctgcatc atggccctgc gcgatggcgt gatcgcgccg acgatcggct atcaggaacc
      301 ggatccggaa tgtgcgctgg acgtggtgcc gaacgaggcg cgcgaggcgc gggtcgaagc
      361 ggtcctgtcc aacgccttcg ctttcggcgg gctgaacgca gtcgtcgccc tgcgccgggt
      421 ctgaacacgg tcgggcccat atcgcaacgc cgcgcccggc gggcacggcg atctggcatt
      481 cgcaggtatg cgatcaattg cccgaaggcg cgctttccgt ttcggccggg gcggcaccgt
      541 tcgaggttgc gggcgttgat gcataatcgg tcagttcatc gaacgccgcc gtgaaaccgg
      601 tcagcgagag ggtcagctga accggctttt tcggatcggc gccaaagggc agcaggctga
      661 cgacggcctt gtttccgcgc ttcaatgcgg tcagttcggc atcggtgaaa cccatgcgcg
      721 acacgcagcc gacagaggcg cagaagctga acggataccc gcgcgacttg ccatcatcga
      781 ccgcaaagcc aagcccctcg atcaggtcgg tttccagcgg tgccaccagc gtcgcgccag
      841 ccgcgacatc gccgtttttc agcgggatca ccgtgatttc cgccacggaa ttgtcattct
      901 gatccttcat cagctgatac aattcgcacg gatccttgcc ctgctgggcc ttgacgcaac
      961 gaatggtcca gtcctgtttc gtcgatttga catagtagct tccggccttc ggcgcgccat
     1021 catcagcggg cgcggccggg gtggcgttgt cctggctcgc tgttgcggcg tctgcggcgg
     1081 gcgcggtctc gcctgtcgcg ggcgcctgcg gcgcggcggt tgtttccggg gccgacgtcg
     1141 cgggctgggt cgcctcggcc ggggcggcgg catcctgggc gaaggccggt gcggcgatca
     1201 cgctcagagc caggatcagc gcctgcgaag atttgttgag cattctcgtg tcttcccttt
     1261 gctcgatgct ttgacgccgc ctagcacgtc cgacgcgctt tgtcaggccg caaccgatcc
     1321 gtcagcgtca cagggcttca ccttggcgtg cgcgtcgcgc cagtggcggc tgacgcaggg
     1381 taaggtgttc ccgacttgtg tcttgcgcgc cgggaccgca gcctgacgca acgggacaat
     1441 cacggctggc acccgggcgc gcgacatgcg aaagggccgc agttttctgc ggcccctgaa
     1501 cgcatttgcg tttgctccct gccggactgg ccggtcatca ttggccgcac gctagtcgcg
     1561 cggccgtgat ccgtcaacag tccagaagga cagtttcgat cacaattcca ccgggctctt
     1621 cgggctgggc tgatgcacgc ctcatccgga cgaaaaaagc cgcgcccgaa ggcgcggcag
     1681 tccaacaggg aggaaggtcc gacgtccacg atcgtgaccc cggacgattc gcatactgac
     1741 acattttcct taagattgta ttgtcgcaac gcacgcagcc tgaactggcg gcggaaaaac
     1801 gcaaaaacgg gggcggggca tgaccggggt gctggacgca gaggcaaata cgatcttcgt
     1861 cggcggcggc ggcccatcct atgccaaccc gcaatccctg ctgatgaaat acgccaaccg
     1921 tcacggcatg atcgccggtg cgaccgggac cggcaagacc gtgaccctgc agacccttgc
     1981 cgaaagcctg tctttggccg gtgtgccggt ctttctgtcg gacgtgaagg gcgacctggc
     2041 cggattgtcg cagtccggca gcgccgaggc ccgactgcac gaggcgttca gcaaacgcgc
     2101 cggtcagatc gggctggac
//
LOCUS       DTVW01001242            2066 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_386875, whole
            genome shotgun sequence.
ACCESSION   DTVW01001242 DTVW01000000
VERSION     DTVW01001242.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2066)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2066)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2066
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_386875"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..379
                     /locus_tag="EYO87_16525"
     CDS             <1..379
                     /locus_tag="EYO87_16525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007204273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="magnesium transporter"
                     /protein_id="HIC67562.1"
                     /translation="SMGGNAGTQTLTVAVRALATKSLTGSNVWRVVRREAIVGVMNGL
                     AFALVMGVVAWFWFDGVSLAAVIGIAMIVNLAVAALAGILIPLALERVGADPALASGT
                     FVTTVTDVVGFFAFLGLASAVLL"
     gene            376..924
                     /locus_tag="EYO87_16530"
     CDS             376..924
                     /locus_tag="EYO87_16530"
                     /EC_number="6.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011747704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-formyltetrahydrofolate cyclo-ligase"
                     /protein_id="HIC67563.1"
                     /translation="MSAAAKAALRARALAARLAGQGDATGITRHLTQALAPHAGAGLA
                     GYWPMRGEADPRPAMMAHSGPLALPVVTGRGVALIFRAWDGGALEPGPYGTAHPPESA
                     PVLTPSVLIVPLAAFDKAGNRIGYGGGYYDRSLQLLRAAGPVCAIGLAFATQELPEIP
                     AEPFDQPLDLIVTDQAIRHPDR"
     gene            1390..>2066
                     /locus_tag="EYO87_16535"
     CDS             1390..>2066
                     /locus_tag="EYO87_16535"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352559.1"
                     /note="Catalyzes the rate-limiting step in dNTP synthesis;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="vitamin B12-dependent ribonucleotide reductase"
                     /protein_id="HIC67564.1"
                     /translation="MKIERRFTTEESGAYGAVDFTMTTSEIRNPDGKIVFRNDQVEVP
                     KGWSQVASDVIAQKYFRKAGVPLLLKRVREKGVPDFLWRSVADTDALEALPESQRYGG
                     ETSARQVFDRLAGAWAYWGWKGGYFSNEEDARAYYDEMRFMLARQMAAPNSPQWFNTG
                     LHWAYGIDGPSQGHFYVDFRTGKLVKSASAYEHPQPHACFIQSVGDDLVNEGGIMDLW
                     VREARLF"
BASE COUNT          354 a          640 c          701 g          371 t
ORIGIN      
        1 ctcgatgggc gggaatgccg gcacccagac cctgaccgtc gcggtccgcg cgctggccac
       61 caaaagcctg accggcagca atgtctggcg cgtggtccgg cgcgaggcga tcgtcggggt
      121 gatgaacggg ctggcctttg cgctggtgat gggcgtggtg gcgtggttct ggttcgacgg
      181 cgtgtcgctg gccgccgtca tcggcatcgc gatgatcgtc aatcttgccg ttgccgccct
      241 tgccggcatc ctgatcccgc tggctctgga acgggtgggc gccgatccgg cgctggcctc
      301 gggcaccttc gtgaccaccg tgaccgacgt cgtgggcttc ttcgccttcc tcggtcttgc
      361 ctcggccgtg ctgctgtgag cgccgccgca aaggccgcgc tgcgggcgcg ggcgctggcc
      421 gcgcggctgg cgggccaggg cgacgcgacg gggatcaccc gccatctgac acaggcgctg
      481 gcgccccatg cgggggccgg gctggcgggc tactggccga tgcgcggcga ggccgatccg
      541 cgcccggcca tgatggccca ttcgggcccg ctggccctgc ccgtggtgac gggcaggggg
      601 gtcgcgctga tctttcgtgc ctgggacggc ggcgcgctgg aacccggtcc ctatggcacc
      661 gcccatccgc ccgaatcggc acccgtcctg acgccctcgg ttctgatcgt gccgttggcc
      721 gccttcgaca aggccggcaa ccgaatcggc tatggcggcg gctattacga ccgcagcctg
      781 caattgctgc gcgccgcggg cccggtctgc gcgatcgggt tggccttcgc gacgcaggaa
      841 ttgcccgaaa tcccggcaga gcccttcgat cagccgctgg atctgatcgt caccgaccag
      901 gcgatccggc atccagatcg ctgaattctg tcattgtggc cttgtcgcat catctgtgca
      961 caacctctgg atgaatcgcg gataaggctg tggaaaagtt ccggataaaa ttccgtatgt
     1021 gattgacgat aaataactta tttggcccct ctgaggggcg gacaacttgc ggcgagcaaa
     1081 gctgtgagcg aatccacggc gacgccgaac cgggtctgtc aacgcccaat ctttcgcgca
     1141 tatggtaaaa aaatagttga aaccgaccaa atctggcgtc agtttgtatt tcacggcgaa
     1201 ggtggcacaa gatgtggtgg cggctgccac cggcaccacg aaacaccggg ccggaccctg
     1261 atcgaaagcc ttgcaggcgc ttgccgcgcc tgactgcctt ctgccgcaag tggaaggctg
     1321 gggatgcatg tccatggtac cggggcaggg gcgcggggac agcgatacga gcatgaacga
     1381 ggggcaggca tgaaaatcga gcggcgtttc accaccgagg aatccggggc ctatggcgcg
     1441 gtggacttca ccatgacaac cagcgagatc cgcaacccgg acggcaagat cgtctttcgc
     1501 aatgatcagg tcgaggtgcc gaagggctgg agccaggtcg ccagcgacgt gatcgcgcag
     1561 aaatatttcc gcaaggccgg cgtgcccctg ctgctgaagc gggtcaggga aaagggcgtg
     1621 ccggatttcc tgtggcgcag cgtggccgat accgatgcgc tggaggccct gcccgaaagc
     1681 cagcgctacg gcggcgagac cagcgccaga caggtctttg accgtctggc cggggcctgg
     1741 gcctattggg gttggaaagg cgggtatttt tccaacgaag aagacgcccg cgcctattat
     1801 gacgagatgc gcttcatgct ggcccgacag atggccgcgc ccaacagccc gcaatggttc
     1861 aataccggcc tgcactgggc ctatggcatc gacggcccgt cgcaggggca tttctatgtc
     1921 gatttcagga ccggcaagct ggtcaagtcg gccagcgcct atgaacatcc ccagccccat
     1981 gcctgcttca tccagtcggt tggcgacgat ctggtgaacg agggcgggat catggatctg
     2041 tgggtccgcg aggcgcgcct gttcaa
//
LOCUS       DTVW01001243            1015 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_389035, whole
            genome shotgun sequence.
ACCESSION   DTVW01001243 DTVW01000000
VERSION     DTVW01001243.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1015)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1015)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1015
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_389035"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..306
                     /locus_tag="EYO87_16540"
     CDS             <1..306
                     /locus_tag="EYO87_16540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009814076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrodipicolinate synthase family protein"
                     /protein_id="HIC67565.1"
                     /translation="QRGADGAMTGFAYPEMMVQVVELCLKGDQDRAEDIFDAYLPLVR
                     YEQQLGLGLAIRKETLRRRGVIASAKLRAPGPSMTQADHDDLTRLVKRLEKRLEELG"
     gene            306..>1015
                     /locus_tag="EYO87_16545"
     CDS             306..>1015
                     /locus_tag="EYO87_16545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_354014.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HIC67566.1"
                     /translation="MDLGLKGKRALVMASSRGLGLGIAQVLAEEGAEVLLSGRSADRL
                     AAQAGAIDAKGRGKAHWVACDLAGNDAADTLAKAVADKLGAADILVANTGGPPPGRMI
                     EADLSGLTTHFNQMVLRVIETADRLLPAMRKAGWGRILAIGSSGVIQPIPTLAVSNTI
                     RSALVGWSKSLSNDLAPEGITVNMLIPGRIHTERVDELDAAAAERGGISIEEARAASA
                     SAIPAGRYGTTEEFAKTAA"
BASE COUNT          174 a          315 c          372 g          154 t
ORIGIN      
        1 cagcgcggcg ccgacggggc gatgaccggg tttgcctatc cggaaatgat ggtgcaggtc
       61 gtggagcttt gcctgaaggg tgaccaggat cgcgccgagg acattttcga cgcctatctg
      121 ccgctggtcc gctacgagca gcagctgggt cttggactgg ccatccgcaa ggaaacgctg
      181 cgccggcgcg gggtgatcgc ctcggccaag ctgcgcgcac cggggccgtc gatgacgcag
      241 gccgatcacg acgacctgac ccggctggtc aaacggcttg agaaacggct ggaggagttg
      301 ggctgatgga tctgggattg aagggcaagc gggcgctggt catggcgtcg tcgcgcgggc
      361 tgggactggg catcgcgcag gtgctggccg aggaaggggc cgaggtgctt ctgtccggcc
      421 gatcggccga caggctggcg gcacaggccg gggcgatcga cgcgaaggga cggggcaagg
      481 cccattgggt cgcctgcgac cttgccggaa acgatgccgc cgacacgctg gcaaaggccg
      541 tggccgacaa actgggggcg gccgacatcc tcgtggccaa cacgggcggt ccgccgcccg
      601 gcaggatgat cgaggccgac ctttcgggac tgaccacgca tttcaaccag atggtgttgc
      661 gggtgatcga gaccgccgac aggctgctgc cggcgatgcg caaggccgga tggggccgga
      721 tccttgccat cggttcgtcc ggcgtgatcc agccgatccc gacgctggcg gtgtcgaaca
      781 cgatccgttc ggcgctcgtc ggctggtcga aatcgctttc gaacgacctc gcgcccgagg
      841 gcatcaccgt gaacatgctg attcccggcc gcatccatac cgaacgggtg gacgaactgg
      901 acgccgccgc cgccgagcgt ggcggaattt cgatcgaaga ggcccgcgcc gcctcggcca
      961 gtgccattcc ggcaggccgc tatggcacga ccgaggaatt cgcaaagacc gccgc
//
LOCUS       DTVW01001244            5244 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_397276, whole
            genome shotgun sequence.
ACCESSION   DTVW01001244 DTVW01000000
VERSION     DTVW01001244.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 5244)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5244)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5244
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_397276"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..536)
                     /locus_tag="EYO87_16550"
     CDS             complement(<1..536)
                     /locus_tag="EYO87_16550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010397655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HIC67567.1"
                     /translation="MFTLATWNINSVRLREGLVARLLRDEAPDILCLQECKSPVEKIP
                     LDQFRALGYGHIVARGQKGYNGVAILSRLPIEDAGDRDYAQLGHARHVAARLENGVVI
                     HNLYVPAGGDIPDREANVKFGQKLDFLTEMRDVFHADNPRRSILVGDLNIAPREDDVW
                     SHKQLLKVVSHTPIEVDHL"
     gene            688..2004
                     /locus_tag="EYO87_16555"
     CDS             688..2004
                     /locus_tag="EYO87_16555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HIC67568.1"
                     /translation="MQITVDEALSRGGTGRFQARLLAIFGLVWAADAMQVIAVGFAAP
                     SVAASFGIERVTAFQIGTVFFLGMFFGAWIFGRLADRIGRRNLLMATVAMDAVFGLAS
                     VFAQDFTWLLVLRFLTGAAVGGTLPVDYAMMAEFLPPRNRGRWLVWLEGFWAIGTIVI
                     ALTAWIAATYGAAAPWRWIFAIAAIPALIGVFLRLWVPESPMYLVRQGRAAEAKAVVD
                     RVLAANGMQTLPAGAELIPAPVPAGAERSIFSAILRMRTIGVMIVWFLVSVSYYGVFV
                     WVPGQLATEGFGFVRGYGFLVILALAQIPGYALAAWGVEALGRRATLMGFLILSAAGC
                     FLFTLASGTAMIAGALILMSFALLGTWGALYAFTPELYPTHLRGTGMGTASAMARLGG
                     ILAPSLLAVVFARGFGFAIGVFAVLLLVAAAALLLVRAETRDTAIG"
     gene            2062..3036
                     /locus_tag="EYO87_16560"
     CDS             2062..3036
                     /locus_tag="EYO87_16560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HIC67569.1"
                     /translation="MGQLVEGVWKDEWYDTDAHGGEFVRDTAKFRNWVTADGTPGPSG
                     EGGFRAESGRFHLYVSYACPWAHRTLIFRALKDLGDHVEVSVVHPDMLAEGWEFREDF
                     PGATGDRLFDEPFLRDIYLRANPQASGRVTVPVLWDRERDTIVSNESADIIRMFNSAF
                     DSVTGNEDDYWPEHLRPRIDEVNGRIYDTVNNGVYKAGFATTQQAYDKAVAPLFDSLD
                     WIEGLLARHRYLTGEMITEADWRLFTTIARFDPVYHTHFKCNRHRIVDYPNLWGWARE
                     LYQWPGIAATVRPDHFVRHYYYSQDMVNPHRIIPIGPDEDWTRPHERG"
     gene            complement(3326..4408)
                     /locus_tag="EYO87_16565"
     CDS             complement(3326..4408)
                     /locus_tag="EYO87_16565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 1 protein"
                     /protein_id="HIC67570.1"
                     /translation="MAKGCAPITRLLLSRRFSSQARVRVLIFHHPNRICWASIYPYFH
                     YAAELADRYGADIRARPLADIHSDKAPAADVILVQPWFTEDMSRLAEAIARYRARHDP
                     DRVVFLDSAAHVDLRAGRDLDPVVDLYLRKALFRDRKMFQKPRLGDTNLTEYYMELHG
                     IPGQVVDRRVPDGLLTRLGLSPNFLVAPHLMPHFLMDRPDTGARPIDLHSRIATGGTP
                     WYQAMRSHAAAVARDMPGIKTTPQERISQPRFLKELRQSKLCWSPFGYGELCWRDIEA
                     FMTGAVLVKPDMSHLDSRPDLYRPNETYLPVRWDFSDFGDVVRQALAQPEILRRIAAT
                     AFDACSDYLAAHRFVEDCAPQLSFAR"
     gene            complement(4594..>5244)
                     /locus_tag="EYO87_16570"
     CDS             complement(4594..>5244)
                     /locus_tag="EYO87_16570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011049109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HIC67571.1"
                     /translation="EEDLREALAEQLVATDDFDVTEAGSGAEAVEASKGAIYDLVVLD
                     VGLPDTDGRELCKKLRKLNVKCPIVMLTGHDTDADTILGLDAGANDYVTKPFKFPVLL
                     ARLRAQLRTHEQSEDAIFQLGPYTFKPAMKMLVDQRDKKIRLTEKETNILKFLYRAQD
                     GVVPRDVLLHEVWGYNAGVTTHTLETHIYRLRQKIEPDPSNARLLVTESGGYRLVA"
BASE COUNT          908 a         1645 c         1696 g          995 t
ORIGIN      
        1 aggtgatcca cctcgatcgg cgtgtggctg acgaccttca gaagctgctt gtgcgaccag
       61 acgtcatcct cgcgcggggc gatgttcaga tcacccacca ggatcgacct gcgcgggttg
      121 tcggcgtgaa agacgtcgcg catttcggtc aggaaatcca gcttctgccc gaatttcacg
      181 tttgcctcgc ggtcggggat gtcgccgccg gcgggcacat acaggttgtg gatcaccaca
      241 ccgttttcca gccgggccgc tacgtggcgc gcatggccaa gctgcgcata atcgcggtcg
      301 cccgcatcct cgatcggcag gcgcgacagg atcgcaacgc cgttatagcc cttttgccca
      361 cgcgcgacga tgtggccata gccaagcgcc cggaactggt ccagcgggat cttctcgacc
      421 ggcgacttgc attcctgaag gcacaggatg tcaggtgcct cgtcacgcag caatctcgcg
      481 accaggccct cgcgcaggcg gaccgaattg atgttccagg tggcaagcgt gaacatggga
      541 tctccttctt cgggcggacc ctagcggcgg cggttgcctg tgtcgagttg gcgccggtga
      601 tgccgcgctg ccgcaatcac cgcttggtga tcggcttccc tagcgttaag aggctgaaaa
      661 gaatgaacgc ggacaagagg gatcgacatg cagatcacgg tggacgaggc gctgtcgcgc
      721 ggtggcacgg gccggtttca ggcccgcctt ctggcgatct tcgggttggt ctgggcggcc
      781 gatgcgatgc aggtcatcgc cgtgggcttt gccgcgccat cggtcgcggc cagtttcggg
      841 atcgaacgtg tgaccgcttt ccagatcggc acggtgttct ttctgggcat gttcttcggc
      901 gcctggatct tcggccgcct cgccgaccgg atcgggcggc ggaacctgct gatggcgacc
      961 gtggcgatgg atgcggtctt tggcctggcc tcggtcttcg cgcaggattt cacgtggctc
     1021 ctggtgctgc gcttcctgac cggcgccgcg gttggcggca ccctgccggt cgattacgcg
     1081 atgatggccg aattcctgcc accccggaac cggggccgct ggctggtctg gctggaaggg
     1141 ttctgggcca tcggcaccat cgtcatcgcg ctgacggcat ggatcgccgc gacctatggc
     1201 gcggcggcgc cctggcgctg gatcttcgcc atcgccgcga tcccggcgct gatcggcgtc
     1261 ttcctgcgcc tctgggtgcc cgaatcgccg atgtatctgg tgcgccaggg ccgtgctgcc
     1321 gaagcgaagg cagtggtgga ccgggtgctg gccgccaacg ggatgcagac tctgccggcg
     1381 ggtgccgaac tgatccccgc accggttccg gccggcgccg agcggtcgat cttttccgcg
     1441 atcctgcgga tgcggaccat cggtgtcatg atcgtctggt tcctggtttc cgtcagctat
     1501 tacggcgtct tcgtctgggt gccgggtcag cttgcgacgg aaggcttcgg cttcgtgcgc
     1561 ggctacggct ttctggtgat cctggcgctg gcgcagatcc ccggctatgc gctggccgcc
     1621 tggggggtcg aggcgcttgg ccggcgtgcc acgctgatgg ggttcctgat cctcagcgcg
     1681 gcgggctgct tcctgttcac cctggcatcc ggcacggcga tgatcgcggg cgcgctgatc
     1741 ctgatgagct ttgcgctgct gggcacctgg ggcgcgctct acgccttcac gcccgagctg
     1801 tatccaaccc acctgcgcgg caccggcatg ggcacagcca gcgccatggc gcggctgggc
     1861 ggcatccttg cacccagcct gctggcggtt gtctttgcca ggggcttcgg ctttgccatc
     1921 ggggtcttcg cggtgctgct gctggtcgct gcggctgccc tgctgctggt tcgcgccgag
     1981 acccgcgaca ccgccatcgg ctgagccgcg aaaccttccg ccgccccggc ccgttctgat
     2041 gccagatcac aggaggacag aatgggccaa cttgtcgaag gcgtctggaa ggacgaatgg
     2101 tatgatacgg atgcgcatgg cggcgaattc gtccgcgata cggcaaagtt ccgcaactgg
     2161 gtgacggcgg acggcacgcc cgggccatcc ggcgagggcg gcttcagggc cgaaagcggg
     2221 cgctttcatc tgtatgtgtc ctatgcctgt ccctgggcgc accggacgct gatcttccgc
     2281 gcgctgaagg acctgggcga tcatgtcgag gtctcggtcg tccatcccga catgctggcc
     2341 gaggggtggg aatttcgcga ggatttcccc ggcgcgaccg gcgacaggct gtttgacgaa
     2401 cccttcctgc gcgacatcta tctgcgcgcc aatccgcagg cgtcgggtcg tgtcaccgtg
     2461 ccggtcctgt gggaccgcga acgcgacacg atcgtgtcca acgaaagcgc cgacatcatc
     2521 cgcatgttca attcggcctt cgattccgtt accgggaacg aggatgatta ctggcccgaa
     2581 catctgcggc cgcgcatcga cgaggtgaac ggccgcatct acgacaccgt caacaatggc
     2641 gtctacaagg ccggtttcgc gacaacgcaa caggcctatg acaaggccgt cgcgcccttg
     2701 ttcgacagtc tcgactggat cgaggggctt ctggcgcggc accgctatct gaccggagaa
     2761 atgatcaccg aggccgactg gcgcctgttc accaccatcg cccgcttcga tccggtctat
     2821 cacacgcatt tcaaatgcaa ccgccaccgc atcgtggatt atccgaacct gtggggctgg
     2881 gcgcgcgagc tttaccaatg gcccggcatc gcggcgacgg tgcggccgga tcatttcgtc
     2941 cggcattact actacagcca ggacatggtg aacccgcacc gcatcatccc catcggcccc
     3001 gatgaggact ggacccggcc gcacgagcgg ggctgatcgg aatcctcgcc cttccggctg
     3061 ccgcggaccc acggagtcac gacagcgacg gaggccgcgt cagagaaaac cccggcgcgg
     3121 gagacgccgg ggttatcaga gagggagggt gtggccgcat ccgccgacca ctgggcttcg
     3181 atgtatgaac gcccgctgca ggcttcggtt ccagaaatga acgatgcgga cgcaatttga
     3241 ccgatctctc tggcggggcg acagacagcg gcaaagattt cgggcaggga acggtcatcg
     3301 gcttgggccg ccagggcaaa gcgcgctacc gggcgaacga caattgcggt gcgcaatcct
     3361 cgacaaatct gtgtgcggca agatagtcac tgcaagcgtc gaacgcggtc gcagcgatgc
     3421 gacgcagaat ctccggctgg gccagtgcct gccggacgac atctccgaaa tctgaaaagt
     3481 cccaccgcac cggcaaatag gtttcattgg gccggtagag gtcgggacgg ctgtccagat
     3541 gagacatgtc cggcttgacc agaaccgcac ccgtcatgaa ggcttcgatg tcgcgccaac
     3601 acaattcgcc atagccaaac gggctccaac acagtttcga ttgacgcaat tccttcagaa
     3661 agcgcggctg gctgattctt tcctgtggtg tggtcttgat tccgggcatg tcccgcgcca
     3721 ccgcggccgc atggctacgc atcgcttgat accagggtgt tcccccggtg gcgatccggg
     3781 aatgcaggtc gatgggccgg gcgcctgtat cggggcggtc catcaggaaa tgcggcatca
     3841 gatgtggtgc caccagaaag ttgggcgaaa ggcccaggcg ggtcagcagg ccgtccggaa
     3901 cacggcggtc cacaacctgt cccggaatgc cgtgaagctc catgtaatat tcggtcagat
     3961 tcgtgtcgcc aagccgcggc ttctgaaaca tcttgcgatc acgaaacaac gccttgcgca
     4021 gatagagatc gaccaccgga tcaaggtcac ggccggcgcg caggtcgaca tgcgcggcgc
     4081 tgtccagaaa aaccacccga tccggatcgt ggcgggcgcg gtatcgggca atcgcctcgg
     4141 ccaggcggct catgtcctcg gtgaaccagg gctgaaccag gatgacgtcc gccgcagggg
     4201 ccttgtcgga atggatatcc gcgagcggcc gggcgcgaat gtcggcacca taacggtcgg
     4261 caagttctgc tgcgtagtgg aaatagggat agatgctggc ccagcatatc cggttgggat
     4321 gatggaagat cagaacccga accctggcct gggatgaaaa ccgtctcgac agcaagagcc
     4381 gtgtgatcgg cgcgcatccc tttgccaaac gtcttgcggc agcgtgggcg cgcacgccat
     4441 gactgataaa acgaaccata ttgaacccat gacctatgca atgccaagca cattggctcg
     4501 ggcgacgtaa actgtcagaa gcaaaatgaa aatggtcatg aaagaaggac cggcgcgcgc
     4561 ggcgccgaat cctgatttca agccggccga tccttacgcg accaaccgat atcctcccga
     4621 ttccgtcacc agaagccggg cattcgacgg gtccggctcg atcttctggc gcaggcggta
     4681 gatatgcgtc tccagcgtgt gggtggtgac gcccgcgttg tagccccaga cctcgtgcag
     4741 cagcacgtcg cggggcacga cgccgtcctg cgcgcgatac aggaacttca ggatgttggt
     4801 ttccttctcg gtcaggcgga tcttcttgtc gcgctgatcg accagcatct tcatcgccgg
     4861 cttgaaggta tagggtccaa gctgaaagat cgcgtcctcg gactgctcat gcgtgcgcag
     4921 ctgcgcccgc agccgggcca gcaggacggg gaacttgaac ggttttgtga cataatcgtt
     4981 cgcccccgca tccagtccca ggatcgtgtc ggcatcggtg tcgtggccgg tcagcatgac
     5041 gatcggacat ttcacgttca gcttgcgcag cttcttgcac aattcgcgcc cgtcggtgtc
     5101 gggcaggccc acgtccagca cgaccaggtc gtagatcgcg cccttgcttg cctcgaccgc
     5161 ctcggcgcca ctgcctgcct cggtcacgtc gaaatcatcg gtcgcgacca gttgctcggc
     5221 cagcgcctcg cgcaggtctt cctc
//
LOCUS       DTVW01001245            1133 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_408212, whole
            genome shotgun sequence.
ACCESSION   DTVW01001245 DTVW01000000
VERSION     DTVW01001245.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1133)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1133)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1133
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_408212"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..559)
                     /locus_tag="EYO87_16575"
     CDS             complement(<1..559)
                     /locus_tag="EYO87_16575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009211181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HIC67572.1"
                     /translation="MRLRIVLTWKRLAGLVALGMAGALFVGWSGLVSIAASSGHWPVT
                     RWFLGWTLENAVATQSTPVEKPEGLDLSDPALIQRSAGNYATSCAACHGAPGVAQSPV
                     VANMVPSPPRLEDSVGDWSDEELFWIVKNGFKYTGMPAWPAQGRDDEVWAQVAFLRAL
                     PDMTAATYADLALGGGVVDDDLEAGG"
     gene            complement(556..933)
                     /locus_tag="EYO87_16580"
     CDS             complement(556..933)
                     /locus_tag="EYO87_16580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020186018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67573.1"
                     /translation="MLGLGKTEDTLWTLIAAPTIWAFHFLFSYTLVAWQCAPNGDPFR
                     DIGGTRAMIGVATLTCLGLIGLILRRAWREWREGGGGFRNDQDTAEAREGFLEFSTLL
                     LAALSFVAVLFETLPIVMIGDCR"
     gene            complement(941..>1133)
                     /locus_tag="EYO87_16585"
     CDS             complement(941..>1133)
                     /locus_tag="EYO87_16585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007068130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67574.1"
                     /translation="AIWTAVHAAVGSLMLGYCLARSVFGRITPRHDADISNVALYWHF
                     MFATALVTVTLLAFFPMLV"
BASE COUNT          227 a          403 c          343 g          160 t
ORIGIN      
        1 gcccgcccgc ctcgaggtcg tcatccacga cgccgccacc gagggcaaga tcggcatagg
       61 tcgcggcggt catgtcgggc aaggcgcgca gaaaggccac ctgcgcccag acctcgtcat
      121 cgcggccctg cgccggccag gcgggcattc cggtatattt gaacccgttc ttgacgatcc
      181 agaacaattc ctcgtcgctc cagtcgccga cgctgtcctc cagccgcggc ggcgacggaa
      241 ccatgttggc cacgaccggc gactgcgcca cgccgggtgc gccatggcag gcggcgcagc
      301 ttgtcgcata attgccggcc gaccgctgga tcagcgccgg atcggacaga tccagcccct
      361 cgggcttttc gaccggcgtt gactgggtgg cgacggcgtt ctccagcgtc cagccaagaa
      421 accagcgcgt caccggccag tgtcccgacg aggcggcgat ggaaaccagc cccgaccagc
      481 cgacaaacag cgccccggcc atgccgagag ccacgaggcc ggccagcctt ttccaggtca
      541 ggacgatcct cagcctcatc ggcaatcccc gatcatgaca atcggcaggg tctcgaacag
      601 caccgccacg aaggacaatg ccgccagcag cagcgtcgag aattcaagaa acccttcgcg
      661 cgcttcggcc gtgtcctgat cgttgcgaaa gccgccgcca ccttcgcgcc attcgcgcca
      721 ggcgcggcgc aggatcaggc cgatcaggcc cagacaggtc agggtggcaa caccgatcat
      781 tgcgcgcgtg ccgccgatgt cgcggaaggg atcgccgttc ggcgcgcatt gccaggccac
      841 cagcgtatag ctgaacagaa agtgaaacgc ccagatcgtc ggcgcggcga tcagcgtcca
      901 tagcgtgtcc tcggtcttgc ccagtcccag catcgccacc tcagaccagc atcgggaaaa
      961 atgccagcaa cgtcaccgtc accagtgcgg tcgcgaacat gaaatgccaa taaagcgcca
     1021 cgttcgagat atcggcgtca tggcgcggcg tgatcctgcc aaagaccgac cgcgccaggc
     1081 aatagcccag catcaggctg cccaccgccg cgtgaacggc ggtccagatc gcc
//
LOCUS       DTVW01001246            3256 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_414726, whole
            genome shotgun sequence.
ACCESSION   DTVW01001246 DTVW01000000
VERSION     DTVW01001246.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3256)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3256)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3256
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_414726"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(51..1097)
                     /locus_tag="EYO87_16590"
     CDS             complement(51..1097)
                     /locus_tag="EYO87_16590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014489646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional transcriptional activator/DNA
                     repair protein Ada"
                     /protein_id="HIC67575.1"
                     /translation="MLDLPEADTLYAALIARDATFEGRALVGVTTTGIFCRLTCPARK
                     PLARNCRWFSRPEDAMAAGFRPCRRCHPAGLSAEGEPLVRDLVARLGADPGRRWSEGD
                     LVSLGFDPSTVRRAFKRHFGQSFLAMARERRILGGMQALKEGSPMIEAQLDAGFESAS
                     GFRNAFARLFGHSPHRWRGPADLRADWIETPLGGMIAIADDRSLHLLEFTDRKALRQG
                     LRRLSAHVGGRIGLGRNAVIDQTQAQLAAYFEGRDPRFSIPVHLHGTDFQQQVWRGLQ
                     RIPAGETRSYAALAGQIGRPSAVRAVARANATNRLALIVPCHRVIGADGRMTGYAGGL
                     WRKEKLIRIEAAYA"
     gene            complement(1165..2139)
                     /gene="meaB"
                     /locus_tag="EYO87_16595"
     CDS             complement(1165..2139)
                     /gene="meaB"
                     /locus_tag="EYO87_16595"
                     /EC_number="3.6.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl Co-A mutase-associated GTPase
                     MeaB"
                     /protein_id="HIC67576.1"
                     /translation="MDELLDGLTGGDRRALSRAITLIESTRADHRAQATDLIARLPER
                     TALRIGLSGTPGVGKSTFIEAFGTMLTGQGMKVAVLAVDPSSARSGGSILGDKTRMER
                     LSRDPKAFIRPTPASRELGGVARRTREAIRLCEAAGYDLVLIETVGVGQSETMVAEMS
                     DLFVLLLAPAGGDELQGVKRGIMEMADLILVNKADGDLLATARRTVADYAGALRLLRK
                     RPQDPEGFPKALPVSAATGDGLDEAWAQIRQLADWRRKNGHFDRNRAQQARHWFMADV
                     RAGLLARLNQPRLRKELDRLGEAVAAGDLPPGLAAARMLDRLHREDGK"
     gene            2357..>3256
                     /gene="serS"
                     /locus_tag="EYO87_16600"
     CDS             2357..>3256
                     /gene="serS"
                     /locus_tag="EYO87_16600"
                     /EC_number="6.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HIC67577.1"
                     /translation="MHDIRAIRDNPDGFEAALQRRGLSGVTEAILALDGERRAKIAEA
                     ETAQAEQNRASKEVGAAKSRGETTEFERLRALVAEKKTDVARMQAEAAALDGRLRDML
                     LGVPNLPLENVPDGADENDNVELHRRGTPRRFDFGPVEHFEIAGVRPGMDFETAAKLS
                     GSRFVMLKGAVARLHRALAQFMLDLHVTRNALQETWTPVLVLEDMMVGTGQLPKFGDD
                     SYQTRDGYWLIPTAEVTLTNIVHGDLVDQASLPRRMVAHSQCFRSEAGSAGRDTTGML
                     RQHQFEKVEMVSITHPEKSREEHD"
BASE COUNT          578 a         1102 c         1092 g          484 t
ORIGIN      
        1 gcggcaccgg cggcgcgccg gccgggatgg gacgcggaaa aagccttgaa tcaggcatag
       61 gcggcctcga tccggatcag cttttccttg cgccacaatc cgcccgcata gccggtcatg
      121 cggccgtcgg caccgatgac gcggtggcag ggcacgatca gggccagccg gttggtcgcg
      181 ttggcacggg ccacggcgcg aacggccgaa gggcgaccga tctgcccggc cagcgccgca
      241 tagctgcgag tctcgccggc cggtattctc tgcaagccgc gccagacctg ctgctggaaa
      301 tcggtgccgt gcagatggac gggtatcgag aagcgcggat cgcggccctc gaaataggcg
      361 gcaagctggg cctgggtctg gtcgataacg gcgttccggc ccagaccgat ccgaccgccg
      421 acatgggccg acaggcggcg cagcccctgg cgcagcgcct tgcgatcggt gaattccagc
      481 agatgcaggg accggtcgtc ggcaatggcg atcatgccgc ccagcggcgt ctcgatccaa
      541 tcggcgcgca gatccgcagg cccgcgccag cgatgcggtg aatggccgaa aagccgggca
      601 aaggcattgc ggaacccgga agccgattcg aatccggcat caagctgtgc ctcgatcatc
      661 ggcgatccct ccttcaacgc ctgcatcccg cccaggatcc gccgctcgcg ggccatggcc
      721 agaaaactct gcccgaaatg ccgcttgaag gcccgacgca cggtcgaggg gtcgaacccc
      781 agtgatacca gatcgccctc ggaccagcgc cgtcccggat cggcgccaag ccgcgccacc
      841 agatctcgga ccagcggttc gccctcggcg ctcagacctg cggggtggca gcgccggcag
      901 ggacggaaac ccgccgccat cgcgtcctcg ggccggctga accagcggca attgcgcgcc
      961 agaggcttgc gcgccgggca ggtcagccgg cagaagatcc cggtcgtggt aacgccgacc
     1021 agggcgcgtc cctcgaaggt cgcatcgcgc gcgatcagcg cggcatagag cgtatcggct
     1081 tcgggcagat ccagcatggc gacatccttt cccctacttt cttctagccg attcggcgcg
     1141 gcttcgggac accaaaacgg gcgtctattt cccgtcctcc cggtgcagac gatccagcat
     1201 ccgcgccgcc gccagacccg gcggcagatc gcccgcggca accgcctcgc ccagcctgtc
     1261 cagttccttt cgcaaccggg gctgattcaa ccgcgccaga aggccggcgc gcacatcggc
     1321 catgaaccag tgacgggcct gctgcgcccg gttccggtcg aaatgcccgt tcttgcgccg
     1381 ccaatcggca agttgccgga tttgcgccca ggcttcgtcc agcccgtcgc ccgtcgcggc
     1441 cgagacgggc agcgccttgg gaaaaccctc gggatcctgc ggtcgcttgc gcagcaggcg
     1501 cagggcgccc gcgtagtcgg cgacggtgcg tcgcgccgtg gccagcaggt cgccatccgc
     1561 cttgttgaca aggatcaggt cggccatctc catgatgccg cgcttgacgc cctgcaattc
     1621 gtcgccgccg gcgggcgcca gcagcagcac gaacagatcc gacatctcgg ccaccatcgt
     1681 ctcggactgg cccacgccga ccgtctcgat caggaccaga tcgtaacctg cggcctcgca
     1741 aagccggatc gcctcgcgcg tgcggcgcgc gacgccgccc agctcgcgac tggcgggcgt
     1801 gggccggatg aaggctttcg ggtcgcgtga cagacgttcc atccgggtct tgtcgccaag
     1861 gatcgagccg cccgaacgcg ccgaagaagg atcgacggcg agaaccgcga ccttcatccc
     1921 ctgtccggtc agcatcgtgc cgaaagcctc gatgaaggtg gattttccga cgccgggcgt
     1981 gcccgacagt ccgatccgca aggccgttcg ttcgggcagc cgcgcaatca gatccgtagc
     2041 ctgcgcgcga tgatccgcgc gcgtcgattc gatcagggtg atcgcgcgtg acaaggcgcg
     2101 ccggtctccg cctgtcaatc cgtcgagaag ttcgtccatg cagcaccgtg gcaggcgggg
     2161 gccgactgcc cccgcacccc cgtggatatt tgcaccaagg caaaatgcca agcgcgcgca
     2221 acgcgccggg catgggatga tgcagcggct ggcggtggcc tgcgggaggt attcgaagac
     2281 cggatcaggc gacgggcttt tgtccggcgc gggcttgggt taggcaaatc tcagacattt
     2341 tgccacggtg agtcccatgc atgacattcg cgccattcgc gacaatcccg acggtttcga
     2401 agccgcgctg caacgacgcg gcctgtcagg cgtgaccgag gccatcctgg ccctcgatgg
     2461 cgagcgcagg gccaagatcg ccgaggccga gacagcgcag gccgaacaga accgcgccag
     2521 caaggaagtg ggcgccgcca aaagccgcgg cgagacgacc gaattcgaac gcctgcgcgc
     2581 gctggtggcc gaaaagaaga ccgatgtggc acgaatgcag gccgaggccg cggcgctgga
     2641 cgggcgcctg cgggacatgc ttctgggggt gccgaacctg ccgctggaga atgtgcccga
     2701 tggcgccgac gaaaatgaca atgtcgaact gcatcgtcgc gggacgccgc gccggttcga
     2761 ctttggcccg gtcgagcatt tcgagatcgc cggtgtccgg cccggcatgg atttcgagac
     2821 ggcggcgaag ttgtcgggca gccgcttcgt gatgctgaag ggcgcggtgg cgcgcctgca
     2881 tcgtgcgctg gcccaattca tgctggatct gcatgtgacc agaaacgccc tgcaagagac
     2941 ctggacgccg gtcctggtgc tggaggacat gatggtcggc accggccaac tgcccaaatt
     3001 cggcgacgac agctatcaga cgcgcgacgg ctattggctg attcccacgg ccgaggtgac
     3061 gctgacgaac attgtccacg gcgatctggt cgatcaggcc agcctgccgc gccgcatggt
     3121 cgcccacagc cagtgtttcc ggtccgaggc gggcagcgca ggccgcgaca ccacggggat
     3181 gctgcgccag caccagttcg agaaggtcga gatggtctcg atcacccatc ccgagaagag
     3241 ccgcgaagag cacgac
//
LOCUS       DTVW01001247            1869 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_41866, whole
            genome shotgun sequence.
ACCESSION   DTVW01001247 DTVW01000000
VERSION     DTVW01001247.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1869)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1869)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1869
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_41866"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            6..455
                     /locus_tag="EYO87_16605"
     CDS             6..455
                     /locus_tag="EYO87_16605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010138581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit epsilon"
                     /protein_id="HIC67578.1"
                     /translation="MADNMQFDLVSPERRLVSVPVREVRLPGTEGDLTAMPGHAPTIV
                     TLRPGIVSVVAEDGAQTDFAVTGGFAEINGESVSLLAERGHPREEMTQDVFNEMMSEA
                     HRKKKAVEEKRDSVGEEVVAAAVKLLADMEAMGSHIGLDPNQSTIPD"
     gene            577..924
                     /locus_tag="EYO87_16610"
     CDS             577..924
                     /locus_tag="EYO87_16610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008031423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67579.1"
                     /translation="MQRISHAAVGVAQGTRLLFSAFEEGGEMWSGAGPRVVRHQIGFE
                     ASFLSPPVVQVTISMWDIAEGSNQRADISAEKISRDGFDIVFRTWGDTRVARIRADWL
                     AIGPLRHVDDFDL"
     gene            complement(987..1766)
                     /locus_tag="EYO87_16615"
     CDS             complement(987..1766)
                     /locus_tag="EYO87_16615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010396073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HIC67580.1"
                     /translation="MSRIHRRHWPGDPERPALALHCMLASGSYWGPIAERLAGHVDLQ
                     GFDMPGHGRSGDWRPGPGDPDYHTAVTRIAASFITRPVDLIGHSMGAVAALRIAVAAP
                     DAVRSLTLIEPVLFAASPDDPAQRARDEDFATAIREGRDADATRAFLRAWGAQSYDAM
                     PEAARVQMRKRIRLIAGLEAAQWHDSAGILRDGALEAIDAPVLLISGAESPPVIHAIA
                     DALAGRLPDVGRANVPGAGHMLPITHPDEVAGLIGVNLDRA"
     gene            complement(1763..>1869)
                     /locus_tag="EYO87_16620"
     CDS             complement(1763..>1869)
                     /locus_tag="EYO87_16620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007426822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="2-hydroxychromene-2-carboxylate isomerase"
                     /protein_id="HIC67581.1"
                     /translation="GAFGAPFYVVPETGQRFWGQDRLDFLDRHLATAG"
BASE COUNT          301 a          613 c          660 g          295 t
ORIGIN      
        1 acaggatggc cgataacatg cagttcgatc tcgtttcgcc cgagcggagg ctcgtctccg
       61 ttccggtgcg cgaggtccgc ctgccgggga ccgaaggcga tctgaccgcg atgcccggcc
      121 acgcacccac catcgtcacg ctgcgtccgg gcatcgtctc ggtcgtggcc gaggatggcg
      181 cgcagaccga tttcgccgtg accggcggct ttgccgagat caatggcgaa tccgtcagtc
      241 tgctggccga acgcggccac ccgcgcgagg agatgacgca ggatgtcttc aacgagatga
      301 tgtccgaggc gcatcgcaag aagaaggcgg tcgaggaaaa gcgcgacagc gtcggcgagg
      361 aagtggtggc tgccgcggtc aagctgctgg ccgacatgga ggcgatgggc agccatatcg
      421 ggctggaccc gaaccagtcg acaatccccg actaggcggc ctccgcgctg tcagtccgaa
      481 ccagacagac gggccccggt cgcagaccgg ggcttttcct tctccgcttg cttggctagg
      541 ctgatcgggc gggcgtggtg aagagggttg atgttgatgc agcgtatcag ccatgcggct
      601 gtcggcgtgg cacagggcac acgtctgctg ttttcggcgt tcgaggaggg cggcgaaatg
      661 tggtcgggcg cgggcccgcg cgtcgtccgc caccagatcg gctttgaagc gtcattcctg
      721 tcgccgcccg tcgtgcaggt gacgatctcg atgtgggaca tcgccgaggg cagcaaccag
      781 cgcgcggaca tctcggccga gaagatcagc cgtgacggtt tcgacatcgt gttccgcacc
      841 tggggcgata cccgcgtggc ccggatccgc gccgactggc tggccatcgg acccttgcgt
      901 cacgtggacg atttcgacct gtagcggacc gtcagaagac agcggaagcg cggtccggcc
      961 gccctggaca cgtgcggatc ggcatgtcag gcccgatcca gattgacgcc gatcaggccg
     1021 gccacctcgt cgggatgggt gatcggcagc atgtggccgg cacccggcac attggcacgg
     1081 ccgacatcgg gcaggcgccc ggccagcgca tcggcaatgg cgtgaattac cggtggcgat
     1141 tccgcgcccg agatcagcag caccggcgcg tcgatcgcct ccagcgcgcc atcgcgcagg
     1201 atgccggcgc tgtcatgcca ctgcgccgcc tccagtcccg cgatcagcct gatccgcttg
     1261 cgcatctgga cccgtgccgc ttcgggcatg gcgtcatagg attgcgcgcc ccaggcccgc
     1321 aggaaagcgc gggttgcatc cgcgtcgcgg ccttcccgga tcgccgtggc gaaatcctcg
     1381 tcgcgggccc gttgcgcggg atcgtccggg ctggcagcga acagcaccgg ctcgatcagg
     1441 gtcaggctgc ggaccgcatc gggggccgcg accgcgatgc gcagggccgc gaccgcgccc
     1501 atgctgtggc cgatcagatc cactggccgg gtgatgaagc tggcggcgat gcgggtgacg
     1561 gcggtatggt agtcgggatc gcccgggccg ggccgccaat cgccgctgcg cccgtggccg
     1621 ggcatgtcga agccctgcag atcgacatgg ccggccagcc tttctgcgat cggaccccaa
     1681 tagctgccgc tggccaacat gcaatgcagt gccagggcgg ggcgttcggg gtcacccggc
     1741 caatgcctgc gatggatgcg gctcatccgg ccgtggccag atgccggtcc aggaaatcca
     1801 gccggtcctg tccccagaac cgttgcccgg tctcgggcac gacatagaag ggcgcgccaa
     1861 aggccccgg
//
LOCUS       DTVW01001248            2576 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_419536, whole
            genome shotgun sequence.
ACCESSION   DTVW01001248 DTVW01000000
VERSION     DTVW01001248.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2576)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2576)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2576
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_419536"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(573..1658)
                     /locus_tag="EYO87_16625"
     CDS             complement(573..1658)
                     /locus_tag="EYO87_16625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008887665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HIC67582.1"
                     /translation="MKRLLTSAALTVAMVAPAMAEKWTMTSVWPSSLELIEIDKHWVE
                     TVKKLVDPDKLTIEFYDGGSLVPAGEVFGAVESGTIQAGADWPGYWAGRDAAFSPLAT
                     TSSLFNAVDYINWITEWGGQEMYDETYGRFGMVYLPYGVTNNESGFRTVNKPISKIED
                     LQGMRLRLSGLEQGRLLEKLGGSQVSIAGGEIYQSLERGVVDGAEFSTPNVDFSGGFQ
                     QVTKYWSTPGWHQSSSVFGVMINKAAWDALDEQTQEQLRVAAESTMLWSLSFTEKRAT
                     EAYAKFQDAGIEITRMDDASLEKIQQTANETIQEVACENPTAAKVYASQIEYLENYAL
                     WRDASVPFNLGRTPKGPDLAAIQECAK"
     gene            complement(1697..>2576)
                     /locus_tag="EYO87_16630"
     CDS             complement(1697..>2576)
                     /locus_tag="EYO87_16630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009458431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HIC67583.1"
                     /translation="GCLGILIPPSIMVILMASYAPGLSVGQLFAGAMIPGILLGMMYA
                     VYVVIIAWLKPEWAPPIRDEEQISRSAMWRMLIVEAVPPLILILGILGSLLAGIATAT
                     EASAIGAVLALLIVIARRRFGWATFYSALLETGRTSAMILFIVVGATAFTGVFNITGG
                     LRASQDLMRGLASDPYTLIAAMLVAVFILGMFLDWTGIVLLSFPIFLPLVAEMNVDPL
                     WFVVLMAVVLQTSFLSPPFGYALFYMRAISPPEITTGDIILGVLPFIILIVMMCALII
                     VFPSLVTWLPAAIYGG"
BASE COUNT          541 a          808 c          739 g          488 t
ORIGIN      
        1 cacccgatac cttggcacat tgatgccgtc ggggggcgtc caccccatcg cttacgatcg
       61 gaagcagttt cgtcgagatg catgcgccac agatcctgat aggccacctg cgcgattcga
      121 gaatcggata tgacggtcat gggcgccctc aagtctgtgt gcatcacagc tataattgct
      181 gcactctagc gcaagtgtgc agcaggaatt ttttcgctgc acatgattca acgcttgttg
      241 cttcgctgac tcgtcgacaa gcgaatatct caaggcacct tattccgtcc ggtggcgtcc
      301 ggcaccgaag gaatgaccca ctccctggca gggcagtggg tcctgttttg cgaaactccc
      361 tcgaccgatg ccatagccga tccgagatgg gcgcagatag gcaaagaggc cgatcatgaa
      421 accgatacga tagcttgacc cggcggaaag ccggtcgaaa atccgggact acctcttctg
      481 aagccgcatg gaccgtcatc gatccggtgc aacgctcggc acgccggagc atttagtccg
      541 gtgtgccgag cgcctcccgt tcacgggaag ggctacttgg cgcattcctg aatggcagcc
      601 agatcgggtc ccttcggcgt gcgtcccagg ttgaacggaa ccgaggcgtc ccgccacaga
      661 gcataatttt ccagatactc gatctggctg gcatacacct tggctgcggt cgggttctcg
      721 caggcgacct cctgaatggt ctcgtttgcg gtttgctgaa tcttctccag cgaggcatcg
      781 tccatccgcg tgatctcgat ccccgcatcc tggaactttg cataggcttc ggtggcccgc
      841 ttttcggtga atgacaggct ccacagcatg gtggattcgg cggcaacgcg cagctgttcc
      901 tgcgtctgtt cgtccagcgc gtcccaagcc gccttgttga tcatcacccc gaagacagag
      961 gatgactggt gccagcccgg cgtcgaccag tatttggtga cctgctggaa accccccgag
     1021 aaatcgacgt tgggggtcga gaactcggct ccgtccacca cgccgcgttc aagcgactga
     1081 tagatctctc caccggcgat gctgacctgg ctgccgccca gcttttccag cagacgaccc
     1141 tgttcaaggc cggacaggcg cagccgcatg ccttgcagat cctcgatctt gctgatcggc
     1201 ttgttgaccg tgcgaaagcc ggattcgttg ttggtcacgc catagggtag atagaccatg
     1261 ccgaacctgc cataggtctc atcatacatt tcctggccgc cccattcggt gatccaattg
     1321 atgtaatcga cggcgttgaa caggctcgac gtggtagcca gcggcgagaa tgcggcatcg
     1381 cgcccggccc agtagcccgg ccagtccgcg cctgcctgga tcgtgccgct ttcgacggca
     1441 ccgaagactt cgcccgccgg aacgaggctg ccgccgtcat agaattcgat cgtcagcttg
     1501 tcgggatcga ccagcttctt gaccgtctcg acccagtgct tgtcgatctc gatcagttca
     1561 aggctggacg gccagaccga cgtcatggtc catttctcgg ccatcgcggg tgccaccatt
     1621 gcaaccgtca acgcggcgct tgtcagaagt cttttcatgt attcctctcc cattgaaaaa
     1681 aagtggtggc ggcgtgtcag ccgccataga tcgccgccgg cagccaggtg accagcgacg
     1741 gaaacacgat tatcagcgcg cacatcatga cgatcagaat gatgaacggc aggacgccca
     1801 ggatgatgtc gccggtcgtg atctccggcg gcgatatggc tcgcatgtag aacagcgcat
     1861 atccgaaggg cggcgacagg aagctggtct gcagcaccac cgccatcaac acgacgaacc
     1921 acaagggatc gacgttcatc tcggccacca gaggcaggaa gatcgggaag gacaacaaca
     1981 cgatcccggt ccagtccaga aacattccca ggatgaagac cgcgaccagc atcgccgcga
     2041 tcagcgtata gggatcgctg gccagtccgc gcatcagatc ctgactggcg cgaagcccgc
     2101 cggtgatgtt gaagaccccg gtgaaggccg tggcccccac gacgatgaac aggatcatcg
     2161 ccgatgtccg gccggtttcc aacagcgccg aatagaaggt cgcccatccg aaccggcgac
     2221 gcgcgatcac gatcagcagg gccaacacgg ccccgatggc gctggcctcg gtcgcggtgg
     2281 cgatccctgc gagcagcgat cccaagatgc ccaggatcag gatcagcggc ggcaccgctt
     2341 cgacgatcag catccgccac atcgcgctac ggctgatctg ttcctcgtcc cggatcggcg
     2401 gagcccattc gggcttcagc caggcgatga tgacgacata gaccgcatac atcattccca
     2461 gaagaatacc cggaatcatc gcacccgcaa acaactggcc caccgacagg ccgggcgcat
     2521 aggatgccat caggatcacc atgatcgagg gcggaatcag gatgccaaga cagccc
//
LOCUS       DTVW01001249            1832 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_421828, whole
            genome shotgun sequence.
ACCESSION   DTVW01001249 DTVW01000000
VERSION     DTVW01001249.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1832)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1832)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1832
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_421828"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            281..1639
                     /locus_tag="EYO87_16635"
     CDS             281..1639
                     /locus_tag="EYO87_16635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67584.1"
                     /translation="MKKPEESKATKSDKPSTRKAAETSQPDQTPGTATSQPADKPDDT
                     PDGGAAGSARKAAATPGTLKSTDTGKGDGSSAAAAGSTAGPVASQLVGDGSSDTPAAQ
                     PKRKQSDPGPTGALKDVPPEAILRDTPVADPTPTQNVTVRKTGFWQMLLGGACAAALG
                     ALAAIWVWPQTPAEAVDTASIRAEAVAAAKEAAGTEIAALRDELASAAPAPDTNAQAA
                     VEALQQQLDEQAQRLDELAARPALDPGMAQRIQDLAAQAQALEGQIQAAAEQAQSRIT
                     AAQSEAEKMQAAATDSTRRAEAVAAIASLQAALDRGVTPDEARQTLEGAGMDAPEPLT
                     REVPSLVSLQSDFPQAARAALRDSLREAGADGGNALTRFFRAQTGARSVAPRAGDDPD
                     AILSRANAEVEKGRIDAALTEMAALPESAKFAPAMAGWLTRAQTYADAKAALNALSAP
                     SN"
     gene            1649..>1832
                     /locus_tag="EYO87_16640"
     CDS             1649..>1832
                     /locus_tag="EYO87_16640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="heme biosynthesis protein HemY"
                     /protein_id="HIC67585.1"
                     /translation="MILSLLKILFFFAVVLAVALGAIQLSDTGQTLLLEYGGREYALT
                     PLKALIALILLMITAWI"
BASE COUNT          313 a          617 c          655 g          247 t
ORIGIN      
        1 gatcggccgc actggcggct gcggcggtcc gtggttcgat gtcgcggttg tggccggtgg
       61 cgatcagcgc gacggtgatg caggcctggg acggaccgcg ggcggggtcg gcgattgcgc
      121 aacagccgac gcaggagggc atggtccagg cgatccgctg cctcggcatc gcggaactat
      181 gatgttcacg gcgggttgag ccgggggcca cggctgatta ctctggcggc gacgcttcgc
      241 cgatggcagg tagggcggca cgcgaggacg gggacgacac gtgaaaaaac cagaagaatc
      301 caaagccacg aaatccgaca agcccagcac ccggaaggcc gcagagacat cacagcccga
      361 tcagaccccc ggcacggcga cgtcgcagcc tgccgacaag ccagacgaca cgccagatgg
      421 cggcgcggcc ggtagcgcac gcaaggccgc cgcgacgccc ggcacgctga aatccaccga
      481 caccggcaag ggggacggat cgtccgccgc cgccgctggc agcacggccg ggccggttgc
      541 ctcgcagctt gtcggcgatg gctcgtccga tactccggct gcgcagccga agcggaaaca
      601 gagtgatccg ggtccgaccg gcgcgctgaa ggatgtgccg cccgaggcga tcctgcgcga
      661 cacgccggtg gccgacccga ccccgacgca gaatgtcacc gtccggaaga cggggttctg
      721 gcaaatgctg ctgggcgggg cctgcgcagc cgccctcggc gcgcttgccg cgatctgggt
      781 ctggccgcag acgcccgctg aagccgtcga tacggcctcg attcgcgccg aggccgttgc
      841 cgccgcgaaa gaggccgccg gtacggaaat cgcggctctg cgcgacgaac tggccagtgc
      901 tgcgcccgcc cccgacacga atgcgcaggc ggctgtcgag gccctgcaac agcagcttga
      961 cgaacaggcg cagcggctcg atgaactggc ggcgcgaccg gcactggatc ccggcatggc
     1021 gcagcggatt caggatctgg ccgcgcaggc ccaggcgctg gaagggcaaa ttcaggccgc
     1081 cgccgaacag gcgcaatccc ggatcaccgc cgcccagagc gaggcggaga agatgcaggc
     1141 cgccgccacc gacagcacca gacgcgccga ggcggtcgcg gcgatcgcgt cgctgcaggc
     1201 ggctctggac cgcggcgtca cgccggacga ggcgcggcaa acgctggagg gtgcggggat
     1261 ggatgcgccc gagccgctga cccgcgaggt gcccagtctc gtcagtcttc agtccgattt
     1321 tccgcaggcc gcgcgcgctg cgctgcgcga cagcctgcgc gaagccggtg ccgatggcgg
     1381 caatgcgctg acccgtttct tcagggcgca gaccggcgcg cgttcggtcg cgccgcgcgc
     1441 gggcgacgat cccgatgcga tcctttcgcg cgcgaatgcc gaggtcgaga agggccgcat
     1501 cgacgccgcc ctgaccgaga tggcggcttt gcccgaatcg gcgaaattcg cacccgcgat
     1561 ggccggctgg ctgacgcgcg cgcaaaccta tgccgatgcc aaggccgcgt tgaacgctct
     1621 gtccgcgccg tcgaactgag gaaccgtgat gatcctgtcc ctgctgaaaa tcctgttctt
     1681 cttcgcggtg gtgctggcgg tcgcgcttgg tgcgatccag ttgtccgata ccggccagac
     1741 actgttgctg gaatatggcg gcagggaata tgccctgacg cccctcaagg cgctgatcgc
     1801 gctgatcctg ctgatgatca cggcctggat cc
//
LOCUS       DTVW01001250            5311 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_423690, whole
            genome shotgun sequence.
ACCESSION   DTVW01001250 DTVW01000000
VERSION     DTVW01001250.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 5311)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5311)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5311
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_423690"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..148
                     /locus_tag="EYO87_16645"
     CDS             <1..148
                     /locus_tag="EYO87_16645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010391811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="2-octaprenyl-6-methoxyphenyl hydroxylase"
                     /protein_id="HIC67586.1"
                     /translation="SDNPLLRAARGIGMGMVTAIPALRRGFMRQAAGLSVDPMPRLLT
                     GQPL"
     gene            214..1110
                     /locus_tag="EYO87_16650"
     CDS             214..1110
                     /locus_tag="EYO87_16650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009828359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HIC67587.1"
                     /translation="MDIRAILMGLAFAIMWASAFSSSRMIVLEAPPLLALALRFAISG
                     AIGVAIARAMGQDWRGLTRTQWRAVVVLGLCQNALYLGLNWVAMQWIEAGLASIIAAT
                     MPLLVAFFGWIVMGERLRPTGVAGLVLGLVGVAIIMGARLQGGSDPFGIALGFVASLA
                     LAIATLSVRGASSGGNVMMIVGLQMLVGAAALGLIAPFIETWDATITPRLAVAFFYTV
                     LVPGLLATWVWFELVRRIGAVRAATFHFLSPFFGVTIGAVLLGESLGISDVIGVAIIM
                     AGILAVQLSRQPPPVRRPPPAA"
     gene            complement(1161..2549)
                     /locus_tag="EYO87_16655"
     CDS             complement(1161..2549)
                     /locus_tag="EYO87_16655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HIC67588.1"
                     /translation="MDFFDRFRAALGAPETLHDSMIGRDAVIEGPFGPRRMIYADHVA
                     SGRALLPVEHAILRDVLPWYANSHTEASHCGAMMTRLRRAARAEILRCTGGGPEHAVI
                     FAGSGATAGINRLVHLFGVGPGWTVLIGPYEHHSNILPWRESGARVVEIPEAQGGGPD
                     LAALGAELAAGGPVMGAFSAASNVTGALTDVAAVTRLFRQAGARIVWDYAGGAPYLPI
                     DMGLGMDAVVASPHKFIGGPGASGVLILRRDAVVADRPSLPGGGTVRFVNAEGHDYAA
                     SVETREEAGTPNVVGDIRAAMVFALKDAVGQEWIDARHAMWLRKAARLRDVPGLQMLG
                     NPAAARLPILSFRIRDGRGGFVHQQLATRMLSDLHGVQARGGCACAGPYVHRLLGIGA
                     AESRRLRTAILRGDEIEKPGFVRLNLCWAAPEAEIDAILSAMTDLARHAAEHLHRYRC
                     DPATAIFTPVAA"
     gene            2641..3117
                     /locus_tag="EYO87_16660"
     CDS             2641..3117
                     /locus_tag="EYO87_16660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016555928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HIC67589.1"
                     /translation="MNEQTPQFDDIDHRILAALQQDATLSQRALADRIGLSQNACWRR
                     LQKLTDAGVLKGSRALIDAGRAGLHLTVFVMIRTRHHDDAWARRFRARVESIPEITEF
                     HRIGGEWDYMAKLVTTSMAGYDLCYKALIADMDLERVTGVFSMETIFEGRPLRLPR"
     gene            3148..4140
                     /locus_tag="EYO87_16665"
     CDS             3148..4140
                     /locus_tag="EYO87_16665"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011746758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ligase-associated DNA damage response
                     exonuclease"
                     /protein_id="HIC67590.1"
                     /translation="MRADQILHPTEAGLYCPPGDFFIDPIRPVPRALITHGHGDHARA
                     GHGAVMATRQTLDIMAIRYGTDFARTRQVAEGPLRVGDTQVSFHPAGHILGSAQIAVQ
                     PGAGPKIVVSGDYCRRANPVCAPFEPVPCDVFVTEATFGLPVFRHPDPAQEMARLLAS
                     MAEFPDRPHLIGAYALGKAQRLIALARAAGIDGPIAIHGALQRLCDYHIEQGIALGAL
                     IPATAEDVPAHLVIAPPSAFASPWVQRFRDPVIGFASGWMQVRARARQRGVELPLVVS
                     DHVDWPQVTATIRELSPSEVWITHGAEEGLLRWCELQGIPARPLRLVGYEDEPE"
     gene            4137..>5311
                     /locus_tag="EYO87_16670"
     CDS             4137..>5311
                     /locus_tag="EYO87_16670"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010398483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cisplatin damage response ATP-dependent DNA
                     ligase"
                     /protein_id="HIC67591.1"
                     /translation="MKAFAHLLERLAFTPARNAKLRLLRHYLETTPDPDRGYALAALT
                     GDLKLRAVTPSLLRGLMAERVDDQLFALSYDFVGDLAETIALLWQGDGDQDVPLHEAV
                     TLLSDTGKAGLPAAIAAMLDRLGPSQRLAFLKLATGNMRVGLSARLARIALAEMGEPE
                     VADIEEIWHGLKPPYRPLFDWIAGGARPEHAARAPFRPVMLSTPVDLDQLRGFDPDEY
                     MAEWKWDGIRVQAINDGGVRRLYSRTGEDIGAAFPDVIEALNFDGAADGELLVRRDGE
                     VAVFGDLQKRLNRKAISRAMLDSHPAGLRLYDLMIWQGRDLRGLPLAERRAVLDGADF
                     GSDRIDVSPLLDFATWDDLAALRADPPSAVIEGVMIKRRVSPYVGGRPRGPWFKWKR"
BASE COUNT          761 a         1857 c         1817 g          876 t
ORIGIN      
        1 cagcgacaat ccgctgctgc gcgcggcgcg gggcatcggg atgggcatgg tgacggccat
       61 ccccgcgctg cggcgcggtt tcatgcggca ggcggcgggc ctgtcggtcg atccgatgcc
      121 gcggctgctg accggccagc cgctataggc accctttccg ccgcctgcgc cctctgctag
      181 cggtgttgca tcatctgcac gggaaggccg gccatggaca ttcgcgcgat cctgatgggg
      241 ctggccttcg cgatcatgtg ggcctcggcc ttcagttcca gccggatgat cgtgctggag
      301 gcgccgccct tgctggcgct ggcgctgcgc tttgcgatct cgggcgcgat cggcgtggcc
      361 atcgcgcggg cgatgggcca ggactggcgc gggctgacgc ggacgcaatg gcgcgcggtg
      421 gtggtgctgg gcctgtgcca gaacgcgctg tatctgggcc tgaactgggt cgcgatgcag
      481 tggatcgagg cgggcctcgc ctcgatcatc gccgccacca tgccgctgct ggtcgccttc
      541 ttcggctgga tcgtgatggg cgaaaggctg cgaccgacgg gggtcgcggg gctggtgctg
      601 ggtcttgtcg gcgttgccat catcatgggg gcgcggttgc agggcggcag cgatccgttc
      661 ggcatcgccc tgggcttcgt ggcctcgctg gcgctggcca tcgccacgct cagcgtgcgg
      721 ggcgccagtt cgggcggcaa cgtgatgatg atcgtgggct tgcagatgct ggtcggcgcc
      781 gccgccctgg gcctgatcgc cccgttcatc gagacatggg acgccaccat cacgccccgg
      841 cttgccgtgg ccttcttcta taccgtgctg gtgccgggcc ttctggcgac ctgggtctgg
      901 ttcgagctgg tccgccggat cggcgccgtc cgggccgcga cgttccattt cctcagcccg
      961 ttcttcgggg tgaccatcgg tgcggtcctg ctgggcgaaa gccttgggat cagcgacgtg
     1021 atcggcgtcg cgatcatcat ggcgggaatc cttgcggtgc agctgtcgcg ccagccgccc
     1081 ccggtcagac ggccgccgcc ggcggcctag tcgccggtct ttgcgccatc gcgcccggcg
     1141 cggtggccgt gaccccgccc tcaggccgcg acgggcgtga agatggcggt cgccggatcg
     1201 cagcgatagc ggtgcaggtg ctccgcggca tggcgggcca ggtcggtcat cgcggacagg
     1261 atcgcgtcga tctcggcctc gggggcggcc cagcacaggt tcagccgcac gaagccgggc
     1321 ttctcgatct cgtcgccgcg caggatcgcg gtccgcagcc gccgcgattc cgccgcaccg
     1381 atccccagca ggcggtgcac atagggcccg gcgcaggcgc agccgccccg tgcctgaacg
     1441 ccatgcagat ccgacagcat ccgcgtcgca agctgctggt gcacgaagcc gccgcggccg
     1501 tcgcggattc gaaacgacag gatcggcagc cgcgccgccg ccgggttgcc cagcatctgc
     1561 aggcccggca cgtcccgaag ccgcgccgcc ttgcgcagcc acatcgcgtg gcgcgcatcg
     1621 atccactcct gcccgaccgc atccttcagc gcaaagacca tcgccgcgcg gatatcgccc
     1681 acgacattcg gcgtgccggc ctcctcgcgc gtctcgacgg atgccgcata atcgtgaccc
     1741 tcggcattca cgaaacgcac cgtgccgccg cccggcaggc tggggcggtc cgcgaccacc
     1801 gcgtcgcggc gcaggatcag cacgcccgat gcccccggcc cgccgatgaa cttgtgcgga
     1861 gaggcgacga ccgcatccat ccccaaaccc atgtcgatcg gcagataggg cgcgccgccc
     1921 gcataatccc agacgatccg cgcgcccgcc tgccggaaca gccgggtcac cgccgccacg
     1981 tcggtcagcg cgccggtcac gttcgaggcc gccgaaaagg cacccatcac cggcccgccc
     2041 gccgccagtt ccgcgcccag cgccgcaagg tccggcccgc cgccttgcgc ttcggggatc
     2101 tcgaccacgc gcgcgccgct ttcgcgccat ggcaggatat tggaatgatg ctcgtagggg
     2161 ccgatcagca ccgtccagcc gggcccgacc ccgaacaggt gaaccagccg gttgatcccc
     2221 gccgtcgcgc ccgacccggc aaagatcacc gcatgttccg gcccgccgcc cgtgcagcgc
     2281 aggatctcgg cccgcgcggc gcggcgcagg cgggtcatca tggcgccgca atggctggcc
     2341 tcggtatggc tgttggcata ccagggcagc acatcgcgca ggatcgcgtg ttccaccggc
     2401 aaaagcgccc gccccgaggc gacgtgatcg gcatagatca tccgccgcgg cccgaacggc
     2461 ccctcgatca ccgcgtcgcg gccgatcatg ctgtcatgca gggtctctgg cgcccccagg
     2521 gcggcccgga accggtcgaa gaaatccatg ctcatcaccc ttcctttccg ccaaggatga
     2581 cacggaaaga tgcagaattt gatttcttcg ttgtggaaat acccctaatc tgacgttcag
     2641 atgaacgaac agacgccgca attcgacgat atcgaccacc gcatcctcgc ggcgctgcaa
     2701 caggatgcga cgctgtcgca gcgcgccctg gccgaccgca tcggcctgtc gcagaatgcc
     2761 tgctggcggc ggctgcagaa gctgaccgac gcgggtgttc tgaaaggcag ccgggcgctg
     2821 atcgatgccg gccgggcggg cctgcacctg accgtcttcg tgatgatccg cacccgccat
     2881 cacgatgacg cctgggcgcg acgctttcgt gcccgtgtcg aatcgatccc cgagatcacc
     2941 gaatttcacc ggatcggcgg cgaatgggac tacatggcca agctggtgac gacctcgatg
     3001 gccggctacg atctttgcta caaggcgctg atcgccgaca tggatctgga acgcgtcacc
     3061 ggcgttttct cgatggaaac catcttcgag ggccggccgc tgcgcctgcc gcgttgattt
     3121 tcacgatatg ttcgccatct tggacccatg cgcgccgacc agatcctgca cccgaccgaa
     3181 gccgggcttt actgcccgcc cggcgatttc ttcatcgacc cgatccgccc ggttccccgc
     3241 gcgctgatca cgcatggcca tggcgatcat gcccgcgcgg gacatggcgc ggtcatggcc
     3301 acgcgccaga cgctggacat catggcaatc cgctatggca cggattttgc ccggacgcgg
     3361 caggtcgccg aaggcccgct gcgggtcggc gacacccagg tcagctttca tccggccggg
     3421 catatcctcg gctcggccca gatcgcggtg cagccgggcg cggggccgaa gatcgtcgtc
     3481 tcgggcgatt actgccgccg ggcgaacccc gtctgcgccc cgttcgagcc ggttccctgc
     3541 gatgtcttcg tgaccgaggc gacctttggc ctgccggtct tccgccatcc cgatccggcg
     3601 caggaaatgg cccgccttct ggccagcatg gccgaatttc ccgaccgccc gcacctgatc
     3661 ggcgcctatg cgctgggcaa ggcgcagcgg ctgatcgcgc tggcccgcgc ggccgggatc
     3721 gacgggccca tcgccattca cggcgccttg cagcggttgt gcgattacca catcgaacag
     3781 ggaatcgcgc tgggcgcgct gattcccgcc accgccgagg acgtgcccgc gcacctggtc
     3841 atcgcgccgc cctcggcctt tgccagcccc tgggttcagc gcttccgcga cccggtgatc
     3901 ggctttgcct cgggctggat gcaggtccgc gcgcgggcgc gccagcgggg cgtggaactg
     3961 ccgctggtcg tcagcgatca cgtggactgg ccgcaggtca cggcgacgat ccgcgagctg
     4021 tccccgtccg aggtctggat cacccacggc gccgaggaag gcttgctgcg ctggtgcgaa
     4081 ttgcagggca tccccgcccg cccgctgcgc cttgtgggct atgaggacga gccggaatga
     4141 aggcgttcgc gcatctgctg gaacggctgg cctttacccc cgcccgcaac gccaagctgc
     4201 ggctgctgcg gcattatctg gaaaccacgc cggatcccga tcgcggctat gccctggccg
     4261 cgctgaccgg cgatctgaag ctgcgcgccg tcacccccag cctgttgcgc gggctgatgg
     4321 cagagcgggt ggatgaccag cttttcgcgc tgtcctacga tttcgtcggc gatctggccg
     4381 agacgatcgc gctgctgtgg cagggcgacg gcgatcagga cgtgccgttg cacgaggcgg
     4441 tgacgctgct gtcggatacc ggcaaggccg ggctgcctgc tgccatcgcc gcgatgctgg
     4501 accggctggg cccgtcgcag cggctggcgt ttctgaagct ggccaccggc aacatgcgcg
     4561 tcgggctgtc cgcgcgcttg gccaggatcg cgctggccga gatgggcgaa cccgaggtcg
     4621 ccgatatcga ggagatctgg cacgggctga agccgcccta ccggccgctg ttcgactgga
     4681 tcgcgggcgg ggcgcggccc gaacatgccg cccgcgcgcc gttccggccg gtcatgctgt
     4741 ccacgccggt cgatctggac cagcttcgcg gcttcgatcc ggacgaatac atggcggaat
     4801 ggaaatggga cggcatccgc gtgcaggcga tcaatgacgg cggggtgcgc aggctgtatt
     4861 cccgcaccgg cgaggatatc ggcgccgcct ttcccgatgt gatcgaggcg ctgaatttcg
     4921 atggtgcggc ggatggcgaa ttgctggtgc gccgcgacgg cgaggtggcg gtgttcggcg
     4981 atctgcaaaa gcggctgaac cgcaaggcga tcagccgcgc gatgctggac agccacccgg
     5041 ccgggctgcg cctttatgac ctgatgatct ggcagggccg cgatctgcgc ggcctgcccc
     5101 ttgccgaacg ccgcgcggtg ctggacggcg cggatttcgg cagcgaccgg atcgatgtct
     5161 cgccgctgct ggatttcgcc acctgggacg atctggccgc cttgcgcgcc gacccgccaa
     5221 gcgcggtgat cgagggggtg atgatcaagc gccgcgtcag cccgtatgtc ggcggccggc
     5281 cgcgcgggcc ctggttcaag tggaagcgcg a
//
LOCUS       DTVW01001251            1968 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_425636, whole
            genome shotgun sequence.
ACCESSION   DTVW01001251 DTVW01000000
VERSION     DTVW01001251.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1968)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1968)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1968
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_425636"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(7..1266)
                     /gene="glgC"
                     /locus_tag="EYO87_16675"
     CDS             complement(7..1266)
                     /gene="glgC"
                     /locus_tag="EYO87_16675"
                     /EC_number="2.7.7.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011456235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate adenylyltransferase"
                     /protein_id="HIC67592.1"
                     /translation="MAETKRLNRRAMAFVLAGGRGSRLKELTDRRVKPAVYFGGKTRI
                     IDFALSNAMNSGIRKIAVATQYKAHSLIRHVQRGWNFFRAERNEFMDILPASQRLSEE
                     HWYRGTADAVTQNIDIVDSYDVDYIVILAGDHIYKMDYEVMLREHVESGADVTIGCLT
                     VPRMEATAFGVMAVDTAGRIPSFLEKPADPPGTPDDPDKALASMGIYVFRWDFLRDLL
                     TKDAEDPDSSHDFGNDLIPDIVKNGKAMAHRFDDSCVRAPGAPAYWKDVGTVDAFWQA
                     NIDLTNFTPELNLWDTEWPIWTYSESVPPAKFIHDEKDRRGIAVSSMVSGGCVISGTE
                     IRNSLLFTQVHTNSYASLDHVVALPYVTVHRRARLTKAVVDAGVVIPEGLVVGEDSRE
                     DAKWFRVSEGGVTLITQDMLDRRAASL"
     gene            complement(1291..>1968)
                     /locus_tag="EYO87_16680"
     CDS             complement(1291..>1968)
                     /locus_tag="EYO87_16680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011750654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-alpha-glucan branching enzyme"
                     /protein_id="HIC67593.1"
                     /translation="RKYHHDQMTFGLMYAFSENFVLPISHDEVVHGKGSMLRKMPGDE
                     WQQFANLRAYYGFMWGHPGKKLLFMGCEWGQPEEWNHNGELNWHAAGQPLHKGVQSLV
                     RDLNRLYRETPALHVKDCDAEGFQWIATDPAQSTYAWVRRGGDGDRPVVVLCNFTPVP
                     RDGFRIGVPQKGRWREAINTDAEIYGGSGTGNLGEIQADGPPQDGQPASAEVVLPPLS
                     VVILVAE"
BASE COUNT          356 a          642 c          599 g          371 t
ORIGIN      
        1 cccgcatcaa agagaggccg cccgcctgtc cagcatgtcc tgcgtgatca gcgtgacgcc
       61 gccctcgctg acgcgaaacc atttcgcgtc ctcgcgcgaa tcctcgccca cgacaaggcc
      121 ctcggggatg accacgccgg catccaccac cgccttggtc agccgcgcgc ggcgatggac
      181 ggtcacatag ggcagcgcca cgacgtgatc cagcgaggca taggaattgg tatggacctg
      241 ggtgaacagc agcgaattgc ggatctcggt gcccgagatg acgcatccgc ccgataccat
      301 cgacgacacc gcgatcccgc gccggtcctt ttcgtcatgg atgaacttcg cgggcggcac
      361 gctttcggaa taggtccaga tcggccattc ggtgtcccag aggttcagct cgggggtgaa
      421 attcgtcagg tcgatattgg cctgccagaa ggcgtcgacg gtgcccacat ccttccagta
      481 ggccggcgcg cccggcgcgc gcacacagga atcgtcgaac cgatgcgcca tcgccttgcc
      541 gttcttcacg atgtcgggga tcagatcatt gccgaaatca tggctggaat ccggatcctc
      601 ggcatccttt gtcagcaggt cgcgcaggaa atcccatctg aagacgtaaa tccccatcga
      661 ggccagcgcc ttgtcgggat cgtcgggcgt gcccggcggg tcggcgggct tttcgagaaa
      721 cgaggggatg cgcccggccg tgtccaccgc catcacgccg aaggccgtgg cctccatccg
      781 cggaacggtc aggcagccga tggtgacgtc cgcaccgctt tcgacatgtt cgcgcagcat
      841 gacctcgtaa tccatcttgt agatgtgatc gccggccagg atgacgatgt agtcgacatc
      901 ataactgtcc acgatgtcga tgttctgcgt gaccgcatcg gcggtgccgc gataccaatg
      961 ttcctcggac aggcgctggc tggcgggcag gatgtccatg aattcgttgc gttcggcgcg
     1021 aaagaagttc cagccgcgct ggacgtggcg gatcaggctg tgggccttgt attgcgtggc
     1081 cacggcgatc ttgcgaatgc cggaattcat cgcgttcgac agcgcgaaat cgatgatccg
     1141 ggtcttgccg ccgaaataga cggcgggctt cacgcgccgg tcggtcagtt ccttaagccg
     1201 gcttccacgc cccccggcca gcacgaaggc catcgcgcgg cggttcagtc ttttcgtctc
     1261 tgccatcttc gaaactcccc tcctgaaaac tcactcggcc acgagaatga ccaccgacag
     1321 cggcggcagg acgacctcgg ccgaagccgg ctggccgtcc tgcggcggac cgtccgcctg
     1381 gatctcgccc agattgccgg tgccgctgcc gccgtagatt tcggcgtcgg tgttgatcgc
     1441 ctcgcgccag cggcccttct gcgggacgcc gatcctgaac ccatcgcgcg ggaccggggt
     1501 aaagttgcac aggaccacga ccggcctgtc gccatccccg ccgcgccgga cccaggcata
     1561 ggtcgattgc gccgggtcgg tggcgatcca ctgaaacccc tcggcatcgc aatccttgac
     1621 atgcagcgca ggcgtttcgc gataaagccg gttcagatcg cggaccagcg attgcacacc
     1681 cttgtgcagc ggctgcccgg cggcgtgcca gttcagttcg ccattgtggt tccattcctc
     1741 gggctgaccc cattcgcagc ccatgaacaa cagcttcttg cccggatgac cccacatgaa
     1801 gccgtaatag gcgcgcaggt tggcgaattg ctgccattcg tcgccgggca tcttgcgcaa
     1861 catgctgccc ttgccatgga ccacctcgtc atggctgatc ggcaggacga aattctcgga
     1921 aaacgcatac atcaggccga aggtcatctg atcgtggtga tatttgcg
//
LOCUS       DTVW01001252            1407 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_432625, whole
            genome shotgun sequence.
ACCESSION   DTVW01001252 DTVW01000000
VERSION     DTVW01001252.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1407)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1407)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1407
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_432625"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..545
                     /locus_tag="EYO87_16685"
     CDS             <1..545
                     /locus_tag="EYO87_16685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="BCCT family transporter"
                     /protein_id="HIC67594.1"
                     /translation="YWAWWISWSPFVGMFIARVSRGRTVRQFLIAVLIVPSVISILWM
                     TALGGTAITMTVGGFEGIADAALELKLFQMLGQLPLTSITSFVGIILVIVFFVTSSDS
                     GSLVIDTIAAGGKVNAPIPQRIFWCSFEGLVAIALLLGGGLTALQAMAVSTGLPFTII
                     LLIACWSIVKGLIAERRELA"
     gene            654..1097
                     /locus_tag="EYO87_16690"
                     /pseudo
     CDS             654..1097
                     /locus_tag="EYO87_16690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018000341.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            1295..>1407
                     /locus_tag="EYO87_16695"
     CDS             1295..>1407
                     /locus_tag="EYO87_16695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010392526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapA"
                     /protein_id="HIC67595.1"
                     /translation="MAEVAFTIGHKEYSQVAQDGEERLLQRAASILDAEAQ"
BASE COUNT          226 a          463 c          492 g          226 t
ORIGIN      
        1 tctactgggc ctggtggatc agctggtcgc ccttcgtcgg catgttcatc gcccgcgtca
       61 gccgcggccg gacggtgcgt cagttcctga tcgcggtgct gatcgtgccc tcggtcatct
      121 cgatcctgtg gatgaccgcc ctgggcggca ccgccatcac catgaccgtg ggcgggttcg
      181 agggtatcgc cgatgcggcg ctggagctga agctgttcca gatgctggga caattgccgc
      241 tgacctcgat caccagcttc gtgggcatca tcctggtgat cgtgttcttc gtgacctcgt
      301 cggactcggg cagcctggtc atcgacacga tcgcggccgg tggcaaggtg aacgcgccga
      361 tcccgcagcg catcttctgg tgcagcttcg agggtctggt ggcgatcgcg ctgctgctgg
      421 gcggcggcct gaccgccttg caggccatgg ccgtctcgac cgggcttccc ttcaccatca
      481 tcctgctgat cgcctgctgg tcgatcgtga agggtctgat tgccgaacgg cgagaacttg
      541 cctgaacagg cggcgtcaat cacagtggcg ggcggggttt tccccgcccg ttcttgtttt
      601 atggtccgcg cggtgccaaa accgttgctg acgccaccga aggaccgacg ccgatgagcg
      661 aaatttccgt cagcgaacgc cgcctcagcg ccgcgctgga ccgcatcgac cagatcctcg
      721 aagccggcac cggccgaggc gcgcaatccc cggccacgca gtccgatcag gaccaggcgc
      781 tggccgccgc gcaggccgag gccgaccgtc tggcgcagga actggccgct ctgcgtgccg
      841 atcgcggcgg cccgctggag gcggcattgg ccgaggcgcg ggcccggctg gacggcgccg
      901 gccagcaggc ggctcgcctg gccgccgcga acgaggaact gaccgctgcc aaccgcgcgc
      961 tgatcgacgc cgccgggcag ggtgacgcag atcccgcgat tcggcgcgcg ctggaggccg
     1021 agatcgaatc ccttcgcgcc gcgcgcgagg ccgaattgtc gcagatgggc gatatcatgg
     1081 tcgaactgga acgcctgctg gccgaggatc aggcgcccgc cgcaccggga cagattgtcg
     1141 atccgacgct ggaagccgcg ggggacgaag ccggtgtgcc cgaggcgccc gaagcccggc
     1201 agaccggaaa agacggcctg cccagcgatc acgacgatcg gtccgggaat ggcggggtcg
     1261 cggatgacga tggctttcag gagggaaaca ggtaatggcc gaggtcgcat tcaccatcgg
     1321 gcacaaggaa tacagccagg tcgcccagga cggcgaagag cggctgctgc aacgtgcggc
     1381 ctcgatcctc gatgccgagg cgcagca
//
LOCUS       DTVW01001253            1338 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_4346, whole
            genome shotgun sequence.
ACCESSION   DTVW01001253 DTVW01000000
VERSION     DTVW01001253.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1338)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1338)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1338
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_4346"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            147..860
                     /locus_tag="EYO87_16700"
     CDS             147..860
                     /locus_tag="EYO87_16700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010395667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase"
                     /protein_id="HIC67596.1"
                     /translation="MSEWKARRFWQAATIRPDAAGWQVALDDRLLRTPGKQPLILPTS
                     ALAGAIAAEWDAQKDLIDPATMPLTRAANSAIEKVLPQFAAVAGMLADYGGTDLLSYR
                     ADQPEELIGLQAEGWDPLIDWAATALRAPLRITHGVIPVPQDPEVLARLHQVVIGLDL
                     FGLTALHDLVTLPGSLILGLAVIRGRIDGETAHRLSRIDEDFQISRWGKDDEAAQAAR
                     SRRCALIDAERLWWLSRAG"
     gene            1031..>1338
                     /locus_tag="EYO87_16705"
     CDS             1031..>1338
                     /locus_tag="EYO87_16705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011747133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HIC67597.1"
                     /translation="MKKSLFLGSVAAVTLSAGVGMADTLADVKARGELICGVNTGLVG
                     FAAPDANGNWAGFDIAVCKAVAASVLGDPSKVKYVPTTGQTRFTALSSGEVDLLARNS
                     T"
BASE COUNT          211 a          419 c          483 g          225 t
ORIGIN      
        1 atcgaaatgg cgcgtgcggc cgggatgatg ggctacgggg tctcctgggg gtatcacgga
       61 ccagagggac tggtggcatc gggggccgcg ctggtcgccg ccgatttcgc cgcgctgacc
      121 cgggcgatcg aggcttgggc cgcggcatga gcgaatggaa ggcacgccgc ttctggcagg
      181 ccgcgacgat ccggcccgac gccgcgggat ggcaggtcgc gctggacgac cgcctgctcc
      241 ggacgcccgg caagcaaccc ctgatcctgc cgaccagcgc gctggccggc gccattgctg
      301 ccgaatggga tgcgcagaag gatttgatcg accccgcgac gatgccgctg acccgcgcgg
      361 ccaattccgc catcgagaag gttctgccgc aatttgctgc ggtggcgggg atgctggccg
      421 attacggggg cactgacctc ttgtcctatc gcgccgacca gcccgaggaa ctgatcggat
      481 tgcaggccga gggctgggat ccgctgatcg actgggcggc aaccgcgttg cgcgcgccgc
      541 ttcggatcac ccatggcgtg atcccggtgc cgcaggatcc cgaggttctg gcgcgcctgc
      601 atcaggtcgt gatcgggttg gacctgttcg ggctgacggc attgcacgat ctcgtgacgc
      661 tgccgggatc gctgatcctg gggctggcgg tgatccgggg caggatcgac ggcgagacgg
      721 cgcatcgcct gtcgcgcatc gacgaggatt ttcagatcag ccgctggggc aaggatgacg
      781 aggccgcgca agccgcgcgg tcgcgacgat gcgcattgat cgacgccgag cggctgtggt
      841 ggctgtctcg cgccggttga aagccgctgc gtcaccttgc gatccgcttg acctgttagc
      901 gttgatcggc acaataccgc ccatcatggg ccgttcatcc gaccggcccg gtgggaatgc
      961 gggctgcctc ggcggctcca acagccgacc ggccgagaat ggcacggaag gcatcaacag
     1021 agaggacaag atgaagaaat ccctatttct cggctcggtt gccgcggtca cgctgagtgc
     1081 cggggtcggc atggccgaca cgctggccga tgtgaaggcg cgcggcgaac tgatctgcgg
     1141 cgtcaatacc ggtctcgtgg gcttcgcggc gccggatgcg aacggcaact gggccggctt
     1201 cgacatcgcg gtgtgcaagg ccgtcgcggc ctcggtgctt ggcgatccct cgaaggtcaa
     1261 gtatgtgccg acgaccgggc agacccgctt taccgcgctg tcatcgggcg aggtcgatct
     1321 gctggcccgc aactcgac
//
LOCUS       DTVW01001254            1590 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_450541, whole
            genome shotgun sequence.
ACCESSION   DTVW01001254 DTVW01000000
VERSION     DTVW01001254.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1590)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1590)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1590
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_450541"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            29..457
                     /locus_tag="EYO87_16710"
     CDS             29..457
                     /locus_tag="EYO87_16710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67598.1"
                     /translation="MRADLMTWVQRLVGLVFVIGLIALSGAVFVQIRQSEGIPPLSVF
                     MGLVGLSVLILLAGACLSLISLAGSARRGADALQKLAWQGGGISPAAVASATTTSAAS
                     RPFTTAPMADIATQPEPQPQGPVAPSRPLRPSGRRLVAER"
     gene            complement(662..856)
                     /locus_tag="EYO87_16715"
     CDS             complement(662..856)
                     /locus_tag="EYO87_16715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011751165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1127 domain-containing protein"
                     /protein_id="HIC67599.1"
                     /translation="MSAIETNRSLAVGGVGNVVARIAALVSGWNDTRMTRRELSRLSD
                     RELDDIGLCRGDIERIARGF"
     gene            complement(1034..>1590)
                     /locus_tag="EYO87_16720"
     CDS             complement(1034..>1590)
                     /locus_tag="EYO87_16720"
                     /EC_number="2.1.1.193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009813211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="16S rRNA (uracil(1498)-N(3))-methyltransferase"
                     /protein_id="HIC67600.1"
                     /translation="DVGQQTAPQRDPPDLWLLFAPIKKARTDFIVEKAAELGVARILP
                     VQTDFTNSERIRQDRLQAHAIEAAEQCGGTFVPPVADLQPLARLLDGWDGARRILWAD
                     EAMAGPAETLAGLPQGSWAILIGPEGGFSEAERSRLAASPFVDRISLGPRILRADTAA
                     VAAIALWQAALGDWRADRQKKNPA"
BASE COUNT          261 a          505 c          539 g          285 t
ORIGIN      
        1 cggaagcaaa gcaagaaggg ggcaggcgat gcgggcggat ctgatgacat gggtgcagcg
       61 gctggtcggt ctggtcttcg tgatcggcct gattgcgctg tcgggggcgg tcttcgtgca
      121 gatccgtcag tccgaaggca ttccgccgct gtcggtcttc atgggtctgg tcggtctgtc
      181 ggtgctgatt ctgctggcgg gggcgtgtct gtcgctgatc tcgctggccg gatcggcccg
      241 gcgcggtgcc gatgcattgc agaaactggc ctggcagggc ggcgggatca gccctgccgc
      301 cgtggcctct gccaccacca ccagcgccgc atcgcggccg ttcaccaccg ctccgatggc
      361 cgacatcgcg acccagccag agccgcagcc gcagggcccc gtcgccccgt cgcggcctct
      421 gcgcccgtcc ggccgcagat tggtggccga gcgctagaac aggatgatcc tgttcgtgaa
      481 tcggctgcgt tgcgctgcat gtattccggg ctggcgaaga aacggagtcg gaacagggtt
      541 gcgtcgggaa tccgccgaag gattcggttg agcgtcgcct cgatccaggt ggtgacgcgg
      601 gcaaagaaaa aacccccgcg cgattgcatg ggggttcgtt cgtcttgtct gcgttgaagc
      661 cttagaagcc gcgcgcaatc cgctcgatgt cgccgcggca cagaccgata tcgtccagct
      721 cgcgatccga caggcggctc agctcgcgcc gggtcatgcg ggtgtcgttc caccccgaga
      781 ccagcgcggc gatgcgtgcg acgacgttgc caacacctcc gacagcaagg ctgcggttcg
      841 tttctatggc cgacatcata tcacctgcat ttccagtttg ccctttcaca gggcagtgtt
      901 tcggatgccg ggtagatagg tcgcgcaaag gcggaattcc agccatgcga cccgcaaggc
      961 cgctatgcaa gaaacgcagg gattaaagcg gcttgggcgg tcccgatggt cgcaaaacgg
     1021 tcacggaatg tcgctatgcc gggttctttt tctgcctgtc tgcgcgccag tcccccaggg
     1081 cggcctgcca cagcgcgatt gccgcaacgg cagcggtatc cgcgcgcagg atccgggggc
     1141 ccaggctgat tcggtcgaca aagggcgatg ccgccagacg cgatcgctcg gcttcggaaa
     1201 acccgccctc gggaccgatc aggatggccc acgacccctg cggcagaccg gccagcgtct
     1261 cggccgggcc cgccattgcc tcgtccgccc acaggatacg gcgcgcgcca tcccatccgt
     1321 ccagaagccg cgcaaggggc tgaagatccg cgaccggcgg cacgaaggta cccccgcatt
     1381 gttcggccgc ttcgatggcg tgggcttgca gacggtcctg ccggatgcgt tcggaattgg
     1441 tgaagtcggt ctgcacgggc aggatgcggg caacgcccag ttcggcggcc ttttcgacga
     1501 tgaaatcggt gcgtgccttc ttgatcggcg caaacaacag ccacagatcg ggcggatcgc
     1561 gctgcggggc ggtctgttgg ccgacatcca
//
LOCUS       DTVW01001255            1271 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_454132, whole
            genome shotgun sequence.
ACCESSION   DTVW01001255 DTVW01000000
VERSION     DTVW01001255.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1271)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1271)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1271
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_454132"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..461
                     /locus_tag="EYO87_16725"
     CDS             <1..461
                     /locus_tag="EYO87_16725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007791781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit B"
                     /protein_id="HIC67601.1"
                     /translation="DLRYDKIIIMTDADVDGAHIASLLMTFFFTQMRPLIDKGHLYLA
                     CPPLYRLTQGAHRIYVADDAEKERMLAKGLGGKGKIDVQRFKGLGEMDAKDLKDTTMN
                     PKTRKLIRVSIDDDEGGETGDLVERLMGKKPELRFEYIQENARFVEELDV"
     gene            complement(487..1251)
                     /gene="pgeF"
                     /locus_tag="EYO87_16730"
     CDS             complement(487..1251)
                     /gene="pgeF"
                     /locus_tag="EYO87_16730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan editing factor PgeF"
                     /protein_id="HIC67602.1"
                     /translation="MQTTLEILNHPLLSDVRHGFFTRKGGASSGLFAGLNCGRRSSDQ
                     ADMVRVNRGRVAQAMGVPAASLATVKQVHSADVVTLAAGEDVEAIRDQRADGIVTARR
                     DVALAVLTADCQPILLADPQAGVIGACHAGWRGALSGVIEATVAAMRALGATQIRAVI
                     GPSISQRAYEVGQDFMEDFLLEDPDYHRFFAGGPNGKPMFDLPSFGLSRLRGAGVEAE
                     WSGHCTYSDPARFFSYRRATHEGQADYGRLISAIAL"
BASE COUNT          253 a          418 c          405 g          195 t
ORIGIN      
        1 acgatctgcg ctacgacaag atcatcatca tgaccgatgc ggatgtggac ggggcgcata
       61 tcgcatcgct gctgatgacc ttcttcttca cccagatgcg gccgctgatc gacaaggggc
      121 atctctatct ggcctgtccg ccgctgtatc ggctgacgca gggcgcgcat cgcatctatg
      181 tcgccgatga cgccgagaaa gagcggatgc tggccaaggg gctggggggc aagggcaaga
      241 tcgacgtgca gcggttcaag ggcctgggcg agatggacgc caaggatttg aaggacacga
      301 cgatgaaccc gaagacgcgc aagctgatcc gggtcagcat cgacgatgac gagggcggcg
      361 aaaccggcga tctggtcgag cggctgatgg gcaagaagcc cgagcttcgc tttgaataca
      421 ttcaggaaaa cgcccgtttc gtggaagagc tggacgtctg agccggcggc gcggacggga
      481 ttcgggctac agcgcgatgg ccgagatcag ccggccgtaa tcggcctgcc cttcatgcgt
      541 ggcgcggcga tagctgaaga agcgcgcggg gtcggaatag gtgcaatggc ccgaccattc
      601 ggcctcgacc ccggcaccgc gcagacgcga gaggccgaag gacggcaaat cgaacatcgg
      661 cttgccgttc ggaccgcctg cgaaaaatcg atggtaatcg ggatcttcca gcaggaaatc
      721 ctccatgaaa tcctgcccga cctcataggc ccgctggctg atcgaggggc cgatcacggc
      781 ccggatctgc gtcgcgccca gggcccgcat cgcggccacc gtcgcctcga tcactccgga
      841 cagggccccg cgccagccgg catgacaggc gccgatcacg cccgcctgcg gatcggccag
      901 cagaatcggc tggcaatcgg ccgtcagcac cgccagcgcc acgtcgcgcc gcgccgtcac
      961 gatcccgtcg gctctctggt cgcggatcgc ctcgacatcc tcgcccgcgg ccagcgtcac
     1021 cacatcggcc gaatgaacct gtttcacggt cgccaggctg gcggccggaa cccccatcgc
     1081 ctgcgccacg cgcccgcgat tgacccgcac catatcggcc tggtcgctgg aacgtcggcc
     1141 acaattcagc cccgcaaaaa gccccgacga cgcaccgccc ttccgggtga aaaatccgtg
     1201 cctcacatcc gaaagcagcg ggtggttcag gatctcaagc gttgtctgca tgaagcctca
     1261 gcgcgtcgaa t
//
LOCUS       DTVW01001256            1003 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_456571, whole
            genome shotgun sequence.
ACCESSION   DTVW01001256 DTVW01000000
VERSION     DTVW01001256.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1003)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1003)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1003
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_456571"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1003)
                     /locus_tag="EYO87_16735"
     CDS             complement(<1..>1003)
                     /locus_tag="EYO87_16735"
                     /inference="COORDINATES: protein motif:HMM:PF08028.9"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67603.1"
                     /translation="HAAFVDAGLYRMFQPERFGGGEMDLALMVDVAMEIGRGCGSSAW
                     NLTNIAVQGWIGGMHYPETQEELWADNPAALIASSFPGPGSSVRRVDGGLLVDGTFNF
                     ASGVLVADWNNLQIFLPREDGPPEHYFALVPKSDYEIVDDWFVTGLAGTASQSIKMNE
                     VFIPEHRALFTSKIRGGGSPGSAVNPSVLYKLPVFSVGLKHFSGTAVGIAKGAIELIE
                     EDMKSRVTVTGIKLVDQQSVHLRIAESAAEVDAAWARLTRDCDDATRIYAAGDEPSMD
                     QRLGWRRNDAFAGQLSVSAVERLYSLTGGRGLSCKSPFQRAWRDVHAAVQQMLMSWDM
                     "
BASE COUNT          187 a          325 c          308 g          183 t
ORIGIN      
        1 catgtcccat gacatcaaca tttgctgaac ggcggcgtga acgtcgcgcc aggcgcgctg
       61 aaacgggctt ttgcacgata aaccgcggcc gccggtcagg ctgtacaatc gttcgaccgc
      121 gctgaccgac agttgccccg cgaaggcgtc gttgcggcgc catcccaggc gctgatccat
      181 gctcggctca tcgccggctg cgtaaatccg cgtcgcatcg tcgcagtccc gggtcagccg
      241 cgcccaggcg gcatccacct cggccgccga ttcggcgatg cgcagatgca ccgattgctg
      301 gtccaccaat ttgatgccgg tcaccgtcac ccgggatttc atgtcctctt cgatcagctc
      361 gatggcgccc ttggcgatgc cgacggcggt tccggaaaaa tgcttgaggc cgacgctgaa
      421 caccggcagc ttgtagagca ccgacggatt gacggcgctg cccgggctgc cgccgccgcg
      481 gattttcgac gtaaacagcg cccggtgctc gggaatgaaa acctcgttca ttttgatcga
      541 ctggctggcg gttccggcga ggccggtgac gaaccagtca tcgacgattt cgtagtcgga
      601 tttgggcacc agggcgaaat aatgttctgg cggcccgtct tcccggggca ggaatatttg
      661 cagattgttc cagtccgcaa ccaggacgcc gctggcgaaa ttaaaagtgc cgtcgaccaa
      721 cagcccgcca tcgacgcggc gaacgctgga tccgggaccg ggaaaggacg acgcgatcag
      781 cgccgccgga ttgtcggccc acaattcttc ctgggtttcc ggataatgca tgccgccgat
      841 ccagccttga accgcgatat tggtgaggtt ccaggcgctc gagccgcagc cgcgcccgat
      901 ctccatggct acgtccacca tcaacgccaa atccatctcg ccgccgccga agcgttcggg
      961 ctggaacatg cggtagaggc cggcatcgac gaacgcggcg tgg
//
LOCUS       DTVW01001257            1479 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_463577, whole
            genome shotgun sequence.
ACCESSION   DTVW01001257 DTVW01000000
VERSION     DTVW01001257.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1479)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1479)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1479
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_463577"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..433
                     /locus_tag="EYO87_16740"
     CDS             <1..433
                     /locus_tag="EYO87_16740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011749937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TRAM domain-containing protein"
                     /protein_id="HIC67604.1"
                     /translation="RPDIILTSDFIVGFPGETEQDHADTLRLIEQVGFGTAFSFKYSP
                     RPGTPACERPEIDAAVADARLQELQALLARQQKVAQQAMVGRRLGVLFEKPGRLPGQM
                     VGKSDYLHSVFVDAPNAAIGDLVQVDIVESAPNSLRGVLAA"
     gene            537..1376
                     /locus_tag="EYO87_16745"
     CDS             537..1376
                     /locus_tag="EYO87_16745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HIC67605.1"
                     /translation="MGYKTILTVLSRPTQISLLDDAETLATREDAHLDILCLGVDLSQ
                     AGYYFPGGTPYAFQEALDAAMEDAEALEQKVRDHLASASDLRWSVDTAVVQMGGVTSL
                     VGVKARFSDLTVLSRPYAEDAPGEAETVIEAALFEGGCPVLVLPKPGVPAQPPRRILV
                     AWNQSTEALAAVRRALPMLQAADNVEITIVNPRGGGPEGTDPGSALTRMLTRHGVHAE
                     IAVLARTGSAISEELDRRAAEIGAEMIVMGAYGHSRIRQFLVGSTTTSMLRTTISPLL
                     LLR"
     gene            1376..>1479
                     /locus_tag="EYO87_16750"
     CDS             1376..>1479
                     /locus_tag="EYO87_16750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003090764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraR/DksA family transcriptional regulator"
                     /protein_id="HIC67606.1"
                     /translation="MAMDDALDLAHFKTLLEQRAAELDRLLEDAESRS"
BASE COUNT          258 a          494 c          464 g          263 t
ORIGIN      
        1 gcggcccgac atcatcctga ccagcgattt catcgtgggc tttcccggcg agaccgaaca
       61 agaccacgcc gacacgctgc gcctgatcga gcaggtcggc ttcggcaccg ctttcagctt
      121 caaatattca ccgcgtcccg gcaccccggc ctgtgaacgg cccgaaatcg acgcggcggt
      181 cgccgatgcc cgcttgcagg aattgcaggc actgctggcc cgtcaacaga aggtggcgca
      241 gcaggccatg gtcggtcgca ggcttggcgt cctgttcgaa aaaccgggcc gcctgccggg
      301 ccagatggtt ggcaagtcgg attatctgca ttcggttttc gtggacgcgc ccaatgccgc
      361 catcggtgat ctggttcagg tcgatatcgt cgaatccgca ccgaattccc tgcgcggcgt
      421 tctggccgca tagctcgcca gcattgcccg tctttccacg gcgggatttg acgccgatca
      481 aggcaaggcg caggctgtcc tgataccatc cgaatccaac ccggaaggag atgatgatgg
      541 gctacaagac gatcctcacc gtgctgtcca gaccgacgca gatcagcctg ctggacgatg
      601 ccgaaacact cgccacgcgc gaggacgcgc atctcgacat cctttgcctc ggcgtcgatc
      661 tcagccaggc gggatattac tttcccggcg gcacgcccta tgcttttcag gaagcgcttg
      721 acgccgcgat ggaagatgcc gaggcactgg aacaaaaggt ccgcgaccat cttgcatcgg
      781 ccagcgatct gcgctggtcg gtcgatacgg cggtggtgca gatggggggc gtcaccagcc
      841 tggtcggcgt gaaggcgcgg ttttcggacc tgacggttct gtcgcgcccc tatgccgaag
      901 acgcgcccgg agaggccgag accgtgatcg aggccgcgct tttcgagggc ggctgcccgg
      961 ttcttgtcct gcccaagccc ggcgttccgg cccagcctcc gcgccgcatc ctggtcgcct
     1021 ggaaccagtc gaccgaggcg cttgcggccg tgcggcgcgc cctgccgatg ctgcaggcgg
     1081 ccgacaacgt cgagatcacc atcgtcaatc cgcgcggcgg cggccccgaa ggcaccgatc
     1141 ccggcagcgc gctgacgcgg atgctgacgc ggcatggtgt ccacgccgaa atcgccgtcc
     1201 tcgcccggac cggctcggcg atcagcgagg aactggatcg ccgcgcggcc gaaatcggcg
     1261 ccgaaatgat cgtgatgggg gcctatggcc attcccgtat ccggcagttc ctggtcggta
     1321 gcaccacgac cagcatgctc cgcaccacca tcagtccgct gttactgctg cgctaatggc
     1381 catggacgac gccctcgatc ttgcccattt caagaccctg ctggaacagc gggctgccga
     1441 gctggatcga ttgctggaag acgctgagtc tcgctcgca
//
LOCUS       DTVW01001258            2050 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_466482, whole
            genome shotgun sequence.
ACCESSION   DTVW01001258 DTVW01000000
VERSION     DTVW01001258.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2050)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2050)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2050
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_466482"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..440
                     /locus_tag="EYO87_16755"
     CDS             <1..440
                     /locus_tag="EYO87_16755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67607.1"
                     /translation="NRGRMTERYPANPNGSPRGITGLTTRDEGVEMADWLRERYPEEM
                     TIVIQHWFDNLTVDDQGFTITLNFGNSPEPMRVPFDALRTFVDPSVEFGLRFETQDGD
                     EDEDEDEEAGAEFDLDVADSSDDGPDDVPPGGGEVVQLDRWRK"
     gene            complement(496..1629)
                     /locus_tag="EYO87_16760"
     CDS             complement(496..1629)
                     /locus_tag="EYO87_16760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010395579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hint domain-containing protein"
                     /protein_id="HIC67608.1"
                     /translation="MPTQTWLYFGKRSLLDPTSKNNITQTQANAAVGWNAEDSSQFAL
                     TDTRGSPVSSSGGYRTTYQTSPGTAAEFSYRNPLTEASVSGQKVQSFVQATFQIKVPD
                     YAGGQVLTRSGVVIQMQNGDVFLRPRTDALESWDNIPAIQKITVASATPFASDTNIAT
                     TGFGAAFANVPVACFARGTMIQTATGPVSVENLGIGDRVLTAEGDLKPIIWIGSTVKC
                     ADALAAAPHLRPIRIAAGALGAGKPHADLVVSPQHRVLVRSRIAQRMFGTDEVLVAAK
                     QLLEVDGIDLAGDMAEMEYFHFLLDCHSIVVSNGAETETMFTGPEALKSVGRQARREI
                     LDLFPELADADYRPVPARELAPGRKARQLASRHARNGSALIEQ"
     gene            1856..>2050
                     /locus_tag="EYO87_16765"
     CDS             1856..>2050
                     /locus_tag="EYO87_16765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fumarate hydratase"
                     /protein_id="HIC67609.1"
                     /translation="MTTTRTETDSFGPLEVDASKYWGAQTQRSIRNFPIGWERQPVAI
                     IRALGAIKLAAARVNMRSGDL"
BASE COUNT          392 a          650 c          651 g          357 t
ORIGIN      
        1 acaaccgtgg ccgcatgacc gagcgctacc cggccaaccc gaacggctcg ccgcgcggca
       61 tcaccggcct gaccacccgc gacgaaggcg tcgagatggc cgattggctg cgggaacggt
      121 atcccgaaga aatgaccatc gtcatccagc actggttcga caatctgacc gtcgatgacc
      181 aggggttcac catcacgctc aatttcggca attcgcccga accgatgcgc gtccccttcg
      241 acgccctgcg caccttcgtc gatccctcgg tcgaattcgg cctgcgattc gaaacgcagg
      301 acggcgacga ggacgaagat gaggatgaag aagccggcgc cgaattcgat ctggacgtcg
      361 cagacagcag cgacgatggc ccggatgatg ttccgccggg cggcggcgag gtcgtgcaac
      421 tggaccgctg gcgcaaatag accgcttgcg ccgcgcgcag cggcaaggcg ggcccaggcc
      481 cgccccgacc atgctttact gttcgatcag ggctgatccg ttgcgggcgt ggcgcgatgc
      541 aagctggcgg gccttgcgac ccggcgccag ttcacgcgcc gggaccgggc gataatccgc
      601 atccgcaagt tcggggaaca ggtccagaat ttcgcgccgt gcctggcgtc ccaccgattt
      661 cagcgcctcg gggcccgtga acatcgtttc ggtttcggca ccgttcgaga cgacgatcga
      721 atggcaatcc agcagaaagt ggaaatactc catctcggcc atgtcgccgg cgaggtcgat
      781 gccgtcaact tccagcaatt gcttggcggc gaccagaacc tcgtcggtgc cgaacatgcg
      841 ctgcgcgatc cgggaccgga ccagaacccg atgctggggc gacacgacca gatcggcatg
      901 gggcttgccc gcgcccaggg cgcccgcggc aatcctgatc ggacgcagat gcggtgccgc
      961 ggccagcgca tcggcgcatt tgacggtgct gccgatccag atgatcggct tcaaatcacc
     1021 ctcggccgtc agaacgcgat cgccgatgcc cagattctcg acgctgaccg gcccggtcgc
     1081 ggtctggatc atggtcccac gcgcgaagca cgcgaccggc acattggcga aagccgcgcc
     1141 gaacccggtt gtcgcgatgt tggtgtcaga agcaaaaggc gtggcggaag cgaccgtgat
     1201 tttctggatc gccgggatat tgtcccagct ttcaagcgcg tcggttcgcg ggcgaaggaa
     1261 cacatcgccg ttctgcatct gaatgaccac gccgcttctg gtcagcacct ggccgccggc
     1321 ataatcaggc accttgatct ggaacgtggc ctggacaaag gactggactt tctggcccga
     1381 tacgctcgcc tcggtcagcg gattccgata cgaaaattcg gcggcggtcc cgggactggt
     1441 ctgataggtc gtgcgatatc cgccgcttga agacacgggg cttccccttg tgtcggtcag
     1501 agcgaactgc gaactgtcct cggcgttcca gcccacggcg gcgttcgcct gcgtctgggt
     1561 gatgttgttc ttcgacgtcg ggtccagaag cgaccgcttt ccgaaataca gccaggtttg
     1621 cgttggcatg atacgtttct ttcctgatag cctgcagcgt tggccgggcc gtcccggcgg
     1681 gggccgaggc agcgtcaacc ccggaaaata tgcgcctagc acaaccaaag gctgaaatca
     1741 ccctgtcaat cagtggaacg ccatgtcgct gtgtcgctgt tgcacgacag atgcgaattg
     1801 cctgtccagt ggctggccgc tacaaacccg cgcgacaaag gatgggagcg acaggatgac
     1861 cacgacccgc accgagaccg acagctttgg cccgctggag gtcgatgcct cgaaatactg
     1921 gggtgcgcag acccagcgtt cgatcagaaa ttttcccatc ggctgggaac gccagccggt
     1981 cgcgatcatc cgcgcgcttg gcgcgatcaa gctggcggcg gcgcgggtga acatgcgaag
     2041 cggcgatctg
//
LOCUS       DTVW01001259            3003 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_474575, whole
            genome shotgun sequence.
ACCESSION   DTVW01001259 DTVW01000000
VERSION     DTVW01001259.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3003)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3003)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3003
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_474575"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..677
                     /locus_tag="EYO87_16770"
     CDS             <1..677
                     /locus_tag="EYO87_16770"
                     /inference="COORDINATES: protein motif:HMM:PF01804.16"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="penicillin acylase family protein"
                     /protein_id="HIC67610.1"
                     /translation="LRLLSGWNSCLTAQSAPAALFELWWMTHLRPGILGRFAPDPDLR
                     RLLLPGDLDRLVVLIETPEPAWSTEDRDALLTRTLAAAWADCATRLGPDPAAWAWSRL
                     HQALMRHAASPLRGNAEWDVGPHGVGGSQSTVMNMAYRPEDFSVTSGASVRLVMDVGD
                     WDRSLCLNYPGQSGDPRSRHYADLAETWAASDHVPFLYSPDAISKATARLLRFKPATS
                     PGRSAV"
     gene            complement(700..1872)
                     /gene="argE"
                     /locus_tag="EYO87_16775"
     CDS             complement(700..1872)
                     /gene="argE"
                     /locus_tag="EYO87_16775"
                     /EC_number="3.5.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020186652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetylornithine deacetylase"
                     /protein_id="HIC67611.1"
                     /translation="MSTPSSRDILAQLVAFDTTSRVSNLPLIRYVGDFLSAYGVESRT
                     IPDETGQKANLWATIGPADRSGVILSGHTDTVPVDGQDWASDPFTLDARDGRLYGRGS
                     CDMKGFLACALAAVPGLVARDLARPVHLAFSYDEEVGCVGVVGLLEMLQSENIRPAMC
                     IVGEPTLMQVVTGHKAKRSMRVTVRGRGCHSSLAPQGVNAIDQAARLIVRMQDIAARL
                     AARGGIDRDYDITHSTAHTGIIRGGTALNIVPDICVFDCEFRVLPFEDADALVDELRD
                     YARELEAAMQRIAPEAGIEIDLYAQFPGLDTSPDAPVVTLAKSLTGSNGHSKVAFGTE
                     GGRFDQMLGVPTIICGPGSITQAHKPDEYVEQSQLDACDAFLAQLADWARIGRDWR"
     gene            complement(1887..2867)
                     /locus_tag="EYO87_16780"
     CDS             complement(1887..2867)
                     /locus_tag="EYO87_16780"
                     /inference="COORDINATES: protein motif:HMM:PF03466.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HIC67612.1"
                     /translation="MRFCNRSHMDPETAADADQRRAGITLRELEVLQSLVGGGTAINA
                     ARRLGISQSAVSRRLAQLEDRLGFQLFMRAGGRLVPTVEALSINEQLTPVFETLARIA
                     NHAAQPETAHAGTLSIVAPPTIAHRFLPSRIAAFKRHNPDLQITFDVLASDSLLTGIA
                     EGRFDVGMTDSNVAHEGITSELFLETQAICILPKQHHLASFEVIRPEDLRDEAFIALS
                     RRHSSRAAIDRLFDRAGLHLNRVMEASTNVSVTEFVREGLGVSLLNPFPLVHQMGENV
                     VMRPFLPAIAYSTNFLLPSSRAPSSVALAFMQAVRVSLDRAAYPKPPHST"
BASE COUNT          515 a          978 c          996 g          514 t
ORIGIN      
        1 cccttcgatt gctttcggga tggaattcct gtctgacggc ccagagcgcg ccggcggcgc
       61 tgttcgaatt gtggtggatg acccaccttc gccccggcat ccttggccgc ttcgcgcccg
      121 atccggatct gcggcggctt ctgctgccgg gcgaccttga ccgcctggtc gtgctgatcg
      181 agacgcccga gcctgcctgg agcacggaag atcgcgacgc gcttctgacc cgaacactcg
      241 ccgcggcctg ggccgattgt gcgacgcggc ttggacccga tcccgccgct tgggcctgga
      301 gccgtctgca tcaggcgctg atgcgtcacg ccgcaagccc attgcgcgga aatgccgaat
      361 gggatgtcgg accgcatggc gtgggcggct ctcagtccac cgtcatgaac atggcctatc
      421 ggccggagga cttttcggtc acctccggcg cctcggtccg gctggtgatg gatgtgggag
      481 actgggatcg cagcctgtgt ctgaactatc ccggccaatc cggcgacccg cgttcgcggc
      541 actacgccga cctggccgag acatgggcgg catcggacca tgtgcccttc ctctactcgc
      601 cggatgcgat cagcaaggcc acggcacggc tgctgcggtt caaaccggca accagcccgg
      661 gacgatctgc tgtctgatcc gtctttcggt agcggccggt caccgccaat cgcgtccgat
      721 acgggcccaa tctgcaagct gcgcgagaaa ggcgtcacag gcgtccagtt gcgattgttc
      781 cacatattca tccggcttgt gcgcctgcgt gatcgacccc ggtccgcaga tgatcgtcgg
      841 cacgcccagc atctggtcaa agcggccgcc ttcggttccg aaggcgacct tggaatgtcc
      901 gttgctgccc gtcaggcttt tggccagcgt caccacgggc gcgtcgggcg acgtgtccag
      961 ccccggaaac tgggcataga ggtcgatctc gatcccggct tcgggggcga tacgctgcat
     1021 cgcggcctcc agctcgcgcg cgtagtcgcg cagttcgtcg acaagcgcat cggcatcctc
     1081 gaagggcagc acgcggaatt cgcaatcgaa gacgcagatg tcgggcacga tgttcagcgc
     1141 ggtgccgccg cggatgatgc cggtatgggc ggtgctgtgg gtgatgtcgt agtcacggtc
     1201 gataccgccc cgcgcggcca gccgggcggc gatgtcctgc atccgcacga tcagccgcgc
     1261 ggcctggtcg atcgcgttca cgccctgcgg cgccagcgag gaatgacacc cccggccccg
     1321 caccgtcacc cgcatcgacc gcttggcctt gtggccggtg accacctgca tcagcgtcgg
     1381 ctctccgacg atgcacatgg cggggcggat gttttcggat tgcagcatct ccagcaggcc
     1441 cacgacgccg acgcagccga cctcctcgtc ataggaaaac gccagatgca cgggacgggc
     1501 cagatcccgc gcgaccaggc ccggcacggc ggccagcgcg caggccagaa agcctttcat
     1561 gtcgcaggat ccgcgcccgt acagcctgcc gtcccgcgca tccagcgtga acggatcgct
     1621 ggcccagtcc tgaccatcca ccggcaccgt gtccgtatgt cccgacagga tcacaccgga
     1681 ccggtcggcg ggtccgatgg tcgcccacag gttggccttc tgaccggtct cgtccgggat
     1741 cgtgcggctc tcgaccccat acgcggatag aaagtccccc acataccgga tcagcggcag
     1801 gttcgagacg cggctggtcg tgtcgaaggc gacaagctgc gccaggatat cgcggctgga
     1861 cggtgtggac atcaggattt cctttgtcag gtcgaatgcg gcggcttggg gtaggcggcg
     1921 cggtcaaggc tgacgcggac cgcctgcatg aaggccagcg ccaccgacga gggcgcacgg
     1981 ctggaaggca gcagaaagtt cgtgctgtag gcgatggccg gtagaaaggg gcgcatgacg
     2041 acattctcgc ccatctggtg gaccagcggg aacgggttca gcagcgacac gcccaggcct
     2101 tcgcgcacga attcggtcac ggacacgttg gtcgatgcct ccatcacgcg gttcaggtgc
     2161 aggcccgccc ggtcgaacag ccggtcgatg gcggcacggc tggaatggcg gcgcgacagg
     2221 gcgatgaatg cctcgtcgcg caggtcttcg gggcgaatca cctcgaagga ggcaaggtgg
     2281 tgttgcttgg gcaggatgca gatcgcctgc gtttccagaa acagctcgct ggtgatgcct
     2341 tcatgggcca cgttgctgtc ggtcatcccg acatcgaacc gaccctcggc gatgcccgtc
     2401 agcaggctgt cgctggccag cacgtcaaag gtgatctgca ggtcggggtt gtgccgcttg
     2461 aaggctgcga tccggctggg aaggaagcga tgcgcgatcg tcggcggggc gacgatggac
     2521 agcgtgcccg catgggccgt ttcgggctgt gccgcgtgat tggcgatgcg cgccagcgtc
     2581 tcgaagacgg gcgtcaactg ctcgttgatc gacaaggcct cgaccgtggg caccagccgg
     2641 ccgccggcgc gcatgaacag ctgaaacccc agacgatcct cgagctgcgc cagccggcgg
     2701 ctgaccgcgg attgcgagat gcccagcctg cgtgcggcgt tgatggccgt gccgccgccg
     2761 accagcgact gcaaaacctc gagttcgcgc agggttatgc cggcgcggcg ctggtcggca
     2821 tcggcggcgg tttcgggatc catgtgcgac ctattacaaa aacgcattga tattccagat
     2881 tgacatctgg ttatcgcata ataccctgtc cgccaagcag gattgcaaca ccggggatca
     2941 accccggacc gacaaccccg acagcaaacc ccaacaggaa ggacatgacg atgaaagcgc
     3001 tga
//
LOCUS       DTVW01001260            2457 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_477911, whole
            genome shotgun sequence.
ACCESSION   DTVW01001260 DTVW01000000
VERSION     DTVW01001260.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2457)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2457)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2457
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_477911"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..581)
                     /locus_tag="EYO87_16785"
     CDS             complement(<1..581)
                     /locus_tag="EYO87_16785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltetrahydrofolate cobalamin
                     methyltransferase"
                     /protein_id="HIC67613.1"
                     /translation="MTRTVLESATKTVIIGFDEPFCVIGERINPTGRKKLAAELEAGD
                     FSTVERDALEQVACGAMVLDVNSGAVFTNRMAEDPRYADNNFVEPVLMPELIARVQAL
                     VDVPLCIDSSVPGALKAGLETCNGRPLLNSVTGEEERLELVLPLVKQYNVPVVAISND
                     DTGISEDPEVRFAVARKIVERAADFGIPAHDIVV"
     gene            complement(594..1475)
                     /locus_tag="EYO87_16790"
     CDS             complement(594..1475)
                     /locus_tag="EYO87_16790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020043711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase"
                     /protein_id="HIC67614.1"
                     /translation="MALMQFRTPSRSAAPMAAFLQGASIEVMPRTAAGVSDLRDRLPA
                     GTLVFVAHIDGTAPADMQATVARLARDGFRPVPHVPARIVPSRAALNEWVAGYRDAGA
                     EGALLLGGGLSAPKGEFRDSMQLLETGLFGDFRHLFIAGHPEGNRDIDPDGGEAEVMR
                     ALRWKADFAARTDADMQIVTQFAFEAQPCIDWAGRLRAAGIDMPIRIGVAGPAKLQTM
                     LKFAIMCGVGPSLRVLQRRARDVTKLLLPYEPTDFVGALARARQDDPDFPIAAAHVFP
                     LGGIAASTDWLSRARGE"
     gene            complement(1505..1786)
                     /locus_tag="EYO87_16795"
     CDS             complement(1505..1786)
                     /locus_tag="EYO87_16795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015495335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67615.1"
                     /translation="MADVTLVLWRDIPAQVLQGKGRGAVRITLDERFEQAIDRAAMKA
                     GLSGTDDYLGEWRRETVQAEDAQALATRIETEYDTARLRDLIASGGRKD"
     gene            1986..>2457
                     /locus_tag="EYO87_16800"
     CDS             1986..>2457
                     /locus_tag="EYO87_16800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011750223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ppx/GppA family phosphatase"
                     /protein_id="HIC67616.1"
                     /translation="MTPRRPAGADAFPKNTVEPSGTRQPEEGALYAALDLGTNSCRML
                     IARPRGSQFQVIDSFSKPVQLGLGLEASGRLSRGSMARTVHALQVCRRKLDQHRVRNM
                     RLVATEACRRARNSRDFLRSIRRETGLPVEIIDAEEEARLAVISCAPLVSQKTET"
BASE COUNT          401 a          830 c          817 g          409 t
ORIGIN      
        1 acgacgatgt catgggccgg gatgccgaaa tcggcggcgc gctcgacgat ctttctggcc
       61 acggcgaagc gcacctcggg gtcttcgctg atgccggtat cgtcgttgct gatcgccacg
      121 acgggcacgt tgtattgctt gaccagcggc aggaccagtt ccagacgttc ctcttcgccg
      181 gtcacgctgt tcagcagcgg gcggccgttg caggtctcca accccgcctt cagcgcgccg
      241 ggaaccgagc tgtcgatgca caagggcaca tcgaccagcg cctgaacgcg cgcgatcagt
      301 tcgggcatca gcaccggttc cacgaaattg ttgtcggcat agcgcgggtc ttcggccatc
      361 ctgttggtga agaccgcgcc ggaattcaca tccagcacca tcgccccgca ggccacctgt
      421 tccagcgcgt ctcgttccac ggtcgagaaa tcgcccgcct ccagttccgc cgccagcttc
      481 ttgcggccgg tcgggttgat gcgttcgccg atcacgcaga acggctcgtc aaagccgatg
      541 atgacggtct tggtggcgga ttccagaacg gtgcgggtca tgggcgtgcc ttcctattcg
      601 ccgcgggcgc gcgacagcca gtcggtcgag gcggcgatgc cacccagcgg gaagacatgc
      661 gcggcagcga tgggaaagtc gggatcgtcc tgcctggcgc gggcaagagc gccgacgaaa
      721 tcggtcggct catagggaag cagcagcttg gtcacgtcgc gggcgcggcg ctgaagaacc
      781 cgcaggctgg ggccgacgcc gcacatgatg gcgaatttca gcatggtctg cagtttggcc
      841 gggccggcga cgccgatgcg gatgggcatg tcgatacccg ccgcgcgaag gcgtccggcc
      901 cagtcgatgc agggctgcgc ctcgaaggcg aactgggtca cgatctgcat gtcggcatcg
      961 gtgcgggcgg cgaaatcggc tttccagcgc aaagcgcgca tcacttcggc ctcgccgcca
     1021 tcggggtcga tgtcgcggtt gccctcgggg tggccggcga tgaacaaatg gcggaaatcg
     1081 ccgaaaaggc cggtctccag caattgcatc gaatcgcgga attctccctt cggcgcagac
     1141 agaccgccgc ccagcagcag cgcgccctcg gcgcccgcat cgcgatagcc ggcgacccat
     1201 tcgttcagcg ccgcgcggct gggaacgatt cgggccggga catgcggcac cggccgaaag
     1261 ccgtcgcgcg ccagacgggc gacggtggcc tgcatgtcgg cgggcgcggt gccatcgata
     1321 tgggccacga agaccagcgt tccggcgggc agacggtcgc gcagatcgga aacgcccgca
     1381 gcagtgcgtg gcatcacctc tatcgaggcg ccttgcagga aggccgccat cggggccgcg
     1441 ctgcgcgaag gggtccggaa ttgcatcagg gccatcttgt cctgcctcct gccaaaacgt
     1501 gtcgtcaatc cttgcgcccg cccgacgcga tcaggtcgcg cagacgggcg gtgtcgtatt
     1561 ccgtctcgat ccgtgtcgcc agcgcctgcg catcctcggc ctgaaccgtc tcgcgccgcc
     1621 attcgcccag ataatcgtcg gtgcccgaaa gccccgcctt cattgccgcc cggtcgatcg
     1681 cctgctcgaa ccgctcgtcc agcgtgatcc gaaccgcgcc ccggcccttg ccttgcagca
     1741 cctgcgcggg aatatcgcgc cacagaacca gcgtcacatc ggccatcgtc ggcgtcctcc
     1801 gtctcgcccc ctcatagcca cggatcgcgc cgccgcgccg cgcatttgcg accatggcgc
     1861 gggggatttg cgacctgtgt cgcaaactgg cgcccgaaac gccgctctcg cgtggcggcg
     1921 cacccttgat cgcaggcggg cggcaggcta cctttcggac aacttgtcat cggagggcgt
     1981 gtgtcatgac gcccaggcgt cctgcgggtg cggacgcgtt cccgaaaaat acggtcgagc
     2041 cgtcaggcac ccgacaaccc gaggaagggg cactgtatgc tgccctcgac ctcggcacaa
     2101 attcgtgccg gatgctgatt gcgcgaccgc gcggcagtca gtttcaggtc atcgacagct
     2161 tttccaagcc ggttcagctt ggtctggggc tggaggcttc ggggcggctg tcccgcggtt
     2221 cgatggcgcg caccgttcac gccctgcagg tatgccggcg caagctggat cagcatcggg
     2281 ttcgcaacat gcgcctggtc gcgaccgagg cctgccggcg cgcgcgcaac agccgcgatt
     2341 tcctgcgcag catccgccgc gagaccggcc tgccggtcga gatcatcgat gccgaggaag
     2401 aggcccggct ggcggtgatt tcctgcgcgc cgctggtcag ccagaagacc gagacgc
//
LOCUS       DTVW01001261            3207 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_482960, whole
            genome shotgun sequence.
ACCESSION   DTVW01001261 DTVW01000000
VERSION     DTVW01001261.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3207)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3207)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3207
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_482960"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..750)
                     /gene="pqqB"
                     /locus_tag="EYO87_16805"
     CDS             complement(<1..750)
                     /gene="pqqB"
                     /locus_tag="EYO87_16805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroloquinoline quinone biosynthesis protein
                     PqqB"
                     /protein_id="HIC67617.1"
                     /translation="MRIIVLGAAAGGGLPQWNCGCANCRAARAGRIPSLSQSSVAVSA
                     DGRDWAILNASPDIRTQMAATPALHPTGPRDMPMRAVLLTNGDIDHVAGLLTLRESQP
                     FDLFATEAIHDALAANPMLTALRADLVRRRKVTLDRPTDLLPGLTATLFAVPGKVPLY
                     QEGDIVETGLMGETTVGVELAANGKRGLYIPGCAAMPEWLKDRIAGADALLFDGTLWQ
                     DDEMIRMGLGRKTGHRMGHMAAGDSIAALADV"
     gene            complement(822..914)
                     /gene="pqqA"
                     /locus_tag="EYO87_16810"
     CDS             complement(822..914)
                     /gene="pqqA"
                     /locus_tag="EYO87_16810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroloquinoline quinone precursor peptide PqqA"
                     /protein_id="HIC67618.1"
                     /translation="MAWTKPILKEIACGMEINMYAPAEDEPVLF"
     gene            1053..2111
                     /locus_tag="EYO87_16815"
     CDS             1053..2111
                     /locus_tag="EYO87_16815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinoprotein relay system zinc metallohydrolase
                     2"
                     /protein_id="HIC67619.1"
                     /translation="MFYLILTACLAGPSGSCGPILLPQGDAATRQECTAQARRISEAW
                     LSGRKGLRSGGTACVATADLPALPLRQIAPGILLFQGDPVQLEDSPDGRIANLAAVVG
                     DASVAVIDSGVSRAQGQQLYAAIRRVTDRPISHLIVTHMHPDHAMGSAVFAEAGAEIV
                     GHRALPRALEARAPTYLDNMARLFGPQAMIGTEVLAPDVVVGNRLTIDLGGRVLQLNA
                     AQTAHTDNDLWIRDQATGTLFTGDLVFRDLTPIVDGSVLGWLDWLARPPRPAPPLIVP
                     GHGAISDEWTAAAGPQIRFLKALVDQTRQRIGEGQPMSQAVPQIGKALAPMADGWNSF
                     DMSVARDATAAYKELEWE"
     gene            2227..>3207
                     /locus_tag="EYO87_16820"
     CDS             2227..>3207
                     /locus_tag="EYO87_16820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011582172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter substrate-binding
                     protein"
                     /protein_id="HIC67620.1"
                     /translation="MAALSAGAAQAQKVIEPGSDDRIDWQSLEDFKASYGNLEGQSFT
                     ILGPWLGEDQTLFTSLLPYFEEATGAKANYSGSDSFEQQIVIDSDAGSPPDIAVFPQP
                     GLAADIARKGNLKPLGEETAQWVRDNYAAGDSWARLGTYAGADGTQQFYAFPFKADVK
                     SLVWYVPENFEDAGYEVPKTYEDLKALTEQIAADGETPWCIGLGSGGATGWPATDWVE
                     DLMLRMNPPEVYDGWVTNEIPFNDPKVVKAIEEFGWFAKNDDYVAGGAAAVASTDFRD
                     SPKGLFDSPPSCYMHKQASFVPSFFPEDVEVGLDADFFYFPAPGSRRNRHP"
BASE COUNT          555 a         1035 c         1073 g          544 t
ORIGIN      
        1 cacgtcggcc agcgccgcga tggaatcgcc agcggccata tggcccatgc ggtggccggt
       61 cttccggcca agtcccatgc ggatcatctc gtcgtcctgc cacaacgtgc cgtcgaacag
      121 cagcgcgtcc gcccccgcga tgcggtcctt cagccattcc ggcatcgccg cgcagccggg
      181 aatatagaga ccgcgcttgc cgttggcggc cagttcaacc cccaccgtcg tctcgcccat
      241 caggccggtc tcgacgatat cgccttcctg atacagcggc accttgccgg gaaccgcgaa
      301 gagggtcgcg gtcaggccgg gcagcaggtc cgtcggccgg tccagcgtca ccttgcgccg
      361 ccgcaccaga tcggcgcgca gggcggtcag catcgggttg gcggccagcg cgtcgtgaat
      421 ggcctcggtc gcgaacaggt cgaagggctg gctttcgcgc agcgtcagca ggcccgccac
      481 atggtcgatg tcgccgttgg tcagcaggac cgcgcgcatc ggcatgtcac gcggcccggt
      541 cggatgcagc gccggggtcg cggccatctg cgtgcggata tcgggcgagg cgttcaggat
      601 cgcccagtcg cggccatccg cgctgaccgc gaccgagctt tgactcagcg acgggatgcg
      661 tccggcgcgg gccgcgcggc aattcgcgca gccgcagttc cattgcggca gaccgccgcc
      721 cgccgccgca cccagaacga tgatcctcat gtctccaccg acgcaaagac cccgcccgag
      781 atcgtcggac ggggccgttc accttgcctg ttttccaagg ctcagaacag gacgggctcg
      841 tcctcggccg gggcatacat gttgatctcc atgccgcagg caatctcttt cagaatcggt
      901 ttggtccagg ccatgtgtca tcctccgttc acattcgccg ctgtggcgac tgtcattcat
      961 gttaaagcag tctgtgcgcc aaacaaccag accaaggtcg caattcgcgc ggatatgatc
     1021 gaaaccacca ccatcagcgg gaagattcgg caatgtttta cctgatcttg accgcctgcc
     1081 ttgccggtcc gtccgggagc tgcgggccga tcttgctgcc gcagggcgat gccgcgacgc
     1141 ggcaggaatg caccgcgcag gcgcggcgaa tcagcgaggc gtggctgtcc ggacgcaagg
     1201 ggctgcgatc cggcggcacg gcctgtgtcg cgacagcgga tctgcccgcc ctgccgctgc
     1261 ggcagatcgc gccgggcatc ctgctgtttc agggcgatcc ggtgcaactg gaggattcgc
     1321 ccgacggcag gatcgccaat ctggcggcgg tcgtcggcga tgcctcggtc gcggtcatcg
     1381 acagcggcgt gtcgcgcgcc cagggccagc agctttacgc cgccatccgg cgggtgaccg
     1441 accggccgat cagccatctg atcgtgacgc acatgcatcc cgatcacgca atgggcagcg
     1501 ccgtatttgc cgaggcgggg gccgagatcg tgggccatcg cgccttgccg cgcgcgctgg
     1561 aggcgcgggc gcccacctat ctggacaaca tggcgcgact gttcgggccg caggcgatga
     1621 tcggaaccga ggtgctggcg ccggatgtcg tcgtcggcaa tcgtctgacc atcgacctgg
     1681 gcggacgggt gctgcaactg aacgcggcgc agacggccca taccgacaac gatctgtgga
     1741 tccgggacca ggcgacgggc acgctgttca ccggtgatct ggtctttcgg gatctgacgc
     1801 cgatcgttga cggatcggtg ctgggctggc tggactggct ggcgcgcccg ccgcgacccg
     1861 cgccgccgct gatcgtgccg ggccatggcg cgatctcgga cgagtggacg gccgcggcag
     1921 gaccgcagat ccggttcctg aaggcgctgg tcgaccagac ccggcagcgg atcggcgaag
     1981 gccagccgat gtcgcaggcg gtgccccaga tcggcaaggc tcttgcgccg atggccgatg
     2041 ggtggaattc ctttgacatg tcggtcgccc gtgacgcgac cgccgcctac aaggagctgg
     2101 aatgggaata agtcccattt gacaggggac gcggctgcgc cgatgctggc gaaaaggatc
     2161 aacatcctgc gattcatcct aaaacgggag ggtaacttga ggaaagttct gtatctgacg
     2221 gccgcgatgg cggccctgtc ggcgggcgcc gcgcaggccc agaaggtgat cgaaccgggc
     2281 agcgacgacc gcatcgactg gcagagcctt gaggatttca aggccagcta cggcaatctg
     2341 gaagggcaat ccttcaccat tctcgggccg tggctgggcg aggatcagac gctgttcacc
     2401 tcgcttctgc cctatttcga agaggcgacc ggggccaagg cgaactattc cggttcggac
     2461 agtttcgaac agcagatcgt gatcgacagc gatgcaggct cgccgcccga tatcgcggtg
     2521 tttccccagc ccggtctggc cgccgacatc gcccggaaag ggaatctgaa gcccctgggc
     2581 gaagaaaccg cccaatgggt gcgcgacaat tatgcggccg gtgacagctg ggccaggctg
     2641 ggcacctatg ccggcgccga cggcacgcag caattctatg cctttccgtt caaggcggac
     2701 gtgaaatcgc tggtctggta tgtgcccgag aatttcgagg atgccggcta cgaagtgccc
     2761 aagacctacg aggatctgaa ggcgctgacc gaacagatcg ccgcggatgg cgaaaccccc
     2821 tggtgcatcg ggctgggctc gggcggggcg accggctggc ccgcgaccga ctgggtcgag
     2881 gatctgatgc tgcggatgaa tccgcccgag gtctatgacg gctgggtgac caacgagatc
     2941 ccgttcaacg atcccaaggt ggtcaaggcg atcgaggaat tcggctggtt cgccaagaac
     3001 gacgattatg tcgcgggcgg cgcggccgcc gtggcctcga ccgatttccg cgacagcccc
     3061 aagggtttgt tcgacagtcc gccctcgtgc tacatgcaca agcaggccag cttcgttccc
     3121 tcgttcttcc ccgaagatgt cgaggtcggg ctggatgccg atttcttcta cttcccggcg
     3181 ccgggaagta gaagaaatcg gcatcca
//
LOCUS       DTVW01001262            2222 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_494326, whole
            genome shotgun sequence.
ACCESSION   DTVW01001262 DTVW01000000
VERSION     DTVW01001262.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2222)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2222)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2222
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_494326"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..481)
                     /locus_tag="EYO87_16825"
     CDS             complement(<1..481)
                     /locus_tag="EYO87_16825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009827282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCO family protein"
                     /protein_id="HIC67621.1"
                     /translation="MAGVAALALAWLLLWSDFRTAPDQAREEPPFYADFELTGHDGVV
                     RTEDDFAGRWMLVFFGFTNCPDICPTTLSEVASVMDGLGDESAKVQPIFISVDPERDT
                     PGALAEYVPLFDAGIIGLTGTPEQIAATSETFPIFYERIEQASAPDGYTMNHTSHLFL
                     "
     gene            complement(694..1185)
                     /locus_tag="EYO87_16830"
     CDS             complement(694..1185)
                     /locus_tag="EYO87_16830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006969575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HIC67622.1"
                     /translation="MIVLFGGNFAPRGWAFCDGQLLAIASNSALFSILGTTYGGDGRT
                     SFSLPDLRGRVPMHAGSGPGLTPREIGQSLGRETVTLDTTQMPSHSHEVSVLNAPADN
                     DRPSGDLLARSAIYSATTSPTVALNPATIATSGGSQPHDNMPPTLCINYIIALEGIFP
                     SRS"
     gene            1418..>2222
                     /locus_tag="EYO87_16835"
     CDS             1418..>2222
                     /locus_tag="EYO87_16835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67623.1"
                     /translation="MTRFRSILAVLGLGLTAATVPPATSLALGPGFFDQVIAPAGLTC
                     SFNAYHDSAAQETQLNLFIPNGASQSSGGNYWSGGVITSWPGGDITAAAIASECGATN
                     VVVTLSDGANGTYATDDFVGVEFRATSLADGNTRDYVIGASGAGSTVLVNNSTMVANT
                     PPTADAGPDRTVGSGAAVTLDGSGSDANDAGQSLGYAWSQSSGPAVTLSGAATATPGF
                     TAPVLVAGAADAVLVFSLVVNDGSDPSPADTVAITVTAAANTPPTADAGP"
BASE COUNT          401 a          715 c          736 g          370 t
ORIGIN      
        1 agaggaaaag atgcgacgtg tggttcatcg tgtaaccatc cggggccgag gcttgctcga
       61 tccgctcgta gaagatcggg aaggtttccg aggtcgcggc gatctgttcc ggcgtgccgg
      121 taaggccgat gatgcccgca tcgaacaggg gaacatattc cgcgagggcc ccgggcgtgt
      181 cccgttcggg atccacagag atgaagatcg gctgcacctt ggcggattca tcgcccagtc
      241 cgtccatcac cgacgcgacc tccgacagcg tcgtgggaca gatatcgggg caattggtga
      301 agccgaagaa gaccagcatc cagcgcccgg cgaaatcgtc ctctgtccgg accacgccgt
      361 catgaccggt cagttcgaaa tcggcgtaga agggcggctc ttcccgggcc tggtcgggcg
      421 cggtccgaaa atccgaccag agcagcagcc aggccaaagc cagcgccgca acgcccgcca
      481 gcacccacaa aatccttcgc accgatgcca gggacatccg tctcacctgc cgctaatccg
      541 tttcgcgcaa gaaacatgtc ctcaccgcag gttcaagcac ggattgcctg ccgcgacagc
      601 atgtcacccg tccgtgaagc ctttgccgcc cggccggcgg ccagagcggc gccgaacgcg
      661 gggagggcgc gtcgataccc cgcagatgcg cccttagctt cgcgacggga agatgccttc
      721 aagagcgatg atgtaattga tgcacagggt cgggggcatg ttgtcatgcg gctggctgcc
      781 gccgctggtg gcgattgtgg ccgggttcag cgccaccgtc ggcgatgtcg ttgccgaata
      841 gatcgccgaa cgtgccagca gatcacccga gggccggtca ttgtcggcag gtgcgttcag
      901 cacgctgacc tcatggctgt ggctgggcat ctgcgtcgtg tccagcgtca ccgtctcgcg
      961 tcccagcgat tgcccgattt cccgcggcgt caggccgggg cccgagcctg catgcatcgg
     1021 cacccttccg cgaaggtcgg gcaggctgaa gctggtgcgg ccatcgccgc cataggtcgt
     1081 gccgagaatg ctgaagagcg ccgaattcga tgcgatcgcc agcaattgac catcgcagaa
     1141 cgcccatccg cgcggcgcga aatttccgcc gaacagaacg atcatgccaa tgaatggatc
     1201 catctcagtt ctcccgaagc ctgtcagtgt cgaagggtgt ccagtcatgg cccgacgggg
     1261 ccatgcggtc cggccaaggt ttattcactt caccggacgg cttctgtgtc ccggaacaca
     1321 gaatgcgaca aatggcgcca ttagcctgca gacagatttc gaaatgccgt ttccgggcgc
     1381 gtccgcgccg gggacgcaga atgaacggga cagagacatg acgcgcttca gatccattct
     1441 ggcggtattg ggactgggcc tgacggccgc gacggttccg ccggccacct ccctcgccct
     1501 gggtccggga tttttcgatc aggtcatcgc gcccgcgggc ctgacctgca gcttcaacgc
     1561 ctatcatgat tccgccgcgc aggagacaca gctgaacctg ttcatcccca acggggcaag
     1621 ccagtcttcc ggagggaatt actggtcagg cggcgtgatc accagctggc ccggcggcga
     1681 tatcaccgcg gccgcgatcg catcggaatg cggcgcgacg aatgtggtcg tgacattgtc
     1741 ggacggcgcc aacggcacct acgcgaccga tgatttcgtc ggagtcgagt tccgggccac
     1801 ctcgctcgcg gacggaaaca cccgtgacta cgtcatcggg gcctcggggg cgggatcgac
     1861 agttctggtc aacaattcca cgatggtcgc caacacgccg ccgacggccg atgcggggcc
     1921 ggaccggacg gtgggctcgg gcgcggcggt gacgcttgac ggcagcgggt cggacgccaa
     1981 cgatgccggc cagagcctcg gctatgcctg gagccagagt tcgggcccgg cggtcacgct
     2041 gagcggggct gcgacggcga cgccgggctt caccgcgccg gtgctggtgg ccggcgcggc
     2101 ggacgcggtg ctggtcttca gcctggtggt gaatgacggc tcggatccct cgccggccga
     2161 tacggtcgcg atcacggtga ccgccgccgc caacacgccg ccgacggccg atgcggggcc
     2221 gg
//
LOCUS       DTVW01001263            1260 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_500685, whole
            genome shotgun sequence.
ACCESSION   DTVW01001263 DTVW01000000
VERSION     DTVW01001263.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1260)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1260)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1260
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_500685"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..211
                     /locus_tag="EYO87_16840"
     CDS             <1..211
                     /locus_tag="EYO87_16840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005851216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67624.1"
                     /translation="IAHTVVDFAAALCFIIGSMMFFSASLQTPATWFFTIGSVFFAMK
                     PTLRLWREIKLYRMGETKTLADRLG"
     gene            complement(300..1001)
                     /locus_tag="EYO87_16845"
     CDS             complement(300..1001)
                     /locus_tag="EYO87_16845"
                     /inference="COORDINATES: protein motif:HMM:PF07729.10"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HIC67625.1"
                     /translation="MEHSKSATSTDRAYRQLRDAILSGSLPTDRKVTETGLASMLGLS
                     RTPVRAAIGRLLIEGLLQRRSGSGLWCVLPTPGEMQEIFDIRARLESYAAARAAERAS
                     PEQREAVKQSAERMSRHVAALAKRSDPDIARRIEEENAFFHRLILEAACAPRLERLLQ
                     STVDVAFVSLTLQRYSLGQRVRSAGHHHDIAEAIALGMAEWAARTMEAHILAAAASFR
                     NRYGVAAETPQDDKA"
     gene            1130..>1260
                     /locus_tag="EYO87_16850"
     CDS             1130..>1260
                     /locus_tag="EYO87_16850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012486979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HIC67626.1"
                     /translation="MSEPEGREFGPLQGLRVIEMGQLLAGPFVGTRCADFGAEVIKI"
BASE COUNT          223 a          379 c          404 g          254 t
ORIGIN      
        1 gatcgcccat accgtcgtcg atttcgcggc ggccctgtgc ttcatcatcg gatcgatgat
       61 gttcttttcc gccagccttc aaaccccggc gacctggttc ttcaccatcg gttcggtctt
      121 cttcgcgatg aagccgacat tgcggctgtg gcgtgaaatc aagctttacc ggatgggcga
      181 gacgaagact ctggcggacc ggttggggta ggttcgggac aagccttggc aggttgtccc
      241 aattgccctt ggcgccgcat gctgtcttgt ggaccgcatc gacaccgccg cgggcgggct
      301 caggccttgt catcttgcgg tgtctcggcc gcaacgccgt agcggttccg gaatgaggct
      361 gcggccgcca ggatatgcgc ctccatcgtg cgggcggccc attccgccat gccaagggcg
      421 atcgcctcgg caatgtcgtg gtgatggcct gccgagcgga cccgctgacc aaggctgtaa
      481 cgttgcaggg tcaggctgac gaaagccaca tccacggtgc tttgaagcag cctttcgagc
      541 cgcggggcgc aggcggcctc gaggatcagc cgatggaaaa acgcattctc ttcctcgatc
      601 cggcgagcga tatccggatc gctgcgcttc gccagggcgg cgacgtgacg tgacatgcgt
      661 tcggccgatt gcttcacggc ctcgcgctgt tccgggctgg cgcgttcggc ggcgcgcgcc
      721 gcggcatagg attccagccg cgcccggata tcgaagatct cctgcatctc gccgggcgtg
      781 ggcagcacgc accacaggcc gctgccgctg cggcgttgca gcaaaccctc gatcagcaag
      841 cggccgatcg ccgcgcggac gggcgttcgc gacaaaccca gcatggatgc aagcccggtc
      901 tcggtcacct tgcgatcggt cggcaggctg ccgctcagga tcgcgtcccg caactgacga
      961 taggctcggt cggtggaggt tgcggatttc gaatgttcca tcgggtcacg aatgcaaaaa
     1021 tttcagaaat tgtatccata ttcttaagtt tcttgcaagc aagacggaat ctggttcaga
     1081 atgtatccag agatgcgatc tttgggattc aagggggaca aaagccgcaa tgagcgaacc
     1141 cgaagggcga gagttcggcc ccctgcaggg tctgcgtgtg atcgagatgg gacaattgct
     1201 tgccggtccc ttcgtcggca cgcgctgcgc cgatttcgga gccgaggtca tcaagatcga
//
LOCUS       DTVW01001264            1040 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_504540, whole
            genome shotgun sequence.
ACCESSION   DTVW01001264 DTVW01000000
VERSION     DTVW01001264.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1040)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1040)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1040
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_504540"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..571
                     /locus_tag="EYO87_16855"
     CDS             <1..571
                     /locus_tag="EYO87_16855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009210397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HIC67627.1"
                     /translation="SEAGAFGALGALALAALVFRSLTWMRFWQIIASSARISGAILLI
                     MGSARIFGDYLNLIRLPDTVSQALTQTQLPTFAILMVVMIALLFLGMLIDAVSLIVVT
                     TPILLPLITALGYDPLWFGIILVMNLEMAVITPPVGLNLYTLKAVAPVLAIEDIIRSV
                     LPFVILQFLVLAMFVLVPEMALWLPGLMP"
     gene            611..>1040
                     /locus_tag="EYO87_16860"
     CDS             611..>1040
                     /locus_tag="EYO87_16860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009210398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C4-dicarboxylate ABC transporter
                     substrate-binding protein"
                     /protein_id="HIC67628.1"
                     /translation="MTTRRQILGATAALGGLSLAGLPRRAFAAETLTGVSYLPPSYAD
                     LAYGSQGLVDRVNKAGEGVVALDYYDSGRLVAADEQLPALRAGTIDFMFHTSSYVTRS
                     LPILGVLGLPGVVGPLYENPDRLRRGAPLFELIAAELEKQG"
BASE COUNT          156 a          321 c          347 g          216 t
ORIGIN      
        1 aagcgaggcg ggcgcctttg gcgccctggg cgcgctggcg ctggcggcgc tggtgtttcg
       61 cagcctgaca tggatgcgtt tctggcagat catcgcgtcg agcgcgcgga tctcgggggc
      121 gatcctgctg atcatgggca gcgcgcggat ctttggcgat tacctcaacc tgatccggct
      181 gcccgatacg gtatcgcagg ccctgaccca gacccagctt ccgactttcg ccatcctgat
      241 ggtggtgatg atcgccctgt tgttcctggg catgctgatc gacgcggttt cgctgatcgt
      301 ggtgacgacg ccgatcttgc tgccgctgat cacggccctg ggctatgatc cgctgtggtt
      361 cgggatcatc ctggtcatga atctcgagat ggcggtgatc acgccgcccg tggggctgaa
      421 cctctatacg ctgaaggccg tcgccccggt cctggccatc gaggatatca tccgcagcgt
      481 gctgcccttc gtgatcctgc aattcctggt gctggcgatg ttcgtgctgg tgcctgaaat
      541 ggcgctgtgg ctgccgggcc tgatgccctg agccccgcct gacgatagac aaaaagaggg
      601 aggagaagac atgaccacca gaagacagat ccttggcgcc accgccgctc ttggcgggct
      661 gtcccttgcg gggctgccgc ggcgggcctt tgccgccgag acgctgaccg gggtcagcta
      721 cctgccgcca tcctatgccg atctggcata tggttcgcag gggttggttg accgggtgaa
      781 caaggcggga gaaggcgtcg tcgcgctgga ttattatgac agcggccgcc tggtcgcggc
      841 ggatgaacaa ctgccggcgc tgcgggctgg cacgatcgac ttcatgtttc acacctcatc
      901 ctatgtcacg cggtcgctgc ccatccttgg ggtcctgggc ctgcccggcg tggtcggccc
      961 cctttatgag aaccccgacc ggttgcgccg cggcgcgccc ctgttcgaac tgatcgcggc
     1021 agagctggaa aaacaggggc
//
LOCUS       DTVW01001265            1815 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_510239, whole
            genome shotgun sequence.
ACCESSION   DTVW01001265 DTVW01000000
VERSION     DTVW01001265.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1815)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1815)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1815
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_510239"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            609..>1815
                     /locus_tag="EYO87_16865"
     CDS             609..>1815
                     /locus_tag="EYO87_16865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_354210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic murein transglycosylase"
                     /protein_id="HIC67629.1"
                     /translation="MSTALVGALASCAGPMNRAPGGGGSYAAPEPAPIPAASAGDEAG
                     LKNFVQSFRSRALSSGVSAATYDRAMRIARYNPDVIRLDRKQAEFSRPVWLYLDSAVS
                     DSRIDTGREKAARFNSTLSAIEARYGVPREIVLAVWGMESNFGANRGKMQIIPSLATL
                     AYDGRRGEMFQKQLIASLKILQAGDVDPENMLGSWAGAMGHTQFMPTSYLEYAVDFTG
                     DGRRDIWSDDPTDALASTAAYLARSGWRRGEAWGAEVRLPANFNMGQIGKSTRKSSGT
                     WAAQGVTRFGGGSLPSGNGSIIMPAGARGPAFLILDNFRSILRYNNSDNYALGVSFLG
                     ERIAGRSGIQGGWPRNDRPLSTAERKEIQQRLRAQGYYDGEIDGLFGSGTMTAVAAYQ
                     RARGVTPDGY"
BASE COUNT          312 a          618 c          585 g          300 t
ORIGIN      
        1 gcgcggacga gatgaacgcc ctgctgcgcg agatggagcg cgtccccaga tcgggacaat
       61 gcaatcacgg ccggccgacc tgggtcaagc tgcgccttgc cgatatcgaa cgtcttttcg
      121 gacgcaagga gtgaccctgc ccggcccgcg acaataaggg cgggccggag gaacccatgc
      181 ttcagatcag ccccgacaag gccgcccatg tcatcatccg cgcccgcgaa tatgacaggc
      241 ccgtctgacc gccggcacgc ttctggaaac cttttccgaa atgacatgcc gggcctgcgt
      301 ctgggatcac cgccccggcg tcagccggtt tcgggcgcca gacggcggtc atgaccgcga
      361 tttcgttgtc ctgcatcgct gccagatcat cgacccgacc tgcgtcgccg ccgtgggcca
      421 tccggcgccg atcccgtctt tccggtgcgc cgataacatc cgcgtcagac tgcctgcctg
      481 acgccggcaa acggatgccg ggtcgcctcc cgaccctatc caagccgaat cgcattcgct
      541 agactgctca caaacaagca cgaagcagta acaaacaggc gatcctcatg accatgttcc
      601 gaatcctgat gtccaccgcc cttgtcgggg cgctggcctc ttgcgcagga ccgatgaacc
      661 gcgcgcccgg cggcggcggt tcctatgccg cgcccgagcc ggcgccgatc cccgccgcgt
      721 cggccgggga cgaggccggg ttgaagaatt tcgttcagtc cttccgctcg cgcgcgctgt
      781 cttcgggcgt ttcggcggcg acttatgacc gcgccatgag gatcgcgcgc tacaacccgg
      841 acgtgatccg gctggaccgc aaacaggccg aattctcgcg ccccgtctgg ctgtatctgg
      901 acagtgccgt ctctgattcc cgcatcgata ccgggcgcga gaaggcggcg cggttcaaca
      961 gcaccctgtc ggcgatcgag gcgcgctatg gcgtgccgcg cgaaatcgtg ttggccgtct
     1021 gggggatgga atcgaatttc ggcgccaatc gcggcaagat gcagatcatc ccctcgctcg
     1081 cgacgctggc ctatgacggc cgccggggcg agatgttcca gaaacagctg atcgcctcgc
     1141 tgaagatcct gcaggcgggc gatgtcgatc ccgaaaacat gctgggcagc tgggccggcg
     1201 cgatgggcca tacccagttc atgccgacat cctatcttga atatgccgtc gatttcaccg
     1261 gtgacggccg ccgcgacatc tggtccgacg atccgaccga cgcgctggcc tcgaccgcgg
     1321 cctatctggc tcggagcggc tggcgccggg gcgaggcatg gggggccgag gtcaggctgc
     1381 ccgcgaattt caacatgggc cagatcggca agagcacccg caaatccagc ggcacatggg
     1441 ccgcgcaggg cgtgacccgc ttcggcggcg gcagcctgcc atcgggcaac ggctcgatca
     1501 tcatgccggc gggcgcgcgc ggaccggcct tcctgatcct cgacaatttc cggtcgatcc
     1561 tgcgctacaa caattccgac aattatgcgc ttggcgtgtc cttcctgggc gaacggatcg
     1621 ccgggcggtc gggcatccag ggcggctggc cacgcaacga ccggcccttg tccacggccg
     1681 agcggaagga aatccagcag cgcctgcgcg cccagggcta ttatgacggc gagatcgacg
     1741 ggctgttcgg ttcgggcacg atgacggcgg tggccgccta tcagcgcgcc aggggcgtga
     1801 cgccggacgg ctacc
//
LOCUS       DTVW01001266            1122 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_515963, whole
            genome shotgun sequence.
ACCESSION   DTVW01001266 DTVW01000000
VERSION     DTVW01001266.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1122)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1122)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1122
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_515963"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..301
                     /locus_tag="EYO87_16870"
     CDS             <1..301
                     /locus_tag="EYO87_16870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DNA topoisomerase IB"
                     /protein_id="HIC67630.1"
                     /translation="RTWTGTVLAALALAEYEAADSEAAARANVREAIETVAATLGNTP
                     AICRKCYVHPQIIDAYLSGGLKLELREKIADNLKKPDLRPEEKQVLTFLRRRLKS"
     gene            298..627
                     /locus_tag="EYO87_16875"
     CDS             298..627
                     /locus_tag="EYO87_16875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010397664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF779 domain-containing protein"
                     /protein_id="HIC67631.1"
                     /translation="MSTVTATPEALQLIEEITADHGPVLFHQSGGCCDGSSPMCYPQG
                     DFKVSERDVKIGEIGGAPFYISASQYETWKHTDLTIDVVPGRGGMFSLDNGREKRFLT
                     RSDLCAT"
     gene            698..>1122
                     /locus_tag="EYO87_16880"
     CDS             698..>1122
                     /locus_tag="EYO87_16880"
                     /EC_number="1.2.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007799689.1"
                     /note="catalyzes the reduction of N-acetyl-5-glutamyl
                     phosphate to N-acetyl-L-glutamate 5-semialdehyde in
                     arginine biosynthesis; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HIC67632.1"
                     /translation="MAHSIFIDGESGTTGLQIRDRLLGRDDIALIQIDPERRKDADAR
                     REAFAAADIAILCLPDDAAREAVDLTRDLDVRLIDASTAHRVDENWVYGFAELAQGVR
                     DQIAGARLLSNPGCYSTGAIAIIAPLIAAGLIDEEEAVAT"
BASE COUNT          210 a          374 c          365 g          173 t
ORIGIN      
        1 ccgcacctgg accggcaccg tgctggccgc gctggcgctg gcggaatacg aggccgccga
       61 cagcgaggcc gccgcccggg ccaatgtccg cgaggcgatc gagaccgtcg ccgcgaccct
      121 gggcaacacg cccgcgatct gccgcaaatg ctatgttcat ccgcagatca tcgacgccta
      181 tctgtcgggc gggttgaagc tggaactgcg cgagaagatc gcggacaatc tgaaaaagcc
      241 ggatctgcga cccgaggaaa agcaggtcct gacattcctc aggaggaggt tgaaatcatg
      301 agcaccgtca ccgcgacacc ggaagccctg caactgatcg aggaaatcac ggccgatcac
      361 gggccggtcc tgttccacca gtcgggcgga tgctgcgacg ggtccagccc gatgtgttac
      421 ccgcagggcg acttcaaggt cagcgaacgc gacgtgaaga tcggcgagat cggcggcgcg
      481 cccttctata tctcggccag ccagtacgag acctggaaac ataccgatct gaccatcgac
      541 gtggtgcccg gccggggcgg catgttcagc ctggataacg ggcgcgaaaa gcggttcctg
      601 acccgttcgg acctgtgcgc gacctgaccc gctgtcccgc gattgtgaag ccgcgaccga
      661 tcgcctataa gctgcgcgtc cccctggagg ttcgatcatg gcgcacagca tcttcatcga
      721 cggcgaatcc ggcacgacgg gtctgcagat ccgcgaccgc ctgctgggcc gcgacgatat
      781 cgcgctgatc cagatcgacc cggaacgccg caaggatgcc gatgcccggc gcgaggcctt
      841 tgccgccgcc gacatcgcca tcctctgcct gcccgatgat gccgcgcgcg aggcggtgga
      901 tctgacccgc gatctggacg tgcggctgat cgacgcctcg accgcgcatc gggtcgatga
      961 aaactgggtc tatggcttcg cggaactggc ccaaggtgtc cgcgaccaga tcgcgggcgc
     1021 gcggctgctc agcaatccgg gctgctattc gaccggcgcc atcgcgatca tcgcgccgct
     1081 gatcgcggcc ggcctgatcg acgaggaaga ggccgtcgcg ac
//
LOCUS       DTVW01001267            1544 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_518677, whole
            genome shotgun sequence.
ACCESSION   DTVW01001267 DTVW01000000
VERSION     DTVW01001267.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1544)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1544)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1544
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_518677"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..678)
                     /locus_tag="EYO87_16885"
     CDS             complement(<1..678)
                     /locus_tag="EYO87_16885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011747885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate-nucleotide--dimethylbenzimidazole
                     phosphoribosyltransferase"
                     /protein_id="HIC67633.1"
                     /translation="MTSFDETAAKAARDRQNSLTKPPGSLGRLEDLAVFMAGWQGRAR
                     PRLERAQALVFAGNHGVVAQNVNPFPAEVTALMVANFSAGGAAINQLCRVAGADLSVV
                     TLELDRPTADFTQNVAMTSDEVRAAMQAGADAVDSQADVLLLGEMGIGNSTVAAVLAA
                     WTFGGRAEDWVGPGTGAEGEILANKLRAVTAGLARHDPMTAADALAAFGGREQAALCG
                     AILRAREL"
     gene            complement(665..1195)
                     /gene="cobU"
                     /locus_tag="EYO87_16890"
     CDS             complement(665..1195)
                     /gene="cobU"
                     /locus_tag="EYO87_16890"
                     /EC_number="2.7.1.156"
                     /EC_number="2.7.7.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018001215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional adenosylcobinamide
                     kinase/adenosylcobinamide-phosphate guanylyltransferase"
                     /protein_id="HIC67634.1"
                     /translation="MSERGHITLVTGGARSGKSALAERLAARHGGSRIYIATAEVGDD
                     EMSHRIAEHQRRRGTGWITLEEPLDLTGALDRSDGQGVRLVDCLTLWLANCRGSADIG
                     ALCMTLRQQTCPVVLVTNELGQGIVPGNALARQFRDRHGWMNQAVAQIADQVWLSVSG
                     QPMRLKPPRENPDDIL"
     gene            1325..>1544
                     /locus_tag="EYO87_16895"
     CDS             1325..>1544
                     /locus_tag="EYO87_16895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011747651.1"
                     /note="is involved in the transport of the murein peptide
                     L-alanyl-gamma-D-glutamyl-meso-diaminopimelate; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide ABC transporter substrate-binding
                     protein OppA"
                     /protein_id="HIC67635.1"
                     /translation="MMKLFTTTALLAALAMPALAVQPAEGEKLAQNQTYTYWLLDAIK
                     SLDPAKNTDVEGSDVLRSLFEGLMNEDAK"
BASE COUNT          256 a          560 c          472 g          256 t
ORIGIN      
        1 cagttcacgc gcgcgcagga tggcgccgca aagcgccgcc tgttcgcgtc ctccgaacgc
       61 cgccaatgcg tcggccgccg tcatcggatc gtggcgggcc agccccgcgg tcacggcacg
      121 cagcttgttg gcgaggatct cgccctcggc gccggtgccg ggaccgaccc aatcctcggc
      181 ccggccgcca aaggtccacg cggccagcac cgcggcgacg gtggaattgc cgatgcccat
      241 ctcgcccagc agcaggacgt cggcctgcga atccaccgca tcggcccccg cctgcatcgc
      301 cgcgcgaacc tcgtccgacg tcatggccac gttctgggtg aaatcagcgg tcgggcggtc
      361 cagttccagg gtgacgacgg acagatcggc cccggccacg cgacacaact ggttgatcgc
      421 cgccccgccg gcgctgaaat tggccaccat cagcgccgtc acctcggccg gaaacgggtt
      481 cacgttctgc gcgaccaccc cgtgattgcc cgcaaagacc agcgcctgcg cgcgttcgag
      541 gcgaggcctg gcccgcccct gccagccggc catgaacacg gccagatcct caagccggcc
      601 cagcgagccc ggcggtttgg tcaggctgtt ctgcctgtcg cgcgccgcct tggcggcggt
      661 ttcgtcaaag gatgtcatcc ggattctccc gcgggggttt cagccgcatc ggctggccag
      721 acaccgacag ccagacctgg tcggcgatct gcgccaccgc ctgattcatc cagccatgcc
      781 ggtcccggaa ttgccgcgcc agcgcgttgc cgggcacgat tccctggccc agttcgttcg
      841 tgaccagcac gacaggacag gtttgctgac gcagcgtcat gcataatgcg ccgatatccg
      901 ccgagcccct gcaattggcc agccacaggg tcaggcaatc gaccagtcgc accccctgcc
      961 cgtcgctgcg atccagcgcg cccgtcagat ccagcggctc ttccagggtg atccatccgg
     1021 tcccgcgacg gcgttgatgt tccgcgattc tgtgggacat ttcatcgtca ccgacctcgg
     1081 ccgtggcgat atagatgcgg ctgccgccat gccgcgcggc cagccgttcg gccagcgccg
     1141 acttgcccga acgcgcgccc cccgtcacca gcgtgatatg tccccgttcg ctcatcgtcg
     1201 ctatctgttt cacagcatcg ggcgcaagga aaggcgcaga accggcttta cccgcctttg
     1261 gtttcgacta gtttctcgcc attcaggtgc agatcagaca ccgactcaac ttggaggcat
     1321 atccatgatg aaactcttca ccaccaccgc gctgctggcg gccctggcga tgccagccct
     1381 cgccgtccag cccgccgagg gcgagaagct ggcccagaac cagacctata cctactggct
     1441 gctggacgcg atcaagtcgc tggacccggc gaagaacacg gacgtcgagg gttcggacgt
     1501 gttgcggtcc ctgttcgagg gattgatgaa cgaggacgcg aagg
//
LOCUS       DTVW01001268            2012 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_523611, whole
            genome shotgun sequence.
ACCESSION   DTVW01001268 DTVW01000000
VERSION     DTVW01001268.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2012)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2012)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2012
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_523611"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..537)
                     /locus_tag="EYO87_16900"
     CDS             complement(<1..537)
                     /locus_tag="EYO87_16900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017927839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysE family translocator"
                     /protein_id="HIC67636.1"
                     /translation="MTLPLEALWLYAGALLAIWLTPGPVWVAIVARALSSGWGGVWPL
                     SLGVVIGDFLWPLIAIFGLSLIAGQYGEFLLVLRWIAVVVFIAMGLALLRHAKAPVET
                     DRRLTRRGKWAGFTAGLMAIAGNPKAALFYVGVLPGFFDVGRLTRTDIAVIVAMSGAI
                     PLAMNLVMGATIAAARARL"
     gene            complement(537..1607)
                     /gene="recF"
                     /locus_tag="EYO87_16905"
     CDS             complement(537..1607)
                     /gene="recF"
                     /locus_tag="EYO87_16905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA replication/repair protein RecF"
                     /protein_id="HIC67637.1"
                     /translation="MTLRRLSLAQFRSWARLDLELDRHPLAIHGPNGSGKTNILEAVS
                     MLSPGRGLRGAPAPDQARQGPMAGWRIRARIGDLPVETTAPPGQARSVAIDDKAAPQT
                     ALGRLLRIIWLVPAMDRLWSDPPEARRRFLDRVTLSLTPDHADLALTYDKAMRERNRL
                     LRDQIGDPGWYRALEAQMAQAGAGLTRNRLAALAAIMDAQQSGDFPAARLTLLPGEGQ
                     ADDPDRDSIADRLAAMRPRDLAAGRSLTGPHRADLGATWGPQDMPAALSSTGEQKALL
                     LSLILANARALSDQPVILLLDEVAAHLDADRRARLHDQIAALPAQSLLTGTGPELFDT
                     LDARARRLSITRVNGASAATEA"
     gene            complement(1604..>2012)
                     /locus_tag="EYO87_16910"
     CDS             complement(1604..>2012)
                     /locus_tag="EYO87_16910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019955567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HIC67638.1"
                     /translation="LTSKVIDGTFPDYSRVIPVGNARKLEVDAADFARAVDRVATVSS
                     ERSRAVKLALEADKLVLSVNAPDAGAADEELIVAYDDDPLEIGFNAKYLQEIASQVDR
                     DNAVFMFNGSGDAALIREGSDQSAVYVVMPMRV"
BASE COUNT          325 a          707 c          699 g          281 t
ORIGIN      
        1 aaggcgggcg cgggcggcgg cgatggtcgc ccccatgacc aggttcatgg caaggggaat
       61 ggcgccggac atggcgacga tcacggcgat gtcggtcctg gtcaggcggc ccacgtcgaa
      121 aaagccgggc aggaccccga catagaaaag cgcggccttg ggattgccgg caatcgccat
      181 cagcccggcg gtaaagcccg cccatttgcc gcgccgggtc aggcggcggt cggtttccac
      241 cggcgccttc gcgtggcgca gcagggcaag gcccatggca atgaagacga caaccgcgat
      301 ccagcgcagc accagcagaa attcgccata ttgcccggcg atcagcgaca ggccgaagat
      361 cgcgatcagc ggccagagga aatcgccgat gaccacgccc agcgacagcg gccagacccc
      421 gccccagccc gaggacaggg cgcgggccac gatcgccacc cagaccggcc ccggcgtcag
      481 ccagattgcc agcagcgcgc cggcgtaaag ccaaagagcc tccaatggca gggtcatcaa
      541 gcctccgtcg cggcggatgc gccgttcacc cgggtgatcg acaggcggcg ggcgcgcgcg
      601 tccagcgtgt cgaacagctc ggggccggtg ccggtcagca ggctttgcgc gggcagcgcc
      661 gcgatctggt catgaagccg cgcgcgccgg tcggcgtcca gatgcgccgc cacctcgtcc
      721 agcaacagga tcaccggctg atccgacagg gcgcgggcat tggccaggat cagcgacagc
      781 agcagcgcct tctgttcgcc ggtcgaggac agcgcggcgg gcatgtcctg cggcccccag
      841 gtcgcgccca gatcggcgcg gtgcgggccg gtcaggctgc gcccggccgc cagatcgcgc
      901 gggcgcatcg cggcaagccg gtcggcgatg ctgtcccgat cgggatcgtc ggcctgtcct
      961 tcgccgggca gcagggtcag ccgggcggcg gggaaatcgc cgctttgctg ggcgtccatg
     1021 atcgccgcca gcgccgccag ccggttgcgg gtcagccccg cacccgcctg cgccatctgt
     1081 gcctccagcg cccgatacca gcccggatcg ccgatctggt ccctcagcag ccggtttcgt
     1141 tcgcgcatcg ccttgtcata ggtcagcgcc agatcggcat gatcgggtgt caggctcagc
     1201 gtgacgcgat ccagaaagcg ccggcgcgcc tcgggcgggt cggaccacag ccggtccatc
     1261 gcgggcacca gccagatgat ccgcagcaga cgccccaggg ccgtctgcgg ggccgccttg
     1321 tcgtcgatgg cgacgctgcg cgcctggccg ggcggggcgg ttgtctcgac cggcaggtcg
     1381 ccgatccgcg cccggatccg ccagcccgcc atgggcccct gccgcgcctg atcgggggcg
     1441 ggggcgccgc gcaacccgcg cccgggcgac agcatcgaca ccgcttcgag gatgttcgtc
     1501 ttgcccgatc cgttcgggcc gtgaatcgcc aggggatgcc ggtccagttc cagatccagc
     1561 cgggcccagg accggaattg cgccagcgaa agccgcctca gcgtcacacg cgcatcggca
     1621 tgacgacata gaccgcgctt tgatcgctgc cctcgcggat cagcgccgca tcacccgagc
     1681 cgttgaacat gaagaccgca ttgtcacgat cgacctggct ggcgatttcc tgaagatatt
     1741 tggcgttgaa tccgatttcg agcgggtcgt cgtcataggc gacgatcagt tcctcgtcgg
     1801 cggcgccggc atcgggcgcg ttcaccgaca ggaccagctt gtcggcctcg agcgccagct
     1861 tgacagcgcg cgaacgttcg ctgctgacgg tcgccacccg gtccaccgcg cgggcgaaat
     1921 cggctgcgtc cacctccagc ttgcgggcgt tgccgaccgg gatcacgcgg ctgtaatcgg
     1981 ggaaggtgcc gtcgatgacc ttcgaggtca gg
//
LOCUS       DTVW01001269            1910 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_529336, whole
            genome shotgun sequence.
ACCESSION   DTVW01001269 DTVW01000000
VERSION     DTVW01001269.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1910)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1910)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1910
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_529336"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..363)
                     /locus_tag="EYO87_16915"
     CDS             complement(<1..363)
                     /locus_tag="EYO87_16915"
                     /inference="COORDINATES: protein motif:HMM:PF00171.20"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HIC67639.1"
                     /translation="MIMDHRAMYIDGRWQDFPDLDRIEVENPADERVIATIPEADAVI
                     ARQALSAAKAAQQTWAARPAIERAQAVRALAALVEQSAETLAVSLVAEQGKPISQARG
                     EVAGAVTFLTHAAESARRI"
     gene            complement(550..1308)
                     /locus_tag="EYO87_16920"
     CDS             complement(550..1308)
                     /locus_tag="EYO87_16920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018458756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp/Glu/hydantoin racemase"
                     /protein_id="HIC67640.1"
                     /translation="MRILLINPNTSTSLTALLSNAARRVASESTVLDEVTATRGVPYI
                     STRSEALLAGVELLEILARRRQDYDAAIVAAFGDPGLGAARELFDLPVVGLAEAGMLT
                     ACMLGKRFAIVTFSTALGPWYRECLEWHGLKDRSAGIFTLDEPFDDIATVQGDKTEML
                     VRLSNRAITEGEADVIVLAGAPLAGLATKVRDRLPVPVVDCAEAAMKQAEALAALRPA
                     PPRAGTFRRPDPKSSIGLAPVLADYIAHRCDRAS"
     gene            complement(1322..1498)
                     /locus_tag="EYO87_16925"
     CDS             complement(1322..1498)
                     /locus_tag="EYO87_16925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014292151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HIC67641.1"
                     /translation="MMTPPVGVVLFVMCGITKVSMASMIRNVWPFVTVQYLVLLLCLF
                     VPGLVTWLPRILGY"
     gene            1452..>1910
                     /locus_tag="EYO87_16930"
     CDS             1452..>1910
                     /locus_tag="EYO87_16930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010397763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HIC67642.1"
                     /translation="MPHITKSTTPTGGVIIPATRYHHRLVHLGLQTFAVVAGRVPPGP
                     HRFYDAMCDLFRGPRPPGLPVEDRRLGGVPCRIYGKDTRICVIYVHGGGYVVGGLDSH
                     DDICAEIADATGLRTISVGYRLAPEHRWPAQIEDVIAVWHALSRPAVVVGD"
BASE COUNT          370 a          615 c          595 g          330 t
ORIGIN      
        1 gatgcggcgg gcgctttccg ccgcgtgagt gaggaacgtg acggcccccg cgacctcgcc
       61 acgagcttga ctgatgggtt tgccctgttc ggccacaagc gagacggcga gggtttcggc
      121 actctgctcg accagcgccg ccagcgcccg cacagcctgc gcccgctcga tcgcggggcg
      181 ggccgcccat gtctgctgcg cggccttcgc ggcagacaat gcctggcggg cgatcacggc
      241 gtcagcctcg ggtatcgtgg cgatgacacg ctcgtcggcg gggttctcga cctcgatccg
      301 gtcaaggtct ggaaaatcct gccagcggcc gtcgatatac atcgcgcgat ggtccatgat
      361 cacccttttg gtcctaccat aaaatgaggg tgtgtcaaag gatgggaaag atgtcaaaga
      421 aaaacgcgcg acgatatata tttcgtctga ccgaatccgc gattcgatca gtcagccaag
      481 aagcgggatt tgccgaaggt gatgcaatgg gaaccccatc gagaggacac cgcgcagttc
      541 agctttggcc tatgaagccc tatcgcaacg atgcgcaata tagtcggcga gaacgggcgc
      601 caagccgatg gatgacttcg gatcagggcg tcggaacgtg cccgcccgtg gcggcgccgg
      661 ccgcagagcg gcaagtgctt cggcctgttt catcgcggcc tcggcacaat cgacgaccgg
      721 gaccggcagc ctgtctcgga ctttcgtcgc cagcccggcc agcggggcgc cggcgagaac
      781 aatcacatcc gcctcgccct cggtgatcgc ccggttcgac aatctcacca gcatttcggt
      841 cttgtcgccc tgaacggtcg cgatgtcgtc gaagggctcg tccagcgtga agatgccggc
      901 cgaacgatcc ttcagtccat gccattccag acattcgcga taccacgggc ccaaggcggt
      961 cgagaaggtg acgatggcga agcgcttgcc cagcatgcac gcggtcaaca tcccggcctc
     1021 ggccaggccg acgacgggaa gatcgaacaa ttcgcgcgcc gcgcccagcc ctggatcgcc
     1081 gaaagccgca acgatcgccg cgtcgtaatc ctgtctgcgc cgggcaagaa tttccagcag
     1141 ttccacccct gccagcaagg cctcgctgcg ggtcgagata tagggcacgc cacgggttgc
     1201 ggtaacctcg tcaagcacgg tggattccga cgccacgcgg cgggccgcat tcgacagaag
     1261 cgccgtcagc gatgtcgagg tgttcggatt gatcaataga attcgcatgg gatcttgtct
     1321 ttcaatagcc aaggatgcgg ggcaaccacg tcaccagtcc aggaacgaaa aggcacagca
     1381 gcagcaccag atactggacc gtcacgaacg gccagacatt gcggatcatc gaggccatgc
     1441 tgaccttcgt gatgccgcac atcacgaaaa gcacgacacc gacgggtggc gtcatcattc
     1501 cggcaacgag ataccatcat cggctcgtcc acctcgggct tcaaactttc gcggttgtgg
     1561 cagggcgcgt cccacccgga ccgcatcgtt tctacgacgc gatgtgcgac ctcttccgcg
     1621 gcccccgtcc gcccggattg ccggtcgagg accgcaggct gggcggcgtc ccgtgccgga
     1681 tctacggcaa ggataccagg atctgcgtga tctatgtcca tggcggcgga tatgtcgtcg
     1741 gcgggttgga cagccatgac gacatatgcg ccgagattgc ggacgccacc gggctgcgga
     1801 ccatttcggt cggttaccgc ctcgcccccg aacatcgctg gcccgcccag atcgaggatg
     1861 tgatcgccgt ctggcacgcc ctgagccgcc ccgccgtagt tgtcggcgac
//
LOCUS       DTVW01001270            4724 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_529996, whole
            genome shotgun sequence.
ACCESSION   DTVW01001270 DTVW01000000
VERSION     DTVW01001270.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 4724)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4724)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4724
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_529996"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1199)
                     /locus_tag="EYO87_16935"
     CDS             complement(<1..1199)
                     /locus_tag="EYO87_16935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008186947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C4-dicarboxylate ABC transporter permease"
                     /protein_id="HIC67643.1"
                     /translation="MDNILNAFTMIADPSVLGVIIASSLFGLFVGAIPGLSATMATAL
                     LVPLTFFMDPLPAIASIVSAVAMAIFAGDIPGAMLRIPGTPASAAYVDDAYQMTLRGE
                     AERALGIGLVSSVFGGFVGAIILTLGAPFLAEFAFQFSTVEYFWLAVLGLSCSVIISR
                     GSPIKGLVSLLIGLFISTIGIDVTGGYPRFTFGSVDLMGGVSFIPAMIGMFAVTEILR
                     FSMNASHQTSSAPKSNSTVYGGQWKMVRENKRHLVSGSLIGTVIGILPGAGADIAAWV
                     AYAMAKKISRTPAKFGTGHPEGLASAGAANNAALSGVWIPALVFGIPGDSVTAIAVGV
                     LFMKGITPGPMVFVQQADLTYAIFLTFFLSNLLLLVLGYFAIRGARFVVQTPARLLMP
                     VILLFCIV"
     gene            complement(1218..1691)
                     /locus_tag="EYO87_16940"
     CDS             complement(1218..1691)
                     /locus_tag="EYO87_16940"
                     /inference="COORDINATES: protein motif:HMM:PF07331.9"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter TctB
                     family protein"
                     /protein_id="HIC67644.1"
                     /translation="MKISDRLTGFVLLLFATAILVEASRFPLIPGLSIGSGLLPMIVA
                     SGLILCSLVLIVKDMIARPRPKLAEPGDWISDHRRLIRVAIVLLGTASFIPLLDVIGF
                     PVLSIAMLLAFLLSLRVDVMTSVLVSVTASLAIHTLFSKVFLVPLPWGILQSVAW"
     gene            complement(1848..2849)
                     /locus_tag="EYO87_16945"
     CDS             complement(1848..2849)
                     /locus_tag="EYO87_16945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006462785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HIC67645.1"
                     /translation="MHVRRMFMLRNFFTLGLGAAAFAAGTFVLSESALAEYPERPITW
                     IVPWGAGGGTDATSRMLAGLMEQELGVPVNVVNRDGGSGVVGHSAIANAQPDGYTIGT
                     VTVEIAMMRHAGLTDLDYSDYTPIGLFNADPAAFHVRADSEFDTLPAFLEAAKADPGK
                     MKASGTGQGGIWHLAMAGLLVESGLAPDTVPWVPSKGAAAGLQDLVSGGVDIVASSYP
                     EAASLISAGKVKSLAVMGDEPLADVPDLPTVKSETGIDLTVSTWRGLAGPAGLPDDVV
                     ARLSTALEAAWKSEEFTAFMAERGFGKVWLDGPGFGKFMADADAANGMVMKAAGLAK"
     gene            complement(3050..4360)
                     /locus_tag="EYO87_16950"
     CDS             complement(3050..4360)
                     /locus_tag="EYO87_16950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009824395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease"
                     /protein_id="HIC67646.1"
                     /translation="MIVSTGLASAVLVGGFLLLVLIRVPVAFALGIATVPIVLLDIRL
                     TPFIVLDRMFQSYNSFVLLAVPFFLLAANLMNSGKITDRLIELARVLTGWMPGGLGHV
                     NVAVSMLFAGISGSSTADAAGCGRILIPAMVREGYDTRFAIAITACSSVMGVIIPPSI
                     LMVVWGGVMQVSVGALFLAGAIPGLLIGLALMGTVYAYAKVRNYPRAGRPNWSEFWHA
                     LKGAALAMLTPILVIGGIVGGIVTPTESAIIAAAYALILGMFVYRTVSLRDLGGIFYE
                     TGRFASISLFAIGTASAFGWMLAFFNVPRLIVEGMTSLQFGTFGTAIVIAALFLFFGL
                     FIDAIPTIIILGTVLLPVAAAADIHPVVFAIIGIVSLAFGLVTPPYGLCLLISAAIGG
                     MNVAQVMRDVVIILMPMLLILLLIILVPELALWLPRTLMPGAFR"
     gene            complement(4357..>4724)
                     /locus_tag="EYO87_16955"
     CDS             complement(4357..>4724)
                     /locus_tag="EYO87_16955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008036941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TRAP transporter small permease subunit"
                     /protein_id="HIC67647.1"
                     /translation="LWTEELATFIFVWVVMIGSMIAVWEGTHFDVRVTPDASRPLTIF
                     LQQGVVFLLIGCFALLFAWYGLEYARFGALQRSVMMQANKLVTFISVPIAGAVWAIFA
                     FYRLAETFSNYRASRKVTS"
BASE COUNT         1058 a         1472 c         1486 g          708 t
ORIGIN      
        1 acgatgcaga acagcaggat caccggcatc agcaaccgcg ccggggtctg aacgacgaac
       61 ctggcgccgc ggatcgcgaa atagcccagc accagcagca aaagattgga caggaagaag
      121 gtcaggaaaa tggcataggt caggtcggcc tgctggacga agaccatcgg accgggggtg
      181 atgcccttca tgaaaaggac gccgaccgcg atggcggtca cggaatcccc cggaatgccg
      241 aagaccagcg cggggatcca gacaccgctg agcgccgcat tgttggcggc gcccgccgag
      301 gcaagtccct ccggatgacc ggtgccgaac ttcgcgggcg tccgagagat cttcttggcc
      361 atggcatagg caacccaggc agcgatatcg gcgccggcgc caggcaggat gccgataacg
      421 gttccgatca ggctgcccga aaccagatgc cgcttgtttt cgcgcaccat cttccactga
      481 ccgccataga cggtggaatt ggatttgggt gcggaactgg tctggtgcga cgcgttcatg
      541 gaaaagcgca gtatttcggt cacggcgaac atgccgatca tcgccggaat gaaactgacc
      601 ccgcccatca ggtcgaccga tccgaaggtg aaacgcgggt aaccgccggt cacatcgatg
      661 ccaatggtcg agatgaaaag accgatcagc agtgacacca gccccttgat cggcgagccg
      721 cgcgaaatga tgacagagca gctaagcccc agaactgcca gccagaaata ctctaccgtg
      781 ctgaactgaa atgcgaattc ggcaaggaag ggcgccccga gggtcaggat gatggcgccc
      841 acgaagccgc cgaagaccga actgaccagc ccgatcccaa gcgcccgctc ggcctctccg
      901 cgcaaggtca tctgataggc gtcatcgaca taggcggccg aggctggggt tccggggatg
      961 cgcagcatcg cgccgggaat gtctccggca aagatcgcca tggcgacggc gctgacgata
     1021 gaggcgatcg ccggcagcgg atccatgaag aaggtaagcg gcaccagaag ggccgtggcc
     1081 atcgtggccg aaagccccgg aatcgccccg acaaacaggc cgaaaagcga cgaggcgatg
     1141 atgacgccaa gcaccgaagg atcggcgatc atggtgaaag cgttgagaat gttgtccatg
     1201 acgtgcccct tgtcgaccta ccaggcgacc gattgcagga tgccccacgg cagaggcacc
     1261 agaaagacct tgctgaacag ggtgtggatc gccagcgatg ccgttaccga caccaggacc
     1321 gaggtcatca cgtccacccg cagcgacagc aggaatgcca gaagcatcgc gatgctgagg
     1381 acaggaaacc cgatcacgtc cagcagcggg atgaagcttg ccgttcccag cagcacgatc
     1441 gccacccgga tcagacggcg gtggtcggaa atccagtcgc ccggttcggc cagttttggc
     1501 cgcggcctcg cgatcatgtc tttcacgatg agaacgagcg agcagaggat gaggcccgag
     1561 gccacgatca tgggcaacag gcctgaaccg atggacaatc ccgggatcaa cggaaagcgg
     1621 ctggcttcca ccaggatggc tgtcgcaaac agcaacagca cgaaacctgt caaacggtca
     1681 ctgatcttca tgtcgtctcc cgcaagttac cccgatttcc gacgatgatc cctgccggat
     1741 cgtccgggcg gtaatcagtc cgcccgggcg gcgtaccggt cgcggccggt ggcgcgaggg
     1801 tcggggatga tccggcgcaa cggcctgtgg ccgatgcgcc gggctggcta tttggcgagg
     1861 ccggcggcct tcatgaccat gccgttggca gcatcggcat cggccatgaa tttgccgaat
     1921 cccggtccgt ccagccagac cttgccgaaa ccgcgttccg ccatgaaggc ggtgaattct
     1981 tcggatttcc aggcagcttc cagcgcggtc gaaagcctgg cgacgacatc gtcgggcaag
     2041 ccggcgggcc cggccaggcc gcgccaggtg gaaaccgtca gatcaattcc ggtctctgat
     2101 tttacggtcg gcagatcggg cacgtcggca agcggctcgt cccccatcac cgcaagcgac
     2161 ttgaccttgc cggccgaaat cagcgaggcg gcctcgggat aggaggatgc gacgatatcg
     2221 acgccgcccg acaccaggtc ctgcaggcct gcggccgcgc ccttggatgg cacccagggc
     2281 accgtgtccg gagcaaggcc gctttcgacc agcagaccgg ccatggcaag gtgccagatg
     2341 ccgccctgac cggttcccga agccttcatc ttgcccggat cggccttggc ggcctcgaga
     2401 aaggccggaa gcgtatcgaa ttcggaatcg gcgcgaacgt ggaaggcggc cgggtccgca
     2461 ttgaacagcc cgatcggagt ataatccgaa taatccagat cggtcaggcc cgcgtgccgc
     2521 atcatggcga tctcgacggt cacggtgccg atcgtatagc cgtcgggctg cgcgttggcg
     2581 attgccgaat ggccgacaac gcccgatccg ccgtcacggt tgaccacgtt cacgggaacc
     2641 ccgagttcct gttccatcag cccggcaagc atccggctgg tggcgtcggt gccgccgccg
     2701 gcgccccagg gcacgatcca ggtgatcggc cgctcgggat attccgcgag ggcggactcg
     2761 gacagaacaa acgttccggc ggcaaacgcg gccgcgccga ggccgagagt gaagaaattg
     2821 cgaagcatga acatcctcct tacatgcatt tgattgtgac ctatccgcgc tcttcggtgc
     2881 ggttccggtc gtgaacgaag cgacatggcg cttcgaaact tgatcctatg acggctttcc
     2941 ggcttttcga cctcacgtta gcgatcttct tcggaccgtg tcatggccgg gccgcggcga
     3001 gcggcgggaa gaatagtgca tatcgccgtc cctcctgtct cgatccgttt caacggaacg
     3061 cgcccggcat cagggttcgc ggcagccaga gcgccagttc cggcaccaga atgatcagca
     3121 gcaggatcag cagcatcggc atcaggatga tgacgacatc ccgcatcacc tgcgcgacgt
     3181 tcattccgcc tatcgcggcc gagatcagca gacagagccc atagggcggc gtcaccagtc
     3241 cgaaggccag cgagacgatc ccgatgatcg cgaaaacgac cgggtggata tcggccgcgg
     3301 ccgccaccgg cagcagcacg gtgcccagga tgatgatggt gggaatcgca tcgatgaaca
     3361 ggccgaagaa caggaacagg gcggcaatga cgatcgcggt tccgaaagtg ccgaactgca
     3421 ggctggtcat gccctccacg atcagccggg gcacgttgaa gaaggccagc atccagccga
     3481 atgcggaggc ggtgccgatc gcgaacagcg agatcgaggc gaaccgcccg gtctcgtaga
     3541 agatgccacc cagatcgcgc agcgaaaccg tgcgatagac gaacatcccc aggatcaggg
     3601 cataggccgc ggcgatgatg gcgctttcgg tcggtgtcac gatgccgccg acgatgccgc
     3661 cgatcaccag aatcggcgtc agcatcgcca gcgccgcacc cttcagcgcg tgccagaact
     3721 cggaccagtt ggggcggccc gccctggggt agttgcggac cttggcatag gcatagaccg
     3781 tccccatcag cgccaggccg atcaacaggc cggggatggc gccagccagg aacagcgccc
     3841 cgacagaaac ctgcatcacc ccgccccaga ccaccatcag gatgctgggc gggatgatga
     3901 cgcccatcac cgacgaacag gccgtgatgg cgatggcaaa gcgggtatcg tagccttccc
     3961 tgaccattgc cgggatcagg atcctgccgc agccggccgc atcggcggtc gacgatcccg
     4021 aaatgccggc aaacagcatc gacaccgcca cattcacatg tccaagcccg ccgggcatcc
     4081 agcctgtcaa tactctggcc agttcgatca gccggtcggt gatcttgccc gaattcatca
     4141 gattggcggc cagcaggaag aacggcaccg ccagcaggac gaacgaatta taggactgaa
     4201 acatccggtc cagaacgatg aacggcgtca gacggatatc cagaagcacg atcggaaccg
     4261 tggcgatgcc aagcgcgaag gccacgggca cgcggatcag gacaagaagc agaaacccgc
     4321 caaccaggac ggcgctggcc aaacctgtag acacgatcat gacgtgacct ttcgcgatgc
     4381 gcgataattg ctgaaagtct cggccaggcg gtagaatgcg aagatcgccc agaccgcgcc
     4441 ggcgatcggc accgaaatga aggtgacaag cttgttggcc tgcatcatca cggatcgctg
     4501 caaggcgccg aacctcgcat attcaagacc gtaccaggcg aaaagcaggg cgaagcagcc
     4561 gatcagcagg aacacgacgc cctgctgcag aaagattgtc agcgggcggc ttgcgtcggg
     4621 cgtcacccgg acatcgaaat gggtgccttc ccagaccgcg atcatcgacc cgatcatgac
     4681 cacccagacg aagatgaagg tggcgagttc ctcggtccac agat
//
LOCUS       DTVW01001271            1546 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_540796, whole
            genome shotgun sequence.
ACCESSION   DTVW01001271 DTVW01000000
VERSION     DTVW01001271.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1546)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1546)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1546
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_540796"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..107)
                     /locus_tag="EYO87_16960"
     CDS             complement(<1..107)
                     /locus_tag="EYO87_16960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005794171.1"
                     /note="functions in MreBCD complex in some organisms;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein"
                     /protein_id="HIC67648.1"
                     /translation="MAFGGLFSTDIAIDLGTANTLIYVKGKGIILNEPSV"
     gene            complement(471..>1546)
                     /locus_tag="EYO87_16965"
     CDS             complement(471..>1546)
                     /locus_tag="EYO87_16965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017997916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HIC67649.1"
                     /translation="CGATTINIPDTVGYTAPRESADLIRMLIERVPGADDIIFATHCH
                     NDLGMATANSLAAVEAGARQIECTINGLGERAGNTALEEVVMALRVRHDIMPFDTGID
                     TTKIIGLSRRVAQVSGFPVQFNKAIVGKNAFLHESGIHQDGVLKNVETFEIMRPADIG
                     LNETNIAMGKHSGRAALRAKLKDLGYEVGDNQLKDIFVRFKALADRKKEVYDEDIVAL
                     VQDAAANTEDDHLQVKHLRVVCGSDGQSADLTMIVDGEERTVHAVGDGPVDACFNAVK
                     QIFPHDARLQLYQVHAVTEGTDAQATVSVRMEEDGRIVNGQAADTDTILASVKAYVGA
                     LNHLIVRRARTGRDDKQISMYSH"
BASE COUNT          242 a          512 c          491 g          301 t
ORIGIN      
        1 accgagggct cgttcaggat gatgcccttg cccttgacat agatcagcgt gttcgccgtg
       61 ccgaggtcga ttgcgatatc ggtcgaaaac aaaccgccga atgccatgcc cgtagtcccc
      121 tgttcgcacc gggttgatcc cggcctgccc gaatttcacg ccccgcacag ccggcgggaa
      181 tcgcccccgg tgcgggcctc gcccggtata gaagccctca ggcccaagcg aaagccctgt
      241 ctagcgccgc ccggcacaac cgcgctgtgc cgggcggcgg ggtgcggcga ccgtgccaca
      301 acgcgcggcg gcggaccgcc ccttcggatc cttgcatcat ccgtggcgcc gatggcaggc
      361 ggtttccggg acgtggcagg gcgtccccgc tttcgcatca tcgggccaat cgcatccgcg
      421 cggggaatgc cccgcaggct tgcgggcggg cttccatccg cgccagggga tcaatgcgaa
      481 tacatgctga tctgcttgtc gtcccggccc gtgcgggcgc ggcgcacgat caggtggttc
      541 agcgcgccga cataggcctt gaccgaggcc aggatcgtgt cggtatcggc cgcctgcccg
      601 ttcacgatgc ggccgtcttc ctccatccgg acgctgaccg tggcctgcgc atcggtgcct
      661 tcggtgacgg catggacctg atacaattgc agccgcgcgt catgcgggaa gatctgcttg
      721 accgcgttga aacaggcatc gaccgggccg tcgcccaccg catggacggt ccgttcctcg
      781 ccatccacga tcatggtcag atcggcgctc tgtccgtcgc ttccgcagac gacgcgcaga
      841 tgcttgacct gcagatgatc gtcctcggta tttgcggcgg cgtcctggac aagcgcgacg
      901 atatcctcgt catagacctc tttcttgcga tcggcgagcg ccttgaaccg cacgaagatg
      961 tccttcaact ggttgtcgcc gacctcgtag cccagatcct tcagcttggc ccgcagcgcc
     1021 gcgcggcccg aatgcttgcc catcgcgatg ttggtttcgt tcaggccgat atcggccggg
     1081 cgcatgattt cgaaggtctc gacattcttc agcacgccgt cctgatggat gccgctttca
     1141 tgcaggaagg cgttcttgcc gacgatggcc ttgttgaact ggaccggaaa gccggaaacc
     1201 tgcgccaccc gacgcgacag gccgatgatc ttggtggtgt cgattccggt gtcgaaaggc
     1261 atgatgtcgt gacgcacgcg cagcgccatc accacctctt ccagcgcggt gttgccggcg
     1321 cgttcgccca gcccgttgat ggtgcattcg atctggcggg cgccggcctc gaccgctgca
     1381 aggctgttgg ccgtcgccat gcccaggtcg ttgtggcaat gggtggcgaa gatgatgtca
     1441 tccgcgccgg gcacccgttc gatcagcatc cggatcagat cggcggattc gcgcggtgcg
     1501 gtatagccca ccgtatcggg gatattgatg gtcgtggcgc cgcacc
//
LOCUS       DTVW01001272            1398 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_546815, whole
            genome shotgun sequence.
ACCESSION   DTVW01001272 DTVW01000000
VERSION     DTVW01001272.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1398)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1398)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1398
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_546815"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            109..747
                     /locus_tag="EYO87_16970"
     CDS             109..747
                     /locus_tag="EYO87_16970"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: protein motif:HMM:PRK05426.4-2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HIC67650.1"
                     /translation="MRVVVGLGNPGARYARTRHNIGFLVAADLAAGSGWVDRWSAQTA
                     TLRIAGETVLIVRPQTYMNRSGDAVLALSELEGFALEETLVVFDDFLLDFGRIRLRRS
                     GSDGGHNGLSSIIEGLRTDAVPRLRLGVGPVPESAAAPVPTSPTGSRDRCGSAGAAGC
                     HRCPRRSWPAAAVSAGDARPAGARPAIPPAAGAGGHRNPRSVQAWRETPRRL"
     gene            complement(894..>1398)
                     /locus_tag="EYO87_16975"
     CDS             complement(894..>1398)
                     /locus_tag="EYO87_16975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012178164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tRNA (adenosine(37)-N6)-dimethylallyltransferase
                     MiaA"
                     /protein_id="HIC67651.1"
                     /translation="GDALVAGKEGLARMIAGLDARTRDRIDLRNPARVQRAWEVWRAT
                     GRGLAEWQADTPPPLITPARSQRLVVTADRDWLADRIARRFDLMMEQGALDEVRAMLP
                     LWDMSRQWARAIGAPELAASLRGETDRAEAVQRAVIATRQYAKSQRIWFRSRMHDWQP
                     WPAGESP"
BASE COUNT          222 a          483 c          483 g          210 t
ORIGIN      
        1 gaaggcgagg agggcgagga aggcgaggaa ggcgccggca ccggcaccgc cgcggccgag
       61 accgagggcg gtgcctcgga caccgacgcc tgatcgacac cgtcttccgt gcgcgtcgtc
      121 gtcgggctgg gcaaccccgg ggcccgctac gcccgcaccc ggcacaacat tggctttctc
      181 gtcgccgccg acctggctgc cggcagcggt tgggtcgatc ggtggtcggc gcagacggcc
      241 accctgcgga tcgccggcga gacggttctc atcgtcaggc cgcagaccta catgaaccgc
      301 agcggcgacg cggtgctcgc actgagcgag ttggagggat ttgcgctaga ggaaacactc
      361 gtcgtattcg acgactttct cctcgacttc gggcggatac gcctgcggcg ctccgggtcg
      421 gacggcggcc acaacggtct atcgtcgatc atcgaagggc tgcgcaccga tgcggtgccg
      481 cgcctgcgcc tcggcgtcgg gcccgtgccg gaaagcgcag ccgcacccgt cccgacatca
      541 cccacaggat cacgtgatcg ctgcggatct gcgggcgcgg cggggtgcca tcgctgcccc
      601 agacgaagct ggccagcggc agcagtttca gcgggcgatg cgcggccggc cggcgcccgg
      661 cctgccatcc cccctgccgc cggcgccggg gggcatcgga atcctcgatc ggtgcaggcg
      721 tggcgggaaa cgccgcgacg cctttgaagc cgggggacgt gaagggaaag cgaaccgttt
      781 cgccggcttg ggacagattc accgacagac ctcaccaaga gtaaacaacc ataggtagaa
      841 tggcctgttt tcgtggcgtt ttcaatcctc ggttcgatac aattcaagcg atatcaaggg
      901 gattctccgg cgggccacgg ttgccagtca tgcattcgac tgcgaaacca gatgcgctgc
      961 gacttggcat attggcgggt ggcgatcacc gcgcgctgca cggcctcggc ccgatcggtt
     1021 tcgccgcgca ggctggccgc cagttccggc gcgccgatgg cgcgggccca ttgccgggac
     1081 atgtcccaca gcggcagcat ggcgcgcacc tcgtccaggg caccctgttc catcatcaga
     1141 tcgaagcgcc gcgcgatccg gtccgccagc cagtcgcgat cggcggtgac gacaaggcgc
     1201 tggctgcgcg cgggcgtgat caggggcggc ggcgtatcgg cctgccattc cgcaagcccg
     1261 cgaccggtcg cgcgccagac ctcccaggcg cgctggacac gggccggatt gcgcaggtcg
     1321 atccggtcgc gggtccgcgc atccagcccc gcgatcatcc gcgcaagtcc ttccttgcct
     1381 gccaccaggg catcgccc
//
LOCUS       DTVW01001273            1058 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_548882, whole
            genome shotgun sequence.
ACCESSION   DTVW01001273 DTVW01000000
VERSION     DTVW01001273.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1058)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1058)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1058
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_548882"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>1058
                     /gene="tolB"
                     /locus_tag="EYO87_16980"
     CDS             <1..>1058
                     /gene="tolB"
                     /locus_tag="EYO87_16980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011747031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tol-Pal system protein TolB"
                     /protein_id="HIC67652.1"
                     /translation="PAFFGDDEVARKVREVVADDLTGTGLFREIPADAQTAKRGSFTE
                     PVSYEDWRAVNAQALVSAEVTRQGEDISVKFRLFDVFAGQPQGDGMQFDARAGDWRRA
                     AHKIADQVYSRLTGESPYFDSRVAFVQETGPKDARIKRIGVMDYDGANPLWMTDSSSL
                     VLAPQFSADGRQIVYTSFESGFPQLRILDVASVQSRPATQGGDSMAFAPTFSPDGRWI
                     AYSLERNGNTDIWLMDAATGAQRPLTEAPSIETSPSFSPDGKRIVFESDRSGTPQLYI
                     VGIDGGEPTRISFGEGRYGSPAWSPKGDMIAFTHQEGEKFFIGIMRTDGSEEKKLTES
                     FLDEGPTWDPNGRVVMFTR"
BASE COUNT          203 a          328 c          339 g          188 t
ORIGIN      
        1 ccggccttct tcggcgatga cgaggtggcg cggaaggtgc gcgaggtcgt ggccgacgat
       61 ctgaccggca ccggcctgtt ccgcgaaatc cccgccgatg cgcagaccgc aaagcgcggc
      121 agcttcaccg agcccgtgtc ctacgaagac tggcgggctg taaacgcgca ggcactggtc
      181 agcgccgaag tcacccgcca gggcgaggat atcagcgtca agttccgcct gttcgatgtc
      241 tttgcgggcc agccccaggg cgatggaatg cagttcgacg cccgcgcggg cgattggcga
      301 cgtgccgccc acaagatcgc cgatcaggtc tattcacggc tgaccggtga aagcccgtat
      361 ttcgacagcc gcgtggcctt cgtccaggaa accgggccga aggacgcaag gatcaagcgg
      421 atcggggtga tggattacga cggggcgaac ccgctgtgga tgaccgattc gtcctcgctg
      481 gttctggcgc cgcaattttc cgccgacggt cgtcagattg tctataccag cttcgaatcg
      541 ggatttccgc agcttcgcat cctcgatgtc gcctcggtcc agtcgcgtcc ggcgacgcag
      601 ggaggcgaca gcatggcatt cgcaccgacc ttcagccccg atggccgctg gatcgcctat
      661 tcgctggaaa ggaacggcaa taccgatatc tggctgatgg acgcggcgac cggcgcccag
      721 agaccgctga ccgaagcgcc ttcgatcgaa acctcgccca gtttcagccc cgatggcaag
      781 cggatcgtct tcgaatccga tcgctcgggg acgccccaac tctatatcgt gggaatcgat
      841 ggcggcgagc cgacgcggat cagctttggc gaaggtcgct atggatcgcc cgcctggtcg
      901 cccaagggcg acatgatcgc cttcacccac caggagggtg aaaagttttt catcgggatc
      961 atgcgcaccg atggatcgga agagaagaaa ttgaccgaat cgtttcttga cgaggggccg
     1021 acctgggacc ccaatggccg cgtcgtgatg ttcacgcg
//
LOCUS       DTVW01001274            1427 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_550389, whole
            genome shotgun sequence.
ACCESSION   DTVW01001274 DTVW01000000
VERSION     DTVW01001274.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1427)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1427)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1427
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_550389"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..294)
                     /locus_tag="EYO87_16985"
     CDS             complement(<1..294)
                     /locus_tag="EYO87_16985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011540015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DSD1 family PLP-dependent enzyme"
                     /protein_id="HIC67653.1"
                     /translation="MNAPANFDNLEVGFDVPALPGMDESEIQTPCLILDLDALERNIR
                     KMGDYARAHGMRHRSHGKMHKSVDVQKLQESLGGAVGVCCQKVSEAEVFVRGGI"
     gene            complement(291..1268)
                     /locus_tag="EYO87_16990"
     CDS             complement(291..1268)
                     /locus_tag="EYO87_16990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005670254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-phosphate dependent enzyme"
                     /protein_id="HIC67654.1"
                     /translation="MKDIAMDIPTYDDMLVAHDRIKPHIRRTPVRTSDYLNDLTGAQL
                     FFKCENFQEPGAFKVRGASNAVFGLSDDQAKRGVATHSSGNHASCLSYAAMRRGIPCH
                     VVMPRTAPQAKKDTVRRYGGQITECDPSTSSREATFAKVQEATGGDFVHPYNDPRVIA
                     GQGTCAKELMEQADGLDIVTAPIGGGGMISGTCLTLATLSPQTRVIAAEPEQADDAYR
                     SFKAGHIIADDAPKTIADGLLVPLKDLTWHFVSNHVSDIYTASDAEIVDAMKLIWKHL
                     RVVMEPSSAVPLATILKNRDAFAGKRVGIIITGGNVDLDRLPWTQGEAS"
     gene            complement(1268..>1427)
                     /locus_tag="EYO87_16995"
     CDS             complement(1268..>1427)
                     /locus_tag="EYO87_16995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010395294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="serine--glyoxylate aminotransferase"
                     /protein_id="HIC67655.1"
                     /translation="LGMLTDVMALSGIATAEMVMADLGLPITLGSGVAAAQDHYRQSA
                     AGSQRAAA"
BASE COUNT          224 a          470 c          455 g          278 t
ORIGIN      
        1 gatgccgccg cggacaaaga cctcggcctc gctgaccttc tggcaacaga caccgaccgc
       61 gccgcccagg ctttcctgca atttctgcac gtccacggac ttgtgcatct tgccgtggct
      121 gcggtggcgc atcccgtgtg ccctggcgta atcgcccatc ttcctgatgt tgcgctccag
      181 cgcgtccaga tcgaggatca ggcagggtgt ctggatttcg ctttcatcca tgccgggcag
      241 cgccggcacg tcgaagccga cttccagatt gtcgaagttc gcgggtgcgt tcatgacgcc
      301 tctccttggg tccagggcag cctgtccaga tcgacattgc cgccggtgat gatgatgccg
      361 acgcgcttgc cggcgaatgc gtcgcggttt ttcaggatgg tggccagcgg cacggcgctg
      421 ctgggctcca tcaccacgcg cagatgtttc cagatcagct tcatcgcatc gacgatctcg
      481 gcgtcggacg cggtatagat gtcggagacg tggttgctga cgaaatgcca ggtcaggtcc
      541 ttgagcggca ccagcaaccc gtcggcgatg gtcttgggcg catcatcggc gatgatgtgg
      601 ccggccttga agctgcgata ggcgtcatcg gcctgttccg gctcggccgc gatcacccgc
      661 gtctggggcg acagcgtcgc cagcgtcagg caggtgcccg aaatcatgcc gccgccgccg
      721 atcggggcgg tgacgatatc cagcccgtcg gcctgctcca tcagttcctt ggcgcaggtg
      781 ccctgccccg cgatcacgcg cgggtcgttg tagggatgga cgaaatcgcc ccccgtcgcc
      841 tcctgcacct tcgcaaaggt cgcctcgcgc gagctggtcg agggatcgca ctcggtgatc
      901 tggccgccat agcggcgcac ggtgtccttc ttggcctgtg gcgcggtgcg cggcatcacc
      961 acatggcagg gaataccccg ccgcatcgcc gcgtaggaca ggcacgaggc gtgattgccc
     1021 gaggaatgcg tggccacgcc ccttttcgcc tgatcgtcgc tcagcccgaa gaccgcgttg
     1081 ctggcgccgc ggaccttgaa ggcccccggt tcctggaaat tctcgcattt gaagaacagc
     1141 tgcgcgccgg tcagatcgtt caggtaatcc gatgtccgga ccggcgtgcg ccggatatgc
     1201 ggcttgatcc gatcatgcgc gaccagcatg tcgtcatagg tgggaatatc catagcgatg
     1261 tccttcatca tgcggctgcc cgctggctgc cggcggcgct ctggcgataa tgatcctgcg
     1321 ccgcggcgac gccgctgcca agcgtgatcg gcaggcccag gtcggccatg accatttccg
     1381 ccgtggcaat gcccgacagc gccatcacgt ccgtcagcat gcccaga
//
LOCUS       DTVW01001275            1083 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_552024, whole
            genome shotgun sequence.
ACCESSION   DTVW01001275 DTVW01000000
VERSION     DTVW01001275.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1083)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1083)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1083
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_552024"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..330
                     /locus_tag="EYO87_17000"
     CDS             <1..330
                     /locus_tag="EYO87_17000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_353894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HIC67656.1"
                     /translation="NGYELVSGAIRNHKPEIMFKAFELAGYPASEVEKRFGGMVKAFR
                     FGAPPHGGCAAGIDRIVMLLADEQNIREVIMFPMNQRAEDLMMGAPSEPANDQLRDLR
                     LRVLPKE"
     gene            415..>1083
                     /locus_tag="EYO87_17005"
     CDS             415..>1083
                     /locus_tag="EYO87_17005"
                     /inference="COORDINATES: protein motif:HMM:PF08811.9"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1800 family protein"
                     /protein_id="HIC67657.1"
                     /translation="MIAYPELAAIRLGYGLSPLMAAPVDPAQVLASVAGAGPDADAIS
                     VASISAMQRDLVRLRRRAKAGDRKARAQADDIGALSDRMIALAQRREMARALDAPAGF
                     GERLVRFWSDHFTVRGGNSERRLLGVSLVDEAIRPHLGGSFADMMFAAETHPAMLLYL
                     SQQGSVGPNSRFARKRGGGLNENLAREMIELHSLGVGADYTQADVRQLAELLTGLRYH
                     RDRGI"
BASE COUNT          171 a          342 c          376 g          194 t
ORIGIN      
        1 aacggctatg aactggtcag cggcgcgatc cgcaaccaca agcccgagat catgttcaag
       61 gctttcgaac tggcgggtta tcccgcatcc gaggtcgaaa agcggtttgg cggcatggtc
      121 aaggcgttcc gctttggcgc gccgccgcat ggcggctgcg cggccgggat cgaccggatc
      181 gtgatgctgc tggcggatga gcagaatatc cgcgaggtca tcatgttccc gatgaaccag
      241 cgcgcggaag acctgatgat gggtgcgccc tccgaacccg cgaacgacca gcttcgcgac
      301 ctgcgtctgc gggtcttgcc aaaagagtga tctgacaccc cgcgcctgct gtgccacgat
      361 ccgcgccagg ggcagtcctg cctgcggcgg gccgtgcttt tgcaggggat gtgaatgatc
      421 gcctatcccg aacttgccgc gatccggctg ggctatggtc tgtcgccgct gatggcggcg
      481 ccggtggatc cggcgcaggt tctggcctcg gtcgccgggg cgggaccgga cgccgacgcg
      541 atcagcgtgg cgtcgatttc cgcgatgcag cgcgatctgg tgcgcttgcg tcggcgtgcc
      601 aaggccggtg accgcaaggc ccgcgcacaa gccgacgaca tcggcgcgct ctcggaccgg
      661 atgatcgcgc tggcgcagcg ccgcgaaatg gcgcgcgcac tggacgcccc ggcggggttc
      721 ggcgaacggc tggtccggtt ctggtcggat cacttcaccg ttcgcggcgg caacagtgaa
      781 cggcggcttc tgggcgtttc cctggtggat gaggcgatcc gcccccatct gggcggaagc
      841 tttgccgata tgatgttcgc cgccgagacg catcccgcga tgctgctgta tctcagccag
      901 cagggttctg tcgggccgaa ttcccgtttc gcccgaaagc ggggcggcgg tctgaacgaa
      961 aaccttgccc gcgagatgat cgaactgcac agcctcggcg tcggtgcgga ctacacgcag
     1021 gccgatgtcc ggcaactggc cgagttgctg accgggctgc gctatcatcg tgaccgcggc
     1081 att
//
LOCUS       DTVW01001276            2426 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_555032, whole
            genome shotgun sequence.
ACCESSION   DTVW01001276 DTVW01000000
VERSION     DTVW01001276.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2426)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2426)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2426
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_555032"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..461)
                     /locus_tag="EYO87_17010"
     CDS             complement(<1..461)
                     /locus_tag="EYO87_17010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008214509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HIC67658.1"
                     /translation="MPASKEFDLIVIGGGTGGNGVARMAAGAGWKVASIDSLPFGGTC
                     ALRGCDPKKMLVAVTEGIEQARNLDGKGLKTRPSVDWPDMIAFKRSFTDAMPGRIEGG
                     LEKAGVTVLHGQARFTGPDRIVVNGETLSARHFHIATGARPMTLNIPGEELL"
     gene            complement(594..1652)
                     /locus_tag="EYO87_17015"
     CDS             complement(594..1652)
                     /locus_tag="EYO87_17015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011536972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C4-dicarboxylate ABC transporter
                     substrate-binding protein"
                     /protein_id="HIC67659.1"
                     /translation="MLTKTITTAAALAMAALLAIPAAAQEYTLRAVANSNESDEDYDG
                     LQVFKSYVESASNGAIAVEIYMGTQLCSNGAECLQGVADGSIDVYISTSGGAAGLFPY
                     VQVLDLPYLMQDDRVAEKVLSGDFTRTMREMALEDSGGAIRLMTIGNTGGWRNFANTK
                     RRVQTPADLKGMKIRTVVADLPQELVRTLGAAPTPIPWPELFTSLQTGVVDGTKNGIT
                     DIMSMKFPEAGLQYLTLDGHAYMGALWWMSNERFMAMPEDMRRVVVDGFYQLQQATFA
                     SPKRKSIPAYEEFVQGGGDLYVPTPEEKQAFADAARPVYEWFTANVEGGQEIFDAMKG
                     AVETANQELDTERARDIQ"
     gene            complement(1682..>2426)
                     /locus_tag="EYO87_17020"
     CDS             complement(1682..>2426)
                     /locus_tag="EYO87_17020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011568511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TRAP transporter large permease"
                     /protein_id="HIC67660.1"
                     /translation="VGLMALIKIMADRYDFPVASRRYGWGERGQASLKAFFPLMTPVI
                     ILGGILAGVFTPTEAAAVAVFYALVISLFVLRTLRLSELPDVLGRAGITSAVVLLLVG
                     AAMSFKTVVSLSQAPQMMADVILTLTENPLLMLFLINLLLFVVGMFLDAGPAIIILGP
                     ILAPVFTQLGVDSVHFAIIMCVNLTVGLATPPMGLVLFVASAVSGERVTTIARAILPF
                     LAVEILVIFLITYFPAISMTIPRLTGFAN"
BASE COUNT          430 a          827 c          755 g          414 t
ORIGIN      
        1 agaagctctt cgccgggaat gttcagcgtc atcggccggg cgccggtggc gatgtggaag
       61 tggcgtgccg acagggtttc gccattcacc acgatccggt cggggccggt gaaccgtgcc
      121 tggccatgca gcaccgtgac gccggctttc tccagcccgc cctcgatacg gccgggcatc
      181 gcgtccgtga agctgcgctt gaaggcgatc atgtccggcc aatcgaccga aggccgtgtc
      241 ttcaggccct tgccgtccag gttgcgggcc tgttcgatcc cctcggtcac ggcgaccagc
      301 atcttcttgg gatcgcagcc tcgcaatgca caggtgccac cgaagggcag gctgtcgatg
      361 ctggccacct tccagccggc gccggcagcc atccgggcga ccccgttccc gccggtcccg
      421 ccgccgatga cgatcagatc gaattccttg ctggcaggca tgattttccc cctcgcggtt
      481 tgctgccgcc gcccggttgg cccaatcgcc cccggcttac gggctgcgcg cgctgcgcga
      541 cgccgcgccc tgcgggatca tcgcggaccc ccgcaggtcc gcccgccaag gcgtcactgg
      601 atatcgcggg cgcgttccgt gtccagttcc tggttcgcgg tctcgacagc gcctttcatg
      661 gcgtcgaaga tttcctgccc gccctcgaca ttggcggtga accattcata gaccggccgg
      721 gcggcatcgg caaaggcctg cttttcctcc ggcgtcggca catagagatc accgccgccc
      781 tggacgaatt cctcataggc ggggatcgac ttgcgcttgg gcgaagcgaa ggtggcctgc
      841 tgaagctggt agaatccatc gaccacgacc cggcgcatgt cttcgggcat ggccatgaac
      901 ctctcgttgg acatccacca cagcgcgccc atgtaggcgt gcccgtccag cgtcaggtat
      961 tgcagcccgg cctcggggaa tttcatcgac atgatgtcgg tgatgccgtt cttggtgccg
     1021 tccaccacac cggtctgcaa cgaggtgaac agttcgggcc aggggatcgg cgtcggcgcg
     1081 gcgcccaggg ttctgaccag ttcctgcggc aggtcggcga ccacggtgcg gatcttcatg
     1141 cccttcagat cggccggcgt ctggacgcgg cgcttggtat tggcaaagtt gcgccagccg
     1201 ccggtattgc cgatggtcat cagccggatc gcgccgcccg aatcctccag cgccatctcg
     1261 cgcatggtgc gcgtgaaatc gcccgacaga accttctcgg ccacgcggtc atcctgcatc
     1321 aggtagggca ggtccaggac ctgcacatag gggaacaggc cggccgcccc gcccgaggtc
     1381 gagatataga catcgatgga tccatcggcc acgccctgaa ggcattcggc cccgttcgaa
     1441 cacaattgcg tacccatgta gatctcgacc gcgatggcgc cgttcgaggc gctttccaca
     1501 taggacttga agacctgcag gccgtcgtaa tcctcgtcgc tctcgttgga attggcgacg
     1561 gcgcggaggg tatattcctg cgccgcggcc gggatcgcca gcagcgccgc catggccagc
     1621 gccgccgccg tcgtgattgt cttcgtcaac atcagatcct ccctcttggt tcgaatgaca
     1681 ttcagttcgc gaacccggtc agacgcggga tcgtcatgga gatcgcgggg aaataggtga
     1741 tcaggaagat caccaggatt tcgaccgcga gaaatggcag gatggcgcgg gcgatcgtcg
     1801 tcacccgttc ccccgacacg gccgaggcca cgaacagcac cagccccatc ggcggcgtgg
     1861 ccagcccgac ggtcaggttc acgcacatga tgatggcgaa atgcacgctg tccacgccca
     1921 gctgggtaaa gaccggcgcc aggatcggac ccaggatgat gatcgccggc cccgcatcca
     1981 ggaacatgcc gaccacgaac agcagcaggt tgatcagaaa cagcatcagc agcggattct
     2041 cggtcagcgt caggatcacg tcggccatca tctgcggcgc ctgcgacagc gacaccacgg
     2101 tcttgaacga catcgccgcc ccgaccagca gcagcaccac cgccgaggtg atgccggcgc
     2161 ggcccagcac gtcgggcagt tccgacaggc gcagcgtccg cagcacgaac aggctgatca
     2221 ccagcgcata gaacaccgcg accgccgccg cctcggtggg cgtgaacacg cctgccagga
     2281 tgccgcccag gatgatcacc ggcgtcatca gcggaaagaa cgccttcagg ctggcctgcc
     2341 cgcgttcgcc ccagccatag cgacgcgatg ccaccggaaa gtcgtagcgg tcggccatga
     2401 tcttgatcag cgccatcagc cccacg
//
LOCUS       DTVW01001277            2100 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_555476, whole
            genome shotgun sequence.
ACCESSION   DTVW01001277 DTVW01000000
VERSION     DTVW01001277.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2100)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2100)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2100
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_555476"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..715)
                     /locus_tag="EYO87_17025"
     CDS             complement(<1..715)
                     /locus_tag="EYO87_17025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67661.1"
                     /translation="MTTPPKARRYHASPSQSLRTAATGSDGRSDAAKAAPAKGIENVR
                     VELQRKVAMPTRHSESPVAGGTGSNPATDPPASPEPGSEAERERFMRTEPVDDGFPAL
                     GASQLDDKPAQSVRSDDEPDLKAKLQLIQEEQLTDRQLRIARRIALLHQIPVSSDQEA
                     VLRLRERGIDPSHRAALGQILSSEGSRAQAAPSANAPAIMPQPSPVAVPTPRKPGTEV
                     GPVRPQMPSREALTEERRAE"
     gene            complement(699..1352)
                     /locus_tag="EYO87_17030"
     CDS             complement(699..1352)
                     /locus_tag="EYO87_17030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011747558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HIC67662.1"
                     /translation="MLEFDNVSKSFWTGTQRKVILDRASFRVEPGHSLGILAPNGTGK
                     TTLVNMMCGLEKPDEGTIRSTSRISFPLGFMGGVVTKHSANENARYIARIYGLDPDYV
                     AAFTRWLTDIDEYFDMPVGTYSAGMRQRFTFSLLLALEFDIYLIDEGMPQTTDVEFNR
                     KAGSVLFERLRSATVVIVSHQPATIEKFCRSAAILRDGRLYMFESLDEAKQYYDYTA"
     gene            1513..2097
                     /locus_tag="EYO87_17035"
     CDS             1513..2097
                     /locus_tag="EYO87_17035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007427021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase family protein"
                     /protein_id="HIC67663.1"
                     /translation="MSDLSHRISACRLCAPRFAATATRHAPRPVTWFAPGARILVVGQ
                     APGMRVHQSGRPFTDRSGDRLRDWMGVDQATFYDRARIAIVPMAFCFPGYDGKGADLP
                     PPPICAATWRAQVLDLLQPDLTLLVGGHAMRWHLGAGNVTQTVAAWRDHAPAIFPLPH
                     PSWRNTGWLKRNPWFHADLLPALREAVAARLDAG"
BASE COUNT          322 a          670 c          707 g          401 t
ORIGIN      
        1 gttcggcccg ccgttcctcg gtcagcgcct cgcgagaggg catctgcggc cgcacggggc
       61 cgacctcggt gcccggtttt cggggcgtgg gaacggccac gggcgacggt tgcggcatga
      121 tcgccggcgc attggccgaa ggcgcggcct gcgcccggct cccttcgctt gacaggatct
      181 ggcccagagc cgcccggtgc gagggatcga tgccccgttc gcgcagccgc aacaccgcct
      241 cctggtccga tgaaaccggg atctggtgca gcagggcgat gcgccgggcg atccgaagct
      301 ggcggtcggt cagctgttcc tcctggatca gctgcaactt ggccttcagg tccggctcat
      361 cgtcgctgcg gacggattgg gcaggcttgt catcgagttg cgacgccccg agcgccggaa
      421 aaccgtcatc gaccggttcg gtgcgcatga atctttcgcg ctccgcctcg gacccgggtt
      481 cgggagaggc gggcggatcc gttgcggggt tggagccggt gccgcccgcg accgggcttt
      541 cgctgtggcg cgtcggcatc gcgacctttc tttgcaactc gacccgaaca ttctcgattc
      601 ccttggccgg cgcggccttg gccgcatcgc tgcgcccgtc cgaaccggtc gcggcggtcc
      661 gcagcgattg cgaaggagag gcgtgatagc gccgggcctt aggcggtgta gtcataatat
      721 tgcttcgcct cgtcgaggga ttcgaacatg tagagcctgc cgtcacgcag gatcgcggcc
      781 gaacggcaga atttctcgat cgtcgcgggc tggtgggaaa cgatcacgac ggtcgcgctg
      841 cgcagccttt cgaaaagcac cgacccggcc ttgcggttga attcgacatc ggtcgtctgg
      901 ggcatccctt catcgatcag gtagatgtcg aattccagcg cgagaagcag cgaaaaggtg
      961 aagcgctggc gcatcccggc ggaataggtt cccaccggca tgtcgaaata ttcgtcgata
     1021 tcggtcagcc agcgggtgaa ggcggccacg taatcgggat ccagtccata gatgcgcgca
     1081 atatagcggg cattctcgtt ggccgaatgc ttggtgacga ccccgcccat gaatcccagc
     1141 ggaaacgaga tccgcgaggt tgaccggatc gtgccctcat cgggtttttc cagcccgcac
     1201 atcatgttga ccaacgtcgt cttgccggtg ccgttgggcg ccaggatgcc cagcgaatgc
     1261 cccggctcga cacggaagga ggcacgatcc aggatcacct tgcgctgcgt gccggtccag
     1321 aaggatttcg agacattgtc gaattccagc atggctttgc gtcgcgatcc ttcctgcggt
     1381 ggtgatccgg cccggccgga cctgcccaga ccatatgtct gcgtcgttat gctgtccagt
     1441 tgacgcggtc ggcgttgaga aatcgttaag gcacagggtg ttttcgcgcg gcattttcac
     1501 tagatcggtc ggatgagcga tctttcgcac cggatttccg cctgccgcct ctgcgcgccg
     1561 cgctttgcgg cgaccgcgac gcgccacgcg ccgcgtcccg tgacctggtt cgcgccgggc
     1621 gcgcgaatcc tggtcgtcgg gcaggcaccg gggatgcggg tgcaccaaag cggacgcccc
     1681 ttcaccgatc gttcgggcga caggttgcgc gactggatgg gcgtggacca ggccaccttt
     1741 tatgaccgcg cccggatcgc catcgtgccg atggccttct gttttccggg ttatgacggc
     1801 aagggggccg acctgccgcc gccgccgatc tgcgccgcga cctggcgggc gcaggttctg
     1861 gacctgctgc aacccgatct gacgctgctg gtgggcggtc acgcaatgcg ctggcatctg
     1921 ggcgccggca atgtcacgca aaccgtggcc gcttggcgcg atcacgcgcc ggcgatcttt
     1981 ccgctgccgc atccttcgtg gcgcaatacc ggctggctga agcgcaatcc ctggtttcac
     2041 gccgatctgc tgcccgccct gcgcgaagcg gtggcggcgc ggctggatgc gggttagaaa
//
LOCUS       DTVW01001278            4385 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_556128, whole
            genome shotgun sequence.
ACCESSION   DTVW01001278 DTVW01000000
VERSION     DTVW01001278.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 4385)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4385)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4385
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_556128"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            1..273
                     /locus_tag="EYO87_17040"
                     /pseudo
     CDS             1..273
                     /locus_tag="EYO87_17040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020151702.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1501 domain-containing protein"
     gene            complement(272..754)
                     /locus_tag="EYO87_17045"
                     /pseudo
     CDS             complement(272..754)
                     /locus_tag="EYO87_17045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009803551.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IclR family transcriptional regulator"
     gene            complement(789..1271)
                     /locus_tag="EYO87_17050"
     CDS             complement(789..1271)
                     /locus_tag="EYO87_17050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009504583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl dehydratase"
                     /protein_id="HIC67664.1"
                     /translation="METVGLGFCYEDLPVGRRFRTIGRTVTETDITNFVSVTGMLEVL
                     FINRDFREKESNIPGFAAPGALVYTFMEGLLTQSTMQHTGFAFLDMELKVMGPTFAGD
                     TIHCEVEVTESRRSKSRPNRGLVRTRNKVFKQTGEQVLEYTPLRMIKARMTDKEPGKA
                     "
     gene            1592..2704
                     /locus_tag="EYO87_17055"
     CDS             1592..2704
                     /locus_tag="EYO87_17055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009803553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
                     /protein_id="HIC67665.1"
                     /translation="MNFGFSDEHDAIRDTLARMLSDHATLAVAHDCLEAADGFDSATW
                     TALADGGWLGLAIAEDYGGAAMGAIELAIVAEEIGRSLAAIPFGPVLGLAIPAIQDLG
                     TQSQRENLLPRIAEGRMIVTVALAEDGGSAPERVSAKVLQDRLSGRKSPVSFASDASF
                     AIVAALDEGGTARLYLADLSDPSVSISALDAIDRTRPTSEIVFHDTPVELLPGSDPAA
                     IRTLLDGAAVLAAFEQIGLAERALFLTRDYACERQAFGRQIGSFQAVKHRLADMFAKI
                     ELARSNAFFGAWALASGDERLSEAAAVARLAALDAVQFTTEESVQLHGGIGFTWAADP
                     HLFLRRGWQLKAELGLADLWRERLLCNLADGQRAAN"
     gene            2721..3947
                     /locus_tag="EYO87_17060"
     CDS             2721..3947
                     /locus_tag="EYO87_17060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009803554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
                     /protein_id="HIC67666.1"
                     /translation="MDFSDSPEEAAFRAKARDWLDATATRRNGSEKAQDHFMARDADE
                     VARARDWQARKADAGWAGLTWPRAFGGRDATPIEQVIWNQEEGRYAVPPNVFLIGIGL
                     VGPTVMIHGTEDQKTRFLPRALTGEDIWCQLFSEPAAGSDLAGIRTRARREDDEWVIS
                     GQKVWTSGAHYSTHGILLARTDPQVPKHKGMTMFLVDMSDPAIETRPIRQISGSSSFN
                     EVFIDNLRVPDSARLGGVSEGWKVALTTLMNERFSISVGRASGGARAEELIDLATRVE
                     RNGRPAIEDDEVRARIADFIARQRGLEFTSYRVMTSLSRGQAPGEEGSIGKLLLGKLR
                     QEMGAFGMDLAGTSAGISAKVGDDVARWRNEYLTAPGNRIAGGSDEIQRTIIGERILG
                     LPPEIRVDKDVAFSEL"
     gene            3997..>4385
                     /locus_tag="EYO87_17065"
     CDS             3997..>4385
                     /locus_tag="EYO87_17065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009803555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C4-dicarboxylate ABC transporter
                     substrate-binding protein"
                     /protein_id="HIC67667.1"
                     /translation="MKFKITGIAAACLAMATSAGAQDIDLPDVIAWSAYDTGSAGHAH
                     SIAIGNMMRSKYGSTVRVLPGRNDVSRMTPLKNGTVDYCLCGIASYFAAEGVFLFAAP
                     EWGPQPIRAVLQAVGDYGLGVAVAADAG"
BASE COUNT          863 a         1311 c         1342 g          869 t
ORIGIN      
        1 acgggcctcg gcctgggagc ggcggcactg ggcgtgctca gctcgcagga gcgtcacgtc
       61 acagcggcct cccaaacgcc accgcagcgg aagggattgc cccatcttgt tccgcgggcc
      121 aaacgggtga tttttctctg tatggcgggc ggaccttcgc acttggaaac atttgattac
      181 aagcccgaac tggagcgctt ggatggaaaa ccgatgccca cttcgtttac ccagggccaa
      241 cccattgcgc aactgcaagg ccaggagttg aagtgtcaaa ggccagcatg accagccccg
      301 atgccgaaca gaacaatggc cggttgatcc cctgttgggc gacataccga acgggctggg
      361 ggctttcgat gaccgacgaa taaatgactt tctcgccgtc ccggacagca aacaggatgg
      421 tttcaccggt ctggttaacc acatcattca tcaccccgcg caggaccgat tcgaacgggt
      481 ggttggtcag aattgactgg gcgaactgaa aaatcctcgg acccagaaag taattgtctt
      541 cctcgcgcat cagatacccc ttctcggtga ggggccgaag cagcaccagc aaactgctct
      601 tggggcaatc aatcgcgatg ctgagttccg aaagagacat gtgacgtttg cagcgcgcca
      661 aaagatcgaa caacgcaagg atacgcgtca aggaccgggg cccttccgat gtgcgcccgg
      721 cggcttcggc tgggccagat tgcgcggttt tcatagtcat gtctccagtg ccgctatccg
      781 gaacaggcct atgcctttcc tggctcttta tccgtcatgc gggccttgat catccgcaac
      841 ggcgtatact ccaatacctg ttctccggtt tgcttgaaca ccttgtttcg cgtccgcacc
      901 aatccgcggt tcggacggct cttcgaccgg cgcgattctg ttacctcgac ctcacaatgg
      961 atggtgtccc cggcaaatgt gggccccatg accttcagtt ccatgtccag aaaggcaaag
     1021 ccggtatgtt gcattgtgga ttgggtcaag agcccttcca taaaggtata gaccagcgca
     1081 ccgggcgcgg cgaaaccggg gatattggat tccttctctc ggaagtcacg attgatgaac
     1141 aagacctcaa gcatgccggt aacacttaca aaattcgtga tatcggtttc ggtgacggtg
     1201 cggccaatgg tccgaaacct gcgccccact ggcaaatctt cataacaaaa cccgagtcct
     1261 acagtttcca tttcgcacaa ttcccttgat cagttccatt ttctgagagg gttcggccac
     1321 atctgtcctg cgcccggaac acgccccggt tccttcacgt taggcggcaa gctccgcagc
     1381 aatcaatcga ctgcctcgtt tttgcggctt tcacgtcgat tgagcacatt cttgatgaat
     1441 cgcattcttc gctccagtgg cccctttttc cacgccacag cacatatgtg gttttacgcg
     1501 gctggtgccg gatagcgttt gggacatacc gaacgcgtac cttacctttt tgtgaacagg
     1561 cgccaaatgc catgacccga agaggaccag catgaatttc ggcttttccg acgaacacga
     1621 tgccatacgc gacacgctgg cacgaatgct gagcgatcac gccactctcg cggtggcgca
     1681 tgactgtctt gaggctgccg acgggttcga ttccgcaacc tggaccgcct tggcggacgg
     1741 cggatggctg ggccttgcaa ttgccgaaga ctacgggggg gcggcgatgg gggcgatcga
     1801 actggccatt gtcgccgaag agatcggccg tagcctggcc gccatacctt ttggcccggt
     1861 tcttggcctg gcgatccccg cgattcagga cttgggcacg caaagccaaa gggaaaatct
     1921 gcttccccgg atcgccgaag gccgcatgat cgttaccgtc gcgcttgccg aggatggagg
     1981 gtctgcaccg gaacgggtct cggcaaaagt gctgcaggat cgcctttcgg gacggaaatc
     2041 gccagtttcg ttcgcatccg atgcgtcatt cgcgatcgtc gccgccctgg acgaaggcgg
     2101 caccgcgcgc ctttatctgg cggatctttc ggacccctcg gtgtcgatca gcgcgctgga
     2161 tgcgatcgac cgcacccgtc cgacgtccga gatcgtcttt cacgacacgc cggttgaact
     2221 gcttcccggg tccgatcccg cagcgatccg gactcttctg gacggcgccg cagtgttggc
     2281 cgccttcgaa cagatcggcc tggccgagcg ggcgcttttc ctgaccagag actatgcctg
     2341 cgagcggcag gcgttcggac gccagatcgg cagttttcag gcggtcaagc accggctcgc
     2401 ggacatgttc gccaagatcg agctggcacg gtccaatgct tttttcggcg cctgggcgct
     2461 ggcgagcggg gatgaacggc tgtccgaagc ggcggcggta gcacgcctcg cggctctcga
     2521 tgcagtgcaa ttcaccactg aggaatcggt gcagcttcac ggtgggatcg ggttcacctg
     2581 ggcggccgac ccgcatttgt ttctgcggcg aggatggcag ttgaaggccg aactcggcct
     2641 ggccgatttg tggcgcgagc ggctgctttg caatctggcg gacggccaaa gggccgcgaa
     2701 ctgacaagga caaagtgcag atggatttca gcgacagccc ggaagaagcc gcgttccgcg
     2761 ccaaggcgcg cgactggctt gatgccaccg cgacccgccg caatggaagc gaaaaggccc
     2821 aggaccattt catggcccgc gacgccgacg aagttgcccg tgcgcgcgac tggcaggcac
     2881 gaaaggccga cgcaggctgg gcggggctga catggccccg tgctttcggt gggcgtgacg
     2941 ccactccgat cgagcaagtg atctggaatc aagaggaagg gcgctacgcc gtcccgccca
     3001 acgtctttct gatcgggatc gggctggtcg ggcctacggt catgatccac ggcaccgaag
     3061 accagaaaac aagattcctg ccccgggctc tcacgggcga agacatctgg tgccaacttt
     3121 tttccgaacc cgccgccggg tccgatttgg ccggtatccg cacccgtgca cgccgcgaag
     3181 acgacgaatg ggtgatctcc ggtcagaagg tttggacctc gggggcgcat tattccactc
     3241 acggcatcct gctggcgcgc accgatccac aggtgcccaa gcacaaggga atgaccatgt
     3301 tccttgtgga catgtccgac ccggccatcg aaacccgtcc tattcgccag atttcgggca
     3361 gctccagttt caacgaagtg ttcatcgaca acctgcgcgt gccagacagc gcccgcttgg
     3421 gcggtgtatc cgaagggtgg aaagtggcgc tgaccacact catgaacgaa cggttcagta
     3481 tttccgtcgg ccgggccagt ggcggtgcgc gggccgagga attgattgat ctggctaccc
     3541 gtgtcgaacg gaacggtcgc ccggccatcg aggacgacga ggtgcgcgcg cgcattgccg
     3601 atttcatcgc gcgtcaacgc ggactggaat tcacctctta ccgggtcatg acgtcgcttt
     3661 cgcgcggcca ggcaccgggt gaagagggct cgatcggcaa gctgttgctg ggcaagctgc
     3721 ggcaggaaat gggcgctttc gggatggatc tggcgggaac ttcggcgggc atatcagcca
     3781 aggtcgggga tgacgtggcg cgctggcgaa acgaatacct gaccgcgccg ggcaaccgga
     3841 tcgcgggggg atcggacgag atccagcgca cgatcattgg cgaacgcatt ctcgggctgc
     3901 cgcctgaaat acgcgtcgac aaggatgtcg cgttttcaga gctttgatct gaatgggcgc
     3961 cacccgggac caacgaccaa caaggaggag aatatcatga agttcaagat aaccgggatc
     4021 gctgccgcat gcctggcaat ggccacctcg gctggcgcgc aagacatcga tctgcctgac
     4081 gtgatcgctt ggtcggccta tgacacggga tcggccggtc atgcgcattc catagccatc
     4141 ggcaacatga tgcgcagcaa atacggatcg acggtccgcg tgcttccggg gcgaaacgac
     4201 gtctcgcgga tgacgccgct caaaaacggg acggtcgatt attgcctgtg cggtatcgcc
     4261 tcctatttcg ctgccgaagg ggttttcctt tttgctgcgc ctgaatgggg cccgcagccg
     4321 atccgcgcgg tgcttcaggc tgtcggcgac tacggtctgg gtgtcgccgt cgcggccgat
     4381 gccgg
//
LOCUS       DTVW01001279            1724 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_576903, whole
            genome shotgun sequence.
ACCESSION   DTVW01001279 DTVW01000000
VERSION     DTVW01001279.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1724)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1724)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1724
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_576903"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..728)
                     /locus_tag="EYO87_17070"
     CDS             complement(<1..728)
                     /locus_tag="EYO87_17070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011746932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-
                     alanine ligase"
                     /protein_id="HIC67668.1"
                     /translation="MSLWNAQDAAAATGGRAQGNWTASGVSIDTRNMAPGDLFIALKD
                     TRDGHEFVQRALQQGAAAAMVSRIPEGVAAGAPLLVVPDVLRGLGDLGRAGRARMVGK
                     VVAITGSVGKTSTKEMARAALSGQGRIHAAEASYNNHWGVPLTLARMPPTTDFAILEI
                     GMNHPGEIAPLSRLARPHVALITTVAAAHLEAFGAIEGIAREKGAIFEGLQNAGTAII
                     PEDLEVTPILRACADAAGAIVVGFG"
     gene            complement(725..>1724)
                     /locus_tag="EYO87_17075"
     CDS             complement(725..>1724)
                     /locus_tag="EYO87_17075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011746931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
                     6-diaminopimelate ligase"
                     /protein_id="HIC67669.1"
                     /translation="LHRILSEAAQAGVSHAAMEASSHGLDQRRLDGVRIEAGAFTNFS
                     QDHLDYHASFDDYFAAKALLFNHILEEGEAAVVNVDSQRGRQMAEIATDRGLALTSIG
                     TGEDAMLRILGQRFDATGQDLRFSVMGQPQMVRLPLIGGFQAENVLAAMALAMASGDA
                     AGDIMRVLPDLRTVRGRMQLVAQRENGAAVFVDYAHKPGAVIAALQSLRPHVMGRIVV
                     VIGAGGDRDRAKRPLMGEAARDHADVVIVTDDNPRTEDPAAIRHAILQGAGPEATEVA
                     DRAEAILRGVDALQPGDALLIAGKGHETGQIVGQDVYPFDDAEQASVAVAALDGRI"
BASE COUNT          276 a          620 c          550 g          278 t
ORIGIN      
        1 ccgaagccca cgacgatcgc gcccgccgca tccgcgcagg cgcgcaggat tggcgtcacc
       61 tccagatcct cggggatgat cgcggttccc gcattctgca atccctcgaa gatcgcgccc
      121 ttctcgcggg cgatcccctc gatcgcgccg aaggcctcca gatgcgccgc cgcgacggtg
      181 gtgatcagcg ccacatgcgg acgggccagt cgcgacagcg gcgcgatctc gccgggatgg
      241 ttcatgccga tctcgaggat ggcgaaatcc gtggtgggag gcatccgtgc cagcgtcagc
      301 ggcacccccc agtggttgtt gtagctggcc tcggccgcgt ggatgcgccc ctgcccgctc
      361 agggctgccc gcgccatctc cttggtcgag gtcttgccga ccgagccggt gatcgcaacc
      421 accttgccga ccatccgcgc ccggccggcc cggcccagat ccccgaggcc gcgcagaacg
      481 tcgggcacga ccagcagcgg cgccccggcg gcgacgcctt cgggaatacg gctgaccatg
      541 gcggctgccg caccctgttg cagcgcgcgc tgcacgaatt catggccgtc gcgcgtatcc
      601 ttcagcgcga tgaacagatc cccgggcgcc atattgcgcg tgtcgatgga cacgcccgaa
      661 gcagtccaat tcccctgcgc tcgccctccg gtggcggcgg cggcgtcctg cgcgttccaa
      721 aggctcatat gcggccatcc agcgcggcga ccgcgaccga ggcctgttcg gcatcgtcga
      781 acggatagac atcctgcccg acgatctggc cggtctcgtg tcccttgccc gcgatcagca
      841 aggcatcgcc cggttgcaag gcatcgacgc cgcgcaggat cgcctcggcc cggtcggcga
      901 cctcggtcgc ctcggggccc gcaccctgca ggatggcatg gcggatggcg gcgggatcct
      961 cggtccgcgg attgtcatcc gtcacgatga ccacgtcggc atggtctcgg gcagcctcac
     1021 ccatcagtgg gcgcttggcg cggtcgcggt cgccgccggc gccgatgaca acaacgatcc
     1081 ggcccatcac atgcgggcgc agcgattgca gggccgcgat caccgcgccg ggcttgtggg
     1141 cgtaatcgac aaagaccgcg gcaccgttct cgcgctgcgc cacgagttgc attcgaccgc
     1201 gtacggtgcg cagatcgggc agaacgcgca tgatatcccc ggccgcatcg cccgaggcca
     1261 tggccagcgc catcgccgcc aacacgtttt ccgcctgaaa accgccgatc agcggcaggc
     1321 gcaccatctg cggctgcccc atgaccgaaa agcgcagatc ctgcccggtc gcgtcaaaac
     1381 gctgccccag aattcgcagc atcgcgtcct cgcccgtgcc gatgctggtc agggccaggc
     1441 cacgatccgt tgcgatttcg gccatctggc ggccgcgctg gctatcgaca ttgacgacag
     1501 cagcttcgcc ttcttccaga atatgattga acagcaatgc cttggcggcg aaatagtcgt
     1561 caaagctggc atggtaatcc agatgatcct ggctgaaatt ggtgaatgcg cccgcctcga
     1621 ttcgcacacc gtccagacgc cgctggtcca gtccgtggct ggatgcctcc atcgccgcat
     1681 ggctcacgcc ggcctgggcg gcctcggaca ggatgcggtg cagg
//
LOCUS       DTVW01001280            1107 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_582605, whole
            genome shotgun sequence.
ACCESSION   DTVW01001280 DTVW01000000
VERSION     DTVW01001280.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1107)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1107)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1107
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_582605"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..281)
                     /locus_tag="EYO87_17080"
     CDS             complement(<1..281)
                     /locus_tag="EYO87_17080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007426672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HIC67670.1"
                     /translation="MEAITTAALLELAAVAVGAGIGGGILAGLLGVGGGIVIVPALYF
                     ALNLTGMDPGLTMKVAVGTSLATIVFTSLASGLGHHRKGAIDTALLKLWA"
     gene            complement(286..1035)
                     /locus_tag="EYO87_17085"
     CDS             complement(286..1035)
                     /locus_tag="EYO87_17085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012759399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1028 domain-containing protein"
                     /protein_id="HIC67671.1"
                     /translation="MTWSLIARDPASGALGIAVASRFFACGSLVPHVGPAAAFATQAF
                     VNPVWGTEGLRRLGAGEAADALLADLVARDAGAAQRQAHALDARGGGAAHTGAECVPW
                     AGHVTGQGLSVAGNMLEGPQVIEDTARVFADRADLDFPDRMLAAMQAGEDAGGDRRGR
                     QAAGLRIHRGQAHPWLDLRADDHADPLAELRRLLAVARERYLMVAEIMPTAENFSGAP
                     DRSDTDRRIAEAERARIATGRASASFATTKG"
BASE COUNT          169 a          415 c          379 g          144 t
ORIGIN      
        1 gcccatagtt tcagcagcgc ggtgtcgatg gcgcccttgc ggtgatgacc cagacccgag
       61 gccagcgagg tgaacacgat ggtcgccagc gaggtgccga ccgcgacctt catcgtcagg
      121 ccgggatcca tgccggtcag gttcagcgcg aaatagagcg cgggaacgat gacgatcccg
      181 ccgccgaccc ccagcaagcc ggcaagaatg ccgccgccga tgcccgcgcc cacggcgacg
      241 gcggccagtt ccagcagcgc ggctgtggtg attgcctcca tctcgctagc ctttcgtcgt
      301 cgcgaacgag gcgctggcgc ggccggtcgc gatccgcgcc cgttccgcct ctgcgatgcg
      361 gcggtcggta tcgctgcgat ccggggcgcc gctgaaattt tccgcggtcg gcatgatctc
      421 ggcgaccatc agatagcgtt cgcgcgccac cgccagcaat cggcgcagtt cggccagcgg
      481 atcggcatga tcatcggccc gcagatccag ccagggatgg gcctgaccgc gatggatgcg
      541 cagcccggcc gcctgccgcc cgcgacggtc gccgcccgca tcctcgcccg cctgcatcgc
      601 ggccagcatc cggtcgggaa agtccaggtc ggcgcggtct gcgaagacgc gcgccgtgtc
      661 ctcgatcacc tgcggcccct ccagcatgtt gcccgcgacc gaaaggccct gacccgtcac
      721 atgtcccgcc cagggcacgc attccgcgcc ggtatgggcc gcgccgccgc cccgcgcatc
      781 cagcgcatgg gcctgccgct gcgccgcccc cgcatcgcgc gcaaccagat cggccaggag
      841 ggcatcggcc gcctcgcccg cgcccaggcg gcgcagcccc tcggtgcccc agaccgggtt
      901 gacgaaggcc tgcgtggcga aggcggctgc cggaccgaca tgcggcacca gcgatccgca
      961 ggcgaaaaag cgactggcga cggcgatacc aagcgcgccg gacgcgggat cgcgggcgat
     1021 cagggaccag gtcatcagcg gcccaccgca taggcctgca tcagccgggg cgtggcggcg
     1081 gcggtcagca tcccgtcggg ttcgcgc
//
LOCUS       DTVW01001281            2093 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_583496, whole
            genome shotgun sequence.
ACCESSION   DTVW01001281 DTVW01000000
VERSION     DTVW01001281.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2093)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2093)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2093
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_583496"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>2093)
                     /locus_tag="EYO87_17090"
     CDS             complement(<1..>2093)
                     /locus_tag="EYO87_17090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006940036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HIC67672.1"
                     /translation="IVLDDLNRALKPHGLWFPVDVSTASRATIGGMAANNSCGGRSLR
                     YGTMRDNVISIEAIMADGTLAQFGPVGPRGGPSDALVDPLLAMGRDHAALIEARIPKL
                     TRRVGGYNIDALVPKNRPVNLSHLLVGSEGTLAYFTRIELKLWPLVGQRVLGVCHFPS
                     FYQAMDATQHLVALNLLSVELVDNTMIGLSRQIPMFRPTIEQFVKGDPAALLLVEFDE
                     GDAAANAEKLRLLDERMADLGFDWRAEGKGWGGVVPIADQRLQGQIAEVRKSGLNIMM
                     SMKQEGKPVSFVEDCAVELPDLAEYTRELSAVFERHGTRGTWYAHASVGCLHVRPVLN
                     LKLDADVKRMRAIAEEAFALVSKYKGSHSGEHGDGIVRSEFHERMFGTEITTLFREVK
                     DRFDPDRRFNPGKIVDAPKMDDRRLFRFAPGYTVAPLKTEFDWSAWPGAGGGFQGAVE
                     MCNNNGACRKLAGGTMCPSYRVTRHERDVTRGRANTLRLAISGQLGPDALTSDAMADT
                     LALCVSCKGCKRECPTGVDMARMKIEVLAARARSNGLTLHDRLVAYLPRYAPVAARLH
                     WLMNLRNRLPLLARLMQRPTGFSAARALPHWSARPFRDAEAQGADADIVLFADPFNRW
                     FEPENLRAAVRVLNAAGRRVTVARPLDGGPPLQCGRTLLSAGLVDEARTEARRLIDAL
                     LPHIRAGRSIVGLEP"
BASE COUNT          355 a          722 c          682 g          334 t
ORIGIN      
        1 acggctccag cccgacgatg ctgcgcccgg cacggatatg gggcaacagc gcgtcgatca
       61 gtcggcgggc ctcggtccgg gcctcgtcga ccagtccggc cgacagcagc gtgcggccac
      121 attgcagcgg cggtccgcca tccagcggcc gggccaccgt cacgcgcctg ccggccgcgt
      181 tcagaacccg gaccgcggca cgcaggttct cgggctcgaa ccagcgattg aacggatcgg
      241 cgaacagcac gatatcggca tccgcccctt gcgcctcggc atcgcggaag gggcgagcgg
      301 accagtgggg cagggcgcgc gcggcggaaa agccggtcgg ccgctgcatc agccgcgcca
      361 gcagcggcag gcggttgcgc aggttcatca gccagtgcag ccgcgcggcc accggcgcat
      421 agcgcggcag ataggccacc agccggtcat gcagcgtcag accgttgctg cgggcgcggg
      481 cggcgagaac ctcgatcttc atgcgggcca tgtccacgcc ggtcgggcat tcgcgcttgc
      541 agcccttgca ggacacgcac agggccagcg tatcggccat cgcgtccgat gtcagcgcat
      601 cggggccaag ctggcccgag atcgccagcc gcagcgtgtt ggcccgaccg cgagtcacgt
      661 cgcgttcgtg acgggtgacg cgataggacg gacacatcgt cccgcccgcc agcttgcggc
      721 aggcgccgtt gttgttgcac atctcgaccg cgccctgaaa cccgccgccg gcgccgggcc
      781 atgccgacca gtcgaattcg gtcttcagcg gcgccaccgt atagccgggc gcaaagcgga
      841 acaggcggcg gtcatccatc ttcggcgcat cgacgatctt gccgggattg aagcggcgat
      901 ccgggtcgaa ccggtccttg acctcgcgga acagcgtggt gatttcggtc ccgaacatgc
      961 gctcgtgaaa ttccgaccgc acgatcccgt cgccatgttc gcccgaatgc gaccccttgt
     1021 atttcgatac cagcgcaaag gcttcctcgg cgatcgcgcg catccgtttg acatcggcgt
     1081 ccagtttcag gttcagcacc ggccgcacat gcaggcagcc gaccgaggca tgggcatacc
     1141 acgttcccct ggtgccgtgg cgttcgaaga ccgcgctcag ctcgcgcgtg tattccgcca
     1201 gatcgggcag ttcgacggcg caatcctcga cgaaggagac gggctttccc tcttgcttca
     1261 tcgacatcat gatgttcagc ccggatttgc ggacctcggc gatctggccc tgaaggcgct
     1321 ggtcggcgat cgggaccacg ccgccccagc ccttgccctc ggcgcgccag tcaaagccca
     1381 gatcggccat gcgttcgtcc agcagccgca gcttttcggc attggcggcg gcgtcgcctt
     1441 cgtcgaattc gaccagcagc agggcggcgg gatcgccctt gacgaattgc tcgatggtgg
     1501 gacggaacat cgggatctgc cgtgacaggc cgatcatcgt gttgtccacc aactcgaccg
     1561 atagcaggtt cagcgcaacc agatgctggg tggcgtccat cgcctgatag aagctgggga
     1621 aatggcacac gcccagcacg cgctggccaa ccagcggcca caacttcagt tcgatccggg
     1681 tgaaataggc cagcgtgccc tcgctgccga ccagcaggtg ggacaggttg acgggtcggt
     1741 tcttgggcac cagtgcatcg atgttgtagc cgccgacccg ccgggtcagt ttcggaatcc
     1801 gcgcctcgat cagcgccgca tggtcgcgac ccatcgccag aagcggatcc accagcgcgt
     1861 cggacggccc gcccctcggc ccgaccggcc cgaactgcgc cagggtgccg tcggccatga
     1921 tcgcctcgat cgagatcacg ttgtcgcgca tcgtgccgta tcgcagcgac cgcccgccgc
     1981 aggaattgtt ggccgccatc ccgccgatcg tggcgcgcga tgcggtcgag acatcgaccg
     2041 gaaaccacag cccatgaggt ttcagcgccc ggttcagatc gtccagaacg atg
//
LOCUS       DTVW01001282            2605 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_592898, whole
            genome shotgun sequence.
ACCESSION   DTVW01001282 DTVW01000000
VERSION     DTVW01001282.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2605)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2605)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2605
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_592898"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..476)
                     /locus_tag="EYO87_17095"
     CDS             complement(<1..476)
                     /locus_tag="EYO87_17095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67673.1"
                     /translation="MTAHPIASGRPAASRRPGPAILALAMLLALITGAAPVAAAPAEP
                     LLIESQASPDGTRLGLSWSAQDGAMPQVFRRRLGETGIESWAPYKPQIALPQRILDSG
                     LEPGQAYEYQIRIETGRKTLIGFWAYGTKVPVQPQSGRAIVVVDETVEAGLADRLDR"
     gene            665..1498
                     /gene="fghA"
                     /locus_tag="EYO87_17100"
     CDS             665..1498
                     /gene="fghA"
                     /locus_tag="EYO87_17100"
                     /EC_number="3.1.2.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018633495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-formylglutathione hydrolase"
                     /protein_id="HIC67674.1"
                     /translation="MSLETVAENRSFGGTQGVYRHSSAATGTDMTFGLFLPEAAQFGR
                     VPVLWYLSGLTCTHENAMTKAAAQQWCDEAGIAICFPDTSPRGEDVADDEAFDLGKGA
                     GFYVNATQDPWKPHFRMWHYVVEELPDLLGDNFAIDREAMGITGHSMGGHGALTIAMT
                     HPDRYGSVSAFAPIAHPSNSDWGRKQFSAYLGDDEAAWRAHDSTVLMTEKGYPGEVLI
                     DQGSSDQFLDLLKPEALAQAMIARRQPGWFRMQPGYDHSYFFVQTFMADHVMWHADRL
                     G"
     gene            1671..>2605
                     /locus_tag="EYO87_17105"
     CDS             1671..>2605
                     /locus_tag="EYO87_17105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent dehydrogenase, methanol/ethanol
                     family"
                     /protein_id="HIC67675.1"
                     /translation="MRHLLNRAAAALLLTATAAFANEDLTSRIDDSKQWAIQTGDYAN
                     TRYSELDQITKDNVGDMRVAWTFSTGVLRGHEGGPLVVDDIMYVHTPFPNNVFALDLK
                     NDGKILWRYEPQQDPEVIAVMCCDTVNRGVAYADGTILLHQADTTLVALDSKTGKEKW
                     KVKTGDPASGETNTATVLPVKDKVIVGVSGGEYGVRGRVTAYNLSDGSEVWKAYSTGP
                     DDEMLVDPEKTMELGKPIGKDSSLNSWEGDQWKIGGGSTWGWYSYDPELNLIYYGTGN
                     PSTWNPAQRPGDNKWSMTIMARDADTGMAKWFYQMT"
BASE COUNT          476 a          825 c          862 g          442 t
ORIGIN      
        1 cggtccagcc ggtcggccag cccggcttcg accgtctcgt cgacgacgac gatcgcgcgc
       61 cccgattgcg gctgaaccgg aactttggtg ccgtaggccc agaacccgat cagcgtcttg
      121 cggccggtct cgatcctgat ctgatattca taggcctgtc cgggttccag gccgctgtcc
      181 aggatccgtt gcggcagtgc gatttggggc ttgtagggcg cccagctttc gatgccggtc
      241 tcgcccagcc ggcggcgaaa gacctgcggc atggcgccat cctgcgccga ccatgacagg
      301 cccagccttg tgccgtcggg cgaagcctgc gattcgatca gcagcggctc ggccggggca
      361 gccgcgaccg gcgcggcgcc ggtgatcagc gccagcagca tcgccagcgc aagaatggcc
      421 ggcccggggc gtcggctggc ggctggtcgt ccggaagcga tcggatgcgc ggtcatcggg
      481 gcagaatagg tggtgttggc atcccgccgc aaggtcgtcg ccggcttgcg cggcgcgcca
      541 cccgcgccct tcgtggcaat ccgcgccgtt tcgcattgtc ggcacgccgg attccggtct
      601 tgatgggccg gcgcggccgt cccgctgcaa gcgggcggcc atcccgaaca tcacggagga
      661 tcggatgagc cttgaaacgg tagcagaaaa ccgcagcttc ggtgggacgc agggggtcta
      721 caggcacagt tcggcagcca ccgggaccga catgaccttc ggccttttcc tgcccgaggc
      781 ggcgcagttc ggacgggttc cggtgctgtg gtatctttcg ggcctgacct gcacccacga
      841 aaacgcgatg accaaggccg ccgcgcagca atggtgcgac gaggccggca tcgccatctg
      901 ttttcccgac acctcgccgc gcggcgagga tgtggccgat gacgaggcct tcgatctggg
      961 caagggcgcg ggcttttacg tgaacgccac ccaggatccg tggaagccgc atttccggat
     1021 gtggcactac gtcgtggagg aactgcccga cttgcttggc gacaatttcg ccatcgaccg
     1081 cgaggcgatg gggatcaccg ggcattcgat gggcggccac ggcgccctga ccatcgcgat
     1141 gacgcatccg gaccgctacg gctcggtctc ggccttcgcg cccatcgccc atcccagcaa
     1201 ctcggattgg ggccggaagc agttctcggc ctatctgggc gatgacgagg cggcttggcg
     1261 tgcccacgat tcgaccgttc tgatgaccga gaagggctat cccggcgagg ttctgatcga
     1321 tcagggcagc agcgaccagt ttctggatct gctgaagccc gaggccctgg cccaggccat
     1381 gatcgcacgt cgccagccgg gctggttccg gatgcagccg ggctatgatc acagctattt
     1441 cttcgtgcag accttcatgg ccgatcacgt catgtggcac gccgatcggc tgggctgatc
     1501 gccttgccga acattcccga acgccatgcc gctttgccat cagactttag gggcaagcgg
     1561 catggcggca gattgacgca aggtcggctg catccaagac tgtcttctat ggacggctgc
     1621 ggggggagga cagttccgcg gcccttgatc caagagcgga ggaacaatcg atgagacact
     1681 tgctgaaccg cgcggccgcg gccctgctgc tgacggccac cgcggcgttc gccaacgaag
     1741 acctgaccag ccggatcgac gattccaagc aatgggcgat ccagaccggc gattacgcca
     1801 atacgcgcta ttccgagttg gaccagatca ccaaggacaa tgtcggcgac atgcgcgtcg
     1861 cctggacctt ctcgaccggt gtcctgcgcg ggcacgaggg cggaccgctg gtggtggacg
     1921 acatcatgta tgtccacacg ccgttcccga acaacgtctt cgccctggac ctgaagaatg
     1981 acggcaagat cctctggcgc tacgaaccgc agcaggatcc cgaggtgatc gcggtgatgt
     2041 gctgcgatac cgtgaaccgc ggcgtggcct atgccgacgg caccatcctg ctgcatcagg
     2101 ccgacaccac gctggtggcc ctggattcaa agaccggcaa agagaagtgg aaggtcaaga
     2161 ccggcgatcc ggccagcggc gagaccaaca ccgccaccgt cctgccggtc aaggacaagg
     2221 tgatcgtcgg cgtctcgggc ggtgaatacg gcgttcgcgg ccgggtgacg gcctataacc
     2281 tgtcggatgg ttcggaagtc tggaaagcct attcgaccgg accggacgac gagatgctgg
     2341 tcgatcccga aaagaccatg gaactgggca agccgatcgg caaggacagc agcctgaaca
     2401 gctgggaagg cgatcagtgg aagatcggcg gcggctcgac ctggggctgg tattcctatg
     2461 atccggagct gaacctgatc tattacggca ccggcaaccc ctcgacatgg aaccccgcgc
     2521 agcgcccggg cgacaacaag tggtcgatga cgatcatggc ccgcgatgcc gataccggta
     2581 tggccaagtg gttctaccag atgac
//
LOCUS       DTVW01001283            1343 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_596639, whole
            genome shotgun sequence.
ACCESSION   DTVW01001283 DTVW01000000
VERSION     DTVW01001283.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1343)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1343)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1343
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_596639"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(41..1177)
                     /gene="dapE"
                     /locus_tag="EYO87_17110"
     CDS             complement(41..1177)
                     /gene="dapE"
                     /locus_tag="EYO87_17110"
                     /EC_number="3.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005980365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinyl-diaminopimelate desuccinylase"
                     /protein_id="HIC67676.1"
                     /translation="MIDAADLTARLIRCPSVTPEEGGALVLLGDMLHQAGFETHRIDR
                     GGTPNLFARWGAKGRPALGFNGHTDVVPPGDLGSWTHPPFSGHVEDGLIWGRGATDMK
                     SGVAAFTAAAIDFVTETPPDGAVILTITGDEEGPSTHGTSAIIDWMEENGERMQACIV
                     GEPSNPDAMGEMMKIGRRGSATYRIRATGLQGHAAYPHRARNPLHTLTRYLNDLIAAP
                     LDSGSDHFEPSGLQIVSVDCGNPASNVIPERASAVVNIRFNDLHTAASLAEELTRRAA
                     VLGDETGVVLNIDADVSGEAFVTEPGPFVDLVRDVVEQQTGRRPILSTSGGTSDARFI
                     KDLCPVVEFGLVGHFMHQVDERVPQAQVRQLKMIYQRILERFFA"
BASE COUNT          239 a          437 c          443 g          224 t
ORIGIN      
        1 agggcgcggc agcggtccag atcgcgcgtc tcctcgatct tcatgcgaaa aatctttcca
       61 gaatgcgttg gtagatcatc ttcaactgac ggacctgcgc ctgaggcacg cgctcgtcga
      121 cctggtgcat gaaatggccg accagtccga attccacgac cgggcaaaga tccttgatga
      181 accgtgcgtc cgaggttcca cccgaggtgg acaggatcgg ccggcgtccc gtctgctgtt
      241 cgaccacgtc gcggaccaga tcgacgaagg ggccgggttc ggtcacgaat gcctcgcccg
      301 aaacgtcggc atcgatgttc aggacgacgc cggtttcgtc gcccagcacc gcggcgcgcc
      361 gggtcagctc ctcggccagc gaggcagcgg tatgcaggtc gttgaagcgg atattgacca
      421 cggccgaggc acgttcgggg atcacgttcg aggccgggtt gccgcaatcc accgacacga
      481 tctgaagacc gctcggctcg aaatggtcgg accccgaatc cagcggtgcg gcgatcagat
      541 cgttcagata gcgggtcagc gtgtgaagcg gattcctggc ccgatgcgga taggcggcat
      601 ggccctgcaa ccccgtggcg cggattcggt aggtggccga tccgcgccgg ccgatcttca
      661 tcatctcgcc catcgcatcg gggttcgatg gctcaccgac gatgcaggcc tgcattcgtt
      721 cgccgttttc ttccatccag tcgatgatcg cactggtgcc gtgtgtcgac gggccctcct
      781 cgtcgccggt gatggtcagg atcaccgcgc cgtcgggggg tgtttcggtg acgaaatcga
      841 tggcggccgc ggtaaaggcc gcgacgcccg atttcatgtc ggtcgcaccg cgcccccaga
      901 tcaggccgtc ctcgacatgg ccgctgaagg gcggatgggt ccaggatcca agatctccgg
      961 gcggcacgac atcggtgtgg ccgttgaacc ccagagccgg ccggcctttt gcgccccagc
     1021 gggcgaacag gttcggcgtg cccccgcgat cgatgcggtg ggtctcgaaa cccgcctggt
     1081 gcagcatgtc ccccagcagg accaaggcgc cgccctcttc cggcgtgacc gaagggcagc
     1141 ggatcaggcg ggcggtcagg tcggcggcgt caatcatctc atatcccggt ctcgaaggcg
     1201 cggcggacca ggttcagccc ggtcacgacc agcagcacca gcgtccagcg ccgaaactgc
     1261 accacatcaa gccggtcctg caaggcgaag ccggccagca ttccggcaaa ggcgggaagc
     1321 accagcagga ccgacagcgg cag
//
LOCUS       DTVW01001284            1242 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_598069, whole
            genome shotgun sequence.
ACCESSION   DTVW01001284 DTVW01000000
VERSION     DTVW01001284.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1242)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1242)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1242
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_598069"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1242)
                     /locus_tag="EYO87_17115"
     CDS             complement(<1..>1242)
                     /locus_tag="EYO87_17115"
                     /EC_number="2.4.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HIC67677.1"
                     /translation="VRDNFTKTDVMATLPGPLAIGHVRYSTAGTKANTAIRDVQPFFG
                     EFSMGGCAIAHNGNITNAAALRRELTERGSIFQSSSDSECIIHLMARSIQRNIPERMK
                     DALRRVEGAFSVIAMTRTKLIGVRDPLGVRPLVLGKVGDDGFCLASETCALDIIGADF
                     VREIEPGEMVVITKGKVESSRPFGPSTGRFCIFEHVYFSRPDSIIGGRSVYETRRQIG
                     VELAREAPIEADLVCPVPDSGTPAAIGFAQESGIPYGMGIIRNQYMGRTFIEPTEQIR
                     NMGVRLKLNVNRSLIAGKRVVLVDDSVVRGTTSRKIKDMIIDAGAAEVHFRIASPPTA
                     WPCFYGVDTPERDKLLAAQMSPEEMRDWIGVDSLAFVSLDGLYRAVGEAGGRNTKSPQ
                     YCDACFSGDYPVAPFDQLERG"
BASE COUNT          210 a          401 c          410 g          221 t
ORIGIN      
        1 aagccgcgtt cgagctggtc gaagggcgcg accgggtaat cgcccgagaa acaggcatcg
       61 caatattgcg ggctcttggt gttgcggcct cccgcctcgc cgaccgcgcg gtagagcccg
      121 tccagcgata cgaaggccag gctgtcgacg ccgatccagt cgcgcatttc ctcggggctc
      181 atctgggccg ccagcagctt gtcccgctcg ggcgtgtcca cgccgtagaa gcacggccag
      241 gcggtcggag gcgaggcgat gcggaaatgc acctcggcgg cgcccgcgtc gatgatcatg
      301 tccttgatct tgcggctggt cgtgccgcgc accacgctgt cgtcaaccag aaccacccgc
      361 ttgcccgcga tcagcgatcg gttgacgttc agcttcaggc gcacgcccat gttgcggatc
      421 tgttcggtcg gctcgatgaa ggtccggccc atatactggt tgcggatgat tcccatgcca
      481 taggggatcc cggattcctg cgcgaacccg atcgcggccg gcgtgccgct gtcggggacc
      541 ggacagacca gatccgcctc gatcggcgcc tcgcgggcca gttcgacccc gatctggcgc
      601 cgggtctcat agaccgagcg gccgccgatg atcgaatcgg gacgcgagaa gtagacatgt
      661 tcgaagatgc agaaccggcc ggtcgaggga ccgaaggggc gagagctttc gaccttgccc
      721 ttggtgatga ccaccatctc gcccggttcg atctcgcgca cgaaatcggc accgatgatg
      781 tccagcgcgc aggtttctga tgccagacag aagccatcgt cgccgacctt gcccagaacc
      841 agcggccgca cgcccagcgg atcacgcacg ccgatcagct tggtccgggt catcgcgatg
      901 acgctgaacg cgccctcgac ccggcgcagc gcatccttca tccgttcggg gatgttgcgc
      961 tggatcgacc gcgccatcag gtggatgatg cattcgctgt ccgatgagga ctggaagatg
     1021 ctgccgcgtt cggtcagctc gcggcgcagg gcggcggcat tggtgatgtt gccgttatgg
     1081 gcgatggcgc agccgcccat cgagaattcg ccgaagaacg gttgcacgtc gcggatcgcg
     1141 gtattggcct tggtcccggc ggtggaatag cgcacatgcc cgatcgccag cggtcccggc
     1201 agcgtcgcca tcacgtcggt cttggtgaaa ttgtcgcgca ca
//
LOCUS       DTVW01001285            2902 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_618899, whole
            genome shotgun sequence.
ACCESSION   DTVW01001285 DTVW01000000
VERSION     DTVW01001285.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2902)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2902)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2902
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_618899"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..648)
                     /locus_tag="EYO87_17120"
     CDS             complement(<1..648)
                     /locus_tag="EYO87_17120"
                     /inference="COORDINATES: protein motif:HMM:PF13202.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EF-hand domain-containing protein"
                     /protein_id="HIC67678.1"
                     /translation="MIVPGPSGRVMQSGSVPGSKGIEESARRCADAGKSRDSRAGTLP
                     GGGPQPEAIDIRPGVRSCTGRGPAVASVLVRAPTGPRPSVVPASGCSCLRFAIALSRF
                     PRSQPVLQEPHPSSAKGSTAMKSRTKKRLTQKSPCEDWSGKKDWSGKKDWSGKKDRSG
                     KKGHMGASMMPAMVVAMMDTNGDGSLSLEEVQAVHERMFKMADADGNGQVSPKEIR"
     gene            complement(842..2020)
                     /locus_tag="EYO87_17125"
     CDS             complement(842..2020)
                     /locus_tag="EYO87_17125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010913653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HIC67679.1"
                     /translation="MEKIADRPAEPTAVRTDLGAIFVSLELSRSSWVVTALAPGSGER
                     MSRHGIPGGDIAGLLARFAQLRDKAQARTGRHFPIIVIQEAGLDGFWIHRALVNEGVE
                     SHVVDPASIATSRRRRRAKTDRLDGETLVRTLLAFKRGEPRVCAMVRAPSPEDEDRRR
                     ITRERKVLIAERVEHVNRIKGLLFAQGIRGYEPLRRDRRARLEDLRTGDGRDLPPHLK
                     AQILRELDRLELLLEQIKAVEAERDAALAEEPQDGETPAAAKMLLDIRGIGPEFAALL
                     WSEGLFRHFDNRRQVAAYAGLAPTPWQSGAVSREQGVSKAGNPRLRSTMIQLAWLWLG
                     HQPQSALTRWFRARVEQNGGRLRKTAIVALARKLLVALWKYVTSGVMIEGAAMKPSTP
                     "
     gene            complement(2255..>2902)
                     /locus_tag="EYO87_17130"
     CDS             complement(2255..>2902)
                     /locus_tag="EYO87_17130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011800732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrite reductase, copper-containing"
                     /protein_id="HIC67680.1"
                     /translation="GAALGSPGPGESYSFRFKALNAGLYVYHCAVAPVAQHISNGMYG
                     LILVEPEGGLPPVDREYYVMQGELYTEERIGTPGLLTESYDKLVDERPEYFVFNGHTG
                     ALTDHYPLKAKVGETVRIFFGVGGPNYTSSFHVIGEIFDRVYVHGSLETPPLKDVQTV
                     TVPAGGSAMVEFTCDVPGRFVLVDHALSRAEKGLAGYLMVEGEENPDLFASLDEG"
BASE COUNT          463 a         1012 c          919 g          508 t
ORIGIN      
        1 ccggatttcc ttggggctca cctgaccgtt gccatctgca tccgccatct tgaacatccg
       61 ttcgtggacg gcctgaacct cttcaaggga cagcgaacca tcaccgttcg tgtccatcat
      121 ggcgacgacc atcgcgggca tcatcgaggc gcccatgtga cccttcttgc cggagcgatc
      181 cttcttgccg gaccagtcct tcttgccgga ccagtccttc ttgccggacc agtcctcaca
      241 tgggcttttc tgggtcaagc gcttcttcgt tcggcttttc attgcggtcg atcccttcgc
      301 tgagcttgga tgcggttcct gaaggacggg ctgagacctg gggaagcgag acagcgcgat
      361 tgcaaatctc aggcaggaac accccgaggc cggcacgacc gaaggccgcg gccccgtcgg
      421 tgcgcgcacc aacacgctgg cgacggcggg gccgcggcca gtgcagcttc gtacgccggg
      481 tcggatgtcg atggcttcag gctgcgggcc tccgcccggc aaggtcccgg cgcgcgagtc
      541 acgcgatttc cccgcgtcgg cgcatcgcct ggcgctttct tcgatgccct tcgatccagg
      601 gacggagccc gattgcatga cgcggcccga tggcccgggc acgatcaacc tcacatccgg
      661 tcgccgccag ggacggctgc accaatatcc cgcgtgcggc gggcggggct cggagggggc
      721 gacacccttc ttgttaacgg tcctgttgtc aggccacgga ctggtacggc tcgcccgcct
      781 ggaccgatcc gggctgatca ggcccgggcc ggtattcgac gcatcaatgg ggacggcagg
      841 ctcagggggt gctcggcttc atggcggcac cctcgatcat cacgcccgat gtgacgtatt
      901 tccacagcgc caccagcagc ttccgggcca gcgcgacgat cgccgttttg cgcaggcgac
      961 cgccattctg ctcgacgcgc gcgcgaaacc agcgggtgag cgccgactgc ggctggtgcc
     1021 ccagccagag ccaggcgagt tggatcatcg tggagcgcaa tcgcggattg cccgccttcg
     1081 acacaccctg ctcgcggctc accgcgccgc tctgccatgg cgtcggagcc agccccgcat
     1141 aggccgctac ctgccttcgg ttgtcgaaat ggcgaaacag cccctccgac cagagaagtg
     1201 cggcgaactc cgggccgatg cccctgatgt ccagcagcat cttcgccgcc gcgggcgtct
     1261 cgccatcctg cggctcctcg gcgagcgcgg catcgcgctc ggcctccacc gccttgatct
     1321 gctcgagcag gagttccagc cggtcgagct cgcggaggat ctgcgccttc aggtggggcg
     1381 gcagatcgcg gccgtctccg gtgcgcagat cctccaaccg cgcgcgccgg tcccggcgca
     1441 gcggctcgta gccgcggatg ccctgcgcga acagcaggcc cttgatgcgg ttgacgtgct
     1501 ccacgcgctc cgcgatcagc accttgcgct cgcgcgtgat gcgccggcga tcctcgtcct
     1561 cggggctcgg tgcgcggacc atggcgcaga cccgcggctc gccgcgcttg aaggcgagca
     1621 gggtccggac cagcgtctcg ccatcgagcc ggtcggtctt cgcccggcgc cttcgtcgcg
     1681 acgtggcaat cgaggcggga tcgacaacgt ggctctcgac cccctcgttc accagcgcgc
     1741 ggtggatcca gaatccgtcg agcccggctt cctggatcac gatgatcggg aaatggcgcc
     1801 ccgtgcgcgc ctgcgccttg tcccgcagct gcgcgaaccg ggccagcagg cccgcaatgt
     1861 cgccgcccgg gatgccgtgg cgcgacatcc tctcgccgct ccccggcgcc agcgcggtga
     1921 cgacccagct cgaacggctg agttccaacg aaacgaagat tgcgccaaga tcggtgcgga
     1981 cggcggtcgg ttcggcgggg cggtcggcga ttttttccat gagcgtctcc agagtggtcg
     2041 gtccgatgaa caaccccact ctgtcagcga gccggacgcc gtccacctgc ccatgggatc
     2101 ttgttgcggc gaaaggcgcg ccgatggccg gaacctgcgc cccacccttt tccgccgcgc
     2161 gcgcggagcc aaacgcgcac ggcaatgctg tccatgctca agtcgtcggg cagttccggc
     2221 catgccattt caatcggctg atcgggtctt gacgctagcc ttcatccagc gacgcgaaca
     2281 gatccgggtt ttcctcgccc tcgaccatca gatatcccgc cagacccttt tccgcccgcg
     2341 acaacgcatg atcgaccaac acgaaccgtc cgggaacatc gcatgtgaac tcgaccatcg
     2401 ccgagccgcc ggccggcacc gtgacggtct ggacatcctt cagcggcggt gtctccagcg
     2461 atccgtgcac atagacccga tcgaagattt cgccgatgac gtggaaggac gacgtgtaat
     2521 tgggcccgcc gacaccgaag aagatgcgca ccgtctcgcc gaccttggcc ttgagaggat
     2581 agtgatcggt cagcgcgccg gtatggccgt tgaagacgaa atattcggga cgctcgtcga
     2641 cgagcttgtc gtagctttcg gtcagcaggc ccggggtgcc gatgcgttcc tcggtataaa
     2701 gttcgccctg catgacataa tattcccgat cgaccggcgg cagcccgcct tccggctcga
     2761 ccaggatcag gccatacatg ccgttcgaga tgtgctgagc cacgggcgca accgcgcagt
     2821 gatagacgta gagcccggca ttgagcgcct tgaacctgaa gctgtagctt tcgcctggcc
     2881 ccggcgagcc gagcgccgcg cc
//
LOCUS       DTVW01001286            2780 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_621981, whole
            genome shotgun sequence.
ACCESSION   DTVW01001286 DTVW01000000
VERSION     DTVW01001286.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2780)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2780)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2780
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_621981"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            432..947
                     /locus_tag="EYO87_17135"
     CDS             432..947
                     /locus_tag="EYO87_17135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011749744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease"
                     /protein_id="HIC67681.1"
                     /translation="MSDDPTERPHPVPLPRWLAALCRWFAALGGITLLAMMLMTVISV
                     TRRSLLGAPIPGDFELVEIGSAIAIFCFLPWCQSTGGNVLVDFFTQNASPRLNHRLEA
                     LGDLLYLLIAALLFWRMIPGGLEMRQYGEQSMVLRIPVWWSFIVILPAMALLVATCAA
                     TMIGHLGKARA"
     gene            944..2263
                     /locus_tag="EYO87_17140"
     CDS             944..2263
                     /locus_tag="EYO87_17140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011749745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease"
                     /protein_id="HIC67682.1"
                     /translation="MSGVAAGLTGFAVLLALMAIRVPIGVAMMTVGVGGYAAWTGVSP
                     LLAFLKTSTYYQFSTYSLSVIPLFVLMGEFATQAGMSRALYRTAAAFLGHRKGGLAMA
                     SIGGCAAFGAICGSSLATAATMGQVALPEMKRYNYSGALATGSLAAGGTLGILIPPSV
                     ILVLYALMAEMSIATMFVAAMVPGVLAALGYMAAIAIFVARNPDDGPAGPRATWAQRM
                     GALRETWSLIVIFALVIVGMYRGWFTPTEAAAVGAFGTGVLAVLHGGMRLTGIARCLR
                     GTATTSAMIFLILLGAETFNAFLAQTRTPMLLAEAIRNSGLTPMLVLLAMLALYLVLG
                     CVMDSMSMLLLTIPIFYPIIAGLDFGMPREETLIWFGILSVVVVEVGLITPPVGMNVF
                     VINGMARDVPMIESFRGVLPFLISDIIRIAALIAFPVVTLGLVRLLG"
     gene            2437..2763
                     /locus_tag="EYO87_17145"
     CDS             2437..2763
                     /locus_tag="EYO87_17145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008282583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1330 domain-containing protein"
                     /protein_id="HIC67683.1"
                     /translation="MPVYLIANVTVTDDAWVPGYAAKVHEIAAKHGGRYLSRSGNIET
                     IEGTPPGCTLIALIEFPSREAVRAFAEDPEYAPFAEGRRKGSVSDFHVIEDSDLAGGI
                     PYLPKG"
BASE COUNT          414 a          900 c          954 g          512 t
ORIGIN      
        1 ggcgctggcc ggcgaagcct tcgacaaggc cgaggcggcc gagcgtcaga aggcggtcga
       61 cgcgggtcac aatatcgtcg tgatccccga ggatcggctg ggcgaatggc aacaggccag
      121 tcagcccgtg atcgacgcct gggtgaaatc catgggcgaa aacggtcaga cgatgctgga
      181 cgatgccaag gcgatgctgg ccggggcacg gggcaaatag ggctgcggca gggcaaggcc
      241 ccgcgcgggg ggcctttggg gcgggcgctg cgaccgggca tgtcgggcgc cctgcgctgc
      301 gatccatccc catcccctcg ccgcgcccgg ccccgcgccc ggccccgatc caggccgcgg
      361 ccgggcggat accttccggg cagcgtgacg gcccgcggcg tccgatctgc acatcttcaa
      421 gggagacggc catgagcgac gatccgaccg aacgccccca tccggtgccg ctgccgcgat
      481 ggctggcggc cctgtgccga tggttcgccg ctttgggcgg gatcaccctg ctggcaatga
      541 tgctgatgac cgtgatcagc gtgacccggc gcagcctgct gggcgcgccc atccccggtg
      601 atttcgaact ggtcgagatc ggcagcgcca tcgccatctt ctgctttctg ccctggtgcc
      661 agtccaccgg cggcaacgtc ctggtcgatt tctttaccca gaacgccagc ccgcgcctca
      721 accaccggct ggaggccctg ggcgatctgc tctacctgct gattgccgcg ctgctgttct
      781 ggcggatgat ccccggcggg ctggagatgc gccaatatgg cgagcagtcc atggtcctgc
      841 gcattccggt gtggtggagc ttcatcgtca tcctgccggc catggcgctg ctggtcgcca
      901 cctgcgccgc gaccatgatc ggccatctgg gaaaggcccg cgcatgagcg gcgtcgccgc
      961 cgggctgacg ggtttcgcgg tgctgctggc gctgatggcc atccgtgtcc ccatcggggt
     1021 cgcgatgatg acggtgggtg taggcggata tgccgcatgg accggtgtgt cgccgctgct
     1081 ggcattcctg aaaacctcga cctactacca gttctcgacc tattcgctgt cggtcatccc
     1141 gcttttcgtg ctgatgggcg aattcgccac gcaggccggg atgagccggg cgctgtaccg
     1201 caccgccgct gcctttctgg gccatcgcaa gggcggactg gcgatggcct cgatcggcgg
     1261 atgcgcggcc ttcggcgcga tctgcggatc ctcgctggcg accgccgcca ccatgggaca
     1321 ggtcgccctg cccgagatga agcgatacaa ttacagcggc gcgctggcca caggctcgct
     1381 ggcggcgggc ggcacgctgg gcatcctgat cccgccgtcg gtgatcctgg tcctctatgc
     1441 gctgatggcc gagatgagca tcgccaccat gttcgtggcg gcgatggtgc cgggcgtgct
     1501 ggccgcgctt ggctacatgg ccgcgatcgc catcttcgtc gcccgcaatc ccgatgacgg
     1561 tccggccggc ccacgcgcga catgggctca gcggatgggc gcgctgcgcg agacgtggtc
     1621 gctgatcgtg atcttcgcgc tggtcatcgt cgggatgtat cgcggctggt tcacgcccac
     1681 cgaagcggcg gcggtcggcg ccttcggcac cggtgtcctt gcggtgctgc atggcgggat
     1741 gcggctgacg gggatcgcgc gatgcctgcg cggcacggcc acgacctcgg ccatgatctt
     1801 cctgatcctg ctgggggccg agaccttcaa cgcctttctg gcccagaccc ggacgccgat
     1861 gctgctggcg gaagcgatcc ggaattccgg cctgacgccg atgctggtcc tgctggcgat
     1921 gctggcgctg tatctggtgc tgggctgcgt catggattcg atgtccatgc tgctgctgac
     1981 catcccgatc ttctatccga tcatcgcggg tctcgatttc gggatgccgc gcgaggagac
     2041 cctgatctgg ttcggaatcc tctcggtcgt ggtggtcgag gtgggcctga tcacgccgcc
     2101 ggtgggcatg aacgtcttcg tcatcaacgg catggcaagg gacgtgccga tgatcgaaag
     2161 cttccgcggc gtcctgcctt tcctgatcag cgacatcatc cgcatcgccg cgctgatcgc
     2221 ctttccggtc gtcacgctgg ggctggtgcg gctgctgggc tgaaatttcg cagaaggcag
     2281 aagttcgcaa gacccgtcac cctgggtgcc gcgttgtcgg ccgatcgtgc cgaccgagaa
     2341 tcgggacgaa tactcagccc tatggcgggc ttggtcgggg acatgttcgg atttaggctg
     2401 gcagccgcac ggatcatgca agggagggaa agcaggatgc cggtctatct gatcgcgaat
     2461 gtcaccgtga cggacgatgc ctgggtgccg ggctatgccg cgaaggtcca cgagatcgcg
     2521 gccaagcacg gcggccgcta tctgtcgcgc agcggcaata tcgagacgat cgagggcacg
     2581 ccgccgggct gcacgttgat cgcgctgatc gaattcccct cgcgcgaggc cgtccgcgcc
     2641 tttgccgagg atcccgaata cgcccccttc gcggaaggcc gcagaaaggg cagcgtcagc
     2701 gattttcacg tcatcgagga cagcgacctt gccggcggca ttccctatct gcccaaggga
     2761 tagatcaggc agattgtcga
//
LOCUS       DTVW01001287            1688 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_623977, whole
            genome shotgun sequence.
ACCESSION   DTVW01001287 DTVW01000000
VERSION     DTVW01001287.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1688)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1688)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1688
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_623977"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..966)
                     /locus_tag="EYO87_17150"
     CDS             complement(<1..966)
                     /locus_tag="EYO87_17150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005619782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HIC67684.1"
                     /translation="MPGLHSAALGVWVNAGGRNERAEQNGIAHFLEHMAFKGTATRSA
                     LQIAEAIEDVGGFINAYTSRDATAYYVRVLEQDVDLAFDVISDIVLNPIFDEREIEVE
                     RGVILQEIGQALDTPDDIIFDWLQEAAYPDQAIGRPILGPAERVSRFGRPDLAGFVAE
                     NYGPGQMIVAAAGAVDHDRIVRLAETAFGHLSPILQNPRAGAVWQGREVRRVKKLEQA
                     HFALALEGPGYLSDDYYAAQIFSAALGGGMSSRLFQKIREERGLCYTIFAQSGFHDDT
                     GMMTIYAGTGGGDIADLAMLTIDEVRRAAGDISEIEVARAKAQLRA"
     gene            complement(1029..>1688)
                     /locus_tag="EYO87_17155"
     CDS             complement(1029..>1688)
                     /locus_tag="EYO87_17155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013068793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-phosphate dependent enzyme"
                     /protein_id="HIC67685.1"
                     /translation="GMRDTDFCVPTGNFGDIFAGSMARAMGAPIRRLIVATNQNDILH
                     RALSTGEYRVGEVAPSMSPSMDIQVSSNFERALYLAYGGDAGAIAQLMEELRSGGFTV
                     SQGALQALRAQYVSGRVGEEETLATIRTIRAETGQILCPHSAVGVAVARHHAEPGVPM
                     VTLATAHPAKFPDAVEKAVGIRPALPPHMAGLFDLPERVTRVENDTAALEALILERRT
                     I"
BASE COUNT          290 a          560 c          542 g          296 t
ORIGIN      
        1 cgcacgcaat tgcgccttgg cgcgggcgac ctcgatctcg ctgatgtcgc cggcggcgcg
       61 gcgaacctcg tcaatggtca gcatcgccag atcggcgatg tcgccacctc cggttccggc
      121 ataaatcgtc atcattccgg tatcgtcgtg gaaccccgat tgcgcgaaga tcgtatagca
      181 cagcccgcgt tcctcgcgga ttttctggaa cagtcgcgac gacatgccgc cgccaagcgc
      241 ggccgaaaag atctgcgcgg catagtaatc gtcggacagg tagcccggtc cttccaatgc
      301 cagggcgaaa tgggcctgtt ccagcttctt gacgcggcgc acctcgcggc cctgccagac
      361 ggcgccggcg cgcgggtttt gcagaatcgg cgacagatga ccgaaggcgg tctcggccag
      421 gcgcacgatg cggtcgtgat cgaccgcgcc ggccgccgcg acaatcatct ggccggggcc
      481 ataattctcg gccacgaacc cggccagatc gggccggcca aagcggctga cacgctcggc
      541 cggacccagg atcgggcggc cgatggcctg atcgggatag gcagcctcct gcagccagtc
      601 gaagatgatg tcatcgggcg tgtccagcgc ctgcccgatt tcctgcagga tcacgccgcg
      661 ttcgacctcg atctcgcgct cgtcgaagat cgggttcagc acgatgtccg agatcacgtc
      721 gaaggccaga tcgacgtcct gttccagcac ccggacataa taggcggtcg catcgcgcga
      781 ggtataggcg ttgatgaagc cgcccacatc ctcgatcgcc tcggcgatct gcagcgcgct
      841 gcgcgtcgcc gtgcccttga aggccatatg ttccagaaaa tgcgcgatgc cgttctgttc
      901 ggcgcgttcg ttccgacctc cggcgttcac ccagacgcca agcgcggcgg aatgcagacc
      961 cggcatgtcg cgcgtggcga tgcgcaggcc gttcggcaat gtggtgacgc gaagatgagg
     1021 atcggtggtc aaatcgttct ccgttcaagg atcagcgcct caagcgcggc ggtgtcgttt
     1081 tcgaccctcg tcacacgttc cggcagatcg aacagccccg ccatgtgcgg cggcaaggcg
     1141 gggcggatcc ccacggcctt ttcgaccgca tcggggaatt tcgcgggatg ggccgtggcc
     1201 agcgtcacca tgggcacgcc gggttcggca tgatggcgcg cgaccgccac gcccacggcg
     1261 ctgtgcgggc acaggatctg accggtttcg gcgcgaatgg tgcggatcgt ggccagtgtt
     1321 tcctcttcgc cgacacgccc agatacatat tgcgcgcgca gcgcctgcag cgcgccctgg
     1381 ctgacggtga aaccacctga tctcagttcc tccatcaatt gcgcgatcgc gcccgcatcg
     1441 ccgccatagg ccagatacag cgcccgttcg aagttggagc tgacctgaat atccatcgac
     1501 ggcgacatcg aaggcgcgac ctcgcccacc cggtattcgc ccgtgctcag cgcgcggtgc
     1561 aggatgtcgt tctggttcgt ggccacgatc aggcgccgga tcggcgcgcc catggcgcgg
     1621 gccatgctgc cggcgaagat gtcgccgaaa ttgccggtcg ggacgcagaa atccgtgtcg
     1681 cgcatccc
//
LOCUS       DTVW01001288            2509 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_628512, whole
            genome shotgun sequence.
ACCESSION   DTVW01001288 DTVW01000000
VERSION     DTVW01001288.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2509)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2509)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2509
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_628512"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..351)
                     /locus_tag="EYO87_17160"
     CDS             complement(<1..351)
                     /locus_tag="EYO87_17160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67686.1"
                     /translation="MDFREGGYVFSRHKVRREFSYDQDNWDGAGDAVSGDSRFAADPD
                     GSEGISVRLTRLTHYLGAVASVGLMVGLMVWGWQLVSRDVSGVPVIKAIAGDARTTPE
                     DPGGKLTSYTGYSVN"
     gene            complement(430..2172)
                     /locus_tag="EYO87_17165"
     CDS             complement(430..2172)
                     /locus_tag="EYO87_17165"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_353004.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HIC67687.1"
                     /translation="MNLFTDLRGIVIEALDQMAGAGEVPAGLDTANVTVEPPRDPAHG
                     DMATNAAMVLAKPAGMKPREIAEKLAARLTDPRIAGAEVAGPGFLNLRLAPSVWQGVV
                     RTAIRAGRDFGRSGIGAGHKVNVEFVSANPTGPMHVGHVRGAVFGDALANLLAFSGHE
                     VTREYYINDGGAQVDVLARSAYERYREANGLEPEIREGLYPGDYLIAVGEALKDRYGD
                     SLLERPEEEWLAEVRDFATEAMMGMIRQDLALLGVRMDIYSSEKALYGSGRIEAAIKR
                     LDSLGLIYRGVLEPPKGRLPEDWEAREQLLFRSTAHGDDVDRPIQKSDGAWTYFAPDI
                     AYHWDKIDRGFDQLIDVFGADHGGYVKRMNAAVKALSNGRVPLDIKLIQLVKLFRNGE
                     PFKMSKRAGTFVTLRDVVEEAGSDVTRFIMLTRKNDAALDFDFARVLEQSRDNPVWYV
                     QYASARVSSVLRRATEVGIDVSDSALADADLSKLAHQSELDLARKVAEWPRLVEHAAR
                     AHEPHRIAFFLYEIASDLHSLWNRGNDDQSLRFVQDGDSATSQAKIALVRAVGVVISA
                     GLGILGVTPVEEMR"
BASE COUNT          436 a          852 c          779 g          442 t
ORIGIN      
        1 attgaccgaa tagccggtgt aagaggtcag cttgccgccc ggatcctcgg gcgtggtgcg
       61 ggcatcgccc gcgatggcct tgatgaccgg cacgcccgaa acatcgcgcg acaccagttg
      121 ccagccccag accatcagcc cgaccatcag cccgaccgag gccacggcgc ccagataatg
      181 ggtcagccgg gtcaaccgaa ccgaaatgcc ttccgacccg tcgggatcgg ccgcgaatcg
      241 gctgtcgccg gatacggcat cgccggcgcc gtcccagttg tcctgatcgt aagagaattc
      301 gcgccgcacc ttgtgccgcg agaacacgta accgccttcg cggaaatcca ttactgccat
      361 agcctgcctg tctgccggtt gatccgactt gcctcgactg ctcgtccact tcggccgggg
      421 cgcctttggt cagcgcattt cctcgaccgg agtgacgcca aggataccca gaccggcgga
      481 aatgacaacg ccaaccgccc ggaccagcgc gatttttgcc tggctcgtgg ccgaatcgcc
      541 atcctggaca aagcgcagcg actgatcgtc attgccccgg ttccacagcg aatgcaggtc
      601 ggacgcgatc tcgtagagga aaaacgcgat ccgatgcggc tcgtgcgcgc gggcggcatg
      661 ttcgacaagg cgtggccatt cggcaacttt ccgggccagg tcaagttctg attgatgggc
      721 cagtttcgac agatcggcgt ccgcaagggc cgaatccgag acgtcgatgc caacctctgt
      781 cgcgcggcgc aggaccgaac tgacccgcgc gctggcatac tggacatacc agaccgggtt
      841 gtcccgggat tgttccagca ccctggcaaa gtcgaaatcc agcgccgcgt cgttcttgcg
      901 cgtcagcatg atgaaacggg tcacatccga acctgcctct tcgacgacat cgcgcagggt
      961 gacgaaggtg cccgcccgct tggacatctt gaagggctcg ccgttccgga acagcttgac
     1021 cagctggatc agcttgatgt ccagcggcac gcggccgttc gacaatgcct tcaccgcggc
     1081 gttcatccgc ttgacatagc cgccgtgatc ggcgccgaac acgtcgatca actgatcgaa
     1141 gccccggtcg atcttgtccc agtgataggc gatgtcgggg gcgaaatagg tccaggcgcc
     1201 atccgatttc tggatcggcc gatccacgtc gtcgccatgg gcggtcgatc tgaaaagcag
     1261 ttgttcgcgc gcctcccaat cctcgggcag tcggcccttg ggcggctcca gcacgccgcg
     1321 atagatcagg cccaagctgt ccaggcgctt gatcgccgcc tcgatcctgc cgctgccgta
     1381 aagcgccttt tcgctggaat agatgtccat ccggacgccc agcagggcca gatcctggcg
     1441 gatcatcccc atcatcgcct cggtcgcgaa atcgcgcacc tcggccagcc attcctcctc
     1501 ggggcgctcc agcaggctgt cgccgtatct gtccttcagc gcctcgccaa ccgcaatcag
     1561 gtaatcgccg ggatacaacc cttcgcggat ttccggttcc agcccattgg cctcgcggta
     1621 acgctcatag gccgagcggg ccagcacatc gacctgcgcg ccgccgtcgt tgatgtaata
     1681 ttcgcgtgtc acctcgtggc cggaaaaggc cagcagattg gccagcgcgt cgccaaagac
     1741 cgcgccgcgg acatggccca catgcatcgg gccggtcggg ttggcgctga cgaattcgac
     1801 attgaccttg tggcccgcgc cgatgccgga acggccgaaa tcgcggcccg cgcggattgc
     1861 cgtcctgacc acaccctgcc agaccgaggg cgcgaggcgc aggttcagaa agcccggtcc
     1921 cgccacctcg gcgcctgcga tgcggggatc ggtcagccgg gcggccagtt tttcggcgat
     1981 ctcgcgcggc ttcatgccgg cgggcttggc cagcaccatc gcggcattgg tcgccatgtc
     2041 gccatgggcc ggatcgcgcg gcggctcgac cgtgacattg gcggtgtcga gaccggcagg
     2101 cacttcgccc gccccggcca tctggtccag cgcctcgatg acgataccgc gaagatcggt
     2161 gaaaaggttc atgatcggct tcctgacatt cagcctgccg gttatcgcct gcggatatgg
     2221 aaggtcaaca gcggtggccg aagcgcgcca ggaagcaggg gcatctgtcg gcgatcccgg
     2281 catcggaaac gcgcccaccg gtcccggtca gggggcgatg cgcggccgga cgacccccgc
     2341 cgcgccggga ttgcggtcgg gggatccgcg accgggacgg gaatgcccgc ccggtcggat
     2401 cgtcagtcct gcgaatcccg atcctttcgg tctttcggcc gttcctcgtc ctccagcgcc
     2461 gcatccggat cgggctggct gctgtgatcc tcatcgctgt ccggatcgg
//
LOCUS       DTVW01001289            1220 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_651548, whole
            genome shotgun sequence.
ACCESSION   DTVW01001289 DTVW01000000
VERSION     DTVW01001289.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1220)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1220)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1220
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_651548"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..853)
                     /locus_tag="EYO87_17170"
     CDS             complement(<1..853)
                     /locus_tag="EYO87_17170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010399381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hint domain-containing protein"
                     /protein_id="HIC67688.1"
                     /translation="MQDDNGDGQLLTNNWRGEQEKISYSLNGTQTASHEIDGAFTATE
                     VAITRLLPDGRTDTVKSMVRIFQDTSGNVFMIPPPVQDSTQAEVAAVTTYPIVSIALP
                     RAQDFNVNYNAAYAGRHDMASFATVTPPCFTLGTMILTDRGERAVEDLVPGDLVWTRD
                     HGLQPIRWVGRRRLDPPALVAMPRMRPIRIRVGALGDGLPRHDLVVSPQHRVLVRSPI
                     AQRMFGASELLVAAKQMTEMPGIEPAADLDEVTYLHLMFDQHEIVLSNGAETESLYPG
                     PQALLSLG"
BASE COUNT          238 a          362 c          382 g          238 t
ORIGIN      
        1 gtcccagaga cagcagcgcc tgcgggccgg gatagagtga ttcggtctcg gccccgttcg
       61 acagcacgat ttcgtgctgg tcgaacatca gatgcagata ggtcacctca tccagatccg
      121 cggccggttc gatgccaggc atctcggtca tctgcttggc cgcaaccagc aattcggatg
      181 cgccgaacat gcgctgcgcg atgggtgagc ggaccagaac ccggtgctgg ggcgacacga
      241 ccagatcgtg acgtggcagg ccgtcgccca gggcgcccac gcggatgcgg atggggcgca
      301 tccgcggcat cgccaccagc gccggcggat ccagtcggcg ccgtccgacc cagcggatcg
      361 gctgcaagcc gtgatcgcgg gtccagacca gatcgcccgg caccagatcc tcgacagccc
      421 gttcgccccg atcggtgagg atcatcgtgc ccagggtaaa gcagggcggg gtgacggtcg
      481 cgaacgaggc catgtcatgg cgcccggcat aggccgcatt gtaattgacg ttgaaatcct
      541 gcgcccgcgg cagcgcgatc gagacgatgg gataggtggt cacggccgcg acctcggcct
      601 gcgtgctgtc ctgcaccggc ggcggaatca tgaagacgtt gcccgatgtg tcctggaaga
      661 tgcggaccat gcttttgacc gtatcggtcc ggccatcggg caataggcgg gtgatcgcga
      721 cctcggtggc ggtgaaggcg ccatcgatct cgtgcgaggc ggtttgcgtt ccgttcagcg
      781 aatagctgat cttttcctgc tcgccccgcc agttgttcgt cagcaactga ccatcgccgt
      841 tgtcgtcctg catcgtgacg gcggtcagct tgccgtaaag cggatcctcg gcgctgccga
      901 aggatttccc ggcaaagatc cgtgtcgctt tttccgaggc aaagctgcgt tcgtcaggat
      961 cgatgtccgc gaactggccc agatggatca tgttgtaggt cgggtattcg atcattttga
     1021 aaccatccac gctgaaaact cgacgatggc tatcacgtcc gacctggaaa cgcatgggga
     1081 ttgagtttga aaatttatta aaatcaggtt gttaacctaa aaataacgcc cgcggaacgc
     1141 tgattgcata cagtcgcata cattctttcc tttcgcgacc ggacggggta tgaccgcggc
     1201 aatccgaatc caacgccaaa
//
LOCUS       DTVW01001290            2222 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_651613, whole
            genome shotgun sequence.
ACCESSION   DTVW01001290 DTVW01000000
VERSION     DTVW01001290.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2222)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2222)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2222
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_651613"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..684)
                     /locus_tag="EYO87_17175"
     CDS             complement(<1..684)
                     /locus_tag="EYO87_17175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019170348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotransferase family protein"
                     /protein_id="HIC67689.1"
                     /translation="MSDLDTSALGNWLKEKLPGQDGLSYERIGGGQSNPTWFVDFGTR
                     RMVLRKKPAGPILKGAHAIEREFRVLRALEETPVPVPRALWLEEDTSILGTPFYVMDR
                     LHGRVFSSSSLPGVAAGERREMYLDMARVLAGLHAVRPDEIGLGDFGRPGNYFQRQID
                     RWSGQYAASAGPRIPALDRLVAWLPDHIPPEDGAVSIAHGDFRIGNLMYHPTEPRVIA
                     VLDWELATLG"
     gene            complement(709..1911)
                     /locus_tag="EYO87_17180"
     CDS             complement(709..1911)
                     /locus_tag="EYO87_17180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018430913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
                     /protein_id="HIC67690.1"
                     /translation="MDFTITPEIEDYRARIARFVEDEILPVEEDRSNWDEHDNIARPA
                     LEPLRQKAKDQGLWAVQMPKSAGGQGMPFTGVAVCYEEMNRSIFGPVVFNGAAPDDGN
                     MRVLEQVATEDQKARWLAPIVAGEVNSSFVMTEPHPGGGSDPGMMLTTATKKGDNYVI
                     RGRKWFITGAADAKHFILLARTSDDPRRGLTAFLHASDEPGFRIDRRIPIMGPEEHGG
                     HCEIYYEDMVLPADRVLAGEGLGLRITQTRLGPARLTHCMRWLGLSKRCMEIAKDYAQ
                     NRHGFGVRLSDRESIQIKLGDLAMGIEVGRLLVMKAAWEIEHGRFAKKEVSMAKIHVA
                     NLLHKAADVAIQINGARGYSKDTVLEWIYRYARQARLVDGADEVHQMVLNRHFTDEDR
                     NFWTWDVA"
     gene            complement(1923..>2222)
                     /locus_tag="EYO87_17185"
     CDS             complement(1923..>2222)
                     /locus_tag="EYO87_17185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007802178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HIC67691.1"
                     /translation="SAYAASKAGLIQLTRSLALEWARHGIRVNSLCPGYVETDLNRDF
                     FATEAGKALIRRVPQRRLGQAEDLDGPLLLLASDLGRFMTGSEIVADGGHLVTSI"
BASE COUNT          378 a          749 c          683 g          412 t
ORIGIN      
        1 cccgagcgtt gccagttccc agtccagcac cgcgatgaca cgcggttccg tcggatggta
       61 catcaggttg ccgatccgga aatcgccatg tgcaatcgat acggccccat cttcgggcgg
      121 gatgtgatcc gggagccatg cgacgagccg gtcgagcgcc ggaatgcgtg gtccggcaga
      181 tgcggcgtac tggccggacc agcgatcgat ctgccgctga aagtaattgc cgggccgacc
      241 gaagtccccc aggccgatct cgtccgggcg gacggcgtgg agcccggcga ggacacgtgc
      301 catgtccaga tacatctcgc gccgctcccc ggcggcgacg ccgggaaggc tgctggagga
      361 aaagaccctg ccgtgcaacc ggtccatcac atagaacgga gtgcccagga tcgacgtatc
      421 ctcctcgagc cagagcgcac ggggcaccgg gactggcgtc tcctccaacg ccctcaggac
      481 ccggaactcc cgttcgatcg catgggcccc tttcaggatc ggtccggccg gcttcttccg
      541 aagcaccatg cgacgcgttc cgaagtccac gaaccaggtc gggttggact gtcctccgcc
      601 gatccgttca tagctgaggc catcctgccc cggcagcttc tctttcagcc agttgccaag
      661 tgccgatgtg tcgagatcgc tcatcccctg ccctccctgt cgcgcttctc aggcgacatc
      721 ccatgtccag aagttgcggt cttcgtccgt gaaatggcgg ttcagcacca tctggtgcac
      781 ctcgtctgcg ccgtcgacca gccgggcctg ccgggcgtag cgatagatcc actccagaac
      841 cgtgtccttg gaatagcccc gcgcaccgtt gatctggatc gccacatccg ccgccttgtg
      901 caacaggttc gcgacgtgga tcttggccat cgagacttct ttcttcgcga accgcccatg
      961 ttcgatctcc cacgcggcct tcatgaccag aagccgcccg acctcgatcc ccatggcaag
     1021 gtcgcccagt ttgatctgga tgctttcgcg gtcggacaga cgcacgccga agccgtgccg
     1081 gttctgggcg tagtccttgg cgatctccat gcagcgcttg gacaggccca gccagcgcat
     1141 gcagtgggtc agccgggcgg ggccaagccg ggtttgggtg atgcgcagtc ccagcccctc
     1201 gcccgccaga acgcggtcgg cgggcaggac catgtcctca tagtagatct cgcaatggcc
     1261 gccgtgctct tcggggccca tgatggggat gcggcggtcg atcctgaagc cgggctcgtc
     1321 ggaggcatgc aggaatgccg tcaggccccg ccgcggatcg tccgaggtcc gagccagcag
     1381 gatgaagtgt ttggcatccg ccgccccggt gatgaaccac ttgcggcccc gaatgacata
     1441 attgtcgccc ttcttcgtgg ccgtcgtcag catcatcccc ggatcggatc cgccgcccgg
     1501 atgcggttct gtcatcacaa acgaggaatt gacctctccc gccacgattg gcgccagcca
     1561 gcgggccttc tggtcctcgg tcgccacctg ttccagcacc cgcatgttcc cgtcgtcagg
     1621 ggccgcgccg ttgaagacga caggcccgaa tatcgagcgg ttcatctctt cgtaacaaac
     1681 tgcgacaccg gtgaagggca tgccctgccc gcccgcgctt ttaggcatct gcacggccca
     1741 gagaccctga tccttcgcct tttgccgcag cggctcaagc gcgggacggg cgatattgtc
     1801 gtgttcatcc cagttcgacc gatcctcttc gacgggcaga atctcgtcct cgacaaatcg
     1861 cgcgatgcgg gcgcgatagt cctcgatctc gggggtgatg gtaaaatcca ttggtctatc
     1921 cttcagatgg aggtcacgag atgaccaccg tcggccacga tctcgcttcc ggtcatgaac
     1981 ctcccgaggt ccgaggccag cagcagcagg gggccgtcga ggtcttccgc ctgtccgaga
     2041 cgccgttgag gtacacgccg gatcagggcc ttgcccgcct cggtcgcgaa gaagtcgcgg
     2101 ttgaggtcgg tctcgacata gccggggcac agcgagttca cccggatacc gtggcgagcc
     2161 cattccagcg caagcgagcg ggtcagctgg atcaggccgg ccttcgaggc cgcgtaggcc
     2221 ga
//
LOCUS       DTVW01001291            1286 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_651769, whole
            genome shotgun sequence.
ACCESSION   DTVW01001291 DTVW01000000
VERSION     DTVW01001291.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1286)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1286)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1286
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_651769"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1216)
                     /locus_tag="EYO87_17190"
     CDS             complement(<1..1216)
                     /locus_tag="EYO87_17190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS-assembly protein LptD"
                     /protein_id="HIC67692.1"
                     /translation="MIGARGKGLSITAGIAAALLPGAIWAQMTTGGAGEVSGAGGAPL
                     STLSAQQPALAPLATPLSDRMVLGDRTPEQPPLQSVAPDTTGDSLGQPFTPSSATADA
                     ATVLADRMILQADNTLIASGGVVVWYQDARLVASRIIVNGDSGDLTIEGPIHLSRPGV
                     TDPGRDAIVIADSAQLDRKLQDGIIRGARLIIARELQLAARQATRSGEGRFTRLDRVV
                     ASACLVSPQNPTPLWEIRARSITHDAQTRLITFENPQLRAFGIPIAATPFTITAPDPT
                     VDRKSGFLRPEIRTTSNLGFGVKIPYFQTLGDQADLTITPYVSANRTRTLELRYRQAF
                     ARGVTEWNGAISRDDIMPGKTRGYVFGNAAFDLPRGYRLGIQVQAASDRGYLLDYGIT
                     DADRLWSGISLER"
BASE COUNT          216 a          423 c          438 g          209 t
ORIGIN      
        1 tccgctccag cgagatgccg ctccacagcc ggtcggcatc ggtaatgccg taatccagca
       61 gatagccgcg atcggaggcc gcctggacct ggatgcccag ccggtagccg cgcggcagat
      121 cgaaggctgc attgccgaaa acatagccgc gcgtcttgcc cggcatgatg tcgtctcggc
      181 tgatcgcgcc gttccattcg gttacgccac gtgcgaatgc ctgacgatag cgcaattcca
      241 gcgtccgcgt gcgattggcc gaaacatagg gcgtgatggt cagatccgcc tgatcgccga
      301 gggtctggaa ataggggatt ttcaccccga aacccagatt cgaggtcgtg cggatttcgg
      361 gccgtagaaa gcccgatttc cgatcgaccg tcgggtcagg cgctgtgatc gtgaaaggcg
      421 ttgcggcaat ggggatgccg aaggcgcgaa gctgcgggtt ctcgaaggtg atcagcctgg
      481 tctgggcgtc atgcgtgatc gaacgggcgc ggatttccca caacggggtg ggattctggg
      541 ggctgaccag acaggccgag gcgacaacgc ggtccagcct ggtgaatcgc ccctcgccgc
      601 tgcgggtggc ctggcgtgcc gccagttgca attcgcgggc gatgatcagc cgcgcgccgc
      661 ggatgatccc gtcctgcaac ttgcggtcaa gctgcgcgga atcggcgatc acgatcgcgt
      721 cacgcccggg atcggtgacg cccgggcgcg acaggtggat cgggccctcg atggtcagat
      781 cgccgctgtc gccgttcacg atgatgcgcg aggcaacgag gcgcgcatcc tgataccaga
      841 ccaccacgcc acccgacgcg atcagggtat tgtcggcctg caggatcatc ctgtcggcca
      901 gcaccgtcgc cgcgtctgcc gtggcgctgc tgggtgtgaa cggctgacca agggaatcgc
      961 cggtcgtatc gggggccacc gattgcagcg gcggctgttc gggggtgcga tcgccaagca
     1021 ccatccgatc gctcagcggc gtggccaggg gcgcaagggc gggttgctgc gcgcttagcg
     1081 tcgacagcgg cgcgccgccc gcgcccgaaa cctcgcccgc gccgccggtc gtcatctggg
     1141 cccaaatcgc gcccggcagc aatgcagccg cgatcccggc cgtgatcgaa agtccttttc
     1201 cgcgtgcgcc gatcatccat cctcccgcgc caggatcacg cccagggcca gcagcgcacc
     1261 gaccagcggc ggcgcccagc ccgcca
//
LOCUS       DTVW01001292            1291 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_657482, whole
            genome shotgun sequence.
ACCESSION   DTVW01001292 DTVW01000000
VERSION     DTVW01001292.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1291)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1291)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1291
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_657482"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            187..>1291
                     /locus_tag="EYO87_17195"
     CDS             187..>1291
                     /locus_tag="EYO87_17195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HIC67693.1"
                     /translation="MTTLKRFLVLSGLCAVLAQPGAALAQQPGGGEAPPPKVTVVTLQ
                     ARDVTLTASLPGRVVASAEAELRPQVAGLITERLFEEGSPVRAGDPLYRIDPRSYEAA
                     LAQAEASLSQAQAQASAAARDAERVGALRDRRVASEQSQDSAIAARDAAEAQVKAAEA
                     QVQAARIELDRTTITAPIDGVIGLAQASPGALVTAGQASPLAVIRRIDPVRVDVTQSA
                     AEILRWQRQGADAALPAGADRTVALRLADGSSYEYTGSLTAAEPRVDETTGVVTLRLE
                     FANPDGFLLPGMYVLAEIPQGQIKDAILAPQEGVTRDRRGRPVAMVVNADNVVEQRQL
                     DIVQDRGNNWVVRDGLSAGDRLIVAGLQRIGAGM"
BASE COUNT          184 a          446 c          470 g          191 t
ORIGIN      
        1 gggcgctggc ccggccggat tttgccgcct gagcaggcac cttgcgtcat attcgggcag
       61 gttccgcgaa agcggcgttt cggcggttgt ccttggccga tccggccggt aggttccggg
      121 cgatgcgccg gcgctcggcc gcttgcgtgc tttcgacatg acaattgatc aggattggcg
      181 ggccgcatga cgacgctgaa acggttcctt gttctttcgg gtctctgcgc ggttctggcg
      241 cagcccggcg cggccctggc ccagcagccc ggcggtggcg aggcgccgcc gccgaaggtg
      301 acggtggtca cgttgcaggc acgggacgtg acgctgacgg ccagcctgcc gggtcgcgtc
      361 gtcgcttcgg ccgaggccga gctgcgccca caggtcgccg gtctcatcac cgagcgattg
      421 ttcgaggaag gcagccccgt ccgcgccggc gatccgctgt accggatcga cccgcgcagc
      481 tatgaagccg ccctcgcaca ggccgaggca tcgctgtcgc aggcccaggc gcaagcctct
      541 gccgccgccc gcgacgccga gcgggtcggc gcgctgcgcg accgccgcgt cgccagcgaa
      601 caaagccagg acagtgccat tgccgcccgc gacgcggccg aggcgcaggt gaaggccgcc
      661 gaggcgcagg tgcaggcggc gcggatcgag ctggaccgga ccacgatcac cgcccccata
      721 gacggggtga tcggtctggc ccaggccagt cccggcgccc tggtcacggc tggtcaggcc
      781 agcccgctgg cggtgatccg gcgcatcgat ccggtgcgcg tggacgtcac ccagtcagcg
      841 gccgagatcc tgcgctggca gcgccagggg gccgatgccg cgctgccggc gggcgctgac
      901 cgcactgtcg cgctgcgtct ggccgatggc agcagctacg aatacaccgg ctcgctgacc
      961 gcggccgagc cgcgcgtgga cgagacgacc ggagtcgtga ccctgcggct ggaattcgcc
     1021 aatcccgacg gcttcctgtt gcccggcatg tatgtgctgg ccgaaattcc gcagggccag
     1081 atcaaggacg cgatcctcgc cccgcaagag ggggtgaccc gcgaccgacg cggccgcccc
     1141 gtcgccatgg tcgtgaatgc cgacaacgtg gtcgagcagc ggcaactgga tatcgtgcag
     1201 gatcgcggca acaactgggt cgttcgcgac ggcctgtcgg cgggcgaccg cctgatcgtc
     1261 gccggtcttc agcgtatcgg ggcgggcatg a
//
LOCUS       DTVW01001293            3102 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_669527, whole
            genome shotgun sequence.
ACCESSION   DTVW01001293 DTVW01000000
VERSION     DTVW01001293.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3102)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3102)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3102
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_669527"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..948
                     /locus_tag="EYO87_17200"
     CDS             <1..948
                     /locus_tag="EYO87_17200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009824455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HIC67694.1"
                     /translation="IATGARPMTLNIPGEELLATSTDFLELPERPDRIVFVGGGFIAM
                     EFAHISRRAGAREVTVLEMQDRPLGNFDPDLVDVLVEATTELGVDLRTGAKVLKIERR
                     GQDFAVTCETRQGTETVVCDLVVHATGRVPNIDHLDLEAAGVEYGRKGIRVSPFMRTT
                     NPAIFAAGDCADSGPNLTPVSALEGRIAGKNLLAGKDERRVDDRPIPSVVFTLPQMAT
                     VGLSEAAARDRGLDFETRFAKTADWYSSLRVGAKHSAYKVLVEKATGRILGAHLLGPG
                     AEEQINLFAMAMAAGLTATAIKGVTFAYPSFASDIGSMV"
     gene            complement(1100..1453)
                     /locus_tag="EYO87_17205"
     CDS             complement(1100..1453)
                     /locus_tag="EYO87_17205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018303522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HIC67695.1"
                     /translation="MAKLVNTDIKENRPSLPVLQARAAEVAGQLGLLANTSRLMVLCH
                     LLEGEQSVGALQIQLDLSQSALSQHLARLRDAGMVATRRDRQTIFYRIADPRVHQMIE
                     ALYLIYCASEDDSDG"
     gene            1514..1963
                     /locus_tag="EYO87_17210"
     CDS             1514..1963
                     /locus_tag="EYO87_17210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018303523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeeE/YedE family protein"
                     /protein_id="HIC67696.1"
                     /translation="MEPVVATDFTPWLSLTGGVLIGISAVTVMGLFGKIAGISGITKG
                     LTGLVPGLGGPDDRGWRLAFLLGLVAAPVAVLLVTGSFPQQTVSGNLPGMALAGLLVG
                     TGTALGSGCTSGHGVCGLARLSRRSLVAVCVFLAAAVLTTTLIRHVI"
     gene            1974..2408
                     /locus_tag="EYO87_17215"
     CDS             1974..2408
                     /locus_tag="EYO87_17215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018303524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeeE/YedE family protein"
                     /protein_id="HIC67697.1"
                     /translation="MRPVLGFFAGLTFGIGLILSGMANPAKVLNFLDIFGAWDPSLAF
                     VMGGASVTAFIGYRLVWRRDAPALGPGFDMPDNTAIDAPLLTGAAIFGTGWGLGGFCP
                     GPAWTALAMGAPGTLIFLPAMLIGIVLGGRAKSFTIFTAKGA"
     gene            2411..>3102
                     /locus_tag="EYO87_17220"
     CDS             2411..>3102
                     /locus_tag="EYO87_17220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007117610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HIC67698.1"
                     /translation="MSEPSKLDQPIVRHSPSTGAQSPDVWGIYEPDTGSIQYICADPA
                     TRKAALIDVVLNFDPAAFSIDTRSMDQVLKLVEEHGLSVEWVLDTHPHADHAMASARL
                     KERTGAPNAIGEKVADIADLWRGFYNMPKAFDPARDFDRLFADGDSFKLGDLDVRVML
                     STGHTMGSITYICGDAAFVHDTLMQPDSGTARADFPGGSTEELWNSLQAILALPGDTR
                     LFIGHDYGADGR"
BASE COUNT          532 a         1004 c          995 g          571 t
ORIGIN      
        1 atcgccaccg gcgcccggcc gatgacgctg aacattcccg gcgaagagct tctggcaacc
       61 agcaccgatt ttctggaatt gcccgaacgg cccgacagga tcgtgttcgt cggcggcgga
      121 ttcatcgcga tggagttcgc ccatatctcc cggcgcgcgg gggcgcgcga agtcacggtc
      181 ctggaaatgc aggaccggcc gcttggaaat ttcgatcccg atctggtcga cgttcttgtc
      241 gaagcaacga ccgagctggg cgtcgatctg cggaccgggg cgaaggttct gaagatcgaa
      301 agacgcggac aggacttcgc ggtgacttgc gagacgcggc aggggacgga aacggtcgtc
      361 tgcgatctcg tggttcatgc caccggccgc gtgcccaata tcgaccatct cgaccttgaa
      421 gccgcgggcg tcgaatacgg tcgcaagggc atcagggtca gccccttcat gcgcacgacc
      481 aacccggcca tcttcgccgc cggagattgc gccgatagcg gtccgaatct gacccccgtc
      541 tcggccctcg agggccggat cgcaggcaag aacctgcttg ccggaaagga tgagcgccgg
      601 gtggatgatc ggccgattcc aagcgtcgtc ttcaccttgc cccagatggc gacggtcggc
      661 ctgtccgaag ctgccgcgcg cgacagggga ttggatttcg agacccgttt cgcgaagacg
      721 gcggactggt attcgtcgct gcgggtgggt gcgaaacaca gtgcctacaa ggttctggtc
      781 gaaaaggcga ccggcaggat cctgggggcg catctgcttg gccccggtgc cgaagagcag
      841 atcaacctgt tcgcgatggc gatggctgcg ggcctgaccg cgaccgcgat caagggcgtc
      901 acctttgcct atcccagctt tgcgtcggat atcggctcga tggtctagac tgcgcattgg
      961 ccgggtcaaa ccggcaggaa tttaccaaac gcgccgacgc catgcccatg cgcggggcct
     1021 tgttgccgcg ccgtcagcgc cccccccaat gcgtcaaggc tgggatcgac ggtgcgggaa
     1081 ctctgctgcc gcgatccgcc tagccgtcgc tgtcgtcttc cgatgcgcaa tagatcagat
     1141 acagcgcctc gatcatctga tgcactcgcg ggtcggcgat acggtagaag atcgtctgcc
     1201 ggtcgcggcg cgtcgccacc attcccgcgt cgcgcaaccg ggcaagatgc tggctcagcg
     1261 cagactggct caggtccagt tggatctgca acgctccgac cgattgctca ccctccagaa
     1321 gatggcacag caccatcagc cggctggtgt tcgccaacag gccaagctgc cccgcgacct
     1381 ctgcggcgcg cgcctgcaag accggcagcg agggccgatt ttcttttata tcagtgttga
     1441 ctaatttagc catcacttac atataacgac tcatccggcg aaagccaagg gtaacgaatg
     1501 agaggagacc ggcatggaac ccgtcgtcgc gaccgatttc acaccatggc tgtcgctgac
     1561 cggcggtgtg ctgatcggaa tcagcgcggt gacggtgatg ggcctgttcg gcaagatcgc
     1621 agggatcagc ggcatcacga agggcctgac cggccttgtg ccggggcttg gcggacccga
     1681 cgaccgcggg tggcggcttg ctttcctgct gggcctggtc gcggcgccgg tcgctgtcct
     1741 gctggtgacc ggatcgtttc cgcaacagac cgtatccggc aacctgcccg gcatggccct
     1801 tgcgggactg ctggtcggga cgggcaccgc actgggatcg ggctgcacct cgggacatgg
     1861 cgtctgcggt ctggcgcgcc tgtcgcgccg gtcgctggtc gccgtatgcg tgttcttggc
     1921 cgcagccgtc ctgaccacca ccctgatccg ccacgtgatc tgaggagccg atcatgcgtc
     1981 ccgtcctggg tttcttcgcc ggtctgacct tcggcatcgg gctgatcctg tccggcatgg
     2041 cgaatcccgc caaggttctc aatttcctag acatcttcgg cgcctgggat cccagcctcg
     2101 ccttcgtcat gggcggcgct tcggtgacgg ccttcatcgg ctatcggctg gtctggcgtc
     2161 gagatgcccc cgccctcggg ccgggattcg acatgccgga caacaccgcc atcgacgccc
     2221 cgctgctgac cggcgccgcc atcttcggaa ccggctgggg gctgggcggg ttctgccccg
     2281 gcccggcctg gacggcgctg gcgatgggcg cgcccggaac gctgatattc ctgcccgcaa
     2341 tgctgatcgg catcgtgctg ggcggacgcg cgaaatcttt cacgatcttc acagcgaaag
     2401 gagcctgatc atgtcagagc cgtcaaaact ggaccagccg attgtccggc actcgccgtc
     2461 gaccggcgca caaagccccg atgtctgggg gatctacgaa cccgataccg gatcgatcca
     2521 gtatatttgc gccgatccgg cgaccaggaa ggccgcgctg atcgacgtcg tgctgaattt
     2581 cgatccggcc gccttttcca tcgacacgcg cagcatggat caggttctga aactggtcga
     2641 agaacatggc ctgtcggtgg aatgggtgct ggacacgcat ccccatgccg atcacgcgat
     2701 ggcctcggcg cggctgaagg aacgcaccgg cgcccccaat gccatcggcg agaaggtcgc
     2761 cgacatcgca gatctttggc ggggtttcta caacatgccc aaggccttcg atccggcccg
     2821 cgatttcgac cggctgtttg ccgatgggga cagcttcaag ctcggcgatc tggacgtccg
     2881 ggtgatgctg tcgaccggtc acacgatggg gtcgatcacc tatatctgcg gcgacgcggc
     2941 cttcgtacac gacacgctca tgcagcccga cagcggcacc gcgcgcgccg actttcccgg
     3001 tggcagcacc gaggaattgt ggaactcgct gcaggccatc ctggccctgc cgggcgacac
     3061 gcgcctgttc atcggccatg actacggcgc cgacggccgc ga
//
LOCUS       DTVW01001294            1791 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_695563, whole
            genome shotgun sequence.
ACCESSION   DTVW01001294 DTVW01000000
VERSION     DTVW01001294.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1791)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1791)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1791
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_695563"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..278
                     /locus_tag="EYO87_17225"
     CDS             <1..278
                     /locus_tag="EYO87_17225"
                     /inference="COORDINATES: protein motif:HMM:PF15887.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67699.1"
                     /translation="TAAHLQHMVDFSDSFINAGLSMPGIPAGYAPYDDDQTQQMLDIA
                     ARIAIAVNDINRALDNSDLYPFVLTPTIREKIGFAHRWLKHHAEQGA"
     gene            complement(376..>1791)
                     /locus_tag="EYO87_17230"
     CDS             complement(376..>1791)
                     /locus_tag="EYO87_17230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005982673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HIC67700.1"
                     /translation="LAQAPDLMLLDEPTNHLDIEAIGWLEDQLSQTRAAYVLISHDRA
                     FLRRLTRATLWIDRGEMRRQERGFAHFEDWRESVWSAEDDARHKLDRKIRAEARWAVE
                     GISARRKRNQGRVRALAALRAERAARIRRQGTAAMALEPGAQSGKKVIEARGIAKAYD
                     DRVILKPFDLLVNRGDRIAFVGPNGVGKTTLIKMLTKEIAPDQGAVTLGTNLDLAVFD
                     QARAALNPDQSLWESLTSDPELGASGGADQVMVRGQPRHVVGYLKDFLFDEAQARAPV
                     RSLSGGEKARLLLARLMARPSNLLVLDEPTNDLDVETLDLLQDLLGDYDGTVLLVSHD
                     RDFIDRVADTTVAMEGDGRATVYAGGWTDYRAQRAEMAVTQPAAGKAQAKPQPAPRTG
                     GPVRSGLSFTEKHRLDELPGIIARLEAEIARLSEFLAQPDLYQTAPAKAQKATMALTE
                     RQVALNAAEEEWLELEERAAG"
BASE COUNT          290 a          626 c          563 g          312 t
ORIGIN      
        1 aaacggcggc gcatcttcag cacatggtcg atttcagcga cagcttcatc aatgccggtt
       61 tgtcgatgcc gggcatcccc gccggctatg cgccctatga cgacgatcag acccagcaga
      121 tgctggatat cgccgccaga atcgccatcg cggtcaacga catcaaccgg gcgctggaca
      181 acagcgacct ctatcccttc gtgctgacgc cgacgatccg cgaaaagatc ggtttcgcgc
      241 atcgctggct gaaacatcac gccgaacagg gcgcctagga cacaagaggc gctgccccgc
      301 gctgtcatca aagcacggcg gccgggcgtc gcgggcgggt gtcggcggcg cccgatttgc
      361 agcgcgcgta aaggctcagc ccgccgcccg ttcctcgagc tccagccatt cctcctcggc
      421 cgcattcagg gccacctgcc gttcggtcag cgccattgtc gccttctgcg ccttggcggg
      481 cgccgtctgg taaaggtcgg gctgggcgag aaactcggac aatcgggcga tctcggcctc
      541 gagccgcgcg atgatcccgg gcaactcgtc aagtcggtgc ttttcggtaa agctgagccc
      601 ggacctgacc gggccaccgg tcctgggtgc gggctgcggc tttgcttggg ccttccctgc
      661 ggcaggctgc gtcaccgcca tttccgcccg ctgggcgcga taatcggtcc atccgccggc
      721 atagacggtg gcacggccgt cgccttccat cgcgacggtc gtgtccgcca cacgatcgat
      781 gaaatcgcgg tcgtggctga ccagcagaac ggttccgtcg tagtctccca gcaggtcctg
      841 cagcaaatcc agcgtctcga catccagatc gttggtcggc tcgtcaagga ccagcaggtt
      901 cgagggccgc gccatcagcc gcgccagcaa aagccgcgcc ttctcgccgc ccgacaggct
      961 gcgcaccggc gcgcgggcct gcgcctcgtc gaacaggaaa tccttgagat agcccaccac
     1021 gtggcgaggc tggccgcgca ccatcacctg atcggcaccg cccgaggcgc ccagttcggg
     1081 atccgaggtc agcgattccc acaggctttg atcgggattc agcgccgcgc gggcctggtc
     1141 gaagaccgcc agatccaaat tggtgcccaa ggtcacggca ccctgatcgg gcgcgatctc
     1201 tttggtcagc atcttgatca gcgtggtctt tcccacaccg ttgggcccga caaaggcgat
     1261 gcgatcgccg cgattgacca gcagatcgaa cggcttcagg atcacgcgat cgtcatatgc
     1321 cttggcaatg ccccgggcct cgatcacctt tttgcccgat tgcgcgcccg gttccagcgc
     1381 catggccgcc gtgccctgcc gacggatccg ggcggcgcgt tcggcccgca gcgccgccag
     1441 ggcgcggacg cggccctgat tgcgcttgcg ccgggcgctg atgccttcca ccgcccagcg
     1501 ggcttccgcc ctgatcttgc ggtccagctt gtggcgcgcg tcgtcctcgg ccgaccagac
     1561 gctttcgcgc caatcctcga aatgcgcgaa gccgcgttcc tgacggcgca tctcgccccg
     1621 gtcgatccac aaggtcgccc gcgtcaggcg ccgcaggaaa gcgcggtcgt ggctgatcag
     1681 cacataggcg gcgcgggtct gggacaattg atcctccagc cagccgatcg cctcgatgtc
     1741 gaggtggttg gtcggttcgt cgagcagcat cagatcgggc gcctgcgcca g
//
LOCUS       DTVW01001295            1062 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_709196, whole
            genome shotgun sequence.
ACCESSION   DTVW01001295 DTVW01000000
VERSION     DTVW01001295.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1062)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1062)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1062
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_709196"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(74..>1062)
                     /locus_tag="EYO87_17235"
     CDS             complement(74..>1062)
                     /locus_tag="EYO87_17235"
                     /inference="COORDINATES: protein motif:HMM:PF00206.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="3-carboxy-cis,cis-muconate cycloisomerase"
                     /protein_id="HIC67701.1"
                     /translation="SQDIQDTGLVLQLRDALRIVEDRLADLEAVLHRKARDHAGLPIP
                     ARTRYQIAAPTTLGAKIAVWRAPLPRHRLRLDQLRPRLLNVSLHGAAGTGAALSPQMG
                     AVRAAMAEELGLGAPDVAWHATRDAICELGGWLALVTGTLGKMGADLILLGQSEISEV
                     AAGTGGASSTMPQKSNPVAAEALVALARLNAGAVGTLHQAMIHAQERDGSALAIEWQV
                     LPDMMIRTGAALRLALDLARSLTPRPDRIAATFAADRGAMLAEAAGFHLARQMPRGDA
                     LKIVAAALAELATDETETLAGALARLAPGHDWSRILAPEANTGDAAMQARLS"
BASE COUNT          151 a          390 c          358 g          163 t
ORIGIN      
        1 cccgcgccgg acatcgcggc cagcgtgaca ctggcgatca gcaaggtctt catgatctct
       61 cctccctttg gttctatgac agccgggcct gcatcgcggc atcgcccgta ttcgcctctg
      121 gcgcgaggat tcgcgaccag tcatggccgg gggccagccg cgccagcgcc cccgccaggg
      181 tttcggtctc gtcggtggcc agttctgcca gcgcagcggc gacgatcttc agcgcatcgc
      241 cgcgtggcat ctggcgggca agatgaaagc ccgccgcctc ggccagcatc gcgccgcgat
      301 cggccgcgaa ggtcgcggcg atccgatccg ggcgcggggt caggctgcgg gccaggtcca
      361 gggccagtcg caaggccgcg ccggtccgga tcatcatgtc gggcagcacc tgccattcga
      421 tcgccagcgc gctgccatcg cgttcctggg catggatcat cgcctgatgc agcgtgccca
      481 ccgcccccgc gttcagccgc gccagcgcca ccagcgcctc ggccgcgacc gggttggatt
      541 tctgcggcat ggtcgatgat gccccgcccg tgcccgccgc aacctcgctg atttccgatt
      601 gacccagcag gatcagatcg gcccccatct tgcccagcgt cccggtgacc agcgccagcc
      661 agccgcccag ttcgcagatc gcatcgcggg ttgcgtgcca ggccacatcc ggcgcgccca
      721 ggccaagttc ctcggccatg gcggcccgga ccgcccccat ctgcgggctc agcgcggcgc
      781 cggtgccggc ggcgccgtga agcgagacgt tcagaaggcg cggccgcaac tgatccagcc
      841 gcagccggtg tcggggcagg ggcgcgcgcc agacggcgat cttcgcgccc agggtggttg
      901 gcgcggcaat ctggtatcgc gtgcgtgcag ggatcggcag accggcatgg tcgcgcgcct
      961 ttcgatgcag gacggcctcc agatcggcca gccgatcctc gacaatccgc agggcatcgc
     1021 gcagttgcag caccagcccg gtatcctgga tatcctggga gg
//
LOCUS       DTVW01001296            1116 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_723409, whole
            genome shotgun sequence.
ACCESSION   DTVW01001296 DTVW01000000
VERSION     DTVW01001296.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1116)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1116)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1116
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_723409"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>1116
                     /locus_tag="EYO87_17240"
     CDS             <1..>1116
                     /locus_tag="EYO87_17240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014881007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="gamma-glutamyltransferase family protein"
                     /protein_id="HIC67702.1"
                     /translation="TPALLEEAHRRWGKANWRGLFGPAIDLAENGFDVSPRLASLVAE
                     EGEALQRFGATADYFFPGGTAIAAGDTLKNPAYAKTLRRIAADGSRAFYTGEIAQDIV
                     ATIRNAEGNPGVLSTEDLARYKVIERPAVCVEYRDNEVCGMGPPSSGGLTVGQILGAL
                     GGYDLAGLGADNPESWRLIGDASRLAFADRGRYMADSDFVPMPTEGLLDPDYLAGRGQ
                     LLSGDDALPEVSAGSPGWSHAWLWGQDSAIEFPSTSQISIVDGDGNALSMTTTIENGF
                     GSRLFTQGFLLNNELTDFSFETRDEAGYPIANRVEPGKRPRSSMSPSIVMKDGKPVLV
                     IGSPGGSRIIGYVAKAIIGYVDWGLDVQQAVALPNIV"
BASE COUNT          182 a          365 c          375 g          194 t
ORIGIN      
        1 gcacgccggc gctgctggaa gaggcgcatc gccgctgggg caaggccaat tggcgcgggc
       61 tgttcggtcc cgccatcgat ctggccgaga acggctttga cgtgtcgccg cgcctggcct
      121 cgctggtcgc cgaggaaggc gaggcgctgc aacgctttgg cgcgaccgcc gattacttct
      181 ttcccggcgg cactgccatc gcggccggcg ataccttgaa gaaccccgcc tatgccaaga
      241 ccctgcgccg catcgccgcc gacggcagcc gtgccttcta taccggcgaa atcgcacaag
      301 acatcgttgc cacgatccgc aacgccgagg gcaatccggg cgtcctgtcg accgaggatc
      361 tggcgcgcta caaggtgatc gaacgtcctg cggtctgcgt cgaataccgc gacaacgaag
      421 tctgcggcat gggcccccct tcgtcgggcg ggctgaccgt agggcagatt ctgggcgcgc
      481 ttggcggcta tgatctggcc ggcctggggg ccgacaaccc ggaaagctgg cggctgatcg
      541 gcgatgcctc gcgcctggcc ttcgccgatc gcggccgcta catggccgac agcgacttcg
      601 tgccgatgcc gaccgagggt ctgctggatc ccgattatct ggccgggcgc ggccagcttc
      661 tgtcgggcga cgacgcgctg cccgaggtca gcgccggatc gccgggctgg agccatgcct
      721 ggctctgggg gcaggacagc gcgatcgagt ttccctcgac ctctcagatc tcgatcgtgg
      781 acggggacgg caatgcgctg tcgatgacca ccacgatcga gaacggcttc ggttcgcgcc
      841 tgttcacgca gggcttcctg ctgaacaacg aattgaccga tttcagcttc gaaacccgtg
      901 acgaggcggg ttatccgatc gccaaccgcg tcgaaccggg caagcggccg cgttcgtcga
      961 tgtcacccag catcgtgatg aaggacggca agccggttct ggtcatcggc tcgcccggcg
     1021 gcagccggat catcggctac gtcgccaagg cgatcatcgg ttacgtcgat tggggtctgg
     1081 acgtgcagca ggcagtggcg ttgcccaata tcgtga
//
LOCUS       DTVW01001297            1613 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_727748, whole
            genome shotgun sequence.
ACCESSION   DTVW01001297 DTVW01000000
VERSION     DTVW01001297.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1613)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1613)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1613
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_727748"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..696)
                     /locus_tag="EYO87_17245"
     CDS             complement(<1..696)
                     /locus_tag="EYO87_17245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009827694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrodipicolinate synthase family protein"
                     /protein_id="HIC67703.1"
                     /translation="MTELIHRFSSGVFVIAATPFTEDGALDLVSTDRMIDFYLQTGVT
                     GLTILGIMGEAPKLTGAESRSFVQRVLSRVDGRVPVIVGVSGAGLDPMRALTAEAMEA
                     GAAGVMVAPMHGLGPEDRLEAYFAQVCKALGPDVPICLQDYPQTTAARFSVESILRIA
                     RQNPQVVMLKHEDWPGLTKLSRVRAETGTADQPRLSILTGNSALFLPQEMQRGADGAM
                     TGFAYPEMMVQVVE"
     gene            complement(693..1316)
                     /locus_tag="EYO87_17250"
     CDS             complement(693..1316)
                     /locus_tag="EYO87_17250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009814077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavin reductase family protein"
                     /protein_id="HIC67704.1"
                     /translation="MSLLDLTGLAPIDRYKLLTAVIVPRPVAWVTTQDRSGRVNAAPF
                     SFFNLFGQDPALVILGLENHRDGSGPKDTARNIADTGEFVVNIATPEFLQAMVGTAAA
                     YPADVSEPEVLGLGLARSMHVAPPRLSAAPAAVECRLRDTLRYSAERDIVVGEAVALA
                     ARDGLVDPERMHVDWGGVFPIARLFADRYARLEEIGRHAIPQPVDLK"
     gene            complement(1313..>1613)
                     /locus_tag="EYO87_17255"
     CDS             complement(1313..>1613)
                     /locus_tag="EYO87_17255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009814078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="N-carbamoyl-D-amino-acid hydrolase"
                     /protein_id="HIC67705.1"
                     /translation="LYHSELSMTAGAYQNATWVVGVAKAGDEDGHPLMGGSIIVDPNG
                     YVVERAGTTGDELLVHACDMDLSVFGKQTIFDFARHRRIEHYGLIASQTGMVVKV"
BASE COUNT          283 a          545 c          528 g          257 t
ORIGIN      
        1 ctccacgacc tgcaccatca tttccggata ggcaaacccg gtcatcgccc cgtcggcgcc
       61 gcgctgcatc tcctgcggca ggaacagcgc ggaattgccg gtcaggatcg acaggcgcgg
      121 ctgatccgcg gtgccggttt ccgcgcggac ccgcgacagc ttggtcaggc ccggccagtc
      181 ctcgtgcttc agcatcacca cctgcgggtt ctgccgcgcg atccgcagga tgctttcgac
      241 cgaaaagcgg gctgcggtgg tctgcgggta gtcctgcagg cagatcggga catcggggcc
      301 aagcgccttg cagacctggg cgaaatacgc ctccagccgg tcctcggggc ccaggccgtg
      361 catgggcgcg accatcacgc ccgcggcgcc ggcctccatc gcctctgccg tcaatgcgcg
      421 catcggatca agcccggcgc cagagacgcc gacgatcacc ggcacccggc catcgacacg
      481 cgacagcacg cgctgcacga agcttcgcga ttccgcgccg gtcagtttgg gcgcctcgcc
      541 catgatcccc aggatggtca gcccggtgac cccggtttgc agatagaagt cgatcatccg
      601 gtcggtcgag acgaggtcca gcgcaccgtc ctcggtgaag ggcgtcgcgg cgatcacgaa
      661 gaccccggat gagaagcggt ggataagttc tgtcatttca ggtccacggg ttgcggtatt
      721 gcgtgtcgcc cgatctcttc aagccgggca tagcggtcgg cgaacagccg ggcgatcggg
      781 aaaaccccgc cccagtcgac atgcatgcgc tccggatcga ccagcccgtc ccgcgccgcc
      841 agggccacgg cctcgcccac cacgatgtcg cgctcggccg aatagcgcag cgtatccctc
      901 agccggcatt cgaccgcggc cggcgctgcc gaaagacggg gcggcgcgac atgcatcgag
      961 cgggcaagac ccaggccaag gacttcgggc tcgctgacat ctgcgggata ggccgcggcg
     1021 gttccgacca tcgcctgcaa gaattcgggc gtcgcgatgt tgacgacgaa ctcgccggtg
     1081 tcggcgatgt tgcgcgcggt atccttgggg ccggaaccgt cgcgatggtt ctccagcccg
     1141 agaatgacaa gggccgggtc ctgcccgaaa aggttgaaga aggaaaacgg cgcggcattg
     1201 acccggccgg aacggtcctg tgtcgtcacc caggccaccg ggcgcgggac gatgaccgcc
     1261 gtcagcagct tgtagcggtc gatgggcgcc agcccggtga ggtccagaag gctcatacct
     1321 tcacaaccat tccggtctgg ctggcgatca ggccgtaatg ttcgatccgg cgatggcgcg
     1381 cgaagtcgaa gatcgtctgc ttgccgaaga cggacagatc catgtcgcag gcgtgaacca
     1441 gcaattcgtc gccggtggtg ccggcgcgtt ccacgacgta gccgttcgga tcgacgatga
     1501 tcgagccgcc catcagcggg tggccatctt cgtccccggc cttggcgacg ccgaccaccc
     1561 atgtcgcgtt ctgataggcg cccgccgtca tcgacaattc cgaatggtaa agc
//
LOCUS       DTVW01001298            1613 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_731895, whole
            genome shotgun sequence.
ACCESSION   DTVW01001298 DTVW01000000
VERSION     DTVW01001298.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1613)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1613)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1613
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_731895"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1613)
                     /locus_tag="EYO87_17260"
     CDS             complement(<1..>1613)
                     /locus_tag="EYO87_17260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008283087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HIC67706.1"
                     /translation="GVDFELIDAEECGRRHPLISTDNLLGGLWDPLDGDIDPAQLCQA
                     LARRARRAGAEVYRNTPVTGLTQHTDDSWTVHTEQGDIRCEIVVNACGYRVNEVGAMM
                     GVHHPVASMEHQYFLTEPIRAIEEAGHRMPLLRCPISDYYCRQEKNGLLVGFYEQDCK
                     TWGMDGIDPNFVNALCPDDLDRVMSVLEGAFARMPALMETGIHTVVNGPITYTIDGAP
                     LVGPIPGKRNAFCIIGLRAGLGEGGGHGWLLAQQIVHGEACYDTWGIDPRRFAGHGNV
                     ELTALKAIEDYQNEFRFHFPHEHRPAGRPIKTTPLTPVLAAEGADFGVVNGWERMAYI
                     KPGPDFEETYSFRFNETFDVIGDEVKAVQTGVGLTEVNGFNRIEITGPGARDWLDGMI
                     CGRIAGKVGKVGLGYLLNEHGHVKAEATLANLDEDTIWYGSAAASEFHDMDWLRTHLP
                     DDGSVSLRSLTNDWTILVLAGPKSRDVLSAVARGDWSARAFPWLSVRRAFVGIAPAVV
                     MSVSFSGELAYEIHVPNNQLHAAYLALRN"
BASE COUNT          294 a          526 c          509 g          284 t
ORIGIN      
        1 cgttgcgcag cgcgagatag gcggcatgaa gctgattgtt ggggacatga atctcgtagg
       61 ccagttcgcc cgagaagctg accgacatca ccaccgcagg ggcgatgccg acgaaggccc
      121 ggcgcacgga cagccacgga aacgcacggg ccgaccagtc gccgcgcgcg accgccgaca
      181 gcacgtcgcg cgatttcggg ccggccagaa caaggatggt ccagtcgttg gtcagcgagc
      241 gcagcgacac cgacccgtca tcgggcaaat gtgtccgcag ccagtccatg tcgtggaatt
      301 ccgacgcggc ggccgatccg taccagatcg tatcctcgtc cagattggcc agcgtcgcct
      361 cggcctttac atggccatgc tcgttcagca ggtagcccag cccgaccttg ccgacctttc
      421 cggcgatccg tccgcagatc atcccgtcca gccagtcgcg cgcgccggga ccggtgatct
      481 cgatccggtt gaagccgttg acctcggtca ggccgacgcc ggtctgaacc gccttcactt
      541 cgtcgccgat cacatcgaag gtttcgttga accggaaact gtaggtttcc tcgaaatccg
      601 ggccgggctt gatataggcc atgcgctccc agccgttgac gacgccgaaa tccgccccct
      661 cggcggccag aacgggggtc aggggcgtgg tcttgatcgg ccggccggcc gggcgatgtt
      721 cgtgcggaaa gtgaaagcgg aattcgttct ggtaatcctc gatcgccttc agggcggtca
      781 gttcgacatt gccatggccg gcaaagcgac gcgggtcgat gccccaggtg tcatagcagg
      841 cctcgccatg cacgatctgc tgcgccagca gccagccatg gccaccacct tcgcccaagc
      901 cggcgcgcaa gccgatgatg cagaacgcat tgcgtttccc cggaatgggt ccgaccaggg
      961 gtgcgccgtc gatcgtgtag gtgatcggtc cgttgacgac ggtatggatt cccgtctcca
     1021 tcagggccgg catccgcgca aaggcacctt ccagcacgct catcacccga tccagatcgt
     1081 cggggcaaag cgcgttgacg aaattcgggt cgatcccgtc catgccccag gtcttgcagt
     1141 cctgttcgta gaagccgacc agcaggccgt tcttttcctg gcggcagtaa taatcgctga
     1201 tcgggcagcg caacagcggc atacggtggc cggcctcctc gatggcccgg atcggctcgg
     1261 tcaggaaata ctggtgttcc atggaggcga cggggtgatg aacgcccatc atcgcgccga
     1321 cctcgttcac gcgatagccg caggcattga cgacgatttc gcagcggatg tcgccctgtt
     1381 cggtatggac ggtccaactg tcatcggtat gctgggtcag ccccgtcacc ggggtattgc
     1441 gataaacctc ggccccggcg cgacgggccc ggcgagccaa ggcctgacac agctgcgccg
     1501 ggtcgatatc gccgtccagc ggatcccaaa gaccgcccag caggttgtcg gtcgagatca
     1561 gcgggtgacg gcggccgcat tcctcggcgt cgatcagttc gaaatcgacg ccc
//
LOCUS       DTVW01001299            2603 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_741947, whole
            genome shotgun sequence.
ACCESSION   DTVW01001299 DTVW01000000
VERSION     DTVW01001299.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2603)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2603)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2603
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_741947"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            1..1188
                     /locus_tag="EYO87_17265"
     CDS             1..1188
                     /locus_tag="EYO87_17265"
                     /inference="COORDINATES: protein motif:HMM:PF13428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HIC67707.1"
                     /translation="MLMAGCAHIGAPGGSAFSRAAAAMGSARLIALPRELPDAVRLQA
                     SQHLLERVIGRPGSFYASGDLAQSAQFAASHADATGQGMVLATALSSRPDDMRRHPFL
                     RRIVALSALHAGDDALAARAARAAMADPRILPRDRKLCQQALDLIVARKAPDDPASAD
                     AFLGWLFSLKTSEAGLRDAFARLYIGRDCPVSRMLMIAPELAKSLAARDPAAGSAVAP
                     GWSYLCDWEELLKDEAARQGMRRWPELPQKMAFLDLRPGPPEAELKAGKAPPDPGPDR
                     AAWLGLAAAILSLHGRYARALRLLHWLDRVRPGDVLTRKRLADTCWRLGNVGAAEEFL
                     ADAIALCPDNPLLHLSMARRAAALGRAGQALDALERAEGIWPDRASLRWQGRVLRRKL
                     ADP"
     gene            1276..1599
                     /locus_tag="EYO87_17270"
     CDS             1276..1599
                     /locus_tag="EYO87_17270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007792048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster binding
                     domain-containing protein"
                     /protein_id="HIC67708.1"
                     /translation="MAKITYIEHNGTRHEVDVKTGMTVMEGARDNGIPGIDADCGGAC
                     ACSTCHVYVDPGWVDRLPAKDPMEEDMLDFAYEPDPDRSRLTCQLKVTDDLDGLVVQM
                     PEKQI"
BASE COUNT          394 a          887 c          910 g          412 t
ORIGIN      
        1 atgctgatgg ccggttgcgc gcatatcggc gcgccgggcg gcagcgcgtt ctcgcgcgcg
       61 gccgccgcga tgggcagcgc gcgcctgatc gccctgccca gggaattacc cgacgcggtt
      121 cgtctgcaag cctcccagca cctgctggaa cgggtgatcg gccggcccgg cagcttctat
      181 gccagcggcg atctggcgca atcggcgcaa ttcgccgcca gccacgccga tgcgacggga
      241 caggggatgg tgctggcgac ggcgctgtct tcgcggcccg acgacatgcg ccgccatccc
      301 ttcctgcgcc gtatcgtggc gctgagtgca ctgcacgcgg gcgatgacgc gctggccgca
      361 cgggcggcgc gcgcggccat ggccgatccc cgcatcctgc cgcgggacag aaagctgtgc
      421 caacaggcgc tggatctgat cgtcgcgcgc aaggcccccg acgatccggc cagtgccgat
      481 gccttcctgg gttggctgtt ttcgctgaaa accagtgaag ccgggctgcg tgatgctttc
      541 gcccggcttt atatcgggcg tgattgtccg gtctcgcgga tgctgatgat cgccccggaa
      601 cttgcgaaat cgctggctgc gcgggatccg gcggccggat ccgccgtcgc gcccggttgg
      661 tcctatctct gcgattggga ggaattgctg aaggacgagg cggcccggca ggggatgcgc
      721 cgctggccgg aactgccgca aaaaatggcc tttcttgatc tgcggccagg tccaccggaa
      781 gcggagctga aagccggcaa ggccccgcct gatccggggc cggatcgggc cgcatggctg
      841 ggcctggcgg cggcgatcct gtcgctgcac ggccgctatg cccgtgcttt gcggctgctg
      901 cactggctgg accgggtgcg gcccggcgat gtcctgaccc gcaagcggct ggccgatacc
      961 tgctggcggc tgggaaatgt cggggcggcc gaggaattcc tggccgacgc catcgccctt
     1021 tgccctgaca acccgctttt gcatctgtcg atggcgcggc gcgcggcagc cctgggccgt
     1081 gcggggcagg cactggacgc gctggaacga gccgagggaa tctggccgga ccgggccagc
     1141 ctgcgctggc aaggcagagt gctgcgccgc aaactggccg atccgtgacc gcaccttccg
     1201 cgtcgtgatc gcccgcccct tttcatcgcc cgcccaatgg cctatctggc ctcgcaaaga
     1261 caggggatcc cgcagatggc caagattacc tatatcgagc ataacggcac ccggcacgaa
     1321 gtcgatgtga agaccggaat gaccgtgatg gagggcgcgc gcgacaacgg catccccgga
     1381 atcgacgccg attgcggcgg cgcctgcgcc tgttcgacct gtcatgtcta tgtcgatccg
     1441 ggatgggtgg atcgactgcc ggccaaggat ccgatggaag aggacatgct ggatttcgcc
     1501 tatgagcccg atcccgaccg gtcgcgcctg acctgccagc tcaaggtgac cgacgatctg
     1561 gacgggcttg tggtgcagat gcccgaaaag cagatctgat ccctcagccg gtgtgatcgc
     1621 gcacccgcgc ggcgacgccc tgggcccagc gatcggcggc cgcgccgaag caatcgtgga
     1681 tcgaatccgc tgcgatcacg ctgcccatcg ccagccgacc cagcaggcag aggccgggct
     1741 gaacgctgcc atctcggccg atcagccgcc cgtccggcct gatccgcgcg ccaagcccct
     1801 tctcgatcgc tgtcacgcgg cctgaatcga tcagcccccg catcagagga tcgtccagcc
     1861 gtcccagatc gggcggcggc aggaccgcat cgaccatcgc cgcgacctcg gcggtggtat
     1921 catgttcgac cagccgccag ccggtgccgg tcatcacgat atcggggtcg tgggccgcgc
     1981 ggggatcgac cagaccgtcc tggatcagga tcagcaattc ctgggccgag gcgacgggcg
     2041 gcccgtagga gaagcgtttc agcccgtcat cgaagcccac gatggccgcc gccgtcgccg
     2101 gtgccgccgg gttgggattg aagccctgcc gcagggcgtt ctgccatttc cgcatgagct
     2161 ggccggtgac ataaccggcc gagggcggcg cgcgcccatg cgcctcgtcg atcgccgcgc
     2221 gcagcgccgt ggccgccggg cgatcctcct gcgagccggg tttttcgcgt tcggcagaca
     2281 gccatgcatt cagcgccccg gcatcggcgg caccgccggt gtcggacagg atccgcagga
     2341 cggggccgtg aatggcatcg cagatgatgg ccagagcctg gtccggacct tccgccatcg
     2401 cctgcgcgac ggccgcgcga aaggcgcggg tttcggtctc ggtcggctcg aaacgtgcat
     2461 cctgcgtggc atcggcgggc ttgggcgccg gcgcgtggcc gtccagcgaa aagggcagga
     2521 tgcgcgcggg ttcgcggcct gaccggtggt atcggccgtc ggcgaagcgt ccgcccaggc
     2581 ccagcgtcag cagccgcacc acg
//
LOCUS       DTVW01001300            1704 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_750170, whole
            genome shotgun sequence.
ACCESSION   DTVW01001300 DTVW01000000
VERSION     DTVW01001300.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1704)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1704)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1704
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_750170"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            155..1270
                     /locus_tag="EYO87_17275"
     CDS             155..1270
                     /locus_tag="EYO87_17275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014495005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH oxidase"
                     /protein_id="HIC67709.1"
                     /translation="MSHSNLELRSTVTSDGTLRITLDPVPVRAPEAGELLVRLEAAPI
                     NPSDLGLLYGPADMQTLTVEGSGEARALTAKIPQAAMAPLAARFDQSMPVGNEGAGLV
                     IEAGPDLGDMVGKRVAMIGGAMYAQLRLIRAESCIVLPEGATSAQGASLFVNPLTALG
                     FTETMRAEGHSAIVHAPGASNLGQMLVRICQEDGIGLVSIVRSRQQADLLREIGATHV
                     VDSSADDFRQQLEQAIAETGATIGFDAIGGGEMTSMMLNAMEAVAVRSMDSYNRYGSQ
                     SAKRVYIYGALDTGPTILKRGFGFAWNIGGWLLFNFLGNADPSVAARMRQRVVDGMKT
                     TFASHYTAEIGLDDLLKPEIAEATQRKATGEKYLVVP"
     gene            1448..>1704
                     /locus_tag="EYO87_17280"
     CDS             1448..>1704
                     /locus_tag="EYO87_17280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015921727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HIC67710.1"
                     /translation="MTQNNIAAPLAAALAERGYDTLTAVQQAVLNPDAKGRDLLVSAQ
                     TGSGKTVAFGIAAAPDLLDGADRLPEDSGPLALAIAPTRELA"
BASE COUNT          287 a          555 c          593 g          269 t
ORIGIN      
        1 cgccaccgag gacgaggact gggatttcta ggcgggcgac cggcggcagc cgaaccggac
       61 cggcgattgc cgtcggccgg cccaagcgcg ccgcctttca ccgccctgcc gccggtgcta
      121 ggctttcatt gccaggcatg caggcgagga catgatgagc cacagcaacc ttgaactcag
      181 atcgaccgtc acctccgacg gcaccctcag gatcacgctc gatcccgttc ccgtccgcgc
      241 gcccgaggcc ggcgaattgc tggtccgcct cgaggccgcg ccgatcaatc catccgatct
      301 tggcctgctc tatggcccgg ccgacatgca gaccctgacg gtcgagggct cgggcgaggc
      361 gcgcgcgctg accgcgaaaa ttccccaggc tgcgatggcg ccgctggcgg cacggttcga
      421 ccagtcgatg ccggtcggca acgagggcgc gggactggtg atcgaggccg gtcccgacct
      481 tggggatatg gtcggcaagc gcgtcgcgat gatcggcggg gcgatgtatg cgcagctgcg
      541 gctgatccgg gccgaatcct gcattgtgct gcccgagggt gcgacctccg cccaaggcgc
      601 ctcgttgttc gtcaatccgc tgaccgcact gggatttacc gagaccatgc gggccgaagg
      661 gcacagcgca atcgttcacg cgcccggcgc gtcgaatctg ggtcagatgc tggtgcgcat
      721 ctgccaggag gacgggatcg gtctggtcag catcgtgcgc agccggcagc aggcggatct
      781 gctgcgcgag atcggcgcca cacatgtggt ggacagcagc gccgatgatt tccggcagca
      841 actggaacag gcgattgccg agaccggggc cacgatcggc tttgacgcga tcgggggggg
      901 cgagatgacc agcatgatgc tgaacgcgat ggaggccgtc gcggtccggt ccatggacag
      961 ctacaaccgc tatggttcgc agtccgcgaa acgggtctat atctatggcg cgctggatac
     1021 cgggcccacg atcctcaagc gcggtttcgg ctttgcctgg aatatcggcg gctggcttct
     1081 gttcaacttt ctcggcaatg ccgatccctc ggtcgccgcg cggatgcgcc agcgtgtcgt
     1141 tgacgggatg aagaccacct ttgccagcca ctacacggcc gagatcggtc tggacgatct
     1201 gttgaagccc gagatcgccg aagccacgca gcgcaaggcg acgggcgaga aatacctggt
     1261 cgttccctga cggcgccgcc atggcggcgc ggacccggcc gaccgatgcc cgaaaccgga
     1321 accggctttg actctgcgct cgcgcgggga tagtcagccg gatcggctgt cctgcagcgc
     1381 gggcaggggg cccgggcaag ggtccgggcc gttccatcgg ccgcaagggc cctttcaggc
     1441 gaaacagatg acacagaaca atatcgcagc gccgctggcc gcggctctgg ccgagcgggg
     1501 ctatgacacc ctgacagcgg tgcagcaggc cgtgctgaac ccggatgcga agggacgcga
     1561 cctgctggtc tcggcgcaga ccggttcggg caagaccgtg gccttcggaa tcgccgcggc
     1621 gcccgatctg ctggatggcg cggacaggct gcccgaggat tccggtccgc tggcgctggc
     1681 catcgcgccg acgcgcgaac tggc
//
LOCUS       DTVW01001301            2341 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_773648, whole
            genome shotgun sequence.
ACCESSION   DTVW01001301 DTVW01000000
VERSION     DTVW01001301.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2341)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2341)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2341
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_773648"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..309)
                     /locus_tag="EYO87_17285"
     CDS             complement(<1..309)
                     /locus_tag="EYO87_17285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010397229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HIC67711.1"
                     /translation="MSVALITGAARRLGRSMALSLASRGHDVAIHYNRSEDEARDTAS
                     RARAFGVEARCFGADLLDPDAAADLIPRIAAAMGPLAVLVNNASIFRHDTIHSATMAG
                     W"
     gene            complement(306..1232)
                     /locus_tag="EYO87_17290"
     CDS             complement(306..1232)
                     /locus_tag="EYO87_17290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008031359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="calcium/sodium antiporter"
                     /protein_id="HIC67712.1"
                     /translation="MIVDIALVLGGLALLVLGGDLLVKGAVNLALRLGITPLVVGLTV
                     VAFGTSAPELIVSLSAALGGSTDIAMGNVVGSNIANVLVILGAAALISGIPTRGHDLR
                     ESWTMMIGASLLLIVLAFTGEIGRIEGAVLLIALILVLWRQLSAGSTEKAEDLEGVEP
                     GARWRRIVLWLVGGLIALPAGAHLLVGGAGDIARLFGISEAVIGLTLVAIGTSLPELS
                     ASVAAAMRGRADMALGNVVGSNLFNILAILGITALVKPLPVPAQMLQLDLWVMLAAAL
                     LMGPFLFRAIPIGRLVGAGFLAAYAAYVVILL"
     gene            complement(1338..2150)
                     /locus_tag="EYO87_17295"
     CDS             complement(1338..2150)
                     /locus_tag="EYO87_17295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S49 family peptidase"
                     /protein_id="HIC67713.1"
                     /translation="MHVPFLSRLIHRGPRVSVVRLHGAIGMAGRGGGGLNDAALAPVI
                     ERAFRKGKPVAVALSINSPGGSPVQSSLIAARIRRLSEETGTPVHAFVEDVAASGGYW
                     LACAGDRIWADDSSVLGSIGVISAGFGFHDLIDRWGIERRVHTAGQSKSTLDPFRPEK
                     PEDVARLHKVLEPIHAAFKAHVTARRGSKLADGRDLFTGEFWAGREAVDLGLADGIAH
                     LVPKMKALFGDKTRFSVHTPKQSLFRRLGLSAEAVFDAAAETAAFQRFGTGG"
BASE COUNT          449 a          826 c          755 g          311 t
ORIGIN      
        1 ccaacctgcc atcgtggcgc tgtggatggt gtcgtgccgg aatatcgagg cattgttgac
       61 cagcaccgca agcggcccca tcgcggccgc aatccgcgga atcagatcgg cggccgcgtc
      121 cggatccagc agatcggcgc cgaaacagcg cgcctcgacg ccgaaggcgc gggcccggga
      181 tgcggtgtca cgggcctcgt cttccgaacg gttgtagtgg atcgcgacat catggccgcg
      241 gcttgccagc gacagcgcca tggaacggcc cagacgccgc gcggcgccgg tgatcagcgc
      301 gacgctcata gcaggatcac gacatatgcg gcataggccg ccagaaagcc cgcgccgaca
      361 agcctgccga tcgggatggc gcggaacagg aacggtccca tcagcaaggc tgcggccagc
      421 atcacccaca gatcgagctg cagcatctgc gccggaaccg gcagcggctt caccagcgcg
      481 gtgattccga ggatcgcgag aatgttgaac aggttcgaac cgacgacatt gccaagcgcc
      541 atgtccgcgc gcccgcgcat cgccgcggcg accgaagccg acaattccgg cagcgaggtg
      601 ccgatggcaa ccagcgtcag gccgatcacc gcctcgctga tgccgaaaag ccgtgcgata
      661 tcgcccgcgc cgccgaccag cagatgcgcg cccgccggca gcgcgatcag cccgcccacc
      721 agccacagca cgatccggcg ccagcgcgcg cccggctcga cgccctccag atcttccgcc
      781 ttttcggtcg atcccgcgct gagctggcgc caaagcacca ggatcagcgc aatcagcagc
      841 acggccccct cgatccggcc gatctcgccg gtgaaggcca gcacgatcag caacagggac
      901 gcgccgatca tcatcgtcca gctttcgcgc agatcgtggc cgcgggtcgg aatgcccgag
      961 atcagcgccg ccgccccgag gatcaccagc acgttggcga tgttcgagcc cacgacattg
     1021 cccatcgcga tatcggtcga tccgccaagc gccgccgaga gcgacacgat cagttcgggg
     1081 gccgaggtgc cgaaggccac gacggtcagg cccacgacca gcggcgtgat ccccagccgc
     1141 agcgcaaggt tgaccgcccc cttgaccagc aggtcgccgc cgaggaccag cagtgccagc
     1201 ccgcccagaa ccagagcgat gtcaacgatc acgaggcttg atcccgagca acctgaacag
     1261 gaatttgcga aagcccggcc cgctgaccag cgccagcgcc accatgacca gcagaaacac
     1321 gatgaccagc ttgaccatca gccgccggtc ccgaaacgct ggaacgccgc cgtttccgcg
     1381 gccgcgtcga aaaccgcttc ggccgacagg cccaggcggc ggaacagcga ttgtttcggc
     1441 gtgtggacgg aaaagcgggt cttgtcgccg aacagcgcct tcatcttggg caccagatgc
     1501 gcgatcccgt cagccaggcc cagatcgacc gcctcgcgcc cggcccagaa ttcaccggtg
     1561 aacagatcgc gcccatcggc cagtttcgag ccgcgccgtg cggtgacatg ggccttgaac
     1621 gccgcgtgaa tcggctccag caccttgtgc agacgggcga catcctcggg cttttccggg
     1681 cggaacgggt ccagggtcga tttcgattgg cccgcggtgt gcacgcgacg ctcgatcccc
     1741 cagcggtcga tcagatcgtg aaagccgaac ccggcagaga tcacgccgat cgagccaagg
     1801 accgagctgt catcggccca gatccggtcg cccgcgcagg ccagccaata tccgcccgag
     1861 gccgcgacat cctcgacgaa ggcatggacc ggggttccgg tttcctccga cagacgccgg
     1921 atgcgcgcgg cgatcagcga tgattgcacc ggcgagccac cgggcgaatt gatggacagg
     1981 gccaccgcga ccggcttgcc cttgcgaaag gcgcgttcga tcaccggggc aagcgccgcg
     2041 tcgttcaggc cgccgccgcc gcgcccggcc atgccgatgg cgccgtgcag gcgaacgacc
     2101 gaaacgcgcg gtccgcgatg gatcaggcgg ctgagaaacg gaacatgcat gaggcccgac
     2161 ataatggcgc cgcgttcccg ccacaagcgg caggatcagg acagcgtgtc gcggatggtc
     2221 tggccgggca tgaaggtcgg gaccatctcg acgatgcggt tttcgggcag ggcatccttg
     2281 ccggcgacca gcctggcggc gcggcgcccg atttcgaccc gtctcgcatc ggtcgtggtc
     2341 a
//
LOCUS       DTVW01001302            1667 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_774855, whole
            genome shotgun sequence.
ACCESSION   DTVW01001302 DTVW01000000
VERSION     DTVW01001302.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1667)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1667)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1667
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_774855"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..874
                     /locus_tag="EYO87_17300"
     CDS             <1..874
                     /locus_tag="EYO87_17300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011540015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DSD1 family PLP-dependent enzyme"
                     /protein_id="HIC67714.1"
                     /translation="IEDVLVSNQVRDPKKIDRLARLPKHGSRIIVCVDDVANVADLSA
                     AAQKHGTQLEVFVEIDCGAGRCGVKTADAVVEIARAVDAAPGLKFTGIQAYQGAMQHL
                     DSYDDRKAKLDAAIAQVRDAVDALKAEGLEPELVSGGGTGSYYFESNSGVYNELQCGS
                     YAFMDADYGRIHDKDGKRIDQGEWENALFILTSVMSHAKPDKAICDAGLKAQSVDSGL
                     PFIYGRDDVKYVKCSDEHGVIEDPDGALKVNDKLRLVPGHCDPTCNVHDWYVGVRNGK
                     VETLWPVSARGKAY"
     gene            874..>1667
                     /locus_tag="EYO87_17305"
     CDS             874..>1667
                     /locus_tag="EYO87_17305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019294510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine cyclodeaminase family protein"
                     /protein_id="HIC67715.1"
                     /translation="MWVVPEKEIAGLMTPEAAFEAVEAVFAAMARGDASNFPVVREAI
                     GYEDALYGFKGGFDRAALNLGLKAGGYWPNNQKHGIINHQSTVFLFDPDTGRVAAAVG
                     GNLLTALRTAAASAVSIRHLAPKDARVLGMIGAGHQSAFQMRSAVQAADFTSVIGWNP
                     HPQMLTRLADTAAELGLPFEAVDLGRLGAEADVIISITSAFEPLLMDAHVKGPTHIAA
                     MGTDTRGKQELDPALVRRARLFTDEVAQSLSIGEFQHAAAQNMISA"
BASE COUNT          321 a          512 c          563 g          271 t
ORIGIN      
        1 catcgaggac gtgctggtca gcaaccaggt ccgcgacccg aagaagatcg accgactggc
       61 gcgtttgccc aagcatggca gccggatcat cgtctgcgtg gacgacgtgg caaacgtggc
      121 cgacctgtcg gcggcggcgc agaagcacgg cacgcaactg gaagtctttg tcgagatcga
      181 ttgcggcgcc ggccgctgcg gggtcaagac cgccgacgca gtggtcgaga tcgcgcgcgc
      241 cgtcgatgcc gcgccgggac tgaaattcac cggcatccag gcctatcagg gcgcgatgca
      301 gcatctggac agctatgacg accgcaaggc gaaactggac gctgccatcg cgcaggtgcg
      361 ggacgccgtc gatgcgctga aggccgaggg tctggaaccc gagctggtct cgggcggcgg
      421 caccggcagc tactatttcg aaagcaattc gggcgtctac aatgagttgc aatgcggcag
      481 ctacgccttc atggatgccg attacggacg tatccacgac aaggacggca agcgcatcga
      541 ccagggcgaa tgggaaaacg cgctgttcat cctgaccagc gtgatgagcc acgccaagcc
      601 cgacaaggcc atctgcgatg ccggcctgaa ggcgcagtcg gtcgatagcg ggctgccctt
      661 catctatggc cgcgatgacg tgaaatacgt caaatgcagc gacgaacatg gcgtgatcga
      721 ggatccggac ggcgcgctga aagtgaatga caagctgcga ctggtgccgg gccattgcga
      781 tccgacctgc aacgtccatg actggtatgt cggtgtccgc aacggcaagg tcgaaacgct
      841 gtggccggtc agcgcgcgcg ggaaggccta ttgatgtggg tcgttcctga aaaggaaatc
      901 gccggcctga tgacgcccga ggcggcgttc gaggcggtcg aggcggtctt cgcggccatg
      961 gcgcgcggag atgccagcaa ctttccggtc gtgcgcgagg cgatcggcta cgaggatgcg
     1021 ctgtatggct tcaagggcgg cttcgacagg gcggcgctga accttggact gaaggccggc
     1081 ggctactggc ccaacaacca gaagcacggg atcatcaacc accagtccac ggtatttctc
     1141 ttcgacccgg ataccggacg ggtcgcggcg gcggtgggcg gcaacctgct gaccgccttg
     1201 cgcacagccg cggccagcgc cgtgtcgatc aggcatctgg cgccgaagga tgcccgcgtg
     1261 ctgggcatga tcggtgcggg ccatcaatct gcgttccaga tgaggtccgc cgtgcaggcc
     1321 gccgatttca ccagcgtgat cggctggaac ccgcatcccc agatgctgac acggctggcc
     1381 gataccgcgg ccgaactggg tctgcccttc gaggcggtcg atctgggccg gctgggggcc
     1441 gaggcggatg tcatcatctc gatcacctcg gccttcgagc cgctgctgat ggacgcccat
     1501 gtgaagggcc cgacccatat cgccgcgatg ggcaccgata cgcgcggcaa gcaggaactg
     1561 gacccggccc tcgtccgtcg tgcgcggctt ttcaccgatg aggttgccca atccctcagc
     1621 atcggcgaat tccagcacgc cgcggcacag aatatgattt ccgccag
//
LOCUS       DTVW01001303            1583 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_777, whole genome
            shotgun sequence.
ACCESSION   DTVW01001303 DTVW01000000
VERSION     DTVW01001303.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1583)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1583)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1583
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_777"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1047
                     /locus_tag="EYO87_17310"
     CDS             <1..1047
                     /locus_tag="EYO87_17310"
                     /inference="COORDINATES: protein motif:HMM:PF09898.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2125 domain-containing protein"
                     /protein_id="HIC67716.1"
                     /translation="TYDLSAAGVDIALSAKEPVQQDGSGGTGQIDASGNVTDLTASGW
                     MQMPSDAPSEPQALNSALASGMALDGTLTMGRVSGEFVFSGQDEDGQPQDGKASYAAG
                     PSSMAFSMSKDGLGYEGSGKNSAVEMTLGSLPFPITYAVAETSAKMMLPVTASDQPQP
                     FTLAYSLSGLTMGDAIWGLFDPQAKLPRDPASLTVDLSGNALVGRDLLDPALAEKMQR
                     EQDPAASGDLAAGNPADQPAGPDMPFAPQDLTINRIALDAVGAKADLTGQLAFGDTPN
                     EPVGKIQGSFTGLNTLLETLSAMGLLPQEQLMATRMMLAMFARPSDSDPETMTTEIEF
                     REGGSIFANGQQVK"
     gene            1281..>1583
                     /locus_tag="EYO87_17315"
     CDS             1281..>1583
                     /locus_tag="EYO87_17315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010140596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TldD/PmbA family protein"
                     /protein_id="HIC67717.1"
                     /translation="MSSTTPRLQDLAQRLIQAATAAGADQADALALSGQSVSIDVRAG
                     GLEHADRAEGVEIGLRVLIGGRQACVSGSDHTDAAIAQMADRAVAMAREAPVDDHLG"
BASE COUNT          272 a          521 c          555 g          235 t
ORIGIN      
        1 acctatgatc tcagcgccgc cggcgtggac atcgccctca gcgcgaaaga gcctgtgcag
       61 caggacggct cgggcgggac cggacagatc gacgccagcg gcaatgtcac ggatctgacc
      121 gcaagcggct ggatgcagat gccgtcggac gcgccctcgg aacctcaggc gctgaacagc
      181 gcgctggcat ccgggatggc gctggacgga accctgacga tgggaagggt ttcgggcgag
      241 ttcgtctttt ccggtcagga cgaggacggc cagccgcaag acggcaaggc cagctatgcc
      301 gccggcccca gcagcatggc gttctcgatg tcgaaggacg ggctgggcta tgaaggctcg
      361 ggcaagaaca gcgcggtcga gatgaccctc ggctcgcttc ccttcccgat cacctatgcc
      421 gtcgccgaga cctcggccaa gatgatgctg ccggtgaccg cttcggacca gccgcagccc
      481 ttcacgcttg cctacagcct cagcgggctg acgatgggcg atgcgatctg gggcctgttc
      541 gatccgcagg ccaagctgcc ccgcgacccg gccagtctga ccgtggatct gtcgggcaat
      601 gcgctggtcg gcagggacct gctggatccg gcgctggccg agaagatgca gcgcgaacag
      661 gatcctgcgg ccagtggcga tctcgccgcc gggaacccgg ccgatcagcc cgcaggcccc
      721 gacatgccct tcgcgccgca ggatctgacg atcaacagga ttgcgctgga tgcggtgggg
      781 gccaaggccg atctgaccgg ccagcttgcc ttcggcgata cgcccaacga gccggtcggc
      841 aagatccagg gcagcttcac gggcctgaac accctgctgg agacattgtc ggccatgggt
      901 ctgctgccgc aggaacagct gatggcgacg cggatgatgc tggccatgtt cgctcgcccc
      961 tcggacagcg atcccgagac gatgacgacc gagatcgaat tccgcgaggg cgggtcgatc
     1021 tttgccaatg gccagcaggt gaaataggcc gcaaggcaag ccgggtcggg gcagggttgt
     1081 cccgaccgtc tcgcgccatg gcgcgcatca ccgaccgcgc atcgacgccc gcccggaatc
     1141 gggatgcggc aggctggccg ggccgcgccc gctggcgtcc gtgccccggt ttcgcggcgc
     1201 agtccggccg cggatcaccc ttttcatttg cgcatcgctt cgggtcgcgg gaaaagagga
     1261 cgccgaacaa cgaggacttc atgagcagca caaccccccg attgcaggat ctggcccaac
     1321 ggctgatcca ggccgcgacg gcggcaggcg cggatcaggc cgatgcgctg gcgctttcgg
     1381 gccagtcggt cagcatcgac gtgcgcgcgg gcgggctgga acatgccgac cgcgccgaag
     1441 gggtcgagat cggcctgcgc gtcctgatcg gcgggcggca ggcctgcgtc tcgggttcgg
     1501 accatacgga tgcggcgatc gcacagatgg ccgaccgcgc cgtcgccatg gcccgcgaag
     1561 cgccggtcga tgatcatctg ggg
//
LOCUS       DTVW01001304            1074 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_781931, whole
            genome shotgun sequence.
ACCESSION   DTVW01001304 DTVW01000000
VERSION     DTVW01001304.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1074)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1074)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1074
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_781931"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
BASE COUNT          192 a          377 c          387 g          118 t
ORIGIN      
        1 cagggcatcg acccgggtct ggccgttata ggtgaggttg aagatcgcga tggcgaaggc
       61 gaaggaaaag gcaagcgata ccagcgcgat cccgcccgca agccgccggt tctgccgcga
      121 caggctggcg gcgatgctgg gcgccgtgcc cgaggccaga ccgctgcggc cgatcatcgt
      181 cgccaggccg cccgaagacc ggccgatcag ccacgaggtc agccggatcg tcagcagcac
      241 cgccccggtc cagaacagca gcggcgacag gaaggcggtg taatcgacgg cggtggccgt
      301 gaccccttcc ggagccagca cgacctggta gttggagctt gccgatcgca ggaagatgac
      361 ggcggcggcg gccaggcaga tcacgtccag ccacagccgc tgccacagcg gcaccttgcc
      421 cctggtgaaa tagctccggc cgccgacgat ggtctggtcg cgcaagcggg acagggcggg
      481 cagcagaccg cagagaaggg cgatcgcgaa accgccgagc ccggccagac cgatccaggc
      541 cagggcggca ggcgccagcg ccgcgccgcc gaactggacg accgccagcg ccagggcggc
      601 cagcgcgccg aagacagcgg ccccgaccgc gccgatcgtt tcttcagacg cgacgagccg
      661 caggatcgac ccccggtcca gtccgcgcat ccgcagcagc gcctcgctgc ggcccttgct
      721 ttcacggtcc gccgacaaca gcgacacggt cagcaggatc gccagcatcg ccgccggcag
      781 gccgaggaac aggaagatga cgcgggcata gatcgcgtcg ccccgcaccg catccagccg
      841 cgcgcccaga ttgtcgccga ccagcgcggc gcccgcgatc ccggcctcga aattgcgggc
      901 gctgcgggcc tcctggatat aggcctgatc gggctggcgg ggcagcgcgg catgggtgaa
      961 cccggcatgg aactgcgtgg tcgtccgggc cggatcggcc gcgaacaggc tggtccactg
     1021 agccatcggc aggatgacga cgttgtcggg cggggcggtc ggcccggccc cggc
//
LOCUS       DTVW01001305            3387 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_785762, whole
            genome shotgun sequence.
ACCESSION   DTVW01001305 DTVW01000000
VERSION     DTVW01001305.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3387)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3387)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3387
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_785762"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..698
                     /locus_tag="EYO87_17320"
     CDS             <1..698
                     /locus_tag="EYO87_17320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004431056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="xylose isomerase"
                     /protein_id="HIC67718.1"
                     /translation="DVMNTVAPEDIKAAAEAAGVTILSINALYPFNVWSGDLPARAEK
                     MADYAAACGAKALVMCPLNDGTKVSRNDLVEALKNMAPILRERGLTGLVEPLGFPISS
                     MRSKAEAIAAIEAADGADVYKLMHDTFHHHLAGETEFFPEWTGLVHISGVTDPDVTVD
                     DMLDAHRVLVDGKDRLENIPQLKALLAAGYDGPISFEPFAEEVHALDDPEAALRESIG
                     FVSAGVKETASAQ"
     gene            777..2690
                     /gene="iolC"
                     /locus_tag="EYO87_17325"
                     /pseudo
     CDS             777..2690
                     /gene="iolC"
                     /locus_tag="EYO87_17325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018237071.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="5-dehydro-2-deoxygluconokinase"
     gene            2687..>3387
                     /locus_tag="EYO87_17330"
     CDS             2687..>3387
                     /locus_tag="EYO87_17330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007421522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3D-(3,5/4)-trihydroxycyclohexane-1,2-dione
                     acylhydrolase (decyclizing)"
                     /protein_id="HIC67719.1"
                     /translation="MTSTIKLTAAQAMVKWLSVQMTDDGERFIEGVWAIFGHGNVAGV
                     GEALHRFREVIPTWRGQNEQTMAHAAIAYAKTKRRRKAMAITSSIGPGSTNMVTACGL
                     AHVNRLPVLMICGDVFANRRPDPVLQQIEDFDDGTVSANDCFRPVARYFDRISRPEHL
                     LTALPRAMAMMTDPQNCGPAVLAFCQDVQAEEFDYPEDFFTPRTWRIRRPEPDPREVA
                     DVARMIAEAECPVIVS"
BASE COUNT          595 a         1101 c         1129 g          562 t
ORIGIN      
        1 ccgacgtgat gaacacggtg gcgcccgagg acatcaaggc ggcggccgag gcggcgggcg
       61 tcacgatcct gtcgatcaac gcgctctatc ccttcaacgt ctggtccggc gatctgccgg
      121 cccgggccga gaagatggcc gactatgccg cagcttgcgg cgccaaggcg ctggtgatgt
      181 gcccgctgaa cgatggcacg aaggtgtcgc gcaatgacct ggtcgaggcg ctgaagaaca
      241 tggcgcccat cctgcgtgag cggggcctga ccggccttgt cgagcctctg ggcttcccga
      301 tctcgtccat gcgctccaag gccgaggcca tcgcggccat cgaggcggcg gacggcgcgg
      361 acgtctacaa gctgatgcac gacaccttcc accatcacct cgcgggcgaa accgagttct
      421 tccccgaatg gaccggactc gtacacatct cgggcgtgac cgacccggac gtgaccgtgg
      481 acgacatgct ggacgcgcat cgcgtgctgg tcgatggcaa ggatcggctg gagaacatcc
      541 cgcagctcaa ggcccttttg gccgccggtt acgacggccc gatctccttc gagcccttcg
      601 ccgaggaggt tcacgccctt gacgatcccg aagcggcgtt gcgcgaaagc atcggtttcg
      661 tgtccgcggg ggtaaaggaa accgcgtcgg ctcagtgatc ggtgcggaca ggccgggcga
      721 tatcctcctc ccaatatcgc ccggccaccc gatagacgaa tgaaggaaat gcggacatga
      781 agacccttga cgtcatcaca atcggccgat cctcggtcga tctctacggc gaccagatcg
      841 gcggacggct cgaggatatg gggtcgtttt ccaagtatat cggcggctcg cccaccaaca
      901 tcgcctgcgg gacggcgcgg ctgggcctta agtcggccgt cgtcactggc gtcggcgacg
      961 agcacatggg ccgcttcata atcgaacagc tggcccgcga gggcgtgaac accgatggcg
     1021 tgaaggtcga tcccgacagg ctgacggcgc ttgtccttct gggcatccgc gaccaggagc
     1081 ggttcccgtt gatcttctac cggtctgact gcgccgatat gggcctgacc gaggacgaca
     1141 tcgatgacag tttcattcgc agcgcccgcg cggtggtggc gaccggcacc cacctttcgc
     1201 atcccaaggt ggaggcagca acgctcaagg ctctgaagat cgctcgtgag gcctggctgc
     1261 agaccgcgct cgacatcgac taccgaccga acctctgggg tgtcgccggt cacggcgaag
     1321 gcgagagccg cttcgtcgaa agcgcggcgg tcacggccaa actgcaggaa agcctgcatt
     1381 acttcgacct gatcgtcggc acggaggagg aattccacat cgccggcggc tcgaccgaca
     1441 cgattcaagc gctgcgcgcg gtgcgcaagg tctcgggcgc gacgctcgtc tgcaagcgcg
     1501 gcccgatggg ggcgtcggcc ttcgagggcg ccattccgga cagcctcgac gagggccaga
     1561 ccgggccggg cttccccatc gaggtcttca acgtgctggg cgccagggac ggcttcatgt
     1621 cgggccttct gaagggctgg ctcgatggcg aggactggcc gaccgcgctc aaatacgcaa
     1681 atgcctgcgg cgccttcgcc gtctcgcgtc atggctgcac cccggcctat ccgtcgtggg
     1741 aggagcttca gttcttcttc gagcgcggca tcgtgcgccc cgacttgcga aatgatgttg
     1801 acctcgaaca ggtccactgg gccacgaacc gcgcgggcga ctggacctcg gtcaagacct
     1861 tcgccttcga ccaccgggtg cagctcgagg agatggaggg atacaccctg gagaaaggat
     1921 cggcattcaa ggagctgtgc cttgatgcgg cgctgcgggt gcaagacggg cgacccggct
     1981 tcggcatcct ttgcgacaac cgcatcggcc gctcggcctt gcacaaggcg tcgggcaccg
     2041 ggctctggat cggcaggccg acggagcttc cggggtcccg tcccatcgag ttcgagccgt
     2101 agctggggga cgatctcggc ggcctgcgcg aatgggccaa ggagaatgtc gtgaagcttc
     2161 tggtgttctg ccacccggac gacgccgaaa agacggcggg catgcaagtc gcacgggtca
     2221 agcggctctt cacggccgcg cggcgcaaca accttgaatt cctgctcgag atcatcccgt
     2281 cgaaggtcgg gccggtcgac gacgagacct cggcgacgct gatccagacg ttctatgacg
     2341 cgggggttta tcccgactgg tggaagctcg agccgttcag gaccaggtcc gcctggcaca
     2401 acgccgtcga cgcgatcgag cgcaacgacc cgcgcacgcg cggcatcgtg gtgctgggcc
     2461 tcgacgcgcc cgaggccgag ctggccgaaa gcttccggct cgcggcttcg ttcccgctgg
     2521 tccggggctt tgccgtcggc aggaccgtct tcggtcaggt tgcccgcgac tggatggcgg
     2581 gccggatcgc cgacgccgac gccgtcgcga ccatggccga caattacacg cggctttgcc
     2641 gcatctggga caacgcccgc gcaggcgcga aggaggaggt ggtcgcatga ccagcacgat
     2701 caagctcacg gccgcacagg ccatggtgaa atggctctcg gttcagatga cggacgatgg
     2761 cgaaagattc atcgagggcg tttgggcgat cttcggacac ggcaatgtcg cgggggtcgg
     2821 cgaggcgctg catcgcttcc gggaagtcat tccgacgtgg cgcggccaga acgagcagac
     2881 catggcccat gccgccatcg cctatgcgaa gaccaaacga cggcggaagg cgatggccat
     2941 cacctcctcc atcgggccgg gttcgaccaa catggtcacc gcctgcgggc tagcgcatgt
     3001 gaaccgactg ccggtcctca tgatctgcgg cgatgtcttc gccaaccggc gccccgaccc
     3061 ggtgctgcag cagatcgagg atttcgacga cggcacggtc tcggcgaacg actgcttccg
     3121 cccggtcgcg cgctatttcg atcgcatctc gcggcccgaa catcttctga ccgcgctgcc
     3181 gcgcgcgatg gcgatgatga ccgatccgca gaattgcggc cctgccgtgc tcgccttctg
     3241 ccaggacgtg caggccgagg aattcgacta cccagaggac ttcttcacgc cgcgcacatg
     3301 gcgaattcgg cggccggaac ccgatccgcg cgaggtggcc gacgtcgccc ggatgatcgc
     3361 cgaggccgag tgcccggtga tcgtgtc
//
LOCUS       DTVW01001306            2786 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_790137, whole
            genome shotgun sequence.
ACCESSION   DTVW01001306 DTVW01000000
VERSION     DTVW01001306.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2786)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2786)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2786
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_790137"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..426)
                     /locus_tag="EYO87_17335"
     CDS             complement(<1..426)
                     /locus_tag="EYO87_17335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HIC67720.1"
                     /translation="MRIPEPQISFSTPTLQRLLPMHLLMAPDGEILGTGPTLRKVLGR
                     KCRKIGEVLTQARATTGQSLIDEIATAATRGERLFLRLTEPPHLTLRGHAVAAAGSET
                     AILINLGFGIGLTDAVSHAGLTDQDFAPAELAMELLFLHE"
     gene            complement(426..995)
                     /locus_tag="EYO87_17340"
     CDS             complement(426..995)
                     /locus_tag="EYO87_17340"
                     /inference="COORDINATES: protein motif:HMM:PF07700.13"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme NO-binding protein"
                     /protein_id="HIC67721.1"
                     /translation="MQTLLDRAIGEFMREVYGIERWQDILDQMSQGLIDTGPDGAGYA
                     GAMREAARRLAKPEADLFEDLGAWLARHEPIRRLLRFSGSNFRDFVMRLDELPDRAHM
                     VVPELRMPSILIRQDDSNTVTIELTEAQAGWSPVLGGILRGMADDYGALGLILVEGDV
                     ITVRISDESFSEDRGFQLGDPYHAATASR"
     gene            complement(1058..1348)
                     /locus_tag="EYO87_17345"
     CDS             complement(1058..1348)
                     /locus_tag="EYO87_17345"
                     /inference="COORDINATES: protein motif:HMM:PF12096.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3572 family protein"
                     /protein_id="HIC67722.1"
                     /translation="MAYSPEQARELALSALIWMTEDPDLIQGFLGATGLRPEDLRAMA
                     SDADLAVHVLDFVLQADERVLRVAQALQIKPEEVMTARTILAGPGSHGWSID"
     gene            1466..>2786
                     /locus_tag="EYO87_17350"
     CDS             1466..>2786
                     /locus_tag="EYO87_17350"
                     /inference="COORDINATES: protein
                     motif:HMM:PF00072.22,HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HIC67723.1"
                     /translation="MTARIIVADGTATTRIMMKVRLGSACHGVLTAASSAQLLQHLRE
                     GKPDLVLLASGFPDCALVDLCGLIHVEYPEVTILAIADAQVRIEALRAGAAAVLDPAA
                     DEQILLARIRGLLRDAEDVAEQVGAMREAAAPFRHAREDRVTLVADNPGRALRWRHGL
                     QSRLHCQFRINNPEEALSLAVTGEGADLYLIAADIEGRGDGLRLLSELRSRHGSRHAA
                     FIVATLPERSELSAIALDLGAGEVLPMDLGSGSNPEMAALAVEGQLHRKRDADRRRAE
                     TQRNMVWAMTDPLTGLHNRRFALPRLAAMAGDAIRQRRPFAVLALDLDRFKTINDRFG
                     HPAGDAVLRDVAARIAASVPEAGMTARLGGEEFMIVLPETDEAGACDMAETIRRRIEA
                     DGIVLPQLSGGGRVRVTVSVGAAVAHPPTVDMRAETLAELSMERADRA"
BASE COUNT          488 a          911 c          899 g          488 t
ORIGIN      
        1 ctcgtgcagg aacagcagct ccatcgccag ttccgccggc gcgaaatcct gatccgtcaa
       61 tccggcatgg ctgaccgcgt cggtcagtcc gataccgaag cccagattga tcaaaatcgc
      121 ggtttcggac cccgccgcgg ctactgcatg acccctgagg gtcaggtgcg gcggctcggt
      181 cagacgcagg aaaagccgtt cgccccgcgt ggcggccgtc gcgatttcgt cgatcagcga
      241 ctgcccggtc gttgcgcgcg cctgggtcag aacctcgccg atcttccggc atttccggcc
      301 cagaaccttg cgcagggtcg gcccggtccc caggatttcg ccatccggtg ccatcagcag
      361 atgcatcggc aagagccgct gaagcgtcgg cgtcgagaag ctgatctgcg gttcggggat
      421 ccgcatcagc gggacgccgt cgcggcgtga tagggatcgc cgagttgaaa gccgcgatct
      481 tccgaaaagg attcgtccga gatgcggacc gtgatgacat cgccctcgac cagaatcagc
      541 ccaagcgcgc cataatcatc cgccatcccg cgcaggatac cgcccagcac tggtgaccag
      601 cccgcctgag cctcggtcag ttcgatcgtc accgtattgg aatcgtcttg ccggatcagg
      661 atcgacggca ttcgcagttc cggcacgacc atatgggcgc ggtccggcaa ttcgtccagc
      721 cgcatcacga aatcgcggaa gttgctgccc gaaaagcgga gcaatcggcg gatcggttcg
      781 tgccgcgcca gccatgcgcc cagatcttcg aacagatccg cttcgggctt ggccagcctg
      841 cgggcggcct cgcgcatcgc gccggcatag ccggcgccat caggtccggt atcgatcagc
      901 ccctgcgaca tctgatccag aatgtcctgc caacgctcga tcccatagac ctcacgcatg
      961 aattcgccga tggcgcgatc gagcaatgtc tgcatctctc accttccttt tggcgtaagc
     1021 ctagcgccga aaagtgaaga aaccggtaag accggggcta atcgatgctc cagccgtgac
     1081 tgccggggcc ggccaggatg gtgcgggcgg tcatcacctc ttccggcttg atctgaagcg
     1141 cctgcgccac ccgcagcacg cgttcatccg cctgcagcac aaaatcaaga acatggaccg
     1201 ccaaatccgc gtcgctggcc atggcgcgaa gatcctcggg cctcagcccc gtcgcgccga
     1261 gaaagccctg aatcaggtca ggatcttccg tcatccagat cagcgccgac aacgccagct
     1321 cgcgtgcctg ttcgggcgaa taggccatgg gtcacccctg cgtgagtttt gcgcggattt
     1381 ccgccggctc cgaatagcgg aaacactttg ttaaggaaat cctgtgattc ttcgccgaaa
     1441 cgggcaggaa ggggtctgaa ggctgatgac ggctcgcatc atcgttgctg acggaacggc
     1501 cacgacgcgc atcatgatga aggtgcggtt ggggtcggcg tgccatggcg tgctgaccgc
     1561 ggcaagcagc gcccagcttt tgcagcacct tcgcgagggc aagcccgacc tggtgcttct
     1621 ggcctcgggt tttcccgatt gcgcgctggt cgatctgtgc ggactgatcc acgtcgaata
     1681 tcccgaagtg acgatccttg cgatagccga tgcgcaggtg cgaatcgagg ctttacgggc
     1741 aggtgcggcg gctgtcctgg atcccgccgc ggacgaacag atcttgctgg cgcgcattcg
     1801 cggtctgctg cgcgatgccg aagatgtagc cgaacaggtc ggcgcgatgc gcgaggccgc
     1861 cgcaccgttc cgccatgccc gcgaagatcg cgtcacgctg gttgccgaca accccggccg
     1921 cgccctgcgc tggcgccatg gcctgcaatc gcggctgcat tgccagttcc gcataaacaa
     1981 tcccgaagag gcgctgagcc ttgccgtgac cggcgaaggt gccgatcttt atctgatcgc
     2041 cgccgatatc gaggggcgcg gtgacggttt gcggctgctg tcggaactgc gctcgcgcca
     2101 cggctcgcgc catgcggcct ttatcgtggc caccttgccc gaacgcagcg agttgtcagc
     2161 cattgcgctg gatttgggcg cgggcgaggt tctgccgatg gatctgggca gcggcagcaa
     2221 tcccgaaatg gcggcgctgg cggtcgaggg ccagttgcac cgcaagcgcg acgccgaccg
     2281 ccgccgggcg gaaacgcagc gcaatatggt ctgggccatg accgatccgc tgaccggcct
     2341 gcacaaccgg cgcttcgccc tgccccggct ggcggcgatg gccggcgatg cgatccggca
     2401 gcgtcggccc ttcgcggtgc tggcgctgga tctggatcga ttcaagacga tcaacgatcg
     2461 cttcggccat cctgcgggcg acgcggttct tcgcgatgtc gcagcccgaa tcgccgcctc
     2521 ggtacccgag gccgggatga ccgcgcgcct gggcggagag gagtttatga tcgtgctgcc
     2581 cgagaccgac gaggcaggag cctgcgacat ggccgagacg atccgccggc gcatcgaggc
     2641 agacggcatc gtcctgccgc agttgtccgg cggcggacgg gtcagggtca ccgtctcggt
     2701 cggcgcggcg gttgcccacc cgcccaccgt ggatatgcgg gccgaaactc tggccgaatt
     2761 gtcgatggaa cgggccgatc gggcca
//
LOCUS       DTVW01001307            2892 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_792510, whole
            genome shotgun sequence.
ACCESSION   DTVW01001307 DTVW01000000
VERSION     DTVW01001307.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2892)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2892)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2892
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_792510"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..84
                     /gene="rplT"
                     /locus_tag="EYO87_17355"
     CDS             <1..84
                     /gene="rplT"
                     /locus_tag="EYO87_17355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020038559.1"
                     /note="binds directly to 23S ribosomal RNA prior to in
                     vitro assembly of the 50S ribosomal subunit; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="HIC67724.1"
                     /translation="DRKVLADLAIHEPEAFGAIVEKAKAAA"
     gene            complement(145..630)
                     /locus_tag="EYO87_17360"
     CDS             complement(145..630)
                     /locus_tag="EYO87_17360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007255087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CopG family transcriptional regulator"
                     /protein_id="HIC67725.1"
                     /translation="MNRTSSTRRNLLTGALMLTALPLLRPLAALAQSESQAAPQMNVT
                     KSPSCGCCKGWVDLARQQGFSVSVTDTDDYEGMKTANAVPEALWSCHTAVIDGYVIEG
                     HVPFAAIRTLLAERPDIAGLSVPGMPPDSPGMGGGADAVVPVTAWGGTAGDGTPFEFK
                     S"
     gene            830..2188
                     /locus_tag="EYO87_17365"
     CDS             830..2188
                     /locus_tag="EYO87_17365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008031095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HIC67726.1"
                     /translation="MTHHDPVSAIPARVPLATRPVGILRTVMIARRNVLGIIPELALR
                     QPIVSGQTGIRWHMVMDPDSLRHILKDRVEDYPKSVVTKLILEPAIGDSLFIAEGANW
                     RWQRRAAAPAFALRHVQALGPVMTAAAEASCRRLEAASGPVDLFAETVAATFEVISDV
                     TLSGERSFDRDAVHHAIDGYIAQTAKVSLMDVIGVPRWVPRPGRIFAGQGLRQMKQIA
                     DRAITDRAAAAQRQGPPDLLDLLLDADDPETGRTMNRDELRDNLLTFIVAGHETTALT
                     LAWALYLCAFDPDVQDRAATEARAILGDRAAAAADMERLPLIQRIVSEALRLYPPAAF
                     LSRTAQAHDRLCGREVRPGDTVMLPIYALHRHHLLWTNPDAFDPDRFLTPPDRYAFLP
                     FGAGPRICIGAGFAMQEAVIILATLLSRFRFTAIAGRAPEPRMILTLRPHGGVWLNVA
                     RR"
     gene            2266..>2892
                     /locus_tag="EYO87_17370"
     CDS             2266..>2892
                     /locus_tag="EYO87_17370"
                     /inference="COORDINATES: protein motif:HMM:NF033788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HIC67727.1"
                     /translation="METKDALDCFTALGQPLRLSVFRLLVRAGADGMPAGQIAEALSV
                     RDNTLSANLSVLSAAGLIAKRREGRSIRYFADLTTMRHLVDYLLSDCCGGNPDLCRPA
                     VNNLINPPRPISPSEDKVRDTPFNVLFLCTANSARSLIAEAILNADPSGRFRAFSAGS
                     HPSRQPNPRTLQLLERLDYDLAGIRSKSWDEFAGPDAPRMDFVFTVCDN"
BASE COUNT          447 a          977 c          947 g          521 t
ORIGIN      
        1 gatcgtaagg ttctggccga tctggccatc cacgagcccg aggcattcgg cgccatcgtc
       61 gaaaaggcga aggctgcggc ctgatcgcac gggattcgcg aacttccgaa agcccgcgcc
      121 ggatcggcgc gggctttctg cgtgctatga cttgaattcg aagggcgtgc cgtcgcccgc
      181 ggtgccgccc caggcggtga cgggcacaac cgcatccgcg ccgccgccca tgccgggcga
      241 atcgggcggc attccgggca ccgaaagacc ggcgatgtcg ggtcgctctg ccagcagcgt
      301 ccggattgcc gcgaagggca cgtgcccttc gatcacatag ccgtcgatga ccgcggtgtg
      361 acaggaccac agcgcctcgg ggaccgcgtt ggcggtcttc atgccttcgt aatcgtctgt
      421 gtcggtgaca ctgaccgaaa agccctgttg ccgggccaga tccacccaac ccttgcaaca
      481 gccgcagctg ggacttttgg tgacattcat ctgcggtgcg gcctggcttt cggactgggc
      541 cagggcggcg agggggcgca gcaatggcag agcggtcagc atcaaggccc cggtcagcag
      601 gttgcggcgg gtcgaggagg tgcggttcat cgtcttctct ctttggtgtc gatcaggcgg
      661 cgcaagcaac atcgcaggaa cacatggcca aggccggcct cgcgttcatg cgagaggtcg
      721 cattcttcca cattgcggcg ccggtcgggg gcgatcaatg cccgtccgat cacaagggtg
      781 cgacagaccg gcgattgagc cgcgggtcgc gcccgtctat cgtcgtgcca tgacgcatca
      841 tgatcccgtg tccgccatcc cggcccgcgt gccgctggcc acccgtcccg tcggcatcct
      901 gaggacggtg atgatcgcgc gccgcaacgt gctggggatc attcccgaac tggcgctgcg
      961 tcagcccatc gtgtcgggac agaccggtat ccgctggcac atggtcatgg atcccgacag
     1021 cctgcgccat atcctgaagg accgggtcga ggattatccg aaatcggtcg tcaccaagct
     1081 gatcctggaa ccggcaatcg gcgacagcct gttcatcgcc gaaggcgcga actggcgctg
     1141 gcagcgccga gccgccgcgc ccgccttcgc gctgcgccat gttcaggcgc ttggcccggt
     1201 gatgaccgcc gccgccgagg cgtcctgccg ccgtctcgag gccgcgtccg gtcctgtgga
     1261 tctgttcgcc gaaaccgtgg ccgcgacctt cgaggtgatc tcggacgtga ccttgtcggg
     1321 ggaacgatcc tttgaccgcg acgcggtgca tcacgccatc gacggctata tcgcgcagac
     1381 cgccaaggtg tcgctgatgg atgtgatcgg cgtgccgcga tgggtgccgc gtccgggacg
     1441 gatctttgcg gggcagggct tgcgacagat gaagcagatc gcggaccggg ccatcacgga
     1501 ccgggccgcc gccgcgcaac ggcagggtcc gcccgacctg ctggatctgc ttctggatgc
     1561 cgacgatccc gagaccggac gcaccatgaa tcgcgacgag ctgcgcgaca acctgctgac
     1621 cttcatcgtg gcgggacacg agacgacggc actgacgctg gcctgggcgc tgtatctttg
     1681 cgccttcgat cccgatgtgc aggaccgcgc agcgaccgag gcgcgggcga tcctcggcga
     1741 ccgggccgcc gccgccgccg acatggagcg gctgccgctg atccagcgca tcgtgtccga
     1801 ggccctgcgg ctttatccgc cggcggcctt cctgtcgcgc acggcgcagg cgcatgaccg
     1861 gctgtgcggc cgcgaggtcc gtcccggcga cacggtcatg ctgccgatct atgccctgca
     1921 tcgccaccat ctgctgtgga cgaatcccga tgccttcgat ccggaccggt tcctgacccc
     1981 gcccgaccgc tatgcctttc ttcccttcgg cgccggtccc cggatctgca tcggcgccgg
     2041 gttcgcgatg caggaggcgg tgatcatcct tgccaccctg ctgtcgcgat tccgtttcac
     2101 cgcgatagcc ggccgcgcgc cagagccgcg gatgatcctg accctgcggc cgcatggggg
     2161 cgtctggctg aacgtcgcgc ggcgctgacg acggattcgg cgcggcgctg gcggctggga
     2221 aaaatgactc ttgcgccccg aagatagttc cattattcgt gaattatgga aacgaaagat
     2281 gccctcgatt gttttaccgc cctcggccag ccgctgcgcc tgtcggtgtt ccgtcttctg
     2341 gtccgggcgg gcgcggatgg catgccggcg ggccagatcg ccgaggcttt gtcggtgcgc
     2401 gataacacgc tgtcggccaa tctgtcggtg ctgtctgcgg ccgggctgat cgcgaagcgc
     2461 cgcgagggac gttcgatccg ctatttcgcc gacctgacca ccatgcgaca tctggtcgat
     2521 tacctgctca gcgattgctg cggcgggaat ccggatttgt gcaggcccgc cgtcaacaac
     2581 ctcatcaacc cgccccgacc catttcgcca tcggaggaca aggtgcgcga cacgcccttc
     2641 aacgtgctgt ttctgtgcac cgccaattcg gcccggtcgc tgatcgccga ggcgatcctg
     2701 aacgccgatc cctcgggccg gttccgtgcc ttttcggccg gctcgcaccc ctcgcgccag
     2761 ccgaatccgc gcacgctgca attgctggaa cggctggact acgatcttgc cggcatccgg
     2821 tcgaaaagct gggacgaatt cgccggtccc gacgcgccgc ggatggattt cgtcttcacc
     2881 gtctgcgaca ac
//
LOCUS       DTVW01001308            1550 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_797894, whole
            genome shotgun sequence.
ACCESSION   DTVW01001308 DTVW01000000
VERSION     DTVW01001308.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1550)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1550)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1550
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_797894"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..991)
                     /locus_tag="EYO87_17375"
     CDS             complement(<1..991)
                     /locus_tag="EYO87_17375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008229900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HIC67728.1"
                     /translation="MLKHLKITATATAAAAILALAGPLAAHDAKPQTGGTLNVVIQPE
                     PPGLMIGLLQNGPTQMVAGDIYESLLRYDSELKPSGQLAESWEISEDGKTYTFKLRKG
                     VVFHDGEPFTSADVKFSMDKFLRETHSRMRTYMEHVESIDTPDDYTVVFKLKQPFGPF
                     LGIFEPGTAPVIPKHIYEGTDFANNPANANPIGTGPFKFAEWVKGSYIRLVRNEDYYM
                     EGKPYVDEIYYQVIPDAASRAVAYETGQVDVLPGGAIENFDVPRIREMDNTCITDKGW
                     EYFGPLSWIWINLDNKPLDDLKVRKAMMYALDREFARDALWSGLGKVATGPLSS"
     gene            complement(1102..>1550)
                     /locus_tag="EYO87_17380"
     CDS             complement(1102..>1550)
                     /locus_tag="EYO87_17380"
                     /inference="COORDINATES: protein motif:HMM:PF07729.10"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HIC67729.1"
                     /translation="VPVLTISQYHEIALIRIELEGLAAARAAELAQDRDVARLQRIVA
                     RNEEAIAAARWQQANQLNQEFHFALAEIADMPILLDVLDRLWLRMGPLLSEYYACAKQ
                     DMVRQHHIVISACGNRDPATAREAMQTDIATAREGIVAYIRSLETV"
BASE COUNT          274 a          483 c          470 g          323 t
ORIGIN      
        1 aggacgacag cggaccggtg gcgaccttgc ccagaccgct ccacaaggcg tccctcgcga
       61 attcgcggtc cagcgcatac atcatcgcct tgcggacctt cagatcgtcc agaggcttgt
      121 tgtccagatt gatccagatc caggacagcg gcccgaaata ttcccagccc ttgtcggtga
      181 tgcaggtatt gtccatctcg cggatgcggg gcacgtcgaa attctcgatc gcgccgccgg
      241 gcagcacgtc cacctggccg gtttcatagg ccacggcacg cgaggccgca tccgggatca
      301 cctgataata gatctcgtcc acatagggtt tgccctccat gtagtaatcc tcgttcctga
      361 ccagccggat atagctgccc ttgacccatt ccgcgaactt gaaggggccg gtgccgatgg
      421 ggttggcatt cgccggattg ttggcgaaat cggtgccttc atagatgtgc ttgggaatga
      481 ccggcgccgt gcccggctcg aatatgccga ggaagggacc gaacggctgc ttcagcttga
      541 acacgacggt ataatcgtcg ggcgtgtcga tgctttcgac atgttccata taggtccgca
      601 tccgtgaatg cgtttcgcgc aggaacttgt ccatcgagaa tttcacgtcc gccgaggtga
      661 acggctcgcc atcatgaaag accacgccct tgcgcagctt gaatgtgtag gtcttgccgt
      721 cttccgatat ttcccaggat tcggccagct gtccgctggg cttgagttct gaatcatagc
      781 gcagcaggct ttcgtagatg tcgcccgcga ccatctgggt cggtccgttc tggagaaggc
      841 cgatcatcag gccgggcggt tcgggctgga tgacgacatt cagcgtgccg cccgtctgcg
      901 gctttgcgtc atgcgcggcc agcggacccg ccagcgcaag aatggcggcg gcggccgtgg
      961 cggtggcggt gatcttgagg tgcttcaaca tggtgtctcc ctgacgttgt tataggttct
     1021 tggcattttc tgcttcggcc gcctgaaaca tgacgaccaa cccgccgctt gcgacgatcc
     1081 cgatccgggg cggcacaagc gtcagaccgt ttcgagcgat ctgatatagg cgacgatccc
     1141 ctcccttgcc gttgcgatgt cggtctgcat ggcctcgcgg gccgtcgccg ggtcacgatt
     1201 gccgcaggcg gaaatgacga tgtgatgctg cctgaccata tcctgctttg cgcaggcata
     1261 atattccgaa agcagcggcc ccatccgcaa ccacagccgg tccaggacat ccagcaggat
     1321 cggcatgtcg gcgatctcgg ccagggcaaa gtggaattcc tggttcagct ggttggcctg
     1381 ctgccaccgc gcggcggcaa tggcctcctc gttgcgcgcc acgatccgct gcaaccgggc
     1441 cacatcccgg tcctgcgcca gctccgcggc gcgggcggcg gccagcccct ccaactcgat
     1501 ccggatcagc gcgatctcgt gatactggct gatggtcagc accggaaccc
//
LOCUS       DTVW01001309            1141 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_802607, whole
            genome shotgun sequence.
ACCESSION   DTVW01001309 DTVW01000000
VERSION     DTVW01001309.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1141)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1141)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1141
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_802607"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..989)
                     /locus_tag="EYO87_17385"
     CDS             complement(<1..989)
                     /locus_tag="EYO87_17385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013962929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HIC67730.1"
                     /translation="MDKMPKWADVILTPLISLVLAMAISALVILAIGESPAAALKTMV
                     DGALGSSYGWGFTLYYTTNFIFTGLAVAVAYHARLFNIGGEGQAMMGGLGVALVLLSV
                     PLPHWLLALPAAMIGAALFGAAWALIPAWLQAKRGSHIVITTIMFNFIAAALLNYVLV
                     NILRPVGSMDPASARFPESTYLPALTDIAAAIGIQWGKNTPVNITFLIAILACLLVWL
                     LIWRTRLGYEIRALGRSEPGALYAGISPVRIIVIAMLISGGLAGLMAINNVMGESERL
                     VLNAVEGAGFIGIAVALMGRNHPFGVFLAALLFGFLYQGGGELALWTSIPREL"
BASE COUNT          227 a          375 c          362 g          177 t
ORIGIN      
        1 atcaattcgc gcgggatact ggtccacagc gccagctccc ctccgccctg ataaagaaag
       61 ccgaagagaa gcgcggccag aaagacaccg aaaggatggt tgcggcccat cagggccacg
      121 gcgatgccga tgaagcccgc accctcgacc gcgttcaaca ccagcctttc gctttcgccc
      181 atgacgttgt tgatcgccat cagtcccgcc agaccgcccg agatcagcat cgcgatcacg
      241 atgatgcgca ccgggctgat gccggcatag agcgcgcccg gctcggaccg gccgagggcg
      301 cggatctcgt atcccaggcg cgtccgccag atcagcagcc agaccagcag gcaggccagg
      361 atcgcgatca ggaaggtgat attgaccggc gtgttcttgc cccattggat tccgatcgcc
      421 gcggcgatgt cggtcagcgc cggaagatag gtgctttcgg ggaaccgggc cgaggccggg
      481 tccatgctgc cgaccggccg caggatgttg acaaggacat aattcagcag ggccgcggcg
      541 atgaagttga acatgatcgt ggtgatcacg atatgactgc cgcgcttcgc ctgaagccat
      601 gccgggatca gcgcccatgc cgcaccgaac agggccgcgc cgatcatcgc ggcgggcagg
      661 gccagcagcc agtgaggaag cggcaccgac agcaggacca gcgcgacgcc cagccccccc
      721 atcatcgcct gaccttcgcc gccgatattg aacaggcgcg cgtgataggc caccgcgacg
      781 gcaaggccgg tgaagatgaa attcgtcgtg taatacagcg tgaagcccca gccatagctg
      841 gatccaagcg cgccatcgac catcgtcttc agggccgcgg cggggctttc gccgatggcc
      901 aggatcacga gggccgaaat cgccatggcc agaaccagcg aaatcagcgg cgtcaggatc
      961 acgtcggccc atttcggcat cttgtccatc agcgcggccc cccgttcgcg gtctcgtccg
     1021 gcaggtcatc gacatgcctg tgttcaggcg ggatgccatc ttcggcggcg tgatgttcgg
     1081 tatcggtcac gccggccatc agcaggccaa gctcgcccgt cgtggtctga tcgggcagcc
     1141 g
//
LOCUS       DTVW01001310            2546 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_803551, whole
            genome shotgun sequence.
ACCESSION   DTVW01001310 DTVW01000000
VERSION     DTVW01001310.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2546)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2546)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2546
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_803551"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..670)
                     /locus_tag="EYO87_17390"
     CDS             complement(<1..670)
                     /locus_tag="EYO87_17390"
                     /inference="COORDINATES: protein motif:HMM:PF06629.10"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67731.1"
                     /translation="MKKLLLAALFAAPLAAPALAQDFGATGGRDFSVELGLGVQGKPT
                     YPGAEDAEVSPWVIWQNARLGGAGGEKQGFSIAPSLGLVGPRDPSDDAALAGLDKIDR
                     SYEVGAKVSYGAGPVTAYGTLRRGFGGNEGLTGEVGATYRTDLSDRVTLWSGLELGYG
                     NDDYNGTYFGVSPSEAIYTVRENPALIAGAIVELTIHDGAAVSVSHLRTRWMKLIEVA
                     PIVQP"
     gene            complement(793..>2546)
                     /locus_tag="EYO87_17395"
     CDS             complement(793..>2546)
                     /locus_tag="EYO87_17395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007800410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIC67732.1"
                     /translation="GPNGAGKTTLFRLLRGEIAPDGGEIALPSRARIGGVAQEAPGTA
                     LPVLQTVLAEDRERSALLAEADRATDAHRIAEIQTRLTDIDAWSAEARAASILVGLGF
                     SPADQARPTSDFSGGWRMRVALAGVLFARPDLLLLDEPTNYLDLEGALWLETYLARYP
                     HTVIIISHDRDLLNRAVGHILHLEQRKLTLYTGGYDDFARLRAEKRALQAAEAKKQHA
                     RRAHLQSFVDRFRAKASKARQAQARVKMLEKMQPITAPEEARFHRFGFPQPEDLSPPI
                     VAMENVAVGYGDRAVLRQLNLRIDQDDRIALLGRNGQGKSTLSKLLAERLDVMAGKLI
                     RSGKLRVGYFAQHQVDELYLDETPIDHVRRLRPDEAPARLRARLAGFGLMEAQAETRV
                     GQLSGGQKARLSLLIATIDAPHLLVLDEPTNHLDIESREALSEALNDYTGAVVLVSHD
                     MHLLGLVADRLWLVNEGAVTAYEGDLDDYRRFLLSGDDDPKPKAETSKPAPRRAPRDE
                     LLSLRSQVRRAEERVQKLTEMLEKLDVKLADPSLYNDPHEARKWSLKRDEATQAMARA
                     ETLWLTALENLEAAETG"
BASE COUNT          419 a          887 c          804 g          436 t
ORIGIN      
        1 gcggctgcac aatgggggcg acttcgatca gcttcatcca gcgcgtcctg aggtgggaga
       61 cgctgactgc ggcgccgtca tggatggtca gttcgacaat cgctccagct atcagcgcgg
      121 gattttctcg gacggtgtag atcgcctcgg agggcgagac gccgaaatag gtgccgttgt
      181 agtcgtcgtt tccgtagcca agctccagcc ccgaccacaa cgtcacgcgg tcgctgagat
      241 cggtccggta ggtcgcgccg acctcgcccg tcaagccctc gttgccgcca aagccccgcc
      301 gcagcgttcc ataggcggtg acaggcccgg caccatagct gaccttggcc ccaacctcat
      361 aggaacggtc gatcttgtcc agcccggcca gcgccgcatc gtcggaagga tcgcgcgggc
      421 cgaccagacc cagcgacggc gcgatcgaaa agccctgctt ctcgccgccg gcgccgccca
      481 gccgcgcgtt ctgccagatt acccagggcg agacctcggc atcctctgcg cccggatagg
      541 tcggcttgcc ctgcaccccc agccccagtt cgaccgagaa gtcgcgcccg ccggtcgcgc
      601 cgaaatcctg cgccagcgcc ggcgcggcca agggtgctgc aaagagcgcg gcaagcagaa
      661 gctttttcat caagcaaaat ccgtcggcat gactatctga actctcttta cgggcgaatc
      721 gggccgtcgc acaagccggt gcctcacaat ccgcgcggat ggccgcgacg cgcgcgcatc
      781 ctggcaacag aatcaaccgg tttcggcggc ttccaggttt tccagcgcgg tcagccacag
      841 tgtttcggcc cgcgccatgg cctgcgtcgc ctcatcgcgt ttcagggacc atttccgcgc
      901 ttcgtgcgga tcgttgtaaa gtgacgggtc ggccagtttc acatccagct tttccagcat
      961 ctcggtcagc ttctgcaccc tttcctcggc ccgccggacc tgggaccgca gcgacagcaa
     1021 ttcatcgcgc ggcgcgcgcc tgggggcggg tttcgacgtc tcggccttcg gcttggggtc
     1081 gtcatcgccc gacagcagga aacggcgata atcgtccaga tcaccctcgt aggccgttac
     1141 cgcgccctcg ttgaccaacc acagccggtc tgcgaccaac cccagcaggt gcatgtcgtg
     1201 gctgaccagc accaccgcgc cggtataatc gttcagcgcc tcggacagcg cctcgcggct
     1261 ttcgatgtcg agatggttgg taggttcatc caggaccaga agatgcggcg cgtcgatggt
     1321 cgcaatcagc agcgacagcc gcgccttctg gccgcccgac aattgcccga cgcgggtttc
     1381 cgcctgcgcc tccatcagcc cgaatcccgc gagccgggcg cgcagccggg ccggagcctc
     1441 gtccgggcgc aggcggcgca catggtcgat gggggtttcg tccaggtaaa gctcatcgac
     1501 ctgatgctgg gcgaaatagc ccacgcgcag cttgcccgat cggatcagct tgcccgccat
     1561 cacgtccagc ctttcggcca gcagcttcga cagggtcgat ttgccctgcc cgttccggcc
     1621 cagaagcgcg atccggtcgt cctggtcgat gcgcaggttc agctgccgca gcaccgcgcg
     1681 atcgccatag cccacggcga cattctccat cgccacgatg ggcggcgaca gatcctcggg
     1741 ctggggaaag ccgaaacgat ggaacctggc ctcttccggc gccgtgatgg gctgcatctt
     1801 ctccagcatc ttgacccgtg cctgcgcctg ccgcgccttg ctggccttgg cgcgaaagcg
     1861 gtccacgaag ctttgcagat gcgcgcgccg ggcgtgctgt ttctttgcct cggccgcctg
     1921 aagcgcccgc ttctcggccc gaagccgggc gaaatcgtca tagccgcccg tgtaaagcgt
     1981 cagcttgcgc tgttcgagat gcaggatatg gcccacggcg cggttcaaca ggtcgcggtc
     2041 gtggctgata atgatgacgg tatggggata gcgggccaga taggtctcca gccacaacgc
     2101 gccttccagg tccagatagt tcgtcggctc gtccagaagc agcaggtcgg gccgcgcgaa
     2161 cagcaccccg gccagggcca cgcgcatccg ccagccaccc gagaaatcgc tggtcgggcg
     2221 ggcctgatcg gcgggcgaaa agcccagccc aaccagaatc gaggccgccc tagcctcggc
     2281 cgaccatgcg tcgatatcgg tcagccgggt ctggatctcg gcgatgcgat gggcgtcggt
     2341 ggcgcggtct gcctcggcca gcagggcaga ccgttcgcga tcttcggcca ggacggtttg
     2401 cagcaccggc agcgcggttc ccggcgcctc ctgcgccaca ccgccgatcc gggcacggct
     2461 gggcagcgcg atctcacccc cgtccggtgc gatctcgccg cgcagcagcc ggaacagcgt
     2521 ggtcttgccg gcgccattgg ggccga
//
LOCUS       DTVW01001311            5283 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_809467, whole
            genome shotgun sequence.
ACCESSION   DTVW01001311 DTVW01000000
VERSION     DTVW01001311.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 5283)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5283)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5283
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_809467"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..182
                     /locus_tag="EYO87_17400"
     CDS             <1..182
                     /locus_tag="EYO87_17400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011749883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67733.1"
                     /translation="PSGPGIRVDGQTTAHYIAEALAGSGVVVTGLAQGVPIGGELDYL
                     DDGTISAALRARRRL"
     gene            219..920
                     /locus_tag="EYO87_17405"
     CDS             219..920
                     /locus_tag="EYO87_17405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007256859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HIC67734.1"
                     /translation="MLPPSSNKGCVVKVDLVIFDCDGVIADSEILSAEVLIEQLAAEG
                     LALSAEDVRRDFLGRSFPTVAETIRRRHDRALPPGFEADYRSRLLSRFETELRPTPGF
                     ARMIEALDRPVCVATSSSRPRVNKTLEILGLTAFFNADVFTASQVERGKPAPDLFLFA
                     ARRMGVPPPACLVVEDSAPGLQAAAAAGMPHLHYTGGSHLSGAGPGDGPTESFDNWAD
                     FAHLLMRLEEGQARP"
     gene            917..1873
                     /locus_tag="EYO87_17410"
     CDS             917..1873
                     /locus_tag="EYO87_17410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017927430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar-binding transcriptional regulator"
                     /protein_id="HIC67735.1"
                     /translation="MTHGRFTPEATRLDDAARAGWLYYVAGNTQDEIARKLGVSRQSA
                     QRLVAMAVAERLVKVRLDHPIGRCMDLAYEMKHRFGLKSCEVVPSDPEAPDLLTGIAI
                     SAAAELERVLKSSERRVVSLGTGRALKATVEQLPRMSCPQHVVVSRLGNMMQDGSASP
                     YNATIRLAERIGAAHYPYPLPVLARSATELAAMREQEAVRNTLRQCEEADLSLVGIGQ
                     MDTSAPLFVDGFASAAEMEDLKSAGAVGEITSWVYDRAGKVIDCDFNARVASAPLPRA
                     ADRPVIAVATGEAKLPAIRAALTGHLINGLITSEATAERLLT"
     gene            2017..3339
                     /locus_tag="EYO87_17415"
     CDS             2017..3339
                     /locus_tag="EYO87_17415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018633803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter substrate-binding protein"
                     /protein_id="HIC67736.1"
                     /translation="MKTTIRALLGASALCAVGGIAAAQETTLTIATVNNGDMIRMQGL
                     TSDFTEKNPDIKLEWVTLEENILRERVTTDIATQGGQYDVLTIGTYEVPIWAKQQWLV
                     PLDDLGADYDAGDLLPAVREALSVDGTLYAAPFYGESAMVMYRTDLAEKAGVTIPDSP
                     TWADIKTAAEKMTDKANETYGICLRGKPGWGENMAFLTAMANSYGARWFDMDWKPQFD
                     SAEWKAALTDYLDLMTNYGPPGASSNGFNENLSLFQQGKCGMWIDATVAASFVTDPEN
                     SKVADSVGFAQFPNKEGVDNHGNWLWAWSLAIPASSKQQDAAKQFIAWATSKGYTELV
                     ASKDGWRAAPPGTRTSLYENPEYQKEAPFAAMTLKSIDSANTQKSSVQDIPYTGGQFV
                     AIPEFQGIGTAVGQQFSAALAGQMSAEDALAAAQSNTTREMTRSGYIK"
     gene            3439..4308
                     /locus_tag="EYO87_17420"
     CDS             3439..4308
                     /locus_tag="EYO87_17420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018326775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HIC67737.1"
                     /translation="MATRQTASLARLMRAPAIILLLIWMVIPLGMTLYYSFLNYNLLN
                     PSVTSWAGWFNYQYFYTDPAFLESIWNTIVLVLGVLLITVCGGIGIAMLIDKPIFGQG
                     IVRILVISPFFVMPPVAALIWKNMIMHPSYGVFADIAKFFGASPVDWFAQFPLLSIII
                     IVAWQWLPFATLILLTALQSLDGEQMEAAEMDGAPAISRFIHLVLPHMARAITVVILI
                     QTIFLLGIYAEILVTTNGGPGFASTNLTFLIYRAARLNFDIGGAAAGGIIAVILANIV
                     AIFLMRAVGRNLD"
     gene            4318..5142
                     /locus_tag="EYO87_17425"
     CDS             4318..5142
                     /locus_tag="EYO87_17425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018425975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HIC67738.1"
                     /translation="MARAVSRNAKIGWTIAAWSVALIIFFPILYTIITSLKTEQEAIS
                     GFNLIPSFSLSSYEAVQSQNNYWRPFSNSVVIAVGSTLLALIVAIPAAWAMAFSPTKR
                     TKDILMWMLSTKMMPAVAVLVPIYLIFLRTGLMDTRTGLVIVLMLMNLPIVVWMLYTY
                     FREIPGEILEAARMDGASLRDEILYVLTPMAVPGIASTLLLNIILAWNEAFWTIQLTT
                     TNAAPLSAFIASFSSPQGLFWAKLSAASTMAIAPILILGWFSQKQLVRGLTFGAVK"
     gene            5152..>5283
                     /locus_tag="EYO87_17430"
     CDS             5152..>5283
                     /locus_tag="EYO87_17430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005853356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HIC67739.1"
                     /translation="MGQITLEEVAKRFGEVEVIPPLDLTIEDGEFVVFVGPSGCGKST
                     "
BASE COUNT          989 a         1684 c         1657 g          953 t
ORIGIN      
        1 cgcccagtgg cccgggcatc cgcgtcgatg gccagaccac cgcccattac atcgccgagg
       61 cgctggcggg cagcggtgtc gtcgtgaccg gccttgccca gggcgttccc atcggcggag
      121 agctggatta tctggacgac ggcacgatca gcgctgcgct gcgggcaaga cgaaggcttt
      181 agaattcgca atcccttgcg gcagggcggg cgggcgctat gctgccgccc tcatcgaaca
      241 aggggtgcgt ggtgaaggtc gatctggtca tcttcgattg cgacggtgtc attgccgaca
      301 gcgaaatcct ttcggccgag gtgctcatcg aacaactcgc cgccgaaggg cttgcgctga
      361 gcgccgagga tgtgcgccgc gatttcctgg ggcgcagctt tcccaccgtg gccgaaacca
      421 tacgccgccg ccatgaccgc gccttgccgc ccggtttcga ggccgactac cgcagccgcc
      481 tgctgtcccg gttcgagacc gagctacgcc cgacgccggg gttcgcgcgc atgatcgagg
      541 ccctggaccg gccggtctgc gtggccacct cctcaagcag gccgcgggtg aataagacac
      601 ttgaaatcct tggtttgaca gcgtttttca acgccgatgt ctttaccgca agccaggtcg
      661 aacgcggcaa gccggcgcct gatctgttcc tgttcgcggc ccgccgaatg ggcgtcccgc
      721 ccccggcctg cctggtggtc gaggacagcg cgccgggcct tcaggcggcg gctgcggcgg
      781 ggatgccgca tctgcattat accggcggaa gccatctgtc gggcgccggc cccggcgatg
      841 gcccgaccga aagctttgac aactgggccg atttcgcgca cctcttgatg aggctggagg
      901 agggacaggc caggccatga cccatggacg cttcaccccc gaggcgacgc gcctggacga
      961 tgcggcacgc gccggctggc tgtattacgt ggccggcaac acgcaggacg agatcgcgcg
     1021 caagctgggc gtcagccgcc aatcggcgca acgccttgtg gcaatggcgg tggccgaacg
     1081 gctggtcaag gtgcgcctgg atcatccgat cggtcgctgc atggaccttg cctatgagat
     1141 gaaacaccgt ttcgggctga aaagctgcga ggtggtgccc tcggaccccg aagcgcccga
     1201 tctgctgacc ggcatagcca tctcggcggc ggccgagctt gagcgggtgc tgaaatcgtc
     1261 cgaacgccgg gttgtcagcc tcgggaccgg gcgggcgctg aaagcgacgg tcgagcaatt
     1321 gccgcgcatg tcctgcccgc agcacgtcgt cgtctcgcgt ctgggcaaca tgatgcagga
     1381 cggatccgcc tcgccctata acgcgacgat ccgtctggcc gaaaggatcg gcgcagccca
     1441 ttacccctat ccgctgccgg ttctggcccg cagcgccacg gaactggctg cgatgcgcga
     1501 acaagaggca gtccgcaaca ccctgcgtca atgcgaagag gcggacctgt ctctggtcgg
     1561 gatcggacag atggacacca gcgcaccgct gtttgtggat ggattcgcca gtgccgccga
     1621 aatggaggat ctgaaatccg ccggtgccgt gggcgagatc accagttggg tctatgaccg
     1681 ggcaggcaag gtgatcgatt gcgatttcaa cgcccgcgtg gcctcggccc cgctgccacg
     1741 cgccgccgat cgcccggtga tcgcggtggc cacaggcgag gccaagctgc ccgcgattcg
     1801 cgccgccctg accgggcatc tgatcaacgg tctgatcacc tcggaagcca ctgcagagcg
     1861 actactgaca tgatcggaac cgagaaaatc cattcatatc ggccatttgc acgggaagac
     1921 cggaccttgc ctgcaaatgt attgacagaa tcgggcagga agatgaatat ttgcccaccg
     1981 gtagagcaaa tgcccaaccg ccaagggagg aactacatga agacgaccat ccgcgccctg
     2041 ctgggcgctt ccgcgctttg cgccgtgggc ggcattgccg cggcgcagga aaccacgctg
     2101 accatcgcca ccgtcaataa cggcgacatg atccggatgc agggtctgac cagcgacttc
     2161 accgagaaga accccgacat caagcttgaa tgggtgacac tggaagagaa catcctgcgc
     2221 gagcgcgtaa ccaccgacat cgccacgcag ggcggccagt atgatgtgct gaccatcggc
     2281 acctacgagg ttccgatctg ggccaagcaa caatggctgg tgccgctgga cgatctgggc
     2341 gccgattacg acgccggcga cctgctgccc gccgtccgcg aggcgctgtc ggtcgatggc
     2401 acgctttatg cggccccctt ctatggcgaa tccgcgatgg tgatgtatcg caccgacctg
     2461 gccgaaaagg ccggtgtcac cattcccgac agcccgacct gggccgatat caagaccgcc
     2521 gccgaaaaga tgaccgacaa ggccaatgaa acctacggca tctgcctgcg cggcaagccc
     2581 ggctggggcg agaacatggc cttcctgacc gcaatggcca acagctatgg cgcgcgctgg
     2641 ttcgacatgg actggaaacc gcaattcgac agcgcggaat ggaaggcggc attgaccgat
     2701 tatctggacc tgatgaccaa ttacggtccg ccgggtgcct cgtccaacgg cttcaacgag
     2761 aacctgtcgc tgttccagca gggaaaatgc ggcatgtgga tcgacgcgac cgtcgccgcc
     2821 agcttcgtga ccgacccgga aaactctaaa gtggccgaca gcgtgggctt cgcgcaattc
     2881 cccaacaagg aaggcgtgga caatcacggc aactggctgt gggcatggag cctggcgatc
     2941 ccggcctcgt cgaagcaaca ggatgcggcg aagcagttca tcgcctgggc aacatcgaag
     3001 ggctataccg agttggttgc cagcaaggat ggctggcgcg ccgcacctcc gggcacgcgg
     3061 acctcgcttt atgagaatcc cgaataccag aaagaggcgc ctttcgccgc gatgacgctg
     3121 aaatccatcg attcggcgaa tacgcagaaa tcctcggttc aggatattcc ctatacgggg
     3181 gggcaatttg tcgcgatccc ggaattccag gggatcggca cggcggtggg ccagcaattc
     3241 tcggccgcac tggcggggca gatgtcggcc gaggacgccc tggccgctgc gcagtccaat
     3301 accacccgcg agatgacgcg gtcgggctac atcaagtagg ctttgaaata gcgccgtccg
     3361 gcccgtccgg gcggcgcgac aaggaatggg gggaaggcgc gggccgcgtg gccccgccgc
     3421 ccgaggagga gcaagatcat ggcaacacgc cagaccgcca gcctcgcgcg gctgatgcgc
     3481 gcaccagcga tcatcctttt gctgatctgg atggtaatcc cgctgggaat gacgctttac
     3541 tattcgttcc tgaactacaa cctgctcaat cccagtgtca caagctgggc gggctggttc
     3601 aactatcaat atttctacac cgatccggcc ttccttgaat cgatctggaa cacgatcgtg
     3661 ctggtcctgg gcgtcctgct gatcaccgtc tgcggcggca tcggcatcgc catgctgatc
     3721 gacaagccga tcttcggaca gggtatcgtg cggatcctgg tgatcagccc tttcttcgtc
     3781 atgccgccgg tcgcggccct gatctggaaa aacatgatca tgcatcccag ctacggggtg
     3841 ttcgccgaca tcgccaagtt ctttggcgca agcccggtgg actggttcgc gcaatttcct
     3901 ttgctgtcga tcatcatcat cgtcgcctgg caatggctgc ccttcgcaac gctgatcctg
     3961 ctgaccgcgc tgcaatcgct ggatggcgag cagatggagg ccgcggaaat ggacggagcg
     4021 cccgcaatca gccgcttcat ccatctggtg ctgccgcata tggcccgcgc aatcaccgtg
     4081 gtcatcctga tccagaccat cttcctgctg gggatctacg cggaaatcct ggtgaccacc
     4141 aatggcggac cgggtttcgc ctcgaccaac ctgaccttcc tgatctaccg cgccgcccgg
     4201 ctgaacttcg atatcggcgg cgccgcggcg ggcgggatca tcgccgtcat cctggccaat
     4261 atcgtcgcca tcttcctgat gcgcgccgtc ggccggaacc tggactgagg ggacatcatg
     4321 gcacgcgcgg tttccagaaa cgcgaagatc ggttggacca tcgccgcctg gtcggtggcg
     4381 ctgatcatct tctttccgat cctctacacg atcatcacca gcctgaagac cgagcaggag
     4441 gcgatttccg gcttcaacct gatcccctcc ttcagcctgt ccagttacga ggcggtgcag
     4501 agccagaaca actactggcg gccgttttcc aactcggtcg tgatcgcggt cggctcgacg
     4561 ctgctggcgc tgatcgtggc gattccggcg gcctgggcaa tggccttctc gcccaccaag
     4621 cgcaccaagg acatcctgat gtggatgctg tccaccaaga tgatgccggc cgtcgcggtg
     4681 ctggtgccga tctatctgat cttcctgcgc accgggctga tggacacccg gaccgggctg
     4741 gtcatcgtgc tgatgctgat gaacctgccg atcgtggtct ggatgctcta tacctacttc
     4801 cgcgagattc cgggcgagat cctggaagcc gcgcggatgg acggcgccag cctgcgggac
     4861 gagatcctgt atgtgctgac gccgatggcg gtgccgggca tcgcctcgac cctgcttttg
     4921 aacatcatcc tggcctggaa cgaggcgttc tggacgatcc agctgaccac caccaatgcc
     4981 gcgccgctct cggccttcat tgcctcgttc tccagcccgc aggggctgtt ctgggcgaaa
     5041 ctttcggcgg catcgaccat ggcgatcgcc ccgatcctga tcctgggctg gttcagccag
     5101 aaacaacttg tccgcggcct gaccttcggc gcggtgaaat aggagaccac gatgggacag
     5161 atcaccctgg aagaggtggc caagcggttc ggcgaggtcg aggttatccc gccgctggac
     5221 ctgaccatcg aggacggcga attcgtggtc ttcgtggggc cctcgggctg cggcaagtcc
     5281 acc
//
LOCUS       DTVW01001312            1456 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_810585, whole
            genome shotgun sequence.
ACCESSION   DTVW01001312 DTVW01000000
VERSION     DTVW01001312.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1456)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1456)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1456
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_810585"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..243
                     /gene="rpsK"
                     /locus_tag="EYO87_17435"
     CDS             <1..243
                     /gene="rpsK"
                     /locus_tag="EYO87_17435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014875982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HIC67740.1"
                     /translation="MGFKGSRKSTPYAAQMAAEDAGRKAQEHGVKTLEVEVQGPGSGR
                     ESALRALAAVGFNITAIRDVTPIAHNGCRPPKRRRV"
     gene            361..1377
                     /locus_tag="EYO87_17440"
     CDS             361..1377
                     /locus_tag="EYO87_17440"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011909467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha"
                     /protein_id="HIC67741.1"
                     /translation="MIHKNWAELIKPTQLVVRPGADATRTATLVAEPLERGFGLTLGN
                     ALRRVLLSSLQGGAITSVQIDNVLHEFSSVAGVREDVTDIVLNLKGVTLKMDVEGPKR
                     LTLAAKGPGEVKAGDIQETAGITVLNRDHVICHLDDGADLNVELTVATGKGYVAADKN
                     RPEDAPIGLIPIDAIFSPVKRVSYEVTPTREGQVLDYDKLTMKIETDGSLTPEDAVAY
                     AARIVQDQLSVFVNFDEPESANRQDNDDGLEFDPRLLKKVDELELSVRSANCLKNDNI
                     VYIGDLIQKTEAEMLRTPNFGRKSLNEIKEVLSHMGLHLGMEIASWPPENIEDMAKRL
                     EEPY"
BASE COUNT          314 a          427 c          471 g          244 t
ORIGIN      
        1 atgggcttca aggggtcgcg caaatcgacg ccctacgctg cccagatggc tgccgaggat
       61 gctggccgca aggcgcagga acacggcgtg aagacgctgg aggtcgaggt tcagggaccc
      121 ggttcgggac gtgaatcggc cctgcgcgcg ctggctgccg taggcttcaa tatcaccgcc
      181 atccgcgacg tgacgccaat cgcccataac ggttgccgcc cgcccaagcg tcgccgcgtc
      241 tgatcctgga tcattaacaa gccggaccgc gtgtcgattg cgcggtccgg acatttcgca
      301 tttcacctcg ggcgtttccg gccttggtca tgggacggaa acaagaatgg aggcacatcc
      361 atgatccaca agaattgggc cgaacttatc aagccgacac agcttgtcgt caggccgggc
      421 gccgatgcga cccggacagc gacgctggtc gccgaaccgc tggagcgggg cttcggcctg
      481 acgctgggca acgcgctgcg ccgggttctg ctgtcctcgc tgcagggcgg cgcgatcacc
      541 tcggttcaga tcgacaatgt gctgcatgaa ttcagcagcg tggcgggcgt ccgtgaggac
      601 gtgaccgaca tcgtgctgaa tctcaagggc gtgacgttga agatggatgt cgaggggccc
      661 aagcgactga ccctggccgc caagggtccg ggcgaggtca aggccggcga cattcaggaa
      721 acggccggca ttaccgtcct gaaccgcgac catgtgattt gtcacctgga tgacggcgcg
      781 gatctgaacg tggaactgac cgtagccacc ggcaaggggt atgtcgctgc agacaagaac
      841 cgacccgaag acgcgcccat cggcctgatc ccgatcgacg ccatcttctc gccggtcaag
      901 cgggtcagct acgaagtcac gcccacccgc gagggtcagg tgctggacta tgacaagctg
      961 accatgaaga tcgagaccga cggctcgctg accccggaag acgccgtggc ctatgccgcg
     1021 cgcatcgttc aggatcaatt gtcggtcttt gtcaatttcg acgaaccgga atcggccaac
     1081 cgccaggaca acgacgacgg cctggaattc gatccgcgcc tgctgaagaa ggtggacgag
     1141 ttggaattgt cggtgcgctc ggccaactgc ctgaagaacg acaacatcgt ctatatcggc
     1201 gatctgatcc agaagaccga ggccgagatg ctgcggacgc cgaatttcgg ccgcaaatcc
     1261 ctgaacgaga tcaaggaagt gctgagccat atggggctgc atttgggcat ggaaatcgcc
     1321 agctggccgc cggaaaatat cgaagatatg gccaaaaggc tggaagagcc ttattaagag
     1381 cggcgccacg gcgcgaggag agagagatgc ggcatcgcaa tagtgggcgt aagctgaacc
     1441 ggtcgtcgag ccaccg
//
LOCUS       DTVW01001313            1212 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_810921, whole
            genome shotgun sequence.
ACCESSION   DTVW01001313 DTVW01000000
VERSION     DTVW01001313.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1212)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1212)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1212
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_810921"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..186
                     /locus_tag="EYO87_17445"
     CDS             <1..186
                     /locus_tag="EYO87_17445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010392365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter"
                     /protein_id="HIC67742.1"
                     /translation="LADEPTGNLDPGTSDRVFDMLMALVRETGLAALIATHNHDLAAR
                     MDRVIRLTGAAGDTPPG"
     gene            330..920
                     /locus_tag="EYO87_17450"
     CDS             330..920
                     /locus_tag="EYO87_17450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005652389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin family protein"
                     /protein_id="HIC67743.1"
                     /translation="MKFAIISTAAILTAGAASAGGYTAPVAESSPAIITAPVVEQGPN
                     WGGFYGGLQYGKGNASLSNGGFDENLDAYGLHGGYLYDMGRYVVGGELDYNKINLDNN
                     GGDGDLARLKGRAGMKFGRFMPYLTAGYARISTNQDAGDVSEGAFAYGLGAEYMVNNR
                     FSVGAEYTRQDFKDVSNVNGLDLDTDMVQMRASYRF"
BASE COUNT          217 a          401 c          403 g          191 t
ORIGIN      
        1 ctggcggacg agccgaccgg aaacctggac cccggcacct cggaccgggt gttcgacatg
       61 ctgatggcgc tggttcgcga gaccgggctg gccgcgctga tcgcgacgca taatcacgac
      121 ctggcggcgc ggatggaccg ggtgatccgg ctgaccgggg ccgccggcga caccccgccg
      181 ggctgacctt cgcaggcccg gccgcgccgc ccggcctgtt gcagcaagac cacatccgcc
      241 ggcccgatca ccttttccgg cgatcccttg cgaatcccgc gcgttgggca gacatcgacg
      301 caaccattcg acagcaaagg agaaatggta tgaaattcgc aatcatctcc accgcggcga
      361 tcctgacggc cggtgcggct tcggccgggg gctatacggc gcccgtcgcc gaaagcagcc
      421 ccgccatcat caccgcgccc gtggtcgagc agggcccgaa ctggggcggc ttctacggcg
      481 gtctgcaata cggcaagggc aatgccagcc tgtcgaacgg cggcttcgac gaaaatctcg
      541 acgcctatgg tctgcacggc ggctatctct acgacatggg ccgctatgtc gtcggcggcg
      601 agctggacta caacaagatc aatctcgaca acaacggcgg cgatggcgac ctggcgcgtc
      661 tgaagggccg cgccgggatg aagttcggca ggttcatgcc ctatctgacg gccggctatg
      721 cccggatttc gaccaaccag gatgcgggcg acgtgtccga gggcgccttt gcctatgggc
      781 tgggggccga atacatggtc aacaaccggt tttcggtcgg cgccgaatac acccgccagg
      841 acttcaagga cgtgtccaac gtgaacggcc tggatctgga caccgacatg gtgcagatgc
      901 gcgcctcgta tcgcttctga tcgcggacgg gtttctgcga caggacgggc ggcccctgcg
      961 accgcccgtc ttttcattca ccggaaggga tgttccaggc gcgtcgcggc gcatcgcggc
     1021 gcggcccgcg cggaaggcgc ggtcaaacgg gccgatggcg ggattttgca ggaatgcgcg
     1081 gcgatccgtc gccgttgacc ccggtggccc gcaagactaa accggccaca gccaacccgt
     1141 cgcgggcagc caccgatccc gcggccgaaa gggggattcg cccgtggaac cattgttgca
     1201 ggaatatctg cc
//
LOCUS       DTVW01001314            1190 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_811933, whole
            genome shotgun sequence.
ACCESSION   DTVW01001314 DTVW01000000
VERSION     DTVW01001314.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1190)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1190)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1190
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_811933"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..716)
                     /locus_tag="EYO87_17455"
     CDS             complement(<1..716)
                     /locus_tag="EYO87_17455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014874601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HIC67744.1"
                     /translation="MAKVAFLGLGVMGGPMAGHLKAAGHEVTVYNRTASRAKEWVARH
                     GGASAPSPREAAEGADFVMACVGNDDDLRAICLGDDGAFAGMAEGAVFVDHTTVSAAV
                     TRDLAALAAAAGIGYVDAPISGGQAGAENGKLSVMCGGAQADFDRAAPVIDAYAKICR
                     LMGDVGAGQITKMCNQIAIAGLVQALSESLAFAKKSGLEVGRVVEVISQGAAGSWQME
                     NRHKTMDAGEFDHGFAVDWMR"
     gene            904..>1190
                     /locus_tag="EYO87_17460"
     CDS             904..>1190
                     /locus_tag="EYO87_17460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011750236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin acylase family protein"
                     /protein_id="HIC67745.1"
                     /translation="MLTLFRWLLRLTIALIVVLVLAVVLAWYFFVRSLPDYDATLTVS
                     GISAPVEIVRSTEDVPNIFGQTDEDVFFALGLAHAQDRLFQMTLLRRAAQGR"
BASE COUNT          175 a          448 c          366 g          201 t
ORIGIN      
        1 cgcatccagt ccacggcgaa gccatgatcg aattcgcccg catccatggt cttgtggcgg
       61 ttctccatct gccagctacc ggcggcaccc tgcgagatga cttcgaccac ccggccgacc
      121 tcgaggccgg atttcttcgc gaaggccagc gattcggaca gcgcctggac cagcccggcg
      181 atggcgatct ggttgcacat cttcgtgatc tggcccgccc cgacatcgcc catcagacgg
      241 caaatcttgg cataggcgtc gatcaccggc gcggcgcggt cgaaatcggc ctgcgcgccg
      301 ccgcacatca ccgacaattt gccattctcg gcccccgcct gcccgcccga gatcggcgcg
      361 tccacgtagc cgatcccggc cgccgcggcc agtgcggcca gatcccgcgt gacagccgcc
      421 gagacggtgg tgtgatcgac gaagaccgcg ccctcggcca tgccggcaaa ggcgccgtca
      481 tcgccaaggc agatcgcgcg caggtcgtcg tcgttgccga cgcaggccat cacgaaatcg
      541 gcgccttcgg ccgcctcgcg ggggctgggc gcgctggcgc cgccatgcct ggccacccat
      601 tccttcgcgc gggatgccgt gcggttgtaa accgtcacct cgtggcccgc cgccttcaga
      661 tgccccgcca tcgggccgcc catcacgccc agtcccagaa atgccacttt cgccatcgcg
      721 ccgatcctcc gctgttgcct tgcgccgaca ggggccgggc cttctttggc gccggcccaa
      781 ccccgcgttg aaatgcccgc gcggctgtcc tatgcagcaa cccaccaccc ccgcgcgtcc
      841 cggtcaagcc ggccgatgcg cccgaagaac aggcgccgcg ccgcacatgg aattccgccc
      901 gagatgctga ccctgttccg ctggctgctg aggctgacga ttgcgctgat cgtcgtgctg
      961 gtgctggccg tggtgctggc gtggtatttc ttcgtccgct cgttgccaga ctacgacgcg
     1021 acgctgaccg tcagcggcat ttcggccccg gtcgagatcg tgcgttcgac cgaagacgtg
     1081 cccaacatct tcgggcagac cgacgaggat gtgttcttcg ccctgggcct ggcccatgcc
     1141 caggaccggc tgttccagat gaccctgctg cgccgcgcgg cccagggccg
//
LOCUS       DTVW01001315            3210 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_817417, whole
            genome shotgun sequence.
ACCESSION   DTVW01001315 DTVW01000000
VERSION     DTVW01001315.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3210)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3210)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3210
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_817417"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..736)
                     /locus_tag="EYO87_17465"
     CDS             complement(<1..736)
                     /locus_tag="EYO87_17465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_386566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HIC67746.1"
                     /translation="MMKKLMLSAGALALIAGAAQAAEDLTLQLKWVTQAQFAGYYVAK
                     DKGFYDEEDLNVNIKPGGPDIAPTQVLAGGGADVTVEWMPAALAAREKGLPIVNIAQP
                     FKKSGMMLTCLKESGITDPKTDFKGKTLGVWFSGNEYPFLSWMNTLGLSTDGGPDGVT
                     VLKQGFNVDPLLQKQAACISTMTYNEYGQVLDAGLTPEDLVTFKYEDQGVATLEDGLY
                     TLEQNLQDPAMVDKLARFVRASMKGWT"
     gene            complement(757..1599)
                     /locus_tag="EYO87_17470"
     CDS             complement(757..1599)
                     /locus_tag="EYO87_17470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_353253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HIC67747.1"
                     /translation="MTLLKILLVWLAGWALNIWLARFDTRTTRLLVAVIFGATILILW
                     EMVVRLYAVPSVILPAPSQIAAGFAANTAILWTDFVQTIVKGALSGWLIGALSAILTA
                     IAIDRSPFLQRGLLPIGNFVAALPIVGIAPILVMWFGFDWQSKAAVVVVMVFFPILVN
                     MVAGLAATDRMQRDLMATWAAPYGASLWKLRLPAAMPFLFNGLKITTTLALIGAIVAE
                     FFGSPTRGMGFRIATAVGRLELPLVWAEILVAAIAGSLFYGIVALIEKKVTFWHPSQR
                     NQRG"
     gene            complement(1596..2477)
                     /locus_tag="EYO87_17475"
     CDS             complement(1596..2477)
                     /locus_tag="EYO87_17475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018001642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HIC67748.1"
                     /translation="MLRRAAKGRTLPVLAVLLAIVAIWYAGAVGLNAQWVRDQAARSE
                     TVLSTGEFVVRTLSLDRPVLPAPHQVAAGLWDGIAGQKITSKRSLVWHGWVTLSATLA
                     GFAIGTAAGILLAVGIVHNRAMDQSVMPWAVASQTVPILAIAPMVIVVLASAGITGLL
                     PKAVIAAWLSFFPVLVGMVKGLRTPDAMQLDLMKSWSASPSQIFWRLRLPSSMPYLFA
                     SLKVGVAAALVGTIVGELPAGASSGLGARLLSGSYYGQTVQIWSALFAAAALAAGLVI
                     AIGAVEKIALRRMGLAR"
     gene            complement(2509..>3210)
                     /locus_tag="EYO87_17480"
     CDS             complement(2509..>3210)
                     /locus_tag="EYO87_17480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018301666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIC67749.1"
                     /translation="DVDLTIGQGDFVSFIGPSGCGKTTLLRAIAALETPTEGRLSVNG
                     MEPDAARKARAYGYVFQAPGLYPWRTISGNISLPLEIMGFPRADRRQRTARVLELVDL
                     AGFGAKYPWQLSGGMQQRASIARALAFDADILLMDEPFGALDEIVRDRLNEALLDLWA
                     KTGKTIAFVTHSIPEAVYLSTRIVVMSPRPGRITRIIDSSLPRDRPLDIRDTPDFIAL
                     AHEVREALRDGHGDD"
BASE COUNT          595 a         1089 c         1012 g          514 t
ORIGIN      
        1 aggtccagcc cttcatgctg gcgcgcacga accgggccag cttgtccacc atcgccggat
       61 cctgaagatt ctgctccagc gtatacaggc cgtcctccag cgtggcgacg ccctgatcct
      121 cgtatttgaa ggtcaccaga tcttcgggcg tcagccccgc atccagaacc tgtccgtatt
      181 cgttataggt catggtgctg atgcaggcgg cctgcttttg cagcagcgga tcgacgttga
      241 agccctgttt caggacggtg accccgtcgg gtccgccatc ggtggacagg cccagcgtgt
      301 tcatccagga caggaacgga tattcgttcc ccgagaacca gacgcccagc gtcttgccct
      361 tgaaatcggt cttgggatcg gtgatgccgc tttccttgag acaggtcagc atcatgccgg
      421 atttcttgaa cggctgggcg atgttgacga tcggcaggcc cttttcgcgt gcggccaggg
      481 ctgcgggcat ccattcgacg gtgacatcgg cgccgccgcc ggccagaacc tgcgtcggcg
      541 cgatgtccgg tccgcccggc ttgatgttga cgttcagatc ctcttcgtcg tagaagccct
      601 tgtccttggc cacgtaatag cccgcgaact gcgcctgcgt gacccatttc aattgcaggg
      661 tcaggtcttc cgccgcctgg gcggcgccgg cgatcagcgc aagggcgccg gccgaaagca
      721 tcagtttctt catcatacac ctctctgttg gagcggtcag ccccgttgat tgcgctgcga
      781 cgggtgccag aacgtcacct tcttctcgat cagcgcgaca atgccataga acagcgatcc
      841 ggcgatggcc gccacaagga tttccgccca gaccagcggc aattccagcc gcccgacggc
      901 agtcgcgatg cgaaagccca tcccccgggt cgggctgccg aagaattcgg caacgatggc
      961 accgatcagc gccagcgtcg tggtgatctt caacccgttg aacaggaacg gcatcgcggc
     1021 cggcaggcgc agcttccaca ggcttgcgcc atagggcgcg gcccaggtcg ccatcaggtc
     1081 gcgctgcatc cggtcggtgg cggccagtcc cgcgaccatg ttcaccagga tcgggaagaa
     1141 gaccatgacc acgaccacgg cggccttgga ttgccagtcg aagccgaacc acatcaccag
     1201 aatgggtgcg atcccgacga tgggcagggc ggcgacaaaa tttccgatcg gcagcagccc
     1261 gcgctgcaga aaagggctac ggtcgatggc aatggcggtc aggatcgccg acagggcgcc
     1321 gatcagccag ccgctgagcg cgcccttgac gatggtctgc acgaaatcgg tccacaggat
     1381 cgcggtattg gcggcaaaac cggcagcgat ctggctgggc gccggcagaa tgaccgaggg
     1441 tacggcataa agccgcacga ccatctccca caggatcagg atcgtcgcgc cgaagatcac
     1501 cgcgacgaga agacgtgtcg ttctggtgtc gaaccgggcc agccagatgt tcagcgccca
     1561 gccggccagc cagaccagaa ggatcttcag cagcgtcatc gggccagccc catccggcgc
     1621 agagcgatct tctcgaccgc gccgatcgcg atcaccagcc cggcagccag tgctgccgcg
     1681 gcaaaaagcg ccgaccagat ctgcaccgtc tgcccgtaat agctgcccga cagcaggcgt
     1741 gcgcccaggc cggaactggc gcccgccggc aattcgccca cgatggtgcc gaccagcgcc
     1801 gccgccacgc ccaccttcag gctggcgaac agatagggca tcgacgaagg cagccgcagc
     1861 cgccagaaaa tctgcgaagg cgaggccgac cagcttttca tcagatccag ctgcatcgcg
     1921 tcgggtgtcc tcagcccctt taccatcccg accaggaccg ggaagaatga cagccaggcc
     1981 gcgattaccg ccttgggcag aagcccggtg atccccgcgc tggcaaggac gacgatcacc
     2041 atcggcgcga tggccaggat cggcacggtc tggctggcca ccgcccaagg catcaccgac
     2101 tggtccatcg cgcggttgtg cacgatgccg accgccagca ggatccccgc cgcggtgccg
     2161 atggcaaagc ccgccagcgt cgccgacagc gtgacccagc cgtgccagac aagactgcgt
     2221 ttcgaggtga tcttctgccc cgcgatcccg tcccacagac cggcggccac ctgatgcggc
     2281 gcgggcagga cggggcgatc caggctcagc gtccggacga cgaattctcc agtgctcagc
     2341 accgtctcgc tgcgcgccgc ctgatcccgc acccattgcg cgttcaggcc gacggcgccg
     2401 gcataccaga tcgcgacgat ggccagcagg acggccagga cgggcagggt gcggcccttg
     2461 gcggcccggc gcagcattcc tccgccgcgc atctctccga tggcggcgtc agtcatcgcc
     2521 gtgcccgtcc cgcagcgcct cgcggacctc gtgcgccagc gcaatgaagt cgggcgtgtc
     2581 gcggatgtcc agcgggcgat cgcgcggcag ggaactgtcg atgatccggg tgatccgccc
     2641 cggccgcggc gacatgacga cgatgcgcgt ggacagatag acggcttcgg ggatcgagtg
     2701 ggtcacgaaa gcgatggtct ttccggtctt ggcccacaga tccagcagtg cctcgttcaa
     2761 ccggtcgcgg acgatctcgt caagcgcgcc gaagggttcg tccatcaaca ggatatcggc
     2821 atcgaaggcc agcgcgcggg cgatgctggc ccgctgctgc atcccgccgg acaattgcca
     2881 cggatatttc gccccgaacc cggccagatc gaccagttcc aggacgcggg ccgtccgctg
     2941 ccgccggtcg gcgcgtggaa accccatgat ctcaagcgga agggagatgt tccccgaaat
     3001 cgttcgccac ggataaagcc ccggcgcctg gaacacatag ccataggccc gggccttgcg
     3061 cgcggcatcc ggttccatgc cgttgaccga caaccgtccc tcggtcggtg tctccagcgc
     3121 ggcgatggcg cgcagaagcg tggtcttccc gcagcccgag gggccgatga agctgacgaa
     3181 atcgccctgg ccgatggtca ggtcgacatc
//
LOCUS       DTVW01001316            1048 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_819803, whole
            genome shotgun sequence.
ACCESSION   DTVW01001316 DTVW01000000
VERSION     DTVW01001316.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1048)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1048)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1048
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_819803"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            1..75
                     /locus_tag="EYO87_17485"
     tRNA            1..75
                     /locus_tag="EYO87_17485"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:1.23"
                     /anticodon=(pos:33..35,aa:Thr,seq:cgt)
     gene            300..953
                     /locus_tag="EYO87_17490"
     CDS             300..953
                     /locus_tag="EYO87_17490"
                     /inference="COORDINATES: protein motif:HMM:PF07589.9"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PEP-CTERM sorting domain-containing protein"
                     /protein_id="HIC67750.1"
                     /translation="MITMSIRTISAGLVVAMLSGGAASAATIVQNGSFEDVAGLAGGG
                     TNRGGYGVYDAIPGWTRGDGAGIELQNNATLGTHDAQDGNWYVELDSDSNSSMYQDIT
                     FASAGSYLLSFFYSPRTATQNDNGIGYSLGDKVDGLIDAVYQSPATWTQVTKSFTVDA
                     GEVLRLSFFAGGLSNSLGGFVDNVSIAPVPLPGSLLLLGGALAGSGAFASRRRKKAA"
BASE COUNT          181 a          325 c          326 g          216 t
ORIGIN      
        1 ccggtgtagc tcagctggta gagcacgtca ttcgtaatga tggggtcggg ggttcgagtc
       61 ccttcaccgg caccagaaat ccgcccggat caggtcgggc agggccgtaa tccggttgct
      121 ccgacctcgt gccgagagcc gtttcgcaga ttccccgcgc cgcgcgatcc agccggattt
      181 cggttggaca tgccgtttat ggcgtgattt gccactttcc taacaattcg gaaaaggtta
      241 acattcccgt gaagcctgcg gcatgttgcc gctctgcttt caccatttga cccagtagga
      301 tgattaccat gtcgatcaga accatttccg ccggtcttgt cgtggccatg ctgtcaggcg
      361 gtgccgcctc tgccgccacg attgtccaga acggcagttt cgaagacgtc gcgggcctgg
      421 ccgggggcgg caccaacagg ggcggctacg gcgtctatga tgcgattccc ggatggaccc
      481 gcggcgacgg ggccggaatc gaactgcaga acaatgccac gctgggcacg catgacgcgc
      541 aggatggcaa ctggtatgtc gagctggaca gcgattccaa ctcgtccatg tatcaggaca
      601 tcaccttcgc cagcgccggt tcctatcttc tgtcgttctt ctattcgccg cgcaccgcga
      661 cccagaacga caatggcatc ggatacagtc tgggcgacaa ggtcgatggc ctgatcgatg
      721 ccgtctatca atcccccgcg acatggacgc aggtgacgaa gtcgttcacc gtggacgccg
      781 gcgaggtgct gcgcctgtcc ttctttgccg gcggtctcag caacagcctc ggcggtttcg
      841 tcgacaatgt gtcgattgcg ccggtgccgc tgccgggctc gctgctgctt ctgggcggtg
      901 cgcttgccgg aagtggcgct tttgcgtcgc gccgccgcaa gaaggccgcc tgagcctgcc
      961 acgatcccga aaaacagcga acgcccgccg atcatccggc gggcgtattc attggctgcc
     1021 ttggtgcggg cggcgggaat cgaacccg
//
LOCUS       DTVW01001317            1247 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_831821, whole
            genome shotgun sequence.
ACCESSION   DTVW01001317 DTVW01000000
VERSION     DTVW01001317.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1247)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1247)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1247
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_831821"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..445)
                     /locus_tag="EYO87_17495"
     CDS             complement(<1..445)
                     /locus_tag="EYO87_17495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007798688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter permease"
                     /protein_id="HIC67751.1"
                     /translation="MDSDKTTDAAMPAEHPAAQTACAPPPLPGQTLIRAIVMAMGALG
                     VVMAINQQFLLNLFGFQPLGNAYLYYLIGIFLAVAFLLLPVSTLHPRRLWWINPILAV
                     AALVGAGWLGMHGLDIIQKGWEYDAPPMADVMASVLIVLVLEGVRR"
     gene            complement(516..>1247)
                     /locus_tag="EYO87_17500"
     CDS             complement(516..>1247)
                     /locus_tag="EYO87_17500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007798685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TAXI family TRAP transporter solute-binding
                     subunit"
                     /protein_id="HIC67752.1"
                     /translation="ADARGKRIAFVAGNPSVNVKCEAILAFGGLTLDDVEVVTFPTYA
                     AAMSSMTRNESDATCTTPTTSQLYELAESPRGIHYAPLEADNTAGWEGLLKVLPIMGP
                     SDEDVAAGLPEGEIAKMAAYRYPVITTTAEKTADEVYNFIKALDESYDLYKDGTATMP
                     RWTLEKSGKPAIDVPFHEGAIRYLKEKGIWTDEDDAWNAKRIERMDALLAAWDEFKPQ
                     NEGLSDEEFAEAWMAKRAEVVAGLN"
BASE COUNT          214 a          389 c          405 g          239 t
ORIGIN      
        1 tgcgccgcac gccttcgagc accagcacga tcagcaccga ggccatcacg tcggccatcg
       61 gcggcgcatc gtattcccag cccttctgga taatgtcgag cccgtgcatc ccgagccatc
      121 cggcgccgac cagcgccgcg accgcgagga tgggattgat ccaccagagt cggcgcgggt
      181 gcagagtgct gaccggcagc aacaggaagg ccacggccag gaagatgccg atgaggtagt
      241 aaagataggc gttgcccagt ggctggaacc cgaaaaggtt caacaggaac tgctggttga
      301 tcgccatgac caccccaagg gcgcccatcg ccatgacaat cgctctgatg agggtctggc
      361 cggggagcgg gggcggcgcg catgccgtct gcgcagcggg gtgttctgcg ggcatcgcgg
      421 catcggtggt cttgtcggaa tccatggtct cttcctgatc aaggcaagaa gtgccccggc
      481 gcgcatcgcg ccggggaggt tcagggaact gcggttcagt tcaggcccgc gacgacctcg
      541 gcgcgcttgg ccatccaggc ttcggcgaac tcttcgtccg acagcccttc gttctgcggc
      601 ttgaactcat cccaagcggc cagcagcgcg tccatgcgct cgatccgctt ggcgttccag
      661 gcatcatcct catcggtcca gatgcctttt tccttgagat agcggatagc gccttcgtgg
      721 aacggcacat cgatcgcagg cttgccggac ttctccagcg tccagcgcgg catggttgcg
      781 gtaccgtcct tataaaggtc gtagctctcg tcgagcgctt tgatgaagtt atagacctca
      841 tccgcggtct tttccgcggt ggtggtgatc accggatagc gataggccgc catcttggcg
      901 atctcgcctt ccgggagacc ggcagccacg tcttcgtcag agggccccat gatcggcagc
      961 acctttagca gcccttccca tccggcggtg ttgtccgcct ccagcggcgc gtaatgaatg
     1021 ccgcgcgggc tttccgccag ttcatagagc tggctggtgg tcggcgtggt gcaggtggcg
     1081 tcagactcgt tgcgggtcat cgaggacatg gccgccgcgt aggtcgggaa ggtgacgacc
     1141 tcgacatcat cgagggtcag cccgccgaag gcgaggatgg cttcgcattt cacgttcacg
     1201 gacgggttgc ctgccacaaa ggcgatgcgc ttgccgcggg catcggc
//
LOCUS       DTVW01001318            1162 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_836370, whole
            genome shotgun sequence.
ACCESSION   DTVW01001318 DTVW01000000
VERSION     DTVW01001318.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1162)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1162)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1162
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_836370"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1137)
                     /locus_tag="EYO87_17505"
     CDS             complement(<1..1137)
                     /locus_tag="EYO87_17505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013535048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIC67753.1"
                     /translation="MCNGLAQLADALAVDLRQVAQLLFDRLQLLRLGALQTRPEGVSD
                     WWQSGLADYLGLLIAAELGLALASDLIGRLVGYADSLLQERLVISLSVRLMDHAADLD
                     LASFEDAGFQDRLDRARRQTMGRIPLVGQMMQQLQDGVTVASFGAGLIAYNPWLVILL
                     AVALIPTLIGQLHFNAMLYQMNWRRAPERRERDYLRMIGATSESAKEVKIFGLNRFLR
                     DRYRELAERFYAENRAINRRQLAVMAALTGIGTLFYYGAYLWIIARTLTGALSLGDLT
                     FLSGSFLRLRGLIEGLLTSFSDMAGQALYLDDLYRFFDEVPAIASPADALPVPLPIRH
                     GITFEDVGFRYPGAERWAVRHLSFHLRAGETVALVGENGAGKTTI"
BASE COUNT          238 a          381 c          378 g          165 t
ORIGIN      
        1 gatcgtggtc ttgccggcgc cgttctcgcc caccagcgcc acggtttcgc ccgcgcgcag
       61 gtgaaaggac agatgccgca cggcccagcg ttccgcgccc ggatagcgga agccgacatc
      121 ctcgaaggtg atgccgtgcc ggatgggcag gggaaccggc agggcatccg cgggggatgc
      181 gatggcgggc acctcgtcga agaaacggta gaggtcgtcc agatacagcg cctgtcccgc
      241 catgtcggaa aacgaggtca gcaagccctc gatcaggccg cgcaggcgca ggaagctgcc
      301 cgacaggaag gtcaggtcgc ccagcgacag ggcgccggtc agggtgcggg cgatgatcca
      361 cagataggcg ccgtaataga acagcgtgcc gatgcccgtc agcgccgcca tgaccgcaag
      421 ctggcggcga ttgatggcgc ggttctcggc atagaagcgt tcggccagtt cccgatagcg
      481 gtcgcgcagg aaccggttga gaccgaagat cttgacttcc ttggccgatt ccgaggtcgc
      541 gccgatcatc cgcagataat cgcgttcccg ccgttcgggt gcgcggcgcc agttcatctg
      601 gtaaagcata gcgttgaaat gcaactgtcc gatcagcgtc gggatcagcg ccaccgccaa
      661 caggatcacc agccagggat tataggcgat caggcccgcc ccgaaactgg ccaccgtcac
      721 gccgtcctgc aattgctgca tcatctggcc caccagaggg atacggccca tggtctggcg
      781 gcgggcgcgg tccagccggt cctgaaaacc ggcatcctcg aaactggcca ggtccagatc
      841 ggcggcgtgg tccatcagcc gcaccgacag agagatgacc agcctttcct gcaacaggct
      901 gtcggcgtag ccgaccagac gcccgatcag gtccgaggcc agcgcaaggc ccagttccgc
      961 cgcgatcagc aggcccagat aatccgcaag gcccgattgc caccaatccg agaccccctc
     1021 ggggcgggtt tgcagcgcgc ccaggcgcag caactgcagg cgatcgaaga gaagctgcgc
     1081 gacctgcctg aggtcgacag cgagcgcgtc agccaactgc gccaagccat tgcagatggc
     1141 agctacaaac cggacagcag cc
//
LOCUS       DTVW01001319            1039 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_837045, whole
            genome shotgun sequence.
ACCESSION   DTVW01001319 DTVW01000000
VERSION     DTVW01001319.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1039)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1039)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1039
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_837045"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..939)
                     /locus_tag="EYO87_17510"
     CDS             complement(<1..939)
                     /locus_tag="EYO87_17510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_354638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HIC67754.1"
                     /translation="MLVNGKWVENWQPVQKADEQGRFVRQVSEFRNWITTDGRPGPTG
                     EGGFEAEAGRYRLYVALICPWASRTLIARRLKGLADLIPVTVVNPTLTDQGWRFGGYP
                     GADEDPLYGSSYMHELYTRADPHVSGRATVPVLWDMKRGVMVNNESADIVRMFDTAFD
                     AIAPSDLRLYPADLAEEIDVLNRQVYESLNNGVYKAGFASSQEAYDEAVSGVFAMLDQ
                     LETRLGDGRPYLCGDTLTETDIRAFVTLIRFDAAYHGLFKTNCRQIADYPHLSAHMER
                     VLRLPGVAETVNMDHITRGYYSIKALNPTGIRPTGPA"
BASE COUNT          194 a          333 c          318 g          194 t
ORIGIN      
        1 cgccgggccg gtcggccgga tgcccgtcgg attcagcgcc ttgattgaat agtagccgcg
       61 cgtgatgtga tccatattga ccgtctccgc gacgcccggc aaccgcagca cacgctccat
      121 atgcgccgaa agatgcgggt aatccgcgat ttgccggcag ttggtcttga atagtccgtg
      181 ataggccgcg tcgaaccgga tgagcgtcac gaaagcacgg atatcggttt cggtcagcgt
      241 gtcgccgcac agatacgggc ggccgtcacc gaggcgcgtc tcgagctggt caagcatcgc
      301 gaacaccccc gagacggctt cgtcataggc ctcctggctg gaggcgaatc cggccttgta
      361 gaccccgtta ttgaggcttt cgtaaacctg cctgttcagc acgtcgatct cttcggccaa
      421 atcggctgga tagagacgca gatcggatgg ggcgatcgcg tcgaaggcgg tatcgaacat
      481 gcgcacgata tcggcgcttt cgttgttcac catgacgccg cgcttcatgt cccacagcac
      541 cggcacggta gcgcggcccg agacatgggg atcggcacgg gtatagagtt catgcatgta
      601 actcgacccg tatagcgggt cctcatccgc gcccggatag ccgccgaacc gccagccctg
      661 atcggtcagc gtcgggttga ccaccgtgac cgggatcaaa tccgcaagcc ccttgaggcg
      721 ccgtgcgatc agggtgcgcg aggcccaggg gcagatcagc gcgacataga gccggtaccg
      781 cccggcctcg gcctcgaaac caccctcgcc cgtggggccg ggacgcccgt cggttgtgat
      841 ccagttccgg aactccgaaa cctggcgcac gaaacgcccc tgttcatcgg ccttctggac
      901 aggctgccag ttctcgaccc attttccatt cacaagcatg tcttgtctcc tttattatta
      961 tcaggttcgc aatgcgcgtc actgcgccag cgcgaaggcg gtgccccagg gatcggcaaa
     1021 gcggtcgccg ccaaggcgc
//
LOCUS       DTVW01001320            2041 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_839931, whole
            genome shotgun sequence.
ACCESSION   DTVW01001320 DTVW01000000
VERSION     DTVW01001320.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2041)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2041)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2041
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_839931"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1425
                     /locus_tag="EYO87_17515"
     CDS             <1..1425
                     /locus_tag="EYO87_17515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011747156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na/Pi cotransporter family protein"
                     /protein_id="HIC67755.1"
                     /translation="ALMTASFVERDLVRGRMAQIALLGANVGTALTAWIVATGIEALS
                     PLLLLIGYVMRRQRLPAISGTGLALIGVGLMLLSLTLLNNATSPLRDSPTMGAFLTML
                     DGAWPVAVVIAAALAAVCASSLAAIMLILTLGLSPGLTVAMVLGANLGGAIPPVLATL
                     ASRTAARRVTAGNLVVRALGCVAILPFAGPVGRALERLPLPQTGLAVEAHLLLNIALA
                     AVIWPFSGLIWSAVSRLLPDKPDEDDRTRWLTEAALETPALALAGASREALAIGDIVQ
                     RMLVQTHNAFSTSDTAPLAEVKALDDRVDRRQQEVKTYLSRLGQNATEQERRRSLNII
                     DYVVNLEHVGDIIDRNLAAELRKRSGLGLRFSDAGYKELESLFLLTLENLSTAQTVFM
                     TGDRALARQLMEVKVDIRNMERQSAQRHLIRLREGHEQSRQTSSLHLDILRDLKRINA
                     HLVAVAHPILDEEGLLIDSRLKTG"
     gene            1496..>2041
                     /locus_tag="EYO87_17520"
     CDS             1496..>2041
                     /locus_tag="EYO87_17520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic phosphate transporter"
                     /protein_id="HIC67756.1"
                     /translation="MADKDFEARHLETLDRDLGRFSNLELATAYVARPLVGPGIALVF
                     IMLAGLAAALFLGQSSQGLIVVLAAVFGAYMALNIGANDVANNMGPAVGANALTMGGA
                     IIIAAIFESAGALIAGGDVVSTIAKGIIAPEVLGDTTIFIWAMMAALLSSALWVNLAT
                     WIGAPVSTTHSVVGGVMGAGIA"
BASE COUNT          322 a          673 c          682 g          364 t
ORIGIN      
        1 gcgctgatga ccgcatcctt cgtcgaacgc gatctggtgc gcggacgcat ggcgcagatc
       61 gcccttctgg gcgcgaatgt cggcaccgcc ctgactgcct ggatcgtggc cacggggatc
      121 gaggccctgt cgccgctgct gttgctgatc ggctatgtga tgcggcggca gagattgccg
      181 gccatttcgg gcacgggtct tgcactgatc ggcgtcgggc tgatgctgtt gtcgctgacg
      241 ctgctgaaca atgcgacctc accgctgcgc gattctccga cgatgggcgc cttcctgacg
      301 atgctggacg gtgcctggcc cgtggccgtg gtcatcgcgg cggctcttgc ggcggtctgc
      361 gcctcgtcgc tggcggcgat catgctgatc ctgacactgg ggctgtcgcc cggcctgacc
      421 gtcgcgatgg tgctgggggc caatctgggc ggcgcgatcc cgccggtact ggcgacgctg
      481 gcatcgcgga cagccgcccg gcgcgtgacc gccggaaacc ttgtcgtgcg cgccctgggc
      541 tgcgtggcga tcctgccctt cgcgggtccg gtcggcaggg cgctggaacg cctgccgctg
      601 ccacagaccg gccttgcggt cgaggcgcat ctgctgctga atatcgccct ggcggcggtg
      661 atctggccgt tcagcggcct gatctggtcc gccgtcagcc gtctgctgcc ggacaagccg
      721 gacgaggacg accgcacgcg atggctgacc gaggccgcgc tggaaacccc ggcgctggcg
      781 ctggcgggcg ccagccgcga ggccctggcg atcggcgaca ttgtccagcg gatgctggtc
      841 cagacacata acgccttttc gaccagcgac acggcaccgc tggccgaggt caaggcgctg
      901 gacgatcgcg tcgatcgccg gcagcaggag gtcaagacct atctcagccg cctggggcaa
      961 aacgcgaccg aacaagagcg gcgtcgatcg ctcaacatca tcgattacgt ggtcaacctc
     1021 gaacatgtcg gcgacatcat cgaccggaat ctcgcggccg aattgcgcaa acgctccggt
     1081 cttggcctgc gattctccga tgcgggctac aaggaactgg aatcgctgtt ccttctgaca
     1141 ctggaaaatc tttctaccgc gcagaccgtc ttcatgaccg gcgatcgcgc gctggcgcgg
     1201 caattgatgg aggtcaaggt cgatatccgc aacatggagc ggcaatcggc gcagcggcat
     1261 ctgatccgcc tgcgtgaggg ccacgagcag agccggcaga cctcgtcgct gcatctggac
     1321 atcctgcgcg acctcaagcg gatcaacgcc catctcgtcg ccgtggccca tccgatcctc
     1381 gacgaagagg gcctgctgat cgacagccga ctcaagaccg gctgaggcgg tgcgacaagc
     1441 ttgatctggc ccgcaaagcc ccctaggcag cccgcgacaa ccggaaaggc acggcatggc
     1501 cgacaaggat ttcgaagcgc gccacctcga gacactggac cgcgatctgg gccggttctc
     1561 gaatctggaa ctggctacgg cctatgtcgc gcgcccgctt gtcgggcccg gtatcgcgct
     1621 ggtcttcatc atgctggccg gactggccgc agcactgttt ctgggccagt ccagtcaggg
     1681 cctgatcgtg gtgctggcgg cggtcttcgg cgcctatatg gcgctgaata tcggggccaa
     1741 cgacgtcgca aacaacatgg gccccgcggt cggtgccaat gccctgacca tgggcggcgc
     1801 gatcatcatc gccgccattt tcgaaagcgc cggtgcgctg atcgcgggcg gcgatgtcgt
     1861 ttcgaccatc gcaaagggca tcatcgcccc cgaggtgctg ggcgatacca cgatcttcat
     1921 ctgggccatg atggcggcgc tgctgtcctc ggcgctctgg gtgaacctgg ccacctggat
     1981 cggcgcgccg gtctcgacca cgcattccgt cgtcggcggc gtcatgggcg cgggcatcgc
     2041 c
//
LOCUS       DTVW01001321            1828 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_841044, whole
            genome shotgun sequence.
ACCESSION   DTVW01001321 DTVW01000000
VERSION     DTVW01001321.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1828)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1828)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1828
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_841044"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..494)
                     /locus_tag="EYO87_17525"
     CDS             complement(<1..494)
                     /locus_tag="EYO87_17525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009826591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="choline ABC transporter permease subunit"
                     /protein_id="HIC67757.1"
                     /translation="MDWLTGLVTDNKIPVGATAKAVFDWLNANAAWLFNALSAAMDWL
                     IGRILAGLEFPSPFAFIAIAVALTFALQRNWKTCLLVALGLLFILNQGYWNEMQQSLT
                     LVLAACIVCMAIGVPIGIAAAHRPRLYSWMRPVLDLMQTLPTFVYLIPAIVFFGIGMV
                     PGLLA"
     gene            complement(610..1554)
                     /locus_tag="EYO87_17530"
     CDS             complement(610..1554)
                     /locus_tag="EYO87_17530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002826876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="choline ABC transporter substrate-binding
                     protein"
                     /protein_id="HIC67758.1"
                     /translation="MNQTFIAAALALGTALSSGTAYAQESGQCRKVTFSDVGWTDITA
                     TTALASTVLQAIGYDTETKILSVPVTYTALSTDDVDIFLGNWMPTMEADIAPYRDAGT
                     VDTVRTNLTGAKYTLATNQAGADLGIDDFSKIAGQKDALDGKIYGIEPGNDGNRLLLE
                     MVANDKFGLGTFEVVESSEQGMLAQVGRAVNAGKPIVFLGWEPHPMNAQFKMTYLSGG
                     DDVFGPDFGGAEVRTNTRAGYVSECPNVGKFLENLEFTLPMENEVMGKILNDGQDPMA
                     AAKEWLQANPDAAKPWLDGVTTVDGNDAQAALDAALQG"
     gene            1643..>1828
                     /locus_tag="EYO87_17535"
     CDS             1643..>1828
                     /locus_tag="EYO87_17535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR family transcriptional regulator"
                     /protein_id="HIC67759.1"
                     /translation="MPKLGAEPIRKAALINATIFEVGRAGSLDVTVAQIARRAGMSPA
                     LAHHYFGSKDQLFLQAMR"
BASE COUNT          328 a          596 c          563 g          341 t
ORIGIN      
        1 gccagaaggc ccggcaccat gccgatgccg aaaaagacga tggccgggat caggtagacg
       61 aaggtcggca gcgtctgcat cagatcgaga accgggcgca tccatgaata cagccgcggc
      121 cgatgcgcgg cggcgatgcc gatgggcacg ccgatcgcca tgcagacgat gcaggccgcc
      181 agaaccagcg tcagcgattg ctgcatctcg ttccagtaac cctggttgag gatgaacagc
      241 agcccaagcg cgaccagaag gcaggtcttc cagttgcgtt gcaacgcaaa ggtcaacgcg
      301 acggcgatgg cgatgaaggc gaagggagag ggaaattcca gcccggccag gatgcgcccg
      361 atcagccagt ccatcgcggc ggacagcgcg ttgaacagcc aggcggcatt ggcgttcagc
      421 cagtcgaaga cggccttggc cgtggccccg accgggatct tgttgtctgt caccagtcct
      481 gtcagccaat ccatcaatgg ttccctcgtt tcggcgcgcc tgtctggcgg catggccccg
      541 cgccggttcc ggcatggcgc cccgccgcct cgggcaaggc ggcggggccg ttcactgttg
      601 ttgcgcggct cagccctgaa gcgccgcgtc cagcgccgcc tgcgcgtcgt tgccgtccac
      661 cgtggtcacg ccgtccagcc agggctttgc ggcatcggga ttggcttgca gccattcctt
      721 cgcggcagcc atcgggtcct gtccgtcgtt caggatcttg cccatgacct cgttttccat
      781 cggcagggtg aattccaggt tctccaggaa cttgccgaca ttgggacatt cgctgacata
      841 gcctgcgcgc gtgttcgtgc gcacctcggc gccgccgaaa tcggggccga acacgtcgtc
      901 gccgcccgac agataggtca tcttgaactg ggcgttcatc ggatgcggct cccatcccag
      961 aaagacaata ggcttgccgg cattcaccgc gcgcccgacc tgggccagca ttccctgttc
     1021 gctggattcg accacctcga acgtgcccag gccgaacttg tcattggcca ccatttccag
     1081 aagcagccga ttgccgtcat tgccgggctc gatgccatag atcttgccgt ccagcgcgtc
     1141 cttctgcccg gcgatcttgc tgaaatcgtc gatgcccaga tcggcaccgg cctggttcgt
     1201 ggccagggtg tatttggcgc cggtcaggtt ggtgcgcacc gtatccaccg tgcccgcatc
     1261 gcgatagggg gcgatgtcgg cctccatcgt tggcatccag ttgcccagga aaatatccac
     1321 atcatcggtc gacagcgcgg tataggtcac cggcaccgac aggatcttgg tctcggtatc
     1381 atagccgatc gcctgcagca cggtcgaggc cagcgccgtc gtcgcggtga tgtcggtcca
     1441 gcccacatcc gagaaggtca ccttccggca ctggccggat tcctgcgcat aggcggtccc
     1501 gctgctcagc gcggtgccaa gcgccagcgc ggctgcgatg aatgtctgat tcatgtctga
     1561 ctccctgttc ttgattgacc agtcaattaa aggtgggtta gacacgaaaa gcaaccggaa
     1621 ttccagcccg tcaggtccgt tcatgcccaa actcggcgcc gagcctatcc gaaaagccgc
     1681 gttaatcaac gccacgatct tcgaggtcgg gcgcgcgggc tcgctggacg tgaccgtggc
     1741 ccagatcgcg cgccgggccg gcatgtcgcc ggccctggca catcactatt tcggctcgaa
     1801 ggaccaactg ttcctgcaag cgatgcgc
//
LOCUS       DTVW01001322            1814 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_841101, whole
            genome shotgun sequence.
ACCESSION   DTVW01001322 DTVW01000000
VERSION     DTVW01001322.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1814)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1814)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1814
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_841101"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..406)
                     /locus_tag="EYO87_17540"
     CDS             complement(<1..406)
                     /locus_tag="EYO87_17540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015918212.1"
                     /note="with OppABDF is involved in the transport of
                     oligopeptides of up to 5 amino acids into the cell;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter permease"
                     /protein_id="HIC67760.1"
                     /translation="MVIEERKMQSLAARLSQDEVRGRSPWADARKRFVRNKAAMAGLI
                     ILILVGLFALLGEYVAAWSNDELDFTVMGQVAQMGMPSLQNGHYFGTDDLGRDLFART
                     VQGTQISLMVGIVGAAIAVVVGTLYGATAGYVG"
     gene            complement(410..1333)
                     /gene="oppB"
                     /locus_tag="EYO87_17545"
     CDS             complement(410..1333)
                     /gene="oppB"
                     /locus_tag="EYO87_17545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010398359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide ABC transporter permease OppB"
                     /protein_id="HIC67761.1"
                     /translation="MFAYIMRRLAVAIPTLLLLIVFSFVLMHMAPGGPFTQERALPPQ
                     VIANLNAKYGLDQPLWRQIASYLWGIVANFDFGPSFVYPDRTVNQLIAAGFPVTLTYG
                     TLSFIAAVVVGVGLGVVAAIWHNGFLDYLAVGISIGAQVLPNFVMAPILVLVFTLWYR
                     MLPGGGWSFEDPSYWIMPVIALGTSYMASIARITRSSMLEVLGSNHIRTARAKGMPEH
                     RVILRHALKPALLPVISYLGPVFVSMITGSVVIDVYFSTGGIGKAFVDSALNRDYAVM
                     MGVTILVGALTILFNLVVDILYAWIDPKIRY"
     gene            complement(1427..>1814)
                     /locus_tag="EYO87_17550"
     CDS             complement(1427..>1814)
                     /locus_tag="EYO87_17550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005611174.1"
                     /note="is involved in the transport of the murein peptide
                     L-alanyl-gamma-D-glutamyl-meso-diaminopimelate; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="oligopeptide ABC transporter substrate-binding
                     protein OppA"
                     /protein_id="HIC67762.1"
                     /translation="LGVNVTLNNVEWKVHTDRLQNQDFDVARYAWCGDYNEASTFLDW
                     FRTDGYNSGKWSNAEYDKLMADSKTAEDTTPLYKRAEEILAEEVPAAFVYHYAKVDMI
                     SPRIKGLPTENVLNTWYAKDLYRLAD"
BASE COUNT          381 a          562 c          559 g          312 t
ORIGIN      
        1 cgcccacata gcccgccgtc gcgccgtaaa gcgtgccgac gacaaccgcg atcgcggcgc
       61 cgacgatgcc gaccatcagc gaaatctgcg tgccctgaac ggtgcgcgcg aacaggtcgc
      121 ggcccagatc gtcggtgccg aaataatgtc cgttctgcaa cgagggcatg cccatctgcg
      181 ccacctggcc catgacggta aagtccagct cgtcattcga ccaggcggcg acatattcgc
      241 ccagcagcgc gaaaagcccg accaggatca ggatgatcaa cccggccatc gccgccttgt
      301 tgcgaacgaa ccgcttgcgc gcgtcggccc aggggctgcg gccgcgaacc tcgtcctgcg
      361 acaggcgggc ggccagcgat tgcatcttgc gttcttcgat gaccatggct cagtaccgga
      421 tcttcgggtc gatccacgca tagaggatat cgacgacaag gttgaaaaga atggtcagcg
      481 ccccgaccag gatcgtgacc cccatcatca ccgcgtagtc gcggttcagc gccgaatcga
      541 cgaaggcctt gccgatgccg ccggtcgaga aatagacatc gatcaccacc gatccggtga
      601 tcatcgacac gaagaccggt cccagatagc tgatgacggg cagcagcgcg ggcttcagcg
      661 cgtggcgcag gatgacgcga tgttcgggca ttcccttggc gcgggcggtg cggatatgat
      721 tcgagcccag cacctcgagc atcgaggacc gggtgatccg cgcgatcgag gccatgtagc
      781 tggtgccaag cgcgatcacc ggcatgatcc agtagctggg atcctcgaag ctccatccgc
      841 cgccgggcag catcctgtac cacagcgtga agaccagaac caggatcggt gccatcacga
      901 aattcggcag aacctgggcc ccgatcgaga tgccgacggc cagataatcc agaaaaccgt
      961 tgtgccagat cgcggcgacc acgcccagac cgacgccgac caccaccgcg gcgatgaagg
     1021 acagtgtgcc ataggtcagc gtgaccggaa aaccggccgc gatcagctgg ttcaccgtgc
     1081 gatcgggata gacgaagctg ggcccgaaat cgaaattcgc gacgatgccc cagagatagc
     1141 tggcgatctg ccgccacaga ggctgatcca gcccgtattt ggcattcaga ttggcgatga
     1201 cctgcggcgg cagcgcgcgt tcctgggtga agggaccacc cggcgccatg tgcatcagga
     1261 cgaaggaaaa gacgatcagc aaaagcagcg tcggtatcgc caccgccagt cgccgcatga
     1321 tgtaggcgaa catcggctcg gcctccctgc ggaagatggg tcaggttcta tgactgaata
     1381 ccggaagggg gcaacccctt ccggcaagag ggcggatcgg ccggcctcaa tcggccagac
     1441 gatacagatc cttggcgtac caggtgttca gcacgttttc ggtgggcagt cctttgatcc
     1501 ttgggctgat catgtccacc ttggcatagt gatagacaaa ggccgccggc acctcttcgg
     1561 ccaggatttc ctcggcccgc ttgtaaagcg gcgtggtatc ctcggcggtc ttcgaatcgg
     1621 ccatcagctt gtcgtattcg gcgttcgacc atttgccgct gttgtagccg tcggtgcgga
     1681 accagtcgag aaaggtcgag gcttcgttgt aatcgccgca ccaggcatag cgggccacgt
     1741 cgaaatcctg attctgcagg cggtcggtgt gaaccttcca ttcgacattg ttcagggtga
     1801 cgttgacgcc cagc
//
LOCUS       DTVW01001323            1541 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_843652, whole
            genome shotgun sequence.
ACCESSION   DTVW01001323 DTVW01000000
VERSION     DTVW01001323.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1541)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1541)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1541
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_843652"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..269)
                     /locus_tag="EYO87_17555"
     CDS             complement(<1..269)
                     /locus_tag="EYO87_17555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67763.1"
                     /translation="MVRPSLQSLRSAAPVLIGAALFALGLYALYTLLKPVSLADVAAQ
                     IRSTPVASLGAALGATATGYVALIFYDWFGLRFIGKRLDRGIVALG"
     gene            664..1335
                     /locus_tag="EYO87_17560"
     CDS             664..1335
                     /locus_tag="EYO87_17560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_354754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HIC67764.1"
                     /translation="MRILLAEDDAETAAYVVRGLSGEGHVVDHLTDGREALSQAMSAG
                     YDLLILDRMMPGLDGLSVLKSLRAARIDAPAILLTAMGAVDDKVAGLRSGADDYMVKP
                     FAFVELLARIDTICRRPATRDEVVELVIGELRLDLLTREAARDGQRVDLQPREFLLLK
                     HFMERPGRVQTRTVLLESVWGLQFDPKTSVVETHISRLRNKIDKPFDKHYLVTLHGVG
                     YVLQP"
     gene            1332..>1541
                     /locus_tag="EYO87_17565"
     CDS             1332..>1541
                     /locus_tag="EYO87_17565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67765.1"
                     /translation="MRRPLSWSMRFALALSAVFAIGTLSAGGLSYLFLSREMSQRLLA
                     DVRSSAESLARIASTGDRTDLDEEIR"
BASE COUNT          283 a          485 c          508 g          265 t
ORIGIN      
        1 ccaagcgcga cgatcccgcg atcaaggcgc ttgccgatga agcgcagccc gaaccagtca
       61 tagaagatca gcgcgacata acctgtcgcc gtcgcgccca gggcggcgcc aaggctcgcc
      121 accggtgtgg acctgatctg cgccgccaca tcggccaggc tgacgggctt cagcaaggta
      181 tagagcgcgt agagacccag tgcgaataac gccgccccga tcaggacggg cgccgcgctt
      241 cgcagggact gaaggctcgg tcggaccatg cgcggacacc agtttgttcg aaacgttcac
      301 ggatcgctgc gggcttaccc aaagcggggc ggacttgcca agcgtcaatg cggcctgggc
      361 ccgcttctta caaaaaagta agcccgttga aaggggtttc gccctggcga gccgctgcca
      421 ttgccaccgg ataaccgaaa attgccccgc cgcagcggaa agcaggggat gcgggccggc
      481 aacaggaccg cggttcccgc gccccgccgg ccgcgatcat gtcttcgccc gggcgccgtc
      541 ttgcgatagg cagaaggcgg gggaagacgc gggctgcgcc gcccgaatcc accggctcgg
      601 cgcgttttcc gatccggttt cggccgtcga accggggaac gacaacagag gggattcttc
      661 acgatgcgca tcctgcttgc agaagacgac gccgaaacag ccgcctatgt ggtccggggg
      721 ctgtccggcg aaggacatgt cgtcgatcat ctgaccgatg gcagggaggc gctgtcgcag
      781 gcgatgtcgg ccggatacga ccttctgatc ctggaccgga tgatgccggg acttgacggg
      841 ctttcggtgc tgaaatcgct gcgcgcggcc aggatcgacg cccctgcgat cctgctgacg
      901 gcgatgggcg cggtcgatga caaggtggcc gggcttcgca gcggcgcgga tgactacatg
      961 gtcaagccct ttgccttcgt cgaattgctt gcccggatcg acacgatctg ccgccgcccg
     1021 gcgacgcggg acgaggtcgt ggaactggtg atcggagaac ttcggctgga cctgctgacg
     1081 cgcgaggcgg cacgcgacgg ccagcgcgtc gaccttcagc ccagggaatt cctgctgttg
     1141 aaacatttca tggaacggcc gggccgcgtg cagacccgta ccgtcttgct ggaatcggtc
     1201 tgggggctgc aattcgatcc caagacaagc gtcgtcgaaa cccatatcag ccgcctgcgc
     1261 aacaagatcg acaagccctt cgacaagcat tatctggtca cgctgcacgg cgtcggctac
     1321 gtcttgcagc catgagacgg ccgctgtcct ggtcgatgcg gtttgcgctg gcattgtcgg
     1381 cggtcttcgc catcggcacc ttgtcggccg gtggtttgtc ctatcttttc ctgtcgcggg
     1441 aaatgagtca gcgccttctg gccgatgtgc gatccagcgc agaaagcctg gcgcggatcg
     1501 cgtccaccgg cgaccggacc gatcttgacg aggaaatccg c
//
LOCUS       DTVW01001324            1726 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_845889, whole
            genome shotgun sequence.
ACCESSION   DTVW01001324 DTVW01000000
VERSION     DTVW01001324.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1726)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1726)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1726
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_845889"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..684
                     /locus_tag="EYO87_17570"
     CDS             <1..684
                     /locus_tag="EYO87_17570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadA"
                     /protein_id="HIC67766.1"
                     /translation="DTVLYFEGERGHQFRILRSVKNRFGPADEIGVFEMTGAGLAEVA
                     NPSALFLSERGQPSPGSAVFAGIEGTRPVLTEVQALVAPSTLASPRRTVVGLDSGRVS
                     TILAVLEARCGIPFAGLDVFLNVAGGMRVSEPAADLAIAGALLSAREDSALPPEAVLF
                     GEISLSGALRPVAQAENRLKEAQKLGFSQAILPEGQKVEGVGSDRGGMGTRRIADLTE
                     FVGEIFGAG"
     gene            729..1349
                     /locus_tag="EYO87_17575"
     CDS             729..1349
                     /locus_tag="EYO87_17575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011750173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CvpA family protein"
                     /protein_id="HIC67767.1"
                     /translation="MDGFTIIDAVVAAVIILSAILAWSRGFVRESLAILGWIAAAILA
                     FLFAAAVRPMIAQLPVLDRFLGDSCELATIAGFAVVFALALVVFSIITPLFSSVVQRS
                     ALGGVDQGMGFLFGVARGILLVAIVFIVYDRVMTSQQVAMVENSRSAQVFERMRGQMD
                     ERIPEDAPGWIVSRYEQMVGGCGATTETVDPDTAPAQTGDAAPASN"
     gene            1486..>1726
                     /locus_tag="EYO87_17580"
     CDS             1486..>1726
                     /locus_tag="EYO87_17580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HIC67768.1"
                     /translation="MQPFLAHPFDSDRLHEECGVFGAIGMADASNFVALGLHALQHRG
                     QEAGGIVAHDPEHGFNSAHRFGYVRDNFTKTDVMAT"
BASE COUNT          258 a          559 c          587 g          322 t
ORIGIN      
        1 gataccgtgc tgtatttcga gggcgagcgc ggtcatcagt tccgcatcct gcgcagcgtc
       61 aagaaccgct tcggccccgc cgacgagatc ggcgtgttcg agatgaccgg cgcggggctg
      121 gccgaggttg ccaacccctc ggcgctgttt ctgtccgaac gcggccagcc ttcacccggc
      181 agcgcggtct ttgccgggat cgagggcacg cggccggtgc tgaccgaggt tcaggccctg
      241 gtcgcgccct ccacccttgc ctcgccgcgc cgcaccgtgg tcgggcttga cagcggccgt
      301 gtcagcacca tccttgccgt gctggaggcc cgctgcggca ttcccttcgc cgggctcgac
      361 gtgttcctga acgtcgccgg cgggatgcgg gtcagcgaac cggccgccga cctggccatc
      421 gccggcgccc tgctgtcggc gcgcgaggac agcgcgctgc cgcccgaggc ggtgcttttc
      481 ggcgaaatca gcctgtcggg cgcgctgcgc cccgtcgcgc aggccgaaaa caggttgaaa
      541 gaggcgcaga aacttggttt ttcacaggcg atcttacccg aaggccagaa ggtcgagggg
      601 gtcggatcgg atcgcggcgg catgggaacg cggcgcatcg ccgatctgac ggaatttgtg
      661 ggcgagatct tcggcgccgg ctgaaccgcc tgaaaatgca acgatatccg gcgcgggggc
      721 gggactacat ggacggtttc acgatcatcg acgcggtggt ggcggcggtc atcattcttt
      781 ccgcgatact ggcatggtcg cgcggcttcg tgcgcgaatc gctggccatc ctgggctgga
      841 tcgcggcggc catcctggcc tttctcttcg ccgctgcggt gcggccgatg atcgcccagc
      901 ttccggttct ggaccgtttc ctgggcgaca gttgcgaatt ggccacgatc gcgggcttcg
      961 cggtggtctt cgccctcgcc ctggtcgtct tctcgatcat cacgccgctg ttttcctcgg
     1021 tcgtgcaacg gtcggccctg ggcggggtgg atcagggaat gggctttctg ttcggcgtgg
     1081 cgcgcggcat ccttctggtc gccatcgtct tcatcgtcta cgaccgggtg atgaccagcc
     1141 agcaggtcgc gatggtcgaa aattcacgct cggcgcaggt gttcgaacgg atgcgcggcc
     1201 agatggacga acgtatcccc gaagatgcgc ccggctggat cgtcagccgc tacgaacaga
     1261 tggtcggcgg ctgcggcgcg acgaccgaaa ccgtcgatcc ggacaccgcc ccggcccaga
     1321 ccggtgatgc ggcgccggcc tcgaactgag gcggcgtgcc cggccatggc cgctgatgtc
     1381 ggtgatgtga cgaaaattcc gcttctgcgg atagccgggg cgtgactctg ggtccggccc
     1441 gcactacata gccctcgaca gtccaaagcc agtcaggatg ccatgatgca gccattcttg
     1501 gcccatccgt tcgattcgga ccgcctgcac gaggaatgcg gggtattcgg cgcgatcggg
     1561 atggcggatg cctcgaattt cgtcgctctc ggcctgcacg cgttgcagca tcgcgggcag
     1621 gaggccggcg gcatcgtcgc ccatgatccc gaacacgggt tcaacagcgc ccaccgcttt
     1681 ggctatgtgc gcgacaattt caccaagacc gacgtgatgg cgacgc
//
LOCUS       DTVW01001325            2040 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_856510, whole
            genome shotgun sequence.
ACCESSION   DTVW01001325 DTVW01000000
VERSION     DTVW01001325.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2040)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2040)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2040
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_856510"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1449)
                     /locus_tag="EYO87_17585"
     CDS             complement(<1..1449)
                     /locus_tag="EYO87_17585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007120130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA ligase"
                     /protein_id="HIC67769.1"
                     /translation="MTRRDARPADPLAEYNDKRNFTRTGEPIGRIPAAADDNHRFIVQ
                     KHAASHLHYDFRLQWNGVLLSWAVPKGPSSDPREKRLAVRTEDHPIDYAGFEGTIPKG
                     EYGAGTVMLWDEGTWSAQENFGQGLKKGKLKFTLQGSRMHGGWTLVRMQRKPDDKREN
                     WLLIKEIDDDAGEEPDALTDQFDVSVRTGRPMKRIAAAVGPVASAAADRKRRGKRPAF
                     TTPQLATLVDKPPEGDDWLHETKFDGYRCLAALGGGGTRLYTRSGKDWTDRFGRLATA
                     FDALPCDTALIDGEVMADRIRQSAFSSLQRALKEGGDLVFFAFDLLRVDGTDLTDAPL
                     IERRERLAGLLAGLPAGGALRTSDHVIGHGARIFAAACEAGGEGTVSKRLDAPYRGGR
                     AKTWLKTKCTRRQEFVIVGFSPSDKKGRPFASLLVASHEAGKLRYKGRVGTGFSEASM
                     KDLSAAFTPRKTPPVGDVPAAIARGASWLRPDL"
     gene            complement(1449..>2040)
                     /locus_tag="EYO87_17590"
     CDS             complement(1449..>2040)
                     /locus_tag="EYO87_17590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007120129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Ku protein"
                     /protein_id="HIC67770.1"
                     /translation="DAIKLETKKTFELVQFVDFRDIPPIYFNKPYYIVPSDDLAEDAY
                     RVVRDALRQTNKVGLGQVTMRGKEYLAAVKACGDGLLMESLHYENELREADQIFTGIE
                     DAPADVELVEVATSLIERKSAPFDATAYTDKYAAALRDLLEAKRKDKKAPRVRDDAER
                     EVAGGDKVVDLMSALKQSLKTARAADSKKPKRKKAS"
BASE COUNT          325 a          665 c          647 g          403 t
ORIGIN      
        1 caggtcaggg cgcagccagg atgcgccacg cgcgatggcc gcgggcacat caccgaccgg
       61 cggggtcttg cggggggtga aggcggcaga cagatccttc atcgaggcct cggaaaagcc
      121 tgtgccgacg cgacccttgt agcgcagctt gccggcttcg tgcgaggcta ccagaagcga
      181 tgcgaacggc cgccccttct tgtccgaggg gctgaatccc acgatcacga attcctgtcg
      241 tcgcgtgcac ttggtcttca gccaggtctt ggcgcgtcca ccgcgatagg gtgcgtcgag
      301 acgctttgac accgtgcctt cgcccccggc ctcgcaagcc gcggcgaaga tccgggcgcc
      361 gtggccgatg acgtggtcgc ttgtccgcag cgcgccgccg gccggcagac ccgccagcaa
      421 gccggccaat cgttcgcgcc gctcgatcag gggcgcgtcg gtcaagtcgg tgccgtccac
      481 gcgcagcagg tcaaaggcga aaaagaccag atcgcccccc tccttgagtg cgcgttgcag
      541 cgatgaaaag gccgattgcc gaatccgatc ggccatcacc tcgccgtcga tcagggcggt
      601 gtcgcagggc aaggcgtcga acgccgtggc caggcggccg aaacgatccg tccagtcctt
      661 gcccgagcgg gtatagagcc gcgtccctcc gccacccagc gcggcaaggc atcggtagcc
      721 gtcgaacttc gtctcgtgca gccaatcgtc accctcgggt ggcttgtcga ccagcgtggc
      781 aagctgcggc gtggtgaagg ccggccgttt gccccggcgt tttcgatccg cggccgcgga
      841 tgcgaccgga ccgaccgcgg ccgcgatccg tttcatcggg cggccggtcc tgaccgagac
      901 gtcgaactgg tcggtcaacg cgtccggttc ttcccctgcg tcgtcgtcga tctccttgat
      961 cagcagccag ttttcccgct tgtcatcggg ctttcgctgc atccgcacca aggtccatcc
     1021 gccgtgcatc cggctgccct gaagcgtgaa tttcagcttg cccttcttca ggccctgccc
     1081 gaaattctcc tgcgccgacc aggtgccctc gtcccacagc atcaccgttc cggcaccgta
     1141 ttcgcctttg gggatcgtgc cttcaaagcc ggcatagtcg atcggatgat cctcggtccg
     1201 gaccgcaagg cgtttttcgc gcggatcgga ggaagggccc ttggggacag cccaactgag
     1261 caacacgcca ttccattgca gccggaaatc gtagtgcagg tgggaggcgg catgtttctg
     1321 cacgatgaag cggtgattgt cgtctgcggc agccggaatc cggcctatcg gctcgccggt
     1381 gcgggtgaaa ttgcgcttgt cgttgtattc ggccagaggg tcggccggcc gagcgtcgcg
     1441 gcgggtcatc acgacgcctt cttgcgcttc ggcttcttgc tgtcggccgc ccgcgcggtc
     1501 ttcaggctct gtttcagcgc gctcatcaga tcgacgacct tgtcgccgcc ggcaacttca
     1561 cgttcggcat cgtcgcggac tcgtggggct ttcttgtcct ttcgcttggc ctccagcaga
     1621 tcgcgcagcg ccgcggcata tttgtcggta taggcggtgg cgtcgaaggg cgcggatttg
     1681 cgttcgatca gcgaggtggc aacctcgacc agttcgacat cggcgggtgc atcctcgata
     1741 ccggtgaaaa tctgatcggc ctcgcgcagt tcgttttcgt aatgcagcga ttccatcaac
     1801 aagccgtcgc cacaggcctt gacggcggca agatattcct tgccgcgcat cgtcacctgg
     1861 cccagcccga ccttgttcgt ctgccgcagc gcgtcgcgca cgacgcgata ggcatcctcg
     1921 gccagatcgt cggaagggac gatgtagtag ggcttgttga agtagatcgg cggtatatcg
     1981 cgaaaatcga cgaactgaac cagttcgaag gtctttttcg tctccagctt gatcgcgtcg
//
LOCUS       DTVW01001326            1798 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_860565, whole
            genome shotgun sequence.
ACCESSION   DTVW01001326 DTVW01000000
VERSION     DTVW01001326.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1798)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1798)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1798
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_860565"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..258)
                     /locus_tag="EYO87_17595"
     CDS             complement(<1..258)
                     /locus_tag="EYO87_17595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011569340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c-type biogenesis protein CcmH"
                     /protein_id="HIC67771.1"
                     /translation="MSRLALILMLLLAPFAALAVQPDEVLDNPVLESRARDISQKMRC
                     PVCQGESIDESNAGVSRDLRLYIRERLVAGDSDAEVVDAVVD"
     gene            complement(255..>1798)
                     /locus_tag="EYO87_17600"
     CDS             complement(255..>1798)
                     /locus_tag="EYO87_17600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010399678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="heme lyase CcmF/NrfE family subunit"
                     /protein_id="HIC67772.1"
                     /translation="FTSNPFLRLADPPFNGRDLNPLLQDPGLAFHPPFLYLGYVGLSM
                     AFSFAIAALIEGRVDAAWARWVRPWTLAAWMFLTTGISIGSWWAYYELGWGGFWFWDP
                     VENASFMPWLLAAALMHSAIVVEKRESLKSWTILLAIMAFGFSMIGTFIVRSGVLTSV
                     HSFASDPARGMFILGILTVFVGGGLTLYAVRAPAMMAKGVFQPTSREGALVLNNVLLA
                     VSAFVVFIGTMWPLFAEAMWNRKLSVGPPFFNKAFTPFMIVLALALPLGAIMPWKRAF
                     LGRTMRLLRGPLMFALAVMLLVFAVSTGRSAVAVIGAGLGSWLIAGSVADLIHRTGNA
                     GLSRLARLPRADWGKAIAHAGLGVTFVGVGLLTAWQTEDIRVAQVGETFDLTGYQITL
                     EAVDKVQGPNYLSTMATMAVARDGRSIATTYPEKRVYPVQGMPTTEAAIVNGFFRDIY
                     LVIGDEQAGGGWAVRSYVKPFANWIWLGAIMMALGGLVSLSDRRYRVAAGARSSTPAR
                     AVPAE"
BASE COUNT          396 a          608 c          546 g          248 t
ORIGIN      
        1 gtccacgacg gcatcgacga cctcggcgtc actgtcaccc gccaccagcc gctcgcggat
       61 atagaggcgc agatcgcggc tgaccccagc gttggattcg tcgatagact cgccctgaca
      121 aaccggacaa cgcatctttt gcgaaatatc gcgggcacgg ctttcaagga cgggattgtc
      181 aagaacctca tcgggctgaa ccgccagcgc cgcgaagggc gccagcagaa gcatcaggat
      241 cagcgcaagc cggctcattc cgccggaacc gcgcgggccg gcgtggagga acgcgcgcca
      301 gccgccaccc ggtagcggcg gtccgacagg ctgaccaaac cgccaagcgc catcatgatc
      361 gcgcccagcc agatccagtt ggcgaagggt ttgacatagg accgcacggc ccagcccccg
      421 ccggcctgct cgtcaccgat gaccagatag atgtcacgga agaagccgtt gacgatggcg
      481 gcctcggtcg tgggcatgcc ctgcaccgga tagacccgct tttccggata ggttgtggcg
      541 atactgcggc catcccgcgc caccgccatc gtcgccatgg tcgagaggta attgggcccc
      601 tgaaccttgt ccaccgcttc cagcgtgatc tgatagcccg tcaggtcgaa ggtttcgccg
      661 acttgggcaa cgcggatatc ctcggtctgc caggcggtca gaagtccgac gccgacaaag
      721 gtcacaccca gcccggcatg ggcgatcgcc tttccccagt cggcgcgcgg cagccgcgcc
      781 agccgcgaca gaccggcatt gccggtgcga tggatcaggt cggcgacaga gccggcgatc
      841 agccagcttc ccagacccgc gccgatcacc gcgaccgcgc tgcgcccggt cgagactgcg
      901 aagaccagaa gcatcaccgc cagggcaaac atcaaaggcc cgcgcaacag ccgcatcgtc
      961 cgccccagga acgcccgctt ccacggcatg atcgcaccca agggcagcgc cagcgccagc
     1021 acgatcatga aaggcgtgaa tgccttgttg aagaatggcg ggccgaccga cagcttgcga
     1081 ttccacatcg cctcggcgaa cagcggccac atcgtaccga tgaagaccac gaaggccgag
     1141 accgccagca gcacattgtt caagaccagt gcgccttcgc gcgaagtcgg ctggaacacg
     1201 cccttggcca tcatggccgg cgcccgcacc gcatagagcg tcagtccgcc gccgacgaac
     1261 accgtcagga ttccaaggat gaacatcccg cgcgccggat cgctggcaaa actgtgaaca
     1321 gaggtaagca cgccggaacg cacgatgaac gttccgatca tcgagaaacc gaaggccatg
     1381 atcgccagca gaatcgtcca gcttttcagc gattcacgct tttcgacaac gatggcggaa
     1441 tgcatcaggg cggcggccag aagccagggc atgaagctgg cattctcgac cgggtcccag
     1501 aaccagaagc caccccagcc cagttcgtaa taggcccacc aggatccgat cgaaatgccc
     1561 gtcgtcagaa acatccatgc agccaatgtc cagggccgga cccagcgggc ccaggcggca
     1621 tcgacccgcc cttcgatcag cgcggcgatg gcaaagctga acgccatcga cagcccgaca
     1681 tagcccagat acaggaacgg cggatggaac gcgaggccgg gatcctgcag cagcgggttc
     1741 aggtcgcgtc cgttgaacgg cggatcggcc agccgcagga acgggttgga tgtgaaga
//
LOCUS       DTVW01001327            1310 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_869058, whole
            genome shotgun sequence.
ACCESSION   DTVW01001327 DTVW01000000
VERSION     DTVW01001327.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1310)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1310)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1310
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_869058"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
BASE COUNT          222 a          411 c          469 g          208 t
ORIGIN      
        1 ccgaacgcat cagcctgccg cgcctgccgg gcgcgggcgg ggcggcggcg cccaaggccg
       61 agaccacgga attcgcgctg cccgaactgc cggtcggcgt cgagatcaag gaaatccgcg
      121 ccggccgcgt cgaattgggc cagccggtga tcggcgtcga ggcggcgatc tccatcgacg
      181 gcagcatgag ccttgccggc ggcgagggcg cggccaaact gaccatcgac cgtctggacg
      241 ggccgcgcgg ccagttcgtg ctggatgcgg gctattcgaa cggaaccaag gtcctgcgcg
      301 tcaatctggg cctggacgag gcggccgacg gcctgctggt gaacctcgtc aacctctatg
      361 acaagccctc ggtcacggcg cagatcagcg gcgaaggcga gatcaaggat ttcatggccg
      421 acatccgtct ggcgacggac ggccagcagc gtgtcaccgg atcggtgggg gcgaatgcgg
      481 gggcagggcc cgatggcagc cccggcacga atttccgcgt ccagcttggc ggcgacatcg
      541 ccaccctgct gccgcccgag gatcgtgcat ttttcggaac cggaacgcaa ttgacggccg
      601 aaggctggcg cggcgacgac gggcggctga acctgccggt gctcaaactg gccaccgatg
      661 cgcttgggat cgacggtcgg ctttcgctga atgccaagaa tgcgccggaa accgcgcagc
      721 ttctgatcac gctgggccgt gacgccaatg cgtcgcaggt tcccgtcgcg ctgcctttcg
      781 cgcaggacac gacagtggag tcgggacggc tggaactgca atacgattcg gccgaggggc
      841 agggctggac cctgaccggc cgcgtcggcc agctggatca gggccaggtc acgatcggcg
      901 cgctgacgct ggacggggcg ggcgcggtgg tgctggataa tggcgcgctg tccaacgtgt
      961 cgggcaggat cggctttggc ggacagcgga tggactttgc cgatcgcggt ctggccgagg
     1021 ctatcgggac gcagctggac ggatcggccc agttcgattt cacgcccgga aatgccgtcg
     1081 aattgtccga ggttacggtg aacggcgcgg attacggcct gtcgggatat ttcctggtct
     1141 ccggcctgtc cagcggcttc ctgatctcgg ccgatgccga ggcgcgctat gacgatctcg
     1201 cgcggctgtc ggtcatcgcg aaccggtcga tcaagggcag cgcgaacgca tcggtgaccg
     1261 gctactacaa cgtcctgacc aagggtttcg acatcgacgc cgaagccacc
//
LOCUS       DTVW01001328            2075 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_870111, whole
            genome shotgun sequence.
ACCESSION   DTVW01001328 DTVW01000000
VERSION     DTVW01001328.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2075)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2075)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2075
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_870111"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            87..362
                     /locus_tag="EYO87_17605"
     CDS             87..362
                     /locus_tag="EYO87_17605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67773.1"
                     /translation="MPELKLKAGALTCVPEPRSARVCADDAAVFRFLPGETGFGANAL
                     SAAVVKEAIPIASFAPVFVADRAARTRAERGRRRRLIEVFMGWVPGC"
     gene            complement(447..551)
                     /locus_tag="EYO87_17610"
                     /pseudo
     CDS             complement(447..551)
                     /locus_tag="EYO87_17610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010443830.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS6 family transposase"
     gene            complement(858..1787)
                     /locus_tag="EYO87_17615"
     CDS             complement(858..1787)
                     /locus_tag="EYO87_17615"
                     /inference="COORDINATES: protein motif:HMM:PF03466.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HIC67774.1"
                     /translation="MFTLRQLETFREVVRTRTTVGAAKALNVSQPAVSNMIRQMETRI
                     GFPLFERLGNRLVPTPDADEIYRDSESIFSLYQAFSHRIETRQRSEAGHLRLVGTPPL
                     ANALIPQTLREFLSKRPAVRVHLDTRRITGVMESVETRMADIGLGLNPPDREGLSAEV
                     LAMAHMVCVFPPGHPLEDKRMITVRDLAGLPLILYEPGSSLDRAISSDILTRALRTQA
                     VAEVRYSSLACLMVEAGLGVGFVDSLTATVGDRYRLSARPLCPSQPVPVCAITRKGEP
                     AKRIQATFLSELRKSPALTAIRDYGADVPGSAL"
BASE COUNT          385 a          632 c          689 g          369 t
ORIGIN      
        1 ccagcaatgg cggaggaagg gaagaatccg ccacgctgtc gggtctgaag atcttgtagc
       61 gcagcgttcc ggactcgctg ttatggatgc ccgaactgaa gctgaaggct ggcgccttga
      121 cctgcgtacc ggagccgcgc tccgctcggg tctgcgcgga cgatgctgca gttttccgct
      181 tcttgccagg ggaaacaggc ttcggagcga acgcgctcag cgcagccgtc gtgaaggagg
      241 ctatcccgat cgcaagcttt gcccccgtct tcgtcgcgga tcgtgccgcg cggacccgcg
      301 ccgagcgcgg ccgtcgccgg cgtctgatag aggttttcat gggctgggtt cccggctgtt
      361 gacaggccaa cgtcgcccca tcaacacagc gcggctgtcc gtggttcaat catgacatcg
      421 ctattcgcgg atcaagttca gcaaaccatg atctcttccg gatcacggta tgataccgtg
      481 tagcgggcag agaagaagcc tgcgaacagg atcacgtcct tcgggaactg aacacctttg
      541 aacgaaatca tggcatgccc tccacctacc agccacgcat accagaatgg tttgacgagc
      601 gacgcttagc cgtcaatcga gaaagtttgc gacagagccg gcgaaagccc cggcgcggcg
      661 aagatggatg gcgcagccgc ctgccacggt tgcaaggatc atcccggccc ggcaaggcac
      721 ggcggaccgg cgcgtctgac cgcgtggcga tccggggtcg gtccttcgtc cggcgatagg
      781 gcgtggttgc ggctgcgtgg ggaacgctgc ggatggcgcg gccgggaacc gcccgacgca
      841 cttcagtcag cctctcctca cagggctgaa ccgggaacat ccgcgccgta gtcccggatt
      901 gccgtgaggg cgggggattt tcgcaattcg gacaggaatg tcgcctggat ccgcttggcg
      961 ggttcgcctt tcctggtgat ggcgcagacc ggaaccggct ggctggggca gagcggccgg
     1021 gccgaaagcc tgtagcggtc cccgaccgtc gcggtcaggg aatcgacgaa gccgacgccc
     1081 agcccggcct cgaccatgag gcaggcgagc gaggaatagc gcacctcggc caccgcctgc
     1141 gtccgcaggg cgcgggtcag gatgtcggag gaaatcgcgc gatccagact cgaaccgggc
     1201 tcatacagga tcagcggcag accggccagg tcgcggacgg tgatcatgcg cttgtcctct
     1261 agcggatggc cgggcgggaa gacacagacc atatgggcca tggcgagaac ctcggcggag
     1321 aggccttcgc gatcgggcgg gttcaggcca agcccgatat cggccatgcg ggtttccacg
     1381 gattccatca cgccggtgat ccgtcgcgta tccagatgca cccgcacggc cgggcgtttc
     1441 gacaggaact cgcgcagggt ctgggggatc agcgcattgg ccaggggcgg ggtcccgaca
     1501 agcctgagat ggccggcctc gctccgctgg cgggtttcga tccggtggct gaaggcctgg
     1561 tagagggaaa agatcgattc gctgtcgcga tagatttcat cggcgtccgg cgtcggaacc
     1621 agccggttgc cgagccgttc gaaaagagga aagccgatcc gggtctccat ctgccggatc
     1681 atgttggaca cggccggctg cgagacgttc agcgccttgg ccgcgccgac cgtcgttcgc
     1741 gtgcgcacca cctcgcggaa tgtctccaac tgcctcagcg tgaacatgat ccagcctgac
     1801 tgcacaaatc gggtgcagta taagcagata ttattctgct gcggaagtat ttaataacca
     1861 gctatattgc tttgttgtcc ggccccatgc tgaacttgcc ttgcagggac gctggccttt
     1921 caccgtcttc ggctgcccgc attatcccga cagggccgtg ggcctgcgca aaccaacaga
     1981 ggggatcgag atgaaactca tgatcagcag ccttgcgctg tcgcttgccc tgggcggcgc
     2041 tgcgctggcg caggacaaat acgtcgtcgc actgg
//
LOCUS       DTVW01001329            1278 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_871079, whole
            genome shotgun sequence.
ACCESSION   DTVW01001329 DTVW01000000
VERSION     DTVW01001329.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1278)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1278)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1278
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_871079"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..663
                     /locus_tag="EYO87_17620"
     CDS             <1..663
                     /locus_tag="EYO87_17620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NLP/P60 hydrolase"
                     /protein_id="HIC67775.1"
                     /translation="RQLNFGADLTVIDTQGDWVFAQAAMDGYCGWLRAAALSDDMPPI
                     THRVTAPATHLYPAADMKRHQLHALSIGARLSVVEVEGNFARLAAGGYVPVQHIGDRP
                     ATDPIAVAETLLGTPYLWGGNSDWGIDCSGLAQAALTACGTTCPGDSDLQRAAFPAVD
                     DIRRGDLLFWPGHVALAASAELMIHATAWKMAVIREPIALAIARIDAAGEGPFLGAHR
                     PQ"
     gene            complement(678..>1278)
                     /locus_tag="EYO87_17625"
     CDS             complement(678..>1278)
                     /locus_tag="EYO87_17625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010392040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase TruB"
                     /protein_id="HIC67776.1"
                     /translation="TRPDRAAIEAALPGYVGEIMQVPPAFSAVKVDGARAYDLAREGE
                     DPDLAARPLWVESLSLIEADGDTARLEMVCGKGGYVRSIARDLGRDLGCLGHVASLRR
                     TWSGPFEVEDGMSFDGIDREAQDRIQARLLPLEAALTDLPALRATPEGAIRIRNGNPG
                     EVTGGAEWGELVWVADARGPVCIGRYQGGTVQPERVFNL"
BASE COUNT          194 a          465 c          429 g          190 t
ORIGIN      
        1 aggcagctga atttcggcgc cgacctgacc gtgatcgaca cgcagggcga ctgggtcttc
       61 gcgcaggcgg ctatggacgg ctattgcggc tggctgcgcg ccgccgcgct gagcgacgac
      121 atgccgccga tcacccaccg cgtgaccgcg ccggcgaccc atctctatcc ggccgccgac
      181 atgaagcgtc accagttgca cgcgctgtcc atcggcgcgc gcctgtcggt cgtggaggtc
      241 gaggggaatt tcgcgcgcct cgccgccggc ggatacgtcc ctgtccagca catcggcgac
      301 cggcccgcga ccgatccaat cgccgttgcg gaaaccctgc tgggcacgcc ctatctgtgg
      361 ggcggcaaca gcgattgggg catcgattgt tccggccttg cccaggctgc gctgaccgcc
      421 tgcggtacca cctgtcccgg cgacagcgac ctgcaacggg cggcctttcc ggcggtcgac
      481 gacatccggc gcggcgatct gctgttctgg ccgggccatg tggcgctggc ggcctcggcc
      541 gaactgatga tccacgcgac ggcatggaag atggccgtga tccgggaacc gatcgccctg
      601 gccatcgccc gcatcgacgc cgcgggcgag ggtccgtttc tcggcgcgca ccggccgcaa
      661 tgaccgaccc cggatgatta caggttgaag acccgctcgg gctggaccgt gccgccctga
      721 tagcggccga tgcagaccgg cccgcgagca tccgcgaccc agaccagttc gccccattcc
      781 gcacctccgg tgacctcgcc cggattgccg ttgcggattc ggatcgcgcc ttcgggcgtg
      841 gcgcgcagcg cgggaaggtc ggtcagcgcg gcctccagcg gcagcaatcg cgcctgaatc
      901 cggtcctgcg cctcgcggtc gatcccgtcg aagctcatgc cgtcctcgac ctcgaaggga
      961 ccggaccaag tgcggcgcag gctggcgaca tggcccaggc aacccagatc gcggccaaga
     1021 tcgcgggcga tcgagcggac atagccgccc ttgccgcaga ccatttccag ccgcgccgtg
     1081 tcgccatcag cctcgatcag ggacaggctt tcgacccaca ggggccgcgc ggccagatcc
     1141 ggatcctcgc cctcgcgcgc cagatcatag gctcgcgcgc catcgacctt gacggcggaa
     1201 aaggcgggcg gaacctgcat gatctcgccg acatagccgg gcagggccgc ctcgatcgcg
     1261 gcgcggtcgg gccgcgtc
//
LOCUS       DTVW01001330            1241 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_871677, whole
            genome shotgun sequence.
ACCESSION   DTVW01001330 DTVW01000000
VERSION     DTVW01001330.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1241)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1241)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1241
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_871677"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..79)
                     /locus_tag="EYO87_17630"
     CDS             complement(<1..79)
                     /locus_tag="EYO87_17630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011747121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="HIC67777.1"
                     /translation="MTTNIILLGPPGAGKGTQARRLVEGR"
     gene            complement(120..>1241)
                     /gene="secY"
                     /locus_tag="EYO87_17635"
     CDS             complement(120..>1241)
                     /gene="secY"
                     /locus_tag="EYO87_17635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_351783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HIC67778.1"
                     /translation="LGIMPYISASIIVQLLTAMVPQLEQLKKEGEQGRKKINQYTRYG
                     TVLLALFQAFGLAKSLEAGGLAHEPGIFFQASVVITLVGGTMFLMWLGEQITARGIGN
                     GISLIIFVGIVAEIPAALARFFEQGRTGAISTPVILGVIVMVVAVVAFVVFMERALRK
                     IRIQYPRRQVGMKVYDGQSSHLPIKVNPAGVIPAIFASSLLLLPVTISTFSGNQTGPV
                     MSTILAYFGPGQPLYLIFFAAMIVFFTYFYTQNVSFKSDDVADNLKNQGGFIPGIRPG
                     KRTEEYLDYVVNRVLVLGSAYLAGVGLLPEIIRAQWSVPFYFGGTSVLIVVSVTMDTI
                     NQIQSHLLAHQYEGLIEKSQLRGKRKPGTAKPRRTPSRR"
BASE COUNT          261 a          376 c          385 g          219 t
ORIGIN      
        1 cccgcccctc gaccagccgc cgcgcctgcg tgcccttgcc ggcgccgggc ggccccagaa
       61 gaatgatgtt cgtcgtcatg aaagcccgtc cccctcggct ggctgtttgt cagtcagtct
      121 cagcgacgcg acggcgtgcg ccgcggcttc gccgtccccg gcttgcgttt accacgcagt
      181 tgggatttct caatcaggcc ttcatattgg tgggccagca gatggctctg gatctggttg
      241 atcgtgtcca tcgtgacaga aaccacgatc agcaccgagg tgccgccgaa atagaacggc
      301 acggaccatt gcgcacggat gatctcgggc agcaggccca cgccagccag ataggccgag
      361 ccgagcacca gcacgcgatt gaccacgtaa tccagatatt cctcggtccg cttgccgggg
      421 cggatgccgg gaatgaagcc gccctgattt ttaaggttgt ccgccacgtc gtcggatttg
      481 aagctgacgt tctgggtata gaagtaggta aagaagacga tcatcgccgc gaagaagatc
      541 aggtaaagcg gctgacccgg tccgaaatag gccaggatcg tggacatgac cggcccggtc
      601 tggttgcccg agaaggtcga gatcgtgacc ggcagcagca gcagcgaact ggcgaagatg
      661 gccgggatga cgccggcggg gttgaccttg atcggcaggt gcgaggattg cccgtcatag
      721 accttcatcc ccacctgacg gcgcggatac tggatgcgga tcttgcgcaa ggcgcgttcc
      781 atgaagacga cgaacgcaac cacggcgacg accatcacga tgacgcccag gatgaccggg
      841 gtcgagatcg ccccggtacg gccctgttcg aagaaacgtg ccaaggcggc gggaatctcg
      901 gcgacgatgc ccacgaagat gatcagcgaa attccgttgc cgataccgcg tgcggtgatc
      961 tgttcgccca gccacatcag gaacatcgtg ccgccgacca gcgtgatcac gaccgaagcc
     1021 tgaaagaaga ttcccggctc gtgcgccaga ccgccggcct caaggctttt cgcaagtccg
     1081 aaggcctgga acagcgccag aagcacggtg ccatagcggg tatactgatt gatcttcttg
     1141 cgcccctgct cgccctcttt cttgagctgc tcgagctggg gaaccatcgc ggtcaacagc
     1201 tgaacgatga tcgaggccga gatatagggc atgataccaa g
//
LOCUS       DTVW01001331            1017 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_871811, whole
            genome shotgun sequence.
ACCESSION   DTVW01001331 DTVW01000000
VERSION     DTVW01001331.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1017)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1017)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1017
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_871811"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>1017
                     /locus_tag="EYO87_17640"
     CDS             <1..>1017
                     /locus_tag="EYO87_17640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011766714.1"
                     /note="has catalase and peroxidase activities; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="catalase-peroxidase"
                     /protein_id="HIC67779.1"
                     /translation="LENPLAAIQMGLIYVNPEGPDGKPDPVASGRDIRETFARMGMND
                     EETVALTAGGHTFGKCHGAGDAALVGAEPEGEDIAAQGLGWISRHESGRGGHTITSGI
                     EGAWTPNPTQWDNGYFDMLFGYEWELTKSPAGAHQWAPVGVDQDHMAPAADDSGRKVK
                     TMMTTADMAMRMDPIYEPISRRFHENPDQLREAFARAWFKLTHRDMGPKARYLGKDVP
                     AEDLLWQDPIPACDHPVVDAADIAALKDQILGSGLSVPELVQTAWASAATFRGSDKRG
                     GANGARIRLAPMKDWEVNQPERLSRVLSVLEGIRADFNGKATGGKRISLADLIVLGGS
                     AAIE"
BASE COUNT          185 a          330 c          353 g          149 t
ORIGIN      
        1 cgctcgaaaa cccgctcgcc gcgatccaga tggggctgat ctacgtcaat cccgaagggc
       61 cggacggcaa acccgatccg gttgcctctg gccgcgacat ccgcgagaca ttcgcgcgca
      121 tgggcatgaa tgacgaggaa accgtggccc tgaccgcggg cggccacacc tttggcaaat
      181 gccacggcgc gggcgacgcg gcgctggtcg gcgccgaacc cgagggcgag gatatcgccg
      241 cccagggcct gggctggatc agccgccacg aaagcggccg gggcggccat accatcacct
      301 cggggatcga gggggcgtgg acgccgaacc cgacgcaatg ggacaacggc tatttcgaca
      361 tgctgttcgg ctatgaatgg gaactgacca aaagccccgc cggcgcgcat caatgggccc
      421 ccgtgggcgt ggaccaggat cacatggccc cggcggccga cgattccggc cgcaaggtca
      481 agacgatgat gaccactgcc gacatggcga tgcggatgga cccgatctat gaaccgatct
      541 cgcgccggtt ccatgaaaat cccgatcagc tgcgcgaggc tttcgcgcgg gcctggttca
      601 agttgacgca tcgcgacatg ggccccaagg cgcgctatct gggcaaggat gtcccggccg
      661 aggatctgct gtggcaggat ccgatcccgg cctgcgatca tcctgtggtc gatgcggccg
      721 acatcgccgc gctgaaggat cagatcctcg gctcgggcct gtcggtgccg gaactggtgc
      781 agaccgcctg ggcctcggcc gcgaccttcc gcggttcgga caagcgcggc ggggccaatg
      841 gcgcgcggat ccggctggcg ccgatgaagg actgggaggt gaaccagccc gaacggctgt
      901 cccgcgtcct gtcggtgctg gaaggcatcc gggccgattt caatggcaag gccaccggcg
      961 gcaagcgaat ctcgctggcc gacctgatcg tgctgggcgg atccgccgcg atcgaga
//
LOCUS       DTVW01001332            1145 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_873856, whole
            genome shotgun sequence.
ACCESSION   DTVW01001332 DTVW01000000
VERSION     DTVW01001332.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1145)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1145)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1145
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_873856"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>1145
                     /locus_tag="EYO87_17645"
     CDS             <1..>1145
                     /locus_tag="EYO87_17645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009803514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="methylcrotonoyl-CoA carboxylase"
                     /protein_id="HIC67780.1"
                     /translation="PPGAGIITGIGVIEGRQCMIIANDATVKGGTYFGMTSRKHVRAQ
                     KIAWKNRLPVITLVDSGGAFLPDQENIFPDEGQFGSIFHQQIGMSGDGVPQIAVVMGP
                     CTAGGAYIPALCDEVVIVRGQGFMYLGGPELTFAATGEKVEAEELGGGKMHSSVSGVT
                     DHLAEDDAHALAITREIVSHLGEKPRPRKTPAAPRPPAYPVEEIYGIVSRDPRVPTDN
                     REIVARLVDGSDFHEFKPLYGDTIMTGWGRIHGHEVGIIANTGVLFVEAALKATHFIN
                     LCVQRDIPLLFLADVNGFMVGREVEQMGIAKAGAKMITAMSSARVPKFTIITGGSYGA
                     GYLAMLGRPFQPDAMFAWPTGRSAIMGPEQAASVLAQVRAQINEREG"
BASE COUNT          217 a          355 c          367 g          206 t
ORIGIN      
        1 gccaccgggc gcgggcatca tcacgggcat cggtgtgatc gaaggccgtc agtgcatgat
       61 catcgccaat gatgccaccg taaagggcgg cacctatttc ggcatgactt cccgcaagca
      121 tgtgcgcgcc cagaagatcg catggaagaa ccgtctgccc gtcatcaccc tcgtggattc
      181 cggcggtgcc ttcctgccgg atcaggaaaa catctttcct gacgaaggcc agttcgggtc
      241 catctttcac caacagatcg gcatgtcggg cgatggtgtg ccgcaaatcg ccgtggtcat
      301 ggggccctgc accgcgggtg gtgcctatat ccccgcgctc tgtgacgaag tggtgatcgt
      361 gcgcggtcag ggctttatgt atctgggcgg accggaattg acctttgccg caaccggcga
      421 aaaggtcgaa gccgaagaac tgggtggcgg caagatgcat tcgtcggtgt cgggcgtgac
      481 cgaccatctg gccgaggatg acgcccacgc cctggccatc acccgcgaga tcgtcagcca
      541 tctgggcgaa aagccccggc cccgcaagac gcccgccgcg ccgcgcccgc cggcctatcc
      601 ggtcgaggaa atctacggca ttgtcagccg cgatcccagg gtgccgacag acaaccgcga
      661 gatcgtcgcg cggctggtgg acggcagcga ttttcacgaa ttcaagccgc tttatggcga
      721 cacgatcatg accggctggg ggcgcatcca cggccacgag gtcgggatca tcgccaatac
      781 aggcgtgctt ttcgtcgaag ccgcgctgaa ggcgacgcat ttcatcaatc tctgcgtcca
      841 gcgtgatatt ccgctgctgt tcctggccga tgtgaacggc ttcatggtgg gccgcgaggt
      901 cgagcagatg ggcattgcca aggccggtgc taaaatgatc acggccatgt cttcggcccg
      961 ggtgccgaaa ttcacaatca tcaccggtgg ctcttacggc gcgggatacc tggcgatgct
     1021 gggccgcccg ttccagccgg acgcaatgtt cgcctggccg acgggacggt cggcaatcat
     1081 ggggccggaa caggccgcca gcgtgctggc tcaggtccgc gcgcagatca acgaacgcga
     1141 aggca
//
LOCUS       DTVW01001333            2234 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_875771, whole
            genome shotgun sequence.
ACCESSION   DTVW01001333 DTVW01000000
VERSION     DTVW01001333.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2234)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2234)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2234
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_875771"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            63..662
                     /locus_tag="EYO87_17650"
     CDS             63..662
                     /locus_tag="EYO87_17650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008385843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HIC67781.1"
                     /translation="MFDWIASFLEGGGPWGIAALMFLENVFPPIPSELIMPLAGYNAA
                     RGVASFWVSVAAGAAGSLAGAYLWYMIGVAYGPVRLRRLIARHGRWLTMTEAQLDRAQ
                     GWFDRHGRSVVFFGRFVPTVRTLISVPAGLARMFLPRFLLFSGLGSLIWTMALAAAGY
                     WLQDRYDRVDAWLNPVSTAVVVLLAAAYLWRVMRWRPDS"
     gene            complement(663..1310)
                     /locus_tag="EYO87_17655"
     CDS             complement(663..1310)
                     /locus_tag="EYO87_17655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009806411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbonic anhydrase"
                     /protein_id="HIC67782.1"
                     /translation="MHHVRPLPQYLVGRYHGWKATSYAENSAWFRRLADDGQRPRAMV
                     ISCCDSRVHVTGIFGAESGEFFIHRNIANLVPPYAPDGMQHGTSAAVEYAVMALKVAH
                     LIVVGHTNCGGVAGCHAMCSGQAPELEEKSSFVGRWMDILRPGYERIKDLPEDQQIRA
                     LEREAVMVSIGNLMTFPFVEAAVQADELSLHGLVHDIREGTLWQAENAGRRWTEI"
     gene            1456..1833
                     /locus_tag="EYO87_17660"
     CDS             1456..1833
                     /locus_tag="EYO87_17660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67783.1"
                     /translation="MAQIRTLPVTEPVRVDVRRVGDIVNELGESAAQNVIELALEQLA
                     GALTATDEALARGDLAGATGHADQLSRLAWQIGLLSLAGVAMDLCACAERHDPGALAA
                     VRARLMRVGNRSLTAIWDRAGIG"
     gene            1896..>2234
                     /locus_tag="EYO87_17665"
     CDS             1896..>2234
                     /locus_tag="EYO87_17665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl aminopeptidase family protein"
                     /protein_id="HIC67784.1"
                     /translation="MQPDFAHPTEDSLPFWPLWQDSDLPADADAGHWPSAGGFSGKAG
                     QICLLPDANGGLRGALLGLGPRSKAGRERFALARATGLPKAVWRLAALPEGLDPDEAA
                     LALLLGQYRFA"
BASE COUNT          326 a          721 c          772 g          415 t
ORIGIN      
        1 gcgctgaacg cggtgcagat cgcggaactg ctgggcaacc gggtgctgaa gaagggctga
       61 tcgtgttcga ctggatcgcc agctttctgg aaggcggcgg gccctggggc atcgccgccc
      121 tcatgtttct ggaaaacgtc tttccgccga tcccgtcgga actgatcatg ccgctggcgg
      181 gatataacgc cgcgcgtggg gtggcctcgt tctgggtcag cgtcgccgcc ggcgcggccg
      241 gttcgctggc gggtgcctat ctgtggtata tgattggcgt cgcctacggg ccggtgcggc
      301 tgcgccggct gatcgcgcgc cacggccgct ggctgacgat gaccgaggcg cagcttgacc
      361 gcgcgcaggg ctggttcgac cggcatggcc gctcggtcgt ctttttcggc cgcttcgtcc
      421 ccaccgtgcg gacgctgatc tcggtccccg ccgggctggc gcggatgttc ctgccgcgct
      481 ttcttctgtt ctcgggcctg ggcagcctga tctggaccat ggcgctggcg gcggcgggct
      541 actggttgca ggaccgctat gaccgggttg acgcctggct gaacccggtc tcgaccgcgg
      601 tggtcgtgct gttggccgcc gcctatctgt ggcgcgtcat gcgctggcgt cccgacagct
      661 gatcagattt cggtccagcg tcggcccgcg ttctcggcct gccacagggt gccttcgcgg
      721 atgtcgtgga ccaatccgtg cagcgacagt tcgtccgcct gcaccgccgc ttcgacgaag
      781 gggaatgtca tcaggttgcc gatcgagacc atcaccgcct cgcgttccag agcccggatc
      841 tgctggtctt cgggcaggtc cttgatccgt tcgtagccgg ggcgcaggat atccatccag
      901 cgaccgacga agctggactt ttcctccagc tccggggcct gcccggaaca catggcatgg
      961 cagcccgcga ccccgccgca gttggtatgc ccgaccacga tcagatgcgc caccttcagc
     1021 gccatgaccg cgtattccac cgccgccgag gtgccgtgct gcatcccatc gggcgcatat
     1081 ggcggcacca ggttggcgat gttgcgatgg atgaagaatt cgcccgattc cgcgccgaag
     1141 atgccggtca cgtggacccg cgaatcgcag cacgagatca ccatcgcccg cggtcgctgc
     1201 ccgtcatcgg ccagccgccg gaaccaggcg ctgttttccg cataggaggt cgccttccag
     1261 ccatgatagc ggccgaccag gtattgcggc aggggacgga catgatgcat ttcgaacctc
     1321 gcgcgtttgc cgcttgatag gcggggattg aacaaaattc gagcggtttc ttccaccgcg
     1381 atcaagtctt tcttcatggc tggacgtcat ggtgccccga catgtgggaa cacgggcaat
     1441 gtgttggaga agacgatggc acagatcagg acgttgccgg tgacagagcc ggttcgcgtc
     1501 gatgtcaggc gcgtgggcga tatcgtgaac gaactgggcg aaagcgcggc gcagaatgtg
     1561 atcgaactgg cgctggaaca gcttgccggc gcactgaccg ccaccgacga ggctctggcc
     1621 cggggcgatc tggcgggcgc aaccggacat gccgaccaat tgtcacggct ggcctggcag
     1681 atcgggctac tgtcgctggc cggcgtggct atggatctgt gcgcctgcgc cgaaaggcac
     1741 gatcccggcg cgctggcggc ggttcgggcg cggctgatgc gggtcggcaa ccgctcgctg
     1801 acggcgatct gggaccgcgc cgggatcggc tgaccggttc ttgcgggcag cggatcacgc
     1861 tgtaatctgg cccgcgatca aggaagggat ccaccatgca gcccgatttc gcccacccga
     1921 ccgaggattc cctgccattc tggccgctct ggcaggattc cgacctgccc gctgacgccg
     1981 atgccggcca ttggccatcg gccggcggct tttctggaaa ggcgggccag atctgcctgc
     2041 tgcccgacgc gaatggcggg ttgcgcggcg ccctgctggg gctggggccg cgatccaaag
     2101 ccggccgcga acgctttgcc ctggcccgcg cgaccgggct gccgaaagcc gtctggcggc
     2161 tggcggcgtt gcccgaggga ctggacccgg acgaggccgc gctggcgctg ctgctgggcc
     2221 agtatcgctt tgcc
//
LOCUS       DTVW01001334            1731 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_876843, whole
            genome shotgun sequence.
ACCESSION   DTVW01001334 DTVW01000000
VERSION     DTVW01001334.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1731)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1731)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1731
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_876843"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..212)
                     /locus_tag="EYO87_17670"
     CDS             complement(<1..212)
                     /locus_tag="EYO87_17670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_353984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(966)-N(2))-methyltransferase
                     RsmD"
                     /protein_id="HIC67785.1"
                     /translation="MRIVGGTLRGLKLAELGAGDAAAHLRPTTDRVREAIFNLLINGS
                     HGNPLPGARVLDLFAGTGALGLEALSR"
     gene            complement(298..1500)
                     /locus_tag="EYO87_17675"
     CDS             complement(298..1500)
                     /locus_tag="EYO87_17675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011748608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridine nucleotide-disulfide oxidoreductase"
                     /protein_id="HIC67786.1"
                     /translation="MRIVIVGAGQAAASMAARLRAQGHDGPLTVLGAEPVAPYQRPPL
                     SKAYLLGQMGLDRLVLRGPEWWQDQGIDLRLGETVTAIDRTAREVVSDRGRLAYDALA
                     LTLGAVPRRLPASMGGHLPGVHVIRTLVDVDALAPAMQPDRRLIVIGGGYIGLEAAAV
                     ARKLGLQVTLIEAAPRILGRVAAPETAKLIRELHHAHDVKILEDIAIERILGEPRATG
                     VSLADGRELPADIVVTGIGVAPETALAEAAGLRIDNGIAADEQGRTSDPAIWAAGDCA
                     SFPWQGGRARLESVGGAIDMAEAVADNMRGADRPYQPKPWFWSDQFDAKLQIAGLGTG
                     YDRIVTRQGDGAHGGSVWYFRAGRLIAVDALNDARAYMIGKRLIEAGRSPDPDAIADA
                     ADLKALLS"
     gene            1585..>1731
                     /locus_tag="EYO87_17680"
     CDS             1585..>1731
                     /locus_tag="EYO87_17680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HIC67787.1"
                     /translation="MSIQTGQTFPQGSLLRVGEKGPESVSTAELAEGRVALFGLPGAF
                     TGTCT"
BASE COUNT          266 a          658 c          560 g          247 t
ORIGIN      
        1 cgcgacagcg cctccagccc cagggcgccg gtgcccgcga acagatccag cacccgcgcg
       61 ccgggcagcg gattgccatg gctgccgttg atcagcaggt tgaagatcgc ctcgcgcacc
      121 cggtcggtgg tcggtctcag atgcgccgcc gcatcgcccg cgcccagttc ggccagtttc
      181 aggccgcgca gcgtgccgcc gacgatcctc acccgacggg ccgccctgcg gtggcgtcaa
      241 gcccgggcca gaggcaccgc ccccccgccc ctgcgggcgc aacggcgttg cgggggctca
      301 tgacagaagc gccttcaggt cggcggcatc ggcaatggcg tccggatcgg gcgatctgcc
      361 cgcctcgatc aggcgcttgc cgatcatgta ggcgcgggcg tcgttcagcg catccaccgc
      421 gatcaggcgg cccgcgcgaa aataccagac cgagccgcca tgcgcgccat cgccctgacg
      481 ggtcacgatc cggtcgtagc cggtgcccaa acccgcaatc tgcagcttgg cgtcgaactg
      541 gtcggaccag aaccacggct tgggctgata gggccggtcc gcgccccgca tgttgtcggc
      601 gacggcctcg gccatgtcga tggcgccgcc gacactttcc agccgcgcgc gcccgccctg
      661 ccacggaaag ctggcgcaat cgcccgccgc ccagatcgcc ggatccgatg tgcggccctg
      721 ttcgtcggcc gcgatgccat tgtcgatcct cagccccgcc gcctcggcca gggccgtttc
      781 aggggccacg ccgattcccg tcaccacgat atcggccggc agttcgcgcc cgtcggcaag
      841 actgaccccg gtggcgcgcg gctcgcccag gatgcgttct atcgcgatgt cttccaggat
      901 cttcacgtca tgggcatggt gcagctcgcg gatcaacttt gccgtctcgg gggccgcgac
      961 gcggcccagg atgcgcggcg cggcctcgat cagcgtgacc tgcaatccca gctttcgggc
     1021 gaccgcggcg gcctccagcc cgatatagcc gccgccgatc acgatcagcc ggcggtccgg
     1081 ctgcatggca ggggccagcg catcgacatc gaccaatgtg cgaatgacgt gaacccccgg
     1141 aagatgaccg cccatcgagg ccggcagccg gcgcgggacc gcgcccagcg tcagcgccag
     1201 cgcgtcatag gcaagacggc cgcgatccga cacgacctcg cgcgcggtgc ggtcgatggc
     1261 ggtgaccgtc tcgcccaggc gcaggtcgat cccctgatcc tgccaccatt cggggccgcg
     1321 cagcaccagc cgatccaatc ccatctgacc cagcagatag gccttggaca gaggcgggcg
     1381 ctgatagggc gccacgggtt cggcacccag caccgtcagc ggcccgtcat ggccctgcgc
     1441 gcgcagccgc gccgccatcg aggcagccgc ctgccccgcg ccgacaatca cgatccgcat
     1501 cccctgccct tccggctgct ggccagtcat cggggcacag cctatagtca cgccgaatcc
     1561 gttgcaattc atggagtagg cgcgatgagc atccagaccg gtcagacatt cccccaaggc
     1621 agcctgctgc gcgtgggcga gaaaggcccc gaatcggttt ccaccgccga actggccgag
     1681 ggccgcgtcg ccctgttcgg cctgcccggc gcctttaccg gcacctgcac c
//
LOCUS       DTVW01001335            1041 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_879286, whole
            genome shotgun sequence.
ACCESSION   DTVW01001335 DTVW01000000
VERSION     DTVW01001335.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1041)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1041)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1041
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_879286"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
BASE COUNT          207 a          336 c          338 g          160 t
ORIGIN      
        1 ccggcgcaac agcgcaggca gcccggtcgt gtcgcggaca ggcggcagat cgcccgccgg
       61 aagaccccgg tgctgcggat cgacctggcg cagcgcatcg tccaggattg cccgcggacg
      121 ggccagaaag tcggtcaggt catgaacctg cacccgtgcc ttcacccaga ccgaattcag
      181 cacgttcaac tgcgccagct cgaccttttg caaatgggcg ctgatccggc gaacatcgtc
      241 gaacggcatg gcgcaatcga tcagcggcat catccaggcc ccggtcacca cgaacagaca
      301 agcgttggga tcggtggcca tgaaccagtt cagcgcctga ttgtcgcgcg ggccgaattg
      361 gaaaatctgc atccgcggcg cgatccggat cagcgctgtc aggaagccct gcggatcgcg
      421 gtctcgcacc gcgacatgcg acgatatggc gcctggcccg atgccgggac gaccgcggaa
      481 ttcgaccgtt tctggtccca gcagatggcc gtggacatcg gccgccacct gatcctgaag
      541 ccaggattcg aaattcggga aaatgtcgct gaaaccctga aatacggcat aaggagccga
      601 ggtcttgccg ttctcggcat ccttgcgcgg aaagcggctc tgcatgtaga ggccgggccg
      661 gcccaggacc cggcgctgga cggtgcgggt gatcatccgc tcgaaccggg cgggccgggg
      721 cgggctgaca tcgggcgcgc cctcgccccg gcgcggaaag cgcgccagaa gccccgccga
      781 gccagaccag agcttgcgcg ccacgaaaca gttcgattcc tcgagcatct ggacatgatc
      841 atcataaagc tggaacgggc gaccctcatg atcgaacttg gccagcgtca gcgaccggct
      901 ttcgatctgg accgaatggc ggcgggccag cgtctggaaa tagctttcat ccgggatcca
      961 gctatagcgg aaaaagcggt cgtgccgggg ccggtcggga tcatccagga tcgcccgcag
     1021 cgtcgtcgcc gtcaggcacc a
//
LOCUS       DTVW01001336            1268 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_885093, whole
            genome shotgun sequence.
ACCESSION   DTVW01001336 DTVW01000000
VERSION     DTVW01001336.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1268)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1268)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1268
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_885093"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..408)
                     /gene="petA"
                     /locus_tag="EYO87_17685"
     CDS             complement(<1..408)
                     /gene="petA"
                     /locus_tag="EYO87_17685"
                     /EC_number="7.1.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009817460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinol-cytochrome c reductase iron-sulfur
                     subunit"
                     /protein_id="HIC67788.1"
                     /translation="MSHADDHVGTRRDFLYYATAGAGTVAAGAATWTLVNQMNPSADV
                     QALSSIQVDVSGVETGTQLTVKFRGKPIFIRRRTEKEIQEGRAVALSELIDQTAQNPN
                     LGGVEPATDQNRTMDEAGEWLVMIGVCTHLGCVP"
     gene            complement(652..>1268)
                     /locus_tag="EYO87_17690"
     CDS             complement(652..>1268)
                     /locus_tag="EYO87_17690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_354256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="JAB domain-containing protein"
                     /protein_id="HIC67789.1"
                     /translation="AAAMPDYELLELVLFRAIPRQDVKPLARRLIEVFKDFNGVLTAE
                     PARLHQVEGVGPAVVTELKIVEAAAQRMARARIMHRPVLSGWDALLDYCHTAMAHRPT
                     EQFRVLYLDRRNVLIADEEQARGTVDHVPVYPREIIRRALELNASALILVHNHPSGDP
                     TPSDSDITMTARVVQAADSMGITVHDHLIIGRSREISFRAQGLL"
BASE COUNT          221 a          407 c          412 g          228 t
ORIGIN      
        1 cggcacgcag cccagatggg tgcagacgcc gatcatgacc agccattcgc cggcttcgtc
       61 cattgtgcgg ttctggtcgg tcgcgggttc gacgccgcca agattggggt tctgcgcggt
      121 ctgatcgatc agttcgctca acgcgaccgc gcggccttcc tggatttcct tttcggtccg
      181 gcggcggatg aagatgggct tgccgcgaaa cttgaccgtc aactgggtgc cggtctcgac
      241 gccgctgaca tcgacctgga tcgaggacag ggcctggaca tcggccgagg ggttcatctg
      301 gttcacaagc gtccaggtgg cggcaccggc ggccaccgtg cctgcgccgg ccgtggcgta
      361 atagaggaaa tccctccggg tgccgacgtg gtcatctgcg tgggacacgg gtcattctcc
      421 aattcaggcc ggaaccccgg ccgatacgac attccgggcc gcgtctgatc gcagcctctg
      481 cggggcggtt ctagccttca attccgcgtc agtccagccg tcaagcccgc gcaaaagcgc
      541 gcatatcgcc gcatctgttg gaattttgcc gcgcgcgacc gaaggcttgg cgccccgcgg
      601 cgacaggcag ccgcgcctcc ggccggggtc tcagccggtc ggggcagtcg atcacagcag
      661 cccctgcgcc cgaaagctga tctcgcgcga gcgtccgatg atcaggtgat cgtggaccgt
      721 gatgcccatg gaatcggcgg cctgaaccac gcgggccgtc atcgtgatat ccgaatccga
      781 gggcgtcgga tcgccagagg gatgattgtg gacgaggatc agcgccgaag cgttcagttc
      841 cagcgcgcgg cggatgatct ctcgcggata gaccggaaca tgatcgaccg tgccgcgcgc
      901 ctgttcctcg tcggcaatca ggacgttcct gcggtccaga tagaggactc gaaattgctc
      961 ggtcggacga tgggccattg cggtgtggca ataatccagc agcgcgtccc agccagacag
     1021 gacaggccgg tgcatgatcc tggcacgggc catgcgctgc gccgccgcct cgacgatctt
     1081 cagttcggtg accacggccg gtccgacacc ctcgacctgg tgcaaacgcg ccggttcggc
     1141 ggtcagtacc ccattgaaat ccttgaaaac ctcgatcagt cgacgagcaa gaggtttcac
     1201 atcctgccgc gggatggcgc ggaacagcac cagttccagc aattcgtaat ccggcatcgc
     1261 ggccgcgc
//
LOCUS       DTVW01001337            3069 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_888838, whole
            genome shotgun sequence.
ACCESSION   DTVW01001337 DTVW01000000
VERSION     DTVW01001337.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3069)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3069)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3069
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_888838"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1204
                     /locus_tag="EYO87_17695"
     CDS             <1..1204
                     /locus_tag="EYO87_17695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010442695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HIC67790.1"
                     /translation="AEQFENDGSPIATIVKGVKRAMAGEYSRELSTKVFAGQCRLIEL
                     GYRQGGPAGYGLRRVLVDERGDIKAELKRGEQKSLQTERVILVPGPDEEVQTVRWIYS
                     RFLKKDRSESEIAAELNERGILTDLGRLWTRATVQQILTNEKYIGNNVYNRRSFKLKR
                     KRVANGPEMWIRSEGAFEAVVQPREFQKVQAVIAARNRRFSDDEMLDRLTRLFQRHGY
                     ISGLVIDEAGGMPSSGAYAHRFGSLLRAYSLVGFTPDRDYRYVEINRMLRLFHGDAVE
                     RVVGEITRLGGAVDRNPVTDLLTINNEFTASVVVSRCRETRGCSLRWKIRFDTGLAPD
                     ITIAIRMDRANEKALDYYLLPQFEMRSKPLGLAEENGLMLDAFRFETLDFLFEMVRRV
                     PVSEVVPW"
     gene            1198..2082
                     /locus_tag="EYO87_17700"
     CDS             1198..2082
                     /locus_tag="EYO87_17700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003265060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome partitioning protein ParB"
                     /protein_id="HIC67791.1"
                     /translation="MVSGIETQGEVQDIPIAEIVVENPRERSEKTFRALVDSIAKVGL
                     KKPITVARDDHEGYRLVCGQGRMEAYLALGETRIPAIIVDANEIERLLRSIIENIARR
                     QQRPLELLQDISTLRDRGYSDHEIADKTGLSFAYVHEIGELIANGEERLLIAVETGKM
                     PLSVALYITRAEEKDVQKALEAAYSSGELRGKKLLEARRLVELRKRHGKHKGVTRTAR
                     SRTRMTSAALVNAYRAEAERQKDMISRAQVTRSSLLFLDAAFKSLLKDENFLTLLRAE
                     GLDSLPRIVVDGLGEAAT"
     gene            2079..3002
                     /locus_tag="EYO87_17705"
     CDS             2079..3002
                     /locus_tag="EYO87_17705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_354500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome partitioning protein ParB"
                     /protein_id="HIC67792.1"
                     /translation="MTRPDKSPNAISPGFETDLLSVPIASILPVKQLPVTVPKSQKYA
                     QITASIREVGLIEPPVISRTKGQSDTFILLDGHVRLLVLKELGEETVTCLVATDDEAF
                     TYNKRISRLATIQEHKMILRAVERGVPEARIAAALNVDVALIRRKRNLLNGICAEVAE
                     MLKARHCPINSFRALRKMKPLRQIQAAELMIAANNYTVAYAEAILAATDAADLVDPAA
                     RKSPVGVTREQAERMKAEMASLQKNIKLIEGTLGPDHLRLVVAGRYVERLLQNDRLVR
                     FLERNHQEILGEFRQIVAGLAQPAVPEVADG"
BASE COUNT          645 a          883 c          970 g          571 t
ORIGIN      
        1 cgccgagcag ttcgagaacg acggcagccc catcgcgacc atcgtcaagg gcgtcaagcg
       61 cgccatggcg ggtgaataca gccgcgagtt atcgaccaag gtctttgccg ggcaatgccg
      121 tctgatcgag cttggctatc gccagggcgg gcccgccggg tacggattgc ggcgcgtcct
      181 tgtcgacgag cgcggcgaca tcaaggccga gttgaagcgc ggcgagcaga aaagcctgca
      241 gacggaaagg gtcatccttg tacccggccc cgacgaggaa gtgcaaacgg tgcgctggat
      301 ctatagccgg tttctgaaga aagacaggtc cgagagcgag atcgcagcgg aactgaacga
      361 gcgcggcatc ctgactgatc tcggccggct ctggacccgc gccaccgtcc agcagatcct
      421 gaccaacgag aaatatatcg ggaacaatgt ctataaccgg cgttcgttca agctgaagcg
      481 caaacgggtc gcgaacggcc cggaaatgtg gatcagatcg gaaggtgcct tcgaggccgt
      541 cgttcagccc cgggaattcc aaaaggtgca ggcggtcatc gccgcgcgca accgacgctt
      601 ttcggatgac gaaatgctgg acaggctgac acggctgttt cagcgccatg gctatatttc
      661 cgggctggtg atcgacgaag ctggcggcat gccgtcaagc ggcgcctatg cgcatcgttt
      721 cggcagcctg cttcgcgcct attccctcgt cgggttcacg ccggatcgcg attatcgcta
      781 tgtcgagatc aaccgcatgc tgcgtctgtt tcacggtgat gcggtcgagc gcgtggtggg
      841 cgagatcacc aggctgggcg gtgcggtcga ccggaatccc gtcaccgatc tgctgacgat
      901 caacaatgag tttacggcct ctgtcgtcgt ttcccggtgt cgcgaaacac gcgggtgcag
      961 cctgcgctgg aagatccgat tcgacaccgg cctcgccccg gacatcacga ttgcgatccg
     1021 catggaccgc gcgaacgaga aggcgctcga ttattacctg ctgccgcagt ttgaaatgcg
     1081 cagcaagccg cttggactgg ctgaggagaa tgggttgatg ctggacgcct tccggttcga
     1141 gacgcttgat ttcctgttcg agatggtccg gcgtgttcct gtctcggagg ttgtgccatg
     1201 gtgagcggga tcgaaacgca gggcgaggtc caggacatcc caatcgcgga gattgtcgta
     1261 gaaaacccac gcgaacggtc ggaaaagacc tttcgtgctc tggtggacag catcgccaag
     1321 gtcgggctga aaaagccaat caccgtcgcg cgcgacgatc acgagggtta tcggctggtc
     1381 tgcggccaag gccggatgga ggcctatctg gccttgggcg aaacccggat cccggcgatc
     1441 attgtggatg ccaatgagat cgaacgactc ctgcgcagca tcatcgagaa tatcgcccgg
     1501 cgccagcagc gccctctgga attgctgcag gatatttcca ccctgcgtga taggggatat
     1561 tctgatcacg agattgccga caagaccggg ctgtccttcg cctatgtcca tgaaatcggc
     1621 gagttgatcg ccaatggcga ggagcggctg ctgatcgcgg tcgagaccgg caagatgccc
     1681 ctcagcgtcg cgctttacat cacgcgggca gaagaaaagg atgtgcagaa agcgctggaa
     1741 gcggcttatt cctccggtga gttgcggggt aagaagctgc tggaagcccg gcggctcgtt
     1801 gagctgcgaa agcggcatgg caagcacaaa ggcgtcaccc gcaccgcacg ctcgcgtacg
     1861 cgtatgacct ctgcggcgct ggtcaatgcc tatcgcgccg aggcagagcg ccagaaggac
     1921 atgatcagcc gtgcgcaggt cacacgcagc agcctgctgt ttctcgatgc tgcgttcaag
     1981 tcgctgctga aggacgagaa ttttctgacg ctcttgcgcg ctgagggcct ggattccctg
     2041 ccgcgcattg tcgtcgatgg tctgggagag gccgcaacat gacacgtcca gacaaatcgc
     2101 ccaatgcgat aagccccggc ttcgagacag atttgctaag cgttccgatc gcgtcgatcc
     2161 tgccggtcaa acagttgcca gtgaccgtac ccaagagcca gaaatatgct cagattactg
     2221 cgtcgatccg cgaggtcggc ctgatcgaac cgccggtcat ctcacgcacc aaggggcaga
     2281 gcgatacttt cattctgctc gacggccacg tccggttgct cgtcctgaaa gaactgggcg
     2341 aggaaacggt cacatgcctt gtggcgactg atgacgaggc ctttacctac aacaagcgga
     2401 tcagccgcct agccacgatt caggaacaca agatgatcct tcgtgctgtc gaacgtggtg
     2461 tgcccgaggc ccggatcgct gccgcgctga atgtcgatgt ggcgctgatc cgtcgaaaac
     2521 ggaacctact gaatggaatc tgtgccgagg tggccgaaat gctcaaggcg cggcattgtc
     2581 cgatcaacag ctttcgggcc ctgcgcaaga tgaagcccct gcgccagatt caggcagccg
     2641 aactgatgat cgccgcgaac aactacacgg tggcttatgc cgaggccatt ctggctgcca
     2701 ccgatgcggc cgatctggtg gatccagcgg cgcgcaaatc acccgttggc gtcacgcgcg
     2761 aacaggccga acggatgaaa gccgagatgg ccagcctgca gaagaacatc aagttgatcg
     2821 aaggcacgct cggtcccgat cacttgcgtc ttgttgttgc gggccgttat gtcgaacggc
     2881 tcttgcagaa tgaccgcctc gtgcgatttc tcgaaaggaa ccatcaggaa attctgggcg
     2941 agttccgaca gatcgtcgct ggcctggctc agcccgcagt gccagaggtg gccgacggtt
     3001 agctgcaggt atcgggaaag tcaggatggg gacccggacc cgaaagcgcg gggaccgcag
     3061 gagacgccg
//
LOCUS       DTVW01001338            2908 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_891475, whole
            genome shotgun sequence.
ACCESSION   DTVW01001338 DTVW01000000
VERSION     DTVW01001338.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2908)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2908)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2908
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_891475"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..161
                     /gene="purU"
                     /locus_tag="EYO87_17710"
     CDS             <1..161
                     /gene="purU"
                     /locus_tag="EYO87_17710"
                     /EC_number="3.5.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005851123.1"
                     /note="produces formate from formyl-tetrahydrofolate which
                     is the major source of formate for PurT in de novo purine
                     nucleotide biosynthesis; has a role in one-carbon
                     metabolism; forms a homohexamer; activated by methionine
                     and inhibited by glycine; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="formyltetrahydrofolate deformylase"
                     /protein_id="HIC67793.1"
                     /translation="SAEDYVSLGRDVESQVLARAIHAHATHRVFPNGNKTVVFPASPG
                     SHSSERMG"
     gene            245..1240
                     /locus_tag="EYO87_17715"
     CDS             245..1240
                     /locus_tag="EYO87_17715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008553741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="taurine ABC transporter substrate-binding
                     protein"
                     /protein_id="HIC67794.1"
                     /translation="MTRQLGTAILALAAIGAASPALAQEPLTVAYFREWPMPFQFAKV
                     QGGYDEALGVPVNWVAFDSGTAMSAAMAAGDVQIAVSQGVLPFIAATSAGQDLKIIDI
                     AASYADNENCVVAAGLEIDKDSASELEGKRVAVPMGTGAQYTFLQLMGYLKVDTSTMS
                     IVDMAPAEGAAALSQGNVDMACGWGGALARMREFGNVLLTGAEKEAIGILSFDLITTT
                     GDFAAGQPRLLADFVAVTAQANAAWNAGDRRDEMLSVIARDAGMETAVAGDTIDDFVF
                     LSVDQLLSDAWLGGRVGTYLDGAAEFFRENGTVPEILPSYAALIDTGPLADVAGR"
     gene            1304..2110
                     /locus_tag="EYO87_17720"
     CDS             1304..2110
                     /locus_tag="EYO87_17720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011567272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIC67795.1"
                     /translation="MSGLTLTNISMRFDLANGAHVQALQDVSLDLRPGQLMSVLGPSG
                     CGKSTLLNIVAGFLAPTAGRVALNGHAVTGPDAERGVVFQQGALFEWMNVRDNVSFGP
                     RMAGQREAQFGPRVDHLIEVVGLQDFREKATYELSGGMQQRVALARCLANDPDVILMD
                     EPLGALDALTREKMQAMILDLWKETGKTIILITHSVEEALLLGERLIVMAPRPGRIYK
                     EYHLPFADQGVGQDLRQIKKRPDFAARREEILSMIWNMEEEIMGRQGDAA"
     gene            2107..>2908
                     /locus_tag="EYO87_17725"
     CDS             2107..>2908
                     /locus_tag="EYO87_17725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HIC67796.1"
                     /translation="MTGLALLLVYAGLFAAAALVVKLIRRRTGQRKDFTSLKTVTFGD
                     ESAIRPDRAASVISILVVFVLWGAFTGSRLVPFHVPGPFIGETGFAYQARGADGRPTS
                     GRVRVFAGIDAPADAAGDAVVASVPRGRDRLIPLPGGAQASAIDGTAIAPGGRVRVDH
                     GTVSMTAKGTLGFAADEGLQMEPIWLPSPEAVAGRFVEIARTGYQNFSLWEHLGASLM
                     RVLAGFALGSLVGIPLGYAMGLSGWFRGWFDPIVEFMRPVPPLALIPLV"
BASE COUNT          464 a          884 c         1045 g          515 t
ORIGIN      
        1 aatcggccga ggactatgtc agcctggggc gcgatgtcga aagccaggtt ctggcccgcg
       61 cgatccacgc ccacgccacc caccgcgtct tcccgaacgg caacaagacc gtcgtcttcc
      121 cggcctcgcc cggaagccat agcagcgaac gcatgggcta ggcagaggca ggtgatgatc
      181 cagtcggcaa gcagatcgac cgcaacgggc ccgcatcgcg cgccctacca acaaggagag
      241 aaagatgaca cgtcagctgg gcaccgccat acttgccctc gcagcgatcg gggcggcctc
      301 gcccgcgctt gcgcaggagc cgttgactgt ggcgtatttt cgggaatggc cgatgccgtt
      361 ccagtttgcg aaggttcagg ggggttatga cgaggcactg ggggtgccgg tgaactgggt
      421 cgcgttcgat tccggcacgg cgatgtcggc tgcgatggct gctggcgatg tgcagatcgc
      481 ggtcagccag ggggtgctgc ccttcatcgc ggcgacctcg gccggtcagg atctgaagat
      541 catcgacatc gcggcctcct atgccgacaa cgagaactgc gtcgtcgccg ccgggctgga
      601 aatcgacaag gacagcgcct cggaactgga gggaaagcgc gtcgccgttc cgatgggcac
      661 cggggcgcaa tataccttcc tgcaattgat gggatatctg aaggtcgaca cctcgaccat
      721 gtcgatcgtg gacatggccc cggccgaggg cgcggcggcg ctgtcgcaag gcaatgtgga
      781 catggcctgt ggctggggcg gcgcgctggc ccggatgcgg gaattcggca atgtgctgct
      841 gaccggcgcc gagaaggaag cgatcgggat cctgtccttc gatctgatca cgaccacggg
      901 cgacttcgcc gccgggcaac cccggcttct ggccgatttc gtggccgtca ccgcgcaggc
      961 gaacgcggca tggaacgcgg gcgacaggcg cgacgagatg ctgtcggtga tcgcgcggga
     1021 cgcgggcatg gaaaccgcgg tggcgggcga cacgatcgac gacttcgtgt tcctgtcggt
     1081 ggaccagttg ctgtcggatg cctggcttgg cgggcgcgtg ggcacctatc tggacggcgc
     1141 ggcggaattc tttcgcgaga acggaaccgt tcccgaaatc ctgccatcct acgccgccct
     1201 gatcgacacg ggcccgctgg ccgatgtggc cggccgctga tgatgatgac ggaaggcgtg
     1261 attgcgcctt ccgaccttgc tgcggcacca ggaaaacagc cccatgtccg gacttacatt
     1321 gaccaatatc tcgatgcggt tcgatctggc caacggcgcg catgtgcagg cgttgcagga
     1381 tgtctcgctc gacctgaggc cgggccagct gatgtcggtc ctggggccgt cgggctgcgg
     1441 gaaatcgacc ttgctgaata tcgtggcggg gtttctggcg ccgaccgcgg gccgcgtcgc
     1501 gctgaacggc catgcggtga ccgggccgga tgcggaacgc ggcgtcgtgt tccagcaggg
     1561 cgccttgttc gaatggatga atgtgcgcga caacgtgtcc ttcggaccgc gcatggcggg
     1621 ccagcgcgag gcgcaattcg ggccgcgcgt ggatcatctg atcgaggtcg tgggattgca
     1681 ggatttccgc gagaaggcga cctacgaatt gtccggcggc atgcagcagc gggtcgcgct
     1741 ggcgcgatgc ctggccaatg accccgatgt catcctgatg gacgagcctc tgggcgcgct
     1801 ggatgcgctg acgcgggaaa agatgcaggc catgatcctc gatctgtgga aggagacggg
     1861 caagaccatc atcctgatca cccattccgt cgaggaggcg ctgcttctgg gcgaaaggct
     1921 gatcgtcatg gccccgcgtc cgggccggat ctacaaggaa taccatctgc cctttgccga
     1981 tcagggggtc ggccaggatc tgcggcagat caagaagcgg cccgatttcg ccgcccgccg
     2041 cgaggagatc ctgtcgatga tctggaacat ggaagaagag atcatgggcc gtcaggggga
     2101 tgcggcatga ccggcctggc gcttctgctg gtctatgcgg gcctgttcgc ggccgccgcg
     2161 ctggtcgtga aactgatccg gcgcaggacc ggtcagcgca aggatttcac cagcctgaag
     2221 acggtgacct tcggcgatga aagcgcgatc cggccagacc gggcggcctc ggtcatctcg
     2281 attctcgtgg tcttcgtgct gtggggcgcc tttaccgggt cgcggctggt gccgttccat
     2341 gtgcccggcc ccttcatcgg cgagacgggc tttgcctatc aggcgcgggg cgcggatggt
     2401 cggccgacaa gcggccgggt ccgggtcttt gccgggatcg atgcgcctgc ggacgcggcc
     2461 ggggatgcgg tcgtggcgtc ggtgccgcgc gggcgcgacc ggttgatccc gttgcccggg
     2521 ggcgcgcagg ccagcgccat cgacggcacc gccatcgccc ccggcggcag ggtccgcgtg
     2581 gatcatggca cggtgagcat gaccgccaag ggcacgctgg gctttgccgc cgacgagggg
     2641 ttgcagatgg agccgatctg gctgccctcg cccgaggccg tggccggccg tttcgtcgag
     2701 atcgcgcgga ccggctacca gaatttcagc ctgtgggaac atctgggcgc ctcgctgatg
     2761 cgggtgctgg cgggctttgc cctgggatcg ctggtgggca ttccgcttgg ctatgcgatg
     2821 gggttgtcgg gctggttccg cggctggttc gatccgatcg tggagttcat gcgcccggtg
     2881 ccgcccctgg cgctgatccc gctggtca
//
LOCUS       DTVW01001339            1109 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_897547, whole
            genome shotgun sequence.
ACCESSION   DTVW01001339 DTVW01000000
VERSION     DTVW01001339.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1109)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1109)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1109
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_897547"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            28..1056
                     /locus_tag="EYO87_17730"
     CDS             28..1056
                     /locus_tag="EYO87_17730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67797.1"
                     /translation="MDTVFWRSPGREERFLKFCLFQSLLTGKRPKTSAAQTRTGIPVE
                     LRGYEKAYGLRVYTRIANLNAANPETAAHYNYAAAAAFYAAILAPENSDFADLALQFY
                     GTGMQAFPGNLMLRFNGACVQGSLGHKNRASANFMTVIDQGSELDFDAARDAPLSHRV
                     RVLSDLFPFSDFYGAAAGHGAGGANPRSIVKSAAMTFLASDALDEDRLDEALGLLDAA
                     AVLFDRSAPVWRLLARARRADGSDAVSVRQAFYRAVNLYPGELPGLLRIGIEAELASG
                     RAAEAADILRRWTLVASRVTLGDGQGYGLSPETLSVAGDHKALLGGWTRTCLDRILDA
                     GISGSGRE"
BASE COUNT          193 a          333 c          363 g          220 t
ORIGIN      
        1 gcggccgagg attattcagc ggcggacatg gacacggtgt tctggcgctc gcccgggcga
       61 gaggaacggt ttttaaaatt ctgtctgttt cagagcctgc tgactgggaa acggccaaaa
      121 acgtcagccg cgcaaacgcg caccggtatt ccggttgagt tgcgcggtta cgagaaggcg
      181 tacgggctac gggtttacac ccgcatcgcc aatctgaacg ccgccaaccc ggaaacggcg
      241 gcccattata attacgccgc ggcggccgcc ttttacgccg ctatccttgc cccggaaaac
      301 agcgatttcg cggacctggc cctgcaattc tatggcaccg gcatgcaagc ctttcccggc
      361 aatctgatgc tgcgctttaa cggcgcctgc gtgcaaggga gcctgggcca taagaaccgg
      421 gcctcggcca atttcatgac cgtgatcgac cagggatcgg agcttgattt cgatgccgcc
      481 cgggacgccc cgcttagcca ccgggtacgc gtgctatccg atcttttccc gtttagcgat
      541 ttctatgggg ccgccgccgg tcacggcgcc ggcggcgcca atccaagaag catagtgaaa
      601 agcgccgcca tgacctttct cgcctccgac gcgctggacg aggatcgcct ggatgaggcg
      661 ctcggcctgt tggacgcggc ggcggttttg tttgaccgct cggcgccggt ctggcgtttg
      721 ttggcccgcg cccgccgagc cgacggatcg gacgcggtat cggtgcgcca ggcattttac
      781 cgcgccgtaa acctctaccc cggtgaattg ccgggccttt tgcggattgg tatcgaggcc
      841 gagttggcca gcgggcgggc cgccgaggcc gccgatattc tgcgaaggtg gacgctggtg
      901 gcatccaggg tcactttggg cgatggccag ggatatgggc tgtcgccgga aacattgtcg
      961 gtcgccggag accataaagc gttgctgggc ggttggacgc ggacctgtct ggaccgtatc
     1021 ctggatgcgg gcatttccgg atcgggccgg gaatgatcgt ctgacgggca agagggccag
     1081 cggtgaactt cacggtttcc atcaccaca
//
LOCUS       DTVW01001340            5096 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_898066, whole
            genome shotgun sequence.
ACCESSION   DTVW01001340 DTVW01000000
VERSION     DTVW01001340.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 5096)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5096)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5096
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_898066"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..200)
                     /locus_tag="EYO87_17735"
     CDS             complement(<1..200)
                     /locus_tag="EYO87_17735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008069357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="J domain-containing protein"
                     /protein_id="HIC67798.1"
                     /translation="MADPYSTLGVAKNASEAEIKSAYRKLAKELHPDRNKENPKASEK
                     FSDVTKAYDLLSDKEKRTQFDRG"
     gene            333..914
                     /gene="pdxH"
                     /locus_tag="EYO87_17740"
     CDS             333..914
                     /gene="pdxH"
                     /locus_tag="EYO87_17740"
                     /EC_number="1.4.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010404853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase"
                     /protein_id="HIC67799.1"
                     /translation="MTTTDPFALFDLWYGEARASEPNDSNAMALATATADGHPSVRMV
                     LLKGHGPDGFVFYTNLDSRKGGELAANPHVALLFHWKSLRRQIRIEGPVSTVDDATAD
                     AYFATRSRDSQLGAWASQQSRPLDARESFESRFAEMQARFEGQDVPRPPRWSGWRVTP
                     ERIEFWQDRAHRLHERTLFVRAGDGWTSGLLYP"
     gene            911..1726
                     /locus_tag="EYO87_17745"
     CDS             911..1726
                     /locus_tag="EYO87_17745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003047965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhzF family phenazine biosynthesis protein"
                     /protein_id="HIC67800.1"
                     /translation="MSWRRLPITRVDAFAERAFEGNPAAVMPLDEWMSDAMLQAIAAE
                     NNLSETAFVVPDETSEADYELRWFTPKQEVALCGHATLASGHVLLTTAQWRGDMRFRT
                     RHAGILVVARDDEDGYRMRLPAYRPEPKPLAKIAAAVGGSPVETLWHEGRYALLVYAD
                     PREVRALAPDMAALKALGDVQAIATADGAGDPAGADVVSRVFVPSAGIDEDPVTGSAH
                     CVLTPYWTRRLARDRFTAWQASERGGRVGCHIDGDQVELSGRCVTTLTGEFLL"
     gene            1797..2093
                     /locus_tag="EYO87_17750"
                     /pseudo
     CDS             1797..2093
                     /locus_tag="EYO87_17750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017928559.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate ABC transporter substrate-binding
                     protein"
     gene            2160..3365
                     /gene="pstC"
                     /locus_tag="EYO87_17755"
     CDS             2160..3365
                     /gene="pstC"
                     /locus_tag="EYO87_17755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010392517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease subunit PstC"
                     /protein_id="HIC67801.1"
                     /translation="MPMSWALFIAAVLAAAGYLVGRGRAFSVAGPDVRDLHSRPVYHG
                     AGVALLTLTPAVAVLVVAAGLRMTGILTAEAGTLVGVFAIAASLAGLGWGVSRIGVGF
                     KARNTVEAIVLGLLILCSTIAILTTAGIVLSMLFETGSFFRKYSWTDFFFGTEWTPRF
                     QGNSRLGLLPLLWGTLYISLIALLVAVPIGLFAAIYMSEYATRRVRAIAKPAIEVLAG
                     IPTIVYGLFALITVGPMLRDYFAQPLGLGNSGSSVLTAGLVMGIMLIPFVSSLSDDII
                     NAVPQSLRDGALGLGSTPSETIRQVVLPAALPGIVGAVLLAASRAIGETMIVVLGAGA
                     AARMSLNPFEAMTTITVKIVSQLTGDNDFAAPETLVAFALGLTLFVITLGLNIVALYI
                     VRKYREQYE"
     gene            3362..4714
                     /gene="pstA"
                     /locus_tag="EYO87_17760"
     CDS             3362..4714
                     /gene="pstA"
                     /locus_tag="EYO87_17760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011750554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease PstA"
                     /protein_id="HIC67802.1"
                     /translation="MTDLPISAGGDARPRSSLLVADARTRRRNAAERRFRRYGAIAIG
                     VAMVALVVLLTTIISGGAGAFRQTYLSIPVALPAAKLDPKGNRDPGEMAKVLTLTYGP
                     VLDTAVEQAIADTGIQIPDLSAKDIDGLISREASAQLRNRVLANPDLIGQVVDVNVLV
                     NGRVDGYFKGRVSMESAAADNNTSPRQLQLAEALRDRGLLVTRFNWNFLTNPDASDQR
                     PEAAGVGVAILGSLYMMLVVLFLAVPIGVGASIYLEEFAPRNRWTDVIEVNISNLAAV
                     PSIVFGILGLAAFINFAGLPQSAPIVGGLVLTLMTLPTIIISTRAALKAVPPSIRDAA
                     LGVGASKMQSVFHHVLPLAMPGILTGTIIGLAQALGETAPLLLIGMVAFVKNFPAAPP
                     EGLFDPASALPVQVYNWTQRADPAFIERASGAIIVLLVLLMCMNLLAIWLRRRFERRW
                     "
     gene            4735..>5096
                     /locus_tag="EYO87_17765"
     CDS             4735..>5096
                     /locus_tag="EYO87_17765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007254198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HIC67803.1"
                     /translation="MYDTNRPESAVNQLNNKISARGVQVFYGDTHAIKDVDVDILDKT
                     VTAFIGPSGCGKSTFLRCINRMNDTIPICRVEGRITLDHEDIYDRRVDPVQLRAKVGM
                     VFQKPNPFPKSIYDNVAYG"
BASE COUNT          823 a         1658 c         1639 g          976 t
ORIGIN      
        1 ccgcgatcga actgcgtgcg cttttccttg tcggacaaca ggtcataggc tttggtgacg
       61 tcggagaatt tctccgacgc cttcggattt tccttgttcc ggtcgggatg cagctctttt
      121 gcaagcttgc gataagcgga tttgatttcc gcttcgctcg cgtttttcgc cacgccgagg
      181 gtggaatagg gatctgccat ctgtctcctg tagcccgata agtgactggc cgtgaagggc
      241 cgattgcgag ccatgtggta atggccgcgc agagggtcaa gttcccgacg cttttgctcg
      301 accagaggcg cgacgcggag tattgagccg gcatgacgac gaccgatcct ttcgcgctat
      361 tcgacctatg gtatggcgag gcacgcgcga gtgaacccaa tgacagcaat gcgatggcgc
      421 tggcgaccgc gacggcggac ggccatccgt cggtgcggat ggtcctgctg aaagggcatg
      481 gccccgacgg gttcgtcttc tacaccaatc tcgacagccg caagggcggc gaacttgcgg
      541 cgaacccgca tgtcgcactg ctctttcact ggaagtcgct gcgccgacag attcgcatcg
      601 aaggcccggt atcgaccgtc gacgacgcaa ccgccgatgc ctatttcgcg acgcgcagcc
      661 gcgacagcca gctcggcgcc tgggccagcc agcagtcgcg tccgctcgac gcgcgtgaaa
      721 gcttcgaaag ccgctttgcc gaaatgcagg cgcgcttcga aggacaggac gtgccgcgtc
      781 cgccacgctg gtcgggctgg cgcgtgacgc ccgagcgaat cgaattctgg caggaccggg
      841 cgcatcgcct gcacgaacgc acgttgttcg tgcgcgcggg cgatggctgg acgagcggac
      901 tgctctaccc atgagctggc gccgcctgcc gatcacgcgc gtcgacgcct ttgccgagcg
      961 ggcgttcgag ggaaatccgg cggccgtcat gccgcttgat gagtggatga gcgacgcgat
     1021 gcttcaggcg atcgcggcgg agaataatct gtccgaaacc gccttcgtcg ttcccgacga
     1081 aacgagcgag gccgattacg aactgcgctg gttcacgccc aagcaagagg tcgcgctgtg
     1141 cggccacgcg acgctggcga gcggacatgt gctgctgacc accgcccagt ggcgcggcga
     1201 catgcgtttt cgcacgcgcc acgcgggcat cctcgttgtc gcgcgcgatg acgaggacgg
     1261 atatcgcatg cgcctgcccg cctatcgccc cgaacccaag ccgctggcga agatcgcggc
     1321 cgcggtcggc gggtcgccgg tcgaaacgct gtggcatgag gggcgctatg cgctgctcgt
     1381 ctatgccgat ccgcgcgagg tgcgcgcgct ggcgcccgac atggcggcgc tcaaggcgct
     1441 gggcgacgta caggcgatcg ccaccgccga cggcgcgggc gacccagcag gcgccgatgt
     1501 cgtgagccgc gtgttcgtgc caagcgcggg gatcgatgaa gatcccgtca ccgggtcggc
     1561 gcactgcgtc cttacccctt attggacgcg ccgactggcg cgcgaccgct ttaccgcctg
     1621 gcaggcgagc gagcgcggcg ggcgagtcgg ctgtcatatc gacggcgatc aggtcgagct
     1681 ttcgggtcgc tgcgtcacga cgctgaccgg cgaattcctg ctctgacgat cgcggcgtag
     1741 cgccttagag cgcggcagtc agatcggcga gatggcggcg gagcgccggg aactgcctgt
     1801 ccttctacga aaacaacatg gacaagctga aggtgggcac catgtcgggc gtcgcgcctt
     1861 cgaccgagac gatcgcctct ggcgaatacc cggtttcacg accgctgtat ttctatgtca
     1921 agaaacagca tatcggcacg attccggggc tggaggatta tgtccagttc ttcgtctcgg
     1981 acgcgctggc cggtccggat ggtccgctgg cccagtatgg ccttgtctcg gatcctgaac
     2041 tggccgcgac gcaggacgcc gtggccaacc agacaaccat cgacatgccc tgaccgggcg
     2101 ccgggcgacg cgggtccgcc tcgcgccgcc cctccttgct tcgccaagag gaaatcccga
     2161 tgccgatgtc ctgggcgctt ttcatcgcag cagtcctggc cgccgccggt tatctggttg
     2221 gtcgcggccg cgcattctcg gtcgctggcc cggatgtccg cgatctgcac agtcgccccg
     2281 tctatcatgg cgccggcgtc gcgctgctga ccctgacccc ggctgtcgcc gtgctggtcg
     2341 ttgccgcggg gctgcgcatg acgggtatcc tgacggccga ggccggaacc cttgtcggcg
     2401 tttttgccat cgcggcttct ctggccgggc ttggctgggg cgtcagccgg atcggcgtcg
     2461 gcttcaaggc gcgcaacacg gtcgaagcga tcgttcttgg tctgctgatc ctgtgctcga
     2521 ccatcgccat cctgaccacg gcggggatcg tgctgtcgat gctgttcgag accggcagct
     2581 tctttcgcaa atacagctgg accgacttct tcttcggcac cgaatggacg ccgcgctttc
     2641 agggaaactc ccggcttggc ctcctgccgc tgttgtgggg cacgctgtat atcagcctga
     2701 tcgccctgct ggtcgcggtg cccatcgggc ttttcgccgc gatctacatg tccgaatatg
     2761 ccacgcgccg ggtgcgcgcc atcgccaagc ccgcgatcga ggttcttgcc ggcatcccca
     2821 ccatcgtcta cggccttttc gcgctgatca cggtcggacc gatgctgcgc gactatttcg
     2881 cccagccgct gggccttggc aattccggat cctcggtgct gacggcggga ctggtcatgg
     2941 ggatcatgct gatccccttc gtcagttcgc tcagcgacga catcatcaac gccgtcccgc
     3001 agagcctgcg cgatggcgcg cttggccttg ggtccacacc ctccgagacc atacgccagg
     3061 tcgtcctgcc cgccgccctt ccgggaatcg tgggcgcggt cctgttggcg gcgtcccgcg
     3121 ccatcggaga gacgatgatc gtggtcctgg gtgccggtgc cgcggccaga atgagcctga
     3181 atcccttcga ggcgatgacg acgattaccg tcaagatcgt cagccagctg accggcgaca
     3241 acgatttcgc tgcgcccgag acgctggtcg cctttgccct cggcctgacc ctgttcgtga
     3301 tcacgctggg gttgaacatc gtcgcattgt atatcgtgcg caaatatcgc gagcagtacg
     3361 aatgaccgat cttccgatct ccgcaggcgg tgatgccaga ccgcgatcct cgttgctggt
     3421 ggccgatgcc cgcacccgcc gccgcaacgc cgccgagaga cggtttcgcc gctatggcgc
     3481 catcgccatc ggcgtggcca tggttgcgct ggtcgttctg ctgaccacga tcatctccgg
     3541 cggtgccggc gcctttcgtc agacctatct ttcgatcccg gtcgccctgc ccgccgcaaa
     3601 gctggatccc aagggcaacc gcgacccggg cgagatggca aaggttctga cgctgaccta
     3661 tgggccggtt ctggacacgg cggtcgaaca ggcgatcgcc gataccggca tccagatccc
     3721 cgacctgtcc gcgaaggata tcgacgggct gatttcacga gaggcgtcgg cgcagttgcg
     3781 caaccgggtg ctggccaatc ctgacctgat cgggcaggtg gtcgatgtga acgtgctggt
     3841 gaacggccgg gtggatggct atttcaaggg ccgcgtcagc atggaaagcg ccgccgccga
     3901 caacaacacc tcgccccgtc agctccaact ggccgaggcg ttgcgcgacc gcggcctgct
     3961 ggtgacgcgc ttcaactgga atttcctgac caatcccgat gcctcggacc agcggcccga
     4021 agccgcgggc gtgggcgtgg cgatcctggg ttcgctctac atgatgctgg tggtgctgtt
     4081 cctggccgtg cccatcggcg tcggagccag catctatctt gaggaattcg cccccaggaa
     4141 ccgctggacc gacgtgatcg aggtcaatat ctcgaatctc gccgccgtgc cgtcgatcgt
     4201 cttcggcatc ctcgggctgg cggccttcat caacttcgcc ggattgccgc aatcggcgcc
     4261 catcgtcggc ggcctcgtgc tgacgctgat gacgctgcct acgatcatca tctcgacccg
     4321 cgcggcgctg aaggcggtgc cgccctcgat ccgcgatgcg gcactcgggg tgggggcgtc
     4381 aaagatgcag tcggtctttc atcacgtcct gccgctggcc atgcccggca tcctgaccgg
     4441 aaccatcatc gggctggcgc aggccctggg cgagacggcg ccgctgctgc tgatcggcat
     4501 ggtcgccttc gtcaagaact tcccggcggc gccgccggag ggtctgttcg accccgcctc
     4561 ggccctgccc gtgcaggtct ataactggac ccagcgggct gatcccgcct tcatcgagcg
     4621 tgcctcgggc gcgatcatcg tgctgttggt cctgctgatg tgcatgaacc tgctggcgat
     4681 ctggctgcgc cgccggttcg aacgccgttg gtaatccggg cgaaggagga caatatgtac
     4741 gacacgaacc gcccggagag tgcagtgaac cagttgaaca acaagatttc ggcaaggggt
     4801 gtgcaggtct tttacggcga tacacatgcc atcaaggacg tggatgtcga tatcctcgac
     4861 aagaccgtga cggccttcat cggcccctcg ggttgcggca agtcgacctt tctgcgctgc
     4921 atcaaccgga tgaacgacac catcccgatc tgccgcgtcg aaggcaggat cacgctggac
     4981 cacgaggata tctacgaccg tcgcgtcgat ccggtgcaat tgcgcgccaa ggttggcatg
     5041 gtgttccaga agccgaaccc gtttcccaaa tccatctacg acaatgtggc ttacgg
//
LOCUS       DTVW01001341            5918 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_900809, whole
            genome shotgun sequence.
ACCESSION   DTVW01001341 DTVW01000000
VERSION     DTVW01001341.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 5918)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5918)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5918
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_900809"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            1..76
                     /locus_tag="EYO87_17770"
                     /pseudo
     CDS             1..76
                     /locus_tag="EYO87_17770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020065573.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
     gene            69..671
                     /locus_tag="EYO87_17775"
                     /pseudo
     CDS             69..671
                     /locus_tag="EYO87_17775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011536552.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome partitioning protein"
     gene            745..1752
                     /locus_tag="EYO87_17780"
     CDS             745..1752
                     /locus_tag="EYO87_17780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013959934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome partitioning protein"
                     /protein_id="HIC67804.1"
                     /translation="MAKRRRLTPAAPSGGETGSEDQMGYPLGVAPTRDIHSPPVARIA
                     GDAATRAALEDLAAEMRSAREGGRMVQDLPLDRIEAGHLTRDRMIFGAEDMAALKASI
                     AARGQQTPIEVVALRDGRFGLISGARRLSALRALHEETGEDRFGQVRALLRPFDAAPD
                     AYLAMVEENEIRADLSFYERARLAHEAARIGVFPDAGAAVKALFVHVSASKRSKILNF
                     VALHQALGAALRFPEAIPEHLGLALAKRAAADPDFAPGLARRLASRAPTDAAGERAVL
                     DRALAPAPKEAAQKATQDAGADQPEGVQMTARPGRIILSGQGVTPDLARDLQDWLAAR
                     G"
     gene            complement(1880..5041)
                     /locus_tag="EYO87_17785"
     CDS             complement(1880..5041)
                     /locus_tag="EYO87_17785"
                     /inference="COORDINATES: protein motif:HMM:PF13229.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013281101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="right-handed parallel beta-helix
                     repeat-containing protein"
                     /protein_id="HIC67805.1"
                     /translation="MLIQDLLVTLPGLLGSASRIDGIDAARQSGASSTSLLVAQPAAS
                     QTLSLSGSPAITTAPLASFDQSPFDRASATTGPNLLDFYQAQKIDFDNPVAPDRTSPP
                     VDQGPGETPGDPDGIPVDPVPDPGETPIDPNPGETPVDPDPVPDPGGAPDLSVDLTTE
                     VQAEAGRVLTITPPDADAAIDNIRILSQSDHGQVSVNPDNTLALVLSEDPGNTDPTDF
                     SYEITYQNGATRTVRTDVAITEGTQQKGWSLGDYYMLEEGRDGKAVTEYGENHRKVYV
                     TASDDGLSRAEIARAEGVSEKTVTAAWLAQRPEYGATPDKALNPDIGMELWQDLTAAS
                     KGPSSNWLLFERGQEYADVTRVVTRGSSGESALNPLVIGAYGEGSDPVIGGSVDVFQD
                     PSSNVVVRDIDIDGMLALWGSNLLFDNVSFYGSGGSVQGIDRITIRNSDFVDIVRDEP
                     VDGGDTWNPHINRAGGIYVSETNGLLLEQNLFDHNGWADGYDYNLSADSPMPPSMFSQ
                     NAYLDYNNSDVTFRDNITMRAASFGAQIRSGAFIEDNSFIDNNAAVNFLGGDSYNKGP
                     LGHYTLMLDNLVTSAGHKRAAAMEGGLSIGIDNAGYQTALIGNIVAQLADPGNPAEIA
                     EKSVNHNALKSSQDPAWDDTIIYNWATTPEGERRNPDANTAGLDPAILDATTIQNFAA
                     NLLGRETASIADLGDYLRDQADGRLDRVVDADLINAFFREGFGLSTELRGAEATLRFI
                     PDDRGEGMRWDNRLNWDTGDLPGTQDGDSVDLGGNRVLFGAQTVAVDDFVFGDYGSLK
                     ATSGRLGIEGGVSVAETGARLEIGNAGQVWMANYLDSDRLEIDLTGGRFANTGAFAGA
                     TGISLGGDGQALLATSGASFDLRDGSSITIAGSAAKAGFDGGDGGSAVLRMNEGADLA
                     FTADETGFGKLAEFRSGAFDTSKVTSGIRLDGNLSIDLSEWKADPKAQKWVLVDVDQM
                     IGKFDDLTITGMARNRDALVRVDYVSDTVTLTLSDNGQGSGRVRMVEAGEADFIDYSN
                     DAALTSLWDDLHKAAPEISDLPI"
     gene            5034..5240
                     /locus_tag="EYO87_17790"
     CDS             5034..5240
                     /locus_tag="EYO87_17790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67806.1"
                     /translation="MSMLSLVCGDGFREIAQNSFFYFTDSSIPEPDRKSEMPRKDRRL
                     AAENRRLKPAQPGQIKQLSGGPEK"
BASE COUNT          944 a         1902 c         2019 g         1053 t
ORIGIN      
        1 gatcttcacc gacttccatg aactgaacgg cgaccgtgcg tttgccgacg atctgtcgat
       61 cgtgggcggt ctggcgcatg gcctcgcgcg gctggaagct gtgggacgcg ctgaccgaga
      121 cgctggcggc cgatggcgtg ctggaagatt acgacctgat cttcatcgat acgccgccgg
      181 cgcttggcta tctgaccatc aacgggctgg ccgcggccga tatcgtgctg gtgcccttcg
      241 gcgcctcgtt tttggaattc gattcgacgg ggcggttctt cgacatgctg cattcgacct
      301 ttgccagcat cgaggagggc gagaatgtcg ccgcccgcgc cctgggccgg ccggaactgc
      361 atttcgaatg ggacgcgatc cgggcggtga tgacgcgcta cgatgccggc cagcaggccg
      421 agatggcggg gctgatccag tcctatctgg gccagaccct gtcgccgcac cggcaggatt
      481 tcaccgccct gatcgggcag gcgggcgaac aggtccacgg catctacgag gccgattacc
      541 gcgatttcaa ccgcgagacc tatgcccgcg gccgcgagac cttcgaccgc acctatgccg
      601 ccttcaagtc gctgcttctg ggcatctggc ggcgcgagga gaaggcgcag gaggatgcgg
      661 gcgttgcctg agcgcgcgcc gcgttaggat ttgatgaacc gccccgccct atccctgggg
      721 ccgggcgcgc gaggaggacc gatcatggcc aagcgcagac gcctgacacc ggccgcccca
      781 tccggcggcg agacaggatc ggaggatcag atgggctatc ccctgggcgt ggcgccgacg
      841 cgcgacatcc attccccgcc ggtggcgcgg atcgcgggcg atgcggcgac gcgcgcggcg
      901 ctggaggatc tggcggccga gatgcgcagc gcccgcgagg gcgggcgcat ggtgcaggat
      961 ctgccgctgg accggatcga ggccgggcac ctgacccgcg accggatgat cttcggcgcc
     1021 gaggacatgg cggcgctgaa ggccagcatc gccgcccgcg gccagcagac cccgatcgag
     1081 gtggtggcgc tgagggatgg ccgtttcggc ctgatctcgg gggcgcggcg gctgagcgcg
     1141 ctgcgcgcgc tgcacgagga gaccggcgag gaccgcttcg gccaggtgcg cgcgctgctg
     1201 cgcccctttg atgccgcgcc cgacgcctat ctggcgatgg tcgaggaaaa cgagatccgc
     1261 gccgatctgt ccttctacga acgggcccgg ctggcccatg aggcggcgcg gatcggcgtc
     1321 tttcccgatg ccggcgcggc ggtgaaggcg ctgttcgtgc atgtctcggc ctcgaaacgc
     1381 tcgaagatcc tgaatttcgt ggccctgcac caggcgcttg gcgcggcgct gcgtttcccc
     1441 gaggcgattc ccgaacatct gggcctggcg ctggcgaaac gcgccgccgc ggatccggat
     1501 ttcgcgcccg gcctggcgcg caggctggca tcgagggcgc cgaccgatgc ggccggggaa
     1561 cgggcggtgc tggaccgcgc tttggcgccg gcgccgaaag aggccgcgca gaaggccacc
     1621 caggatgccg gcgcggatca gcccgaaggc gtgcagatga cggcgcggcc ggggcggatc
     1681 atcctcagcg ggcagggcgt gaccccggat ctggcccgcg acctgcagga ctggctggcg
     1741 gcgcggggct gatctttcgc atgcgaaaat cccgcccgcc gggaacggca tccggatcgc
     1801 cggttttcgc atgcgaaaag ggccgccccg tcggggcggc ccttgatggt tcggccggcg
     1861 gcctttcgca tgcgaaagat cagatcggca gatcgctgat ttcgggcgcg gccttgtgca
     1921 gatcgtccca cagcgatgtc agggcggcat cgttggaata atcgatgaaa tcggcctcgc
     1981 ccgcctcgac catgcgcacc cggcccgaac cctggccgtt atcgctgagc gtcagcgtga
     2041 cggtatccga gacataatcg acccggacca gcgcatcgcg gttcctggcc atgccggtga
     2101 tggtcagatc gtcgaacttg ccgatcatct ggtcgacatc caccagcacc catttctgcg
     2161 ccttgggatc ggccttccat tcggacaaat cgatgctgag attgccgtcc agccggatac
     2221 ccgaggtcac cttcgaggtg tcaaaggccc ccgaccggaa ttcggccagc ttgccgaagc
     2281 ccgtttcatc ggcggtgaag gccagatccg cgccctcgtt catgcgcagc accgcgctgc
     2341 cgccatcgcc gccgtcgaag cccgccttgg ccgcgctgcc ggcgatcgtg atgctgctgc
     2401 cgtcgcgcag atcgaagctg gccccggagg tggccagcag cgcctgcccg tcgccgccca
     2461 ggctgattcc ggtcgccccc gcgaaggcgc cggtattggc gaagcggccg ccggtgaggt
     2521 cgatctccag ccggtcgctg tccagataat tcgccatcca gacctgcccg gcattgccga
     2581 tctccagccg cgcgccggtt tcggcgaccg aaaccccgcc ctcgatgccg agccgcccgg
     2641 acgtcgcctt cagcgagccg taatcgccga agacgaaatc gtccacggcg acggtctggg
     2701 cgccgaacag cacccggttg ccgcccagat cgacgctgtc gccgtcctgc gtgccgggca
     2761 ggtcgccggt atcccagttc agccggttgt cccaccgcat cccctcgccg cgatcatcgg
     2821 ggatgaagcg cagcgtggcc tcggcgccgc gcaattcggt cgagaggccg aatccttcgc
     2881 ggaagaaggc attgatcaga tcggcatcga cgacgcgatc cagcctgcca tcggcctggt
     2941 cgcgcaggta atcgcccaga tcggcgatgc tggccgtctc gcggcccagc aggttcgcgg
     3001 cgaagttctg gatcgtggtg gcgtcgagga ttgcgggatc cagcccggcg gtattggcgt
     3061 cgggattgcg cctctcgccc tcgggcgtcg tggcccagtt gtagatgatg gtatcgtccc
     3121 aggcgggatc ctggcttgat ttcagggcat tgtggttgac cgatttctcc gcgatttccg
     3181 ccggattgcc gggatcggcc agttgcgcga cgatgtttcc gatcagcgcg gtctgatagc
     3241 cggcattgtc gatcccgatc gacaggccgc cctccatcgc ggcggcccgc ttgtggccgg
     3301 ccgaggtgac gagattgtcc agcatcagcg tgtaatggcc cagcggcccc ttgttgtagc
     3361 tgtcgccgcc cagaaagttc accgcggcgt tgttgtcgat gaagctgtta tcctcgatga
     3421 aggcgccaga gcggatctgg gcaccgaacg acgccgcccg catggtgatg ttgtcgcgga
     3481 aggtcacgtc gctgttgttg tagtcgagat aggcgttctg gctgaacatg ctgggcggca
     3541 tcggcgaatc cgccgagagg ttgtaatcgt agccatcggc ccagccgtta tggtcgaaga
     3601 ggttctgttc aagcagaagc ccgttggttt cggagacata gatgccgccg gcgcggttga
     3661 tatggggatt ccaggtatcg ccgccatcca cgggttcgtc gcgaacgata tcgacgaaat
     3721 cgctgttgcg gatggtgatc cggtcgatgc cctggaccga gccgccgctg ccatagaacg
     3781 agacattgtc gaacagcagg ttgctgcccc acagggccag catgccgtcg atgtcgatat
     3841 ccctgacgac gacattcgaa ctgggatcct ggaagacatc gaccgacccg ccgatgaccg
     3901 gatcgctgcc ctcgccatag gcgccgatga ccagcggatt gagcgcgctt tcccccgagg
     3961 atccccgcgt caccacgcgc gtgacatcgg cgtattcctg accgcgttcg aacagcagcc
     4021 agttcgagct cggccccttc gaggcggccg tcaggtcctg ccacaattcc atgccgatat
     4081 cggggttcag ggccttgtcc ggcgtcgcgc cgtattcggg acgctgtgcc agccaggcgg
     4141 cggtgacggt cttttcggac acgccttccg ccctggcgat ctcggcccgg ctcagcccgt
     4201 catcgctggc cgtgacatag accttgcggt gattctcgcc atattcggtc acggccttgc
     4261 cgtcgcggcc ttcctccagc atgtagtaat cgccaagcga ccagcccttc tgctgcgtgc
     4321 cctcggtgat cgcgacatcc gtcctcaccg tccgggtggc gccattctgg taggtaatct
     4381 catagctgaa atcggtcgga tcggtattgc ccggatcctc ggacaggacc aaagccagag
     4441 tgttgtcggg attgacgctg acctggccgt gatcggactg cgacaggatg cggatattgt
     4501 cgatggcggc atcggcgtcc ggcggcgtga tcgtcagcac gcggccggct tcggcctgca
     4561 cctcggtggt cagatcgacc gaaaggtcgg gggctccgcc cggatccggg accggatccg
     4621 gatcgacggg ggtttcgccc ggattcggat caatgggggt ttcgcccgga tccgggaccg
     4681 gatcgacggg aattccgtcc ggatcccccg gcgtttcacc cggaccctgg tccacgggcg
     4741 ggctggtcct gtcgggggcc acgggattgt cgaaatcgat cttctgggcc tgatagaaat
     4801 ccagcagatt cggtccggtc gtcgcgctgg cccggtcgaa gggggattga tcgaagctgg
     4861 caaggggggc tgtcgtgatg gccggcgatc cggaaagcga cagggtctga ctggccgcgg
     4921 gctgggcgac aagcagagag gtgctggacg cgccgctttg ccgcgccgcg tcgatgccat
     4981 cgatcctcga cgccgagccg agcaatccgg gcagggtgac gaggaggtct tgaatgagca
     5041 tgctgagcct tgtttgtggt gatggtttcc gcgaaattgc acaaaacagt tttttctact
     5101 ttacggattc cagcatcccg gaaccggacc ggaaaagcga gatgccgcga aaggatcggc
     5161 ggcttgccgc tgaaaaccgg cggctgaaac ccgcgcaacc aggacaaatc aagcaattgt
     5221 caggcggtcc ggaaaaatga ccctgcgtca gggagatcgc cagcccgcgc cgcggcggcc
     5281 gtcccggggt ccggttcgcg caccagcgcg gcaggcaggc gaaccgcccc gcgcatggcg
     5341 ccctgcacgc cccgatcccg atccggtgac ggccgggccg ggccgaaccg gccgccgaac
     5401 ggcaaggctt cgccccgcca tcttcgataa gccgacctta tcgggggtgg cggggcattc
     5461 cggcttttgt cgcagtgatc cgcaattcgg cttcgtgctg cggatcatga ggttttcaga
     5521 tcgcaaaacc cggtatcgct ttcggctttg catcggcgcc agccggtctc tggcgctgtg
     5581 tccgggcctg gctggccgag atccttcgca ggcagcacac gcggaaagtg tggccatctt
     5641 gcgcaagatc cgggccgggg cgggaaaaag atcgctggcc cgacgcttgt gatttgatcg
     5701 cccggggccg gaaggctagg gctgggcctg tcttgcatgg ggcatggttc gatgactcgc
     5761 agcgccgcca cccagatcgc cggttatctg accacgggtt tctatcgcga catgggctat
     5821 gcggcgccgc ccttcgacag gcaggccggc gacgggctga cggtctggat ggatctgtcg
     5881 gaccgggccg atcgcgtcat cgtgcgactg gcgctgga
//
LOCUS       DTVW01001342            4826 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_919656, whole
            genome shotgun sequence.
ACCESSION   DTVW01001342 DTVW01000000
VERSION     DTVW01001342.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 4826)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4826)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4826
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_919656"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..248)
                     /locus_tag="EYO87_17795"
     CDS             complement(<1..248)
                     /locus_tag="EYO87_17795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007859657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrodipicolinate synthase family protein"
                     /protein_id="HIC67807.1"
                     /translation="MEPKRFTGLLVPAITPFRADLSPDGDAFVEFCKWLLANGANGLA
                     VFGTTSEANSLSLAERMALLEKLVAAGVPADVLMPGVGL"
     gene            481..1164
                     /locus_tag="EYO87_17800"
     CDS             481..1164
                     /locus_tag="EYO87_17800"
                     /inference="COORDINATES: protein
                     motif:HMM:PF00392.19,HMM:PF07729.10"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HIC67808.1"
                     /translation="MQSAEKPRDLARDSVYQELRSEILMCRLRPGQMLQERDLVARLG
                     ISKSPIRDALLKLEQRGLIEVLPRKGYRVRQIDISDVRDMYGLRLILERECISLMMDT
                     ASKDVLERLDDFAEAPSSPDLPTWIDYNRAFHTYIAAHCGNARLAMIAQEIIEQFDRL
                     TYVSVTSSDDLSLDKFEREHREIIGAIRAGDKRQAIALAGRHVQSSRKRVLDSLRSAS
                     IVDTSPVPG"
     gene            1200..1616
                     /locus_tag="EYO87_17805"
     CDS             1200..1616
                     /locus_tag="EYO87_17805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015929761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67809.1"
                     /translation="MSKNLLPDWPAELVEDMKVNEYSGVVGSVLVSETDDLRVWHLHL
                     PAGKRCNFHRHVLNYFWTCHAHGKARGYFEDGTIRDVVHFPGDTRHFEFPEGTHMLHS
                     VENVGDTDLLFTTVEFKKSANPPLPVPDSVRLTEAV"
     gene            1644..2780
                     /locus_tag="EYO87_17810"
     CDS             1644..2780
                     /locus_tag="EYO87_17810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008389864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase"
                     /protein_id="HIC67810.1"
                     /translation="MYAPPGVKTSPAVNVSETMKAWVLGEPGELRRIEKPTPVPGRAE
                     VLVRIDAVAICATDLDVISSGPPAMIQGGLPFNKNFTPGHEYMGTVAAQGPGVDEFAV
                     GDRVTVEIHAGCGQCKRCRMGMYTSCLNYGLNYGDVDKGHRANGFTTDGGFASYAVNN
                     INTLIKIGDTMSDEEATLVVTAGTSMYGLTELGGLVAGESVVVCGPGPIGLLGVAVAK
                     SLGAHPVILTGTRDNRLEVGRELGADHVVNVRQEDAVEAVRKITGGKGVDYVLECSGA
                     PGAIDTVGRMLNRGGKICLAAFPHEADKVDVAHLVRNNIYIYGIRGEGKSATHRAHAF
                     MADKRFDATRIHTHTFDMEDLPEALRYARERVEDAIKVVVKNRH"
     gene            3300..4394
                     /locus_tag="EYO87_17815"
     CDS             3300..4394
                     /locus_tag="EYO87_17815"
                     /inference="COORDINATES: protein motif:HMM:PF03401.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HIC67811.1"
                     /translation="MKNGFDRRAFLGGAGMATLSITLPGIAAAQSYPARPITVVIMYA
                     AGGGTDVLIRKLADEMAKARGWNVSIANRPGAVGGIATQYVSAQPADGYNILGAANYN
                     KFVRVLGHVPASPAPWEQWAFMKAGNAIASWSVPVDSPFQTLQDVIDAAREKPGRISV
                     STSGTGGIWHEMALLIAAFANIELRYVPYQGGQPATLAGLQGEVDIAGGGVHEHIELV
                     RAGQFRMLQQTGTEDIVLEDGTVLPTVANLIPDLAPFLPMGATYNMMVRRDTPPEILG
                     EIRNAFVEAANSQDFRDFLAARFFQHDVKVGEEADREAARMEVVTVDLFNRYADQIGS
                     DVLSADELGLPGPNGFKEWWPPQGYMPLDL"
     gene            4407..>4826
                     /locus_tag="EYO87_17820"
     CDS             4407..>4826
                     /locus_tag="EYO87_17820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67812.1"
                     /translation="MSQTNQSEFAGEEEGAGYAAPSVDMIAAVLLTLLAGWYSWEALG
                     FRAPGGWRTAPGLLPLAAGLSLMAMAVGLGLTAWRRRGRDGATGKARRDAGHGADMLR
                     TAMLIGVLFVYLLAMDSMTFGLRGYVAGVFLVVGAFEI"
BASE COUNT          919 a         1452 c         1533 g          922 t
ORIGIN      
        1 aggccaaccc cgggcatcag aacgtcggcc ggaacacctg cggccaccag tttttccagc
       61 agcgccatgc gttcggcgag actcagcgaa ttcgcttcgc tggtggtgcc gaacaccgcc
      121 agtccattcg cgccattggc cagcagccat ttgcagaact cgacgaatgc gtcgccatcc
      181 ggagaaaggt cggcccggaa gggcgtgatc gcaggaacga gaagcccggt gaaacgtttg
      241 ggttccatgg tctggtcctt tcggaattgc gctgattgtc cagggcgaca agcggatcga
      301 tcaggtcggg cgtgcagcct gtcaggtctt gtcctgcgga tatgcgagac gcctcgaggc
      361 tgtcaactga aatatcagtg ttgacactcg gccgtccctg atgccatttt ctgcaaaagc
      421 cgcgacgcgg tttgttcccg cgaatccggg ttctctggca gaagggacca tgatcagaac
      481 atgcagagcg ccgagaaacc ccgcgatctg gcgagggaca gcgtctatca agagcttcgg
      541 tccgagattt tgatgtgtcg gctgcggccg ggccagatgc tgcaggaacg cgaccttgtg
      601 gcgcgactgg ggatcagcaa atcgcccatc cgcgacgcat tgctgaagct ggagcagcgg
      661 ggcctgatcg aggttctgcc gcgcaagggc tatcgtgtac gccagatcga tatcagcgac
      721 gtccgcgaca tgtatggtct tcggctgatc ctcgaacgcg agtgcatttc gctgatgatg
      781 gacacggcca gcaaggatgt tcttgaacgt ctcgatgatt tcgccgaggc gccgtccagc
      841 cccgatctgc cgacctggat cgattacaac cgcgcctttc acacctatat cgcggcgcat
      901 tgcggcaacg cccggcttgc catgatcgcg caggaaatca tcgagcagtt cgaccggctg
      961 acctatgtca gcgtgacaag ctctgacgat ctgtcgctgg acaagttcga gcgcgagcat
     1021 cgcgagatca tcggcgccat ccgcgcgggt gacaagcggc aggccatcgc gctggcggga
     1081 cgccatgttc agagctcgcg caagagggtt ctcgacagtc tcagaagtgc ctcgatcgtc
     1141 gatacctcgc ccgtgccagg ctgacgcctg cgcaccatca acagcaagga gacgggacca
     1201 tgtcgaagaa cctcctgccg gattggccgg ccgaacttgt cgaagacatg aaggtcaacg
     1261 aatatagcgg cgtcgttggc agcgtcctgg tatcggaaac cgacgacctt cgcgtctggc
     1321 acctgcatct gcccgccggc aagcgttgca actttcaccg gcacgtcctc aattatttct
     1381 ggacctgcca cgcgcatggc aaggcgcgcg gctatttcga ggacggcacg atcagggatg
     1441 tcgtccattt ccccggcgac accaggcatt tcgagttccc cgagggaacc cacatgctgc
     1501 acagcgtcga gaacgtcggt gataccgacc tgcttttcac aaccgtcgaa ttcaagaaaa
     1561 gcgccaatcc gcccttgccg gtgcccgaca gcgtgcggct gacggaagcc gtctgacaga
     1621 cgaaatcgag agatagccgc cccatgtatg ccccccccgg agtcaagacc agcccggccg
     1681 tgaacgtgtc cgaaaccatg aaggcatggg ttctgggcga gcctggcgaa ctcagacgaa
     1741 tcgaaaagcc gacgcccgtg cctgggcggg ccgaggtcct ggtccgcatc gatgccgtgg
     1801 cgatctgcgc caccgatctt gacgtcatct cgtccggccc gcccgcgatg atccagggcg
     1861 gattgccctt caacaagaac ttcacgcccg gccatgaata catgggcacc gtcgccgcgc
     1921 agggaccggg cgtcgacgaa ttcgccgtcg gcgaccgcgt gactgtggaa atccacgccg
     1981 ggtgcgggca atgcaagcgt tgccggatgg gcatgtacac gtcatgcctg aattacggcc
     2041 tgaattacgg agatgtggac aagggccatc gcgcgaatgg cttcacgacg gatggcggtt
     2101 ttgcctccta cgcggtcaac aacatcaaca cgctgatcaa gatcggcgat acgatgtccg
     2161 acgaggaagc gacgctggtc gtcaccgcgg gcacgtcgat gtacggtctg accgaactgg
     2221 gcggcctggt cgccggtgaa agcgtcgtgg tctgtggacc cggtccgatc ggcctgctgg
     2281 gcgtcgcggt ggccaagtcg ctgggggcgc acccggtgat cctgaccggc acgcgcgaca
     2341 atcggcttga ggtggggcgc gaactgggcg ccgatcatgt ggtcaatgtt cgccaggaag
     2401 atgctgtcga ggcggtcagg aagatcaccg gaggcaaggg ggtcgattat gtgctggaat
     2461 gctcgggtgc accgggggcg atcgacacgg tcggcaggat gctcaaccgc ggcggcaaga
     2521 tctgcctcgc agcctttccc cacgaagccg acaaggtcga tgtggcgcat ctggtgcgca
     2581 acaacatcta catctacggc atccgtggcg aaggtaaatc cgccacccac cgtgcccatg
     2641 ctttcatggc cgacaagcga tttgacgcca ccaggatcca tacccacacc ttcgacatgg
     2701 aggatctgcc cgaggccttg cgctatgcac gcgaacgtgt cgaggacgcc atcaaggtcg
     2761 tcgtcaagaa ccgccactga ccgaccggcc gtcgtcgtcg cgaatggatc aagggaaatc
     2821 aattcctgag gaatgggttt ccgcatttat ggccaatatg cgcatttcat gcgtctcatt
     2881 ttccatgact gaatatttat atttgagttg gatgattttg cgagggtcga cgcgtcttcg
     2941 tggataccag gggtcgccgc ctccgattgc gggataagcc ggcggaacgc tggcctaaaa
     3001 tcatgtttta aagcaataat ccgatgctcc ggggccgaca cggtgcccgc aaggctggcg
     3061 cctgaccctt gaactctttt cggaatccgg tggctgatgg tttctcttcg gcgtttcccg
     3121 agccgtgacc tgtcatcagg aaaacatatg ccagcccatc actattctaa tgcgtaaatt
     3181 attgacgcgc ggctcttcgt tctgccaggc tttttctacc gcctgaatat gctgtttccg
     3241 gttcttttgc gatacggaac tgcgcaagag acgcggcggt cacataggga ggaggtcaca
     3301 tgaagaacgg attcgatcgc cgcgcgttcc tggggggcgc cgggatggcg acgctcagca
     3361 tcaccttgcc gggcattgcc gcggcgcaaa gctatccggc ccgcccgatt accgtggtga
     3421 tcatgtatgc cgctggcggt ggcaccgatg tcctgatccg caagctggcg gacgaaatgg
     3481 ccaaggcgcg cggatggaac gtcagcatcg cgaaccggcc cggtgccgtc ggcggcattg
     3541 cgacgcaata tgtcagcgcg cagcctgcgg acggctacaa catccttggc gcggcgaact
     3601 acaacaagtt cgtgcgcgtg ctggggcatg tcccggcctc gcccgcgccg tgggagcaat
     3661 gggccttcat gaaggccggc aatgccattg ccagctggtc cgtgcccgtc gattcgccct
     3721 tccagacctt gcaggacgtc atcgacgcgg cgcgggagaa gccgggacgg atcagcgtgt
     3781 ccacctcggg gaccggcggg atctggcacg agatggcgct tctgatcgcc gcgttcgcca
     3841 atatcgagtt gcgctatgtg ccctatcagg gcggacaacc ggccacgctt gccggtctgc
     3901 agggcgaagt cgacattgcc ggcggcgggg tccacgagca tatcgaactg gtgcgtgcgg
     3961 ggcagttccg catgttgcag caaaccggga cggaagacat cgtgctggaa gacggtaccg
     4021 tgttgccgac ggttgccaac ctgatccctg acctggcccc cttcctgccg atgggcgcca
     4081 cctacaacat gatggtgcgc cgcgacacgc cgcccgagat cctgggcgag atccggaatg
     4141 ccttcgtcga ggccgccaat tcgcaggact tccgcgattt cctcgccgcg cgtttcttcc
     4201 agcatgatgt caaggtgggg gaggaggccg atcgcgaagc ggcgcgcatg gaggtcgtga
     4261 cggtcgacct gttcaaccgg tatgccgacc agatcggttc cgacgtgctt tcggctgacg
     4321 aactcggcct gcccggaccg aatgggttca aggaatggtg gccgccgcaa ggctacatgc
     4381 cgctcgacct gtgaggggcg tcgatcatga gccagaccaa ccagagcgaa tttgccggag
     4441 aagaagaggg ggctggctat gccgccccct cggtggacat gatcgccgcc gttcttctga
     4501 cccttcttgc cggctggtac agctgggaag cactgggctt tcgtgcaccc ggcggctggc
     4561 gcacggcgcc cggacttctg cctttggccg cgggcctcag cttgatggcc atggcggtgg
     4621 gtctgggcct gacggcatgg cgccgacggg gacgtgacgg tgcgaccggc aaagcccgtc
     4681 gcgatgccgg gcacggcgcc gacatgttgc ggaccgcgat gctgatcggc gtgctgttcg
     4741 tctacctgct ggcgatggat tccatgacct ttggtctgcg tggctatgtt gccggcgtct
     4801 ttctggtcgt cggggcgttc gaaatc
//
LOCUS       DTVW01001343            3212 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_923509, whole
            genome shotgun sequence.
ACCESSION   DTVW01001343 DTVW01000000
VERSION     DTVW01001343.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3212)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3212)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3212
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_923509"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1235)
                     /locus_tag="EYO87_17825"
     CDS             complement(<1..1235)
                     /locus_tag="EYO87_17825"
                     /inference="COORDINATES: protein motif:HMM:PF13231.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67813.1"
                     /translation="MAEAAPAHPARAMPRGALAVLAAGMALRLIWALLIPVDPVSDSA
                     AYETFAWTLVNDGVYGWSADQPSAYWAVGTSAIAAATFLLLGQSYAGIVALNLLAALV
                     AMIATWRLGQIYYGGRAAFAALAVMAFWPNLIFFTSILSSELYFIALVVTGWYFWARP
                     AGRPWVNLVLAGLIWGLACYVRPVILLLPAAFAIAALSRGMAATLRSTIRAALVIALI
                     VLSVSPWTLRNAREIGKPFLVSSNFNANLWMGNNPDSQGGYTPLPAEVSGMDEARRDA
                     YLGAQAREYIRSDPLRFAADVGRRVLLLHSRETIGVAWNRQAIETRFGAKAVPAAKLV
                     ATGYWYLVLAAALAGVALSVRQAGLAGLFHPVFGGWAYFTAVHAIIVAEDRYHMPATP
                     FMTLLMDVLAGIGFAFLLTG"
     gene            complement(1228..2697)
                     /locus_tag="EYO87_17830"
     CDS             complement(1228..2697)
                     /locus_tag="EYO87_17830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008554052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UbiA family prenyltransferase"
                     /protein_id="HIC67814.1"
                     /translation="MIADPRPADADDDAEAVLVVDLDGTLCRTDTLHETLLRLAAADP
                     RAMPGMALGLRGGKVRFKNAIADRMVIDPATLGYDPAVIEALERARAAGRRTALVSAS
                     DRRVAEAVAAHLGLFDEVHGTDPDGRGPNLSGHAKADFLVRRFGDRGFDYIGDCRADL
                     PVWQKARTALAVRPDAALIRAGQAGGISLQPVGQADPALRRRAMIRALRPHQWSKNIL
                     VFLPMLAAQDFSALPLVLLAFVLFCLIASSVYIINDLLDLPADRIHPRKSRRPFASGA
                     VPAATGMAMAAIMLGISLLPGLIVMPGAFMGVMAGYFLLTLAYSLSLKRKLIVDVVTL
                     AILYTLRIIAGAAAAGISPSPWLLAFSVFLFFGLAAIKRQAELIDQIARDRPDSPGRA
                     YLSGDVTVMQIMAISSGQAAVMVFALYLDSQTATALYARPQILWLICPILLYWLSRIA
                     ILTHRGHMEDDPIVFAARDRVSQITGLVVLILLLAAARG"
BASE COUNT          597 a         1076 c         1099 g          440 t
ORIGIN      
        1 ccggtcagta aaaaggcaaa accgatgccg gccaggacat ccatcagcag cgtcatgaag
       61 ggggtggcgg gcatgtgata gcggtcctcg gccacgatga tggcgtgcac ggcggtgaaa
      121 taggcccagc cgccgaagac cgggtggaac aggccggcca ggccggcctg cctgaccgac
      181 agggccacgc cggccagcgc ggcggcgaga accagatacc agtagccggt cgcgaccagc
      241 ttggcggccg ggacggcctt cgcgccgaac cgcgtctcga tcgcctgccg gttccaggcg
      301 acgccgatgg tttcgcggct gtgcagcaac aggacgcgcc gccccacatc ggcggcaaag
      361 cgcagcggat cggaccggat gtattcgcgc gcctgcgcgc ccagataggc gtcgcgccgg
      421 gcctcgtcca tgccggagac ctcggcgggc aggggggtat agccgccctg gctgtcggga
      481 ttgttgccca tccacagatt ggcgttgaaa ttcgacgaga cgaggaaggg cttgccgatc
      541 tcacgggcgt tgcgcagcgt ccagggcgag acgctcagca cgatcagcgc gatgaccagc
      601 gccgccctga ttgtgctgcg cagggtcgcg gccatgcccc gcgacagcgc ggcgatggcg
      661 aaggcggccg gcagcagcag gatcaccggc cggacatagc aggccagccc ccagatcagc
      721 ccggccagga ccaggttcac ccagggccgc cccgcgggcc gggcccagaa ataccagccc
      781 gtcacgacca gggcgatgaa atacaattcg ctggacagga tcgaggtgaa gaagatcagg
      841 ttcggccaga aggccatgac cgccagcgcc gcgaaggccg cccgtccgcc gtaatagatc
      901 tgccccagcc gccatgtcgc gatcatcgcg accagggccg ccagaaggtt cagcgcgacg
      961 atgcccgcat agctctggcc cagcagcagg aaggtcgcgg cggcgatggc cgatgtgccg
     1021 acggcccaat aggccgaggg ctggtccgcg ctccagccat agacgccgtc attgaccagg
     1081 gtccaggcga aggtctcgta ggcggcgctg tcggagaccg gatcgaccgg gatcagcagc
     1141 gcccagatca gccgcagcgc catgccggcc gcaaggacgg ccagggcgcc gcgcggcatg
     1201 gcgcgcgcgg gatgggccgg ggcggcctca gccacgggcg gccgccagca gcaggatcag
     1261 caccaccagc ccggtgatct ggctgacccg gtcgcgcgcg gcgaagacga tgggatcatc
     1321 ctccatatgg ccgcgatggg tcaggatggc gatgcggctg agccagtaca gcaggatcgg
     1381 gcagatcagc cacaggatct ggggccgggc ataaagcgcg gtcgccgtct ggctgtccag
     1441 atacagcgcg aagaccatca ccgccgcctg cccggaactg atggccatga tctgcatgac
     1501 ggtcacgtcg ccggacagat aggcccggcc gggactgtcg ggcctgtccc gcgcgatctg
     1561 gtcgatcagc tcggcctggc gcttgatcgc ggccagcccg aagaacagga agaccgagaa
     1621 ggccagaagc cagggcgagg gggaaatccc cgccgccgcc gccccggcga tgatgcgcag
     1681 cgtatagagg atggccagcg tgaccacatc gacgatcagc ttgcgcttga gcgacagcga
     1741 ataggccagc gtcagcagga aatagcccgc catgaccccc atgaaggcgc cgggcatgac
     1801 gatcagcccc ggaagcaggc tgatccccag catgatcgcg gccatggcca tgcccgtcgc
     1861 cgccggcacc gcgcccgagg cgaaggggcg gcgggatttg cgcggatgga tgcgatcggc
     1921 aggcaggtcc agcagatcgt tgatgatata gaccgacgag gcgatcaggc agaacagcac
     1981 gaaggccagc agcaccagcg gcagcgcgga aaaatcctgc gcggccagca tcggcaggaa
     2041 gacgaggatg ttcttggacc attgatgcgg ccgcagggcc cggatcatcg cgcgccggcg
     2101 cagggccgga tcggcctgtc cgaccggttg caggctgatg ccgcccgcct ggccggcccg
     2161 gatcagcgcc gcatcgggac gcacggccag tgccgtcctg gccttttgcc agaccggcag
     2221 atccgcgcgg caatcgccga tatagtcaaa gccccggtcg ccgaaacgcc gcaccagaaa
     2281 atcggccttc gcatgccccg acaggttcgg cccgcggccg tcgggatcgg tgccgtggac
     2341 ctcgtcgaac aggcccagat gcgcggccac cgcctcggcg acgcgccggt ccgaggccga
     2401 gaccagcgcc gtgcgccgcc ctgccgcgcg ggcccgttcc agcgcctcga tcaccgccgg
     2461 atcatagccc agcgtggccg gatcgatgac catgcggtcg gcgatcgcgt tcttgaagcg
     2521 gaccttgccg ccgcgcagcc ccagggccat tcccggcatg gcccgcggat cggcggccgc
     2581 cagcctcagc agcgtctcgt gcagcgtgtc ggtgcggcac agcgttccat ccagatccac
     2641 gacgagaacg gcttcggcat catcatccgc atccgcgggt cgggggtctg caatcatcac
     2701 ggcgggatcc atgctgggcg tcctgtcggt cataggtcaa atacttgcat gaggaaagaa
     2761 cgcggcgatg cggatattcc gtcccgggcc gcctggggga tggtcagatc gggatcggcc
     2821 gccagcccgg cgcgggcatc ggcgatggcc tgccggacct cgtttccttg aaaatcggcg
     2881 aatgccgcga tgtcttcgga ttgcccggtc gtgtcaggag cattcggtga cacgggatca
     2941 gctagctcgt gagaagaccg cagctgtcgg gcatttccat cacgcttgcg atggagctgc
     3001 gtcacgcctt tggccctgat cttgcgtctg aaaaccggcg ctttgaaatc cgctcaccga
     3061 tctcagggaa acccacgaca gcaacgaccg cctcgtccgg tccatagaag ccctgatgac
     3121 aaccgtggtg acgatccaac ttctgaccgg tccttgggaa cctccatcct ttcgacccgt
     3181 cccccgccgc tctccggcat gtgtgaggtg cc
//
LOCUS       DTVW01001344            2804 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_936683, whole
            genome shotgun sequence.
ACCESSION   DTVW01001344 DTVW01000000
VERSION     DTVW01001344.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2804)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2804)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2804
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_936683"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..210)
                     /locus_tag="EYO87_17835"
     CDS             complement(<1..210)
                     /locus_tag="EYO87_17835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010395798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-[acyl-carrier-protein]--UDP-N-
                     acetylglucosamine O-acyltransferase"
                     /protein_id="HIC67815.1"
                     /translation="MAETAIHPTAVIEPGAEIGTGVRIGPFCVVGSQVRLADRVELRS
                     HVVVTGDTAIGDETVIFPFASIGEVP"
     gene            complement(203..682)
                     /gene="fabZ"
                     /locus_tag="EYO87_17840"
     CDS             complement(203..682)
                     /gene="fabZ"
                     /locus_tag="EYO87_17840"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013067358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-ACP dehydratase FabZ"
                     /protein_id="HIC67816.1"
                     /translation="MAAAPRNPAPHTEADLSLIKRIIPHRYPFLFIDKVRDIVAFESA
                     IGVKNVTCNEPHFQGHFPSQPIMPGVTIVEAMAQTSAVVVGISLDVIDKPLLTYFMGI
                     DNCKFRRMVVPGDVLELHCTVTRAGGRIWKFHGEARVDGQLAAEADFTAMMDLKADG"
     gene            complement(745..>2804)
                     /locus_tag="EYO87_17845"
     CDS             complement(745..>2804)
                     /locus_tag="EYO87_17845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011750138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67817.1"
                     /translation="ALWRGLRGWAWRGLAGLAAALALAGPALEIGSRAGLSDIVVLLD
                     DRSASQSLPERGDQTDAAVTELTRRIEALPNTELRRVTVGDSEDGTLLATEMARAVAA
                     EPASRLAGVIAVTDGRIHDAPMLPQSVPAPVHVLRTGRPQDWDRRLVIEEAPAFGLID
                     QQVTIRLRIEDQGAVPDSVAGGSANLRISVDGEDEQTFAVPVGQSLELPLTLTHAGQN
                     VVQIGFDAPDPGGAGPELTDRNNSAAISINGVRDRLRVLLVSGEPHAGERTWRNLLKS
                     DAAVDLIHFTILRPPDKSDGVPVDELSLIAFPTRELFLQRIDDFDLIIFDRYRVRGIL
                     PPSYFDNIARYVENGGAVLVAAGPEMASVESLNLSPMGRILPARPTGRIINQAFRPQL
                     TEAGRRHPVTSGLPDAPDENGAGGWGRWLRMAEVTPDPDAQVAMTGPDGAPLLILNRV
                     GKGRVALLSSDQVWLWSRGFEGGGPQLELLRRIAHWSMKEPELEEEALLADVSGGLDV
                     RFTRRTMQDKAGPLIVTRPDGQTEEVPLTQAGPGRFSADWTAPEPGLYRLQDGDLRRV
                     LALGPAAPREFEQTVASTDQLAPLVEASGGGVVALSDGVPDLRTVAPGRTAHGRGVAR
                     DWIAITPRDAATVTGLERRPLLPGWAWLALIAGLILPGWLAEGRRTGKAAPVTGNPAA
                     GQG"
BASE COUNT          433 a          986 c          962 g          423 t
ORIGIN      
        1 cggcacctcg ccgatcgagg cgaagggaaa gatcaccgtt tcgtcgccga tcgcggtgtc
       61 accggtcacg acgacatggg accgcagttc cacccggtcg gccagccgca cctgggagcc
      121 cacgacgcag aaggggccga tcctgacccc ggtgccgatc tctgccccgg gctcgatcac
      181 ggccgtgggg tggatcgctg tctcagccat cggccttcag gtccatcatg gcggtgaaat
      241 cggcctcggc cgccagctgg ccatcgaccc tggcctcgcc gtggaatttc cagatccggc
      301 cgccggcgcg ggtgacggtg caatgcagtt ccagcacgtc gcccggcacc accatgcggc
      361 ggaacttgca attgtcgatc cccatgaaat aggtcagcag cggcttgtcg atgacgtcga
      421 ggctgatgcc aaccaccacg gccgaggtct gcgccatcgc ctcgacgatg gtgacgccgg
      481 gcatgatcgg ctggctggga aaatggccct ggaaatgcgg ctcgttgcag gtcacgttct
      541 tgacgccgat tgcgctttcg aaggccacga tgtcgcgcac cttgtcgatg aacaggaacg
      601 gatagcggtg cgggatgatc cgcttgatca gcgaaagatc ggcctcggta tggggggctg
      661 ggttgcgcgg ggcggcggcc atgctggtct tcctccggag gatttgtgac cggttagcaa
      721 cgccgcccgg ccttggcaag cgcgtcagcc ctggccggcg gccggattgc ccgttacagg
      781 cgccgccttg ccggtcctgc ggccctcggc cagccagccc ggcaagatga gccccgcgat
      841 cagcgccagc cacgcccagc cgggcagcaa gggccgccgt tcgaggccgg tgaccgtcgc
      901 cgcatcgcgc ggggtgatgg caatccagtc acgggccacg ccccggccat gggccgtccg
      961 gcccggcgcg accgttctga gatcgggcac gccgtcggac agcgcgacga cgccgccgcc
     1021 cgaggcctcg accagcggcg ccagctggtc ggtgctggca acggtctgtt cgaattcgcg
     1081 cggcgcggcg gggccaagtg ccagcacccg gcgcagatca ccgtcctgca gacggtagag
     1141 ccccggctcg ggcgcggtcc agtcggcgct gaagcggccc ggcccggcct gggtcaacgg
     1201 aacctcttcg gtctggccat ccggccgggt gacgatcagc gggccggcct tgtcctgcat
     1261 cgtgcggcgg gtgaagcgca cgtccagacc gcccgaaaca tcggccagca gcgcctcttc
     1321 ctccagctcc ggttccttca tcgaccaatg cgcgatgcgg cgcagcaatt ccagctgcgg
     1381 cccgccgccc tcgaaaccgc ggctccagag ccagacctga tccgaactca gcagcgccac
     1441 ccgccccttg ccgacccggt tcaggatcag aagcggtgcg ccatccggac cggtcatcgc
     1501 gacctgagcg tcggggtcgg gcgtcacctc ggccatgcgc agccagcggc cccagccgcc
     1561 cgcgccgttc tcgtcgggcg catcgggcag acccgatgtg accgggtggc ggcgcccggc
     1621 ctcggtcagt tgcgggcgga acgcctgatt gatgatccgg ccggtggggc gggcgggcag
     1681 gatccggccc atcggcgaca ggttcaggct ttcgacgctg gccatttccg gccccgccgc
     1741 aaccagcacc gcgccgccat tttcgacata gcgggcgata ttgtcgaaat aggagggcgg
     1801 caggatgccc cgcacccggt agcggtcgaa gatgatcagg tcgaaatcgt cgatccgctg
     1861 caggaacaat tcgcgcgtcg gaaaggcgat cagggacagt tcgtcgaccg gcacgccgtc
     1921 cgacttgtcg ggagggcgca ggatggtgaa atggatcaga tcgaccgccg cgtccgattt
     1981 cagcagattg cgccaggtcc gttccccggc atggggctcg cccgagacca gcaacacccg
     2041 cagccggtcg cgcacgccgt tgatgctgat cgcggcgctg ttgttgcggt cggtcagttc
     2101 cggccccgcg ccgccggggt cgggcgcgtc aaagccgatc tggaccacgt tctggccggc
     2161 atgggtcagg gtcagcggca gttccagcga ttgtcccacg ggcacggcga aggtctgttc
     2221 atcctcgcca tcgacgctga tgcgcagatt ggcagaacct ccggcgacgc tatcggggac
     2281 cgcgccctga tcctcgatcc tcaggcggat cgtgacctgc tggtcgatga gaccgaaggc
     2341 cggcgcctct tcgatcacca gcctgcgatc ccagtcctgc ggccgcccgg tccgcaggac
     2401 atgaaccggg gcgggcacgg attgcggcag catcggcgca tcgtggatcc ggccgtcggt
     2461 cacggcgatg acaccggcca ggcggcttgc cggctcggcc gcgacggcgc gggccatctc
     2521 ggtcgcaagc agggtgccgt cctcgctgtc gccgacggtg acgcggcgca actcggtatt
     2581 gggcagcgcc tcgatccggc gcgtcagctc ggttaccgcg gcatcggtct gatcgccgcg
     2641 ttccggcagg ctctggctgg ccgaacggtc gtccagcagc accacgatat ccgacaggcc
     2701 cgcacggctg ccgatctcca gcgccggccc cgccagcgcc agcgcggcgg ccagaccggc
     2761 caatccgcgc caggcccagc cgcgcaggcc gcgccacagc gcga
//
LOCUS       DTVW01001345            1395 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_940780, whole
            genome shotgun sequence.
ACCESSION   DTVW01001345 DTVW01000000
VERSION     DTVW01001345.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1395)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1395)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1395
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_940780"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..592)
                     /locus_tag="EYO87_17850"
     CDS             complement(<1..592)
                     /locus_tag="EYO87_17850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HIC67818.1"
                     /translation="MKMLIFGHGYSAGFLTPALIARGWQVSGTTRADPDRVAAAGAAP
                     LIWPGQRDAVRAAIDGADAVLVSVAPGSGGDPVLAAFGADLARARPGWLGYLSTTGVY
                     GDRQGGWVDEDSATDASGPRGLARIEAEAGWRELAEGAGLALHIFRLAGIYGPGRGPF
                     EKVRNGTARRIVKPGQVFSRIHVADIVQVLLASIEAP"
     gene            689..>1395
                     /locus_tag="EYO87_17855"
     CDS             689..>1395
                     /locus_tag="EYO87_17855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011746751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP nucleosidase"
                     /protein_id="HIC67819.1"
                     /translation="MDTDSRYLPVESPDSPAREQFTDARAAVARLQRLYTESTDFLLD
                     HFTRLLEGGRPAARYRAFYPELRLTVTSHPHVDSRLSFGHVVAPGSYAATITRPDLFQ
                     NYLTEQIALLIKNLGVPVTVGLSETPMPVHFAVAAQSELAVPQEGVLDFSLRDIFDVP
                     DLNTMNDDIVNGVAGPLPDGTHHLAAFTAQRIDYSLARLQHYTATKAEHFQNFVLFTN
                     YQFYVDEFEAFARMALA"
BASE COUNT          234 a          533 c          421 g          207 t
ORIGIN      
        1 gcggggcctc gatcgaggcc agaagaacct gaacgatatc agccacatga atgcgcgaaa
       61 agacctgccc cggcttcacg atccgccgcg ccgtgccgtt gcggaccttc tcgaacgggc
      121 cgcgccccgg cccgtagatt ccggccagcc ggaagatgtg cagcgccagc ccggcgccct
      181 ccgccagttc gcgccacccg gcctcggcct cgatccgcgc cagaccgcgc gggccgctgg
      241 cgtcggtcgc gctgtcctcg tccacccagc cgccctgccg gtcgccatag accccggtcg
      301 tggacagata gcccagccag cccggccgcg cgcgcgccag atccgcgccg aaggcggcca
      361 gaaccgggtc ccccccggat cccggcgcga ccgaaaccag aaccgcgtcg gccccgtcaa
      421 tcgccgcgcg aaccgcatcc cgctgccccg gccagatcag cggcgcggcc cccgcggcgg
      481 ccacccggtc gggatccgcg cgtgtcgtgc cgctgacctg ccagccgcgc gcgatcaagg
      541 cgggcgtcag gaagcccgca ctgtatccat gaccgaaaat cagcatcttc atgggcgcag
      601 gctaacgcgc ccgcggcggt gccgccagac gcttgcctga cccgcgccgg gctggcagga
      661 tccgcgcaac aagaaggata agaagaccat ggacacggat tcccgctatc tgcccgtcga
      721 aagccccgat tcccccgcgc gcgagcagtt caccgatgcc cgcgccgccg tcgcgcggct
      781 gcagcggctg tataccgagt cgacggattt cctgctggac catttcaccc gcctgctgga
      841 gggcggacgc cccgccgcgc gttatcgcgc cttctacccg gaactgcgtc tgaccgtcac
      901 cagccatccg catgtggatt cacggctttc ctttggccat gtcgtcgcgc cgggcagcta
      961 tgccgccacc atcacccggc ccgatctgtt ccagaactac ctgaccgagc agatcgcgct
     1021 gctgatcaag aatctcggcg ttccggtgac ggtgggcctc agcgagacgc cgatgccggt
     1081 tcacttcgcg gtcgcggccc aaagcgaact ggccgtgccg caggaaggcg tgctggattt
     1141 ctcgctgcgc gacatcttcg acgtgccgga tctgaacacc atgaacgacg acatcgtgaa
     1201 cggggtcgcc ggccccctgc cggacggaac ccatcacctg gccgccttca ccgcgcagcg
     1261 gatcgactat tcgctggcgc gcctgcagca ttacaccgcc accaaggccg aacatttcca
     1321 gaatttcgtc ctgttcacca actaccagtt ctacgtggac gaattcgagg ccttcgcgcg
     1381 catggcgctg gccga
//
LOCUS       DTVW01001346            1556 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_940800, whole
            genome shotgun sequence.
ACCESSION   DTVW01001346 DTVW01000000
VERSION     DTVW01001346.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1556)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1556)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1556
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_940800"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            1..526
                     /locus_tag="EYO87_17860"
                     /pseudo
     CDS             1..526
                     /locus_tag="EYO87_17860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352636.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="PQQ-dependent dehydrogenase, methanol/ethanol
                     family"
     gene            705..1493
                     /locus_tag="EYO87_17865"
     CDS             705..1493
                     /locus_tag="EYO87_17865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011746371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome, methanol metabolism-related"
                     /protein_id="HIC67820.1"
                     /translation="MKVITSLGALILGVSLAGAAIAQTAATDATTPPPAQAGAGAAAA
                     TSGNATATTTGTGTGAVDPAQAGAGAAAATSGNAQAAAPAAQDGKDAATGNGGTVSDK
                     PVDLAKGATTLPNGMDITPDYEENGRWFNADGIPTFKIAEDGTVDFATFNGYRRYTSN
                     CMVCHGPDGEGSTYAPALKNSVLRLDYYQFQQIVASGKKQVNTAQNQVMPAFGTNKNV
                     WCYVDDIWAYLVARGTDELPRGRPAKKGPKSEAFTAQEDSCMSM"
BASE COUNT          296 a          500 c          521 g          239 t
ORIGIN      
        1 cgagaccggc ctgttctacg tgccgaccaa ccacgtctgc atggattacg aaccgttccg
       61 cgttgcctat accgccggtc agccctatgt cggcgccacg ctgtcgatgt atccggcgcc
      121 caacagccat ggcggcatgg gcaacttcat cgcctgggac aacgtcaagg gcgagatcaa
      181 gtggtccctg cccgagcagt tctcggtctg gtccggcgct ctggccacca agggcggggt
      241 cgtgttctac ggcacgctgg agggctatct gaaggcggtg gatgccgaaa cgggcgacga
      301 attgttcaag ttcaagaccc cgtccggcat catcggcaac gtgatgacct acgaaagcaa
      361 cggcaagcaa tatatcggcg tgctgtcggg cgtcggcggc tgggccggca tcgggcttgc
      421 ggccggtctg accaacccca atgacggtct gggcgccgtg ggcggctatg ccgcgctcag
      481 cgactatacc gaactgggcg gccagctgac ggtgttcgaa ctgcccggcg acgtggcctc
      541 gaacgccccg gcggccgagc cgaagccggc tgcgggcgag acgaagggct aatactttcg
      601 ttccgcacgg acgaggttga tctgtgaaag ggccgcccca gcgatagact ggggcggttc
      661 tgtctgggga gagcaggcaa atgagaattg ggaggacgac gatcatgaaa gtcatcacca
      721 gcttgggggc gctgatcctg ggcgtatcgc tggccggcgc ggccatcgcg cagaccgcag
      781 cgacggacgc caccacaccg cccccggcgc aggccggcgc gggcgcggca gccgccacgt
      841 cgggaaatgc caccgccacg accaccggca ccggcaccgg agccgtcgat ccggcgcagg
      901 ccggggcggg ggctgccgcc gcaacgtcgg gcaatgcaca ggccgcagct ccggccgcgc
      961 aggatggcaa ggacgcggca accggtaacg gcggcacggt cagcgacaag ccggtggatc
     1021 tggccaaggg cgcgacgacc ctgccgaacg gcatggacat cacccccgat tacgaagaaa
     1081 acggccgctg gttcaacgcc gacgggatcc cgacattcaa gatcgccgag gacggcacgg
     1141 tcgatttcgc gaccttcaac ggctatcgcc gctatacgtc caattgcatg gtctgccacg
     1201 gcccggacgg cgagggttcg acctatgcgc cggccctgaa gaattcggtc ctgcggctgg
     1261 actattatca gttccagcag atcgtcgcct ctggcaagaa gcaggtcaac accgcgcaga
     1321 atcaggtcat gccggctttc ggcaccaaca agaacgtctg gtgctatgtc gatgacatct
     1381 gggcctatct ggtggcgcgc ggcaccgacg aattgccgcg gggacgcccg gcgaagaagg
     1441 gaccgaaatc ggaggcattc accgcgcagg aagattcctg catgtcgatg tgatccgatg
     1501 atccgcttcc cctggcccaa gccggcgctg atcctggccc tgtgcggcgc gctgcc
//
LOCUS       DTVW01001347            1274 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_941424, whole
            genome shotgun sequence.
ACCESSION   DTVW01001347 DTVW01000000
VERSION     DTVW01001347.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1274)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1274)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1274
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_941424"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(41..>1274)
                     /locus_tag="EYO87_17870"
     CDS             complement(41..>1274)
                     /locus_tag="EYO87_17870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013962907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="OpgC domain-containing protein"
                     /protein_id="HIC67821.1"
                     /translation="RSQALALSGTPARARDPRLDFFRGLGMYIILIAHIPGNPWTLWI
                     PARFGFSDATEIFVFSSGMASAIAFGAVFARAGMALGALRVAHRVWQVYWAHTGVFVV
                     TLFCMVALNMTGWFERDYVGALNLYPFLNDPGPNLVGLLTLTYVPNYFDILPMYLVIL
                     ALIPVIIGLARIHVALAMAASVALWMAGSLKGVGLPAELWFQPPSDRQWFFDPFAWQL
                     VFFTGFAFMSGWLPAPPVRGWLIALAIVVIVATVPFAWFRIIGVSDFVREWRDEWKIL
                     IDKTHFGLLRYVHFLALAYLAWIAAGPGGARLSGGRFRNGIVGVVRKVGQQSLAVFMS
                     SMVLARLLGVMLDLLGRNLASVALVNLLGAAIITAIAYFVGYLKRQPWRQPAGKTAPA
                     RVQAGGHGAGAAIAAARP"
BASE COUNT          287 a          444 c          390 g          153 t
ORIGIN      
        1 agcatcacca gcgaaatcag cagcccgatc tgccgccgga tcatggccgc gccgccgcga
       61 tagcggcgcc ggcgccatgc ccgccggcct gaaccctggc cggcgcggtc ttccccgccg
      121 gctgccgcca gggctgccgc ttcagatagc cgacgaaata ggcgatggcg gtgatgatcg
      181 cggcccccag caggttgacc agcgccacgc tggccaggtt ccggcccaga agatccagca
      241 tcacccccag cagccgcgcc agcaccatcg acgacatgaa caccgccagc gattgctgcc
      301 cgaccttgcg cacgacgccg acgatcccgt ttcggaaccg cccgccagac agccttgcgc
      361 cgcccggccc ggccgcgatc caggccagat aggccagcgc caggaaatgg acatagcgca
      421 gcagcccgaa atgtgtcttg tcgatcagga ttttccactc gtcgcgccac tcgcgcacga
      481 aatccgagac gccgatgatc cggaaccagg caaagggaac cgtcgccacg atcacaacga
      541 tggccagcgc gatcagccag cccctgacag gcggcgcggg cagccagccc gacatgaagg
      601 caaagccggt aaagaacacg agctgccagg cgaaggggtc aaagaaccat tgccggtcgc
      661 tggggggctg gaaccacaat tccgccggca gtccgacccc cttgagcgaa cccgccatcc
      721 acagcgccac cgaggccgcc attgccagcg cgacgtgaat ccgcgccagc ccgatgatca
      781 cggggatcag cgccagaatg accagataca tcggcaggat gtcgaagtaa ttgggcacat
      841 aggtcagcgt cagcaacccg accagattcg gccccggatc gttcaggaac ggataaaggt
      901 tcagcgcgcc gacgtaatcc ctttcgaacc agccggtcat gttcagcgcc accatgcaga
      961 acagcgtgac cacgaaaacc ccggtatggg cccaatagac ctgccagacc cggtgtgcga
     1021 cacgcaatgc gcccagtgcc atcccggccc gggcgaaaac cgcgccgaag gcgatggccg
     1081 aggccatgcc cgacgagaag acaaagatct cggtcgcgtc cgaaaagccg aaacgggcgg
     1141 gaatccacag ggtccaggga ttgccgggga tatgggcgat caggatgata tacatcccga
     1201 ggccgcgaaa gaaatccagc cgtggatcgc gcgccctggc cggcgtgccg gacagggcca
     1261 gcgcctgcga acgg
//
LOCUS       DTVW01001348            1185 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_943106, whole
            genome shotgun sequence.
ACCESSION   DTVW01001348 DTVW01000000
VERSION     DTVW01001348.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1185)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1185)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1185
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_943106"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>1185
                     /locus_tag="EYO87_17875"
     CDS             <1..>1185
                     /locus_tag="EYO87_17875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005796547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HIC67822.1"
                     /translation="ARDFQRDSLRIAAMGEARQHGDIACRALSVAVRDRENAIFNLLR
                     FYEARTAIVFCKTRANVNHLLARMGNRGFRVVALSGELSQQERTHALQALRDGRARVC
                     IATDVAARGIDLPGLELVIHADLPTNSETLLHRSGRTGRAGAKGVSALVVSPSEYRKA
                     QRLLQGAKVTAEWGKAPSAEEVGHRDDQRMMDHPALTAPLDDMGVAQDLLARVGPERI
                     AAAFVQLWREGRPPPEVLSDVPQPAQAAPRAPRDFGAAVWFALSVGHSGRAEARWLLP
                     KICESGGITRDAIGAIRVREHETHVQIAIAEAPRFGETTEIEPGLTMRRLQGEPGPER
                     AAVKSPGSARPARAPQPEGTPGSRPAAPVRAAAKPAPAGKRAEADAPAKARAKPRWSA
                     AD"
BASE COUNT          180 a          427 c          421 g          157 t
ORIGIN      
        1 tggcccgcga tttccagcgt gacagcctgc gcatcgccgc gatgggcgag gcgcgccagc
       61 acggcgacat cgcctgtcgc gcgctgtcgg tcgccgttcg cgaccgcgag aacgcgatct
      121 tcaacctgct gcgcttctac gaggcgcgga ccgccatcgt cttctgcaag acgcgggcca
      181 atgtgaacca cctgctggcg cggatgggca atcgcggctt tcgcgtggtg gcgctgtcgg
      241 gcgaattgtc ccagcaggaa cgcacccacg ccctgcaagc tttgcgcgac ggtcgggcac
      301 gggtctgcat cgccacggat gtcgccgcgc gcggcatcga cctgccgggg ctggaactgg
      361 tcatccatgc cgatctgccc accaattccg aaacgctgct gcaccgctcg gggcgaaccg
      421 ggcgtgccgg ggccaagggg gtttcggcgc ttgtcgtcag cccgtcggaa taccgaaagg
      481 cgcagcggct gttgcagggc gcgaaagtca ccgccgaatg gggcaaggca ccttcggccg
      541 aagaggtcgg ccaccgcgac gaccagcgga tgatggatca cccggcgctg accgccccgc
      601 tggatgatat gggcgtggca caggatttgc tggcgcgggt cggccccgaa cggatcgccg
      661 ccgccttcgt gcaattgtgg cgcgagggcc ggccgccgcc cgaagtcctg tccgacgtgc
      721 cgcagcccgc gcaagctgcg ccgcgcgcgc cgcgcgattt cggcgccgcc gtctggttcg
      781 cgctgtcggt cggccatagc ggacgggccg aggcgcgctg gcttctgccc aagatctgcg
      841 agtccggcgg catcacccgc gacgcgatcg gcgcgattcg ggtgcgcgag catgaaaccc
      901 atgtccagat cgccatcgcc gaggcccccc gcttcggcga aacgaccgag atcgagccgg
      961 gcctgaccat gcgccggctt cagggcgagc cgggaccgga acgcgcggcg gtgaaatcgc
     1021 ccggatcggc ccgtcccgcg cgcgcgccgc aacccgaggg cacgcccgga tcaaggcccg
     1081 cagccccggt tcgtgccgcg gcgaaacccg ccccggcagg caagcgcgcc gaggccgacg
     1141 cgcccgccaa ggcccgggcg aaaccgcgct ggagcgcggc cgaca
//
LOCUS       DTVW01001349            2791 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_943214, whole
            genome shotgun sequence.
ACCESSION   DTVW01001349 DTVW01000000
VERSION     DTVW01001349.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2791)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2791)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2791
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_943214"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            75..356
                     /locus_tag="EYO87_17880"
     CDS             75..356
                     /locus_tag="EYO87_17880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008191250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HIC67823.1"
                     /translation="MSTPASSVLMDDDRVRVTRYDFAPGDETGWHVHDMEYVIVTLTD
                     CRLRLDLPGGQTTDSTIPAGSAYSRPRGTEHNVANGGAAPMSFIEVELK"
     gene            416..1678
                     /locus_tag="EYO87_17885"
     CDS             416..1678
                     /locus_tag="EYO87_17885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008127653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Zn-dependent hydrolase"
                     /protein_id="HIC67824.1"
                     /translation="MTLTGTAVADNMKIDGDRLWDSLMEMAKIGPGVAGGNNRQTLTD
                     ADAEGRALFRMWCEEAGMNMALDRMGNMFMRHDGEEPDLDPVYIGSHLDTQPTGGKYD
                     GVLGVLSGLEVIRSIRDMGIRTRRPIVVANWTNEEGTRFAPAMLASGVFAGIHDEDYA
                     NSREDAEGRTFGAELDRIGWRGDKEPGRRPIHAMFEYHIEQGPILEAEGKQVGIVTHG
                     QGLWWLQVTLLGKDAHTGSTPMEMRMNAGLGMARITEAVHRIAMEHQPDAVGAVGQAN
                     VYPNSRNVIPGRAVFTIDFRSPDLDKLTSMRTKLEAEATEIAKDLGLGIEIEPVGHFD
                     PVTFDAGLAQSLRDAARRLGYSHMDIVSGAGHDACWINRVAPTVMIMCPCVDGLSHNE
                     AEEISPEWAKAGADVLLHAVLDAAEVVR"
     gene            1748..>2791
                     /gene="hydA"
                     /locus_tag="EYO87_17890"
     CDS             1748..>2791
                     /gene="hydA"
                     /locus_tag="EYO87_17890"
                     /EC_number="3.5.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_353255.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropyrimidinase"
                     /protein_id="HIC67825.1"
                     /translation="MSTVIRNGTIVTADLTYEADVLIEGGRIAAIGQGLTGDTQLDAT
                     GCYVMPGGIDPHTHLEMPFMGTYSADDFESGTRAALAGGTTMVVDFALPSPGQGLLDA
                     LQMWDNKSGRAHCDYSYHMAVTWWGQQVFDEMAEIVDRGITSFKHFMAYKGALMVNDD
                     ELFASFRRVGDLGGIAMVHAENGDVVAELSARLLAEGNTGPEAHAYSRPPQVEGEATN
                     RAIMVADMAGVPLYVVHVSCEDSHEAIRRARQQGKRVWGEPLIQHLTLDESEYFDKDW
                     DHAARRVMSPPFRDKRHQDSLWAGLQSGSLSVVATDHCAFTTEQKRHGVGDFTKIPNG
                     TGGLEDRMPMLWTH"
BASE COUNT          534 a          838 c          968 g          451 t
ORIGIN      
        1 aggcatccgg ggggagacag acatccagga gatcttcgca tgaccaccct cgccgatgtc
       61 ctgaaggcca ccgcatgagc acgcccgcct cctcggtcct gatggatgac gacagggttc
      121 gggtcacgcg ctatgacttt gcgccgggcg acgaaaccgg ctggcatgtt cacgacatgg
      181 aatacgtcat tgtcacgctg accgattgcc ggttgcgcct tgacctgccc ggcgggcaga
      241 cgacggacag cacgatcccg gcgggcagcg cctattcccg gcccagagga accgaacaca
      301 acgtcgccaa tggcggcgcc gccccgatga gctttatcga ggtcgaactt aagtaacaga
      361 cgccactcag ccgaccgcgc ggcaagacgc ggcggccaga caggaaggac gagacatgac
      421 cctgaccgga acggccgtgg ccgacaacat gaagatcgac ggcgacaggc tgtgggacag
      481 cctgatggag atggccaaga tcggccccgg cgtcgccggc ggcaacaatc gccagacgct
      541 gaccgacgcc gatgccgaag gccgcgccct gttccgcatg tggtgcgagg aggcggggat
      601 gaacatggcc ctggaccgga tgggcaacat gttcatgcgc catgatggcg aggagcccga
      661 tctggacccg gtctatatcg gcagccacct ggatacccag ccgaccggcg gcaaatatga
      721 cggcgttctg ggcgtgcttt cggggctgga ggtgatccgc tcgatccggg acatggggat
      781 ccggacgcgc cggcccatcg tggtggcgaa ctggaccaac gaggaaggga ctcgcttcgc
      841 accggcgatg ctggcctcgg gagtttttgc cgggatccat gacgaggatt atgccaacag
      901 ccgcgaggat gccgaaggca ggacattcgg cgcggaactg gaccggatcg gctggcgcgg
      961 cgacaaggag ccgggccggc gtccgatcca tgcgatgttc gaataccata tcgaacaggg
     1021 tccgattctg gaggccgagg gcaagcaggt cggcatcgtc acccacggcc agggtctgtg
     1081 gtggctgcag gtcacgctgc tgggcaagga cgcgcatacc gggtccaccc cgatggagat
     1141 gcggatgaac gcggggcttg gcatggcacg catcacggag gccgttcacc ggatcgcgat
     1201 ggaacatcag ccagacgccg tcggtgcggt gggccaggcc aatgtctatc ccaacagccg
     1261 caacgtgatc cccggccgcg cggtctttac catcgacttc cgcagccccg atctggacaa
     1321 gctgacctcg atgcggacga agttggaggc ggaagcgact gaaatcgcaa aggatcttgg
     1381 tcttggaatc gagatcgagc cggtcggcca tttcgatccg gtgacattcg acgcagggct
     1441 ggcgcaatcg ctgcgcgacg cggcccggcg gctgggctat tcgcatatgg atatcgtcag
     1501 cggcgcgggc cacgacgcct gctggatcaa tcgcgtggcg cccacggtga tgatcatgtg
     1561 cccctgtgtg gacgggctgt cgcataacga ggccgaagag atcagccccg aatgggccaa
     1621 ggccggcgcc gacgtgctgc tgcacgcggt gctggatgcg gcagaggttg tccgctgagg
     1681 cggacggagg ccgggggcgc cgcccccgga cccccggggt atttggacaa cgaagaagag
     1741 gctggtgatg agcacggtta tcagaaacgg aaccatcgtg acggccgatc tgacctatga
     1801 ggcggatgtg ctgatcgagg gtggcaggat cgcggcgatc ggtcagggtc tgaccggcga
     1861 cacgcaactg gacgcgaccg gctgctatgt catgccgggc gggatcgacc cgcacacgca
     1921 tctggaaatg ccgttcatgg gcacctattc cgccgacgat ttcgaatccg gcacccgggc
     1981 cgcgctggcc ggcgggacca cgatggtcgt ggatttcgcc ctgccctcgc ccggtcaggg
     2041 actgctggac gcactgcaga tgtgggacaa caagtccggg cgcgcgcatt gcgattacag
     2101 ttatcacatg gccgtcacct ggtggggtca gcaggtcttt gacgagatgg ccgaaatcgt
     2161 tgatcgcggc atcaccagct tcaagcattt catggcctac aagggcgcgc tgatggtgaa
     2221 tgacgacgag ttgttcgcca gttttcgccg cgtcggcgat ctgggcggga tcgcgatggt
     2281 ccatgccgag aacggcgatg tggtggcgga actgtcggcg cggctgttgg ccgagggcaa
     2341 taccggcccc gaagcgcatg cctattcgcg tccgccgcag gtcgagggcg aggccaccaa
     2401 ccgcgcgatc atggtcgccg acatggcggg tgtgccgctc tatgtcgtgc atgtgtcctg
     2461 cgaggatagt cacgaggcga tccgccgcgc gcgtcagcag ggcaaacggg tctggggcga
     2521 gccgctgatc cagcatctga cgctggatga aagcgagtat ttcgacaagg attgggatca
     2581 cgcggcgcgc cgtgtcatgt cgcccccctt ccgcgacaag cgccatcagg acagcctgtg
     2641 ggcggggctg caatcgggca gcctgtcggt ggtggcgacc gatcattgcg ccttcacgac
     2701 cgagcagaag cgccatggcg tcggcgactt caccaagatc ccgaacggca ccggcggtct
     2761 tgaggatcgg atgccgatgc tgtggaccca c
//
LOCUS       DTVW01001350            2632 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_945719, whole
            genome shotgun sequence.
ACCESSION   DTVW01001350 DTVW01000000
VERSION     DTVW01001350.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2632)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2632)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2632
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_945719"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..110
                     /locus_tag="EYO87_17895"
     CDS             <1..110
                     /locus_tag="EYO87_17895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020040301.1"
                     /note="ATP-binding protein; PstABCS is an ATP dependent
                     phosphate uptake system which is responsible for inorganic
                     phosphate uptake during phosphate starvation; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein"
                     /protein_id="HIC67826.1"
                     /translation="AFFHLGNLVEYGDTDDIFTKPQDSRTEAYISGRIG"
     gene            131..853
                     /gene="phoU"
                     /locus_tag="EYO87_17900"
     CDS             131..853
                     /gene="phoU"
                     /locus_tag="EYO87_17900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017997801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate signaling complex protein PhoU"
                     /protein_id="HIC67827.1"
                     /translation="MDRERHISSAFDRDLEAIQAQLVKMGGMVESAIADAATALESRD
                     EELAEQVRARDKAIDALEAQINEDAARLIALRAPTATDLRMVLAVIKISASLERVGDY
                     AKNMAKRTHVLSQMPAIDGAGLALRRMAQAVDSLVQDALDSYIRRDADLAEDVRQRDL
                     EVDQMYNALFREFLTHMMEDPRNITACMHLHFIAKNTERMGDHATSIAEQVIYLVTGQ
                     LPDEARPKSSSVPAQAGATSGG"
     gene            858..1547
                     /gene="phoB"
                     /locus_tag="EYO87_17905"
     CDS             858..1547
                     /gene="phoB"
                     /locus_tag="EYO87_17905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017997802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate regulon transcriptional regulatory
                     protein PhoB"
                     /protein_id="HIC67828.1"
                     /translation="MSRQTPCVLVVEDEGAQREVLQYNLEAEGFDVVVADNGEDALLL
                     VQEEQPDLMVLDWMLPRVSGIEVCRQVKADPGTRSIPIIMLSARGEETDRVRGLETGA
                     DDYVVKPYSVVELMARLRTQLRRTRPATMGERLSFADIILDAGEHRVFRAGQPLHLGP
                     TEFRLLSTLMEKPGRVWTREQLLDRVWGRDIYVDTRTIDVHVGRLRKALMVNGGDNPV
                     RTVRGTGYALG"
     gene            complement(1532..2437)
                     /locus_tag="EYO87_17910"
     CDS             complement(1532..2437)
                     /locus_tag="EYO87_17910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005979836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribokinase"
                     /protein_id="HIC67829.1"
                     /translation="MAIWNLGSINIDHVYRLDRLPGPGETLASTGHSLGLGGKGANQS
                     IAAARAGAMTHHLGAIGAGDDWVIERLRHAGVCPAAIRQLDAEVTGHAIILLDARAEN
                     MIVIHPGANTALKAADIAAALTGIGPRDTLLIQNETNGQTDAARIARRAGARVIYSAA
                     PFAVEAVRAVMEHVSILAMNEGEARQLFDAIPGDLPVEGLLITRGSKGAEYRDMKAGT
                     TIVQEAFPVAPVDTTAAGDTFAGYVAAALDRGDGMAEALRLASAAAALKVTRPGAGDA
                     IPQLAEVLDFLGDGRRAFAGSQPRA"
BASE COUNT          468 a          866 c          862 g          436 t
ORIGIN      
        1 ccgccttctt ccacctcggc aatctggtgg aatatggcga taccgacgac atcttcacca
       61 aaccgcagga ttcgcggacc gaggcctata tctcgggtcg catcggctga cgccccagga
      121 ggatcccatg atcgaccgcg aaagacatat ctcatcggcc ttcgaccgcg atctcgaagc
      181 gatccaggcg cagctggtga agatgggcgg gatggtcgaa agcgccatcg ccgacgccgc
      241 caccgcgctg gaaagccgcg acgaggaact ggccgaacag gttcgcgccc gtgacaaggc
      301 gatcgacgcg ctggaagcac agatcaacga agacgcggcc cggctgatcg ccctgcgcgc
      361 gccgacggcg accgatctgc gcatggtgct ggcggtcatc aagatcagcg cgtcgctgga
      421 acgggtcggc gattatgcca agaacatggc aaagcgcacc catgtcctgt cccagatgcc
      481 ggccatcgac ggcgcgggct tggccctgcg gcggatggcg caggccgtgg attcgctggt
      541 ccaggatgcg ctggacagct atatccgccg cgatgccgac ctggccgagg atgtgcgtca
      601 gcgcgatctg gaggtggatc agatgtataa cgcgctgttt cgcgaattcc tgacccacat
      661 gatggaggat ccgcgcaaca tcacggcctg catgcacctg catttcatcg ccaagaacac
      721 cgagcggatg ggcgatcacg cgacctccat cgccgaacag gtgatctatc tcgtgaccgg
      781 gcaattgccc gatgaggcgc ggccgaaatc cagcagcgtt ccggcccagg ccggcgcgac
      841 cagcggaggt tgagccgatg agccgacaaa ccccctgtgt tctggtggtc gaggatgaag
      901 gcgcgcagcg cgaggttctg caatacaacc tcgaagccga gggattcgac gtggtcgtcg
      961 ccgataatgg cgaggacgcg ctgttgctgg tgcaggagga acagcccgat ctgatggtgc
     1021 tggactggat gttgcccagg gtgtcgggca tcgaggtctg ccgtcaggtc aaggccgatc
     1081 cgggcacccg gtccatcccg atcatcatgt tgtcggcccg cggcgaggaa accgaccgcg
     1141 tccggggatt ggagaccggt gcggatgatt acgtcgtcaa gccctactcg gtggtggaac
     1201 tgatggcgcg cctgcgcacc cagctgcgcc gcacccgtcc ggcgacgatg ggagaaaggc
     1261 tgagctttgc cgatatcatc ctcgatgcgg gcgaacaccg ggtttttcgc gccggccagc
     1321 cgctgcatct gggtccgacc gaattccggc tgctgtccac gctgatggaa aagccgggcc
     1381 gcgtctggac gcgcgaacag cttctggacc gggtctgggg gcgcgacatc tacgtcgata
     1441 cccgcaccat cgacgttcat gtcggccgcc tgcgcaaggc gctgatggtc aatggcggcg
     1501 acaatccggt ccggacggtg cgcggcacgg gctatgccct gggctgagac ccggcaaagg
     1561 cccgtctgcc gtcgccgaga aaatccagaa cctccgcaag ctggggaatt gcgtcgcccg
     1621 cgcccggccg ggtgaccttc aacgccgcgg cggccgaggc caggcgcagc gcctcggcca
     1681 tgccgtcgcc gcgatccagc gccgccgcga cgtagcccgc gaaagtgtcg cccgcggcgg
     1741 ttgtgtccac cggggccacc ggaaaagcct cttgcactat ggtcgttccg gctttcatat
     1801 cgcgatattc cgcgcccttc gatccgcgcg tgatcagcag gccttcgacc ggcagatctc
     1861 cgggaatggc gtcgaaaagc tgccgcgcct cgccctcgtt catggccagg atcgacacat
     1921 gctccatcac cgcgcgcacc gcctcgaccg cgaagggcgc ggcggaatag atgacccttg
     1981 cgccggcccg ccgggcaatg cgggcggcat ccgtctggcc gttcgtctcg ttctggatca
     2041 gcaatgtgtc acgcggcccg atcccggtca gagcggcggc gatatcggcc gccttcagcg
     2101 ccgtgttggc gcccggatgg atgacgatca tgttctcggc ccgggcatcc agcaggatga
     2161 tcgcatggcc cgtcacctcg gcgtccagct gccggatcgc cgcaggacag acgccggcat
     2221 gccgcagccg ttcgatcacc cagtcgtcgc cggccccgat cgcgcccaga tgatgtgtca
     2281 tcgcccccgc ccgcgccgcc gcgatcgact ggttcgcgcc cttgccgcca aggccaagcg
     2341 aatgcccggt cgatgccagg gtctcgcccg gcccgggcaa gcggtccagt cggtagacgt
     2401 ggtcgatatt gatcgagccc agattccaga tcgccatgtc gtatcctccg tgatgacaag
     2461 tcttgccggc gtgccgcggc ctgtccagta acgaaaaaac gcgcccggtc ggggcgcgct
     2521 tcttcggagt cgaaaggacc gggccgatca gccgggctga tgcttgccct tgtggcgcgc
     2581 ccaaagtcgc ttgttggtca gatacagcag tgccgtcagc acgatcagga ag
//
LOCUS       DTVW01001351            2076 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_949779, whole
            genome shotgun sequence.
ACCESSION   DTVW01001351 DTVW01000000
VERSION     DTVW01001351.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2076)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2076)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2076
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_949779"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..411)
                     /locus_tag="EYO87_17915"
     CDS             complement(<1..411)
                     /locus_tag="EYO87_17915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010138341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenosine(37)-N6)-dimethylallyltransferase
                     MiaA"
                     /protein_id="HIC67830.1"
                     /translation="MSRLDQIDAERHLLIAGPTASGKSALALQVAERQGGLIVNADAM
                     QVWSCWRVLTARPSAADEAAALHALYGHVTPDRSYSVGDWLKDVGRLTDRRLIVVGGT
                     GLYLTALTRGLAYVPPVPPEIRFEGDALVAGKEGL"
     gene            550..1284
                     /locus_tag="EYO87_17920"
     CDS             550..1284
                     /locus_tag="EYO87_17920"
                     /EC_number="2.7.4.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002719855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HIC67831.1"
                     /translation="MTEEKGAAPAQYGRVMLKISGEALMGDQGFGLNPPTVARIANEV
                     ESVQKMGVEVCMVIGGGNIFRGLQGSAQGMERTTADYMGMLATVMNALAMQSALEAKG
                     LHCRVISAIRMDEVCEPYIRRRAIRHLEKGRVVIFAAGTGNPYFTTDTAATLRANEMN
                     CEAIFKGTKVDGVYDKDPKKFPDAKRYGEVSYDEVLQKHLGVMDASAIALARDNRLPI
                     VVFSLDEPGGFRAILEGRGTYTRVHS"
     gene            1485..2048
                     /locus_tag="EYO87_17925"
     CDS             1485..2048
                     /locus_tag="EYO87_17925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005617897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome recycling factor"
                     /protein_id="HIC67832.1"
                     /translation="MAEDIEIDIDDLERRMKGAMDSLRHEFGSLRTGRASASMVEPVQ
                     VEAYGQMTPINQLGTVNVPEPRMVTINIWDKSMVGKAEKAIRESGLGINPQTNGTIIM
                     LPIPELNEERRRELTKVAAQYAEHARVAIRNVRRDGMDQVKKGKAEGMPEDDQKFWET
                     AVQELTDKMIGQVDEALEAKQAEIMQV"
BASE COUNT          421 a          652 c          689 g          314 t
ORIGIN      
        1 aagtccttcc ttgcctgcca ccagggcatc gccctcgaac ctgatttcag gcgggacggg
       61 gggcacatag gccagacccc gcgtcagggc cgtcaggtaa agcccggttc cgccgacgac
      121 gatcagcctg cggtccgtca gccggccgac atccttcagc cagtcgccga ccgaatagct
      181 gcgatccggc gtgacatgac cataaagcgc atggagtgcc gcggcctcgt cggcggccga
      241 ggggcgcgcc gtcagaacgc gccagcagga ccagacctgc atcgcatccg cattgacgat
      301 cagcccgccc tgccgctcgg ccacctgcag cgcaagcgcg gatttgccgc tggcggtcgg
      361 ccccgcgatc agcaggtggc gctcggcgtc gatctgatca aggcgggaca tcgccgggcg
      421 gtccttggcc ggttgaacac gcccgccttt tgcgacattt tgcgcggcga tgaaagcgac
      481 ccgccccatc agccccatta tcggccgcgc tatcagccca gtagcagccg cattcaggaa
      541 ggatcggaca tgaccgaaga gaagggcgca gcgcccgcgc agtatggccg cgtgatgctg
      601 aagatctcgg gcgaggcgct gatgggcgac cagggcttcg gtctgaaccc gccgaccgtc
      661 gcgcgtatcg ccaacgaggt cgaatcggtt cagaagatgg gcgtcgaggt ctgcatggtc
      721 atcggcggcg gcaacatctt ccgcggcctg caaggcagcg cgcaggggat ggagcggacg
      781 accgccgatt acatggggat gctggccacg gtgatgaatg cgctggccat gcaatcggcg
      841 ctggaagcca agggcctgca ttgccgcgtc atcagcgcca tccgcatgga cgaagtctgc
      901 gaaccctata tccgcaggcg tgccatccga catctggaaa agggccgcgt cgtgatcttt
      961 gccgccggca ccggcaatcc ctatttcacc accgacaccg ccgcgaccct gcgcgccaac
     1021 gagatgaatt gcgaggcgat cttcaagggc accaaggtgg atggcgtcta tgacaaggat
     1081 ccgaagaaat tccccgatgc caaacgctat ggcgaggtca gctacgacga ggtgctgcaa
     1141 aagcatctgg gcgtgatgga tgcctcggcc atcgcgctgg cccgcgacaa ccggctgccg
     1201 atcgtcgtct tctcgctgga cgagcctggt ggcttcaggg cgatcctgga aggtcgcggc
     1261 acctataccc gcgttcatag ctgacccccc ccggcatgtg gatcgcggca atgtgcaatt
     1321 tcccctgagc cgcgatccgg cggcggccgg cggcggggtc gaaaaggtcg cccgcgggct
     1381 ggccggtcgc cggcgcgatg ccgcctgacc ttcgggcaaa tgctttgcca aggcccggca
     1441 atgcggttac aagcggtgaa aattctacgc agaggcagtg ccacatggca gaggatatcg
     1501 aaatcgacat cgacgacctg gaacggagga tgaagggcgc gatggattcg ctgcgccacg
     1561 aattcggcag cctgcggacc ggtcgcgcct cggcttcgat ggtcgagccg gtgcaggtcg
     1621 aggcttatgg ccagatgacg ccgatcaacc agcttggcac cgtcaacgtc cccgagccgc
     1681 ggatggtcac catcaacatc tgggacaagt cgatggtcgg caaggccgaa aaggcgatcc
     1741 gcgaaagcgg tctcggcatc aatccccaga ccaacggcac gatcatcatg ctgccgatcc
     1801 cggaactgaa cgaggagcgg cgcagggaac tgaccaaggt cgcggcgcaa tatgccgaac
     1861 acgcgcgcgt cgcgatccgc aacgtgcgcc gcgacggcat ggatcaggtc aagaagggca
     1921 aggccgaggg aatgcccgag gatgatcaga agttctggga aaccgcggtg caggagctga
     1981 ccgacaagat gatcggccag gtggacgagg cgctggaggc caagcaggcc gagatcatgc
     2041 aggtctgagg cacgggacat ggccgcggat acagca
//
LOCUS       DTVW01001352            2824 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_95196, whole
            genome shotgun sequence.
ACCESSION   DTVW01001352 DTVW01000000
VERSION     DTVW01001352.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2824)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2824)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2824
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_95196"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1544
                     /locus_tag="EYO87_17930"
     CDS             <1..1544
                     /locus_tag="EYO87_17930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009819198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="GMC family oxidoreductase"
                     /protein_id="HIC67833.1"
                     /translation="DGVVVIVGTGAGGGVLANELAQKGIKVAALEAGGRYLPEDYVND
                     EWESFGQLAWTDPRTTSGDWRVAKDFSGLPAWIVKAVGGTSVHWAGASLRFQDHEWKA
                     RTTYGAVEGASLLDWPIGSEEMAPWYDKAEEKLGVTGVGGRPRLPGSNNYKVLEKGAK
                     ALGYKEVHTGNMAINSVEYDDRISCQQTGFCFQGCKWGAKWSAAYTDIPRGEATGKLE
                     VRENAHAARILHDDTGKVTGVEYFDKDGNLQMQKARIVCVAGNSFESPRLLLNSASSM
                     FPDGLANSSGQVGRNYMRHTTGSVYGVFEKPVRMWRGTTMAGIIRDEARHDPSRGFVG
                     GYELETLSLGLPFMAAFLDPGAWGREFTTALDSYENMAGLWIVGEDMPQETNRVTLSD
                     VEDRFGLKVANVNFSDHPNDIAMRNHAYGVGQAIYKEVGATRTMPTPPYPSTHNLGTN
                     RMSEKPSDGVVDKNGRSHDVKNLFVSDGSQFTTGAAENPTLTIVALAIRQADHIAGEM
                     AAGNV"
     gene            complement(1615..2118)
                     /locus_tag="EYO87_17935"
     CDS             complement(1615..2118)
                     /locus_tag="EYO87_17935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008229864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF892 family protein"
                     /protein_id="HIC67834.1"
                     /translation="MTVKNLKDLYLDQLSDLYSACKQSMPAVTEMGRAAKSRELSEAL
                     INGNQGIARGMEVLAELCSRHDVDPTGEHCKGMEGLVAEARKHAIETDFADDDAQDAA
                     IITQYQRLAHYAIAGYGCVRTFANRLDLDSDAAALQECLDKTWEGDRHMSKIAEGGVN
                     AAAMDGR"
     gene            2286..>2824
                     /locus_tag="EYO87_17940"
     CDS             2286..>2824
                     /locus_tag="EYO87_17940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011747084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIC67835.1"
                     /translation="MFAWFERRIDPYPGDSPAMPPRSLWRFLLHYSHGALPWLTLLAA
                     FSGVIALIEVMLFGWLGDLVDRMADTPRALFWTQQGGRLALMALVLLILLPGLNLIAS
                     LVLHQSLMGNFPQRIRWQAHRYLLRQSIGYFQDEFAGRIAQRLMQTALAVREVAMKIM
                     DVGSYVLIYFLGALALADS"
BASE COUNT          510 a          852 c          939 g          523 t
ORIGIN      
        1 acgacggcgt cgtggtcatc gtcggcaccg gcgccggcgg cggggtgctg gcgaacgaac
       61 tggctcagaa gggcatcaag gtcgccgccc tggaggccgg cgggcgctat ctacccgagg
      121 attacgtgaa cgacgaatgg gaaagtttcg ggcaactggc ctggaccgat ccgcgcacga
      181 ccagcggcga ctggcgggtg gccaaggatt tttcgggcct gccggcctgg atcgtgaagg
      241 cggtcggcgg aacctcggtc cattgggccg gcgcctcgct gcggtttcag gatcacgagt
      301 ggaaggccag gacgacctat ggcgcggtcg agggggccag cctgctggac tggccgatcg
      361 gaagcgagga gatggcgccc tggtacgaca aggccgagga aaagctgggt gtcaccggtg
      421 tcggcggccg tccgcgtctt cccggcagca acaattacaa ggtgctggaa aagggcgcca
      481 aggcgcttgg ttacaaggaa gtccataccg gcaacatggc gatcaacagt gtcgaatatg
      541 acgaccggat ctcttgccag cagacgggtt tctgctttca gggctgcaaa tggggcgcca
      601 aatggtccgc cgcctatacc gacatcccgc gtggcgaggc gaccggcaag ctggaggtcc
      661 gcgagaacgc ccatgccgcg cgcatcctgc atgatgacac gggcaaggtc accggcgtcg
      721 aatatttcga caaggatggc aatctgcaga tgcagaaggc ccggatcgtc tgtgtcgcgg
      781 ggaacagttt cgaaagcccg cggctgctgc tgaactctgc cagttcgatg ttcccggacg
      841 ggctggccaa ttcctcgggg caggtgggcc gcaactacat gcggcatacg accggatcgg
      901 tctatggcgt gttcgaaaag cctgtccgga tgtggcgggg cacgaccatg gccggcatca
      961 tccgtgacga ggcaagacac gatccctcgc gcggattcgt cggtggctat gagctggaaa
     1021 cgctcagcct ggggctgccc ttcatggcgg ccttcctgga tcccggagcc tggggacgag
     1081 agttcacgac ggcgctggac agctacgaga acatggccgg tctttggatc gtgggcgagg
     1141 acatgccgca agaaaccaac cgggtgacgc tttccgatgt cgaggaccgg ttcgggctga
     1201 aggtggccaa cgtcaacttc agcgaccatc ccaacgacat cgcgatgcgc aaccatgcct
     1261 atggtgtcgg gcaggccatc tacaaggaag tgggcgcgac caggacgatg ccgacgccgc
     1321 cctatccctc gacccacaat ctgggcacca acaggatgtc ggaaaaaccc agcgacgggg
     1381 tggtcgacaa gaatggccga tcgcacgatg tgaagaacct gtttgtcagc gatggcagcc
     1441 agttcaccac cggggcggcc gaaaatccga ccctgaccat cgtggcgctg gcgatccggc
     1501 aggccgatca catcgctggc gagatggcgg cgggcaacgt ctgagcccgc ccgtatcagg
     1561 acgccccgcc ggttccggcg gggcgttgac ggtcatcgga tgcggaatgc cgcgtcagcg
     1621 tccatccatc gcggccgcgt tcacaccacc ctcggcaatc ttcgacatgt gccgatcgcc
     1681 ttcccaggtt ttgtccagac attcctgaag cgcggccgcg tcgctgtcga ggtcgagccg
     1741 gttggcgaag gtccgcacgc agccatagcc ggcgatggca taatgcgcga ggcgctgata
     1801 ttgcgtgatg atcgccgcgt cctgggcatc gtcatccgca aaatcagtct cgatcgcatg
     1861 tttgcgcgcc tcggcgacaa ggccttccat gcccttgcaa tgttcgcccg tcgggtcgac
     1921 gtcgtggcgg ctgcaaagtt cggccagaac ctccatcccg cgggcaatgc cctgattgcc
     1981 attgatcagg gcttcggaca actcgcgcga cttggccgcg cggcccatct cggtcacggc
     2041 tggcatggat tgcttgcagg cggaatagag atcgctgagc tggtccagat aaaggtcctt
     2101 cagattcttg acggtcatgt gcatttcctt tccggggcgt tggtgccggg atggcgtggc
     2161 ccgtcgccgc aaaaacgcca tcggccgggc aatgttccga actcgatcaa agatcagcct
     2221 gcttgactcg gcttcgccac cgggtcagca atattgtccg gtttcgcaaa gcctgagacg
     2281 atcccatgtt cgcgtggttc gaacgccgca tcgaccccta tcccggcgac agcccggcga
     2341 tgccgccgcg ctcgctgtgg cgctttctgc tgcattacag tcatggtgcc ttgccgtggc
     2401 tgacgctgct tgccgccttt tcgggcgtca tcgcgctgat cgaggtgatg ctgttcggct
     2461 ggctgggcga cctggtggac cggatggccg acacgccccg cgcgctgttc tggacgcaac
     2521 agggcggacg gctggcactg atggcgctgg tgctgctgat ccttttgccg gggctgaacc
     2581 tgatcgcctc gctggttctg catcagtcgc tgatgggcaa ttttccgcag cgcatccgct
     2641 ggcaggccca ccgctatctg ctgcgtcagt cgatcggcta tttccaggac gaattcgccg
     2701 gccggatcgc gcaaaggctg atgcagacgg cgctggcggt gcgcgaggtc gcgatgaaga
     2761 tcatggacgt gggcagctat gtgctgatct atttcctcgg cgcgctggcg ctggcggata
     2821 gtca
//
LOCUS       DTVW01001353            1822 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_955586, whole
            genome shotgun sequence.
ACCESSION   DTVW01001353 DTVW01000000
VERSION     DTVW01001353.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1822)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1822)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1822
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_955586"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..651)
                     /locus_tag="EYO87_17945"
     CDS             complement(<1..651)
                     /locus_tag="EYO87_17945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007803766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HIC67836.1"
                     /translation="MSHEAKVALVTGAARGIGLASTELFLEQGWRVVMVDRDAEELTS
                     AAAALKGVHVIAADISDREQVQAMAAEALQVFGRVDALVNNAGVALFGRVENTGYEAW
                     REVMQTNLDGVFLCSQALVPALTDSKGAIVNIASISGLRASTLRVAYGTSKAAVIHMT
                     KQFAVELGEKGIRVNCIAPGPVRTKLAMAVHAPEIIAAYYDAIPLNRYGEAREIAEG"
     gene            complement(648..1454)
                     /locus_tag="EYO87_17950"
     CDS             complement(648..1454)
                     /locus_tag="EYO87_17950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018001616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF296 domain-containing protein"
                     /protein_id="HIC67837.1"
                     /translation="MIHPGPRATARVQAVRARLRRVSGRVRAGQGVMDAVAAIFEAAG
                     CRGGMLRLDGAVCDPLHYVLPAFSRDGLHAAWYSDRIALEGPTLVGPATAIIGQKDGA
                     TFLHCHGIWQDRMGHLLPLDSVLARDAVLHGIGSDDAWFEALPDAETAFTLFQPQGGG
                     TGGGLLARLRPGEDVATAIASLCAEHAITDARIHGVGSIDHIRFQDGACVDCMATELH
                     FAGAVLRDGRPHLPIEVVDTDGLVHSGVLAEGANPVGVTVEIVIEPEEMS"
     gene            complement(1463..>1822)
                     /locus_tag="EYO87_17955"
     CDS             complement(1463..>1822)
                     /locus_tag="EYO87_17955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011751040.1"
                     /note="activates fatty acids by binding to coenzyme A;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA synthetase"
                     /protein_id="HIC67838.1"
                     /translation="CSFCSITEHEGRIIQNRSHDSIIREIEEKILTHPAISEVAVLGV
                     PDRKWGEVGWAICVCRPGESATEDEVKDFLADRISGYKRPHRVLFWPELPKSAYGKIT
                     KKLIREALEAQSLLDRA"
BASE COUNT          315 a          647 c          568 g          292 t
ORIGIN      
        1 cccctcggcg atctcgcgtg cctcgccgta gcggttcagc ggaatggcgt cgtaataggc
       61 cgcgatgatt tccggcgcgt gaaccgccat cgccagcttg gtgcgcaccg gaccgggggc
      121 gatgcaattc acacggatgc ccttttcgcc cagttcgacg gcgaattgct tggtcatgtg
      181 gatcaccgcc gccttcgagg tgccataggc cacccgaagg gtcgaggcgc gcagccccga
      241 aatcgaggcg atgttcacga ttgcgccctt gctgtcggtc agcgccggaa ccagcgcctg
      301 cgagcacagg aaaaccccgt ccagattggt ctgcatgacc tcgcgccagg cctcgtaacc
      361 ggtgttctcg acccggccga acagggccac gccggcattg ttgaccagcg cgtccaccct
      421 gccaaagacc tgcaacgcct cggccgccat cgcctgaacc tgttcgcggt ccgaaatgtc
      481 ggcggcaatg acatgcacgc ccttcagggc ggcggcggcg ctggtcagtt cctcggcgtc
      541 ccgatcgacc atgacgacgc gccagccctg ttccagaaac agctccgtgc tggccagccc
      601 gatgccgcgc gcggcccccg tgaccaatgc gacctttgcc tcatggctca tgacatctcc
      661 tccggttcga tgacgatttc gacggtgacg ccgaccgggt ttgcaccctc ggccagaacg
      721 cccgaatgga caaggccatc ggtatcgacg acctcgatgg gcagatgcgg gcggccatcg
      781 cgcagcaccg cacccgcgaa atgcagttcg gtcgccatgc aatcgacgca agcgccatcc
      841 tgaaagcgga tatggtcgat gctgccgacg ccgtggatgc gggcatcggt gatcgcgtgc
      901 tcggcgcaga gcgaggcaat ggccgtcgcc acgtcctcgc ccggccgcag ccgcgccaga
      961 agcccgccgc cggtgccacc gccctgcggc tggaacaggg taaaggcggt ttcggcatcg
     1021 ggcagggcct cgaaccaggc atcgtcgctg ccgatcccgt gcaggacggc atccctggcc
     1081 agcaccgaat ccagcggcag cagatggccc atgcgatcct gccagatgcc gtggcaatgc
     1141 aggaacgtgg cgccatcctt ttgcccgatg atggccgtgg ccggtccgac aagggtcggc
     1201 ccctccagcg cgatccggtc cgaataccag gccgcgtgaa gcccgtcgcg cgagaatgcc
     1261 ggcagaacgt aatgcagcgg atcgcagaca gcgccgtcca gccgcagcat cccgccccgg
     1321 cagcccgcag cctcgaagat cgcggccacc gcgtccatca cgccctgacc ggcgcgaacc
     1381 cggcccgaaa cccgccgcag cctcgcacgg acggcctgca cccgcgccgt ggcgcgcggg
     1441 ccgggatgga tcatgcggcc cttcatgcgc ggtccagcag ggattgcgcc tccagcgcct
     1501 cgcggatcag cttcttggtg atcttgccat aggccgattt cggcagttcc ggccagaaca
     1561 gcacccggtg gggccgcttg tatcccgata tcctgtccgc caggaaatcc ttcacctcgt
     1621 cctcggtcgc gctttcgccg gggcggcaga cgcagatcgc ccagccgacc tcgccccatt
     1681 tgcggtcggg cacgcccagc accgcgacct cggagatcgc cggatgggtc aggatctttt
     1741 cctcgatctc gcgaatgatc gaatcatgcg agcggttctg aatgatgcgc ccttcatgct
     1801 cggtgatcga acagaaggaa ca
//
LOCUS       DTVW01001354            1043 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_960108, whole
            genome shotgun sequence.
ACCESSION   DTVW01001354 DTVW01000000
VERSION     DTVW01001354.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1043)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1043)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1043
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_960108"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(36..590)
                     /locus_tag="EYO87_17960"
     CDS             complement(36..590)
                     /locus_tag="EYO87_17960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010395807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1285 domain-containing protein"
                     /protein_id="HIC67839.1"
                     /translation="MPDRGDKSVSAAGIAEAAGKAAKKGGLPPVHLWNPPFCGDLDME
                     IRADGVWFYEGTPIGRPAMVRLFSTVLKREGDSFFLVTPVEKVGIRVEDAPFIAVDAE
                     IAPDRIIFTTNVGDLVTADAEQPIVIRGTTAEPRPYVHVRAGLEALIDRKTFYRLAAA
                     ADVTGDGDGRAGVRSAGQFFPLEP"
     gene            655..>1043
                     /locus_tag="EYO87_17965"
     CDS             655..>1043
                     /locus_tag="EYO87_17965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018000140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HIC67840.1"
                     /translation="MASDEILVQEVQTLGARLADARASIEGRFVGQHHVVEQVLAAIL
                     SGGHALLVGQPGLGKTMLVDTLSTVLGLDSQRIQFTPDLMPADILGSEVLDVLTDGSR
                     AFRFIEGPVFTQLLMADEINRASPRTQS"
BASE COUNT          170 a          341 c          337 g          195 t
ORIGIN      
        1 atggtcaggt tggcggcgaa gcgcggcatg gggtcctagg gctccagcgg gaagaattgc
       61 ccggccgagc ggacgcccgc gcgtccgtcc ccgtccccgg tgacatcggc tgccgctgcc
      121 agacggtaga aggtcttgcg gtcgatcagc gcctccagac cggcgcggac atgaacatag
      181 ggtcgcggct cggccgtcgt gccgcggatc acgatcggtt gctcggcatc ggccgtcacc
      241 agatcgccga cattggtggt gaagatgatc cggtccggcg cgatctcggc atcgacggcg
      301 atgaatggcg cgtcctcgac acggattccg accttttcga ccggagtcac caggaaaaag
      361 ctgtcgccct cgcgtttcag cacggtcgag aacagcctca ccatggccgg tcgcccgatc
      421 ggggtgcctt catagaacca cacgccatcg gcgcggattt ccatgtccag atcgccgcag
      481 aacggcggat tccacagatg aaccggcggc agtccgcctt tcttcgcggc cttgccggcg
      541 gcttcggcga tgcccgccgc actcacgctt ttgtcacccc gatccggcat tcgttatggt
      601 cgcctccgcc cgatttccct atgctcgggt gtaaagcagc ggaagggcat tgtcatggct
      661 tcggatgaaa ttctggtgca ggaggttcag accctgggtg cgcggcttgc cgatgcgcgc
      721 gccagcatcg aaggccgctt cgtcggtcag caccatgtgg tggagcaggt tctcgcggcg
      781 atcctgtcgg gcggtcatgc gctgctggtc ggccagccgg gactgggcaa gacgatgctg
      841 gtcgatacgc tgtccacggt gctggggctg gacagccagc gcatccagtt cacccccgac
      901 ctgatgccgg ccgatatcct cggctccgag gtgctggacg tgctgaccga tggcagccgt
      961 gccttccgct ttatcgaagg accggtcttc acccagcttc tgatggccga tgaaatcaac
     1021 cgcgccagcc cgcgcaccca atc
//
LOCUS       DTVW01001355            1439 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_962703, whole
            genome shotgun sequence.
ACCESSION   DTVW01001355 DTVW01000000
VERSION     DTVW01001355.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1439)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1439)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1439
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_962703"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..182
                     /locus_tag="EYO87_17970"
     CDS             <1..182
                     /locus_tag="EYO87_17970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010393600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="sulfurtransferase TusA family protein"
                     /protein_id="HIC67841.1"
                     /translation="RLRLVATDPMAVVDVPHFCAEAGHVMIEMRELGDGAHEFTVERG
                     PSAPSAASGLTPGNI"
     gene            192..1172
                     /locus_tag="EYO87_17975"
     CDS             192..1172
                     /locus_tag="EYO87_17975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007796068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rubrerythrin family protein"
                     /protein_id="HIC67842.1"
                     /translation="MRLPILSNRKRFDDLTEQQVLALAISSEEDDARIYRNWADFLRP
                     DYPATAQVFEGMGAEEDDHRRRLIEAHRVRFGEAIPVIRREHVAGYYGRRPAWMMQNL
                     SLRSIRAEAALMEHDAAEFYARAAQASSDAGTRKLLGDLAAAERGHEARADELAGDHL
                     TDEAGEAEEDVAHRDFILTWVQPGLAGLMDGSVSTLAPIFATAFATQDPATTFLVGLA
                     ASLGAGISMGFTEAASDDGVVSGRGSPLKRGIASGVMTALGGLGHALPYLIPHFWTAT
                     IIAFVVVFIELWTIAWIQNRWMQTPFWRAALQVVVGGGLVFATGVLIGSG"
     gene            1186..>1439
                     /locus_tag="EYO87_17980"
     CDS             1186..>1439
                     /locus_tag="EYO87_17980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018301057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HIC67843.1"
                     /translation="MGERLTYRPLALPDRVQLPPDASLRAARAFRDYMRRRHSVRDFS
                     DAPVAAEVIAACIDAAGSAPSGANQQPWHFAAIRDEAMKAR"
BASE COUNT          215 a          457 c          518 g          249 t
ORIGIN      
        1 cgcggctgcg gctggtcgcc accgatccga tggcggtggt cgatgtgccg catttctgcg
       61 ccgaggcggg ccatgtcatg atcgagatgc gcgaactggg cgatggcgcg catgaattca
      121 ccgtggaaag gggaccttcc gccccctcgg ccgcaagcgg cctcacgccc gggaatattt
      181 gaggaccgaa gatgagattg ccgatcctgt cgaaccgcaa gagatttgat gacctgaccg
      241 aacagcaggt gctggcgctg gcgatttcct cggaagagga tgacgcccgc atctatcgca
      301 actgggccga tttcctgcgg cccgactatc ccgcgacggc gcaggtcttc gaagggatgg
      361 gcgcggaaga agacgatcat cgccgccgcc tgatcgaggc gcatcgggtc cggttcggcg
      421 aggcgatccc ggtgatccgg cgcgaacacg tggccggcta ttacggccgc cgccctgcct
      481 ggatgatgca gaatctgtcg cttcggtcga tccgcgccga ggcggcgctg atggaacatg
      541 acgcggccga attctatgcc cgcgcggcgc aggccagttc ggacgcgggc acgcgcaagc
      601 tgctgggcga tctggccgcg gccgaacgcg gccacgaggc acgggcggac gaactggcag
      661 gggatcatct gaccgacgag gccggcgagg ccgaggagga cgtggcccat cgcgacttca
      721 tcctgacctg ggtccagccc ggactggccg ggctgatgga tggcagcgtc tcgaccctgg
      781 cgccgatctt tgcgaccgcc ttcgccacgc aggatccggc gacgacgttt ctggtcggtc
      841 tggccgccag ccttggggcc ggaatcagca tggggttcac cgaggccgcc tcggatgacg
      901 gggtggtgtc ggggcgcgga tcgccgctga agcggggcat cgcctcgggg gtgatgaccg
      961 cgcttggcgg gctgggccat gcgctgccct atctgatccc gcatttctgg accgcgacca
     1021 tcatcgcctt tgtcgtcgtc ttcatcgaat tgtggacgat cgcctggatc cagaaccgct
     1081 ggatgcagac gcccttctgg cgggcggcct tgcaagtggt ggtgggcggt ggtttggtct
     1141 tcgcgacggg ggtgctgatc ggatccggct gatggccccg tcgcgatggg ggaacgcttg
     1201 acctaccggc ccttggccct gcccgaccgc gtgcaattgc cgcccgatgc ctcgcttcgg
     1261 gccgcgcgcg cctttcgcga ctacatgcgg cggcgccatt cggttcgcga tttcagcgat
     1321 gcgccggtcg cggccgaggt gatcgcggct tgcatcgacg ccgccggcag cgcgccctcg
     1381 ggggcgaacc agcagccgtg gcatttcgcg gcgatccgcg atgaggcgat gaaggcccg
//
LOCUS       DTVW01001356            1453 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_963480, whole
            genome shotgun sequence.
ACCESSION   DTVW01001356 DTVW01000000
VERSION     DTVW01001356.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1453)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1453)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1453
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_963480"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..121)
                     /locus_tag="EYO87_17985"
     CDS             complement(<1..121)
                     /locus_tag="EYO87_17985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antifreeze protein"
                     /protein_id="HIC67844.1"
                     /translation="MALFDILGGEFIEIIEWTDDSRDTMVYRFPTVGKAIKYGA"
     gene            complement(201..1241)
                     /locus_tag="EYO87_17990"
     CDS             complement(201..1241)
                     /locus_tag="EYO87_17990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2927 domain-containing protein"
                     /protein_id="HIC67845.1"
                     /translation="MIDAGRLLPRLRPVPGLVALAVLAACAKGPAIGPAPPPPRPDNI
                     HHAAESADQARLRKARAQRNRAANEAAGQAVQTSGRNSRQQRLAYAETEARLLSQGRL
                     RRDRIPQDAPIDAESLTRDFLAIALRDEYSRDGGNLVASARIAPLRRWQEPVAMQVEF
                     GASADAATRSLYRTEIGRYAARLSRISGHPVRLTASGGNFIVLVLSDDERRRIGPRLA
                     RLVPGIPERDIRIIENLDDDNFCTAFAYAQGAAADYSRAVVLIRAELPPLLRDSCLHE
                     ELAQGMGLSNDSPDARPSIFNDDEEFALLTRHDELLLQILYDRRLRPGMTEAEAAPIV
                     RRIAGELLGESA"
     gene            complement(1238..>1453)
                     /locus_tag="EYO87_17995"
     CDS             complement(1238..>1453)
                     /locus_tag="EYO87_17995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012179453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxic anion resistance protein"
                     /protein_id="HIC67846.1"
                     /translation="VFDIDAVKTANAQLISTIEDSLRIADEGRARRAAAEEDLTRMEG
                     ELRDALSQASAARRSDETAPPARSPRS"
BASE COUNT          223 a          467 c          520 g          243 t
ORIGIN      
        1 gggcgccgta tttgatcgcc ttgccgacgg tcggaaagcg atagaccatg gtgtcgcggc
       61 tgtcgtcggt ccattcgatg atctcgatga attcgccgcc gaggatgtcg aaaagcgcca
      121 tcatatgcct cctggcggcg ctgcgccgct gtcaatcatg ggccaaagcg cctgttccgc
      181 gcaagcgcgg caacgccctg tcaggcgctt tcgccaagca attcaccggc gatccggcgg
      241 acgatggggg cggcttcggc ctcggtcatg ccgggcctga gccggcggtc atagagaatc
      301 tgcaacagca attcgtcgtg tcgggtcagc agcgcgaatt cctcgtcgtc gttgaagatc
      361 gagggccgcg catcggggct gtcattggaa aggcccatgc cctgcgccag ttcctcgtgg
      421 aggcaggaat cgcgcagaag cggcggcaat tcagcgcgga tcagcacaac ggcgcgggaa
      481 taatcggcgg ccgcgccctg ggcataggcg aaagcggtgc agaaattgtc gtcatccaga
      541 ttttcgatga tccggatatc ccgttcggga atgccgggca ccagacgcgc caggcgcggg
      601 ccgatgcggc gacgctcgtc gtcgctgagc acgaggacga tgaaattgcc gccgctggcc
      661 gtcagccgca ccggatggcc gctgatacgg gacagtcgcg cggcatagcg gccgatctcg
      721 gtgcgataca ggctgcgggt cgcagcatcg gccgaggcac cgaattcgac ctgcatcgcc
      781 accggttcct gccatcgccg cagcggcgcg atgcgggcgc tggccaccag gttgccgcca
      841 tcgcggctgt attcgtcacg tagcgcgatc gcaagaaaat cgcgggtcag gctttcggcg
      901 tcgatcggcg cgtcttgcgg gatgcggtcg cggcgcagcc ggccctggga cagcagccgc
      961 gcctcggtct cagcgtaggc caggcgctgc tgccggctgt tgcggccgct ggtctggacg
     1021 gcctgacccg cagcctcgtt cgcggcgcgg ttccgctggg cacgggcctt gcgcagcctt
     1081 gcctgatcgg cgctttcggc ggcgtgatga atgttatcgg gccttggcgg gggcggggcc
     1141 ggaccgatcg ccgggccctt ggcgcaggcg gccaggaccg ccagcgccac aaggcctggc
     1201 acgggccgca ggcgcggcag gaggcggccc gcatcaatca tgaccttggg ctccgggccg
     1261 ggggcgcggt ctcgtcggag cgccgtgccg cgctggcctg cgacagggca tcgcgcaatt
     1321 cgccctccat ccgggtcaga tcctcttcgg cggcggcccg gcgggcgcgg ccctcgtcgg
     1381 cgatgcgaag actgtcctcg atggtcgaga tcagctgggc attggcggtc ttgaccgcat
     1441 caatgtcgaa gac
//
LOCUS       DTVW01001357            4901 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_963682, whole
            genome shotgun sequence.
ACCESSION   DTVW01001357 DTVW01000000
VERSION     DTVW01001357.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 4901)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4901)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4901
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_963682"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            288..1238
                     /locus_tag="EYO87_18000"
     CDS             288..1238
                     /locus_tag="EYO87_18000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011746782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonylcarbamoyl-AMP synthase"
                     /protein_id="HIC67847.1"
                     /translation="MQTERLGATPEGLARAADLLREGGIVAFPTETVYGLGGDATDGR
                     AVAGIYHAKGRPSFNPLIAHVPDLDAAAPLVHLPPEARALAQAFWPGALTLVLPLRDG
                     ARVASLVTAGLPTLAIRVPAHPVAQDLLRQVGRPVAAPSANVSGRISPTSAAHVLDPD
                     GGLDGRIAAVLDAGPCPVGLESTIIGWQDGLPVLLRPGGLPAEAIEAALGRPLGRHAG
                     DPSAPNAPGQLSSHYAPNAALRLEAKEAGEGETLITFAAPGPFSLSAHGDLAEAAANL
                     FDMLRRADREGRPIAVAPIPDHGLGRAINDRLRRAAAPRA"
     gene            complement(1371..2798)
                     /locus_tag="EYO87_18005"
     CDS             complement(1371..2798)
                     /locus_tag="EYO87_18005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_353473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate dehydrogenase"
                     /protein_id="HIC67848.1"
                     /translation="MAIRQTSFRDSVERMFTHAAGLMDLPPGLEEKIRVCNSTYTVRF
                     GVRLRGQIHTFTGYRSVHSEHMEPVKGGIRYSLDVSQDEVEALAALMTYKCALVEVPF
                     GGSKGGLCIDPRAWDADELERITRRFTYELSRRNLISPSQNVPAPDMGTGEREMAWMA
                     DAYKRLHPDDINAKACVTGKPRTAGGIDGRVEATGRGVQYALREFFRHPDVVKQAGLE
                     GTLAGKRVIMQGLGNVGYHAAQFLSAEDQALIICVIERDGAIRNPQGINIDALRGHIQ
                     ATGGVRGFAGGDYAEEGLAALEDECDILIPAAVESVIHRDNAERIRCKLIIEAANGPV
                     TANADEILKRKGIVIIPDMYANAGGVTVSYFEWVKNLSQISLGRLERRHEEARARLMI
                     DELERISADTGTNFALARGFKEAFLHGADELDLVRSGLDDTMREAFGKMKDVWQSNGK
                     VNDFRTAAYVVAIRRVSNVYASLGL"
     gene            3019..3669
                     /locus_tag="EYO87_18010"
     CDS             3019..3669
                     /locus_tag="EYO87_18010"
                     /inference="COORDINATES: protein motif:HMM:PF00440.21"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR family transcriptional regulator"
                     /protein_id="HIC67849.1"
                     /translation="MIDRQRVRIGRKFAQVSEGAKEIFLRDGFSGTSVDDIAAAARVS
                     KATLYSYFADKRLMFEEAMQNERQRLEDAILFDIPADAAPTQAIPALTRQIAEWLVAP
                     DSVRLYRVHVAEAARFPDVARNYHAALHKVLRDRLRERLDHWVARGELRIEDTTLAAE
                     QLVRLAGAEIHDMATLDGGHAPDHDQIARIADSAAQLFLKAHGVSGRNEQSLGAAR"
     gene            3938..4222
                     /locus_tag="EYO87_18015"
     CDS             3938..4222
                     /locus_tag="EYO87_18015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67850.1"
                     /translation="MSIFPFPLALPAAILLAACQPLPSAPTPDASADQCRASGYQGLV
                     GQPRGITDQMTFPVGTRVIGPDDAVTADFRPDRLNIEYGRSDRIEKVSCF"
     gene            4383..4718
                     /locus_tag="EYO87_18020"
     CDS             4383..4718
                     /locus_tag="EYO87_18020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2794 domain-containing protein"
                     /protein_id="HIC67851.1"
                     /translation="MMNAAPPFHADPDRVVFDRSELGLILSVYGRFVAAGEWRDYAMS
                     FLRDAAIFSVFRRATEHPLYRIEKRPRLRNAQGAYLVLGMDGQILKRGHELRPVLRVF
                     DKKLIRAID"
BASE COUNT          791 a         1726 c         1564 g          820 t
ORIGIN      
        1 cgccagcacg gtctgggcca gcttgccggc ctcggtcagg atggcggtcg cggtttcctc
       61 gccagcctcg gaaaaccttt cggtcgcggc cagttcggca taggggacga catggcgcag
      121 gatgaacgaa atctgctcga cgggtgcccg gtaagtcatc tgcctctccc ccattgcgcg
      181 cgcttggcat cgccgccgcg cgcgattatc agactgaacc tggcgggcag catatcggcc
      241 tgccgggcag gctcaaccga aaccccgcgt cacggaaagg ccaagcgatg cagaccgaac
      301 gactgggcgc cacgcccgaa ggcttggccc gtgccgccga cctgttgagg gagggcggca
      361 tcgtggcctt tccgaccgaa accgtctacg gtctgggcgg ggacgcaacc gacggtcggg
      421 ccgtggcggg gatctatcac gccaaggggc ggccatcctt caatccgctg atcgcgcatg
      481 ttccggacct cgacgcggcc gcgcctctgg tccacctgcc ccccgaggcg cgtgcgctgg
      541 cgcaggcctt ctggcccggc gcgctgacgc tggtcctgcc gctgcgggac ggcgcgcggg
      601 tcgcctcgct ggtcacggcg ggcctgccca cgctggcgat ccgcgttccc gcccatcccg
      661 tcgcgcagga tctgctgcgc caggtgggcc gcccggtcgc cgcgccctcg gccaatgttt
      721 cgggccggat cagcccgacc agcgccgcgc atgtgctgga ccccgatgga ggtctggacg
      781 gccgcattgc ggcagtgctg gatgcgggac cctgtccggt gggcctggaa tccaccatca
      841 tcggctggca ggacggcctg ccggtcctgc tgcggcctgg cggcctgccc gccgaggcga
      901 tcgaggccgc gcttggccgg ccgctgggac gacatgcggg cgacccgtca gcgccgaacg
      961 ccccggggca gctgagcagc cattatgccc cgaacgccgc cctgcgcctt gaggcgaaag
     1021 aggccggcga gggtgaaacc ctgatcacct ttgccgcgcc cggcccgttc agcctgtcag
     1081 cccatggcga tctggccgag gccgccgcca accttttcga catgctgcgc cgcgccgacc
     1141 gcgaaggccg ccccatcgcc gtggccccga tccccgatca tggcctgggc cgcgccatca
     1201 acgaccgcct gcgccgcgcc gctgcccccc gcgcataagg agaatgcgaa agccggcccc
     1261 gtcgaggggc atgcctgtcg cgcgcggggg ctcgcccctc ccacgcgcgc tttctgcgga
     1321 tgtcgccggc gcggtcatcc gcccggccga cgcgggacgc gagcagacca ctacaatccc
     1381 agcgaggcat agacattcga cacccgccgg atcgccacca cataggccgc cgtgcggaaa
     1441 tcgttgacct tgccgttcga ctgccagaca tccttcatct tgccgaaggc ctcgcgcatc
     1501 gtgtcgtcca gccccgagcg caccagatcc agttcatccg cgccgtgcag gaaagcctcc
     1561 ttgaagcctc gggccagtgc gaaattcgtg ccggtatcgg ccgagatccg ttcaagctcg
     1621 tcgatcatca gccttgcacg ggcctcttcg tgacggcgct ccaaccggcc cagagagatc
     1681 tgcgacaggt tcttgaccca ttcgaaatag gacaccgtca ccccgccggc attggcatac
     1741 atgtcgggaa tgatgacgat gcccttgcgt ttgaggatct cgtcggcatt ggcggtgacg
     1801 ggaccgttcg cagcctcgat gatcagcttg cacctgatcc gctcggcatt gtcgcgatgg
     1861 atcacgcttt cgaccgccgc cgggatcagg atgtcgcatt catcctccag cgcggccagt
     1921 ccttcctcgg cataatcgcc gcccgcgaag ccgcgcacgc cccccgtcgc ctggatatgg
     1981 ccgcgcagcg cgtcgatgtt gatgccctgc ggattgcgga tggcgccgtc gcgttcgatc
     2041 acgcaaatga tcagggcctg gtcctcggcc gacaggaact gcgcggcgtg atagccgaca
     2101 ttgcccagcc cctgcatgat gacgcgcttg cccgccagcg tgccttccag cccggcctgc
     2161 ttcacaacgt cgggatggcg gaagaattcg cgcagcgcgt attgcacgcc ccgccccgtc
     2221 gcctcgaccc ggccgtcgat gccgcccgcg gtgcgcggct tgccggtcac gcaggccttg
     2281 gcgttgatgt cgtcgggatg cagccgcttg taggcatcgg ccatccaggc catctcgcgt
     2341 tcgcccgtgc ccatgtcggg ggccggcacg ttctggctgg gcgagatcag gttgcggcgc
     2401 gacaattcat aggtgaagcg ccgggtgatc cgttccagct cgtcggcgtc ccaggcccgc
     2461 gggtcgatgc acaaaccgcc cttggatccc ccgaacggca cctcgaccag cgcgcattta
     2521 taggtcatca gcgcggccag cgcctcgacc tcgtcctggc tgacatccag cgaatagcgg
     2581 atgccgccct tgaccggctc catatgttcg gaatggaccg agcgatagcc ggtgaaggtg
     2641 tggatctgcc cccgcagccg cacgccgaac cggaccgtat aggtcgaatt gcagacgcgg
     2701 atcttttcct ccagtcccgg cggcaggtcc atcagaccgg cggcatgggt gaacatccgt
     2761 tcgaccgaat cgcgaaacga ggtctgtctg atcgccatct gcttcctccc agcttctgct
     2821 gaattccgat ttcacgccga ggctagggca aagcggcggc gggttccaac gatctttgcc
     2881 acgatcgctt tcggcgaaac tccgcggccc ggaaccgctc agatcggcga aaattcccca
     2941 ccaaggaaac atccgctctg gtttctgcat tgactcactg gtgtgaattt cgtccgcata
     3001 tgcgacaggg ataaaaatat gattgatcgt cagagagtta ggatcggacg caaattcgcg
     3061 caagtcagcg agggcgcgaa agagatattc ctgcgggacg gattttcggg caccagcgtc
     3121 gatgacatcg ccgccgccgc cagggtttcc aaggccacgc tctacagcta tttcgccgac
     3181 aagcggctga tgttcgaaga ggcgatgcag aacgagcggc agcggctgga agacgcgatt
     3241 ctcttcgata tccccgccga cgccgccccg acccaggcga tccccgccct gacacggcag
     3301 atcgccgaat ggctggtcgc ccccgacagc gtgcggctgt atcgtgttca tgtcgccgag
     3361 gcggcgcgct ttcccgatgt cgcccggaac tatcatgcgg cgctgcacaa ggtgctgcgt
     3421 gaccggctgc gcgagcggct ggaccattgg gtcgcgcggg gcgaattgcg catcgaggac
     3481 acgacgctgg cggccgaaca actggtccgc ctcgccggag ccgagataca tgacatggcg
     3541 acactggacg gaggccacgc gccggatcat gaccagatcg cgcgcatcgc cgacagcgcc
     3601 gcgcagctgt tcctgaaagc ccacggcgtg tccgggcgca acgagcagtc gctgggcgcg
     3661 gcgcgctgat gaggcgggcc gtccggatcg cgccggcagc cacacggccg cgaagggaac
     3721 agatcgtgac gccggcgcgg cttctcaaat cccgccgccc tgactataat gcggtatcag
     3781 cagcccgcgc caaggccggg atccccagag gccgcacgcg accatgacca attcaggcca
     3841 gaacctcatc gccgcgccgc aggccacacg cggcggggga ccatttttcc acttgatgcg
     3901 ggcagcgtca tcgacaacct cgagcgaggg tgattccatg agcatttttc cgttcccgct
     3961 ggccttgcct gccgccatcc tgctggcggc ctgtcagcct ctgccttcgg ccccgacacc
     4021 ggatgcgtcc gcggaccaat gccgtgcctc gggctatcag ggccttgtcg gccagccacg
     4081 cgggatcacc gaccagatga cctttccggt cgggacccgc gtcatcggcc ccgacgatgc
     4141 cgtgaccgcc gatttccgcc ccgaccggct gaacatcgaa tacggccgca gcgaccggat
     4201 cgagaaggtc agttgcttct gattcgaccg gcccgcgccg tcggcgcagc tttctggcga
     4261 cctgggtgcg acgcggcagc cccgcctgcc gggaatggcg gcggcctctg tcctgccgac
     4321 gcgctggccc ggcccgcatt tgccggattg atttgcggcg ggcgcaatgt caccatccgg
     4381 tcatgatgaa cgccgccccg ccgtttcacg ccgatcccga ccgcgtggtt ttcgaccgat
     4441 ccgagcttgg gctgatcctg tccgtgtatg gccgatttgt cgcggcgggc gaatggcgcg
     4501 attatgccat gtcgttcctg cgcgacgcgg ccatcttcag cgtgttccgg cgcgccaccg
     4561 aacatccgct gtatcgcatc gagaaacgcc cccgcctgcg caacgcccag ggcgcctatc
     4621 tggtgctggg catggatggc cagatcctga aacgcggcca tgaattgcga ccggtgctgc
     4681 gcgtcttcga caagaaactg atccgcgcca tcgactgagc gcgagcggac aaagcccccg
     4741 cggccatcgg gcatccgatc gccgaaagac cggtcggcag ccgcagggca gcggcgcttg
     4801 ccgcggggcc gtcgctcaga ccccggcctc ggccgcgatc tgcgccttcg acctgcgccc
     4861 gcgttcggtg gccgatttca actgcccgca ggcggccatg a
//
LOCUS       DTVW01001358            2915 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_966300, whole
            genome shotgun sequence.
ACCESSION   DTVW01001358 DTVW01000000
VERSION     DTVW01001358.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2915)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2915)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2915
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_966300"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..417
                     /locus_tag="EYO87_18025"
     CDS             <1..417
                     /locus_tag="EYO87_18025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019296510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease"
                     /protein_id="HIC67852.1"
                     /translation="QSIFFSEELNQALIILITFAGISYAARHGRHIRMSAFFDALPFR
                     LRKMMMILISALTAAVMLLLAWYAMDYVLTQASRGRVLPALQIPQWWIIVWAPLGFFL
                     TGLQYTLTTIKNMIDRDIWLSTSTLEGYDDSVEEEV"
     gene            424..1710
                     /locus_tag="EYO87_18030"
     CDS             424..1710
                     /locus_tag="EYO87_18030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008558542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease"
                     /protein_id="HIC67853.1"
                     /translation="MTWAIFGTMIVLLLLGFPMMIPLIAGSLIGFVTLFGGFSQLDTM
                     IQQILGGIRPASLIAVPMFIFAADIMTRGQSANRLIDLVMAFVGHLRGGLAISTAGAC
                     TMFGAVSGSTQATVVAVGGPLRPRMLKAGYNDSFVLALIVNSSDIAFLIPPSIGMIIY
                     GVVSGTSISELFIAGIGPGLLILLMFSVYSYIYAVRNDVPTLPKSSWGERGQAVLRAL
                     WPLGFPAIIIGGIYGGIFSPTEAAAACVLYALFLEMIVFRELSVKQLYATAKSTGLIT
                     AVVFILVGAGAAFSYVISFAQIPQQVLESIGINEMGAYGVLFTISIAFFIGCMFVDPI
                     VVILVFVPIFAPVVQSVGLDPVLVGTIITLQVAIGSATPPFGADIFTAIAVFKRPYID
                     VIRGTPPFILMLLTVAVLLIFFPQIALFLRDLAFDK"
     gene            1720..2163
                     /locus_tag="EYO87_18035"
     CDS             1720..2163
                     /locus_tag="EYO87_18035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007008767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HIC67854.1"
                     /translation="MFRKILVGYDGSNGSHRALTQAVEMAKLCDAQLIILTVYRHHSM
                     LEASLSMVRGSLEPGGNLDEAMRSTARNAADYAKSHARDAGVVQVSAFIKAGPPARTL
                     ISVAHEKGCDLIVVGSRGLGATENYLLGSVSHKVTGLAACPVLVV"
     gene            2179..2883
                     /locus_tag="EYO87_18040"
     CDS             2179..2883
                     /locus_tag="EYO87_18040"
                     /inference="COORDINATES: protein motif:HMM:PF01177.20"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ectoine utilization protein EutA"
                     /protein_id="HIC67855.1"
                     /translation="MWRDDVNRFGLIALATDLTIEGDAQRLLPPGCRLHVTRIAFDNP
                     TTAENLKKTGPHLKAASDLLVPGVALKGIAFGCTSASAVLGDGVQQAIGSRAPVSTPV
                     AAALRGFAALGVTRIALMTPYLRETTDLVGDHFQANGLDVVSRRSMGHADDRDMALLS
                     ADEIVEFAQASDHPQAEALFMSCTALPAVSVIERLEETIGKPVLSSNLALFWSMLDIA
                     RIPAQGTGRLFQVRTW"
BASE COUNT          454 a          919 c          941 g          601 t
ORIGIN      
        1 cagagcatct tcttttccga ggaactgaac caggcgctga tcatcctgat caccttcgcg
       61 ggcatttcct acgccgcgcg gcatggccgg catatccgca tgtcggcctt tttcgacgcc
      121 ctgccgttcc ggctgcgcaa gatgatgatg atcctgattt ccgccctgac ggcggcggtt
      181 atgctgctgc tggcctggta tgcgatggat tacgtgctga cgcaggcctc gcgcgggcgg
      241 gtgctgccgg cgctgcagat cccgcaatgg tggatcatcg tctgggcacc gctgggcttt
      301 ttcctgaccg gcctgcaata cacgctgacc acgatcaaga acatgatcga ccgcgacatc
      361 tggctgtcca ccagcacgct ggaaggctat gacgacagcg tggaagagga ggtctgagcg
      421 atgatgacct gggcaatctt cggcaccatg atcgtccttc tgctgctggg ctttccgatg
      481 atgatcccgc tgatcgcggg ctcgctgatc ggcttcgtca cgctgttcgg cggcttttcg
      541 cagctggata cgatgatcca gcagatcctg ggcggcatca ggcccgccag cctgatcgcg
      601 gtgccgatgt tcatcttcgc tgccgacatc atgacgcgcg gtcagtcggc gaatcgcctg
      661 atcgatctgg tgatggcctt tgtcgggcat ctcagaggcg ggcttgcgat ctcgaccgcg
      721 ggggcctgca ccatgttcgg cgccgtctca ggctcgaccc aggccaccgt cgtggcggtc
      781 ggcggaccgc tgcggccgcg gatgctgaag gcgggctaca atgacagctt cgtccttgcg
      841 ctgatcgtga attcctcgga catcgccttt ctgatcccgc cctcgatcgg gatgatcatc
      901 tacggcgtcg tctcgggcac ctcgatttcg gaattgttca tcgcgggcat cgggccgggg
      961 ctgctgatcc tgctgatgtt ctcggtctac agctacatct acgcggtgcg gaacgacgtg
     1021 cccacactgc ccaagtcgag ttggggcgaa cgcgggcagg ccgtgttgcg cgcgctctgg
     1081 ccgctgggct ttccggcgat catcatcggc ggcatctatg gcggcatctt ctcgccgacc
     1141 gaggctgccg ccgcctgcgt tctctacgcg ctgtttctgg aaatgatcgt ctttcgcgaa
     1201 ctgagcgtga agcaacttta cgccaccgcg aaatcgaccg ggctgatcac ggcggtggtg
     1261 ttcatcctgg tgggcgccgg cgcggccttc agctatgtca tcagtttcgc gcagatcccg
     1321 cagcaagtcc tggaaagtat cggcatcaac gagatgggcg catacggcgt gctgttcacc
     1381 atctcgatcg ccttcttcat cggctgcatg ttcgtcgatc cgatcgtggt gatcctggtc
     1441 ttcgtgccga tcttcgcgcc ggtggtgcaa tcggtcggcc tggatccggt cctggtcggc
     1501 acgatcatca cccttcaggt ggcgatcggc agtgccacac cgcctttcgg cgccgatatc
     1561 ttcaccgcca tcgcggtctt caaacggccc tatatcgatg tgatccgggg cacgccgccg
     1621 ttcatcctga tgctgctgac ggtggccgtg ctgctgatct tcttcccgca gatcgcgctg
     1681 ttcctgcgcg atctggcctt cgacaagtag aggcgcgcga tgtttcggaa aatcctcgtc
     1741 ggctatgacg gttcgaacgg gtcgcaccgg gccctgacgc aggcggtcga gatggccaag
     1801 ctgtgcgatg cacaactgat catcctgacc gtctatcggc atcactcgat gctggaagcc
     1861 tcgctgtcga tggtacgcgg ctcgctggag ccgggcggca acctggacga ggccatgcga
     1921 tcgaccgcgc gcaacgcggc cgattatgcg aaaagtcatg cccgggatgc cggcgtggtg
     1981 caggtcagcg ccttcatcaa ggccggccct ccggcgcgca cgctgatttc ggtcgcgcat
     2041 gaaaagggct gcgatctgat cgtggtcgga tcgcgcgggc tgggcgccac cgagaattac
     2101 ctgctgggat cggtcagtca caaggtcacc ggccttgccg cctgtccggt gctggtcgtc
     2161 tgaagggaca aacggaagat gtggcgcgac gacgtgaacc gcttcggcct gatcgcgctg
     2221 gcgacggacc tgaccatcga gggcgacgcg cagcggctgc tgccgccggg ctgccggctg
     2281 catgtcaccc ggatcgcctt tgacaatccc accaccgccg aaaacctgaa gaagaccggc
     2341 ccgcatctga aagcggcctc ggaccttctg gtgccggggg tcgcgctgaa gggcatcgcc
     2401 ttcggctgca cctcggcctc ggcggtgctg ggcgatggcg tgcagcaggc catcggttcg
     2461 cgcgcgccgg tcagcacccc ggtcgcggcg gcgctgcgcg gattcgcggc tctgggcgtc
     2521 acccggatcg ccctgatgac cccctatctg cgcgagacca ccgatctggt cggcgatcat
     2581 tttcaggcca acggccttga cgtggtgtcg cgccggtcga tgggacatgc cgatgaccgc
     2641 gacatggcct tgctgtcggc cgacgagatc gtcgaattcg cgcaggcatc ggatcatccg
     2701 caggcagagg cgctgttcat gtcctgcacc gcgctgccgg cggtttcggt gatcgagcgg
     2761 ctggaagaga cgatcggcaa gccggtgctc agttcgaacc tggccctgtt ctggtcgatg
     2821 ctggacatcg cccgcatccc ggcccaggga acggggcgat tgtttcaggt gcggacatgg
     2881 tgacgctgga cgatatcctg gcggccgcgg aacgc
//
LOCUS       DTVW01001359            1540 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_969060, whole
            genome shotgun sequence.
ACCESSION   DTVW01001359 DTVW01000000
VERSION     DTVW01001359.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1540)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1540)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1540
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_969060"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            44..400
                     /locus_tag="EYO87_18045"
     CDS             44..400
                     /locus_tag="EYO87_18045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67856.1"
                     /translation="MSLMASEAPKPRSDSVILAAMGEGDRSEPEPLEIVSRASDGSRN
                     WGVSLGLYRSRAEADQLLIRSALQDGAVLGNAQRNIANTIRGFEPKFVNLDRADAQLV
                     CERFRTRSQDCKVIGP"
     gene            755..>1540
                     /locus_tag="EYO87_18050"
     CDS             755..>1540
                     /locus_tag="EYO87_18050"
                     /inference="COORDINATES: protein motif:HMM:PF12697.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HIC67857.1"
                     /translation="MRFFKAAMLIAVTALSLGGCAALLDNQVERRAEAAERRFPPTGQ
                     LLEVNGLTVHADIRGQGPDLVLLHGASGSSRDFTFDLVGRLQDRYRVITFDRPGLGWT
                     DPLPEGNDDPRRQADLLRQAADQLGVRNPVVLGHSYGGAVAMAWALGDPDGTAALVLL
                     AGATYPWEGELGGLSPFLATPFGKAVAAPMISAFAPKSTVDRAIAEIFAPNPVPDGYA
                     SYVGAELTLRQDSLLANAQQVANLKPYLEKMAPLYPGLNQPIEI"
BASE COUNT          255 a          504 c          495 g          286 t
ORIGIN      
        1 cgcccgggcc gtcgccgccg cggttccgaa acagggtgat gcgatgtcgc ttatggcctc
       61 tgaagcgccg aagccgcgtt cggattcggt gatccttgcc gcgatgggcg aaggcgaccg
      121 gtccgagccg gaaccgctgg agatcgtctc gcgcgcctct gacggcagcc ggaattgggg
      181 ggtgtcgctg ggtctgtacc gctccagggc cgaagccgac cagttgctga tccgcagcgc
      241 cttgcaggac ggcgcggtgc ttggaaatgc gcagcgcaat atcgccaata cgattcgcgg
      301 tttcgaaccc aagttcgtca atcttgacag ggccgacgca caactggtct gcgaaagatt
      361 ccggacccgc tcgcaggatt gcaaggtaat cggaccctga gcgcgctgcg atgtgccaaa
      421 accgaaccgg gcggggcctt cccgcccgtt tttgctgcgc gcttttccag cctcgctttt
      481 tttggtccgg tgacttcgga tctggtgtcc tgctccgcgc cagccgaccc aaggcgcgag
      541 gaatgcagag attggcccgg gtcagatggg gtgatggcct catggtcgca aacggcaagc
      601 ccgggccgtg gcgtcaaccc gtccgcgccg cttgcgtcac ctgcgacgct tggacaatga
      661 tctgcggatg aacggaaaaa ttcgccaggg tgcaaccgga accctctctc gtccgtgact
      721 gttcgacagg acgacctgcg gagacccgac cgagatgcgc tttttcaagg ccgcgatgct
      781 gattgccgtt accgccctca gccttggcgg ttgcgccgcc ctgctggaca atcaggtcga
      841 gcggcgtgcc gaagcggccg aacggcgttt tcccccgacc ggtcagttgc tcgaggtgaa
      901 cggcctgacg gttcatgccg acattcgcgg gcaaggtccg gatctggtcc tgctgcacgg
      961 tgccagcggc agcagccgcg atttcacctt cgacctggtc gggcgcctgc aggacagata
     1021 ccgcgtcatc accttcgacc gacccggtct gggatggacc gatcccttgc ccgaaggcaa
     1081 cgacgacccg cgccgtcagg ccgatcttct gcgccaggcg gccgaccagc ttggcgtgcg
     1141 caatcctgtc gttctgggcc acagttatgg cggcgcggtt gcgatggcat gggccttggg
     1201 cgatcccgac ggcaccgccg cgctggtcct gctggcgggg gcgacctacc cctgggaagg
     1261 tgagcttggc ggattgtcgc cctttctcgc cactcccttc ggcaaggccg tggccgcacc
     1321 gatgatctcg gccttcgcgc cgaaatccac cgtcgatcgc gcgatcgccg agattttcgc
     1381 gcccaatccg gtgccagacg gctacgcctc ctacgtcggc gccgaactga cgctgcgaca
     1441 ggacagtctg ctggccaatg cgcagcaggt ggcgaatctg aaaccctatc tcgaaaagat
     1501 ggcgccgctc tatccaggtc tgaaccagcc gatcgagatc
//
LOCUS       DTVW01001360            1650 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_979200, whole
            genome shotgun sequence.
ACCESSION   DTVW01001360 DTVW01000000
VERSION     DTVW01001360.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1650)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1650)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1650
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_979200"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..995
                     /locus_tag="EYO87_18055"
     CDS             <1..995
                     /locus_tag="EYO87_18055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010397589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="mannitol dehydrogenase family protein"
                     /protein_id="HIC67858.1"
                     /translation="DAPRTVFGMILAALRARRAAGEAPFTVMSCDNLPENGHVCARTV
                     TELAQLSDPGLAEWIRQNVAFPNSMVDCITPATSDRERALVRDKFGIIDAAPVVCEPF
                     RQWVLEDNFPQGRPPLEKVGAEFVTDVSRHELMKLRILNGGHAAIAYPSALLGHHFVH
                     DAMADPRIAAWLRALEEREIIPTLPPIEGVSYEDYLDLILGRFANPEIGDTIPRLCLD
                     GSNRQPKFILPTLADALRSDAAIDGLAQEVAFWCRYCERIDEAGNEIAPNDENSDALR
                     DYALAARRDPLAFLSNRAVFGALADNPRFQDAFARKLRLVQDQGVGAAIRTYLG"
     gene            complement(1100..1312)
                     /locus_tag="EYO87_18060"
     CDS             complement(1100..1312)
                     /locus_tag="EYO87_18060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67859.1"
                     /translation="MTILGDVFRELFGMFVADLRLTLSVLGGVLLVAILMNSAVLGPV
                     AAGFVLALGCVLILVETVLRETRRGK"
     gene            complement(1309..>1650)
                     /locus_tag="EYO87_18065"
     CDS             complement(1309..>1650)
                     /locus_tag="EYO87_18065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007676901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIC67860.1"
                     /translation="VLLEGLEVAFIVIAIGAGKGLLWEASLGALAACALVLVLGAALR
                     KPLAQVPENTLKFGVGVMLSAFGVFWTGEGLGVRWPGADLALLPLAALFLLAGIGLAH
                     LARALAAGRPA"
BASE COUNT          313 a          589 c          507 g          241 t
ORIGIN      
        1 cggacgcgcc gcgcaccgtc ttcggcatga tcctggcggc gttgcgcgcg cgccgcgcgg
       61 cgggtgaggc gcccttcacg gtcatgtcct gcgacaacct gcccgaaaac ggtcatgtct
      121 gcgcgcgcac cgtgacagaa ctggcgcagt tgtccgatcc cggcctggcc gaatggatcc
      181 gccagaatgt ggcattcccg aattccatgg tcgattgcat cacccccgcc acctcggacc
      241 gcgaacgcgc gctggtgcgg gacaaattcg gcatcatcga cgccgcgccc gtggtctgtg
      301 aacccttccg ccaatgggtg ctggaagaca atttcccgca gggccgcccg ccgctggaaa
      361 aggtcggcgc tgaattcgtg accgatgtca gccggcacga attgatgaag ctgcgtatcc
      421 tgaatggcgg tcacgccgcc atcgcctatc cttccgcgct gctgggccac cacttcgtcc
      481 atgatgcgat ggccgatccc cggatcgccg cctggctgcg cgcgctggag gaacgcgaga
      541 tcatcccgac cctgcccccg atcgagggcg tcagctacga ggattatctc gacctcatcc
      601 tcggccgttt cgcaaatccg gaaatcggcg acaccatccc gcggctgtgc ctcgacgggt
      661 ctaaccggca gccgaaattc atcctgccga ctttggccga cgcgttgcga tcggatgccg
      721 ccatcgacgg gctggcgcaa gaggtcgcct tctggtgccg ctattgcgaa cgtatcgacg
      781 aggccggaaa cgagatcgcg cccaatgacg agaacagcga cgcattgcgc gactatgccc
      841 tggccgcgcg ccgcgatcct ttggccttcc tgtcgaaccg tgccgtcttt ggcgcactgg
      901 ccgacaatcc gcgctttcag gacgctttcg cccgcaagct gagactggtg caggatcagg
      961 gtgtcggcgc cgcgatcagg acctatctgg gctgacgcgg tggccccgcc gtcctgacgc
     1021 ccgctgtcgc cgcaaggccc acgccgccat gcgatcgccc agacaccgga atggcggacc
     1081 agccggccgc gcccctgcat cacttgccgc ggcgcgtctc gcgcaggacc gtttcgacaa
     1141 ggatcaggac gcaaccaagc gccagcacga accctgccgc gacgggcccc agcacggcgc
     1201 tgttcatcag gatggcgaca agcagaacgc cacccagaac cgacagcgtc agccgcaggt
     1261 cggccacgaa catcccgaaa agctccctga agacatcgcc caggattgtc atgccggccg
     1321 ccccgcggcc aaggcgcgcg ccagatgggc aaggccgatg cccgccaaca ggaaaagcgc
     1381 cgccaggggc aagagtgcga gatccgcacc aggccaccgc acgcccagcc cttcgccggt
     1441 ccagaacacg ccaaaggccg acagcatgac gccaaccccg aacttcagcg tattttcagg
     1501 aacctgggcc aagggcttgc gcagagcggc gcccaggacc agcaccaggg cgcaggcggc
     1561 aagggcgcca agcgaggcct cccacagcag gcccttgccg gcaccgatgg cgatgacgat
     1621 gaaagcgacc tccaggcctt cgagaagaac
//
LOCUS       DTVW01001361            2032 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_983431, whole
            genome shotgun sequence.
ACCESSION   DTVW01001361 DTVW01000000
VERSION     DTVW01001361.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2032)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2032)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2032
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_983431"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..318
                     /locus_tag="EYO87_18070"
     CDS             <1..318
                     /locus_tag="EYO87_18070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl aminopeptidase"
                     /protein_id="HIC67861.1"
                     /translation="DLAGNILAAARAEGEGAWRLPLGKSYDDLIKSRLADMKNTGGRA
                     AGSITAAQFLQRFVRKGQPWAHIDIAGVALPPSATDLAPKGATGWGVMTLDRLIRDRF
                     EAE"
     gene            438..887
                     /locus_tag="EYO87_18075"
     CDS             438..887
                     /locus_tag="EYO87_18075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011747243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit chi"
                     /protein_id="HIC67862.1"
                     /translation="MGNALFYHLTRSPAESLLPVLIGKSLAAGWRVELRGTDPERMDQ
                     LDRHLWQGDGFLPHGLAGGPHDARQPVLLTVAGQPATNRSSCLMALEGVEVAVQEVQT
                     LQRACIIFDGGDAVATTRARDQWKALTGAGVTAEYWSEESGRWERKR"
     gene            complement(951..1574)
                     /gene="ureG"
                     /locus_tag="EYO87_18080"
     CDS             complement(951..1574)
                     /gene="ureG"
                     /locus_tag="EYO87_18080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013066960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urease accessory protein UreG"
                     /protein_id="HIC67863.1"
                     /translation="MTHHGPLRVGIGGPVGAGKTTLTEQLARALAQRLSMAVITNDIY
                     TREDAEALMRAQVLPAERIRGVETGGCPHTAIREDASINLAAIADLNAAFPDLDLVLI
                     ESGGDNLAATFSPELADLTIYVIDTAAGQDIPRKRGPGLARSDLLVVNKIDLAPHVGV
                     DIALLERDARQSRACRPVIMASLRRAEGADAIADFLIHEGGLTPRPA"
     gene            complement(1571..>2032)
                     /locus_tag="EYO87_18085"
     CDS             complement(1571..>2032)
                     /locus_tag="EYO87_18085"
                     /inference="COORDINATES: protein motif:HMM:PF01730.14"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urease accessory protein UreF"
                     /protein_id="HIC67864.1"
                     /translation="DAVLVALSLRADADHDALDDLARATCPSAQRLAETVEQGTAFSA
                     NASALGQALPAAALPVAFGRACADMPLPDTESIAAYLQAQAAALISTAVRFMPLGPVE
                     GQAMLAALQPAILRAAHRASTAGETELHSATWGADIAAMRHETMQTRIFRS"
BASE COUNT          308 a          697 c          723 g          304 t
ORIGIN      
        1 gatctggccg gcaacattct ggctgccgcg cgggccgagg gcgagggcgc gtggcgcctt
       61 ccgctgggca agtcctatga cgatctgatc aagtcgcgtc tggccgacat gaagaatacg
      121 ggcggccgcg cggcgggctc gatcacggcg gcgcagttcc tgcaacgctt cgtgcgcaag
      181 ggccagccct gggcgcatat cgacatcgcc ggcgtcgccc tgccgccctc ggccaccgat
      241 ctggcaccga aaggggcgac cggctggggg gtgatgacgc tggaccggct gatccgcgac
      301 cgcttcgagg ccgaatgaga cgcgcgaggc tggcagcccg gacatgcgcc gccgacaagg
      361 aaccgggcct tcgcgccggc gcccgacccg gcggcgtgcg ccgatccgac agcggatggt
      421 acccggtatc ctgagcgatg ggaaacgcgc tgttctatca tctcacccgc tcgcccgccg
      481 aatcgctgct gccggttctc atcggcaagt cgctggcggc gggctggcgc gtggaattgc
      541 gcggcaccga ccccgagcgc atggaccagc tggaccgcca tctgtggcag ggcgacggtt
      601 ttctgcccca cggtcttgcc ggaggccccc atgatgcacg ccagccggtt ctgctgaccg
      661 tcgcgggaca gcccgccacc aaccgaagct cgtgcctgat ggcgctggag ggggtcgagg
      721 tcgcggtgca ggaggtccag acattgcaac gcgcctgcat catcttcgat ggcggggacg
      781 ccgtcgccac gacccgcgct cgcgaccagt ggaaggcgct gaccggcgcc ggcgtgaccg
      841 ccgaatactg gtccgaggaa agcggccgct gggaacgcaa acgctgaccc gcggatccgc
      901 gcggcgtgat tcgcggcggc gatcatccga tgccggggtg ccgtcccttg ctatgccggc
      961 ctcggcgtca ggccgccctc atggatcagg aaatcggcga tggcatcggc gccctcggcc
     1021 cggcgcagcg aagccatgat caccggacgg caagcacgcg attgccgcgc atcgcgttca
     1081 agcagggcaa tatcgacgcc gacatggggc gccaggtcga tcttgttgac caccagcaga
     1141 tccgatcgcg ccaggcccgg gccgcgcttg cgcggaatgt cctgcccggc ggcggtgtcg
     1201 atgacataga tcgtcagatc cgccagttcc gggctgaagg tcgccgccag attgtcgccg
     1261 ccggattcga tcagcaccag atccagatcg ggaaaggccg cgttcagatc ggcgatggcg
     1321 gccaggttga tgctggcatc ctcgcggatc gcggtatgcg ggcagccgcc ggtctcgacg
     1381 ccccggatcc gttccgccgg cagcacctgc gcgcgcatca gcgcctcggc atcctcgcgc
     1441 gtatagatgt cgttggtgat gaccgccatc gacaggcgtt gcgccagcgc gcgggcgagc
     1501 tgttcggtca gggtggtctt tcccgcgccg acggggccgc cgatgccgac gcgaaggggg
     1561 ccatgatggg tcatgatcgg aaaatcctcg tctgcatggt ctcgtgccgc atggcggcga
     1621 tatcggcgcc ccatgtcgcg ctgtgaagct cggtttcgcc ggccgtcgat gcgcgatgcg
     1681 ccgcgcgcag gatcgccggc tgcagcgcgg ccagcatcgc ctggccctcg accgggccca
     1741 gcggcatgaa ccgaaccgcc gtgctgatca gcgccgccgc ctgcgcctga aggtaggccg
     1801 cgatgctttc cgtgtccggc agcggcatgt cggcgcaggc gcgtccgaag gccacgggca
     1861 gggcggcggc gggcagcgcc tggcccaggg ccgaggcgtt ggcggaaaac gccgtgccct
     1921 gttctaccgt ctcggccaac cgctgcgcgc ttgggcaggt cgcgcgcgcc agatcgtcaa
     1981 gcgcgtcgtg gtcggcatcc gcgcgcagcg acagcgcgac cagaaccgca tc
//
LOCUS       DTVW01001362            2302 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_983772, whole
            genome shotgun sequence.
ACCESSION   DTVW01001362 DTVW01000000
VERSION     DTVW01001362.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2302)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2302)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2302
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_983772"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(83..1723)
                     /locus_tag="EYO87_18090"
                     /pseudo
     CDS             complement(83..1723)
                     /locus_tag="EYO87_18090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008535375.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family transposase"
     gene            complement(1771..2118)
                     /gene="tnpB"
                     /locus_tag="EYO87_18095"
     CDS             complement(1771..2118)
                     /gene="tnpB"
                     /locus_tag="EYO87_18095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008491906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family insertion sequence element accessory
                     protein TnpB"
                     /protein_id="HIC67865.1"
                     /translation="MIGPGTGVRVHPACGATDMRKGIGGLAALAQDVLRQKPTGGAVF
                     AFRGRKGDRLKLLYRDGQGFCLYYKVLERGRFPWPNTSSGAVRLTSAQLAMLWEGIDW
                     RRPDWGAPPARVG"
BASE COUNT          378 a          759 c          748 g          417 t
ORIGIN      
        1 gaggccacgc cggttcgcag cgagagcatg cacgaaatca gggagttgca catcgtaacc
       61 ggccggttgg caccgcggtt gatcaggcgg ccacggcctg agtgttggcc atcggcaccc
      121 agttcctcgg caagagttcg tcgagtcggt tgatcttgtg gtcatggatg cggtcgagca
      181 cgtcggcgag ataggcctgc ggatcgaggc cgttcagctt tgccgtctcg atgatcgtca
      241 tggcgcgggc cagcgtttcg ctgccggtgt cggcacccgc gaagagccag ttcttccggc
      301 caatgccgat cgggcgcagg gcgcgttcgg cgacattgtt gtcgattgcc acgcggccgt
      361 cggtgaggaa gaggctgaac gaggccctgc gggccagccc ctagcggaac gcgcgggcga
      421 ggtccccttt accggggatc cgcatgattt ggctttcgga ccaggcgaag aaggcctcga
      481 ccttcggggc gctgtgcttc tgccgcgcag ggaggcgtat ctcggcgggc tgcccgttga
      541 tttcacgctc aatgtcgtaa agcgcgccga tgcggtcgag cgcctcacgc gcgatagcgg
      601 atttcgtctt gtcccattcg tcatggaagt cacgccgcaa atgcgcccgg catgacgcct
      661 cctgcagacg gggcgtgccg tcggggtcgg gtgcataaag cttggcatag cccttgtagc
      721 cgtcggcctg caggatgccg cgggcctggg caagatggct ttggacgtgc tcttgcttcc
      781 agtccggggc gaagcggtag accgccgcgg gtggcgcggt tccggcccag ggtcgtggat
      841 cgcggacata ggcccagatc cgcccctgct tcaccccctt gccgaggccg cggtccttga
      901 gggaccggtt cagcaccctg atcggggtgt catcggcgtg gaggaggtcg ctggccatca
      961 catcggcctc gatgcgttcg accaagggcg tcagcacctt catcgcgcgc ccacaccaat
     1021 cgaccagcgt gctgtccggg atgtcggccc ccatgcgggc gaagatctcg ttcaggcgat
     1081 acaagggaag atggtcatcg aatttggaga cgaggatcca ggccggcagg gccgcgctcg
     1141 ccatgctgcc ggggatggga cggctgggtg ccggtgtttg caccatcttc tcacagcggc
     1201 ggcaggactt cttcagccgc gcgatctgca ggaccttcag ctgtgccgcg accaggtcga
     1261 gcatctcgct catgtcctcg cccacgagcc gcaggtcacc accgcaatcc gggcagcagc
     1321 tgccgggatc gagctcgcgc cgctcccgcg gggtcgcctc cgagatgcgg ggacgacggc
     1381 ggggtttgtg tttgtccaca tcgccagtct tcgcctcagg ggcaggatcc gcttcgtctt
     1441 cgtccgccag ggtggtggcg ctttcggcgc tggcgatgag cagatcctcg agggcaagtt
     1501 ccagctgcta gatctcgcgc tcgatcttct ccgaggactt gccgaaggcc tgcttcctga
     1561 gctttgcgat ccgcatttgc agcgtctgga tgagcaggtc atgcgccttg atcgtcgccg
     1621 ccatccttgc gttttccgcc tgcaaggcgg caatcatcgc cttcagaaca gcgggatctt
     1681 cgggaaggat gggcgtgtcg ctcgacatgc catcacctac catgatcgat caagtggcgc
     1741 catgaaaaca aggcgtttca ggcgggtaaa tcacccgaca cgggccggtg gcgcgcccca
     1801 atccggccgc cgccaatcaa tcccttccca taacatcgcc agctgtgccg aggtcagccg
     1861 caccgccccc gaactggtgt tcggccatgg aaagcgcccg cgctcgagga ccttgtagta
     1921 aagacagaac ccctggccgt cccggtaaag cagcttcagc cgatcaccct tgcggccccg
     1981 gaaggcaaag actgcaccgc cggtcggctt ctggcgcagc acgtcctgcg cgagcgccgc
     2041 cagccccccg atccccttgc gcatatccgt tgccccgcag gccggatgca cccgcacccc
     2101 ggttcccggc ccgatcatgc ggcatccacc gcgcggatca ggcgagacag cgccccatcg
     2161 tcgatgttgc tctcgaaccg aagcacacgg cccttcgcaa gccgcaactc aacccagacc
     2221 actggagtgg tggccggggt ttgatcctcc accacggtca actccatcgc gggcaccatg
     2281 ccggcgggca ggaacaacgc gc
//
LOCUS       DTVW01001363            1591 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_984139, whole
            genome shotgun sequence.
ACCESSION   DTVW01001363 DTVW01000000
VERSION     DTVW01001363.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1591)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1591)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1591
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_984139"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..348
                     /locus_tag="EYO87_18100"
     CDS             <1..348
                     /locus_tag="EYO87_18100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrolase"
                     /protein_id="HIC67866.1"
                     /translation="LDGADGPIYAGHESGYMIAGEGQVIYVSGDTDIMADMEWMGDYH
                     KPDIGILCAGGHFTMDMKRAAYAARRYFAFKTVIPCHYKTFPLLEQSAEALVADLPGV
                     MVIEPEVMKAIEL"
     gene            420..>1591
                     /locus_tag="EYO87_18105"
     CDS             420..>1591
                     /locus_tag="EYO87_18105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011910015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M24 family metallopeptidase"
                     /protein_id="HIC67867.1"
                     /translation="MKAACLDAFIVPRADSHQGEYVAEADARLAWLTGFTGSAGFAIV
                     TADKAGVFVDGRYRVQVKSQVDPAHFTPVPWPDTRPSDWLRDALPAGGRAGFDPWLQT
                     RKEIETMEKGLADSGIGLIAMDRNPLDAVWTDRPAPPVGRARAHDEALAGESAAGKRA
                     RLGAALRKDGQAAAFLSLPDSISWLLNIRGKDLPRNPVVQGFAVLSDDGHLALFADPA
                     KFDDGLRTTLGNAVSILHPESLSAALLDLEGPVRLDPATAPEAVFRLLEQAGTDIARA
                     PDPAILPKARKNSAELHGMRQAHLRDGVAMVRLLAWLEARDPASLTEIDVVRKLESLR
                     SDQGITDISFDTICGAGPNGAIVHYRVTETTNRRLSTGTMLLIDSGGQYPDGTTDIT"
BASE COUNT          273 a          533 c          522 g          263 t
ORIGIN      
        1 ctggacgggg cggacgggcc gatctatgcg ggccacgaat cgggctacat gatcgccggc
       61 gaggggcagg tgatctatgt cagcggcgat accgacatca tggccgacat ggaatggatg
      121 ggcgattacc acaagcccga tatcggcatc ctctgcgcgg gcggacattt caccatggac
      181 atgaagcggg cggcctatgc tgcgaggcgc tatttcgcct tcaagaccgt gattccctgt
      241 cattacaaga ccttccccct gcttgaacaa tcggccgagg cgctggtggc ggatctgccg
      301 ggggtcatgg tgatcgaacc cgaagtgatg aaggcgatcg aattgtgagc tttcagtcct
      361 ttgacgaccg ggccggtggc ggcgatcacg caggccggct ggccgcgctg cggcagcgga
      421 tgaaggccgc ctgtctcgat gccttcatcg tgccacgcgc cgattcgcat cagggcgaat
      481 atgtggccga agccgatgcg cggctagcct ggctgacagg cttcaccggc agcgcgggct
      541 tcgccatcgt tacggcggac aaggccggcg tcttcgtcga cggccgctac cgggtgcagg
      601 tgaaatcgca ggtcgatccg gcgcatttca cccctgtccc ctggcctgat acgaggccct
      661 cggactggct gcgcgacgcc ctgccggccg gagggcgggc cggcttcgat ccctggctgc
      721 aaacgcgcaa ggaaatcgag acgatggaaa aggggcttgc cgacagcggc atcggcctga
      781 tcgcgatgga ccgcaacccg ctcgatgccg tctggaccga ccgccctgcc ccgcccgtcg
      841 gccgggcccg tgcccatgac gaggcactgg cgggcgaaag cgccgccggc aaacgcgccc
      901 gtctgggtgc cgcgctgcgc aaggacggtc aggcggcggc ctttctgtcg ctgcccgatt
      961 cgatttcctg gcttctgaac atccgcggca aggatttgcc aaggaacccc gtggtgcaag
     1021 gctttgccgt cctgtccgat gacggccatc tggcgctgtt cgccgatccg gcgaaattcg
     1081 acgacggctt gcggacgacg cttggcaacg cggtttcgat cctgcacccc gagagcctgt
     1141 ccgccgccct gctggacctc gaaggcccgg tgcgcctcga ccccgcaacg gcgcccgagg
     1201 ccgtcttccg cctgctggaa caggccggaa ccgatatcgc ccgcgccccg gacccggcga
     1261 tcctgcccaa ggcccgcaag aattccgccg aactccacgg aatgcgccag gcgcatctgc
     1321 gcgacggcgt ggcgatggtg cggctgctgg catggttgga ggcgcgggat ccggcgtcgc
     1381 tgacggaaat cgatgtcgtc cgaaaactcg aatccctgcg atccgaccag ggcatcacgg
     1441 atatcagctt cgacacgatc tgcggcgcgg gccccaacgg cgccatcgtc cattaccgcg
     1501 tgaccgagac caccaatcgc cgcctctcga ccggcacgat gctgctgatc gattcgggcg
     1561 gccagtatcc cgacggaacc accgacatca c
//
LOCUS       DTVW01001364            1431 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_984294, whole
            genome shotgun sequence.
ACCESSION   DTVW01001364 DTVW01000000
VERSION     DTVW01001364.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1431)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1431)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1431
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_984294"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1142
                     /locus_tag="EYO87_18110"
     CDS             <1..1142
                     /locus_tag="EYO87_18110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011747557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="capsule biosynthesis protein"
                     /protein_id="HIC67868.1"
                     /translation="AEIYRIQSDIARRRRRRLFMLTLRLLLFVALPTALAGWYYFRVA
                     TPLYATFSQFQIQRAESASAGGAGGLLAGSQLATNPDSVAVQSYLNSRDAMLRLDTDK
                     GFKAAFQQPGIDPIKRLPLDASNEDAYATYRNSVKIGYDPTEGVIDMEVVAPDPALSE
                     QFSLALIRYAEEQVDRMTARLRSDQMEGAAESYRDAENKVLDAQRRVQELQQDLGVLD
                     PAAEGTVVMNQIATLEGQLSQKRLELGQLLANPRPQQSRVDAARGDISRLEKMIADTR
                     QQLTQGNEQRASLAAITGELRIAESDLATRQELLAAAAAQMEGARIEANKQVRYLSLS
                     VAPVPPDEATYPKAVQNTIVAFLIFSGIYLMLSLTVSILREQVST"
     gene            1139..>1431
                     /locus_tag="EYO87_18115"
     CDS             1139..>1431
                     /locus_tag="EYO87_18115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010399153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-8-phosphooctulonate synthase"
                     /protein_id="HIC67869.1"
                     /translation="MTTSRHIRIGPVTCGNDLPLTLIAGPCQLESLEHALMIAESMAE
                     ACRAAGAGFVFKASYDKANRTSLSGRRGLGIEEGLAILETVRVRIGCPVLTDV"
BASE COUNT          270 a          466 c          451 g          244 t
ORIGIN      
        1 cggccgaaat ttatcggatc cagagcgata tcgcgcgccg ccgccgccgc cgtctgttca
       61 tgctgaccct gcgcctgctg ctgttcgtgg cgctgcccac ggcgctggcg ggctggtatt
      121 atttccgcgt tgcgacaccg ctttacgcca ccttctcgca attccagata caacgggccg
      181 aatccgcctc ggcggggggc gccggcggtc ttctggccgg ttcgcagctt gccaccaatc
      241 ccgattccgt ggctgtgcaa agctatctga attcgcgcga tgcgatgctg cggctggaca
      301 ccgacaaggg cttcaaggcc gccttccagc agccgggcat cgatccgatc aaacggcttc
      361 ccctcgatgc cagcaatgaa gacgcctatg ccacctacag gaattcggtc aagataggct
      421 acgatccgac cgaaggcgtc atcgacatgg aggtggtcgc ccccgatccc gccctgagcg
      481 agcagttttc gctggcactg atccgatatg ccgaggaaca ggtggacagg atgaccgccc
      541 gcctgcgttc ggaccagatg gagggcgccg ccgaatctta tcgcgacgcc gagaacaagg
      601 ttctcgacgc gcagcggcgg gtccaggaat tgcaacagga cctgggtgtg ctggatccgg
      661 ccgccgaagg cacggtggtg atgaaccaga ttgccacgct ggaagggcaa ctgagccaga
      721 agcggctgga actgggtcag ttgctggcca atccgcgccc ccagcaaagc cgcgtggacg
      781 ccgcgcgcgg cgacatctcg cggctggaaa agatgatcgc cgatacccgc cagcaactga
      841 cccaaggcaa cgaacagcgc gcctctctgg cggcgatcac cggcgagctg cgcattgccg
      901 aaagcgatct ggcgacacgc caggaattgc tggccgcggc ggcggcgcag atggaaggcg
      961 cccggatcga ggccaacaag caggtccgct atctgtcgct ctcggtcgcc ccggttccgc
     1021 ccgacgaggc cacctatcca aaggcggtcc agaacaccat cgtggccttt ctgatctttt
     1081 cgggtatcta cctgatgctg tcgctgaccg tatccatcct gagagagcag gtttccacat
     1141 gaccacatca cgccacatcc gcatcggccc cgtgacctgc ggcaacgatc ttccgctgac
     1201 gttgatcgcg ggaccctgcc agctggaaag cctggaacac gcgctcatga tcgccgaaag
     1261 catggccgag gcttgccgcg cggcgggtgc gggcttcgtc ttcaaggcca gctacgacaa
     1321 ggccaatcgc acctcgctga gcggcaggcg cgggttgggg atcgaggagg gactggcgat
     1381 tctggaaacg gtccgcgtgc ggatcggctg cccggtcctg accgacgtgc a
//
LOCUS       DTVW01001365            1234 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_987176, whole
            genome shotgun sequence.
ACCESSION   DTVW01001365 DTVW01000000
VERSION     DTVW01001365.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1234)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1234)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1234
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_987176"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..414
                     /locus_tag="EYO87_18120"
     CDS             <1..414
                     /locus_tag="EYO87_18120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010395680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LuxR family transcriptional regulator"
                     /protein_id="HIC67870.1"
                     /translation="TGACRWSSLPIPDPFNILKDAADHGLTFGLTLSCGPISSRTIAS
                     FARDDREFIDDEIAEISTTVRRLHEITEPPASLTKAQKEALRCIAEGDRHAAAAAKLG
                     ITESAFKARLISVRERLKARTTAEALQRAKEYRLL"
     gene            477..1067
                     /locus_tag="EYO87_18125"
     CDS             477..1067
                     /locus_tag="EYO87_18125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010395678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acyl-L-homoserine lactone synthetase"
                     /protein_id="HIC67871.1"
                     /translation="MQTTTLSFSNLHNHGELFANLFRARKQSFIIQKNWDLPESEDME
                     FDQYDTPQSRWIAIHDRGEVLAGIRLTPTIARCGIYSYMIRDAQKGILGGSIPQDLLF
                     AEAPIDEQTWECSRVFVSHSIPQTYRRKVHFKMVEAMTGSARELGASRLIALTGATWP
                     RWYGRCGLDAEAIGRRMWIDDGDFQCVSIDLTPKMH"
BASE COUNT          245 a          381 c          389 g          219 t
ORIGIN      
        1 acgggggcct gtcgctggtc aagcctgccg atccctgatc ccttcaatat cctcaaggac
       61 gcggccgatc acggactgac cttcgggctg accctgtcct gcggcccgat ttcctcgcgc
      121 acgatcgcca gttttgcgcg cgacgacaga gaattcatcg atgacgagat cgccgagatc
      181 tcgaccaccg tacgtcggct tcacgaaatc acggagccgc cggcgagcct gaccaaggct
      241 cagaaagaag cccttcgttg catcgcggag ggcgatcgtc acgcagcggc ggcagccaaa
      301 cttggcatta ccgaaagcgc gttcaaggca cgtctgatct cggtccgcga aagattgaag
      361 gcccggacga ctgccgaggc gctgcagagg gccaaggaat accgtctgtt gtaggcgttt
      421 gcccagggga tccgtgaggc ggtgagggga cacctcacac cccaggagta cgtaaaatgc
      481 agacgactac actttccttc tcgaacctgc acaaccatgg cgaattgttc gccaatctgt
      541 tccgcgcccg caagcagagt ttcatcatcc agaagaactg ggatctgccc gaatccgagg
      601 atatggaatt cgaccagtat gatacgcctc aaagccgctg gatcgcgatc cacgaccgcg
      661 gcgaggttct ggcgggcatc cgattgacgc cgacgatcgc gcgctgcggt atctacagct
      721 acatgatccg cgatgcgcaa aagggcattc tgggcgggtc gatcccgcag gatctgctgt
      781 tcgccgaggc gcccatcgac gaacagacct gggaatgctc gcgcgttttc gtcagtcatt
      841 cgatcccgca aacctatcgt cgcaaggttc acttcaagat ggtcgaggcc atgaccggat
      901 cggcccggga actgggcgcg tcgcggctga tcgcgctgac cggggcgacc tggccgcgct
      961 ggtatggccg ctgcgggctg gatgccgagg cgatcggccg caggatgtgg atcgacgatg
     1021 gcgatttcca gtgcgtgtcg atcgacctga cgcccaagat gcactgatcc gaggcagtcg
     1081 aagggggctg ttcggcgcgg gtccgcgggc ctaggatggg cgccgaaatg gccgaccttt
     1141 tcgacacgcc cgcaaccgcc gagccgccgc aatcgccggc ggcaagacct ttggccgatc
     1201 gcatccgccc ggtgcgcatg gaggatgtga tcgg
//
LOCUS       DTVW01001366            3961 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_989003, whole
            genome shotgun sequence.
ACCESSION   DTVW01001366 DTVW01000000
VERSION     DTVW01001366.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3961)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3961)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3961
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_989003"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..520)
                     /locus_tag="EYO87_18130"
     CDS             complement(<1..520)
                     /locus_tag="EYO87_18130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011747564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-(3-hydroxymyristoyl)glucosamine
                     N-acyltransferase"
                     /protein_id="HIC67872.1"
                     /translation="MALTVGELARALDAQGWGDLSLPVTGAAEPANTVPVGPEGGLIA
                     MAMAPKYADGLKPGSMAILAQGMDPEEYGLRAAIFAPRPRLLLAGLTRTFDPGPDIAP
                     GIHPTAVIDPTARIGAGAAIGAFVVIGADVVIGQGARIASHVSVGRGARLGREALLRE
                     GARIGHGVSAGDR"
     gene            1110..1670
                     /locus_tag="EYO87_18135"
     CDS             1110..1670
                     /locus_tag="EYO87_18135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010399140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF882 domain-containing protein"
                     /protein_id="HIC67873.1"
                     /translation="MTMDLISRRGLMGVFAATTVTAAPVMANAFGFLRGAGDMRRVRM
                     YNGRTGESIDTVYWVNGKYIREALNEINIFMRDWRTGTAIGIDPRAMDVAAATHRLLQ
                     TNEPYMMLSGYRSPQTNAMLRRTSSGVAKNSLHMSGKAADMRLKSRSVAQMFKAAVAC
                     RAGGVGKYSRSNFVHMDCGPIRQWGA"
     gene            1874..2467
                     /locus_tag="EYO87_18140"
     CDS             1874..2467
                     /locus_tag="EYO87_18140"
                     /inference="COORDINATES: protein motif:HMM:PF00440.21"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HIC67874.1"
                     /translation="MPYRTRRYRAAKKIQAAAVELAVRDGLANVTTDAIARLAGVSTR
                     TFFNYYPYKEAAIMGPPPDYPAEASEEFVNGTGPLIEDLRVLITTHLGRFLREREMLG
                     HIFALAETDPKLEALRNSAILARRAQMRQLLQRRMPDADPRLVEILAAAIVAATNVAT
                     KDWITGEVDDFIAAARHNLALISTATAMLTGPAPGPT"
     gene            complement(2479..3096)
                     /locus_tag="EYO87_18145"
     CDS             complement(2479..3096)
                     /locus_tag="EYO87_18145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017929645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR family transcriptional regulator"
                     /protein_id="HIC67875.1"
                     /translation="MTDQPEPQRTRIQQKNRDLILEGALTVFSESGFRGATIDQIAEA
                     AGLSKPNVLYYFASKDEIHRTLLTTLLDLWLAPMLNLDPDGDPLDEVLGYVHTKLRMS
                     RDYPRESRLFAYEILQGAPHLGDILGGRLRDLVNDTVAILAGWIAAGRLSRVDPHHLI
                     FSIWALTQHYADFEVQVRAVLGPAQDPYVGADAYLDNLYRRMLAV"
     gene            3237..>3961
                     /locus_tag="EYO87_18150"
     CDS             3237..>3961
                     /locus_tag="EYO87_18150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008029627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HIC67876.1"
                     /translation="MPLDRKPAPNDLRAFWMPFTANRQFKAQPRMLVAASDMHYTAAD
                     GRAILDGTAGLWCCNAGHCRPRITEAVQAQIGQLDYAPAFQMGHPLAFELANRLVDIA
                     PDGIEHVFYCNSGSEAVDTALKIALAWHRARGDGARTRLIGRERGYHGVGFGGISVGG
                     IVNNRRFFGNLLTGVDHLSHTHLPRNAFTKGQPEHGADLADELERIIALHGAETVAAV
                     IVEPMAGSTGVLLPPKGYLQRLR"
BASE COUNT          722 a         1321 c         1230 g          688 t
ORIGIN      
        1 gcctgtcgcc ggcgctgaca ccatgaccga tccgcgcccc ttcgcgcagc aacgcctcgc
       61 gccccagccg cgccccgcgt ccgaccgaga catgcgaggc gatccgcgcg ccctgcccga
      121 tcaccacatc cgcgccgatc accacgaagg cgccgatcgc cgcaccggcg ccgatccgcg
      181 ccgtcgggtc gatcaccgcg gtggggtgga tgccgggcgc gatgtccgga ccgggatcga
      241 aggtgcgggt cagcccggca agcagcaggc gagggcgggg cgcgaagatc gcggcccgca
      301 gcccgtactc ctcgggatcc atgccctggg ccaggatcgc catgctgccg ggcttcaggc
      361 cgtcggcata tttcggcgcc atcgccatcg cgatcagacc gccctcggga ccgacgggga
      421 cagtgttcgc gggctcggcg gcgccggtca ccggcagcga cagatcgccc caaccctgcg
      481 cgtccagcgc ccgggcaagc tctccgacgg tcaaggccat gcgtcgtctc ctttcgctgg
      541 acagcgactt aatccttcac ggcgggttaa tccagacggc cctttccagg ggcccaggcg
      601 ccacggcgtc gcggatatgc gagccgcatc gcggcagatt tgatgatgtc gggccaagca
      661 acctttcgcc tgcaggttcc gttcgtggcg ctttggccac agacgcggcc ttgtcatgcg
      721 ccgtgatcgc gcggacaact tgcggttgaa ccgagctttc gcgacgcttt gccgcggttg
      781 ctgctgcagc ccgcgcccac agcaacgcgc ttttcggctg atatgacggg acaatctgcc
      841 gcgtccggtc cgttcaatcg agccagaggg aaatttcacc gccatcacat cggtcctgtt
      901 gccttgccgc aacgcttgcg atgacaattc gcaacacctc cgcaagatga gcgaatttct
      961 gcctatggtg gaaaaaacgc ccgctttcgc gaccaaagcg gtttcccgac gcacagcatt
     1021 ttgacatatt gttaggcaat cgagactaaa tctcgagaat gtcgcggaag aacgcggccg
     1081 caagaacgaa gcaggacagg cgatctgaca tgacaatgga cctcatctcc cgccggggac
     1141 tcatgggcgt attcgcggcc acgacagtca cggcggcacc cgtgatggcg aatgccttcg
     1201 gctttctccg tggcgcgggc gacatgcgtc gcgtgcgcat gtacaatgga cggactggcg
     1261 aaagcatcga caccgtttac tgggtcaacg gcaagtatat tcgcgaagca ctgaatgaaa
     1321 tcaatatctt catgcgcgat tggcgaaccg ggaccgcgat cggcatcgac ccgcgcgcga
     1381 tggatgtcgc cgcggcgacc cacaggctgc tgcagacgaa cgaaccctac atgatgctgt
     1441 cgggctatcg ttcgccgcag accaacgcga tgctgcgccg gacgtcttcc ggtgtcgcca
     1501 agaactctct gcacatgtcc ggcaaggctg cggacatgcg gctcaagtcg cgttcggtcg
     1561 cgcagatgtt caaggcggcg gttgcatgca gggcgggggg ggtcggcaaa tacagccgct
     1621 cgaacttcgt tcacatggat tgcggcccga tccgccaatg gggcgcgtga tccgggatcg
     1681 ttgccaatga tggcagacga aggcgccgct cgcggaaaac gcgggtggcg ccttcgtctt
     1741 cggcgccgcg cggcttcctc gcgcggagtt gcgtcttgcc ggcgcaattg tccggcctgc
     1801 gcacgcgagg cttgacccgc aagacgcatt ccaggacgct tcaacaacgc tttggaaacg
     1861 aacgggatcg tccatgcctt acagaacacg ccggtatcgt gcggccaaga agatccaggc
     1921 cgctgccgtc gaactggcgg tcagggacgg tctggcgaat gtcaccacgg atgcgatcgc
     1981 ccggcttgcc ggcgtcagca cccggacctt ctttaactac tatccctaca aggaggcggc
     2041 gatcatgggg ccgccgcccg attacccggc cgaggccagc gaggaattcg tcaacggcac
     2101 cggcccgctg atcgaggatc tgcgcgtgct gatcaccacc catctcggcc gctttctgcg
     2161 cgaacgcgag atgctgggcc acatcttcgc gctggccgaa acggatccca agctggaggc
     2221 cctgcgcaac agcgcgatcc tggcgcggcg tgcgcagatg cggcaattgc ttcagcggcg
     2281 gatgccggat gccgatcccc gtctggtcga aattctggcc gcggccatcg ttgccgcaac
     2341 caatgtcgcc accaaggact ggatcaccgg cgaggtcgat gatttcatcg cggcggcccg
     2401 ccataatctg gcgctgatct ctaccgcaac cgcgatgctg accgggccgg cgcccggccc
     2461 cacctgatcc ggcccgtcct agactgccag catccgacga tagagattgt ccagataggc
     2521 gtcggctccg acatagggat cctgggcagg gccaaggacc gcgcggacct gaacctcgaa
     2581 atccgcataa tgctgcgtca gcgcccagat cgagaagatc aggtggtgcg gatcgacccg
     2641 gctcagtcgc ccggccgcga tccagccagc cagaatcgcc acggtgtcat tgaccagatc
     2701 gcgcagcctg ccgccaagaa tatcgcccag atgcggcgca ccttgcaaaa tctcataggc
     2761 gaaaagccgg ctttcgcgag gataatcgcg cgacatccgc agcttggtgt gaacatagcc
     2821 cagaacctcg tccagcggat cgccgtcggg atccaggttc agcatcggcg ccagccacag
     2881 atccagaagc gtggtcagca gggtgcggtg gatctcgtcc ttcgaggcaa agtaatacag
     2941 gacgttcggc ttcgacaggc ccgccgcctc ggcgatctgg tcgatggtcg cgccgcggaa
     3001 accgctttcc gaaaagaccg tcagcgcgcc ctccaggata agatcgcggt tcttctgctg
     3061 gatcctggtc cgctgcggtt caggctgatc tgtcattggc aaatccgatc tggcatgatc
     3121 caaacttggg catcggggcc cgatttgtca tgcggcatct ctgcgtgctt gactggctct
     3181 ggccccgtgc tagcctgatc ctgacctttt ggtcaataat ttgcagaggt tccccgatgc
     3241 cgctcgaccg caagcccgcc ccgaacgacc tgcgtgcctt ctggatgccg ttcaccgcca
     3301 accgtcagtt caaggcgcag ccgcgcatgc tggtggcggc cagcgacatg cactacaccg
     3361 ccgccgatgg ccgcgcgatc ctggatggaa ccgcgggtct gtggtgctgc aacgcgggac
     3421 attgccggcc ccgcatcacc gaggcggtgc aggcgcaaat cggccaactg gattatgccc
     3481 ccgccttcca gatgggtcat ccgctggcgt tcgagctggc caaccgcctg gtcgatatcg
     3541 cgcctgacgg catcgaacat gtgttctact gcaattccgg cagcgaagcc gtcgataccg
     3601 ccctgaaaat cgcgctggcc tggcaccgtg cacgcggcga cggcgcgcgc acgcgcctga
     3661 tcggacgcga gcgcggctat cacggcgtcg gcttcggcgg catctcggtc ggtggcatcg
     3721 tcaacaaccg ccgcttcttt ggcaatctgc tgaccggcgt ggaccacctg tcccatacgc
     3781 atctgccccg gaacgccttc acgaaaggcc agcctgaaca cggcgccgat cttgcggatg
     3841 aactggaacg catcatcgcc ctgcatggcg ccgagaccgt cgccgcggtg atcgtcgagc
     3901 cgatggccgg ttccaccggc gtgctgctgc cgcccaaggg ttatctgcag cggctgcgcg
     3961 a
//
LOCUS       DTVW01001367            1780 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_992340, whole
            genome shotgun sequence.
ACCESSION   DTVW01001367 DTVW01000000
VERSION     DTVW01001367.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1780)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1780)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1780
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_992340"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..724)
                     /locus_tag="EYO87_18155"
     CDS             complement(<1..724)
                     /locus_tag="EYO87_18155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017998305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HIC67877.1"
                     /translation="MDDLWGQACAGLQDSVGTNNFNHWIRPLELAGIEDGVARFDSPT
                     RFISDWVNRHFATTILAELNRRGAGVERLRFAVVPKSGRSGGQRPRAAAPDPDQPAPA
                     ANTIRPAATARGTIRPDLGAPLDPRYTFANFVVGKPNELAHAAARRVAEGGPVGFNPL
                     FLYGGVGLGKTHLMHAIAHDYQANHPAAQILYLSAEQFMYRFVQALRESTIMDFKSMF
                     RNVNMLMVDDVQFIAGKDSTQEE"
     gene            complement(1277..1546)
                     /locus_tag="EYO87_18160"
     CDS             complement(1277..1546)
                     /locus_tag="EYO87_18160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011750739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S20"
                     /protein_id="HIC67878.1"
                     /translation="MANTPQSKKRARQTLRRTEVNKARRSRIRTFLRKVEEAIASGNA
                     DAAQEALKAAQPELMRGVSKGVYHKNTASRKMSRLSSRVKALSPA"
BASE COUNT          315 a          559 c          575 g          331 t
ORIGIN      
        1 attcctcctg cgtgctgtcc ttgccggcga tgaactgcac gtcatcgacc atcagcatgt
       61 tcacgtttcg gaacatgctc ttgaaatcca tgatggtgct ttcgcgcagc gcctgcacga
      121 agcgatacat gaactgctcg gccgacagat agaggatctg cgcagcgggg tggttggcct
      181 gataatcatg cgcgatggcg tgcatcaggt gggtcttgcc cagccccacg ccaccataga
      241 gaaacagcgg gttgaacccg accgggccgc cctcggccac gcggcgggcg gcggcatggg
      301 ccagttcgtt cggcttgccg acgacgaaat tggcaaaggt gtagcgcgga tccagcggcg
      361 cgcccagatc gggccgaatc gtgccgcgcg cggtggcggc gggccggatg gtgtttgccg
      421 ccggggccgg ctgatcgggg tccggggcgg cggcgcgcgg ccgctggccg ccgctgcgcc
      481 cgcttttcgg cacgacggca aagcgcagcc gctcgacccc cgcgccgcga cggttcagtt
      541 cggccagaat ggtcgtcgcg aaatgccggt tcacccagtc cgagatgaac cgcgtcgggc
      601 tgtcgaaacg ggccacgccg tcctcgatcc cggccagttc cagcggcctg atccagtggt
      661 tgaagttatt cgtcccgacg ctgtcctgaa gtcccgcaca tgcctgcccc caaaggtcgt
      721 ccatcgtctt tctgccccgt gctgtcctgt ccccgatctc cgccggatct gcatccggcg
      781 gaccaggatt cgcaccgccc cggggcagca tcgggcaaca ggccaccgtt gcggcccgaa
      841 cgggccgcat gacggggcag gatgcccgac gcagaataat agaccagatc cgcaggtgcc
      901 gatggcagcc gacagccacg gatccgtggg cagaagaaga gtgttctccg cttcgtcgcc
      961 cggccccgcc cggataaggt tccggaagcg gcggcctgtc ccccaaagcg acgtgaatcg
     1021 caggacagat ttagcaatag cggatcaacc cgcgcaaccg aactatgcgc ttgacagcgg
     1081 ctttccccaa tcgaatctgc gaggtctttg actcgaaaga agaaattgga aatggcattg
     1141 aaaattaacg atttattaac tgtttcgcag gtgcagaaaa aggcaaaggg cgcgtgccgg
     1201 tggcgcgcgc ccgttctgag attgctgtcc ttgtcaggcc ggaatacagc cttttccggc
     1261 cgccgcgccg atcggttcag gccggcgaca gggccttcac gcgcgatgac aggcgcgaca
     1321 ttttccgcga tgcagtattc ttgtgataga cgcccttgct gacgccgcgc atcagttccg
     1381 gctgcgccgc cttcagcgcc tcctgggcgg catcggcatt gcccgaggcg atggcttcct
     1441 cgaccttgcg caggaaggtg cggattcgcg accggcgggc cttgttgact tcggtgcggc
     1501 gcagcgtctg gcgcgcgcgc ttcttggatt ggggcgtatt tgccatgggc ttgatcctcg
     1561 tcgggtcttt cagcgttgcg gttgcacgaa agacccaagg cgaccgattc cccggaaggg
     1621 cggtcctgat tcttgcctaa gcgggcccac gcgcatgtaa gcgagggcct ataggtgatc
     1681 ggccgcgaaa agggaacccg aaaaatcagc ggtcgcggaa ttgcggctcg cgcttttcga
     1741 gaaaggcgga catgccttcc ttctgatcct cggtcgcgaa
//
LOCUS       DTVW01001368            3167 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_993692, whole
            genome shotgun sequence.
ACCESSION   DTVW01001368 DTVW01000000
VERSION     DTVW01001368.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 3167)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3167)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3167
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_993692"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..365)
                     /locus_tag="EYO87_18165"
     CDS             complement(<1..365)
                     /locus_tag="EYO87_18165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_352450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1178 family protein"
                     /protein_id="HIC67879.1"
                     /translation="MIRYSLRCDQGHDFDGWFRSSDAFETMRDSARLSCAQCGSTSVE
                     KTLMSPSVAAKTSRPLSAPVNPAQAALDRLRRHVEKNSDYVGLKFADEARAMHEGRSP
                     GRAIHGEARPDEAKKLIEDG"
     gene            complement(362..1594)
                     /locus_tag="EYO87_18170"
     CDS             complement(362..1594)
                     /locus_tag="EYO87_18170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017999235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-D-manno-octulosonic acid transferase"
                     /protein_id="HIC67880.1"
                     /translation="MIYAATTRLVEAALRLRVALGGQADLRQRLAIGAPPARCRIWFH
                     GASVGELQSGQEIILELARRLPVLVTANTETGRDLAAGWGLSARLAPLDSPAALSRFL
                     DAARPGLLVTLENEFWPLRSRMLAQRGIAQAMIGARMSARSAATWRRLPGIIGPMLTR
                     LAALSAQDAASETRLCDLGLDPACLLPRLDLKLLAPARITPPPDNRRRDRTILAASTH
                     EGEEATILDAWIAARRAHPDLRLILAIRHPRRGDEVAALIAARGLPVARVSRGAATAP
                     LLLADTLGEMPRWYDQAGICIVGGSLADRGGHTPWEPAAHRCAILHGPHVANFTESYG
                     ALHAQDAALAVTSTSLPAQIIGLAGDGARARALGRAARGVLEAEARDPSALIDRLANL
                     AQDRADHDIARMSKTEPR"
     gene            complement(1763..1836)
                     /locus_tag="EYO87_18175"
     tRNA            complement(1763..1836)
                     /locus_tag="EYO87_18175"
                     /product="tRNA-Cys"
                     /inference="COORDINATES: profile:tRNAscan-SE:1.23"
                     /anticodon=(pos:complement(1802..1804),aa:Cys,seq:gca)
     gene            1961..2614
                     /locus_tag="EYO87_18180"
     CDS             1961..2614
                     /locus_tag="EYO87_18180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011749001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate O-methyltransferase"
                     /protein_id="HIC67881.1"
                     /translation="MTDFAARRTMMVDTQVRPNDVTKFPVIEAMLAVPREEFVPAGRR
                     AVAYSGENLDIGRGRVLLEPRTLAKMVDALDIQPDDLILDLGCGYGYSAAVMARMAEA
                     VVAIEDDADMAAEAERRLAEADVFNVAVLEGPLSEGAARQGPYDAILIEGAVQQVPAA
                     IEDQLKEGGRIAALFDEGRLGVVRIGHRLNDRVNWRYAFNAHAPLLPGFTRERRFSL"
     gene            2707..>3167
                     /locus_tag="EYO87_18185"
     CDS             2707..>3167
                     /locus_tag="EYO87_18185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010391909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter"
                     /protein_id="HIC67882.1"
                     /translation="MVAAYRDSALMDQNRAVLRAADEDVASAIAQLRPVVQWIASHDV
                     QQSEGGLTTRSTSLQIGAEMTLYDWGRSQLAIDSAKEQVMATRQALVNVEQNVLLDAT
                     ASFFEVRRATEQVALQQNSVGVLSRERQAAQDRFDVGEITVTDVALADAQLA"
BASE COUNT          515 a         1048 c         1093 g          511 t
ORIGIN      
        1 ccgtcctcga tcagcttttt cgcctcgtcc gggcgcgcct cgccgtggat ggcgcggccc
       61 ggactgcggc cttcatgcat ggcgcgcgcc tcgtcggcga atttcagtcc gacataatcg
      121 gaattcttct cgacatggcg gcgcagtcgg tccaatgcgg cctgggccgg attgacgggc
      181 gcggacaggg gtctggacgt ctttgctgcc accgaagggc tcatcagggt cttttcaaca
      241 ctggtcgatc cgcattgcgc gcaggacagc cgcgccgagt cgcgcatcgt ctcgaacgca
      301 tcggacgaac gaaaccagcc atcgaaatca tggccctggt cgcagcgcag gctgtagcgg
      361 atcatcgcgg ctccgtcttg ctcatgcggg ctatatcgtg atccgcgcgg tcctgcgcaa
      421 gattggcgag cctgtcgatc agcgccgacg ggtcgcgcgc ctccgcctcc agcactccgc
      481 gtgcggcccg gcccagagcg cgggcacggg cgccatcgcc cgccaggccg atgatctgcg
      541 ccggaagtga cgtgctggtc accgccagtg ccgcgtcctg agcatgaagc gcgccatagc
      601 tttcggtgaa attcgcgaca tgcgggccat gcagaatggc gcagcgatgg gccgccggtt
      661 cccagggcgt gtggccgcca cgatcggcca gcgacccgcc gacgatgcag attcccgcct
      721 ggtcatacca gcgcggcatc tcgcccaacg tgtcggccag cagcagcggc gctgtcgcgg
      781 cgccccgcga aacgcgggcg acgggcaggc cgcgggcggc gatcagcgcc gcgacctcgt
      841 cgccgcgccg ggggtgacgg atggccagga tcaggcgaag gtcgggatgc gcgcggcggg
      901 ctgcaatcca ggcgtcgagg atcgtggcct cctcgccctc gtgggtcgag gcggcaagga
      961 tggtccggtc gcgccgccgg ttgtcggggg gcggggtgat ccgcgccggt gccagcaatt
     1021 tcaggtcgag gcgcggcaac aggcacgcgg ggtcgagccc caggtcgcac agccgcgtct
     1081 cgctggccgc gtcctgcgcc gaaagcgcgg caaggcgggt cagcatcgga ccaatgatgc
     1141 cgggcagccg ccgccatgtc gccgccgaac gggccgacat ccgtgcgccg atcatggcct
     1201 gcgcgatccc ccgttgcgcc agcatccgcg accgaagcgg ccagaattcg ttttccagcg
     1261 tcaccagcag acccggccgc gccgcgtcta ggaaacgcga cagcgccgcg ggcgaatcca
     1321 gcggagccag ccgggcggaa aggccccagc ctgccgcaag atcccggccg gtttcggtat
     1381 tggcggtgac aagcaccggc aggcgccggg ccagttccag gatgatctcc tgtccggact
     1441 gcaactcgcc caccgaggcg ccgtggaacc agatccggca gcgggcgggc ggggcgccga
     1501 tcgccagccg ctgccgcaag tcggcctggc cgcccaacgc gacccgcagc cgcaaggcgg
     1561 cttcgacaag gcgggtcgtg gcggcataga tcatcggctt cgtctcgcgg cggttctcgc
     1621 ggccggtagt cggaatgccg ccattccctc ctaggcggca ggcgggcgca agtaaatgtg
     1681 ccccaccccg gaccggaagg tgcagaaagg gcccggccac ccttgccggg caggaatgct
     1741 gcgcgtcgat catgggactt tctggaggtg ggtaccggaa tcgaaccggt cttcacggat
     1801 ttgcaatccg gtgcgtaacc actccgccaa cccaccgatc ttcagagtgc gaatgattta
     1861 gtggatcggc gctgacggcg caagacggga atgagcggcg ttgcccgcat cccggaatcg
     1921 tggcagtaag cagacaaagc aggtcgcata agggcccgac atgaccgatt tcgccgcgcg
     1981 ccgcaccatg atggtggata cccaggttcg tcccaacgat gtcacgaaat tcccggtgat
     2041 cgaagcgatg ctggctgttc cccgcgagga attcgttccc gccggccgcc gcgccgtggc
     2101 ctattccggc gagaatctgg atatcggtcg cggccgtgtc ctgctggagc cgcggacact
     2161 ggccaagatg gtggacgcgc tggacatcca gccggatgac ctgattcttg atctggggtg
     2221 tggatatggg tattccgcgg ccgtgatggc gcgcatggcc gaggcggtcg tcgccatcga
     2281 ggacgacgcc gacatggccg ccgaggccga acgccggctg gccgaggccg acgtcttcaa
     2341 cgtcgccgtg ctcgagggac cgctatccga aggcgcagcg cgtcaagggc cctatgacgc
     2401 catcctgatc gagggcgcgg tccagcaggt tccggccgcc attgaagacc agttgaagga
     2461 aggcggccgc atcgcggctc tgttcgacga gggacggctg ggcgttgtcc gcatcggcca
     2521 tcgcctgaac gaccgcgtga actggcgcta tgccttcaac gcccatgccc cgctcttgcc
     2581 gggctttacc cgcgaacgga ggttcagcct gtgatctttc gcacctgttt tcgcgcgctt
     2641 gtcctgtcat cgatcctggg cggcgcgatc gcccttcccg cgcgcgccca gtccctggcc
     2701 gacacgatgg ttgcggccta tcgcgattcg gcgctgatgg atcagaaccg ggccgtgctg
     2761 cgggcggcgg acgaggatgt cgccagcgcg atcgcccagc ttcgccccgt ggtccagtgg
     2821 atcgccagcc atgacgtgca gcaaagcgag ggcgggctga cgacgcgatc gacctcgttg
     2881 cagatcgggg ctgaaatgac gctctacgac tggggccgat cgcagcttgc catcgattcc
     2941 gccaaggaac aggtgatggc cacgcggcag gcgctggtga atgtcgaaca gaacgttctg
     3001 cttgatgcca cagcctcctt tttcgaggtt cgccgcgcca ccgagcaggt ggccttgcag
     3061 cagaattcgg tcggggttct gtcgcgcgaa aggcaggccg cgcaggatcg ctttgacgtg
     3121 ggcgagatca ccgtgaccga tgtggccctg gccgatgcgc aactggc
//
LOCUS       DTVW01001369            2698 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_999319, whole
            genome shotgun sequence.
ACCESSION   DTVW01001369 DTVW01000000
VERSION     DTVW01001369.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 2698)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2698)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2698
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_999319"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            65..517
                     /locus_tag="EYO87_18190"
     CDS             65..517
                     /locus_tag="EYO87_18190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005980500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HIC67883.1"
                     /translation="MTDYDALSARIGALARGETDEVALMATLACEIHHADDRFDWTGF
                     YRVAGPELLKIGPYQGGHGCLVIPFSRGVCGAAARTGRVQLVSDVADFPGHIACAAST
                     RSEIVLPVFGRAGRLIGVLDIDSDQPDAFTPEDARRLELILAEVFGGL"
     gene            638..1264
                     /locus_tag="EYO87_18195"
     CDS             638..1264
                     /locus_tag="EYO87_18195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011749080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysE family translocator"
                     /protein_id="HIC67884.1"
                     /translation="MIWETIANIPLAQMMAFIAGGLVLNFAPGQDVFFASACGIQGGP
                     RAGALAGLGVGLGVMMHVTLATVGLGAVVAAHPGALRAIKYAGAAYLLWLAWKSWRAG
                     PVNPAARGSVRPWNIIRRGFLSNALNPKPVLFLLAFLPQFTSVAWGPIWQQILGLGLI
                     FVFTGTLVTIGYGVVGGYAGHVIGRRLGVVNKIAAVMFAGLAIRLIAK"
     gene            1261..1917
                     /locus_tag="EYO87_18200"
     CDS             1261..1917
                     /locus_tag="EYO87_18200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009570593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA pseudouridine synthase"
                     /protein_id="HIC67885.1"
                     /translation="MSQADFVYAPPSEAPTIIHADHEILVVAKPAGLLSVPGRGPDRA
                     DCLIARLRGPFPTILLVHRLDLDTSGVMVFALTPHAQRHLSKQFEDRRVKKAYVARVA
                     GLVQPRTGRVDLPLIVDWPNRPRQKVDRDRGRPAQTDWRVMRALADETRLRLFPLTGR
                     SHQLRVHMAEIGHPILGDPLYATGAARGHPRLMLHAESLRFRHPDSGIQQTFSVKPPF
                     "
     gene            complement(1921..2640)
                     /locus_tag="EYO87_18205"
     CDS             complement(1921..2640)
                     /locus_tag="EYO87_18205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007425666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HIC67886.1"
                     /translation="MPRILLAQDKASASFRFPVEGGEVVVYPVEHASMVIETPGGVIY
                     VDPVGGAEKFSGMPAPSLILITHQHGDHYDQPTLEALPAVRLITNPAVNEMLPDAMKE
                     RATAMENGDSAQALDMRIEAIPAYNTTPERMQYHPEGRDNGYVLTIGGSRFYIAGDTE
                     PVPEMAALENIEVAFLPMNLPYTMTIEQAAEAVATFKPKTVFPYHHRGSDVQAFAQLV
                     EAGDSGAKVVIADWYPNGQGA"
BASE COUNT          409 a          836 c          952 g          501 t
ORIGIN      
        1 aggtatttgg aaagagtgcg agggtgggct tttcgtgccg tggcgggcgg cgtagagagg
       61 gcgaatgaca gattacgacg cactttccgc ccggatcggg gcgctggccc ggggcgagac
      121 cgacgaggtt gcgctgatgg cgacgctggc ctgcgaaatc catcatgcgg acgaccgttt
      181 cgactggacc gggttctatc gcgtggccgg cccggaattg ttgaagatcg gtccctacca
      241 gggcgggcat ggctgtctgg tgattccctt ctcgcgcggg gtttgcgggg cagcggcgcg
      301 gacaggcaga gtgcagctgg tgtccgatgt cgccgatttt cccggccata tcgcctgcgc
      361 cgcctcgacc cgatcagaga tcgtgttgcc ggttttcggc cgcgccgggc ggctgatcgg
      421 ggttctcgac atcgacagcg accagcccga tgccttcacc cccgaggatg cgcgacgtct
      481 ggagctgatt ctggcggagg tgtttggtgg gctctgatat gttggtgcgg ttttccggcc
      541 gggtcggaac gcccgagcca aggggaggcc aacgcggcct gcgccggcac gtccggccga
      601 ggttcggcgg cgaggttcgc gacccggtgt ggccgacatg atctgggaga ccatcgccaa
      661 tattcccctt gcgcagatga tggccttcat cgcgggcggg ctggtgctga atttcgcccc
      721 cggccaggat gtgttcttcg ccagcgcctg cgggatccag ggcggaccca gggccggggc
      781 gctggccggt ctgggcgtcg gtctgggcgt catgatgcat gtgacgctgg cgaccgtagg
      841 tctgggcgcg gtggtcgcgg cccatcccgg cgcgctgcgg gccatcaaat atgcgggcgc
      901 ggcctatctg ctgtggctgg cctggaaaag ctggcgggcg gggccggtca atcctgccgc
      961 gcggggcagc gtcaggccgt ggaacatcat ccggcgcggc tttctgtcga atgcgctgaa
     1021 ccccaagccg gtgctgttcc tgctggcgtt cctgccgcaa ttcaccagcg tcgcctgggg
     1081 cccgatctgg cagcagatcc tggggctggg cctgatcttt gtcttcaccg ggacgctggt
     1141 gaccatcggc tacggcgtcg tcggcggcta tgcgggccat gtcatcgggc gtcgtctggg
     1201 cgtggtcaac aagatcgccg ccgtcatgtt cgcggggctg gcgatccggc tgatcgcgaa
     1261 atgagtcagg cggatttcgt ctatgctccg ccttccgagg cgcccacgat catccatgcc
     1321 gatcacgaga tcctggtggt ggccaagccc gccggtctgc tgtcggtgcc ggggagagga
     1381 ccagaccgcg ccgattgcct gatcgcgcgg ctgcgcggtc cctttccgac aatccttctg
     1441 gtgcaccggc tggatctgga cacctcgggc gtgatggtct ttgcgctgac gcctcatgcc
     1501 cagcggcacc tgtcgaagca attcgaggac cggcgggtca agaaagccta tgtcgcgcgg
     1561 gtcgcggggc tggtgcagcc caggaccggc cgggtcgacc tgccgctgat cgtcgattgg
     1621 ccgaaccggc cgcgccagaa ggtcgatcgc gatcggggcc gcccggcgca gaccgactgg
     1681 cgggtgatgc gcgccctggc cgacgagacg cggctgcgac tgttcccgct gacagggcgc
     1741 agtcatcaat tgcgcgtcca catggccgaa atcggccatc cgatcctggg cgatccgctt
     1801 tatgcaacag gggcggcgcg cggccacccg cggctgatgc ttcatgccga aagcctgcgg
     1861 ttccggcatc cggacagcgg catccagcag acgttttcgg tcaagccgcc gttctgatcg
     1921 tcaagcgccc tgaccgttcg gataccagtc cgcgatcacg accttggcgc cggaatcacc
     1981 ggcttcgacc agttgcgcaa aggcctgcac gtcgctgccg cgatgatgat aggggaaaac
     2041 ggtcttcggc ttgaaggtcg ccaccgcctc ggcggcctgt tcgatggtca tcgtataggg
     2101 caggttcatc ggcaggaaag cgacctcgat attttccagc gcggccattt ccggcaccgg
     2161 ctcggtatcg ccggcgatgt agaaacggct gccgccgatg gtcaggacat agccattatc
     2221 gcgaccctcc ggatgatact gcatccgctc cggggtggtg ttgtaggccg ggatcgcctc
     2281 gatccgcatg tccagcgcct gggctgaatc gccgttctcc atcgctgtcg cgcgttcctt
     2341 catggcatcg ggcagcatct cgttgactgc gggattggtg atcaggcgga cggccggcag
     2401 cgcctccagc gtcggctggt cgtaatgatc gccatgctgg tgggtgatca ggatcagcga
     2461 cggcgcgggc atgccggaaa atttttccgc gccgccgacc ggatcgacat agatcacgcc
     2521 gccgggcgtc tcgatcacca tcgaggcgtg ttcgaccgga taaacgacga cctcgccgcc
     2581 ctccacggga aagcggaagg acgcggacgc cttgtcctga gccagcagga tgcggggcag
     2641 cgccgaggcg ccaagcgcga gggcagcggt cgtgagaccg gaacggcggg tgaaatgc
//
LOCUS       DTVW01001370            1295 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_999749, whole
            genome shotgun sequence.
ACCESSION   DTVW01001370 DTVW01000000
VERSION     DTVW01001370.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1295)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1295)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1295
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_999749"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>1295
                     /locus_tag="EYO87_18210"
     CDS             <1..>1295
                     /locus_tag="EYO87_18210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011046421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="error-prone DNA polymerase"
                     /protein_id="HIC67887.1"
                     /translation="ILCQGRGSAANSILCYLLGITDVSPDLIGMVFERFISRHRGEPP
                     DIDVDFEHERREEMIQWIYGKYGRHRAGLCATVIHFRSRAAIREVGKVMGLSGDVTAA
                     LSGQIWGMSNAGADPERMRELGLDPRDRRLSQTIRLIREIIGFPRHLSQHVGGFVITR
                     GRLDELCPVENAAMEDRTVIGWDKDDIDALNILKVDVLSLGMLTCIRKSFDLLESHEG
                     IRHSLGSVPQGDEPTYRMLQQANAVGVFQVESRAQMNFLPRMKPREFYDLVIEVAIVR
                     PGPIQGGMVKPYIRRRQGLEKAEPFGPALAEVTRRTLGVPLFQEQAMQIAIVGAGYSA
                     EEADRLRRSLASFRRMGTIGEHRERFVQGMLSNGYDREVAEQCFSQIEGFADYGFPES
                     HAAAFAMLTYVSSWLKCHHPAIFACALLNSQPMGFYAPA"
BASE COUNT          220 a          396 c          430 g          249 t
ORIGIN      
        1 atcctgtgcc aggggcgcgg ctcggccgcc aattcgatcc tgtgctacct gctgggcatc
       61 accgatgtca gccccgatct gatcggcatg gtcttcgaac gcttcatctc gcgccatcgc
      121 ggcgagccgc ccgatatcga cgtggatttc gaacatgagc gccgcgaaga gatgatccag
      181 tggatctacg ggaaatatgg ccgccatcgc gcgggccttt gcgccacggt gatccatttc
      241 cgttcgcgcg cggcgatccg cgaggtgggc aaggtgatgg gattgtccgg ggacgtgacc
      301 gccgcgctgt cgggccagat ctgggggatg tcgaacgcgg gcgcggatcc cgaacggatg
      361 cgcgaactgg gtcttgatcc gcgggatcgc cgcctgtcgc agacgatccg cctgatccgc
      421 gagatcatcg gttttccgcg ccatctgtcc cagcatgtcg gcggtttcgt catcacccgg
      481 gggcggctgg acgaattgtg tccggtcgag aatgcggcga tggaggaccg caccgtcatc
      541 ggctgggaca aggacgatat cgacgcgctg aacatcctga aggtcgatgt cctgtcgctg
      601 gggatgctga cctgcatccg caagagcttt gaccttttgg aaagccacga aggcatccgt
      661 cacagcctcg gttcggtgcc gcagggggac gagccgacct accggatgct gcaacaggcc
      721 aatgcggtgg gcgtctttca ggtcgaaagc cgggcgcaga tgaatttcct gccgcggatg
      781 aagccgcgtg aattctacga cctggtgatc gaggtcgcca tcgtccgccc cggcccgatc
      841 cagggcggca tggtcaaacc ctatatccgc cgccgtcagg ggctggagaa agccgaacct
      901 ttcggcccgg ccttggccga ggtgacgcgg cggaccctgg gggtgcccct gtttcaggaa
      961 caggccatgc agatcgccat cgtcggtgcg ggctatagcg ccgaagaggc cgaccgcctg
     1021 cgccgctcgc tggcctcgtt ccggcgcatg ggcacgatcg gcgagcatcg cgaacgcttt
     1081 gtgcagggga tgctgtcgaa cggctatgac cgcgaggtgg cagaacaatg tttctcgcag
     1141 atcgaggggt ttgccgatta cggctttccc gaaagccacg cggcggcctt cgcgatgctg
     1201 acctatgtct cgtcatggct gaaatgccat catccggcga tctttgcctg cgcgttgctg
     1261 aattcgcagc cgatggggtt ttacgccccc gccca
//
LOCUS       DTVW01001371            1179 bp    DNA     linear   ENV 04-MAY-2020
DEFINITION  MAG TPA_asm: Paracoccus sp. isolate UWMA-0144 k99_999849, whole
            genome shotgun sequence.
ACCESSION   DTVW01001371 DTVW01000000
VERSION     DTVW01001371.1
DBLINK      BioProject: PRJNA522654
            BioSample: SAMN10967491
            Sequence Read Archive: SRR8626156
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Paracoccus sp. (marine metagenome)
  ORGANISM  Paracoccus sp.
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
            Rhodobacteraceae; Paracoccus.
REFERENCE   1  (bases 1 to 1179)
  AUTHORS   Zhou,Z., Tran,P.Q., Kieft,K. and Anantharaman,K.
  TITLE     Genome diversification in globally distributed novel marine
            Proteobacteria is linked to environmental adaptation
  JOURNAL   bioRxivorg, doi 10.1101/814418 (2019)
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1179)
  AUTHORS   Zhou,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2019) Department of Bacteriology, University of
            Wisconsin-Madison, 4545 Microbial Sciences Building, 1550 Linden
            Drive, Madison, WI 53706, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.17x
            Sequencing Technology  :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/20/2019 16:38:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,645
            CDSs (total)                      :: 3,631
            Genes (coding)                    :: 3,503
            CDSs (with protein)               :: 3,503
            Genes (RNA)                       :: 14
            tRNAs                             :: 12
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 27 of 128
            Pseudo Genes (incomplete)         :: 102 of 128
            Pseudo Genes (internal stop)      :: 8 of 128
            Pseudo Genes (multiple problems)  :: 9 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1179
                     /organism="Paracoccus sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k99_999849"
                     /isolate="UWMA-0144"
                     /isolation_source="Dilute Hydrothermal Plume"
                     /db_xref="taxon:267"
                     /environmental_sample
                     /country="Atlantic Ocean: Mid Cayman Rise"
                     /lat_lon="18.37636666 N 81.79808333 W"
                     /collection_date="2012-01-18"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..179)
                     /locus_tag="EYO87_18215"
     CDS             complement(<1..179)
                     /locus_tag="EYO87_18215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005630508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HIC67888.1"
                     /translation="MTHFLDLNTTARGDLRSIIDQAIAMKTARGGRPKGTPDDDLPLA
                     GRMVALIFEKPSTRTR"
     gene            complement(298..792)
                     /locus_tag="EYO87_18220"
     CDS             complement(298..792)
                     /locus_tag="EYO87_18220"
                     /inference="COORDINATES: protein motif:HMM:PF13302.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HIC67889.1"
                     /translation="MRPTAFMPDYGFRPVTAADLPMLAEWLRVPQVARWWPDAERQLA
                     LIRAERRAAPMRQLIALRGDTPLGYAQCYPAFHWPAPHFAGLPQDSIALDVFGAPAGR
                     GQGGAWLRALGDLLLQDGSTLVIDPAPENLRAIRAYEKAGFSGLRIATDSEGQSVLVM
                     ARRR"
     gene            complement(767..>1179)
                     /locus_tag="EYO87_18225"
     CDS             complement(767..>1179)
                     /locus_tag="EYO87_18225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008884017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HIC67890.1"
                     /translation="LATENAASAMVAGSHGSTYGGNPLACAVGAAVMRIVADPAFLAE
                     VNRKAGLFRQKLEALVAAHADIFESVRGQGLMLGLKCRIAPTDLVKAGYARRILTVPA
                     ADNTLRLLPPLNITDDEIAEAVTRLDHAADSLHA"
BASE COUNT          184 a          408 c          407 g          180 t
ORIGIN      
        1 cgggtccggg tcgagggctt ttcgaagatc agcgccacca tccggccggc cagcggcaga
       61 tcgtcgtcgg gcgtgccctt gggacggccg cccctggcgg tcttcatggc gatggcctga
      121 tcgatgatcg accgcagatc gcccctggcg gtcgtgttca ggtccagaaa atgcgtcatc
      181 gtgaactctt tcggatttgg gccagcaagc ccgcttgcga gggcggggtc aagggggcgc
      241 cgcccccgcc gcgcgggcgc gcggcccccc ggggtattgg ggcaacgaag aaacccccta
      301 tcgtcggcgc gccatcacga ggacgctttg gccttcgctg tcggtggcga tccgcaggcc
      361 cgaaaatccg gccttttcat aggcgcggat cgcgcgcagg ttttcggggg ccgggtcaat
      421 caccagggtc gagccgtcct gcagcagcag atcgccaagc gcgcgcagcc atgccccgcc
      481 ctgcccccgc cccgccggcg cgccgaacac gtcaagggcg atgctgtcct ggggcaggcc
      541 ggcaaaatgc ggcgcgggcc agtgaaatgc cggataacat tgcgcatagc caagcggggt
      601 gtcgcccctc agcgcgatca gctgccgcat cggcgccgcc cgccgttccg cgcggatcag
      661 cgcaagctgg cgttccgcgt ccggccacca tcgtgccacc tgcggaacgc gcagccattc
      721 ggccagcatc ggcagatcgg ccgcggtcac gggacggaag ccgtagtcag gcatgaaggc
      781 tgtcggccgc atggtccagc cgcgtcaccg cctcggcgat ctcgtcgtcg gtgatgttca
      841 gcggcggcag caggcgcagg gtgttgtcgg cagcgggcac ggtcaggatc cgccgggcgt
      901 agcccgcctt gaccagatcg gttggcgcga tcctgcattt cagacccagc atcaggccct
      961 gcccgcgcac ggattcgaag atgtctgcat gagccgcgac cagcgcctcc agcttctggc
     1021 ggaacaggcc ggccttgcgg ttgacctcgg ccagaaaggc cggatcggcc acgatccgca
     1081 tcaccgccgc accgaccgcg caggccaggg gattgccgcc ataggtcgag ccatggctgc
     1141 ccgcgaccat ggccgatgcg gcgttttcgg tggccagaa
//
